RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy10988
(1857 letters)
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common
bacterial type. SMC (structural maintenance of
chromosomes) proteins bind DNA and act in organizing and
segregating chromosomes for partition. SMC proteins are
found in bacteria, archaea, and eukaryotes. This family
represents the SMC protein of most bacteria. The smc gene
is often associated with scpB (TIGR00281) and scpA genes,
where scp stands for segregation and condensation
protein. SMC was shown (in Caulobacter crescentus) to be
induced early in S phase but present and bound to DNA
throughout the cell cycle [Cellular processes, Cell
division, DNA metabolism, Chromosome-associated
proteins].
Length = 1179
Score = 81.3 bits (201), Expect = 4e-15
Identities = 146/755 (19%), Positives = 320/755 (42%), Gaps = 64/755 (8%)
Query: 581 AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKD 640
+LTAE + L+E++ L E EL++++E+ ++ L EI +LE+ ILRE+L
Sbjct: 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA--- 312
Query: 641 QVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQT 700
++ +E+ L +++EL +KL + + + + + + L + E L+ + E++ + E
Sbjct: 313 NLERQLEE-LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
Query: 701 GKDSVDIDTLIKNLQSK-KEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTL 759
+ +++ ++ L+SK + ++ N ++ ++ E LE + + L ++ + L
Sbjct: 372 SR-LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
Query: 760 IQS-KNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEK--- 815
++ +L+A++ EL E+ L + + E ++++ ER L +
Sbjct: 431 EEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQAR 490
Query: 816 ---LKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAP 872
L+ E ++E ++A L+ L +EL++ E E A+ AA
Sbjct: 491 LDSLERLQENLEGFSEGVKALLKNQSGLSGILGVL-SELISVDE-----GYEAAIEAALG 544
Query: 873 VD-DNIVIEN-QQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQY 930
+V+EN K+ + +KQ V L L + K EI E+ +E
Sbjct: 545 GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLP-LDSIKGTEIQGNDREILKNIEGFLGV 603
Query: 931 EDKCIELESTLDAKLTDF-----------STKEQLNKNKMAELSAML--ESVQAENISIK 977
++ + L L+ + E K + L + V+ +
Sbjct: 604 AKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITG 663
Query: 978 QMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVK 1037
+ ++ E EE + ++E ++++ EL+ LAE + + LE K
Sbjct: 664 GSAKTNSSILE----RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK 719
Query: 1038 ELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDT 1097
EL++ R + + +L + ++V +LE+ A+L E T+ E E L + + +L
Sbjct: 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE 779
Query: 1098 YNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVM 1157
A+I +E ++ ++K +++ L EL ++ + + L+ L+SL+ +
Sbjct: 780 AEAEI---EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIA-- 834
Query: 1158 KSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATI 1217
+ L + + +E +++ + ++++ + E+ + +L L R +
Sbjct: 835 --------ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE 886
Query: 1218 ATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEK----------H 1267
L + L+E ++ SE+ ++ E + L +++ LE
Sbjct: 887 EALAL--LRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
Query: 1268 LSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNE 1302
LSE+Y E E +E +E + ++ L
Sbjct: 945 LSEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
Score = 70.1 bits (172), Expect = 9e-12
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 29/312 (9%)
Query: 1423 KLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEAD 1482
++++L ++ LE+++ + LA ++L E +E+L + +LEE+++ +S
Sbjct: 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQIS-------- 729
Query: 1483 GEPAQEREVVAQHVAPVETSRERNE-LALRLQNLQEEKTMLLTEINDLRLNQNTLYNENE 1541
R+ +A+ A VE ER L+ L L+ E L + + E E
Sbjct: 730 ----ALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE 785
Query: 1542 RLKQHLLKTEED---NTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVE 1598
L+ + + +E+ L + + L+ + ER++S +++
Sbjct: 786 ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLE-----------RRIA 834
Query: 1599 ALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQ 1658
A +++ L EQ E+L E + +++ + + L+ LE E+ + ++L L+
Sbjct: 835 ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERA-SLEEALALLR 893
Query: 1659 GELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQE-LTEKVNQLM 1717
EL + EL S L+ +L+E RE L+ + L + +QE L+E+ + +
Sbjct: 894 SELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTL 953
Query: 1718 EELNKKEAKLKE 1729
EE E K+++
Sbjct: 954 EEAEALENKIED 965
Score = 67.4 bits (165), Expect = 7e-11
Identities = 78/284 (27%), Positives = 146/284 (51%), Gaps = 27/284 (9%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKID-----DEKSVSYQ--LEEK 146
+E+ E++ L EE+ + + + EL + ++ELE+KL++ +E+ Q L
Sbjct: 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
Query: 147 AIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAI-AKKDEVIEKLKAEL 205
A EIS+L + + L+E + +L+ +L +L+ + + K + A+ +E +E+LK EL
Sbjct: 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEEL 353
Query: 206 ESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNH----ETLIAK 261
ES+E L E E+E+EE ++ E L V + + I + N E + +
Sbjct: 354 ESLEAELEELEAELEEL--ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLER 411
Query: 262 LEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSG 321
LE R+++E E + E + +KEL++++E LE L++ ++ELE
Sbjct: 412 LEDRRERLQQEIEELLKKLEEAE--LKELQAELEELEEELEELQEELE-----------R 458
Query: 322 NEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKE 365
E+ +E L++E EE ++ L E LA+L+ +SL++ E
Sbjct: 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLE 502
Score = 60.8 bits (148), Expect = 7e-09
Identities = 71/297 (23%), Positives = 143/297 (48%), Gaps = 14/297 (4%)
Query: 121 RIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTV 180
R+EEL ++L++ ++ K +LEE E+ +L E L+ E+ L++++ +L + +
Sbjct: 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL-- 290
Query: 181 EDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEK 240
A + I++ ++ + L+ L ++E+ L E E+++EE + D++ EEL +
Sbjct: 291 ----YALANEISRLEQQKQILRERLANLERQLEELEAQLEELES-----KLDELAEELAE 341
Query: 241 LVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEAS 300
L + +EL E +++ E + +LEA+L ++ E + V +L+ ++ +L
Sbjct: 342 LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
Query: 301 LKQKEQELEGWTDN-DNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQK 359
+++ E LE D + E + + E +E++ +L + E L +L+ E L++
Sbjct: 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE 461
Query: 360 QLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKE 416
L E ELEE + +LA LQ L L+ V+ LK +
Sbjct: 462 ALEELREELEE--AEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQS 516
Score = 60.1 bits (146), Expect = 1e-08
Identities = 76/312 (24%), Positives = 145/312 (46%), Gaps = 27/312 (8%)
Query: 170 KLRDLDENVT-VEDIKKANESAIAKKDEVIEKLKAELESVEK--ALREKESEVEEWGNND 226
KL EN+ +EDI + + + ++ L+ + E E+ L+ + E+E
Sbjct: 180 KLERTRENLDRLEDI-------LNELERQLKSLERQAEKAERYKELKAELRELELALLVL 232
Query: 227 AWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAM 286
++++EELE+L E +E E ++ + +LE L ++ E E
Sbjct: 233 RL---EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKE 289
Query: 287 VKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQEST 346
+ L +++ LE + + L N E +E L+ + +E+ E+LA+ E
Sbjct: 290 LYALANEISRLEQQKQILRERLA----NLERQLEELEAQLEELESKLDELAEELAELEEK 345
Query: 347 LAKLKTHSESLQKQLLEKEMELEEWGN-----NDSWGGDNDKLATLQQENKVLNEKVSEL 401
L +LK ESL+ +L E E ELEE + + K+A L+ + LN ++ L
Sbjct: 346 LEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERL 405
Query: 402 QTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLK 461
+ +L +E+ ++ + ++E+ + + EL L+A+ E E+ + EL+ + E L+
Sbjct: 406 EARLERLEDRRERLQQEIEELLKKLE-----EAELKELQAELEELEEELEELQEELERLE 460
Query: 462 QALIDKENELSE 473
+AL + EL E
Sbjct: 461 EALEELREELEE 472
Score = 58.9 bits (143), Expect = 3e-08
Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 21/334 (6%)
Query: 93 NVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQ 152
+E+ EKI L E++++L+ EL +EELE++L+Q + + +S Q+ ++++
Sbjct: 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
Query: 153 LTEHNRFLQEEMQSLKDKLRDLDENVTV--------EDIKKANESAIAKKDEVIEKLKAE 204
L L+E + L +L +L+ + E+ E+ I + + IE+LK E
Sbjct: 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
Query: 205 LESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEA 264
L+++ +AL E +E+ + +++E LE L +++ E I +L
Sbjct: 798 LKALREALDELRAELTLLN-----EEAANLRERLESLERRIAATERRLEDLEEQIEELSE 852
Query: 265 DLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQ 324
D+ + E E E ++ ++ L ++ +LE +L ELE ++ E
Sbjct: 853 DIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR----ELES 908
Query: 325 DIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEK-EMELEEWGNNDSWGGDNDK 383
L++E EE++EKLA+ E L L+ ++LQ++L E+ + LEE ++ D
Sbjct: 909 KRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALEN--KIEDD 966
Query: 384 LATLQQENKVLNEKVSELQT-QLLSVEEALKKKE 416
++ K L K+ EL L ++EE + KE
Sbjct: 967 EEEARRRLKRLENKIKELGPVNLAAIEEYEELKE 1000
Score = 58.9 bits (143), Expect = 3e-08
Identities = 68/317 (21%), Positives = 129/317 (40%), Gaps = 20/317 (6%)
Query: 1321 EEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQS 1380
EE +++ EL+ L+ + E++ ++E + L + + +E S ++ L+
Sbjct: 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK------ELEELSRQISALRK 733
Query: 1381 ELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKT 1440
+LA +QL + + E EI L L E +L + ++ LE Q++
Sbjct: 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
Query: 1441 TSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVE 1500
E L L E + +L+L + + + + S ER + A +
Sbjct: 794 LKEELKALREALDELRAELTLLNEEAANLRERLESL-----------ERRIAATERRLED 842
Query: 1501 TSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQ--HLLKTEEDNTS-E 1557
+ EL+ +++L E L I +L L NE L++ LL++E + S E
Sbjct: 843 LEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE 902
Query: 1558 LVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEK 1617
L + E +L +L E E++ VR + E L+ + E+ E L+ K
Sbjct: 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK 962
Query: 1618 LYQAEDVVQKHQASLTN 1634
+ E+ ++ L N
Sbjct: 963 IEDDEEEARRRLKRLEN 979
Score = 57.8 bits (140), Expect = 6e-08
Identities = 78/364 (21%), Positives = 150/364 (41%), Gaps = 30/364 (8%)
Query: 431 GNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELS----EWGQTNEWGSPSSS 486
E+ L K E E+ I EL+ L++ L + E EL E + + S
Sbjct: 674 ERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
Query: 487 DLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQG----------TSSHSHPVDQQVQD 536
DL L E L +++++ +++L+ ++E ++ + ++ Q++
Sbjct: 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
Query: 537 RESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLT---AEKERLDEE 593
+ ++ L + LR + L N + +L + E L E+
Sbjct: 794 LKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED 853
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE 653
+ L+ E EL++ +E+ + + L E LEE ++LR +LE + +E
Sbjct: 854 IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
Query: 654 IQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYE---QMSEKFENQTGKDSVDIDTL 710
+EL + L + + + +D E L E+Y + +E EN+ D +
Sbjct: 914 RRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRR 973
Query: 711 IKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKI 770
+K L++K +EL + L I+ E E L+ + D L +D L ++K LE I
Sbjct: 974 LKRLENKIKELGPV-----NLAAIE-EYEELKERYDFLTAQKED----LTEAKETLEEAI 1023
Query: 771 SELN 774
E++
Sbjct: 1024 EEID 1027
Score = 57.4 bits (139), Expect = 9e-08
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 16/277 (5%)
Query: 1375 LTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSE-------ELPKLKDL 1427
L L+ EL E + ++ + + E +++ L +SE +L L
Sbjct: 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
Query: 1428 GGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQ 1487
+++ LE+Q + E LA ERQL E + QL +S+L+E+ + ++ E E +
Sbjct: 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAEL---EEKLEELK 350
Query: 1488 EREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHL 1547
E E+ + E E EL RL+ L+E+ L +++ L L +L NE ERL+ L
Sbjct: 351 E-ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARL 409
Query: 1548 LKTEEDNTSELVKAEQTIQDLHVKLREAE-ERVKSSATAYTSASVRSNQQVEALTSQVKS 1606
E + +Q I++L KL EAE + +++ +++E L ++
Sbjct: 410 ----ERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEE 465
Query: 1607 LTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQ 1643
L E+ E+ ++ L AE + + QA L +L+ + E +
Sbjct: 466 LREELEEAEQALDAAERELAQLQARLDSLERLQENLE 502
Score = 57.0 bits (138), Expect = 1e-07
Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 44/342 (12%)
Query: 498 LRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQ 557
L +K+ E + I++L+ L ++ ++++++ +E LSR+ LR + +
Sbjct: 682 LEEKIEELEEKIAELEKALAELRKELEE----LEEELEQLRKELEELSRQISALRKDLAR 737
Query: 558 LGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKG 617
L +E QL +L +E+T L E EL+++LE+A E+
Sbjct: 738 LEAEVE------------------QLEERIAQLSKELTELEAEIEELEERLEEAEEELAE 779
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQA 677
E EI++LE EQL+ + + LR E+ L+ + N+ + + A
Sbjct: 780 AEAEIEELEAQ----IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
Query: 678 LDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVE 737
+ + E+L+E+ E++SE DI++L ++ +E + L E L+ + E
Sbjct: 836 TERRLEDLEEQIEELSE-----------DIESLAAEIEELEELIEELESE---LEALLNE 881
Query: 738 KENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEEN 797
+ +LE L L + ++ L +LE+K SEL ++ L R+ E
Sbjct: 882 RASLEEALALLRSELEELSEEL----RELESKRSELRRELEELREKLAQLELRLEGLEVR 937
Query: 798 NAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQ 839
LQ + + E+ + K E +++
Sbjct: 938 IDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
Score = 55.4 bits (134), Expect = 3e-07
Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 8/218 (3%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
+ ++ + L E ++ L+ + EL +++EELE KL + ++ + +LEE E+ L
Sbjct: 297 ISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESL 356
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAIAKKDEVIEKLKAELESVEKAL 212
L+ E++ L+ +L +L+E + T+ E IA + IE+L+A LE +E
Sbjct: 357 EAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
Query: 213 REKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEE 272
+ E+EE +++ ELE+L ++EL E+ + E L LE ++E
Sbjct: 417 ERLQQEIEELLKKLEEAELKELQAELEEL---EEELEELQEELERLEEALEELREELEEA 473
Query: 273 KEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEG 310
++A + + E + +L++++++LE + E EG
Sbjct: 474 EQALDAAERE----LAQLQARLDSLERLQENLEGFSEG 507
Score = 55.1 bits (133), Expect = 4e-07
Identities = 82/395 (20%), Positives = 175/395 (44%), Gaps = 55/395 (13%)
Query: 678 LDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVE 737
L+ + + L+ + E+ E + +++ L+ L+ +EEL L +E ++E
Sbjct: 198 LERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEA-EEELE 256
Query: 738 KENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEEN 797
+ E+Q ++K+ L ++LE +I EL + NEI+ L ++ + E
Sbjct: 257 ELTAELQ------ELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRER 310
Query: 798 NAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAES 857
A L+R + +LE ++++L + D L EL E
Sbjct: 311 LANLERQLEELEA-------------------------QLEELESKLDELAEELAELEEK 345
Query: 858 TQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKV 917
+ +K+E L A + E + + LES +E +E L++ +AQ + +I +
Sbjct: 346 LEELKEELESLEAE------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLN 399
Query: 918 TELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIK 977
E+ + + ++ ED+ L+ ++ L ++L + ++ EL A LE ++ E ++
Sbjct: 400 NEIERLEARLERLEDRRERLQQEIEELL------KKLEEAELKELQAELEELEEE---LE 450
Query: 978 QMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVK 1037
++ EEL+ L E L++ EE + LD ++ + +L A+L ++ L+ ++
Sbjct: 451 ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD--------SLERLQENLE 502
Query: 1038 ELQDKLRSYTHVENELGQYRSKVYELEQIQARLEA 1072
+ +++ ++ L + EL + EA
Sbjct: 503 GFSEGVKALLKNQSGLSGILGVLSELISVDEGYEA 537
Score = 53.1 bits (128), Expect = 1e-06
Identities = 64/304 (21%), Positives = 125/304 (41%), Gaps = 22/304 (7%)
Query: 1427 LGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPA 1486
L ++ L ++L+ E L E +L E +L + +LEE+ +S
Sbjct: 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSE----------L 279
Query: 1487 QEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQH 1546
+E Q E LA + L+++K +L + +L L + E L+
Sbjct: 280 EEEIEELQK--------ELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESK 331
Query: 1547 LLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKS 1606
L + E+ +EL + + +++ L E +++ S +Q+E L S+V
Sbjct: 332 LDELAEE-LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQ 390
Query: 1607 LTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYA 1666
L Q L ++ + E +++ + LQ +E+ + + L+ LQ EL
Sbjct: 391 LELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE---AELKELQAELEELEE 447
Query: 1667 KNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAK 1726
+ EL + + L+ L+E RE L A + D ++ +Q + + +L E L
Sbjct: 448 ELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEG 507
Query: 1727 LKEV 1730
+K +
Sbjct: 508 VKAL 511
Score = 52.8 bits (127), Expect = 2e-06
Identities = 118/599 (19%), Positives = 231/599 (38%), Gaps = 66/599 (11%)
Query: 1178 LEAQLKELADNETQYKQMQIVYEDTQRKLNE----------ELARRDATIATLNTTGAPD 1227
LE +EL + + + K+ + E+ +L E E++ + I L
Sbjct: 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKE-LYA 292
Query: 1228 LNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLE 1287
L I + ++K L E L E + + L+ LE L ++ E LE + E+L+
Sbjct: 293 LANEISRLEQQK-QILRERLANLERQLEELEAQLEELESKL-DELAEELAELEEKLEELK 350
Query: 1288 YKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEH---VQELRELQLMNESLQNEVLRS 1344
+L+ E ++EL + + + + +E+ ++ +L+L SL NE+ R
Sbjct: 351 EELESLEAELEELEAELE-----ELESRLEELEEQLETLRSKVAQLELQIASLNNEIERL 405
Query: 1345 ATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESN 1404
++ +++ L+Q +L K E + L LQ+EL E ++L + +
Sbjct: 406 EARLERLEDRRERLQQEIEELLKKLEEAE-LKELQAELEELEEELEELQEELERLEEALE 464
Query: 1405 NYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQS 1464
+E+ L +L L ++ +L E L +E + L QS
Sbjct: 465 ELREELEEAEQALDAAERELAQLQARLDSL--------ERLQENLEGFSEGVKALLKNQS 516
Query: 1465 QLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLT 1524
L + ++S + E A E + + V E A + ++ +
Sbjct: 517 GLSGILGVLSELISVDEGYEAAIE-AALGGRLQAVVV--ENLNAAKKAIAFLKQNELGRV 573
Query: 1525 EINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAE--------------------QT 1564
L + T N+R ++ +LVK +
Sbjct: 574 TFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDN 633
Query: 1565 IQDLHVKLREAE-------ERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEK 1617
+L KLR + V+ T S ++N + +++ L E+ E+L+EK
Sbjct: 634 ALELAKKLRPGYRIVTLDGDLVRPGG-VITGGSAKTNSSILERRREIEELEEKIEELEEK 692
Query: 1618 LYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLIST 1677
+ + E + + + L L+ LEQ + E + E+++ + L+ +L A+ +L + I+
Sbjct: 693 IAELEKALAELRKELEELEEELEQLRKELE-ELSRQISALRKDLARLEAEVEQLEERIAQ 751
Query: 1678 LQHQLQEARESLSAA----GRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNN 1732
L +L E + ++L + I+EL ++ QL EEL L E+
Sbjct: 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRA 810
Score = 52.8 bits (127), Expect = 2e-06
Identities = 58/306 (18%), Positives = 121/306 (39%), Gaps = 16/306 (5%)
Query: 919 ELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQ 978
E+ + EK ++ E+K ELE L + E+ + EL + + A + +
Sbjct: 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
Query: 979 MNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKE 1038
+ E++ L E + Q S E ++E ++R++E + +LAE A + +E +E
Sbjct: 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
Query: 1039 LQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTY 1098
L+ + + EL + L + LE E + +L +++
Sbjct: 798 LKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
Query: 1099 NAKITHA-----------ALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNEL 1147
A+I + E ++ + L E +EL ++++E + L+ EL
Sbjct: 858 AAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917
Query: 1148 QSLQDAFSVMKSDNASLLLEKNTLMET-----KLTLEAQLKELADNETQYKQMQIVYEDT 1202
+ L++ + ++ L + + L E LTLE E ++ + +
Sbjct: 918 EELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRL 977
Query: 1203 QRKLNE 1208
+ K+ E
Sbjct: 978 ENKIKE 983
Score = 52.0 bits (125), Expect = 4e-06
Identities = 65/331 (19%), Positives = 137/331 (41%), Gaps = 23/331 (6%)
Query: 824 ISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQ 883
+ IE KI++L ++ L+ L + + +++E L + + I +
Sbjct: 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALR 732
Query: 884 LK-QNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLD 942
LE+ ++ + L + + + EI L E+ + E + ELE+ ++
Sbjct: 733 KDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIE 792
Query: 943 AKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRK 1002
KE+L + L+ ++AE + +NEE L E L+ +
Sbjct: 793 Q------LKEELKALR-----EALDELRAE---LTLLNEEAANLRERLESLERRIAATER 838
Query: 1003 ILDEYKQR---VQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSK 1059
L++ +++ + E LA EI +I+ LE +++ L ++ S +E L RS+
Sbjct: 839 RLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS---LEEALALLRSE 895
Query: 1060 VYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQM 1119
+ EL + LE++R++ E E L+ L+ +L+ +I + E + +
Sbjct: 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEE 955
Query: 1120 QTLEYEKQELLKQIQEESIASNFLKNELQSL 1150
K E ++ + L+N+++ L
Sbjct: 956 AEALENKIEDDEEEARRRLKR--LENKIKEL 984
Score = 51.2 bits (123), Expect = 6e-06
Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 5/278 (1%)
Query: 1032 LEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDL 1091
L + V L++ ++ EL + ++ EL LE + + E + +L
Sbjct: 227 LALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL 286
Query: 1092 QTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQ 1151
Q +L +I + +EQ+ ++ ++ LE + +EL Q++E + L EL L+
Sbjct: 287 QKELYALANEI---SRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELE 343
Query: 1152 DAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELA 1211
+ +K + SL E L LE++L+EL + + E LN E+
Sbjct: 344 EKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
Query: 1212 RRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEK 1271
R +A + L E + K ++A L E+ + E ++ L+E+Q LE+
Sbjct: 404 RLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEAL 463
Query: 1272 YQFEKEALELRTE--DLEYKLQEKEKMIQELNEMKQSF 1307
+ +E E E +L + + + L ++++
Sbjct: 464 EELREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
Score = 50.8 bits (122), Expect = 8e-06
Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 911 YEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLN---KNKMAELSAMLE 967
+ EL + E+ K+ E++ EL + L + ++ EL L
Sbjct: 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
Query: 968 SVQAE----NISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIA 1023
++ E + + E L L L++ EE LDE + + EL+ KL E
Sbjct: 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKE 351
Query: 1024 SKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQA-------RLEAERTQ 1076
S+ LE EL++ +E +L RSKV +LE A RLEA +
Sbjct: 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLER 411
Query: 1077 WIHEFEVKTNTLSDLQTQLDTYNAKITHAAL--VEQELGEMKNQMQTLEYEKQELLKQIQ 1134
E + +L +L+ K A L +E+EL E++ +++ LE +EL ++++
Sbjct: 412 LEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
Query: 1135 EESIASNFLKNELQSLQDAFSVMKS 1159
E A + + EL LQ ++
Sbjct: 472 EAEQALDAAERELAQLQARLDSLER 496
Score = 50.8 bits (122), Expect = 8e-06
Identities = 72/357 (20%), Positives = 144/357 (40%), Gaps = 35/357 (9%)
Query: 1275 EKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMN 1334
+ E LE + +LE L E K ++EL E + +R EE +++ L+
Sbjct: 685 KIEELEEKIAELEKALAELRKELEELEEEL---------EQLRKELEELSRQISALRKDL 735
Query: 1335 ESLQNEVLRSATEIDNMKETITYLEQYNLQL--------SKSQESSTTLTLLQSELAEQR 1386
L+ EV + I + + +T LE +L + E+ + L++++ + +
Sbjct: 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK 795
Query: 1387 TLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLA 1446
+ L + ++ E ++E L L ++ ++ LE+Q++ SE +
Sbjct: 796 EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIE 855
Query: 1447 TKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERN 1506
+ ++ E +E + +S+LE + +S E + E S E
Sbjct: 856 SLAAEIEELEELIEELESELEALLNERAS-----------LEEALALLRSELEELSEELR 904
Query: 1507 ELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQ 1566
EL + L+ E L ++ L L L + L++ L + E E I+
Sbjct: 905 ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIE 964
Query: 1567 DLHVKLREAEERVKSSATAYTSASVRSNQQVEA-------LTSQVKSLTEQKEKLQE 1616
D + R +R+++ ++ + ++ E LT+Q + LTE KE L+E
Sbjct: 965 DDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEE 1021
Score = 49.3 bits (118), Expect = 2e-05
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 1596 QVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLE 1655
++ L +++ L E+ E+LQE+L +AE+ +++ A L L+ LE+ + E +E+ + +E
Sbjct: 226 ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV-SELEEEIE 284
Query: 1656 FLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQ 1715
LQ EL L IS L+ Q Q RE L+ L QL + ++EL K+++
Sbjct: 285 ELQKELYA-------LANEISRLEQQKQILRERLA---NLERQLEELEAQLEELESKLDE 334
Query: 1716 LMEELNKKEAKLKEVNN 1732
L EEL + E KL+E+
Sbjct: 335 LAEELAELEEKLEELKE 351
Score = 49.3 bits (118), Expect = 2e-05
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 975 SIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEI 1034
+K+ EEL+ LT L++ EE R + E ++ ++EL +L + I LE
Sbjct: 247 ELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA----LANEISRLEQ 302
Query: 1035 QVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQ 1094
Q + L+++L ++E +L + +++ ELE L E + + E L L+ +
Sbjct: 303 QKQILRERLA---NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAE 359
Query: 1095 LDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAF 1154
L+ A++ E L E++ Q++TL + +L QI + L+ L+ L+D
Sbjct: 360 LEELEAELEEL---ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRR 416
Query: 1155 SVMKSDNASLL--LEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELAR 1212
++ + LL LE+ L E + LE +EL + + + ++++ E+ + +L E
Sbjct: 417 ERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQA 476
Query: 1213 RDATIATLNTTGA 1225
DA L A
Sbjct: 477 LDAAERELAQLQA 489
Score = 49.3 bits (118), Expect = 2e-05
Identities = 47/226 (20%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 1507 ELALRLQNLQEEKTMLLTEINDLRLNQ-NTLYNENERLKQHLLKTEEDNTSELVKAEQTI 1565
E A R + L+ E L + LRL + E + + + E+ T+EL + E+ +
Sbjct: 210 EKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKL 269
Query: 1566 QDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVV 1625
++L +++ E EE + ++ L Q + L E+ L+ +L + E +
Sbjct: 270 EELRLEVSELEEEI----EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQL 325
Query: 1626 QKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEA 1685
++ ++ L L L + + + + E+ + LE L+ EL A+ EL + L+ QL+
Sbjct: 326 EELESKLDELAEELAELEEKLE-ELKEELESLEAELEELEAELEELESRLEELEEQLETL 384
Query: 1686 RESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVN 1731
R ++ Q+ + I+ L ++ +L + + + +++E+
Sbjct: 385 RSKVAQLEL---QIASLNNEIERLEARLERLEDRRERLQQEIEELL 427
Score = 46.6 bits (111), Expect = 2e-04
Identities = 76/324 (23%), Positives = 127/324 (39%), Gaps = 46/324 (14%)
Query: 1435 EKQLKTTSETLATKERQLAETKEQLSLAQSQ-------------LEEVTQLMSSNDRPEA 1481
E++L+ T E L E L E + QL + Q L E+ + E
Sbjct: 178 ERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEEL 237
Query: 1482 DGEPAQEREVVAQHVAPVETSRERNELALRLQNLQE-------EKTMLLTEINDLRLNQN 1534
E + +E + E E EL LQ L+E E + L EI +L+
Sbjct: 238 REELEELQEELK------EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
Query: 1535 TLYNENERL---KQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASV 1591
L NE RL KQ L + + +L + E +++L KL E E +
Sbjct: 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKE 351
Query: 1592 ----------RSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQ 1641
++E L S+++ L EQ E L+ K+ Q E + + L+ LE+
Sbjct: 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLER 411
Query: 1642 FQAEKDNEIAQSLEFLQ----GELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSD 1697
+ ++ + E L+ EL A+ EL + + LQ +L+ E+L L +
Sbjct: 412 LEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE---ELRE 468
Query: 1698 QLNQKSQTIQELTEKVNQLMEELN 1721
+L + Q + ++ QL L+
Sbjct: 469 ELEEAEQALDAAERELAQLQARLD 492
Score = 45.4 bits (108), Expect = 3e-04
Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 16/247 (6%)
Query: 29 LEPCQTTGSDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGF 88
LE + + EA D L+ E L ++ + R +S
Sbjct: 787 LEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEE- 845
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
+E+ +E I +L E+ +L+ EL S +E L ++ + + +LEE +
Sbjct: 846 ----QIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSE 901
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTV------EDIKKANESAIAKKDEVIE--- 199
E+ +L L+ E++ L++KL L+ + ++ +E +E
Sbjct: 902 ELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALEN 961
Query: 200 KLKAELESVEKALREKESEVEEWG--NNDAWGASDDVKEELEKLVVEKQELIEVIQNHET 257
K++ + E + L+ E++++E G N A +++KE + L +K++L E + E
Sbjct: 962 KIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEE 1021
Query: 258 LIAKLEA 264
I +++
Sbjct: 1022 AIEEIDR 1028
Score = 45.4 bits (108), Expect = 4e-04
Identities = 78/362 (21%), Positives = 151/362 (41%), Gaps = 21/362 (5%)
Query: 1173 ETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASI 1232
+T ++ + +E+ + E + ++++ + ++ L E + L +
Sbjct: 667 KTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEEL-----EEELEQLRKEL 721
Query: 1233 ENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQE 1292
E + ++ A L + L + EA+ + L+E A L K L+E + E E LE R E+ E +L E
Sbjct: 722 EELSRQISA-LRKDLARLEAEVEQLEERIAQLSKELTE-LEAEIEELEERLEEAEEELAE 779
Query: 1293 KEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMK 1352
E I+EL I K+ ++ E + EL L+NE N R + +
Sbjct: 780 AEAEIEELEAQ-----IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIA 834
Query: 1353 ETITYLEQYNLQLSKSQESSTTLTLLQSELAEQ-RTLNQQLVQIVNTKHTESNNYHQEIL 1411
T LE Q+ + E +L EL E L +L ++N + + + +
Sbjct: 835 ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE----EALA 890
Query: 1412 RLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQ 1471
L L E +L++L + + L ++L+ E LA E +L + ++ Q +L E
Sbjct: 891 LLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYS 950
Query: 1472 L---MSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELAL-RLQNLQEEKTMLLTEIN 1527
L + + + + + R + + ++ N A+ + L+E L +
Sbjct: 951 LTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE 1010
Query: 1528 DL 1529
DL
Sbjct: 1011 DL 1012
Score = 44.7 bits (106), Expect = 5e-04
Identities = 60/311 (19%), Positives = 130/311 (41%), Gaps = 20/311 (6%)
Query: 1090 DLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQS 1149
+L + +++EL E + +++ L E QEL ++++E + + L+ E++
Sbjct: 226 ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEE 285
Query: 1150 LQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEE 1209
LQ + ++ + L +K L E LE QL+EL + + +L EE
Sbjct: 286 LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD-------ELAEE 338
Query: 1210 LARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLS 1269
LA + + L S+E L+E +A L E+ + E ++ L+ +++ + +
Sbjct: 339 LAELEEKLEELKE-----ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
Query: 1270 EKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRE 1329
+ E L LE +E++ QE+ E+ + + ++ EE +EL E
Sbjct: 394 QIASLNNEIERLEAR-LERLEDRRERLQQEIEELLKKLEEAE-LKELQAELEELEEELEE 451
Query: 1330 LQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLN 1389
LQ E L+ + E++ ++ + E+ + + L L+ +
Sbjct: 452 LQEELERLEEALEELREELEEAEQALDAAER------ELAQLQARLDSLERLQENLEGFS 505
Query: 1390 QQLVQIVNTKH 1400
+ + ++ +
Sbjct: 506 EGVKALLKNQS 516
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and
chromosome partitioning].
Length = 1163
Score = 75.5 bits (186), Expect = 2e-13
Identities = 78/342 (22%), Positives = 162/342 (47%), Gaps = 17/342 (4%)
Query: 81 TSTVRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVS 140
+ R+ +++ E++ L ++ +L+ + L + + LED L++ + +
Sbjct: 656 SRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELE 715
Query: 141 YQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKAN-ESAIAKKDEVIE 199
QLEE E++ L E LQ ++ L+++L +L+E + + E + +E +
Sbjct: 716 RQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALA 775
Query: 200 KLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLI 259
KLK E+E +E+ + + E+EE ++ + L+ L E + L + + E I
Sbjct: 776 KLKEEIEELEEKRQALQEELEELE-----EELEEAERRLDALERELESLEQRRERLEQEI 830
Query: 260 AKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGS 319
+LE ++ ++E+ + E + ++ELK ++E LEA ++ E EL+
Sbjct: 831 EELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELK---------- 880
Query: 320 SGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGG 379
E++ E L++E E++ +LA+ + + KL+ E L+ +L E+EL E
Sbjct: 881 -ELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEY 939
Query: 380 DNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLED 421
++ L++E + L E++ L L E ++ E E+
Sbjct: 940 EDTLETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEE 981
Score = 73.6 bits (181), Expect = 9e-13
Identities = 89/333 (26%), Positives = 167/333 (50%), Gaps = 40/333 (12%)
Query: 99 EKIRALNEE---VSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTE 155
E+ R L EE VS+ K ++ E ++E E+ L++ D + + QLE+ + +
Sbjct: 155 EERRKLIEEAAGVSKYKERKEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEKA-- 212
Query: 156 HNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREK 215
E Q LK +LR+L+ + + +K+ + + + +E + +L+ ELE +++ L E
Sbjct: 213 ------ERYQELKAELRELELALLLAKLKELRKE-LEELEEELSRLEEELEELQEELEEA 265
Query: 216 ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEA 275
E E+EE +K ELE+L E +EL E + + I +LE +++ ++E E
Sbjct: 266 EKEIEE------------LKSELEELREELEELQEELLELKEEIEELEGEISLLRERLEE 313
Query: 276 EVSGKLEQDAMVKELKSK-------VETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEA 328
+ E + ++ELK K +E E L++ EQ L + +E
Sbjct: 314 LENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEE 373
Query: 329 LKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQ 388
L++ E ++E+LA+ E+ LA+++ E L++++ E LE +++L L+
Sbjct: 374 LEELFEALREELAELEAELAEIRNELEELKREIESLEERLERL---------SERLEDLK 424
Query: 389 QENKVLNEKVSELQTQLLSVEEALKKKENDLED 421
+E K L ++ ELQT+L + E L++ E LE+
Sbjct: 425 EELKELEAELEELQTELEELNEELEELEEQLEE 457
Score = 67.4 bits (165), Expect = 7e-11
Identities = 66/277 (23%), Positives = 134/277 (48%), Gaps = 11/277 (3%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
+++ +++ L EE+S+L+ + EL +EE E ++++ + + + +LEE E+ +L
Sbjct: 234 LKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLEL 293
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
E L+ E+ L+++L +L+ + E + + E IE LK ELE E L
Sbjct: 294 KEEIEELEGEISLLRERLEELENELEEL------EERLEELKEKIEALKEELEERETLLE 347
Query: 214 EKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEK 273
E E + E A ++++E+L L+ E +EL E ++ + A++ EE
Sbjct: 348 ELEQLLAELEE-----AKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEEL 402
Query: 274 EAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKEN 333
+ E+ E+ + E ++ L+ + +EL+ + N E+ +E L+
Sbjct: 403 KREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRL 462
Query: 334 EEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
+E++ +LA+ + L +L+ SL+ +L E E
Sbjct: 463 KELERELAELQEELQRLEKELSSLEARLDRLEAEQRA 499
Score = 67.0 bits (164), Expect = 8e-11
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 29/321 (9%)
Query: 1422 PKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEA 1481
+LK+L ++A LE QL+ E L + + +L ++ L + QLEE+ + + R A
Sbjct: 667 RELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726
Query: 1482 DGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENE 1541
E +L RL+ L+EE L E+ +L+ L E E
Sbjct: 727 ------------------ALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELE 768
Query: 1542 RLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALT 1601
L++ L K +E+ K + ++L +L E E + A Q+ E L
Sbjct: 769 SLEEALAKLKEEIEELEEKRQALQEELE-ELEEELEEAERRLDALERELESLEQRRERLE 827
Query: 1602 SQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGEL 1661
+++ L E+ E+L+EKL + E+ +++ + L L+ LE+ +AEK E+ L+ L+ E
Sbjct: 828 QEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEK-EELEDELKELEEEK 886
Query: 1662 NNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQE---------LTEK 1712
+ EL ++ L+ ++++ RE L ++L + ++E L +
Sbjct: 887 EELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETE 946
Query: 1713 VNQLMEELNKKEAKLKEVNNG 1733
+ + +E L ++ L VN
Sbjct: 947 LEREIERLEEEIEALGPVNLR 967
Score = 65.5 bits (160), Expect = 3e-10
Identities = 98/381 (25%), Positives = 191/381 (50%), Gaps = 45/381 (11%)
Query: 318 GSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSW 377
G S N++ A K+E +E++E+LA+ E+ L KL+ +SL+ +L E LEE
Sbjct: 654 GGSRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEE------- 706
Query: 378 GGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELN 437
L+++ + L ++ EL+ +L ++EE L++ ++ LE+ EL
Sbjct: 707 ---------LRRQLEELERQLEELKRELAALEEELEQLQSRLEE----------LEEELE 747
Query: 438 NLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGL 497
L + E ++ + EL+ + E L++AL + E+ E L+EE
Sbjct: 748 ELEEELEELQERLEELEEELESLEEALAKLKEEIEE----------LEEKRQALQEELEE 797
Query: 498 LRQKLSEQKVIISKLKTQL---EAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTR 554
L ++L E + + L+ +L E ++ +++++++ E +++ L E E L
Sbjct: 798 LEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKE 857
Query: 555 VEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEK 614
+E+L +E + D +L EKE L+EE+ L E ELK+++E+ E+
Sbjct: 858 LEELKEELE----ELEAEKEELEDELKELEEEKEELEEELRELESELAELKEEIEKLRER 913
Query: 615 QKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVE 674
+ LE ++++LE + L E+LE ++ +D++E L EI+ L ++ + + +A E
Sbjct: 914 LEELEAKLERLEVELPELEEELE--EEYEDTLETELEREIERLEEEIEALGPVNLRAIEE 971
Query: 675 KQALDGKYEELKEKYEQMSEK 695
+ ++ +YEELK + E + E
Sbjct: 972 YEEVEERYEELKSQREDLEEA 992
Score = 64.7 bits (158), Expect = 4e-10
Identities = 71/298 (23%), Positives = 144/298 (48%), Gaps = 25/298 (8%)
Query: 530 VDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDP---MNNSLDNTAQLTAE 586
+++++ + E+++E L E + L+ + L ++E Q + + A L E
Sbjct: 672 LEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEE 731
Query: 587 KERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
E+L + L +E EL+++LE+ E+ + LEEE++ LEE + L+E++E ++ ++
Sbjct: 732 LEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQAL 791
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVD 706
++ L +EL ++AL + + +Q + +E++E E++ E E
Sbjct: 792 QEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDE----- 846
Query: 707 IDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDL 766
++ ++ L+ + EEL L+E EKE LE D++ L + K +L
Sbjct: 847 LEEELEELEKELEELKEELEELEA------EKEELE-----------DELKELEEEKEEL 889
Query: 767 EAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEI 824
E ++ EL + EI L +R+ E L+ + +LE L+E+ ++ E E+
Sbjct: 890 EEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETEL 947
Score = 63.2 bits (154), Expect = 1e-09
Identities = 86/369 (23%), Positives = 166/369 (44%), Gaps = 41/369 (11%)
Query: 181 EDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEK 240
++ K+ E + + +E +E+L+ LE +EK L + E + E+ ++K EL +
Sbjct: 171 KERKEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEK--AERY----QELKAELRE 224
Query: 241 LVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEAS 300
L E L+ ++ + +LE +L+R++EE E E + ++ELKS++E L
Sbjct: 225 L--ELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREE 282
Query: 301 LKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQ 360
L++ ++EL +++IE L+ E ++E+L + E+ L +L+ E L+++
Sbjct: 283 LEELQEEL-----------LELKEEIEELEGEISLLRERLEELENELEELEERLEELKEK 331
Query: 361 LLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLE 420
+ + ELEE L L+Q L E EL+ +L ++ E L++ L
Sbjct: 332 IEALKEELEE---------RETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALR 382
Query: 421 DWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEW 480
+ EL L A+ +E + ELK + E L++ L L + + +
Sbjct: 383 E-------------ELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKE 429
Query: 481 GSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESR 540
+L T EE ++L EQ + +LE +++++ E+R
Sbjct: 430 LEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEAR 489
Query: 541 IEMLSRENE 549
++ L E
Sbjct: 490 LDRLEAEQR 498
Score = 63.2 bits (154), Expect = 1e-09
Identities = 70/312 (22%), Positives = 145/312 (46%), Gaps = 19/312 (6%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQ 641
+L AE L+ + + + EL+K+LE+ E+ LEEE+++L+E+ +++E
Sbjct: 217 ELKAELRELELALLLAKLK--ELRKELEELEEELSRLEEELEELQEELEEAEKEIE---- 270
Query: 642 VDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTG 701
L++E++EL +L ++ + + + E + L+G+ L+E+ E++ + E
Sbjct: 271 -------ELKSELEELREELEELQEELLELKEEIEELEGEISLLRERLEELENELEELEE 323
Query: 702 KDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
+ + + + +E L + + L ++ KE LE +L L ++ L +
Sbjct: 324 RLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALRE 383
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEK---LKE 818
+LEA+++E+ N EI L +R+ E L+ + +LE L+E L+E
Sbjct: 384 ELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEE 443
Query: 819 FNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIV 878
NE+ E +E ++++L +E L+ EL + + +A L +
Sbjct: 444 LNEELEELEEQLEELRDRLKELERELAELQEEL---QRLEKELSSLEARLDRLEAEQRAS 500
Query: 879 IENQQLKQNLES 890
+ + + LES
Sbjct: 501 QGVRAVLEALES 512
Score = 61.3 bits (149), Expect = 5e-09
Identities = 69/310 (22%), Positives = 141/310 (45%), Gaps = 13/310 (4%)
Query: 1044 RSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKIT 1103
R +E EL + +++ +LE+ L+ E E L +L+ QL+ ++
Sbjct: 667 RELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726
Query: 1104 HAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNAS 1163
E+EL +++++++ LE E +EL ++++E L+ EL+SL++A + +K +
Sbjct: 727 AL---EEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLKEEIEE 783
Query: 1164 LLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTT 1223
L ++ L E LE +L+E ++ E + +L +E+ + I L
Sbjct: 784 LEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELE-- 841
Query: 1224 GAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRT 1283
+ +E L+E + L E+ ++ E + +E++ L++ + EKE LE
Sbjct: 842 ---EKLDELEEELEELEKELEELKEELEELEAEKEELEDELKEL-----EEEKEELEEEL 893
Query: 1284 EDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLR 1343
+LE +L E ++ I++L E + + V + E E + L+ E+ R
Sbjct: 894 RELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIER 953
Query: 1344 SATEIDNMKE 1353
EI+ +
Sbjct: 954 LEEEIEALGP 963
Score = 57.4 bits (139), Expect = 8e-08
Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 21/277 (7%)
Query: 581 AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKD 640
A+L A+ E+L+EE+ L E L+ LE+ + + LE ++++L+ + + L E+LE
Sbjct: 677 AELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQ 736
Query: 641 QVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQT 700
S + L E++EL +L ++ + + + E ++L+ +LKE+ E++ EK +
Sbjct: 737 ----SRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQALQ 792
Query: 701 GKDSVDIDTLIKNLQSKKEELCRLLDE-KNTLDNIKVEKENLEIQLDNLNTNYQDKINTL 759
+ ++ L+ + EE R LD + L++++ +E LE +++ L +++I L
Sbjct: 793 EE--------LEELEEELEEAERRLDALERELESLEQRRERLEQEIEEL----EEEIEEL 840
Query: 760 IQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEF 819
+ ++LE ++ EL E+ +L E+ L+ +LE L E E
Sbjct: 841 EEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESEL 900
Query: 820 NEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAE 856
E + E IE ++++L + + L+ EL E
Sbjct: 901 AELK----EEIEKLRERLEELEAKLERLEVELPELEE 933
Score = 55.5 bits (134), Expect = 2e-07
Identities = 87/407 (21%), Positives = 169/407 (41%), Gaps = 54/407 (13%)
Query: 281 LEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKL 340
+E+ A V + K + E E L++ E+ LE +E L +E E+ EKL
Sbjct: 161 IEEAAGVSKYKERKEEAERKLERTEENLER---------------LEDLLEELEKQLEKL 205
Query: 341 AKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSE 400
+Q + + + + LE + L + +L L++E L E++ E
Sbjct: 206 ERQAEKAERYQELKA--ELRELELALLLAKLKEL------RKELEELEEELSRLEEELEE 257
Query: 401 LQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELL 460
LQ +L E+ +++ +++LE+ EL L+ + E ++ I EL+ + LL
Sbjct: 258 LQEELEEAEKEIEELKSELEEL----------REELEELQEELLELKEEIEELEGEISLL 307
Query: 461 KQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQ 520
++ L + ENEL E + E L EE L ++L + + + K +LE
Sbjct: 308 RERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKL 367
Query: 521 QGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNT 580
S+ +++ + + L E +R +E+L
Sbjct: 368 ---SALLEELEELFEALREELAELEAELAEIRNELEELK------------------REI 406
Query: 581 AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKD 640
L ERL E + L +E EL+ +LE+ + + L EE+++LEE LR++L+ +
Sbjct: 407 ESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELE 466
Query: 641 QVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKE 687
+ +++ L+ +EL + ++ L + + +
Sbjct: 467 RELAELQEELQRLEKELSSLEARLDRLEAEQRASQGVRAVLEALESG 513
Score = 54.7 bits (132), Expect = 4e-07
Identities = 87/369 (23%), Positives = 160/369 (43%), Gaps = 35/369 (9%)
Query: 900 ENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKM 959
+ L+ +A+ + ++ EL + + + ED EL L+ + + + K ++
Sbjct: 670 KELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLE----ELERQLEELKREL 725
Query: 960 AELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLA 1019
A L LE +Q+ +++ EEL+ E L++ EE+ + L +E AKL
Sbjct: 726 AALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESL-------EEALAKLK 778
Query: 1020 EEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIH 1079
EEI Q L+ +++EL+++L E L ++ LEQ + RLE E +
Sbjct: 779 EEIEELEEKRQALQEELEELEEELEE---AERRLDALERELESLEQRRERLEQEIEELEE 835
Query: 1080 EFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIA 1139
E E L +L+ +L+ +E+EL E+K +++ LE EK+EL +++E
Sbjct: 836 EIEELEEKLDELEEELEE----------LEKELEELKEELEELEAEKEELEDELKELEEE 885
Query: 1140 SNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVY 1199
L+ EL+ L+ + +K + L L LE +L EL E ++ +
Sbjct: 886 KEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPEL--EEELEEEYEDTL 943
Query: 1200 EDTQRKLNEELARRDATIATLNTTGAPDLNASIENI--LKEKDATLSEMLKKSEAKDKTL 1257
E + E L + +N +IE ++E+ L + E + L
Sbjct: 944 ETELEREIERLEEEIEALGPVN-------LRAIEEYEEVEERYEELKSQREDLEEAKEKL 996
Query: 1258 QEMQAALEK 1266
E+ L+K
Sbjct: 997 LEVIEELDK 1005
Score = 54.7 bits (132), Expect = 5e-07
Identities = 78/380 (20%), Positives = 153/380 (40%), Gaps = 37/380 (9%)
Query: 1248 KKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSF 1307
+ S A+ + L+E++ L + ++ + E+E L+ E + +E Q +Q
Sbjct: 660 RSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLE 719
Query: 1308 FIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSK 1367
+ ++ E+ L EL+ E L+ E+ ++ ++E + LE+
Sbjct: 720 ELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEE------- 772
Query: 1368 SQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDL 1427
L L+ E+ E Q L + + +E+ L +L+ L
Sbjct: 773 ------ALAKLKEEIEELEEKRQALQEELE-------ELEEELEEAERRLDALERELESL 819
Query: 1428 GGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQ 1487
+ LE++++ E + E +L E +E+L + +LEE+ + +
Sbjct: 820 EQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELE-----------EL 868
Query: 1488 EREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHL 1547
E E E E+ EL L+ L+ E L EI LR L + ERL+ L
Sbjct: 869 EAEKEELEDELKELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVEL 928
Query: 1548 LKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSL 1607
+ EE+ E L +L ER++ A ++R+ ++ E + + + L
Sbjct: 929 PELEEELEEEY------EDTLETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEEL 982
Query: 1608 TEQKEKLQEKLYQAEDVVQK 1627
Q+E L+E + +V+++
Sbjct: 983 KSQREDLEEAKEKLLEVIEE 1002
Score = 54.3 bits (131), Expect = 7e-07
Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 3/268 (1%)
Query: 957 NKMAELSAMLESVQAENIS--IKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQEL 1014
+ EL A L ++ + +K++ +EL+ L E L + EE ++ L+E ++ ++EL
Sbjct: 213 ERYQELKAELRELELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEEL 272
Query: 1015 DAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAER 1074
++L E + + L +E+++ + + L + +++ ELE+ L+ +
Sbjct: 273 KSELEELREELEELQEELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKI 332
Query: 1075 TQWIHEFEVKTNTLSDLQTQLDTYNAKIT-HAALVEQELGEMKNQMQTLEYEKQELLKQI 1133
E E + L +L+ L + L E++ + L E EL ++
Sbjct: 333 EALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAEL 392
Query: 1134 QEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYK 1193
E LK E++SL++ + L E L L+ +L+EL + + +
Sbjct: 393 AEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELE 452
Query: 1194 QMQIVYEDTQRKLNEELARRDATIATLN 1221
+ D ++L ELA + L
Sbjct: 453 EQLEELRDRLKELERELAELQEELQRLE 480
Score = 53.6 bits (129), Expect = 1e-06
Identities = 68/342 (19%), Positives = 142/342 (41%), Gaps = 21/342 (6%)
Query: 1401 TESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLS 1460
E +E+ L L + +LK L ++ +LE L+ L ERQL E K +L+
Sbjct: 667 RELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELA 726
Query: 1461 LAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKT 1520
+ +LE++ + + + E + E+ + E E +L+ EE
Sbjct: 727 ALEEELEQLQSRLEELEEELEELE-EELEELQERLEELEEELESLEEALAKLKEEIEELE 785
Query: 1521 MLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVK 1580
+ + E ER L + E + EQ I++L ++ E EE++
Sbjct: 786 EKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLD 845
Query: 1581 SSATA---YTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQI 1637
+++E L ++ + L ++ ++L+E+ + E+ +++ ++ L L+
Sbjct: 846 ELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESELAELKE 905
Query: 1638 VLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNE-----LTQLISTLQHQLQEARESLSAA 1692
+E+ + E+ LE L+ EL + E L + +L+E E+L
Sbjct: 906 EIEKLRERL-EELEAKLERLEVELPELEEELEEEYEDTLETELEREIERLEEEIEALGPV 964
Query: 1693 GRLSDQ-----------LNQKSQTIQELTEKVNQLMEELNKK 1723
+ + L + + ++E EK+ +++EEL+K+
Sbjct: 965 NLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEELDKE 1006
Score = 51.6 bits (124), Expect = 5e-06
Identities = 63/327 (19%), Positives = 129/327 (39%), Gaps = 19/327 (5%)
Query: 1423 KLKDLGGQVATLEKQLKTTSETLATKER----QLAETKEQLSLAQSQLEEVTQLMSSNDR 1478
L++L Q+ LE+Q + K +LA +L + +LEE+ + +S +
Sbjct: 194 LLEELEKQLEKLERQAEKAERYQELKAELRELELALLLAKLKELRKELEELEEELSRLEE 253
Query: 1479 PEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYN 1538
+ + E E EL L+ LQEE L EI +L + L
Sbjct: 254 ELEELQEELEEAEKEIEEL----KSELEELREELEELQEELLELKEEIEELEGEISLLRE 309
Query: 1539 ENERLK---QHLLKTEEDNTSELVKAEQTIQDLHVKLREAE-------ERVKSSATAYTS 1588
E L+ + L + E+ ++ ++ +++ L E E E + ++
Sbjct: 310 RLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSA 369
Query: 1589 ASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDN 1648
+ EAL ++ L + +++ +L + + ++ + L L LE + E
Sbjct: 370 LLEELEELFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELK- 428
Query: 1649 EIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQE 1708
E+ LE LQ EL + EL + + L+ +L+E L+ +L ++ +++
Sbjct: 429 ELEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEA 488
Query: 1709 LTEKVNQLMEELNKKEAKLKEVNNGGK 1735
+++ A L+ + +G
Sbjct: 489 RLDRLEAEQRASQGVRAVLEALESGLP 515
Score = 51.6 bits (124), Expect = 5e-06
Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 19/236 (8%)
Query: 93 NVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQ 152
+E E + L EE+ +L+ K L +EELE++L++ ++ +LE +
Sbjct: 766 ELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRER 825
Query: 153 LTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKAN--------ESAIAKKDEVIEKLKAE 204
L + L+EE++ L++KL +L+E + + + E+ + ++ +++L+ E
Sbjct: 826 LEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEE 885
Query: 205 LESVEKALREKESEVEE--WGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHE--TLIA 260
E +E+ LRE ESE+ E ++++ +LE+L VE EL E ++ TL
Sbjct: 886 KEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLET 945
Query: 261 KLEADLTRVKEEKEAEVSGKL-------EQDAMVKELKSKVETLEASLKQKEQELE 309
+LE ++ R++EE EA L E + +ELKS+ E LE + ++ + +E
Sbjct: 946 ELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIE 1001
Score = 50.1 bits (120), Expect = 1e-05
Identities = 69/368 (18%), Positives = 151/368 (41%), Gaps = 27/368 (7%)
Query: 650 LRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDT 709
+ +E KL E + + + + L+ + E+L+ + E+ E + +++
Sbjct: 170 YKERKEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAELRELELAL 229
Query: 710 LIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAK 769
L+ L+ ++EL L + L ++ E E L+ +L+ +I L +L +
Sbjct: 230 LLAKLKELRKELEEL---EEELSRLEEELEELQEELEEAE----KEIEELKSELEELREE 282
Query: 770 ISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNEN 829
+ EL EI +L ISL E L+ + +LE E+L+E EK + E
Sbjct: 283 LEELQEELLELKEEIEELEGEISLLRERLEELENELEELE----ERLEELKEKIEALKEE 338
Query: 830 IEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLE 889
+E +++L Q AE + ++ + L+A + + + L++ L
Sbjct: 339 LEERETLLEELEQL----------LAELEEAKEELEEKLSAL--LEELEELFEALREELA 386
Query: 890 SVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFS 949
++ E + ++N + + EI + L + E+ + +++ ELE+ L+ T+
Sbjct: 387 ELEAE----LAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELE 442
Query: 950 TKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQ 1009
+ + +L + + ++ + ++ EELQ L + L + +
Sbjct: 443 ELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAEQRASQG 502
Query: 1010 RVQELDAK 1017
L+A
Sbjct: 503 VRAVLEAL 510
Score = 47.8 bits (114), Expect = 6e-05
Identities = 51/234 (21%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 39 NSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYN 98
+ E + L+ E ++ +++ D + +S + + EL +E+
Sbjct: 787 KRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIE-----ELEEEIEELE 841
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
EK+ L EE+ +L+ + EL +EELE + ++ D+ K + + EE E+ +L
Sbjct: 842 EKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESELA 901
Query: 159 FLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESE 218
L+EE++ L+++L +L+ + ++ + E ++E + L+ ELE + L E+
Sbjct: 902 ELKEEIEKLRERLEELEAKLERLEV-ELPELEEELEEEYEDTLETELEREIERLEEEIEA 960
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEE 272
+ N A ++V+E E+L ++++L E + +I +L+ + +E
Sbjct: 961 LGPV-NLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEELDKEKRERFKE 1013
Score = 43.9 bits (104), Expect = 8e-04
Identities = 62/341 (18%), Positives = 149/341 (43%), Gaps = 16/341 (4%)
Query: 801 LQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQL 860
L+ + +LE L++ +E + + + +++L ++ + L+ +L + +L
Sbjct: 672 LEEELAELEAQLEKLEEELKSLKN----ELRSLEDLLEELRRQLEELERQL--EELKREL 725
Query: 861 VKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTEL 920
E+ L + + E ++L++ LE +++ + E L++L ++ ++ EL
Sbjct: 726 AALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALA-KLKEEIEEL 784
Query: 921 SIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMN 980
+ ++ ++ E + +L + + + + L +E ++ E ++
Sbjct: 785 EEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELE--- 841
Query: 981 EELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQ 1040
E+L L E L++ EE ++ L+E + +EL+ +L E K + + L EL
Sbjct: 842 EKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESELA 901
Query: 1041 DKLRSYTHVENELGQYRSKVYELE-QIQARLEAERTQWIHEFEVK-TNTLSDLQTQLDTY 1098
+ + L + +K+ LE ++ E ++ E + + L+ +++
Sbjct: 902 ELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIERLEEEIEAL 961
Query: 1099 ----NAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQE 1135
I VE+ E+K+Q + LE K++LL+ I+E
Sbjct: 962 GPVNLRAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEE 1002
Score = 38.2 bits (89), Expect = 0.048
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 1236 LKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTE--DLEYKLQEK 1293
LKE L E+ ++ ++ L+E+Q LE+ E + + E ELR E +L+ +L E
Sbjct: 234 LKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLEL 293
Query: 1294 EKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKE 1353
++ I+EL + + + + EE + L EL+ E+L+ E+ T ++ +++
Sbjct: 294 KEEIEELEGEISL--LRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQ 351
Query: 1354 TITYLEQYN--LQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEIL 1411
+ LE+ L+ S L ++ E L +L +I N +EI
Sbjct: 352 LLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELK----REIE 407
Query: 1412 RLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQ 1471
L L +L+DL ++ LE +L+ L +L E +EQL + +L+E+ +
Sbjct: 408 SLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELER 467
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily
archaeal type. SMC (structural maintenance of
chromosomes) proteins bind DNA and act in organizing and
segregating chromosomes for partition. SMC proteins are
found in bacteria, archaea, and eukaryotes. It is found
in a single copy and is homodimeric in prokaryotes, but
six paralogs (excluded from this family) are found in
eukarotes, where SMC proteins are heterodimeric. This
family represents the SMC protein of archaea and a few
bacteria (Aquifex, Synechocystis, etc); the SMC of other
bacteria is described by TIGR02168. The N- and C-terminal
domains of this protein are well conserved, but the
central hinge region is skewed in composition and highly
divergent [Cellular processes, Cell division, DNA
metabolism, Chromosome-associated proteins].
Length = 1164
Score = 69.3 bits (170), Expect = 2e-11
Identities = 69/332 (20%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 88 FELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKA 147
EL + D + KI + +E+ QL+ +E +L R+EELE+ L + ++V +L+E
Sbjct: 705 DELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
Query: 148 IEISQLTEHNRFLQEEMQSLKDKLRD------LDENVTVEDIKKANESAIAKKDEVIEKL 201
I +L E L+E + L+ +L E +E+ E+ + + ++ + +L
Sbjct: 765 ARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRL 824
Query: 202 KAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLI-- 259
E E +EK ++E + + + +++E+E L +K+EL E ++ E +
Sbjct: 825 TLEKEYLEKEIQELQEQRIDLKEQIK-----SIEKEIENLNGKKEELEEELEELEAALRD 879
Query: 260 -----AKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDN 314
L+ + ++ + E +A +++ + ++ L+A L+ E+EL D
Sbjct: 880 LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
Query: 315 DNWGSS--GNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWG 372
E +E ++ E + ++E++ E E + K+L E +
Sbjct: 940 KGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELK------- 992
Query: 373 NNDSWGGDNDKLATLQQENKVLNEKVSELQTQ 404
+K A L++E K + E++ E + +
Sbjct: 993 ---------EKRAKLEEERKAILERIEEYEKK 1015
Score = 63.5 bits (155), Expect = 1e-09
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 32/255 (12%)
Query: 95 EDYNEKIRALNE-EVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
E+ N+KI+ L E E ++K K EL + I LE + EK E+
Sbjct: 275 EELNKKIKDLGEEEQLRVKEKIGELEAEIASLER--------------SIAEKERELEDA 320
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKAN-ESAIAKKDEVIEKLKAELESVEKAL 212
E L+ E+ L ++ +L+ + E ++ A+ E +E L+AELE V+K
Sbjct: 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
Query: 213 REKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEE 272
E E++ D + +K E+ +L E L E +Q +A L A + ++ +
Sbjct: 381 AETRDELK-----DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAK 435
Query: 273 KEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKE 332
K ++ +K+ + K+E L A L + EQEL +++ + ++KE
Sbjct: 436 INELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY-----------DLKEEYDRVEKE 484
Query: 333 NEEIKEKLAKQESTL 347
+++ +LA+ E+
Sbjct: 485 LSKLQRELAEAEAQA 499
Score = 56.6 bits (137), Expect = 1e-07
Identities = 77/374 (20%), Positives = 152/374 (40%), Gaps = 43/374 (11%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
V +++ K EE+ +++ L I+E +L+ ++ E+ EKA
Sbjct: 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLE-RLRRER-------EKAERY--- 213
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
+ L +E + + ++ + E +A +E +EKL E+ +EK L
Sbjct: 214 ----QALLKEKREYEGYELLKEKEALERQKEAI-ERQLASLEEELEKLTEEISELEKRLE 268
Query: 214 EKE---SEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVK 270
E E E+ + + VKE++ +L E L I E + E L +++
Sbjct: 269 EIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
Query: 271 EEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALK 330
E + ++ E + ++E + + + L + ++ELE ++E +
Sbjct: 329 AEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL-----------RAELEEVD 377
Query: 331 KENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQE 390
KE E +++L L KLK L+++L + EL+ +++LA L
Sbjct: 378 KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL---------SEELADLNAA 428
Query: 391 NKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTI 450
+ K++EL+ + +KK+E LE EL +L+ + EK +
Sbjct: 429 IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLS---KYEQELYDLKEEYDRVEKEL 485
Query: 451 VELKSQ-EELLKQA 463
+L+ + E QA
Sbjct: 486 SKLQRELAEAEAQA 499
Score = 56.2 bits (136), Expect = 2e-07
Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 87 GFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEK 146
G+EL+ E + A+ +++ L+ + +L I ELE +L++ LEE
Sbjct: 225 GYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQL-------LEEL 277
Query: 147 AIEISQLTEHN-RFLQEEMQSLKDKLRDLDENVTV-EDIKKANESAIAKKDEVIEKLKAE 204
+I L E ++E++ L+ ++ L+ ++ E + E +AK + I+KL AE
Sbjct: 278 NKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAE 337
Query: 205 LESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQEL----IEVIQNHETLIA 260
+E +E+ + E+ ++ ++KEELE L E +E+ E +
Sbjct: 338 IEELEREIEEERKRRDKLTE-----EYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
Query: 261 KLEADLTRVKEEKEAEVSGKLEQ----DAMVKELKSKVETLEASLKQKEQELEGWTDNDN 316
KLE L R E + E+ E+ + +L + + +EA + + E+E E
Sbjct: 393 KLE-KLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKAL--- 448
Query: 317 WGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
+I+ + + E++ L+K E L LK + ++K+L + + EL E
Sbjct: 449 --------EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAE 494
Score = 55.8 bits (135), Expect = 2e-07
Identities = 62/319 (19%), Positives = 133/319 (41%), Gaps = 26/319 (8%)
Query: 583 LTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQV 642
L E L E+ + EL ++L A K +E+EI+QLE++ L+E+LE
Sbjct: 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE---- 741
Query: 643 DDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGK 702
L ++ L ++ NV++ E + L+ + EEL+E ++ E + +
Sbjct: 742 -------LEEDLSSLEQEIENVKS-------ELKELEARIEELEEDLHKLEEALNDLEAR 787
Query: 703 DSVD-IDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
S I + L +EE+ R+ ++ + L+ Q++ L +
Sbjct: 788 LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE 847
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE 821
+E +I LN + E+ +L + E L++ L+ +L+E
Sbjct: 848 QIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKER----DELEAQLRELER 903
Query: 822 KEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIEN 881
K IE ++ +L + + L+ EL +E +++ + +++ E
Sbjct: 904 KIEELEAQIEKKRKRLSELKAKLEALEEEL---SEIEDPKGEDEEIPEEELSLEDVQAEL 960
Query: 882 QQLKQNLESVKQENTLVVE 900
Q++++ + +++ N L ++
Sbjct: 961 QRVEEEIRALEPVNMLAIQ 979
Score = 55.5 bits (134), Expect = 3e-07
Identities = 82/405 (20%), Positives = 170/405 (41%), Gaps = 77/405 (19%)
Query: 325 DIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKL 384
+E LK+E ++ +L + E+ L +L +++ E E E+E+
Sbjct: 682 RLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQ-------------- 727
Query: 385 ATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCS 444
L+QE + L E++ EL+ L S+E+ ++ + +EL L A+
Sbjct: 728 --LEQEEEKLKERLEELEEDLSSLEQEIENVK-----------------SELKELEARIE 768
Query: 445 EFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSE 504
E E+ + +L+ L+ L S + +L+ L EE + +L E
Sbjct: 769 ELEEDLHKLEEALNDLEARLSH-----SRIPEIQA-------ELSKLEEEVSRIEARLRE 816
Query: 505 QKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIEN 564
+ +++L + E + + +Q D + +I+ + +E E L + E+L +E
Sbjct: 817 IEQKLNRLTLEKEYLE----KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEE 872
Query: 565 NYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQ 624
D L+ + L +E EL+ +L + K + LE +I++
Sbjct: 873 LEAALRD------------------LESRLGDLKKERDELEAQLRELERKIEELEAQIEK 914
Query: 625 LEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLI--NVEALVNQAQVEKQALDG-- 680
+ S L+ +LE+ ++ IE + + +L +V+A + + + E +AL+
Sbjct: 915 KRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVN 974
Query: 681 -----KYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEE 720
+YEE+ ++ +++ EK ++ I I+ + KK E
Sbjct: 975 MLAIQEYEEVLKRLDELKEKRAKLE-EERKAILERIEEYEKKKRE 1018
Score = 54.3 bits (131), Expect = 6e-07
Identities = 54/272 (19%), Positives = 114/272 (41%), Gaps = 13/272 (4%)
Query: 957 NKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDA 1016
++A L LE + E I ++ + L+ + + L++ + ++ + + +E + RV+E
Sbjct: 244 RQLASLEEELEKLTEE---ISELEKRLEEIEQLLEELN---KKIKDLGEEEQLRVKEKIG 297
Query: 1017 KLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQ 1076
+L EIAS I E ++++ +++L E E+ + +++ ELE+ R +
Sbjct: 298 ELEAEIASLERSIAEKERELEDAEERLAKL---EAEIDKLLAEIEELEREIEEERKRRDK 354
Query: 1077 WIHEFEVKTNTLSDLQTQLDTYNAK--ITHAAL--VEQELGEMKNQMQTLEYEKQELLKQ 1132
E+ L DL+ +L+ + + T L ++L ++K ++ L+ E L ++
Sbjct: 355 LTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEE 414
Query: 1133 IQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQY 1192
+Q S L + ++ + ++ + LE L A L +
Sbjct: 415 LQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDL 474
Query: 1193 KQMQIVYEDTQRKLNEELARRDATIATLNTTG 1224
K+ E KL ELA +A
Sbjct: 475 KEEYDRVEKELSKLQRELAEAEAQARASEERV 506
Score = 53.5 bits (129), Expect = 1e-06
Identities = 65/359 (18%), Positives = 145/359 (40%), Gaps = 38/359 (10%)
Query: 951 KEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQR 1010
+ Q + ++ L L S+Q+E I+ +EL + E++ + L++ +++
Sbjct: 675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEK 734
Query: 1011 VQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARL 1070
++E +L E+++S +E+++ +E + + +++LE+ L
Sbjct: 735 LKERLEELEEDLSSLE----------QEIENVKSELKELEARIEELEEDLHKLEEALNDL 784
Query: 1071 EAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELL 1130
EA + LS L+ ++ A++ +EQ+L + + + LE E QEL
Sbjct: 785 EARLSH--SRIPEIQAELSKLEEEVSRIEARLRE---IEQKLNRLTLEKEYLEKEIQELQ 839
Query: 1131 KQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNET 1190
+Q + ++ E+++L ++ + L L L+ + EL E
Sbjct: 840 EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDEL---EA 896
Query: 1191 QYKQMQIVYED---TQRKLNEELARRDATIATLNTTGA------------PDLNASIENI 1235
Q ++++ E+ K + L+ A + L + P+ S+E++
Sbjct: 897 QLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV 956
Query: 1236 LKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLS-----EKYQFEKEALELRTEDLEYK 1289
E E+ +QE + L++ K + E++A+ R E+ E K
Sbjct: 957 QAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
Score = 51.2 bits (123), Expect = 5e-06
Identities = 90/418 (21%), Positives = 179/418 (42%), Gaps = 88/418 (21%)
Query: 189 SAIAKKDEVIEKLKAELESVE------------------------------KALREKESE 218
+ +A+ D EK ELE VE +AL +++ E
Sbjct: 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKRE 222
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVS 278
E + A + KE +E+ + +E +E + + + K ++ ++ EE ++
Sbjct: 223 YEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK 282
Query: 279 GKLEQDAM-----VKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQ------DIE 327
E++ + + EL++++ +LE S+ +KE+ELE D + + + +IE
Sbjct: 283 DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELE---DAEERLAKLEAEIDKLLAEIE 339
Query: 328 ALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATL 387
L++E EE +++ K A+LK E L+ +L E + E E D+L
Sbjct: 340 ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAET---------RDELKDY 390
Query: 388 QQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFE 447
+++ + L +++EL+ +L ++E L++ +L D L A + E
Sbjct: 391 REKLEKLKREINELKRELDRLQEELQRLSEELAD-----------------LNAAIAGIE 433
Query: 448 KTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKV 507
I EL+ ++E + +E +L + ++DL+ +E L+++ +
Sbjct: 434 AKINELEEEKEDKALEIKKQEWKLEQ----------LAADLSKYEQELYDLKEEYDRVEK 483
Query: 508 IISKLKTQLEA--AQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIE 563
+SKL+ +L AQ S ++V+ + E+L +G+ V QLG V E
Sbjct: 484 ELSKLQRELAEAEAQARASE------ERVRGGRAVEEVLKASIQGVHGTVAQLGSVGE 535
Score = 50.8 bits (122), Expect = 8e-06
Identities = 85/440 (19%), Positives = 182/440 (41%), Gaps = 99/440 (22%)
Query: 243 VEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQ-DAMVKELKSKVETLEA-- 299
VE++++I+ I +A+ + + EE E EV +E+ D ++ E + ++E L
Sbjct: 153 VERRKIIDEIAG----VAEFDRKKEKALEELE-EVEENIERLDLIIDEKRQQLERLRRER 207
Query: 300 -------SLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKT 352
+L ++++E EG+ + E+ EA++++ ++E+L K +++L+
Sbjct: 208 EKAERYQALLKEKREYEGYELLKEKEA--LERQKEAIERQLASLEEELEKLTEEISELEK 265
Query: 353 HSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEAL 412
E +++ L E ++++ G E + EK+ EL+ ++ S+E ++
Sbjct: 266 RLEEIEQLLEELNKKIKDLGEE---------------EQLRVKEKIGELEAEIASLERSI 310
Query: 413 KKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELS 472
+KE +LED E E++ L A+ E E+ I E + + + L + + + EL
Sbjct: 311 AEKERELEDAEERLAKL---EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELE 367
Query: 473 EWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQ 532
+ ++L + +E R +L
Sbjct: 368 D----------LRAELEEVDKEFAETRDELK----------------------------- 388
Query: 533 QVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDE 592
D ++E L RE L+ +++L + +L+ E L+
Sbjct: 389 ---DYREKLEKLKREINELKRELDRL------------------QEELQRLSEELADLNA 427
Query: 593 EVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN 652
+ + + EL+++ E + K E +++QL D S ++L + D +EK
Sbjct: 428 AIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK---- 483
Query: 653 EIQELHAKLINVEALVNQAQ 672
E+ +L +L EA ++
Sbjct: 484 ELSKLQRELAEAEAQARASE 503
Score = 48.1 bits (115), Expect = 5e-05
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
+E+ ++ L EE ++LK + +L + +EE++ + + D+ K +LE+ EI++L
Sbjct: 345 IEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
LQEE+Q L ++L DL +AIA + I +L+ E E ++
Sbjct: 405 KRELDRLQEELQRLSEELADL-------------NAAIAGIEAKINELEEEKEDKALEIK 451
Query: 214 EKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEK 273
++E ++E+ + +L K E +L E E ++KL+ +L + +
Sbjct: 452 KQEWKLEQ------------LAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA 499
Query: 274 EAEVSGKLEQDAMVKELKSKVE 295
A A+ + LK+ ++
Sbjct: 500 RASEERVRGGRAVEEVLKASIQ 521
Score = 47.0 bits (112), Expect = 1e-04
Identities = 61/326 (18%), Positives = 127/326 (38%), Gaps = 44/326 (13%)
Query: 1408 QEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLE 1467
E+ R+ L E +L D ++ +EK+++ + + +L E +E LS + ++E
Sbjct: 695 SELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE 754
Query: 1468 EVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEIN 1527
V + E + + E + + + E R+ +Q E + L E+
Sbjct: 755 NVKSELK-----ELEARIEELEEDLHKLEEALN-DLEARLSHSRIPEIQAELSKLEEEV- 807
Query: 1528 DLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYT 1587
+ E + + + T E E+ IQ+L + + +E++KS
Sbjct: 808 ----------SRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE---- 853
Query: 1588 SASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKD 1647
+++E L + + L E+ E+L+ L E L + E+D
Sbjct: 854 -------KEIENLNGKKEELEEELEELEAALRDLES--------------RLGDLKKERD 892
Query: 1648 NEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQ 1707
AQ L L+ ++ A+ + + +S L+ +L+ E LS + + +
Sbjct: 893 ELEAQ-LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL 951
Query: 1708 ELTEKVNQLMEELNKKEAKLKEVNNG 1733
L E V ++ + ++ L+ VN
Sbjct: 952 SL-EDVQAELQRVEEEIRALEPVNML 976
Score = 46.6 bits (111), Expect = 1e-04
Identities = 52/259 (20%), Positives = 116/259 (44%), Gaps = 25/259 (9%)
Query: 1237 KEKDATLSEMLKKSEAKDKTLQEMQ---AALEKHLSEKYQFEKEALELRTEDLEYKLQEK 1293
++++ E+LK+ EA ++ + ++ A+LE+ L EK E LE R E++E L+E
Sbjct: 219 EKREYEGYELLKEKEALERQKEAIERQLASLEEEL-EKLTEEISELEKRLEEIEQLLEEL 277
Query: 1294 EKMIQELNEMKQSFF-----------------IGDSKDSVRYSDEEHVQ---ELRELQLM 1333
K I++L E +Q I + + + ++E + E+ +L
Sbjct: 278 NKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAE 337
Query: 1334 NESLQNEVLRSATEIDNMKETITYLEQ-YNLQLSKSQESSTTLTLLQSELAEQRTLNQQL 1392
E L+ E+ D + E L++ ++ +E + EL + R ++L
Sbjct: 338 IEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKL 397
Query: 1393 VQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQL 1452
+ +N E + +E+ RL+ L++ + + ++ LE++ + + + +E +L
Sbjct: 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
Query: 1453 AETKEQLSLAQSQLEEVTQ 1471
+ LS + +L ++ +
Sbjct: 458 EQLAADLSKYEQELYDLKE 476
Score = 46.6 bits (111), Expect = 1e-04
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 3/274 (1%)
Query: 1375 LTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATL 1434
L+ LQSEL +L Q ++ + +EI +L + +L++L +++L
Sbjct: 690 LSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
Query: 1435 EKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQ 1494
E++++ L E ++ E +E L + L ++ +S + PE E ++ E V++
Sbjct: 750 EQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSR 809
Query: 1495 HVAPV-ETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEED 1553
A + E ++ N L L + L++E L + DL+ ++ E E L + EE+
Sbjct: 810 IEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE 869
Query: 1554 NTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEK 1613
EL A + ++ L++ + +++ Q+E ++ L + E
Sbjct: 870 -LEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA 928
Query: 1614 LQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKD 1647
L+E+L + ED + + + LE QAE
Sbjct: 929 LEEELSEIEDPKGEDEEIPEEE-LSLEDVQAELQ 961
Score = 45.8 bits (109), Expect = 2e-04
Identities = 57/313 (18%), Positives = 134/313 (42%), Gaps = 31/313 (9%)
Query: 580 TAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESK 639
A+ +KE+ EE+ + + L +++ ++ + L E ++ E ++L+E+ E +
Sbjct: 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYE 224
Query: 640 DQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQ 699
++ L + + + +L ++E + + E L+ + EE+++ E++++K ++
Sbjct: 225 GYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL 284
Query: 700 TGKDSVDIDTLIKNLQSKKEELCRLLDEKNT---------------LDNIKVEKENLEIQ 744
++ + + I L+++ L R + EK +D + E E LE +
Sbjct: 285 GEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELERE 344
Query: 745 LDNLN---TNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFL 801
++ ++ L + DL A++ E++ +E+ D +++ L
Sbjct: 345 IEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEK-------L 397
Query: 802 QRSILDLERNLDEKLKEFNEKEIS---YNENIEASNHKIQQLTQETDTLKAELVAQAEST 858
+R I +L+R LD +E N I KI +L +E + E+ +
Sbjct: 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEI---KKQE 454
Query: 859 QLVKQEQALLAAA 871
++Q A L+
Sbjct: 455 WKLEQLAADLSKY 467
Score = 44.3 bits (105), Expect = 6e-04
Identities = 59/312 (18%), Positives = 130/312 (41%), Gaps = 41/312 (13%)
Query: 1423 KLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSS-NDRPEA 1481
+ +L + LE+Q + LA+ E +L + E++S + +LEE+ QL+ N + +
Sbjct: 224 EGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKD 283
Query: 1482 DGEPAQEREVVAQHVAPVETSRER-----NELALRLQNLQEEKTMLLTEINDLRLNQNTL 1536
GE Q R V + + +E E L++ +E L EI+ L L
Sbjct: 284 LGEEEQLR--VKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEEL 341
Query: 1537 YNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQ 1596
E E ++ K E E + ++ ++DL +L E ++ + +
Sbjct: 342 EREIEEERKRRDKLTE----EYAELKEELEDLRAELEEVDKEFAETRDELKDYREK---- 393
Query: 1597 VEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEF 1656
+E L ++ L + ++LQE+L + + + A++ ++ + + + EK+++ +
Sbjct: 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALE---- 449
Query: 1657 LQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQL 1716
I + +L++ LS +L + + +++++L
Sbjct: 450 ------------------IKKQEWKLEQLAADLSKY---EQELYDLKEEYDRVEKELSKL 488
Query: 1717 MEELNKKEAKLK 1728
EL + EA+ +
Sbjct: 489 QRELAEAEAQAR 500
Score = 41.6 bits (98), Expect = 0.005
Identities = 57/335 (17%), Positives = 127/335 (37%), Gaps = 27/335 (8%)
Query: 1038 ELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDT 1097
+ + L VE + + + E Q RL ER K L +
Sbjct: 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE--------KAERYQALLKEKRE 222
Query: 1098 YNAKITHAAL--VEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFS 1155
Y +E++ ++ Q+ +LE E ++L ++I E ++ L+ L
Sbjct: 223 YEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK 282
Query: 1156 VMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDA 1215
+ + E+ + E LEA++ L + + ++ E+ KL E+ + A
Sbjct: 283 DLGEE------EQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
Query: 1216 TIATLNT--TGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQ 1273
I L + E L ++ + E DK E + L+ + + +
Sbjct: 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEK 396
Query: 1274 FEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFF--------IGDSKDSVRYSDEEHVQ 1325
++E EL+ E L+ +E +++ +EL ++ + + + K+ ++
Sbjct: 397 LKREINELKRE-LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEW 455
Query: 1326 ELRELQLMNESLQNEVLRSATEIDNMKETITYLEQ 1360
+L +L + E+ E D +++ ++ L++
Sbjct: 456 KLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
Score = 41.6 bits (98), Expect = 0.005
Identities = 52/299 (17%), Positives = 110/299 (36%), Gaps = 26/299 (8%)
Query: 502 LSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLV 561
L ++K + + K +E + +++ + E R+E + + E L +++ LG
Sbjct: 228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG-- 285
Query: 562 IENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEE 621
+ + +L AE L+ + +E LE A E+ LE E
Sbjct: 286 --------EEEQLRVKEKIGELEAEIASLERSIAEKERE-------LEDAEERLAKLEAE 330
Query: 622 IQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGK 681
I +L + L ++E + + D + E EL +L ++ A + + E +
Sbjct: 331 IDKLLAEIEELEREIEEERKRRDKLT----EEYAELKEELEDLRAELEEVDKEFAETRDE 386
Query: 682 YEELKEKYEQMSEKFENQTGKDSVDIDTLIK---NLQSKKEELCRLLDEKNTLDNIKVEK 738
++ +EK E++ + + + L + L + + + N L+ K +K
Sbjct: 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDK 446
Query: 739 -ENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEE 796
++ Q L D Q DL+ + + E+ + + EE
Sbjct: 447 ALEIKKQEWKLEQLAADLS-KYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
Score = 41.2 bits (97), Expect = 0.006
Identities = 65/363 (17%), Positives = 152/363 (41%), Gaps = 18/363 (4%)
Query: 825 SYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVD-DNIVIENQQ 883
S ++ +++ L +E +L++EL + + L+ A I E +Q
Sbjct: 671 SEPAELQRLRERLEGLKRELSSLQSEL---RRIENRLDELSQELSDASRKIGEIEKEIEQ 727
Query: 884 LKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDA 943
L+Q E +K+ +E L+ ++ + EI +EL + + ++ E+ +LE L
Sbjct: 728 LEQEEEKLKER----LEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL-N 782
Query: 944 KLTDFSTKEQLNK--NKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDR 1001
L + ++ + ++++L + ++A I+Q L E L++ +E R
Sbjct: 783 DLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
Query: 1002 KILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVY 1061
L E + +++ L + ++ LE +++L+ +L ++ E + +++
Sbjct: 843 IDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLG---DLKKERDELEAQLR 899
Query: 1062 ELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQT 1121
ELE+ LEA+ + L L+ +L ++E+ E + ++
Sbjct: 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE----DEEIPEEELSLED 955
Query: 1122 LEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQ 1181
++ E Q + ++I+ + E + + +K A L E+ ++E E +
Sbjct: 956 VQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
Query: 1182 LKE 1184
+E
Sbjct: 1016 KRE 1018
Score = 40.4 bits (95), Expect = 0.011
Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 28/275 (10%)
Query: 37 SDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVED 96
S+ + E +L+ +K +E R K G + E S R+ E +ED
Sbjct: 261 SELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIG-ELEAEIASLERSIAEKERELED 319
Query: 97 YNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEH 156
E++ L E+ +L + EL IEE + + ++ + +LE+ E+ ++ +
Sbjct: 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKE 379
Query: 157 NRFLQEEMQSLKDKLRDL-DENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREK 215
++E++ ++KL L E ++ + + + E + L A + +E + E
Sbjct: 380 FAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINEL 439
Query: 216 ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEA 275
E E E D E++K + ++L + +E + L+ + RV++E
Sbjct: 440 EEEKE------------DKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE--- 484
Query: 276 EVSGKLEQDAMVKELKSKVETLEASLKQKEQELEG 310
+ +L+ ++ EA + E+ + G
Sbjct: 485 -----------LSKLQRELAEAEAQARASEERVRG 508
Score = 40.4 bits (95), Expect = 0.011
Identities = 68/404 (16%), Positives = 157/404 (38%), Gaps = 73/404 (18%)
Query: 680 GKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDE-KNTLDNIKVEK 738
+ +++ E+ E + + +LQS+ + LDE L + +
Sbjct: 667 LFSRSEPAELQRLRERLE--------GLKRELSSLQSELRRIENRLDELSQELSDASRKI 718
Query: 739 ENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENN 798
+E +++ L + + L + +LE +S L N +E+ +L RI
Sbjct: 719 GEIEKEIEQL----EQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE------ 768
Query: 799 AFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAEST 858
+LE +L + + N+ E + +I ++ E L+ E+
Sbjct: 769 --------ELEEDLHKLEEALNDLEARLSH------SRIPEIQAELSKLEEEVSRIEARL 814
Query: 859 QLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVT 918
+ ++Q+ K+ LE QE +L+ I + EI
Sbjct: 815 REIEQKLN-------------RLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNG 861
Query: 919 ELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQ 978
+ + E+ ++ E +LES L +L + ++A+ +++
Sbjct: 862 KKEELEEELEELEAALRDLESRL------------------GDLKKERDELEAQLRELER 903
Query: 979 MNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAE--EIASKTSIIQTLEIQV 1036
EEL+A E ++ + + + L ++ + E++ E EI + ++ ++ ++
Sbjct: 904 KIEELEAQIEKKRKRLSELKAKLEAL---EEELSEIEDPKGEDEEIPEEELSLEDVQAEL 960
Query: 1037 KELQDKLRSYTHVEN----ELGQYRSKVYELEQIQARLEAERTQ 1076
+ +++++R+ V E + ++ EL++ +A+LE ER
Sbjct: 961 QRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKA 1004
Score = 39.3 bits (92), Expect = 0.022
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 12/292 (4%)
Query: 845 DTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQN 904
L E + E +L+K+++AL + + ++ + L E +E ++
Sbjct: 214 QALLKEK-REYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQ 272
Query: 905 LIAQKDYEINAKVTELSI-IMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELS 963
L+ + + +I E + + EK + E + LE ++ K + E+ AE+
Sbjct: 273 LLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEID 332
Query: 964 AMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIA 1023
+L ++ I++ + LTE E ++ L++ + ++E+D + AE
Sbjct: 333 KLLAEIEELEREIEEERKRRDKLTEEYA-------ELKEELEDLRAELEEVDKEFAETRD 385
Query: 1024 SKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEV 1083
+ LE +E+ + R ++ EL + ++ +L A +EA+ + E E
Sbjct: 386 ELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKED 445
Query: 1084 KTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQE 1135
K + + +L+ A + + EQEL ++K + +E E +L +++ E
Sbjct: 446 KALEIKKQEWKLEQLAADL---SKYEQELYDLKEEYDRVEKELSKLQRELAE 494
Score = 38.9 bits (91), Expect = 0.029
Identities = 52/296 (17%), Positives = 116/296 (39%), Gaps = 23/296 (7%)
Query: 782 NEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLT 841
E L ++ E A L+ + L + E K E E + +E N KI+ L
Sbjct: 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIE----QLLEELNKKIKDLG 285
Query: 842 QETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVEN 901
+E E + E ++ E A L + +I + ++L+ E + ++
Sbjct: 286 EE------EQLRVKEKIGELEAEIASL-----ERSIAEKERELED-AEERLAKLEAEIDK 333
Query: 902 LQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAE 961
L I + + EI + + E+ + +++ L A+L + + ++++ +
Sbjct: 334 LLAEIEELEREIEEERKRRDKLTEEYAELKEE----LEDLRAELEEVDKEFAETRDELKD 389
Query: 962 LSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEE 1021
LE ++ E I ++ EL L E L++ S + + + ++ EL+ + ++
Sbjct: 390 YREKLEKLKRE---INELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDK 446
Query: 1022 IASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQW 1077
LE +L + ++ E + ++ +L++ A EA+
Sbjct: 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARAS 502
Score = 38.9 bits (91), Expect = 0.033
Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 38/261 (14%)
Query: 1502 SRERNELALRLQNLQEEK-----TMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTS 1556
RER + A R Q L +EK LL E L + + + L++ L E T
Sbjct: 204 RREREK-AERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL----EKLTE 258
Query: 1557 ELVKAEQTIQDLHVKLREAEERVK---SSATAYTSASVRSNQ-QVEALTSQVKSLTEQKE 1612
E+ + E+ ++++ L E +++K + + ++ +L + + E
Sbjct: 259 EISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELE 318
Query: 1613 KLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKD------NEIAQSLEFLQGELNNSYA 1666
+E+L + E + K A + L+ +E+ + +D E+ + LE L+ EL
Sbjct: 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
Query: 1667 K------------------NNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQE 1708
+ E+ +L L +E + L+ + I E
Sbjct: 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
Query: 1709 LTEKVNQLMEELNKKEAKLKE 1729
L E+ E+ K+E KL++
Sbjct: 439 LEEEKEDKALEIKKQEWKLEQ 459
Score = 35.4 bits (82), Expect = 0.34
Identities = 30/158 (18%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 1572 LREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQAS 1631
L+ R+++ + +++++ + +++ L +++EKL+E+L + E+ + +
Sbjct: 693 LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE 752
Query: 1632 LTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSA 1691
+ N++ L++ +A + E+ + L L+ LN+ A+ + I +Q +L + E +S
Sbjct: 753 IENVKSELKELEARIE-ELEEDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVS- 808
Query: 1692 AGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
R+ +L + Q + LT + L +E+ + + + +
Sbjct: 809 --RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRID 844
Score = 34.3 bits (79), Expect = 0.75
Identities = 64/317 (20%), Positives = 115/317 (36%), Gaps = 51/317 (16%)
Query: 1234 NILKEKDATLSEMLKKSEAKDKTLQE-------MQAALEKHLSEKYQFEKEALELRTEDL 1286
L++++ L E L++ E +L++ LE + E + + LE DL
Sbjct: 726 EQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEL-EEDLHKLEEALNDL 784
Query: 1287 EYKL-----QEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEV 1341
E +L E + + +L E + E Q+L L L E L+ E+
Sbjct: 785 EARLSHSRIPEIQAELSKLEEEVS---------RIEARLREIEQKLNRLTLEKEYLEKEI 835
Query: 1342 LRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHT 1401
+ ++KE I +E+ + + + L+ EL E + L
Sbjct: 836 QELQEQRIDLKEQIKSIEK------EIENLNGKKEELEEELEELEAALRDLES------- 882
Query: 1402 ESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSL 1461
+ +E L L E K+++L Q+ K+L L E +L+E ++
Sbjct: 883 RLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGE 942
Query: 1462 AQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPV---------ETSRERNELALRL 1512
+ EE L E Q E + + PV E + +EL +
Sbjct: 943 DEEIPEEELSL-------EDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKR 995
Query: 1513 QNLQEEKTMLLTEINDL 1529
L+EE+ +L I +
Sbjct: 996 AKLEEERKAILERIEEY 1012
Score = 32.0 bits (73), Expect = 3.8
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 1566 QDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVV 1625
Q L + RE E Q EA+ Q+ SL E+ EKL E++ + E +
Sbjct: 214 QALLKEKREYEGYELLKEKEALER------QKEAIERQLASLEEELEKLTEEISELEKRL 267
Query: 1626 QKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSY----AKNNELTQLISTLQHQ 1681
++ + L L ++ E+ + + + L+ E+ + K EL L
Sbjct: 268 EEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKL 327
Query: 1682 LQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEV 1730
E + L+ L ++ ++ + +LTE+ +L EEL A+L+EV
Sbjct: 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEV 376
Score = 31.6 bits (72), Expect = 4.9
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 13/206 (6%)
Query: 1407 HQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQL 1466
EI L ++E+ +L+D ++A LE ++ + ER++ E +++ +
Sbjct: 300 EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEY 359
Query: 1467 EEVTQLM--SSNDRPEADGEPAQEREVVAQHVAPVE-TSRERNELALRLQNLQEEKTMLL 1523
E+ + + + E D E A+ R+ + + +E RE NEL L LQEE L
Sbjct: 360 AELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLS 419
Query: 1524 TEINDLR------LNQNTLYNENERLKQHLLKTEEDNTSELV----KAEQTIQDLHVKLR 1573
E+ DL + E + K +K +E +L K EQ + DL +
Sbjct: 420 EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYD 479
Query: 1574 EAEERVKSSATAYTSASVRSNQQVEA 1599
E+ + A ++ E
Sbjct: 480 RVEKELSKLQRELAEAEAQARASEER 505
Score = 31.2 bits (71), Expect = 6.9
Identities = 19/93 (20%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 1643 QAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQK 1702
+ + + + LE L+ EL++ ++ + + L +L +A + + +QL Q+
Sbjct: 672 EPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE 731
Query: 1703 SQT----IQELTEKVNQLMEELNKKEAKLKEVN 1731
+ ++EL E ++ L +E+ +++LKE+
Sbjct: 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication,
recombination, and repair].
Length = 908
Score = 65.6 bits (160), Expect = 2e-10
Identities = 111/550 (20%), Positives = 243/550 (44%), Gaps = 36/550 (6%)
Query: 542 EMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQEN 601
E + E L +++L + E QE + + ++ + AE E E L +
Sbjct: 199 EDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKER---LEELK 255
Query: 602 IELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKL 661
L + +E K EEE+++LE L E++E ++++ IE+ L E++ L A L
Sbjct: 256 ARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEE-LEEELEGLRALL 314
Query: 662 INVEALVNQAQVEKQALDG---KYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKK 718
+E L+ + + ++ L+ K E+L+ + E+++E+ + L + L+ +
Sbjct: 315 EELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELE 374
Query: 719 EELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQH 778
+EL + L+ L+ E + +L Q+++ L + +LE ++ EL
Sbjct: 375 KELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELEELERELEELEEEIK 434
Query: 779 NKNNEINDLNKRISLFEENNAFLQRSIL---DLERNLDEKLKEFNEKEISYNENIEASNH 835
+IN L + + E ++ + +L +++L E E E+ E +
Sbjct: 435 KLEEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEKELLELYELELEELEEELSREK 494
Query: 836 KIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQEN 895
+ +L +E + L+ EL E + + + L ++L++ LE ++
Sbjct: 495 EEAELREEIEELEKELRELEEELIELLELEEAL------------KEELEEKLEKLENLL 542
Query: 896 TLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLN 955
+ E + L Q+ + ++ +L +++ K+ ++ + L T +L + + +
Sbjct: 543 EELEELKEKLQLQQ---LKEELRQLEDRLQELKELLEE-LRLLRTRKEELEELRERLKEL 598
Query: 956 KNKMAELSAMLESVQAE---------NISIKQMNEELQALTETLKQTSNTHEEDRKILDE 1006
K K+ EL L ++ +++ EEL++ E L + E + L+E
Sbjct: 599 KKKLKELEERLSQLEELLQSLELSEAENELEEAEEELESELEKLNLQAELEELLQAALEE 658
Query: 1007 YKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQI 1066
+++V+EL+A++ E+ + Q LE +++EL+ + EL + K+ E+EQ+
Sbjct: 659 LEEKVEELEAEIRRELQRIENEEQ-LEEKLEELEQLEEELEQLREELEELLKKLGEIEQL 717
Query: 1067 QARLEAERTQ 1076
LE+ + +
Sbjct: 718 IEELESRKAE 727
Score = 64.8 bits (158), Expect = 4e-10
Identities = 113/550 (20%), Positives = 242/550 (44%), Gaps = 30/550 (5%)
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
++ L +E+ L+ + EL E LE+ + ++ E L+ + E+ +L
Sbjct: 225 QEEEELEQEIEALEERLAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLE 284
Query: 159 FLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESE 218
L+E+++ L++ R+++E + +A + + +E++EKLK+ E +EK + E
Sbjct: 285 ELEEKIERLEELEREIEELEEELEGLRA---LLEELEELLEKLKSLEERLEKLEEKLEKL 341
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVS 278
E + +++ + LE+ + E +E +E ++ + L +E + E++
Sbjct: 342 ESE--LEELAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQELKEELA 399
Query: 279 GKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKE 338
E A ++E++ ++E LE L++ E+ELE E++I+ L+++ +++
Sbjct: 400 ---ELSAALEEIQEELEELEKELEELERELE-----------ELEEEIKKLEEQINQLES 445
Query: 339 KLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKV 398
K + Q+ E E EL E + ++ + ++E L E++
Sbjct: 446 KELMIAELAGAGEKCPVCGQELPEEHEKELLELYELELEE--LEEELSREKEEAELREEI 503
Query: 399 SELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEE 458
EL+ +L +EE L + E + +L NL + E ++ + + +EE
Sbjct: 504 EELEKELRELEEELIELLELEE---ALKEELEEKLEKLENLLEELEELKEKLQLQQLKEE 560
Query: 459 LLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEA 518
L + L D+ EL E + +L LRE L++KL E + + +QLE
Sbjct: 561 L--RQLEDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKE----LEERLSQLEE 614
Query: 519 AQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLD 578
Q + + + E E+ + + Q L V+E +
Sbjct: 615 LLQSLELSEAENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVEELEAEIRREL 674
Query: 579 NTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLES 638
+ + E EE+ L +E +L+++LE+ ++K +E+ I++LE + L E +
Sbjct: 675 QRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIEQLIEELESRKAELEELKKE 734
Query: 639 KDQVDDSIEK 648
++++ ++E
Sbjct: 735 LEKLEKALEL 744
Score = 54.8 bits (132), Expect = 4e-07
Identities = 138/641 (21%), Positives = 277/641 (43%), Gaps = 46/641 (7%)
Query: 196 EVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNH 255
EVI++ KA++E +E L E ++E+ +++KE + +++++ E ++
Sbjct: 178 EVIKEAKAKIEELEGQLSELLEDIED----LLEALEEELKELKKLEEIQEEQEEEELEQE 233
Query: 256 ETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDND 315
+ + A+L KE E + LE +++ E E L++ +ELE +
Sbjct: 234 IEALEERLAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEEKIER- 292
Query: 316 NWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQK---QLLEKEMELEEWG 372
E++IE L++E E ++ L + E L KLK+ E L+K +L + E ELEE
Sbjct: 293 ---LEELEREIEELEEELEGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELA 349
Query: 373 NNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDW----GEGDDW 428
N+ L++ K L E++ EL+ +L E LK+ E +++ E
Sbjct: 350 EE-----KNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQELKEELAELSAA 404
Query: 429 GTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSP----- 483
EL L + E E+ + EL+ + + L++ + E++ + G
Sbjct: 405 LEEIQEELEELEKELEELERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCG 464
Query: 484 -------SSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQD 536
L E L ++LS +K ++L+ ++E ++ + + ++
Sbjct: 465 QELPEEHEKELLELYELELEELEEELSREK-EEAELREEIEELEKELRELEEELIELLEL 523
Query: 537 RESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTV 596
E+ E L + E L +E+L + E +Q+ L E + L EE+ +
Sbjct: 524 EEALKEELEEKLEKLENLLEELEELKEKLQLQQLKEE---LRQLEDRLQELKELLEELRL 580
Query: 597 LSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIE-KTLRNEIQ 655
L EL++ E+ K L++++++LEE S L E L+S + + E + E++
Sbjct: 581 LRTRKEELEELR----ERLKELKKKLKELEERLSQLEELLQSLELSEAENELEEAEEELE 636
Query: 656 ELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTG--KDSVDIDTLIKN 713
KL L Q + L+ K EEL+ + + ++ EN+ + +++ L +
Sbjct: 637 SELEKLNLQAELEELLQAALEELEEKVEELEAEIRRELQRIENEEQLEEKLEELEQLEEE 696
Query: 714 LQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNT---NYQDKINTLIQSKNDLEAKI 770
L+ +EEL LL + ++ + E E+ + +L+ L + + L + + L
Sbjct: 697 LEQLREELEELLKKLGEIEQLIEELESRKAELEELKKELEKLEKALELLEELREKLGKAG 756
Query: 771 SELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERN 811
+ ++ + N+ +S N L+R + + N
Sbjct: 757 LRADILRNLLAQIEAEANEILSKLSLNRYDLRRLTIRKDGN 797
Score = 54.8 bits (132), Expect = 4e-07
Identities = 122/627 (19%), Positives = 266/627 (42%), Gaps = 64/627 (10%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQ 641
+ A+ E L+ +++ L ++ +L + LE+ +++ K LEE IQ+ +E+ + +E +++
Sbjct: 182 EAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEE-IQEEQEEEELEQEIEALEER 240
Query: 642 VDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTG 701
+ + E + ++EL A+L+ +E+L +A ++ + EL+ E++ EK E
Sbjct: 241 LAELEE--EKERLEELKARLLEIESLELEALKIREE---ELRELERLLEELEEKIER--- 292
Query: 702 KDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
++ L + ++ +EEL L L+ + + ++LE +L+ L + + L +
Sbjct: 293 -----LEELEREIEELEEELEGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEE 347
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE 821
+ L + +L K + E L+ +I +L+ L E E
Sbjct: 348 LAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEE 407
Query: 822 KEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIEN 881
+ E + ++L + + +K + + QL +E + A + +
Sbjct: 408 IQEELEELEKELEELERELEELEEEIKK---LEEQINQLESKELMIAELAGAGEKCPVCG 464
Query: 882 QQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTL 941
Q+L + E + L L + E+ +++ E ++ E ELE L
Sbjct: 465 QELPEEHE----------KELLELYELELEELEEELSREKEEAELREEIE----ELEKEL 510
Query: 942 DAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDR 1001
+ +L + EL LE ++ + EEL+ L E K +E+
Sbjct: 511 RELEEELIELLELEEALKEELEEKLE-------KLENLLEELEELKE--KLQLQQLKEEL 561
Query: 1002 KILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVY 1061
+ L++ Q ++EL +L K ++ L ++KEL+ KL+ +E L Q +
Sbjct: 562 RQLEDRLQELKELLEELRLLRTRK-EELEELRERLKELKKKLKE---LEERLSQLEELLQ 617
Query: 1062 ELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQT 1121
LE +A E E +L+++L+ N + L++ L E++ +++
Sbjct: 618 SLELSEAENELEE------------AEEELESELEKLNLQAELEELLQAALEELEEKVEE 665
Query: 1122 LEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQ 1181
LE E + L++I+ E L+ Q ++ + + E L++ +E
Sbjct: 666 LEAEIRRELQRIENEEQLEEKLEELEQLEEELEQLRE--------ELEELLKKLGEIEQL 717
Query: 1182 LKELADNETQYKQMQIVYEDTQRKLNE 1208
++EL + + ++++ E ++ L
Sbjct: 718 IEELESRKAELEELKKELEKLEKALEL 744
Score = 49.4 bits (118), Expect = 2e-05
Identities = 110/444 (24%), Positives = 193/444 (43%), Gaps = 56/444 (12%)
Query: 95 EDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLT 154
E+ EK+++L E + +L+ K +L S +EEL ++ + L
Sbjct: 318 EELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNEL-----------------AKLLE 360
Query: 155 EHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALRE 214
E + L+E ++ L+ +L E K E AI + E + +L A LE +++ L E
Sbjct: 361 ERLKELEERLEELEKELEKALER------LKQLEEAIQELKEELAELSAALEEIQEELEE 414
Query: 215 KESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEAD-------LT 267
E E+EE + EELE+ + + +E I +++ E +IA+L
Sbjct: 415 LEKELEE---------LERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCGQ 465
Query: 268 RVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIE 327
+ EE E E+ E + E + E EA L+++ +ELE + E
Sbjct: 466 ELPEEHEKELLELYELELEELEEELSREKEEAELREEIEELEKELRELEEELIELLELEE 525
Query: 328 ALKKENEEIKEKL--AKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLA 385
ALK+E EE EKL +E K K + L+++L + E L+E + L
Sbjct: 526 ALKEELEEKLEKLENLLEELEELKEKLQLQQLKEELRQLEDRLQE---LKELLEELRLLR 582
Query: 386 TLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWG--------TGNSTELN 437
T ++E + L E++ EL+ +L +EE L + E L+ + + E
Sbjct: 583 TRKEELEELRERLKELKKKLKELEERLSQLEELLQSLELSEAENELEEAEEELESELEKL 642
Query: 438 NLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEW----GQTNEWGSPSSSDLNTLRE 493
NL+A+ E + +E ++ +A I +E + E + E +L LRE
Sbjct: 643 NLQAELEELLQAALEELEEKVEELEAEIRRELQRIENEEQLEEKLEELEQLEEELEQLRE 702
Query: 494 ESGLLRQKLSEQKVIISKLKTQLE 517
E L +KL E + +I +L+++
Sbjct: 703 ELEELLKKLGEIEQLIEELESRKA 726
Score = 49.0 bits (117), Expect = 3e-05
Identities = 70/275 (25%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 95 EDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLT 154
+ E+I L +E+ +L+ + EL E L+++L++K++ + L E+ E+ +
Sbjct: 497 AELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLE----NLLEELEELKEKL 552
Query: 155 EHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALRE 214
+ + L+EE++ L+D+L++L E + + + + + + E +++LK +L+ +E+ L +
Sbjct: 553 QLQQ-LKEELRQLEDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKELEERLSQ 611
Query: 215 KESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKE 274
E ++ ++A ++ +EELE + E + + E L+ +L EE E
Sbjct: 612 LEELLQSLELSEAENELEEAEEELE----SELEKLNLQAELEELLQAALEELEEKVEELE 667
Query: 275 AEVSGKLEQDAMVKELKSK---VETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKK 331
AE+ +L++ ++L+ K +E LE L+Q +ELE E+ +E+ K
Sbjct: 668 AEIRRELQRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIEQLIEE-LESRKA 726
Query: 332 ENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEM 366
E EE+K++L K E L L+ E L K L ++
Sbjct: 727 ELEELKKELEKLEKALELLEELREKLGKAGLRADI 761
Score = 42.1 bits (99), Expect = 0.004
Identities = 109/590 (18%), Positives = 231/590 (39%), Gaps = 31/590 (5%)
Query: 1114 EMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLME 1173
E K +++ LE + ELL+ I++ A EL+ L++ + + +E L E
Sbjct: 182 EAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEA--LEE 239
Query: 1174 TKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIE 1233
LE + + L + + + +++ + + + EEL + + L L
Sbjct: 240 RLAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEE-KIERLEELER 298
Query: 1234 NILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEK 1293
I + + L + E ++ L+++++ E+ EK + + E LE E+L + E
Sbjct: 299 EIEELE-EELEGLRALLEELEELLEKLKSLEERL--EKLEEKLEKLESELEELAEEKNEL 355
Query: 1294 EKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKE 1353
K+++E + + + + ++E + L L+ + E++Q A ++E
Sbjct: 356 AKLLEERLKELE--------ERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEE 407
Query: 1354 TITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRL 1413
E+ + +E L L+ E+ + QL + + +
Sbjct: 408 ---IQEELEELEKELEELERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCG 464
Query: 1414 NGILSEELPKLKDL-GGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQL 1472
+ E +L +L ++ LE++L E +E KE L + +E +
Sbjct: 465 QELPEEHEKELLELYELELEELEEELSREKEEAELREEIEELEKELRELEEELIELLELE 524
Query: 1473 MSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLN 1532
+ + E E + + + + + +L L+ L++ L + +LRL
Sbjct: 525 EALKEELEEKLEKLENLLEELEEL---KEKLQLQQLKEELRQLEDRLQELKELLEELRLL 581
Query: 1533 QNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDL--HVKLREAEERVKSSATAYTSAS 1590
+ E + LK + EL + +++L ++L EAE ++ + S
Sbjct: 582 R--TRKEELEELRERLKELKKKLKELEERLSQLEELLQSLELSEAENELEEAEEELESEL 639
Query: 1591 VRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEI 1650
+ N Q L +++ E+ E+ E+L + + L+ LE+ + ++
Sbjct: 640 EKLNLQ-AELEELLQAALEELEEKVEELEAEIRRELQRIENEEQLEEKLEELE-----QL 693
Query: 1651 AQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLN 1700
+ LE L+ EL K E+ QLI L+ + E E +L L
Sbjct: 694 EEELEQLREELEELLKKLGEIEQLIEELESRKAELEELKKELEKLEKALE 743
Score = 40.9 bits (96), Expect = 0.007
Identities = 69/375 (18%), Positives = 145/375 (38%), Gaps = 19/375 (5%)
Query: 1377 LLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEK 1436
LL+ L ++L ++ + + +E+ + L E L +L++ ++ L+
Sbjct: 197 LLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKERLEELKA 256
Query: 1437 QLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHV 1496
+L + E +L +LEE + + E + E + E +
Sbjct: 257 RLLEIESLELEALKIREEELRELERLLEELEEKIERLE-----ELEREIEELEEELEGLR 311
Query: 1497 APVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTS 1556
A +E E E L+ E+ L ++ NE +L + LK E+
Sbjct: 312 ALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLE 371
Query: 1557 ELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQE 1616
EL K + + +L EA + +K ++A +++E L +++ L + E+L+E
Sbjct: 372 ELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELEELERELEELEE 431
Query: 1617 KLYQAEDVVQKHQASLTNLQIVLEQFQAEK--------DNEIAQSLEFLQGELNNSYAKN 1668
++ + E+ Q +Q L I EK E + L L +
Sbjct: 432 EIKKLEE--QINQLESKELMIAELAGAGEKCPVCGQELPEEHEKELLELYELELEELEEE 489
Query: 1669 NELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQEL----TEKVNQLMEELNKKE 1724
+ + L+ +++E + L +L + + ++E EK+ L+EEL + +
Sbjct: 490 LSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLENLLEELEELK 549
Query: 1725 AKLKEVNNGGKVDKC 1739
KL+ ++ +
Sbjct: 550 EKLQLQQLKEELRQL 564
Score = 33.2 bits (76), Expect = 1.6
Identities = 58/283 (20%), Positives = 108/283 (38%), Gaps = 15/283 (5%)
Query: 1436 KQLKTTSETLATKERQLAETKEQLSLA-QSQLEEVTQLMSSNDRPEADGEPAQEREVVAQ 1494
K+ K E L + +L E E L A + +L+E+ +L + E + + + +
Sbjct: 181 KEAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEER 240
Query: 1495 HVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLY----NENERLKQHLLKT 1550
E EL RL ++ + L + L + ERL++ +
Sbjct: 241 LAELEEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREI 300
Query: 1551 EEDNT--SELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLT 1608
EE L + +++L KL+ EER++ + E K L
Sbjct: 301 EELEEELEGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLE 360
Query: 1609 EQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKN 1668
E+ ++L+E+L + E ++K L L+ +++ + E A L +
Sbjct: 361 ERLKELEERLEELEKELEKALERLKQLEEAIQELKEELAELSA--------ALEEIQEEL 412
Query: 1669 NELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTE 1711
EL + + L+ +L+E E + +QL K I EL
Sbjct: 413 EELEKELEELERELEELEEEIKKLEEQINQLESKELMIAELAG 455
>gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional.
Length = 880
Score = 64.7 bits (158), Expect = 5e-10
Identities = 119/584 (20%), Positives = 249/584 (42%), Gaps = 51/584 (8%)
Query: 175 DENVTVEDIKKANESAIA-KKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDD 233
D + VE + ++ K ++ EK + +L L + +E++E +
Sbjct: 173 DARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDE--------EIER 224
Query: 234 VKEELEKLVVEKQELIEVIQNHE---TLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKEL 290
+E+ E+ + E EV++ HE + LEA++ ++E + E V++L
Sbjct: 225 YEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDL 284
Query: 291 KSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKL 350
+ ++E LE +L D+ + E E L+ +EE++++L +
Sbjct: 285 RERLEELEEER----DDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH 340
Query: 351 KTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEE 410
+ESL++ + E EE + +L ++ + E++ EL+ ++ + E
Sbjct: 341 NEEAESLREDADDLEERAEE--LREEAAELESELEEAREAVEDRREEIEELEEEIEELRE 398
Query: 411 ALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENE 470
+ D G +D+ E + LR + +E E T+ +E + + + + +
Sbjct: 399 RF---GDAPVDLGNAEDFLEELREERDELREREAELEATLRTA--RERVEEAEALLEAGK 453
Query: 471 LSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSH-- 528
E GQ E GSP + RE L +L + + + +++ +LE A+ +
Sbjct: 454 CPECGQPVE-GSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIE 512
Query: 529 -------PVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTA 581
+++ + +R IE E LR R +L + A
Sbjct: 513 RLEERREDLEELIAERRETIEEKRERAEELRERAAEL-----------EAEAEEKREAAA 561
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQ 641
+ E E EEV L+ + ELK+++E ++E+ + L I E++ LRE+ E+ +
Sbjct: 562 EAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDEIERLREKREALAE 620
Query: 642 VDDSIEKTL---RNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFEN 698
++D + L R +EL A+ EA + +A+ +K+ + E+++EK +++ E+ +
Sbjct: 621 LNDERRERLAEKRERKRELEAEF--DEARIEEAREDKERAEEYLEQVEEKLDELREE-RD 677
Query: 699 QTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLE 742
+ ++ ++ L+ +E L + L+ + E E LE
Sbjct: 678 DLQAEIGAVENELEELEELRERREALENRVEALEALYDEAEELE 721
Score = 51.2 bits (123), Expect = 6e-06
Identities = 120/601 (19%), Positives = 248/601 (41%), Gaps = 118/601 (19%)
Query: 104 LNEEVSQLKTKENELHSRIEELE---DKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFL 160
L+E ++ L+++ EL IE E ++ ++ D+ V + EE+ E+ L L
Sbjct: 204 LHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDL 263
Query: 161 QE-------EMQSLKDKLRDLDENVTVEDIKKANESAIAK---KDEVIEKLKAELESVEK 210
+E E + L +++RDL E +E++++ + +A+ D E ++A E +E
Sbjct: 264 RETIAETEREREELAEEVRDLRE--RLEELEEERDDLLAEAGLDDADAEAVEARREELED 321
Query: 211 ALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVK 270
E +EE A+ EE E L + +L E + A+LE++L +
Sbjct: 322 RDEELRDRLEE-----CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAR 376
Query: 271 EEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALK 330
E E ++ ++EL+ ++E L +L D +E L+
Sbjct: 377 EAVE-------DRREEIEELEEEIEELRERFGDAPVDLGNAEDF-----------LEELR 418
Query: 331 KENEEIKEKLAKQESTLAKLKTHSESLQK--QLLEK------EMELEEWGNNDSWGGDND 382
+E +E++E+ A+ E A L+T E +++ LLE +E + ++ D +
Sbjct: 419 EERDELREREAELE---ATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRE 475
Query: 383 KLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAK 442
++ L+ E + L E+V E++ +L E+
Sbjct: 476 RVEELEAELEDLEEEVEEVEERLERAEDL------------------------------- 504
Query: 443 CSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKL 502
E E I L+ + E L++ + ++ + E LRE + L +
Sbjct: 505 -VEAEDRIERLEERREDLEELIAERRETIEE----------KRERAEELRERAAELEAEA 553
Query: 503 SEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVI 562
E++ ++ + + E A+ ++V + S++ L E L L +
Sbjct: 554 EEKREAAAEAEEEAEEAR-----------EEVAELNSKLAELKERIESLERIRTLLAAI- 601
Query: 563 ENNYVQESDPMNNSLDNTA--------QLTAEKERLDEEVTVLSQENIE-LKKKLEQAVE 613
+ E + + + A +L ++ER E + IE ++ E+A E
Sbjct: 602 -ADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEE 660
Query: 614 KQKGLEEEIQQLEEDTSILREQLESKDQVDDSIE--KTLRNEIQELHAKLINVEALVNQA 671
+ +EE++ +L E+ L+ ++ + V++ +E + LR + L ++ +EAL ++A
Sbjct: 661 YLEQVEEKLDELREERDDLQAEIGA---VENELEELEELRERREALENRVEALEALYDEA 717
Query: 672 Q 672
+
Sbjct: 718 E 718
Score = 50.8 bits (122), Expect = 7e-06
Identities = 67/321 (20%), Positives = 131/321 (40%), Gaps = 42/321 (13%)
Query: 1425 KDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGE 1484
KDL ++ LE +L E + E Q + +E A LEE + + EA+ E
Sbjct: 202 KDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIE 261
Query: 1485 PAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLK 1544
+E ET RER ELA +++L+E L E +DL + E ++
Sbjct: 262 DLRE--------TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVE 313
Query: 1545 QHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQV 1604
+ E+ + LR+ E + +A A+ + + + L +
Sbjct: 314 ARREELEDRDEE---------------LRDRLEECRVAAQAHNEEAESLREDADDLEERA 358
Query: 1605 KSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDN------EIAQSLEFLQ 1658
+ L E+ +L+ +L +A + V+ + + L+ +E+ + + LE L+
Sbjct: 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELR 418
Query: 1659 GELNNSYAKNNELTQLISTLQHQLQEARESLSAAGR------------LSDQLNQKSQTI 1706
E + + EL + T + +++EA L AG+ + + + + +
Sbjct: 419 EERDELREREAELEATLRTARERVEEAEA-LLEAGKCPECGQPVEGSPHVETIEEDRERV 477
Query: 1707 QELTEKVNQLMEELNKKEAKL 1727
+EL ++ L EE+ + E +L
Sbjct: 478 EELEAELEDLEEEVEEVEERL 498
Score = 46.6 bits (111), Expect = 1e-04
Identities = 107/516 (20%), Positives = 227/516 (43%), Gaps = 56/516 (10%)
Query: 600 ENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHA 659
E +L ++L + L+EEI++ EE RE + D+V + E+ R E++ L A
Sbjct: 200 EEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEER-REELETLEA 258
Query: 660 KLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFEN---QTGKDSVDIDTL---IKN 713
++ ++ + + + E++ L + +L+E+ E++ E+ ++ + G D D + + +
Sbjct: 259 EIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE 318
Query: 714 LQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISEL 773
L+ + EEL L+E + E E ++ + +++ L + +LE+++ E
Sbjct: 319 LEDRDEELRDRLEECRV--AAQAHNEEAESLREDADD-LEERAEELREEAAELESELEEA 375
Query: 774 NNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEAS 833
A ++ EI +L + I E + + E L+E +E +E E +EA+
Sbjct: 376 REAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAE-LEAT 434
Query: 834 NHKIQQLTQETDTLKAE---------------LVAQAESTQLVKQEQALLAAAPVDDNIV 878
++ +E + L + E + V++ +A L + V
Sbjct: 435 LRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEV 494
Query: 879 IEN-QQLKQNLESVKQENTLV--VENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCI 935
E ++ + +E+ + L E+L+ LIA++ I K E+ ++ ++
Sbjct: 495 EERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEK-------RERAEELRERAA 547
Query: 936 ELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENIS--------------IKQMNE 981
ELE+ + K + E+ + E A L S AE I +
Sbjct: 548 ELEAEAEEKREAAAEAEE-EAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAED 606
Query: 982 ELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEE-IASKTSIIQTLEIQVKELQ 1040
E++ L E + + ++E R+ L E ++R +EL+A+ E I + E +++++
Sbjct: 607 EIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVE 666
Query: 1041 DKLRSYTH----VENELGQYRSKVYELEQIQARLEA 1072
+KL ++ E+G +++ ELE+++ R EA
Sbjct: 667 EKLDELREERDDLQAEIGAVENELEELEELRERREA 702
Score = 45.8 bits (109), Expect = 2e-04
Identities = 68/337 (20%), Positives = 141/337 (41%), Gaps = 48/337 (14%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
+ +NE+ +L E+ L+ + EL ELE +L++ + + ++EE
Sbjct: 337 AQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEE-------- 388
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLK---AELESVEK 210
L+EE++ L+++ D V + + + E ++DE+ E+ A L + +
Sbjct: 389 ------LEEEIEELRERFGDAP--VDLGNAEDFLEELREERDELREREAELEATLRTARE 440
Query: 211 ALREKES------------EVEEWGNNDAWGASDDVKEELEKLVVE-KQELIEVIQNHET 257
+ E E+ VE + + + EELE + + ++E+ EV + E
Sbjct: 441 RVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLER 500
Query: 258 L--IAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDND 315
+ + E + R++E +E E+ ++E + + E L + E E E
Sbjct: 501 AEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEK---- 556
Query: 316 NWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNND 375
+ ++E EE +E++A+ S LA+LK ESL++ + + + D
Sbjct: 557 -------REAAAEAEEEAEEAREEVAELNSKLAELKERIESLER-IRTLLAAIADAE--D 606
Query: 376 SWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEAL 412
+K L + N E+++E + + +E
Sbjct: 607 EIERLREKREALAELNDERRERLAEKRERKRELEAEF 643
Score = 44.6 bits (106), Expect = 6e-04
Identities = 64/310 (20%), Positives = 123/310 (39%), Gaps = 67/310 (21%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
+E+ E++ L E+ L+ + E+ R+E ED ++
Sbjct: 470 IEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVE----------------------- 506
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
++ ++ L+++ DL+E + I +K E E+L+ +E
Sbjct: 507 ------AEDRIERLEERREDLEELIAER------RETIEEKRERAEELRERAAELEAEAE 554
Query: 214 EKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEK 273
EK E A +++ +EE+ +L + EL E I++ E + L A +
Sbjct: 555 EKREAAAE-----AEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAA-----IADA 604
Query: 274 EAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKEN 333
E E+ E+ + EL + A +++++ELE D IE +++
Sbjct: 605 EDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR---------IEEAREDK 655
Query: 334 EEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKV 393
E +E L + E L +L+ + LQ ++ E ELEE L L++ +
Sbjct: 656 ERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEE-------------LEELRERREA 702
Query: 394 LNEKVSELQT 403
L +V L+
Sbjct: 703 LENRVEALEA 712
Score = 44.3 bits (105), Expect = 8e-04
Identities = 85/527 (16%), Positives = 184/527 (34%), Gaps = 66/527 (12%)
Query: 1200 EDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQE 1259
E L + A I + +E+ L E D + ++ E +T E
Sbjct: 179 ERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDE 238
Query: 1260 MQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYS 1319
LE+H E+ + E E LE EDL + E E+ +EL + VR
Sbjct: 239 ADEVLEEH--EERREELETLEAEIEDLRETIAETEREREEL------------AEEVR-- 282
Query: 1320 DEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQ 1379
+ + L EL+ + L E + + ++ LE ++ L +
Sbjct: 283 --DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELE--------DRDEELRDRLEE 332
Query: 1380 SELAEQRTLNQ--QLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQ 1437
+A Q + L + + + +E L L E ++D ++ LE++
Sbjct: 333 CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEE 392
Query: 1438 LKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSS--NDRPEADGEPAQEREVVAQH 1495
++ E L ++ L + + +E+ + + A + ++
Sbjct: 393 IEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAG 452
Query: 1496 VAP-VETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDN 1554
P E + ++ +E L E+ DL + ER +
Sbjct: 453 KCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAE---------- 502
Query: 1555 TSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKL 1614
+LV+AE I+ L + + EE + +E + + L E+ +L
Sbjct: 503 --DLVEAEDRIERLEERREDLEELIAERRE-----------TIEEKRERAEELRERAAEL 549
Query: 1615 QEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQL 1674
+ + + + + + + + + ++ E+ + +E L + L
Sbjct: 550 EAEAEEKREAAAEAEEEAEEAREEVAELNSKLA-ELKERIESL--------ERIRTLLAA 600
Query: 1675 ISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELN 1721
I+ + +++ RE A L++ +++ + + E E+ +L E +
Sbjct: 601 IADAEDEIERLREKREA---LAELNDERRERLAEKRERKRELEAEFD 644
Score = 40.0 bits (94), Expect = 0.013
Identities = 95/553 (17%), Positives = 205/553 (37%), Gaps = 73/553 (13%)
Query: 1225 APDLNASIENILKEKDATLSEMLKKSEAK-DKTLQEMQAALEKHLSE------KYQFEKE 1277
A D +E +L ++ +L ++ + E K +K L E LE L+E +Y+ ++E
Sbjct: 171 ASDARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQRE 230
Query: 1278 ALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSD---EEHVQELRELQLMN 1334
++ + L+E E+ +EL ++ I D ++++ ++ EE +E+R+L+
Sbjct: 231 QARETRDEADEVLEEHEERREELETLEAE--IEDLRETIAETEREREELAEEVRDLRERL 288
Query: 1335 ESL--QNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQ-- 1390
E L + + L + +D+ + L+ ++ L + +A Q +
Sbjct: 289 EELEEERDDLLAEAGLDDADAEAVEARREELE---DRDEELRDRLEECRVAAQAHNEEAE 345
Query: 1391 QLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKER 1450
L + + + +E L L E ++D ++ LE++++ E
Sbjct: 346 SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPV 405
Query: 1451 QLAETKEQLSLAQSQLEEVTQLMSS--NDRPEADGEPAQEREVVAQHVAP-VETSRERNE 1507
L ++ L + + +E+ + + A + ++ P E +
Sbjct: 406 DLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSP 465
Query: 1508 LALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQD 1567
++ +E L E+ DL + ER + +LV+AE I+
Sbjct: 466 HVETIEEDRERVEELEAELEDLEEEVEEVEERLERAE------------DLVEAEDRIER 513
Query: 1568 LHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQK 1627
L + + EE + +E + + L E+ +L+ + + + +
Sbjct: 514 LEERREDLEELIAERRE-----------TIEEKRERAEELRERAAELEAEAEEKREAAAE 562
Query: 1628 -HQASLTNLQIV--LEQFQAEKDNEI----------------AQSLEFLQGELNNSYAKN 1668
+ + + V L AE I +E L+ + N
Sbjct: 563 AEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELN 622
Query: 1669 N-------ELTQLISTLQHQLQEAR--ESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEE 1719
+ E + L+ + EAR E+ R + L Q + + EL E+ + L E
Sbjct: 623 DERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAE 682
Query: 1720 LNKKEAKLKEVNN 1732
+ E +L+E+
Sbjct: 683 IGAVENELEELEE 695
Score = 36.2 bits (84), Expect = 0.21
Identities = 108/623 (17%), Positives = 246/623 (39%), Gaps = 86/623 (13%)
Query: 1004 LDEYKQRVQELDAKLAEE--IASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVY 1061
L+EY++R DA+L E ++ + + L+ Q++E ++K + L S++
Sbjct: 164 LEEYRERAS--DARLGVERVLSDQRGSLDQLKAQIEEKEEK-----DLHERLNGLESELA 216
Query: 1062 ELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQT 1121
EL++ R E +R E T + L+ + + +E E+ +++ +
Sbjct: 217 ELDEEIERYEEQR-------EQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAE 269
Query: 1122 LEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQ 1181
E E++EL +++++ L+ L+ L++ + ++ + + + LE +
Sbjct: 270 TEREREELAEEVRD-------LRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDR 322
Query: 1182 LKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENI---LKE 1238
+EL D + + + + L E+ + L A +L + +E +++
Sbjct: 323 DEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREE-AAELESELEEAREAVED 381
Query: 1239 KDATLSEMLKKSEAKDKTLQEMQAALEK--HLSEKYQFEKEALELRTEDLEYKLQEKEKM 1296
+ + E+ ++ E + + L E+ + E++ L R +LE L+ +
Sbjct: 382 RREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARER 441
Query: 1297 IQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETIT 1356
++E + ++ + V HV+ + E + E L+ E+ E++ ++E +
Sbjct: 442 VEEAEALLEAGKCPECGQPVE--GSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLE 499
Query: 1357 YLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGI 1416
E + + L+ +AE+R
Sbjct: 500 RAEDLVEAEDRIERLEERREDLEELIAERRE----------------------------T 531
Query: 1417 LSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSN 1476
+ E+ + ++L + A LE + + E A E + E +E+++ S+L E+ + + S
Sbjct: 532 IEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL 591
Query: 1477 DRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTL 1536
+R + ++ L+ EK L E+ND R + L
Sbjct: 592 ERIRTLLA-------------------AIADAEDEIERLR-EKREALAELNDER--RERL 629
Query: 1537 YNENERLKQHLLKTEEDNTSEL----VKAEQTIQDLHVKLREAEERVKSSATAYTSASVR 1592
+ ER ++ + +E E +AE+ ++ + KL E E + A A
Sbjct: 630 AEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREE-RDDLQAEIGAVEN 688
Query: 1593 SNQQVEALTSQVKSLTEQKEKLQ 1615
+++E L + ++L + E L+
Sbjct: 689 ELEELEELRERREALENRVEALE 711
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 58.5 bits (142), Expect = 3e-08
Identities = 121/617 (19%), Positives = 265/617 (42%), Gaps = 77/617 (12%)
Query: 227 AWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAM 286
A+ +V +E+++ + ++ I+ +N E LI + E +L V E
Sbjct: 163 AYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLRE-------------- 208
Query: 287 VKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQEST 346
+ E+ S++ L L++ E+E++ ++E LK+E EE++++L E +
Sbjct: 209 INEISSELPELREELEKLEKEVK---------------ELEELKEEIEELEKELESLEGS 253
Query: 347 LAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLL 406
KL+ L++++ E + E+EE + K +E K+SE + L
Sbjct: 254 KRKLEEKIRELEERIEELKKEIEEL-------EEKVKELKELKEKAEEYIKLSEFYEEYL 306
Query: 407 SVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALID 466
++K+ + LE+ E+N + + E E+ L+ ++ LK+ L
Sbjct: 307 DELREIEKRLSRLEE-------------EINGIEERIKELEEKEERLEELKKKLKE-LEK 352
Query: 467 KENELSEWGQTNEWGSPSSSDLNTLREE-SGLLRQKLSEQKVIISKLKTQLEAAQQGTSS 525
+ EL E + E +L L++ +GL +KL ++ + K K ++E ++
Sbjct: 353 RLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITA 412
Query: 526 HSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTA 585
+ +++++ + IE L + + + G + + + + ++
Sbjct: 413 RIGELKKEIKELKKAIEEL----KKAKGKCPVCGRELTEEH--RKELLEEYTAELKRIEK 466
Query: 586 EKERLDEEVTVLSQENIELKKKL--EQAVEKQKGLEEEIQQLEEDTS-ILREQLESKDQV 642
E + ++E+ L +E EL+K L E + K K L E++++LEE E+LE K +
Sbjct: 467 ELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEE 526
Query: 643 DDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGK 702
+ L+ ++ +L ++ +++ + + + L K EL++K +++ E+ +
Sbjct: 527 ----YEKLKEKLIKLKGEIKSLKKELE----KLEELKKKLAELEKKLDELEEELAELLKE 578
Query: 703 DSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQS 762
++ L+ + +EL +E L + + E E E +L L L ++
Sbjct: 579 LEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAET 638
Query: 763 KNDLEAKISELNNAQ--------HNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE 814
+ LE EL + E +L++ ++ L++ ++++ L E
Sbjct: 639 EKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTL-E 697
Query: 815 KLKEFNEKEISYNENIE 831
KLKE E+ + +E
Sbjct: 698 KLKEELEEREKAKKELE 714
Score = 50.4 bits (121), Expect = 1e-05
Identities = 131/607 (21%), Positives = 259/607 (42%), Gaps = 93/607 (15%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
E+ + + E++ L +EV +L+ EL IEELE +L+ ++ LEEK
Sbjct: 211 EISSELPELREELEKLEKEVKELE----ELKEEIEELEKELESLEGSKRK----LEEK-- 260
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESV 208
I +L E L++E++ L++K+++L E + +K E KL E
Sbjct: 261 -IRELEERIEELKKEIEELEEKVKELKE--------------LKEKAEEYIKLSEFYEEY 305
Query: 209 EKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTR 268
LRE +++ L +L E + E I+ E +LE +
Sbjct: 306 LDELRE-------------------IEKRLSRLEEEINGIEERIKELEEKEERLEELKKK 346
Query: 269 VKE--EKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDI 326
+KE ++ E+ + E K K ++E L+ L E E+++
Sbjct: 347 LKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPE-------------KLEKEL 393
Query: 327 EALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKE----------MELEEWGNNDS 376
E L+K EEI+E+++K + + +LK + L+K + E + EL E +
Sbjct: 394 EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL 453
Query: 377 WGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTEL 436
+L +++E K + EK +L+ +L +E+ LKK+ ++ + +L
Sbjct: 454 LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAE--------QL 505
Query: 437 NNLRAKCSEFEKTIVELKSQE-ELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREES 495
L K ++ +E K++E E LK+ LI + E+ + E L L ++
Sbjct: 506 KELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKL 565
Query: 496 GLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQ---VQDRESRIEMLSRENEGLR 552
L ++L+E + +L + + P + ++D E +E +E + L
Sbjct: 566 DELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLE 625
Query: 553 TRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERL--DEEVTVLSQENIELKKKLEQ 610
+++ +E L+ + E E+ +EE L +E +EL ++L
Sbjct: 626 EELDKA--------FEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAG 677
Query: 611 AVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEK--TLRNEIQELHAKLINVEALV 668
+ + LE+ +++++ L+E+LE +++ +EK ++EL K+ +AL+
Sbjct: 678 LRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALL 737
Query: 669 NQAQVEK 675
+ + K
Sbjct: 738 KERALSK 744
Score = 46.6 bits (111), Expect = 1e-04
Identities = 112/529 (21%), Positives = 236/529 (44%), Gaps = 73/529 (13%)
Query: 586 EKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDS 645
E E L EE+ L +E L+ + EK + LEE I++L+++ L E+++ ++ +
Sbjct: 232 ELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEK 291
Query: 646 IEK--TLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKD 703
E+ L +E +L +E +++ + E ++ + +EL+EK E++ E
Sbjct: 292 AEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEE--------- 342
Query: 704 SVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSK 763
+ +K L+ + EEL + K E E L+ +L L +
Sbjct: 343 ---LKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGL-------------TP 386
Query: 764 NDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE------KLK 817
LE ++ EL A+ EI+ + RI ++ L+++I +L++ + +L
Sbjct: 387 EKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT 446
Query: 818 EFNEKEI--SYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDD 875
E + KE+ Y ++ +++++ ++ L+ EL E +++K+E L+ + +
Sbjct: 447 EEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELR---ELEKVLKKESELIKLKELAE 503
Query: 876 NIV-IENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKC 934
+ +E + K NLE ++++ + + LI ++ ++ L +EK ++ + K
Sbjct: 504 QLKELEEKLKKYNLEELEKKAEEYEKLKEKLI-----KLKGEIKSLKKELEKLEELKKKL 558
Query: 935 IELESTLD---AKLTDFSTK-EQLNKNKMAELSAM---LESVQAENISIKQMNEELQALT 987
ELE LD +L + + E+L + EL LE E + +K +EL+
Sbjct: 559 AELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREE 618
Query: 988 ETLKQTSNTHEEDRKILDEYKQRVQELDAKLAE----------------------EIASK 1025
+ LK+ ++ + L E ++R++EL +L E E+A
Sbjct: 619 KELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGL 678
Query: 1026 TSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAER 1074
+ ++ LE + +E++ L E + + ++ +LE+ R+E R
Sbjct: 679 RAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELR 727
Score = 45.8 bits (109), Expect = 2e-04
Identities = 111/578 (19%), Positives = 243/578 (42%), Gaps = 78/578 (13%)
Query: 900 ENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELES---TLDAKLTDFSTKEQLNK 956
EN++ LI +K+ E+ + E++ I + + ++ +LE L+ + E+ +
Sbjct: 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELE 248
Query: 957 NKMAELSAMLESVQAENISIKQMNEELQALTE------TLKQTSNTHEEDRKILDEYKQR 1010
+ + E ++ I+++ +E++ L E LK+ + + + + +EY
Sbjct: 249 SLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDE 308
Query: 1011 VQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARL 1070
++E++ + ++ I +E ++KEL++K E L + + K+ ELE+ L
Sbjct: 309 LREIE----KRLSRLEEEINGIEERIKELEEK-------EERLEELKKKLKELEKRLEEL 357
Query: 1071 EAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELL 1130
E E + +L+ ++T +++ +++ LE K+E+
Sbjct: 358 E--------ERHELYEEAKAKKEELERLKKRLT-----GLTPEKLEKELEELEKAKEEIE 404
Query: 1131 KQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLL---------EKNTLMETKLTLEAQ 1181
++I + + LK E++ L+ A +K + K L E L+
Sbjct: 405 EEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRI 464
Query: 1182 LKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDA 1241
KEL + E + ++++ + ++ L +E + + L + +E LK+ +
Sbjct: 465 EKELKEIEEKERKLRKELRELEKVLKKE-----SELIKLKELA--EQLKELEEKLKKYNL 517
Query: 1242 TLSEMLKKSEAKDKTLQEMQAALEKHLS--EKYQFEKEALELRTEDLEYKLQEKEKMIQE 1299
E L+K + + L+E L+ + +K + E L+ + +LE KL E E+ + E
Sbjct: 518 ---EELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAE 574
Query: 1300 LNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLE 1359
L + + ++ EE ++EL E NE L ++ L+
Sbjct: 575 LLKELEELGFESVEE-----LEERLKEL-------EPFYNEYLELKDAEKELEREEKELK 622
Query: 1360 QYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSE 1419
+ +L K+ E L + L E R ++L + + + ++E+ LS
Sbjct: 623 KLEEELDKAFEE---LAETEKRLEELRKELEELEKKYSEEE------YEELREEYLELSR 673
Query: 1420 ELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKE 1457
EL L+ ++ LEK+ + +TL + +L E ++
Sbjct: 674 ELAGLRA---ELEELEKRREEIKKTLEKLKEELEEREK 708
Score = 44.7 bits (106), Expect = 6e-04
Identities = 128/576 (22%), Positives = 257/576 (44%), Gaps = 59/576 (10%)
Query: 956 KNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELD 1015
K ++ L ++ + IK+ +EL+ + + + S+ E R+ L++ ++ V+EL+
Sbjct: 175 KRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE 234
Query: 1016 AKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLE---- 1071
+L EEI +++LE ++L++K+R +E + + + ++ ELE+ L+
Sbjct: 235 -ELKEEIEELEKELESLEGSKRKLEEKIRE---LEERIEELKKEIEELEEKVKELKELKE 290
Query: 1072 -AERTQWIHEFEVKTNT-LSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQEL 1129
AE + EF + L +++ +L +I +EL E + +++ L+ + +EL
Sbjct: 291 KAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKEL 350
Query: 1130 LKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNE 1189
K+++E L+ + ++A + + LE+ T LT E KEL + E
Sbjct: 351 EKRLEE-------LEERHELYEEAKAKKEE------LERLKKRLTGLTPEKLEKELEELE 397
Query: 1190 TQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKK 1249
+++ E+ K+ + ++ +KE + E LKK
Sbjct: 398 KAKEEI----EEEISKITARIG-------------------ELKKEIKELKKAIEE-LKK 433
Query: 1250 SEAKDKTL-QEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFF 1308
++ K +E+ K L E+Y E + +E +++E K ++ K ++EL +
Sbjct: 434 AKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL----EKVL 489
Query: 1309 IGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQ----YNLQ 1364
+S+ E ++EL E + + E+ + A E + +KE + L+ +
Sbjct: 490 KKESELIKLKELAEQLKELEEK--LKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKE 547
Query: 1365 LSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKL 1424
L K +E L L+ +L E +L++ + ES +E L+ E +L
Sbjct: 548 LEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLEL 607
Query: 1425 KDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGE 1484
KD ++ EK+LK E L +LAET+++L + +LEE+ + S + E E
Sbjct: 608 KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREE 667
Query: 1485 PAQEREVVAQHVAPVETSRE-RNELALRLQNLQEEK 1519
+ +A A +E + R E+ L+ L+EE
Sbjct: 668 YLELSRELAGLRAELEELEKRREEIKKTLEKLKEEL 703
Score = 31.2 bits (71), Expect = 6.7
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 1547 LLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKS 1606
+K + + +K + I++L + + E V +S +++E L +VK
Sbjct: 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKE 232
Query: 1607 LTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYA 1666
L E KE+++E + E + + + L LE+ E EI + LE EL
Sbjct: 233 LEELKEEIEELEKELESL-EGSKRKLEEKIRELEERIEELKKEI-EELEEKVKELKELKE 290
Query: 1667 KNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAK 1726
K E +L + L E RE RL +++N + I+EL EK +L E K +
Sbjct: 291 KAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKEL 350
Query: 1727 LKEVN 1731
K +
Sbjct: 351 EKRLE 355
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain. This domain is
found at the N terminus of SMC proteins. The SMC
(structural maintenance of chromosomes) superfamily
proteins have ATP-binding domains at the N- and
C-termini, and two extended coiled-coil domains
separated by a hinge in the middle. The eukaryotic SMC
proteins form two kind of heterodimers: the SMC1/SMC3
and the SMC2/SMC4 types. These heterodimers constitute
an essential part of higher order complexes, which are
involved in chromatin and DNA dynamics. This family also
includes the RecF and RecN proteins that are involved in
DNA metabolism and recombination.
Length = 1162
Score = 57.7 bits (139), Expect = 6e-08
Identities = 137/844 (16%), Positives = 294/844 (34%), Gaps = 14/844 (1%)
Query: 97 YNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEH 156
EK + ++ EN I+ E KLQ+ E++ + E +L E
Sbjct: 166 SREKRKKKERLKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEE 225
Query: 157 NRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKE 216
N + ++ ++++ L E + + E +K++ E+ E EKE
Sbjct: 226 NLLYLDYLKLNEERIDLLQELLR----DEQEEIESSKQELEKEEEILAQVLKENKEEEKE 281
Query: 217 SEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAE 276
+++E +++K EL KL K + E ++ E + KLE +L + KEE E
Sbjct: 282 KKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEEL 341
Query: 277 VSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEI 336
E + + E E L++ +++LE + + + + K EE
Sbjct: 342 EKELKELEI----KREAEEEEEEQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEE 397
Query: 337 KEKLAKQESTLAKLKTHSESLQKQLLE--KEMELEEWGNNDSWGGDNDKLATLQQENKVL 394
E ++E L SE + L E KE +S KL ++E +
Sbjct: 398 LELKNEEEKEAKLLLELSEQEEDLLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQ 457
Query: 395 NEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELK 454
K+ + + +L E+ LK+ + E + +K E ++ L
Sbjct: 458 ALKLLKDKLELKKSEDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALI 517
Query: 455 SQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKT 514
L+ N + S + + E S + + QK++ + +
Sbjct: 518 KDGVGLRIISAAGRGGDLGVAVANYKVAISVAVIV---EVSAVADEVDERQKLVRALTEL 574
Query: 515 QLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMN 574
L A + + L+ T
Sbjct: 575 PLPARTFVLLDPLLKLPLKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGILKDTE 634
Query: 575 NSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILRE 634
+ + E L + V++ + + K + ++ L E+ Q + ++ + +
Sbjct: 635 LTKLLESAKAKE-SGLRKGVSLEEGLAEKSELKASLSELTKELLAEQELQEKAESELAKN 693
Query: 635 QLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSE 694
++ + + E+ ++ E+++L + + A Q +K + K E K K ++ E
Sbjct: 694 EILRRQEEIKKKEQRIKEELKKLKLEKEELLADKVQEAQDKINEELKLLEQKIKEKEEEE 753
Query: 695 KFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQD 754
+ ++ + + + + + E ++ + + + + E +L L ++
Sbjct: 754 EKSRLKKEEEEEEKSELSLKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKE 813
Query: 755 KINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE 814
+ L + + +E + E+ + K L EE L+ I E +
Sbjct: 814 EAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQEL 873
Query: 815 KLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVD 874
LKE +E + +E+ K ++ +E + + E +++ A A +
Sbjct: 874 LLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKDNLLEEKENEIEERIAEEAIILLK 933
Query: 875 DNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKC 934
E L++ E K+E+ E +N E V ++I + K+
Sbjct: 934 YESEPEELLLEEADEKEKEEDNKEEEEERNKRLLLAKEELGNVNLMAIAEFEEKEERYNK 993
Query: 935 IELE 938
EL+
Sbjct: 994 DELK 997
Score = 49.2 bits (117), Expect = 3e-05
Identities = 115/806 (14%), Positives = 269/806 (33%), Gaps = 27/806 (3%)
Query: 682 YEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENL 741
+ KE+ +++ E+ EN + ++ L+ K++ L + E+ L
Sbjct: 169 KRKKKERLKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENLL 228
Query: 742 EIQLDNLNTNYQDKINTLIQSKN----------DLEAKISELNNAQHNKNNEINDLNKRI 791
+ LN D + L++ + + E +I ++ + + L +
Sbjct: 229 YLDYLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEE 288
Query: 792 SLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAEL 851
+S L +E ++ + +E K ++ +E + EL
Sbjct: 289 LKLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKEL 348
Query: 852 VA--QAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQK 909
+AE + + E+ +++ ++ + + + L S + +E +
Sbjct: 349 EIKREAEEEEEEQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEKEA 408
Query: 910 DYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFST-----KEQLNKNKMAELSA 964
+ E ++ E+ K+ ELE +L+ K + ++Q K +L
Sbjct: 409 KLLLELSEQEEDLLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQALKLLKDKLEL 468
Query: 965 MLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIAS 1024
+ + ++ E+L+ L K + +E + D I++
Sbjct: 469 KKSEDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGLRIISA 528
Query: 1025 KTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHE-FEV 1083
+ + + + +L + L ++ +
Sbjct: 529 AGRGGDLGVAVANYKVAISVAVIVEVSAVADEVDERQKLVRALTELPLPARTFVLLDPLL 588
Query: 1084 KTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFL 1143
K S ++D + + K K L ++ E + A
Sbjct: 589 KLPLKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGILKDTELTKLLESAKAKESG 648
Query: 1144 KNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQ 1203
+ SL++ + ASL L+ + E ELA NE +Q +I ++ +
Sbjct: 649 LRKGVSLEEGLAEKSELKASLSELTKELLAEQELQEKAESELAKNEILRRQEEIKKKEQR 708
Query: 1204 RKLNEELARRDATI--ATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQ 1261
K + + + A +N ++ + ++ E K K++ +E
Sbjct: 709 IKEELKKLKLEKEELLADKVQEAQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKS 768
Query: 1262 AALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDE 1321
K + EK E+ E KL+ +E+ ++ L E + ++ + E
Sbjct: 769 ELSLKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQE 828
Query: 1322 EHVQEL-RELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLL-- 1378
E ++E E + + ++ + A E E E+ +L +E L
Sbjct: 829 EKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDE 888
Query: 1379 ----QSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATL 1434
+ + E++ ++ Q N + N + I IL + + ++L + A
Sbjct: 889 LESKEEKEKEEKKELEEESQKDNLLEEKENEIEERIAEEAIILLKYESEPEELLLEEADE 948
Query: 1435 EKQLKTTSETLATKERQLAETKEQLS 1460
+++ + E + ++L KE+L
Sbjct: 949 KEKEEDNKEEEEERNKRLLLAKEELG 974
Score = 46.5 bits (110), Expect = 1e-04
Identities = 127/847 (14%), Positives = 285/847 (33%), Gaps = 56/847 (6%)
Query: 235 KEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKV 294
KE L+KL+ E + L E+I I E L +K +++A K + + K ++
Sbjct: 173 KERLKKLIEETENLAELI------IDLEELKLQELKLKEQA----KKALEYYQLKEKLEL 222
Query: 295 ETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHS 354
E + E D +++IE+ K+E E+ +E LA+ + +
Sbjct: 223 EEENLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEK 282
Query: 355 ESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKK 414
+ +++L E EE + +L L++ EK+ E + +L +E+ LKK
Sbjct: 283 KLQEEELKLLAKEEEELKS---------ELLKLERRKVDDEEKLKESEKELKKLEKELKK 333
Query: 415 KENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALID-------- 466
++ ++E+ EL L K E+ +L+ +E L+Q +
Sbjct: 334 EKEEIEE----------LEKELKELEIKREAEEEEEEQLEKLQEKLEQLEEELLAKKKLE 383
Query: 467 KENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSH 526
E S E + + + L Q+ K + +E ++ +
Sbjct: 384 SERLSSAAKLKEEELELKNEEEKEAKLLLELSEQEEDLLKEEKKEELKIVEELEESLETK 443
Query: 527 SHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAE 586
+ ++ ++ E + L ++ L+ + L +++ + + E
Sbjct: 444 QGKLTEEKEELEKQALKLLKDKLELKKSEDLLKETKLVKLLEQLELLLLRQKLEEASQKE 503
Query: 587 KERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
+ + +L+ + ++ A + L + + S+ S +
Sbjct: 504 SKAREGLAVLLALIKDGVGLRIISAAGRGGDLGVAVANYKVAISVAVIVEVSAVADEVDE 563
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVD 706
+ L + EL L ++ +++ + Q + D D
Sbjct: 564 RQKLVRALTELPLPARTFVLLDPLLKLPLKSIAVLEIDPALNLAQ---LNKATLEADEDD 620
Query: 707 IDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDL 766
+ K EL +LL+ ++ + +LE L + K + +K L
Sbjct: 621 KRAKVVEGILKDTELTKLLESAKAKESGLRKGVSLEEGLAEKSE---LKASLSELTKELL 677
Query: 767 EAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISY 826
+ + NEI + I E+ + + + L + + +I+
Sbjct: 678 AEQELQEKAESELAKNEILRRQEEIKKKEQRIKEELKKLKLEKEELLADKVQEAQDKINE 737
Query: 827 NENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQ 886
+ K ++ +E LK E + +S +K+++ ++ + ++
Sbjct: 738 ELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSELSLKEKELAE----EEEKTEKLKVEEEK 793
Query: 887 NLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLT 946
+ QE L + + E + E +++ + E E KL
Sbjct: 794 EEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLA 853
Query: 947 DFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDE 1006
+ + + EL L + E K +E + E++ K E
Sbjct: 854 EEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEK---------EKEEKKELE 904
Query: 1007 YKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQI 1066
+ + L + EI + + + ++ + ++L E E + + E
Sbjct: 905 EESQKDNLLEEKENEIEERIAEEAIILLKYESEPEELLLEEADEKEKEEDNKEEEEERNK 964
Query: 1067 QARLEAE 1073
+ L E
Sbjct: 965 RLLLAKE 971
Score = 45.0 bits (106), Expect = 5e-04
Identities = 101/812 (12%), Positives = 260/812 (32%), Gaps = 8/812 (0%)
Query: 585 AEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDD 644
+KERL + + + E +++ K E+ + LE + +LE ++ +
Sbjct: 171 KKKERLKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENLLYL 230
Query: 645 SIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDS 704
K I L L + + + ++ E + + ++ ++ ++ ++ + Q +
Sbjct: 231 DYLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELK 290
Query: 705 VDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKN 764
+ + + R +D++ L + E + LE +L ++ L + +
Sbjct: 291 LLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEI 350
Query: 765 DLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE--- 821
EA+ E + + + ++ + + L + E L+ K +E E
Sbjct: 351 KREAEEEEEEQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEKEAKL 410
Query: 822 -KEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIE 880
E+S E K ++L + ++ Q + T+ ++ + D + +
Sbjct: 411 LLELSEQEEDLLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQALKLLKDKLELKK 470
Query: 881 NQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELEST 940
++ L + + VK L + L+ + + + + L++++ K I +
Sbjct: 471 SEDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGLRIISAAG 530
Query: 941 LDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEED 1000
L ++ + + + + + L + +
Sbjct: 531 RGGDLGVAVANYKVAISVAVIVEVSAVADEVDERQKLVRALTELPLPARTFVLLDPLLKL 590
Query: 1001 RKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKV 1060
+ L+ + + V+ + +E+ +
Sbjct: 591 PLKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGILKDTELTKLLESAKAKESGLR 650
Query: 1061 YELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITH--AALVEQELGEMKNQ 1118
+ + E + K + E + E + +
Sbjct: 651 KGVSLEEGLAEKSELKASLSELTKELLAEQELQEKAESELAKNEILRRQEEIKKKEQRIK 710
Query: 1119 MQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTL 1178
+ + + ++ + A + + EL+ L+ + + L+K E K L
Sbjct: 711 EELKKLKLEKEELLADKVQEAQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSEL 770
Query: 1179 EAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKE 1238
+ KELA+ E + +++++ E ++ +E R + + ++
Sbjct: 771 SLKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEK 830
Query: 1239 KDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQ 1298
E L E K++ E A E E+ ++E L+ E ++K K
Sbjct: 831 IKEEELEELAL-ELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDEL 889
Query: 1299 ELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYL 1358
E E K+ + D ++ E++ +L+ +E + +
Sbjct: 890 ESKEEKEK-EEKKELEEESQKDNLLEEKENEIEERIAEEAIILLKYESEPEELLLEEADE 948
Query: 1359 EQYNLQLSKSQESSTTLTLLQSELAEQRTLNQ 1390
++ + +E LL E L
Sbjct: 949 KEKEEDNKEEEEERNKRLLLAKEELGNVNLMA 980
>gnl|CDD|227512 COG5185, HEC1, Protein involved in chromosome segregation,
interacts with SMC proteins [Cell division and
chromosome partitioning].
Length = 622
Score = 55.4 bits (133), Expect = 3e-07
Identities = 73/377 (19%), Positives = 155/377 (41%), Gaps = 23/377 (6%)
Query: 597 LSQENIELKKKLEQAVEKQ-KGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQ 655
L +++L+ EK + +I L+ L E+++ ++ I+ TLR + +
Sbjct: 247 LEDNYEPSEQELKLGFEKFVHIINTDIANLKTQNDNLYEKIQEAMKISQKIK-TLREKWR 305
Query: 656 ELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQ 715
L + E VN + + Q GK E+LK + E E+ + ++ ++
Sbjct: 306 ALKSDSNKYENYVNAMKQKSQEWPGKLEKLKSEIELKEEEIKALQSNID-ELHKQLRKQG 364
Query: 716 SKKEELCRLLDEK----NTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKIS 771
E+ + E+ LD I ++ + L + + Q +L ++ ++ I
Sbjct: 365 ISTEQFELMNQEREKLTRELDKINIQSDKLTKSVKSRKLEAQGIFKSLEKTLRQYDSLIQ 424
Query: 772 ELNNAQHNKNNEINDLNKRISLFEENNAFL------QRSILDLERNLDEKLKEFNEKEIS 825
+ ++ + +ND + +I++ + ++SIL+L + E++K K I+
Sbjct: 425 NITRSRSQIGHNVNDSSLKINIEQLFPKGSGINESIKKSILELNDEIQERIKTEENKSIT 484
Query: 826 YNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLK 885
E+I+ H I +LTQ + L+ EL +L K+E A + +E +
Sbjct: 485 LEEDIKNLKHDINELTQILEKLELELSEANSKFELSKEENERELVAQRIEIEKLEKELND 544
Query: 886 QNLESVK---------QENTLVVENLQNLIAQKDYEINAKVTE-LSIIMEKCKQYEDKCI 935
NL S Q + ++ L+ + +K Y+I+ +V + I + +
Sbjct: 545 LNLLSKTSILDAEQLVQSTEIKLDELKVDLNRKRYKIHKQVIHVIDITSKFKINIQSSLE 604
Query: 936 ELESTLDAKLTDFSTKE 952
+LE+ L + + E
Sbjct: 605 DLENELGKVIEELRNLE 621
Score = 40.0 bits (93), Expect = 0.013
Identities = 56/374 (14%), Positives = 139/374 (37%), Gaps = 46/374 (12%)
Query: 50 LQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVS 109
L++ Y+ +Q+ + + N +E + ++KI+ L E+
Sbjct: 247 LEDNYEPSEQELKLGFEKFVHIINTDIA-NLKTQNDNLYEKIQEAMKISQKIKTLREKWR 305
Query: 110 QLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKD 169
LK+ N+ + + ++ K Q+ + + ++E K +EE+++L+
Sbjct: 306 ALKSDSNKYENYVNAMKQKSQEWPGKLEKLKSEIELK--------------EEEIKALQS 351
Query: 170 KLRDL-----DENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGN 224
+ +L + ++ E + N+ K ++K+ + + + K+++ ++ E +
Sbjct: 352 NIDELHKQLRKQGISTEQFELMNQERE-KLTRELDKINIQSDKLTKSVKSRKLEAQG--- 407
Query: 225 NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQD 284
+ + LEK + ++ +IQN +++ ++ + E
Sbjct: 408 ---------IFKSLEKTL---RQYDSLIQNITRSRSQIGHNVNDSSLKINIEQLFPKGSG 455
Query: 285 AMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGN----EQDIEALKKENEEIKEKL 340
+ ++ L + QE +N + + + DI L + E+++ +L
Sbjct: 456 -----INESIKKSILELNDEIQERIKTEENKSITLEEDIKNLKHDINELTQILEKLELEL 510
Query: 341 AKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSE 400
++ S K +E E+E E ND + +Q + K+ E
Sbjct: 511 SEANSKFELSKEENERELVA-QRIEIEKLEKELNDLNLLSKTSILDAEQLVQSTEIKLDE 569
Query: 401 LQTQLLSVEEALKK 414
L+ L + K
Sbjct: 570 LKVDLNRKRYKIHK 583
Score = 38.0 bits (88), Expect = 0.046
Identities = 52/308 (16%), Positives = 105/308 (34%), Gaps = 28/308 (9%)
Query: 682 YEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENL 741
+ +L++ YE ++ + K I+T I NL+++ + L + E +
Sbjct: 244 FLKLEDNYEPSEQELKLGFEKFVHIINTDIANLKTQNDNLYEKIQEAMKISQKIKT---- 299
Query: 742 EIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFL 801
L + N N ++ K E +EI + I + N L
Sbjct: 300 ---LREKWRALKSDSNKYENYVNAMKQKSQEWPGKLEKLKSEIELKEEEIKALQSNIDEL 356
Query: 802 QRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLV 861
L + E+ + N++ ++ N + +LT+ + K E +S +
Sbjct: 357 -HKQLRKQGISTEQFELMNQEREKLTRELDKINIQSDKLTKSVKSRKLEAQGIFKSLEKT 415
Query: 862 KQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVEN-----LQNLIAQKDYEINAK 916
++ L NI Q+ N+ + + + I + E+N +
Sbjct: 416 LRQYDSLI-----QNITRSRSQIGHNVNDSSLKINIEQLFPKGSGINESIKKSILELNDE 470
Query: 917 VTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISI 976
+ E K E+K I LE + D + Q+ + +L L ++
Sbjct: 471 IQER------IKTEENKSITLEEDIKNLKHDINELTQILE----KLELELSEANSKFELS 520
Query: 977 KQMNEELQ 984
K+ NE
Sbjct: 521 KEENEREL 528
Score = 33.4 bits (76), Expect = 1.2
Identities = 50/342 (14%), Positives = 134/342 (39%), Gaps = 40/342 (11%)
Query: 387 LQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEF 446
+ Q+ K L EK L++ E + + ++W +L L+++
Sbjct: 293 ISQKIKTLREKWRALKSDSNKYENYVNAMKQKSQEW----------PGKLEKLKSEIELK 342
Query: 447 EKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQK 506
E+ I L+S + L + L + ++ N+ + +L+ + +S L + + +K
Sbjct: 343 EEEIKALQSNIDELHKQLRKQGISTEQFELMNQEREKLTRELDKINIQSDKLTKSVKSRK 402
Query: 507 VIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNY 566
+ + LE + ++ +S I+ ++R + V L I
Sbjct: 403 LEAQGIFKSLE--------------KTLRQYDSLIQNITRSRSQIGHNVNDSSLKIN--- 445
Query: 567 VQESDPMNNSLDNTAQLTAEKER--LDEEVTVLSQENIELKKKLE-------QAVEKQKG 617
+++ P + ++ + + + + + E + ++I L++ ++ + + +
Sbjct: 446 IEQLFPKGSGINESIKKSILELNDEIQERIKTEENKSITLEEDIKNLKHDINELTQILEK 505
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQEL----HAKLINVEALVNQAQV 673
LE E+ + + +E+ E + + L E+ +L +++ E LV ++
Sbjct: 506 LELELSEANSKFELSKEENERELVAQRIEIEKLEKELNDLNLLSKTSILDAEQLVQSTEI 565
Query: 674 EKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQ 715
+ L + K + + T K ++I + +++L+
Sbjct: 566 KLDELKVDLNRKRYKIHKQVIHVIDITSKFKINIQSSLEDLE 607
>gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584). This
protein is found in bacteria and eukaryotes. Proteins in
this family are typically between 943 to 1234 amino
acids in length. This family contains a P-loop motif
suggesting it is a nucleotide binding protein. It may be
involved in replication.
Length = 1198
Score = 54.7 bits (132), Expect = 5e-07
Identities = 116/664 (17%), Positives = 237/664 (35%), Gaps = 130/664 (19%)
Query: 95 EDYNEKIRALNEEVSQLKTKENELHSRIEELED-----------KLQQKIDDEKSVSYQL 143
+ E LN+E+S K S +E LED +LQ +D S+ +L
Sbjct: 302 DQLKEARDELNQELSAANAKLAADRSELELLEDQKGAFEDADIEQLQADLDQLPSIRSEL 361
Query: 144 EEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKA 203
EE + LT ++ +Q + + LK K+ + D++K NE A ++E ++ KA
Sbjct: 362 EEVEARLDALTGKHQDVQRKYERLKQKI----KEQLERDLEKNNERLAAIREE-KDRQKA 416
Query: 204 ELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLE 263
+E +AL + + E + E+ EL + + +
Sbjct: 417 AIEEDLQALESQLRQQLE--------------AGKLEFNEEEYELELRLGRLKQRLDSAT 462
Query: 264 ADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNE 323
A EE E + + L+ E E + EQ +
Sbjct: 463 ATP----EELEQ-------LEINDEALEKAQEEQEQAEANVEQL---------------Q 496
Query: 324 QDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDS--WGGDN 381
++ L+K +E E L + E L +L+ + L+ QL + L + N++ W
Sbjct: 497 SELRQLRKRRDEALEALQRAERRLLQLRQALDELELQLSPQAGSLLHFLRNEAPGWEESI 556
Query: 382 DKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRA 441
K+ + E L++ + D + EG D T L+ R
Sbjct: 557 GKVIS----------------------PELLERTDLDPQ-LVEGSDSDTLYGVSLDLQRL 593
Query: 442 KCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQK 501
++ EL+ + + ++AL + + E+ +
Sbjct: 594 DVPDYAANETELRERLQQAEEALQSAVAKQKQ-----------------AEEQLVQANAE 636
Query: 502 LSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLV 561
L EQK ++ +T L+ A+ ++Q ++ ++ + T++ QL
Sbjct: 637 LEEQKRAEAEARTALKQARLDLQRLQ---NEQQSLKDKLELAIAERKQQAETQLRQLDAQ 693
Query: 562 IENNYVQESDPMNNSLDNTAQLTAEK-ERLDEEVTVLSQENIELKKKLEQAVEKQKGLEE 620
++ Q+ + D+ +L E+ + L + +L + +
Sbjct: 694 LKQLLEQQQAFLEALKDDFRELRTERLAKWQVVEGELDNQLAQLSA---AIEAARTQAKA 750
Query: 621 EIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVE--------------- 665
+++L++ +L S D VD + K L+ +I+EL + +
Sbjct: 751 RLKELKKQ---YDRELASLD-VDPNTVKELKRQIEELETTIERIAVRRPEVREYRAFMQE 806
Query: 666 --ALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCR 723
+ + E+ L + EL+ E++ + + + D K L+ +++ L +
Sbjct: 807 TWLHRDSLREERPNLAIQLRELESSAEEL----QQELTRLIKDTKLRRKKLEQERKALEK 862
Query: 724 LLDE 727
LD+
Sbjct: 863 QLDQ 866
Score = 43.1 bits (102), Expect = 0.002
Identities = 111/640 (17%), Positives = 223/640 (34%), Gaps = 95/640 (14%)
Query: 641 QVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQT 700
Q D +L +Q LH +L A + E++ L+++ + ++ +
Sbjct: 252 QEDFEQLLSLELRLQHLHGEL---VADEERLAEEQEERQEAKNRLRQQLRTLEDQLKEAR 308
Query: 701 GKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEK---------------ENLEIQL 745
+ + ++ L + + EL L D+K ++ +E+ E +E +L
Sbjct: 309 DELNQELSAANAKLAADRSELELLEDQKGAFEDADIEQLQADLDQLPSIRSELEEVEARL 368
Query: 746 DNLNTNYQD---KINTLIQS-KNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFL 801
D L +QD K L Q K LE + + N E + I L
Sbjct: 369 DALTGKHQDVQRKYERLKQKIKEQLERDLEKNNERLAAIREEKDRQKAAI------EEDL 422
Query: 802 QRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAE----- 856
Q L + L+ EFNE+E + ++ T + L+ +
Sbjct: 423 QALESQLRQQLEAGKLEFNEEEYELELRLGRLKQRLDSATATPEELEQLEINDEALEKAQ 482
Query: 857 -----STQLVKQEQALLAAAPVDDN--------IVIENQQLKQNLESVKQENTLVVENLQ 903
+ V+Q Q+ L + QL+Q L+ ++ + + +L
Sbjct: 483 EEQEQAEANVEQLQSELRQLRKRRDEALEALQRAERRLLQLRQALDELELQLSPQAGSLL 542
Query: 904 NLIAQKDYE--------INAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLN 955
+ + + I+ ++ E + + + + D +LD + D
Sbjct: 543 HFLRNEAPGWEESIGKVISPELLERTDLDPQLVEGSDSDTLYGVSLDLQRLDVPDYAANE 602
Query: 956 KNKMAELSAMLESVQAENISIKQMNEELQALTETL----------KQTSNTHEEDRKILD 1005
L E++Q+ KQ E+L L + D + L
Sbjct: 603 TELRERLQQAEEALQSAVAKQKQAEEQLVQANAELEEQKRAEAEARTALKQARLDLQRLQ 662
Query: 1006 EYKQRVQ-ELDAKLAEEIASKTSIIQTLEIQVKELQDKLRS--------YTHVENELGQY 1056
+Q ++ +L+ +AE + ++ L+ Q+K+L ++ ++ + + E
Sbjct: 663 NEQQSLKDKLELAIAERKQQAETQLRQLDAQLKQLLEQQQAFLEALKDDFRELRTERLAK 722
Query: 1057 RSKVYE-----LEQIQARLEAERTQWIHEFE--------------VKTNTLSDLQTQLDT 1097
V L Q+ A +EA RTQ + V NT+ +L+ Q++
Sbjct: 723 WQVVEGELDNQLAQLSAAIEAARTQAKARLKELKKQYDRELASLDVDPNTVKELKRQIEE 782
Query: 1098 YNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVM 1157
I A+ E+ E + MQ + L ++ +I L++ + LQ + +
Sbjct: 783 LETTIERIAVRRPEVREYRAFMQETWLHRDSLREERPNLAIQLRELESSAEELQQELTRL 842
Query: 1158 KSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQI 1197
D L + L + + LE QL +L + +
Sbjct: 843 IKD---TKLRRKKLEQERKALEKQLDQLDELLRGLRDEMR 879
Score = 41.2 bits (97), Expect = 0.007
Identities = 116/580 (20%), Positives = 221/580 (38%), Gaps = 74/580 (12%)
Query: 50 LQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVS 109
+Q +Y+ LKQK E + R N + R E ++AL S
Sbjct: 378 VQRKYERLKQKIKEQLERDLEKNNERLAAIREEKDR-------QKAAIEEDLQALE---S 427
Query: 110 QLKTKENELHSRIEELEDKLQQKIDDEK----SVSYQLEEKAIEISQLTEHNRFLQEEMQ 165
QL+ + E E +L+ ++ K S + EE ++ E QEE +
Sbjct: 428 QLRQQLEAGKLEFNEEEYELELRLGRLKQRLDSATATPEELE-QLEINDEALEKAQEEQE 486
Query: 166 SLKDKLRDLDENVTVEDIKKANESAIAKKDEV-IEKLKAELESVEKALREKESEVEEWGN 224
+ + L + ++ ++ E + +L+ L+ +E L + + +
Sbjct: 487 QAEANVEQLQSELRQLRKRRDEALEALQRAERRLLQLRQALDELELQLSPQAGSLLHFLR 546
Query: 225 NDAWGASDD-----VKEELE--------------------KLVVEKQELIEVIQNHETLI 259
N+A G + E LE L +++ ++ + N L
Sbjct: 547 NEAPGWEESIGKVISPELLERTDLDPQLVEGSDSDTLYGVSLDLQRLDVPDYAANETELR 606
Query: 260 AKL----EADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDND 315
+L EA + V ++K+AE + +A ++E K +LKQ +L+
Sbjct: 607 ERLQQAEEALQSAVAKQKQAEEQLV-QANAELEEQKRAEAEARTALKQARLDLQRLQ--- 662
Query: 316 NWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNND 375
NEQ K E I E+ + E+ L +L ++ KQLLE++ E +D
Sbjct: 663 ------NEQQSLKDKLE-LAIAERKQQAETQLRQL----DAQLKQLLEQQQAFLEALKDD 711
Query: 376 SWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTE 435
++LA Q L+ ++++L + + K + +L+ E
Sbjct: 712 FRELRTERLAKWQVVEGELDNQLAQLSAAIEAARTQAKARLKELKKQ---------YDRE 762
Query: 436 LNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREES 495
L +L T+ ELK Q E L+ + E + + + ++LREE
Sbjct: 763 LASLDVD----PNTVKELKRQIEELETTIERIAVRRPEVREYRAFMQETWLHRDSLREER 818
Query: 496 GLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRV 555
L +L E + +L+ +L + T ++Q+ + E +++ L GLR +
Sbjct: 819 PNLAIQLRELESSAEELQQELTRLIKDTKLRRKKLEQERKALEKQLDQLDELLRGLRDEM 878
Query: 556 EQLGLVIE-NNYVQESDPMNNSLDNTAQLTAEKERLDEEV 594
QL + E N Q ++ LD + +++RL ++
Sbjct: 879 RQLAELKEPANANQAEGSISERLDQLEEFKRKRKRLSGDL 918
Score = 37.7 bits (88), Expect = 0.065
Identities = 115/729 (15%), Positives = 251/729 (34%), Gaps = 87/729 (11%)
Query: 1063 LEQIQA--RLEAER---TQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKN 1117
+ IQA ++ + +FE + LQ A A ++E E KN
Sbjct: 232 IADIQALRAIQKVAPEIEKLQEDFEQLLSLELRLQHLHGELVADEERLAEEQEERQEAKN 291
Query: 1118 QMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKL- 1176
+ L + + L Q++E A + L EL + + +S+ L +K + +
Sbjct: 292 R---LRQQLRTLEDQLKE---ARDELNQELSAANAKLAADRSELELLEDQKGAFEDADIE 345
Query: 1177 TLEAQLKELADNETQYKQMQIVY---EDTQRKLNEELARRDATIATLNTTGAPDLNASIE 1233
L+A L +L ++ ++++ + + + R I N +
Sbjct: 346 QLQADLDQLPSIRSELEEVEARLDALTGKHQDVQRKYERLKQKIKEQLERDLEKNNERLA 405
Query: 1234 NILKEKDATLSEMLKKSEAKDKTL-QEMQAALEKHLSEKYQFEKEA--LELRTEDLEYKL 1290
I +EKD + + + +A + L Q+++A + E+Y+ E L+ R +
Sbjct: 406 AIREEKDRQKAAIEEDLQALESQLRQQLEAGKLEFNEEEYELELRLGRLKQRLDSATATP 465
Query: 1291 QEKEKMIQ---ELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATE 1347
+E E++ L + ++ ++ S+ +++ R+ L L +
Sbjct: 466 EELEQLEINDEALEKAQEEQEQAEANVEQLQSELRQLRKRRDEALEALQRAERRLLQLRQ 525
Query: 1348 IDNMKETITYLEQYNLQLSKSQE----SSTTLTLLQSELAEQRTLNQQLVQIVNTKHTES 1403
+ E + +L E + ++ EL E+ L+ QLV+ ++
Sbjct: 526 ALDELELQLSPQAGSLLHFLRNEAPGWEESIGKVISPELLERTDLDPQLVEGSDSDTLYG 585
Query: 1404 NNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQ 1463
+ + L + + E L ++L+ E L + + + +EQL A
Sbjct: 586 VSLDLQRLDVPDYAANE-----------TELRERLQQAEEALQSAVAKQKQAEEQLVQAN 634
Query: 1464 SQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVE----TSRERNELALRLQNLQEEK 1519
++LEE + + +R Q + + + + +L+ L +
Sbjct: 635 AELEEQKRAEAEARTALKQARLDLQRLQNEQQSLKDKLELAIAERKQQAETQLRQLDAQL 694
Query: 1520 TMLLTEINDLRLNQNTLYNENERLKQ-HLLKTEEDNTSELVKAEQTIQDLHVKLREAEER 1578
LL + + E + E + ++L + I+ +A+ R
Sbjct: 695 KQLLEQQQAFLEALKDDFRELRTERLAKWQVVEGELDNQLAQLSAAIEAART---QAKAR 751
Query: 1579 VKSSATAYT----------SASVRSNQQVEALTS------------------------QV 1604
+K Y + +Q+E L +
Sbjct: 752 LKELKKQYDRELASLDVDPNTVKELKRQIEELETTIERIAVRRPEVREYRAFMQETWLHR 811
Query: 1605 KSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNS 1664
SL E++ L +L + E ++ Q LT L + + + + E ++LE +L+
Sbjct: 812 DSLREERPNLAIQLRELESSAEELQQELTRLIKDTKLRRKKLEQE-RKALEKQLDQLDEL 870
Query: 1665 YAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKE 1724
+ + ++ L+ + S + RL ++E K +L +L K
Sbjct: 871 LRGLRDEMRQLAELKEPANANQAEGSISERLDQ--------LEEFKRKRKRLSGDLKKFL 922
Query: 1725 AKLKEVNNG 1733
+ V
Sbjct: 923 ERFDGVIKD 931
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional.
Length = 2084
Score = 54.0 bits (129), Expect = 9e-07
Identities = 130/730 (17%), Positives = 284/730 (38%), Gaps = 46/730 (6%)
Query: 136 EKSVSYQLEEKAIEISQLTEHNRFLQ----EEMQSLKDKLRDLDENVTVEDIKKANESAI 191
E + + E KA E + + + EE + ++ + +E E+I+K E+ +
Sbjct: 1203 EAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
Query: 192 AKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVK--EELEKLVVEKQELI 249
A +KAE E ++ + EE D +++ K +E +K E ++
Sbjct: 1263 AHFARRQAAIKAE----EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAD 1318
Query: 250 EVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
E + E K +A + +E K+A + K E +A E ++ E EA+ K+KE+ +
Sbjct: 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378
Query: 310 GWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEM--E 367
+ ++ + KK+ EE K+K A + A K ++ +K+ EK+ E
Sbjct: 1379 KADAAKK--KAEEKKKADEAKKKAEEDKKK-ADELKKAAAAKKKADEAKKKAEEKKKADE 1435
Query: 368 LEEWGNNDSWGGDNDKLATLQQENKVLNEKVSEL-QTQLLSVEEALKKKENDLEDWGEGD 426
++ + K A ++ + +K E + + KK ++ + E
Sbjct: 1436 AKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA 1495
Query: 427 DWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSS 486
+ + + K E +K E K +E K K +E + + + +
Sbjct: 1496 KKKADEAKKAAEAKKKADEAKKA-EEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKA 1554
Query: 487 DLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSR 546
+ EE + ++ L+ EA + + + ++++ + E +
Sbjct: 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKK 1614
Query: 547 ENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKK 606
E + + E+ +++++ ++ + AE+++ EE+ +EN
Sbjct: 1615 AEEA-KIKAEE---------LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAA 1664
Query: 607 KLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQEL--------- 657
+ + E+ K EE ++ EED E L+ + + E+ + E +E
Sbjct: 1665 EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA 1724
Query: 658 -HAKLINVEALVNQAQVEKQALD--GKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNL 714
I E +A+ +K+ + K EE K+K + ++ E + + + + +I+
Sbjct: 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
Query: 715 QSKKEELCRLLDEKNTLD------NIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEA 768
+++E R+ +K D NI + + +++ I + SKN
Sbjct: 1785 LDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLE 1844
Query: 769 KISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILD-LERNLDEKLKEFNEKEISYN 827
+ + NKNNE + + + F + + + E + EK+ + + + N
Sbjct: 1845 EADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIPN 1904
Query: 828 ENIEASNHKI 837
N+ N+ I
Sbjct: 1905 NNMAGKNNDI 1914
Score = 41.7 bits (97), Expect = 0.005
Identities = 126/716 (17%), Positives = 279/716 (38%), Gaps = 31/716 (4%)
Query: 63 EVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRI 122
E V + + + E RN E+ E + + ++ + +
Sbjct: 1227 EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKA 1286
Query: 123 EELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVED 182
EE + + K +EK + + ++KA E + E + +E + + +E +
Sbjct: 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346
Query: 183 IKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLV 242
KA A A + E E+ KAE +K +K+++ + + A +E +K
Sbjct: 1347 AAKAEAEAAADEAEAAEE-KAEAAEKKKEEAKKKADAAKKKAEEKKKA-----DEAKKKA 1400
Query: 243 VEKQELIEVIQNHETLIAKLEADLTRVKEEKEA-EVSGKLEQDAMVKELKSKVETLEASL 301
E ++ + ++ K + + +E+K+A E K E+ E K K E + +
Sbjct: 1401 EEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAE 1460
Query: 302 KQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQL 361
+ K++ E ++ + + + KK+ EE K+K A + A+ K ++ +K
Sbjct: 1461 EAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKK-ADEAKKAAEAKKKADEAKKAE 1519
Query: 362 LEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLED 421
K+ + + + K ++ +++ + + + EEA K +E+
Sbjct: 1520 EAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMA 1579
Query: 422 WGEGDDWGTGNSTELNNLRAKCSEFEKTIVE--LKSQEELLKQALIDKENEL-SEWGQTN 478
+ ++ + + E +K E K++E +K + K E + Q
Sbjct: 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLK 1639
Query: 479 EWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRE 538
+ + L++ + K +E+ + K + E A++ + ++ E
Sbjct: 1640 KKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
Query: 539 S--RIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTV 596
+ E L ++ + + E+L E N ++ + + ++ + K+ +E+ +
Sbjct: 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI 1759
Query: 597 LSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQL--ESKDQVDDSIEKTLRNEI 654
+ E KK E EK+ +EEE+ + +E + ++ + D + IE +
Sbjct: 1760 AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNL 1819
Query: 655 QELHAKLINVEALVNQAQVEKQALDGKYEELKE--KYEQMSEKFENQTGKDSVDIDTLIK 712
+K + A+ K+ D K +L+E +E+ N+ G+D K
Sbjct: 1820 VINDSKEMEDSAI-------KEVADSKNMQLEEADAFEKHKFNKNNENGEDGN------K 1866
Query: 713 NLQSKKEELCRLLDEKNTLDNIKVEK-ENLEIQLDNLNTNYQDKINTLIQSKNDLE 767
KE+ + DE+ + ++EK + +I+ + N N K N +I K D +
Sbjct: 1867 EADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIPNNNMAGKNNDIIDDKLDKD 1922
Score = 32.0 bits (72), Expect = 3.8
Identities = 103/621 (16%), Positives = 233/621 (37%), Gaps = 50/621 (8%)
Query: 126 EDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQ----EEMQSLKDKLRDLDENVTVE 181
+ K D+ + + E ++ TE + + EE + + R +E E
Sbjct: 1078 DFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE 1137
Query: 182 DIKKANES---------------------AIAKKDEVIEKLKAELESVEKALREKESEVE 220
D +KA E+ A+K E +K +A ++ E E+ + E
Sbjct: 1138 DARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAE 1197
Query: 221 EWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGK 280
+ +A +++ ++ E E + E ++ E K + + +EE+ E K
Sbjct: 1198 DARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEE-AKKDAEEAKKAEEERNNEEIRK 1256
Query: 281 LEQDAMVKELKSKVETLEASLKQKEQEL---EGWTDNDNWGSSGNEQDIEALKKENEEIK 337
E+ M + ++A +K EL E D + ++ + KK+ EE
Sbjct: 1257 FEEARMA-HFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEE-A 1314
Query: 338 EKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEK 397
+K + + + K +++ +K+ E + E D + A + E ++
Sbjct: 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
Query: 398 VSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQE 457
++ + + KKK ++ + E D + + K E +K E K +
Sbjct: 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD 1434
Query: 458 ELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQ--KLSEQKVIISKLKTQ 515
E K+A +E + ++ + + + + EE+ + K +E+ + K +
Sbjct: 1435 EAKKKA---EEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
Query: 516 LEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRT-----RVEQLGLVIENNYVQES 570
E A++ + + + E++ +++ + + + ++ E E
Sbjct: 1492 AEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADEL 1551
Query: 571 DPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQA--------VEKQKGLEEEI 622
+ AE+ + EE ++ E KK E+A E++K ++ E
Sbjct: 1552 KKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEE 1611
Query: 623 QQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKY 682
+ E+ I E+L+ ++ +E+ + E +E K ++ + +++ K
Sbjct: 1612 AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKK-KAEELKKAEEENKIKAAEEAKKA 1670
Query: 683 EELKEKYEQMSEKFENQTGKD 703
EE K+K E+ + E++
Sbjct: 1671 EEDKKKAEEAKKAEEDEKKAA 1691
>gnl|CDD|129694 TIGR00606, rad50, rad50. All proteins in this family for which
functions are known are involvedin recombination,
recombinational repair, and/or non-homologous end
joining.They are components of an exonuclease complex
with MRE11 homologs. This family is distantly related to
the SbcC family of bacterial proteins.This family is
based on the phylogenomic analysis of JA Eisen (1999,
Ph.D. Thesis, Stanford University).
Length = 1311
Score = 52.7 bits (126), Expect = 2e-06
Identities = 163/873 (18%), Positives = 345/873 (39%), Gaps = 69/873 (7%)
Query: 384 LATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKC 443
L +++ + ++++ + QL S E +K EN+L+ N +++ L +
Sbjct: 212 LKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEI 271
Query: 444 SEFEKTIVELKSQEELLKQALID------------KENELSEWGQTNEWGSPSSSDLNTL 491
+ +++ L+ + N + +L L
Sbjct: 272 KALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKL 331
Query: 492 REESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEM--LSRENE 549
+E LL Q+ +E V +L+ Q + Q+ H D +Q +R+E+ R
Sbjct: 332 NKERRLLNQEKTELLVEQGRLQLQADRHQE----HIRARDSLIQSLATRLELDGFERGPF 387
Query: 550 GLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLE 609
R LVIE + D ++ ++E+ DE ++ K E
Sbjct: 388 SERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKE 447
Query: 610 QAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN-EIQELHAKLINVEALV 668
+KQ+ L+ I++L++ LE +D + K R E ++ ++ V
Sbjct: 448 ILEKKQEELKFVIKELQQLEGSSDRILE----LDQELRKAERELSKAEKNSLTETLKKEV 503
Query: 669 NQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEK 728
Q EK LD K +L ++ EQ++ +T + + D + K+ Q +K + R DE
Sbjct: 504 KSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIK-SRHSDEL 562
Query: 729 NTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLN 788
+L K+ LE L + +IN L +++ L +++ NNE+
Sbjct: 563 TSLLGYFPNKKQLEDWLHSK----SKEINQTRDRLAKLNKELASLEQNKNHINNELESKE 618
Query: 789 KRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLK 848
+++S +E+ F D E +L+ +E + A+ Q +TQ TD +
Sbjct: 619 EQLSSYEDK-LFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQ 677
Query: 849 A-------ELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVEN 901
+ +AE + + Q+ L AP + + E + E +
Sbjct: 678 SCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLK---STESELKKKEKRRDEMLGLAPG 734
Query: 902 LQNLIAQKDYEI---NAKVTELSIIMEKCKQYEDKCIELESTLDAK-------LTDFSTK 951
Q++I K+ EI K+ +++ +++ K ++ L T+ + LTD +
Sbjct: 735 RQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIM 794
Query: 952 EQL------NKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILD 1005
E+ + K+A+ +A L+ + +++Q+N+E Q L + E +RK++
Sbjct: 795 ERFQMELKDVERKIAQQAAKLQGSDLD-RTVQQVNQEKQEKQHELDTVVSKIELNRKLIQ 853
Query: 1006 EYKQRVQELDAKLAEEIASKTSIIQTLEIQ---VKELQDKLRSYTHVENELGQYRSKVYE 1062
+ ++++Q L +K E + K I L+ + ++L + + E+ + +
Sbjct: 854 DQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSP 913
Query: 1063 LEQIQARLEAERTQWIHEFEVKTNTLSD-LQTQLDTYNAKITHAALVEQELGEMKN-QMQ 1120
LE + + E+ + I E D + + + +E ++ + K+ ++
Sbjct: 914 LETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLK 973
Query: 1121 TLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMK------SDNASLLLEKNTLMET 1174
E E + Q++E + +++ ++ K DN +L +N L E
Sbjct: 974 QKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEV 1033
Query: 1175 KLTLEAQLKELADNETQYKQMQIVYEDTQRKLN 1207
+ L+ LKE+ + Q QM+ ++ + ++
Sbjct: 1034 EEELKQHLKEM--GQMQVLQMKQEHQKLEENID 1064
Score = 45.8 bits (108), Expect = 2e-04
Identities = 120/734 (16%), Positives = 288/734 (39%), Gaps = 65/734 (8%)
Query: 488 LNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRE 547
+ +R+E L + + +K I+ K + +L+ V +++Q E + +
Sbjct: 428 ADEIRDEKKGLGRTIELKKEILEKKQEELKF-----------VIKELQQLEGSSDRILEL 476
Query: 548 NEGLRTRVEQLGLVIENNYVQESDPMNNSLDNT-AQLTAEKERLDEEVTVLSQENIELKK 606
++ LR +L +N+ + SL N A L + +LD+E+ L+ +
Sbjct: 477 DQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQ 536
Query: 607 KLEQAVEKQKGLEEEIQQLEEDTSILREQL---ESKDQVDDSIEKTLRNEIQELHAKLIN 663
+K E+ + + L L +K Q++D + EI + +L
Sbjct: 537 MEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHS-KSKEINQTRDRLAK 595
Query: 664 VEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDS--VDIDTLIKNLQSKKEEL 721
+ + + K ++ + E +E+ +K + G D++ L + ++ ++
Sbjct: 596 LNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQR 655
Query: 722 CRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKN 781
L QL + N + + Q++ +L+ IS+L +
Sbjct: 656 AMLAGATAVYSQFIT-------QLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
Query: 782 NEINDLNKRISLFEENN------AFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNH 835
+++ + E+ A ++SI+DL ++++ E K N +I+ +
Sbjct: 709 DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDL---KEKEIPELRNKLQKVNRDIQRLKN 765
Query: 836 KIQQLTQETDTLKAEL-VAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQE 894
I++ T+ E A+ T + E+ + V+ I Q L+ +
Sbjct: 766 DIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKI----AQQAAKLQGS--D 819
Query: 895 NTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTD---FSTK 951
V+ + +K +E++ V+++ + + + +++ L+S + ++ T
Sbjct: 820 LDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTN 879
Query: 952 EQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRV 1011
Q + +L + VQ+ IK E+ L L++ EE + ++
Sbjct: 880 LQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKA 939
Query: 1012 QELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLE 1071
Q+ + E++ + ++ +E ++++ +D E EL +++ E E+ Q ++
Sbjct: 940 QDKVNDIKEKVKNIHGYMKDIENKIQDGKD--DYLKQKETELNTVNAQLEECEKHQEKIN 997
Query: 1072 AERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLK 1131
+ + + + LQ L L + +N+++ +E E ++ LK
Sbjct: 998 EDMRLMRQDIDTQKIQERWLQDNL---------------TLRKRENELKEVEEELKQHLK 1042
Query: 1132 QIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQL--KELADNE 1189
++ + + +K E Q L++ ++K ++ L + + + +L + D E
Sbjct: 1043 EMGQMQVLQ--MKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
Query: 1190 TQYKQMQIVYEDTQ 1203
+Y++M IV T+
Sbjct: 1101 EKYREMMIVMRTTE 1114
Score = 43.5 bits (102), Expect = 0.001
Identities = 129/710 (18%), Positives = 271/710 (38%), Gaps = 41/710 (5%)
Query: 93 NVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQ 152
D K R E+ +++ ++ L IE ++ L++K ++ K V +L++ +
Sbjct: 413 LCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDR 472
Query: 153 LTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKAL 212
+ E L +E++ + +L ++N E +KK +S +K ++ KL+ + +E+
Sbjct: 473 ILE----LDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLN 528
Query: 213 REKESEVE-EWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKE 271
+ + E D + +++ + E L+ N + L L + + +
Sbjct: 529 HHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQ 588
Query: 272 EKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDN--DNWGSSGNEQDIEAL 329
++ E + L+ + L+ KE++L + D D GS E D+E L
Sbjct: 589 TRDRLAKLNKE----LASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERL 644
Query: 330 KKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQ 389
K+E EK +KQ + LA QL ++ Q
Sbjct: 645 KEE----IEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF------------Q 688
Query: 390 ENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKT 449
L E +S+LQ++L + LK E++L+ + D G + ++ EK
Sbjct: 689 TEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSI---IDLKEKE 745
Query: 450 IVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVII 509
I EL+++ + + + + +N++ E P + ++ + E K +
Sbjct: 746 IPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVE 805
Query: 510 SKLKTQLEAAQQGTSSHSHP-VDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQ 568
K+ Q Q + V+Q+ Q+++ ++ + + E R ++ I++ +
Sbjct: 806 RKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSK 865
Query: 569 ESDPMNNSL---DNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQL 625
++ + L N + +E+L E T + E+K EQ + LE++ Q+
Sbjct: 866 TNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK 925
Query: 626 EEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEEL 685
EE S + + I++ ++N + ++ + +K+
Sbjct: 926 EELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQ 985
Query: 686 KEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQL 745
E+ E+ EK DIDT + ++ L E + +K +E L+ L
Sbjct: 986 LEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRE----NELKEVEEELKQHL 1041
Query: 746 DNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFE 795
+ Q ++ + Q LE I + K I F+
Sbjct: 1042 KEMG---QMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFK 1088
Score = 42.7 bits (100), Expect = 0.002
Identities = 128/796 (16%), Positives = 312/796 (39%), Gaps = 77/796 (9%)
Query: 981 EELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAE---EIASKTSIIQTLEIQVK 1037
E L+ + +T Q H+ + K L +YK++ E+ ++ ++ S I+++ E ++
Sbjct: 189 ETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELD 248
Query: 1038 ELQDKLRSYTH-------VENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSD 1090
L+++L+ H ++NE+ +S+ ++E+ + LE + + + + N L
Sbjct: 249 PLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYH 308
Query: 1091 LQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQI----------QEESIAS 1140
+ T K ++EL ++ + + L EK ELL + QE A
Sbjct: 309 NHQR--TVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRAR 366
Query: 1141 NFLKNELQSL-------QDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYK 1193
+ L L + + FS + N L+ + E K T +L E +
Sbjct: 367 DSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAK-TAAQLCADLQSKERLKQ 425
Query: 1194 QMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAK 1253
+ D ++ L + + + +L I+ L++ + + +L+ +
Sbjct: 426 EQADEIRDEKKGLGRTIELKKEIL----EKKQEELKFVIKE-LQQLEGSSDRILELDQEL 480
Query: 1254 DKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSK 1313
K +E+ A + L+E + E ++L+ DL+ KL++ ++ +++LN + +
Sbjct: 481 RKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEML 540
Query: 1314 DSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESST 1373
+ +E ++++ +E+ N K+ +L + +++++++
Sbjct: 541 TKDKMDKDEQIRKI------KSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDR-- 592
Query: 1374 TLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVAT 1433
L L ELA + + +K + ++Y ++ + G EE L+ L ++
Sbjct: 593 -LAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEES-DLERLKEEIEK 650
Query: 1434 LEKQLKTTSETLATKERQLAETKEQLS----------LAQSQLEEVTQLMSSNDRPEADG 1483
KQ + A + + + ++ +++L+E + S R D
Sbjct: 651 SSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK 710
Query: 1484 EPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERL 1543
+ E E+ + + R+E+ Q + EI +LR + + +RL
Sbjct: 711 LKSTESEL-------KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRL 763
Query: 1544 KQHLLKTE---------EDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSN 1594
K + + E E++ + ++ ++L++ E ++ A +
Sbjct: 764 KNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAA--KLQGSDLD 821
Query: 1595 QQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSL 1654
+ V+ + + + + + + K+ ++Q Q + +L+ + ++EK +I +L
Sbjct: 822 RTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEK-LQIGTNL 880
Query: 1655 EFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVN 1714
+ Q + E+ LI ++ + L +K + I
Sbjct: 881 QRRQQFEEQLVELSTEVQSLIREIK---DAKEQDSPLETFLEKDQQEKEELISSKETSNK 937
Query: 1715 QLMEELNKKEAKLKEV 1730
+ +++N + K+K +
Sbjct: 938 KAQDKVNDIKEKVKNI 953
Score = 33.9 bits (77), Expect = 1.1
Identities = 147/785 (18%), Positives = 298/785 (37%), Gaps = 74/785 (9%)
Query: 52 NEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEV-SQ 110
+E LKQKFDE+ + T+ +T T + Y ++ + E+ Q
Sbjct: 166 SEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQ 225
Query: 111 LKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQE---EMQSL 167
+ +KE +L S E+ + ++D K+ ++E +I +L + L+ +M+
Sbjct: 226 ITSKEAQLESS-REIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKD 284
Query: 168 KDKLRDLDENV------TVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
+L E V + D+ ++ + +K+ + + ELE + K R E E
Sbjct: 285 NSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTE 344
Query: 222 WGNNDAWGA--SDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSG 279
+D +E + Q L ++ + E ++ K
Sbjct: 345 LLVEQGRLQLQADRHQEHIRARDSLIQSLATRLE-----LDGFERGPFSERQIKNFHTLV 399
Query: 280 KLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEK 339
Q+ K L++ + K+++ + D E E L+K+ EE+K
Sbjct: 400 IERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFV 459
Query: 340 LAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVS 399
+ + + E ++LE + EL + S N TL++E K L + +
Sbjct: 460 IKELQ--------QLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKA 511
Query: 400 ELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEEL 459
+L +L +++ +++ + T T++ L + ++ I ++KS+
Sbjct: 512 DLDRKLRKLDQEMEQLNHH-----------TTTRTQMEMLTKDKMDKDEQIRKIKSRHS- 559
Query: 460 LKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAA 519
L Q +W S ++N R+ L ++L+ + + + +LE+
Sbjct: 560 --DELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESK 617
Query: 520 QQGTSSHSHPVDQ--QVQDRESRIEMLSRENEGLRTRVEQLG--LVIENNYVQESDPMNN 575
++ SS+ + QD ES +E L E E + L + + ++ + N
Sbjct: 618 EEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQ 677
Query: 576 SLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQ 635
S Q + E +E +L+ KL A +K K E E+++ E+ +
Sbjct: 678 SCCPVCQRVFQTEAELQEFIS------DLQSKLRLAPDKLKSTESELKKKEKRRDEMLGL 731
Query: 636 LESKDQVDDSIEKTLR----------NEIQELHAKLINVEALVNQAQVEKQALD------ 679
+ + D EK + +IQ L + E L+ E+++
Sbjct: 732 APGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 791
Query: 680 GKYEELKEKYEQMSEKFENQTGK-DSVDIDTLIKNLQSKKEELCRLLD---EKNTLDNIK 735
E + + + + K Q K D+D ++ + +K+E LD K L+
Sbjct: 792 TIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKL 851
Query: 736 VEKENLEIQLDNLNTN----YQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRI 791
++ + +IQ TN + +I T +Q + E ++ EL+ + EI D ++
Sbjct: 852 IQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQD 911
Query: 792 SLFEE 796
S E
Sbjct: 912 SPLET 916
Score = 32.7 bits (74), Expect = 2.2
Identities = 151/934 (16%), Positives = 336/934 (35%), Gaps = 109/934 (11%)
Query: 562 IENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIE---LKKKLEQAVEKQ-KG 617
I +Y E DP+ N L ++ +LD E+ L + +LE +EK +G
Sbjct: 239 IVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQG 298
Query: 618 LEEEIQQLEED-TSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQ 676
+E++ L + +RE+ +EK L E + L+ + + + Q++
Sbjct: 299 TDEQLNDLYHNHQRTVREKERELVDCQRELEK-LNKERRLLNQEKTELLVEQGRLQLQAD 357
Query: 677 ALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEE-----------LCRLL 725
+ ++ + E + + IKN + E LC L
Sbjct: 358 RHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADL 417
Query: 726 DEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHN------ 779
K L + ++ + + L + K L + + +L+ I EL + +
Sbjct: 418 QSKERLKQEQADE--IRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILE 475
Query: 780 KNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQ 839
+ E+ + +S E+N+ L ++ ++L + + + K ++ +E NH
Sbjct: 476 LDQELRKAERELSKAEKNS--LTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTT 533
Query: 840 LTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVV 899
TQ K ++ + ++ + L + +QL+ L S +E
Sbjct: 534 RTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGY---FPNKKQLEDWLHSKSKEINQTR 590
Query: 900 ENLQNL---IAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNK 956
+ L L +A + N EL E+ YEDK ++ + D + KE++ K
Sbjct: 591 DRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEK 650
Query: 957 NKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDA 1016
+ + + + + + I Q+ +E Q+ ++ T E L E+ +Q
Sbjct: 651 SS-KQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE----LQEFISDLQSKLR 705
Query: 1017 KLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQ 1076
+++ S S ++ E + E+ K E+ +++ +L+
Sbjct: 706 LAPDKLKSTESELKKKEKRRDEMLGL------APGRQSIIDLKEKEIPELRNKLQKVNR- 758
Query: 1077 WIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKN-QMQTLEYEKQELLKQIQE 1135
+ + N + + +T L T + A + ++ M+ QM+ + E++
Sbjct: 759 ---DIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKI------- 808
Query: 1136 ESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQM 1195
A K + L T++ +E + + + +
Sbjct: 809 -----------------AQQAAKLQGSDL----------DRTVQQVNQEKQEKQHELDTV 841
Query: 1196 QIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDK 1255
E ++ + ++ + + N + L + + ++
Sbjct: 842 VSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQ------IGTNLQRRQQFEEQLVELST 895
Query: 1256 TLQEMQAALE---KHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDS 1312
+Q + ++ + S F ++ + + E + K +K ++N++K+ +
Sbjct: 896 EVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKV---KN 952
Query: 1313 KDSVRYSDEEHVQELRELQLMN-ESLQNEVLRSATEIDNMKETITY---LEQYNLQLSKS 1368
E +Q+ ++ L E+ N V E + +E I L + ++ K
Sbjct: 953 IHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKI 1012
Query: 1369 QES----STTLTLLQSELAE-QRTLNQQLVQIVNTKHTESNNYHQEILR-LNGILSEELP 1422
QE + TL ++EL E + L Q L ++ + + HQ++ ++ I +
Sbjct: 1013 QERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVL 1072
Query: 1423 KLKDLGGQVATLEKQLKTTSETLATKERQLAETK 1456
L G+ EK++K + L + + AE K
Sbjct: 1073 AL----GRQKGYEKEIKHFKKELREPQFRDAEEK 1102
Score = 31.2 bits (70), Expect = 6.8
Identities = 45/322 (13%), Positives = 137/322 (42%), Gaps = 26/322 (8%)
Query: 50 LQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVS 109
Q E D+++K + + + + ++T ++ ++ ++ + ++
Sbjct: 797 FQMELKDVERKIAQQAAKLQGSDLDRTVQ----------QVNQEKQEKQHELDTVVSKIE 846
Query: 110 QLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKD 169
+ + +I+ L+ K + ++ + L+ + QL E + +Q ++ +KD
Sbjct: 847 LNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKD 906
Query: 170 -KLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAW 228
K +D +E ++ E I+ K+ +K + ++ +++ ++ +++ N
Sbjct: 907 AKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD 966
Query: 229 GASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVK 288
G D +K++ +L +L E ++ E + + + +K E L+ + ++
Sbjct: 967 GKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQE--RWLQDNLTLR 1024
Query: 289 ELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLA 348
+ +++++ +E LKQ +E+ + + +K+E+++++E + +
Sbjct: 1025 KRENELKEVEEELKQHLKEM-------------GQMQVLQMKQEHQKLEENIDLIKRNHV 1071
Query: 349 KLKTHSESLQKQLLEKEMELEE 370
+ +K++ + EL E
Sbjct: 1072 LALGRQKGYEKEIKHFKKELRE 1093
>gnl|CDD|221952 pfam13166, AAA_13, AAA domain. This family of domains contain a
P-loop motif that is characteristic of the AAA
superfamily. Many of the proteins in this family are
conjugative transfer proteins. This family includes the
PrrC protein that is thought to be the active component
of the anticodon nuclease.
Length = 713
Score = 51.5 bits (124), Expect = 4e-06
Identities = 69/393 (17%), Positives = 133/393 (33%), Gaps = 87/393 (22%)
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLE-----SKDQVDDSIEK 648
V L +ENIE++ ++E+ ++ K LEE+I+QLE + E+LE D+ + K
Sbjct: 83 VFTLGEENIEIEAQIEELKKELKKLEEKIEQLEAEIEKKEEELEKAKNKFLDKAWKKLAK 142
Query: 649 TLRNEIQELH----AKLINVEALVN---QAQVEKQALDGKYEELKEKYEQMSEK------ 695
+ + E K E L+ + +L EELK K + +
Sbjct: 143 KYDSNLSEALKGLNYKKNFKEKLLKELKSVILNASSLLS-LEELKAKIKTLFSSNKPELA 201
Query: 696 -----------FENQ-------TGKDSVDIDTLIKNL----------------------- 714
E G V I LI NL
Sbjct: 202 LLTLSVIDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEYHEEGDTCPFCQ 261
Query: 715 ----QSKKEELCRLLDE--KNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEA 768
+ +K EL DE + ++ ++ + E ++ + I + ++ +
Sbjct: 262 QTITEERKAELEAHFDEEYQELIEQLEELIDKYESHIEKALEELE-SILDTEKENSEFKL 320
Query: 769 KISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNE 828
+ EL + +++ + + + + + ++ N+ + NE
Sbjct: 321 DVEELKALLEALEEILEKNLQKLEE-KLKDPSTSIELES----ITDLIESINDIIDAINE 375
Query: 829 NIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNL 888
I N KI L +E + K +L L+A ++I ++ K L
Sbjct: 376 LIREHNEKIDNLKKEKNKAKKKL------------WLHLVAEL--KEDIDAYQKEKK-GL 420
Query: 889 ESVKQENTLVVENLQNLIAQKDYEINAKVTELS 921
E ++ L+ I + EI +L+
Sbjct: 421 EKAINSLEKEIKQLEAEIKALEKEIKELEKQLT 453
Score = 48.1 bits (115), Expect = 5e-05
Identities = 43/239 (17%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 32 CQTTGSDN-SDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFEL 90
CQ T ++ E+ +D EY +L ++ +E++++ +S + E
Sbjct: 260 CQQTITEERKAELEAHFD---EEYQELIEQLEELIDKYES------------HIEKALEE 304
Query: 91 MPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEI 150
+ ++ D ++ +V +LK L +E+ KL++K+ D + IE+
Sbjct: 305 LESILDTEKENSEFKLDVEELKALLEALEEILEKNLQKLEEKLKDPSTS--------IEL 356
Query: 151 SQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAK-KDEVIEKLKAELESVE 209
+T+ + + + ++ + +R+ +E ++++KK A K ++ +LK ++++ +
Sbjct: 357 ESITDLIESINDIIDAINELIREHNE--KIDNLKKEKNKAKKKLWLHLVAELKEDIDAYQ 414
Query: 210 KALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTR 268
K + E + N ++ E++ L E +EL + + N E ++ L
Sbjct: 415 KEKKGLEKAI-----NSLEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKA 468
Score = 42.3 bits (100), Expect = 0.003
Identities = 60/381 (15%), Positives = 153/381 (40%), Gaps = 36/381 (9%)
Query: 106 EEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQ 165
++ +LK + +L +IE+LE ++ +K ++E + +++ L E ++
Sbjct: 95 AQIEELKKELKKLEEKIEQLEAEI-EKKEEELEKAKNKFLDKAWKKLAKKYDSNLSEALK 153
Query: 166 SLKDKLRDLDENVTVEDIKKANESAIAKKDEVI--EKLKAELESVEKALREKESEVEEWG 223
L K ++ + K +S I ++ E+LKA+++++ + + + + +
Sbjct: 154 GLNYKKNFKEK------LLKELKSVILNASSLLSLEELKAKIKTLFSSNKPELALLTL-- 205
Query: 224 NNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQ 283
+ + + + + ++ I + N+ ++ L +E +
Sbjct: 206 SVIDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEYHEEGDTCPFCQQTIT 265
Query: 284 DAMVKELKS----KVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEK 339
+ EL++ + + L L++ + E + + + I +KEN E K
Sbjct: 266 EERKAELEAHFDEEYQELIEQLEELIDKYESHIEK----ALEELESILDTEKENSEFKLD 321
Query: 340 LAKQESTLAKLKTHSESLQKQLLEK------EMELEEWGNNDSWGGDNDKLATLQQENKV 393
+ + ++ L L+ E ++L EK +ELE D + ++
Sbjct: 322 VEELKALLEALEEILEKNLQKLEEKLKDPSTSIELES---------ITDLIESINDIIDA 372
Query: 394 LNEKVSELQTQLLSVEEALKKKENDLEDWG--EGDDWGTGNSTELNNLRAKCSEFEKTIV 451
+NE + E ++ ++++ K + L E + E L + EK I
Sbjct: 373 INELIREHNEKIDNLKKEKNKAKKKLWLHLVAELKEDIDAYQKEKKGLEKAINSLEKEIK 432
Query: 452 ELKSQEELLKQALIDKENELS 472
+L+++ + L++ + + E +L+
Sbjct: 433 QLEAEIKALEKEIKELEKQLT 453
Score = 41.9 bits (99), Expect = 0.003
Identities = 45/232 (19%), Positives = 99/232 (42%), Gaps = 45/232 (19%)
Query: 195 DEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQN 254
E+IE+L+ ++ E E +EE + D ++E + ++ +EL +++
Sbjct: 281 QELIEQLEELIDKYE---SHIEKALEELES------ILDTEKENSEFKLDVEELKALLEA 331
Query: 255 HETLIAKLEADLTRVKEEKEAEVSGKLEQD---AMVKELKSKVETLEASLKQKEQELEGW 311
E ++ K L EEK + S +E + +++ + ++ + +++
Sbjct: 332 LEEILEKNLQKL----EEKLKDPSTSIELESITDLIESINDIIDAINELIRE-------- 379
Query: 312 TDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEW 371
+ + I+ LKKE + K+KL +A+LK ++ QK+ E +
Sbjct: 380 ----------HNEKIDNLKKEKNKAKKKLWLHL--VAELKEDIDAYQKEKKGLEKAINS- 426
Query: 372 GNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWG 423
++ L+ E K L +++ EL+ QL ++E + L+ +G
Sbjct: 427 --------LEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKAYG 470
Score = 38.1 bits (89), Expect = 0.046
Identities = 84/436 (19%), Positives = 173/436 (39%), Gaps = 57/436 (13%)
Query: 880 ENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIE-LE 938
EN +++ +E +K+E ++ L+ I Q + EI K EL K DK + L
Sbjct: 89 ENIEIEAQIEELKKE----LKKLEEKIEQLEAEIEKKEEELEKAKNKFL---DKAWKKLA 141
Query: 939 STLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHE 998
D+ L++ KN +L L+SV S+ EEL+A +TL ++
Sbjct: 142 KKYDSNLSEALKGLNYKKNFKEKLLKELKSVILNASSLLS-LEELKAKIKTLFSSNKPEL 200
Query: 999 EDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRS 1058
+ V + D EI K SII + ++ + EL + L + V+ L +Y
Sbjct: 201 ALLTLS------VIDFDEIEQAEILEK-SIIGSSDVPISELINNLGNSDWVKEGL-EYHE 252
Query: 1059 KVYELEQIQARLEAERTQWIHEF--EVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMK 1116
+ Q + ER + E + L+ +D Y + I A + + + +
Sbjct: 253 EGDTCPFCQQTITEERKAELEAHFDEEYQELIEQLEELIDKYESHIEKALEELESILDTE 312
Query: 1117 NQMQTLEYEKQELLKQIQEESIASNFLKNEL-QSLQDAFSVMKSDNASLLLEK-NTLMET 1174
+ + + +EL ++ +L + L+D + ++ ++ + L+E N +++
Sbjct: 313 KENSEFKLDVEELKALLEALEEILEKNLQKLEEKLKDPSTSIELESITDLIESINDIIDA 372
Query: 1175 KLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIEN 1234
L + E DN + K K ++L +
Sbjct: 373 INELIREHNEKIDNLKKEKN----------KAKKKLWL---------------------H 401
Query: 1235 ILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKE 1294
++ E + K+ + +K + ++ +++ + E +ALE ++LE +L E
Sbjct: 402 LVAELKEDIDAYQKEKKGLEKAINSLEKEIKQL-----EAEIKALEKEIKELEKQLTNIE 456
Query: 1295 KMIQELNEMKQSFFIG 1310
E+N++ +++ G
Sbjct: 457 PTADEINKLLKAYGFG 472
Score = 35.0 bits (81), Expect = 0.48
Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 27/224 (12%)
Query: 1258 QEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVR 1317
+E +A LE H E+YQ E LE + E + + L E++ I D++
Sbjct: 266 EERKAELEAHFDEEYQELIEQLEELIDKYE------SHIEKALEELE---SILDTEKENS 316
Query: 1318 YSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTL 1377
+ + L+ + E L+ + + ++ + +I L + ++
Sbjct: 317 EFKLDVEELKALLEALEEILEKNLQKLEEKLKDPSTSIE--------LESITDLIESIND 368
Query: 1378 LQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGI------LSEELPKLKDLGGQV 1431
+ + E + + + + N ++ L L+ + + + K L +
Sbjct: 369 IIDAINELIREHNEKID----NLKKEKNKAKKKLWLHLVAELKEDIDAYQKEKKGLEKAI 424
Query: 1432 ATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSS 1475
+LEK++K + E+++ E ++QL+ + +E+ +L+ +
Sbjct: 425 NSLEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKA 468
Score = 34.2 bits (79), Expect = 0.78
Identities = 62/417 (14%), Positives = 162/417 (38%), Gaps = 32/417 (7%)
Query: 746 DNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSI 805
+N + + TL + ++EA+I EL +I L I EE L+++
Sbjct: 73 ENFDEGEIKGVFTLGEENIEIEAQIEELKKELKKLEEKIEQLEAEIEKKEEE---LEKAK 129
Query: 806 LDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQ 865
+KL + + +S E ++ N+K + LK+ ++ + L + +
Sbjct: 130 NKFLDKAWKKLAKKYDSNLS--EALKGLNYKKNFKEKLLKELKSVILNASSLLSLEELKA 187
Query: 866 ALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSII-- 923
+ + + + + ++Q L +++I D I+ + L
Sbjct: 188 KIKTLFSSNKPELALLTLSVIDFDEIEQAEIL----EKSIIGSSDVPISELINNLGNSDW 243
Query: 924 MEKCKQY---EDKCIELESTLDAKLTDFSTKEQLN-------KNKMAELSAMLESVQAEN 973
+++ +Y D C + T+ + K +L + + +L +++ ++
Sbjct: 244 VKEGLEYHEEGDTCPFCQQTITEER-----KAELEAHFDEEYQELIEQLEELIDKYESHI 298
Query: 974 ISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLE 1033
+ E + + + EE + +L+ ++ +++ KL E++ ++ I LE
Sbjct: 299 EKALEELESILDTEKENSEFKLDVEELKALLEALEEILEKNLQKLEEKLKDPSTSI-ELE 357
Query: 1034 IQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQT 1093
++ + + ++ K+ L++ + + + + W+H + Q
Sbjct: 358 SITDLIESINDIIDAINELIREHNEKIDNLKKEKNKAKKK--LWLHLVAELKEDIDAYQK 415
Query: 1094 QLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSL 1150
+ I E+E+ +++ +++ LE E +EL KQ+ ++ + L++
Sbjct: 416 EKKGLEKAINSL---EKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKAY 469
Score = 32.7 bits (75), Expect = 2.6
Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 74/411 (18%)
Query: 282 EQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKE-NEEIKEKL 340
E +A ++ELK +++ LE ++Q E E+E E+++E K + ++ +KL
Sbjct: 92 EIEAQIEELKKELKKLEEKIEQLEAEIEK-----------KEEELEKAKNKFLDKAWKKL 140
Query: 341 AK-QESTLAKLKTHSES----LQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLN 395
AK +S L++ +K L E + + + S K+ TL NK
Sbjct: 141 AKKYDSNLSEALKGLNYKKNFKEKLLKELKSVILNASSLLSLEELKAKIKTLFSSNKPEL 200
Query: 396 EKVSELQTQLLSVE--EALKKK--------------ENDLEDW-GEGDDWGTGNST---- 434
++ +E E L+K DW EG ++ T
Sbjct: 201 ALLTLSVIDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEYHEEGDTCPFC 260
Query: 435 --ELNNLRAKCSE--FEKTIVELKSQ-EELLKQALIDKENELSEWGQTNEWGSPSSSDLN 489
+ R E F++ EL Q EEL+ + E L E S D
Sbjct: 261 QQTITEERKAELEAHFDEEYQELIEQLEELIDKYESHIEKALEEL--------ESILDTE 312
Query: 490 TLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENE 549
E L ++L + L+ LE Q ++++++D + IE+ S
Sbjct: 313 KENSEFKLDVEELKAL---LEALEEILEKNLQK-------LEEKLKDPSTSIELES---- 358
Query: 550 GLRTRVEQLGLVIE--NNYVQESDPM-NNSLDNTAQLTA-----EKERLDEEVTVLSQEN 601
+ +E + +I+ N ++E + +N + L E++ +E
Sbjct: 359 -ITDLIESINDIIDAINELIREHNEKIDNLKKEKNKAKKKLWLHLVAELKEDIDAYQKEK 417
Query: 602 IELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN 652
L+K + ++ K LE EI+ LE++ L +QL + + D I K L+
Sbjct: 418 KGLEKAINSLEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKA 468
Score = 31.1 bits (71), Expect = 6.9
Identities = 32/217 (14%), Positives = 86/217 (39%), Gaps = 28/217 (12%)
Query: 1541 ERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEAL 1600
L+ H + ++ +L E+ I + +A E ++S S VE L
Sbjct: 270 AELEAHFDEEYQELIEQL---EELIDKYESHIEKALEELESILDTEKENS-EFKLDVEEL 325
Query: 1601 TSQVKSLTEQKEKLQEKLYQ-AEDVVQK-----HQASLTNLQIVLEQFQA--EKDNEIAQ 1652
+ +++L E EK +KL + +D + ++ +++ + NE
Sbjct: 326 KALLEALEEILEKNLQKLEEKLKDPSTSIELESITDLIESINDIIDAINELIREHNEKID 385
Query: 1653 SLE----------------FLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLS 1696
+L+ L+ +++ + L + I++L+ ++++ + A +
Sbjct: 386 NLKKEKNKAKKKLWLHLVAELKEDIDAYQKEKKGLEKAINSLEKEIKQLEAEIKALEKEI 445
Query: 1697 DQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNNG 1733
+L ++ I+ +++N+L++ +L++
Sbjct: 446 KELEKQLTNIEPTADEINKLLKAYGFGNFELEKEAED 482
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family. This
family consists of the 116kDa V-type ATPase (vacuolar
(H+)-ATPases) subunits, as well as V-type ATP synthase
subunit i. The V-type ATPases family are proton pumps
that acidify intracellular compartments in eukaryotic
cells for example yeast central vacuoles,
clathrin-coated and synaptic vesicles. They have
important roles in membrane trafficking processes. The
116kDa subunit (subunit a) in the V-type ATPase is part
of the V0 functional domain responsible for proton
transport. The a subunit is a transmembrane glycoprotein
with multiple putative transmembrane helices it has a
hydrophilic amino terminal and a hydrophobic carboxy
terminal. It has roles in proton transport and assembly
of the V-type ATPase complex. This subunit is encoded by
two homologous gene in yeast VPH1 and STV1.
Length = 707
Score = 51.2 bits (123), Expect = 5e-06
Identities = 54/306 (17%), Positives = 115/306 (37%), Gaps = 44/306 (14%)
Query: 60 KFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELH 119
K + + + + P + +L + D +I+ + E + L+ + NEL
Sbjct: 42 KLESKIKKLGIPLKDTGGKPDVPPSKEFLDLEEEILDLEAEIKEVEENLESLEKEINELE 101
Query: 120 SRIEELEDKLQQKIDDEKSV-----SYQLEEKAIEISQLTEHNRFL----QEEMQSLKDK 170
+ L D+ + +D+ + ++ K + ++ + +E++++ + +
Sbjct: 102 EWLNVL-DEEKSFLDENLEELSELSNLDIDFKYLRGAEGLKLGFVAGVINREKLEAFERE 160
Query: 171 L-RDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWG 229
L R + +I++ E + K +L+ V+K L E+ +
Sbjct: 161 LWRACRGYIRQAEIEEPLEDPKKTVFIIFFVGKEDLDKVKKILDSFGFELYD-------- 212
Query: 230 ASDDVKEELEKLVVEKQELIEVIQNH-ETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVK 288
+ + E +L+ + + IE +Q E + LE L ++ +E L D V
Sbjct: 213 -VPETEGERSELISKVNKRIEELQRVLEQTESHLEKVLVKIADE-------LLAWDEQVS 264
Query: 289 ELKSKVETLEASLKQKEQE---LEGWTD-----------NDNWGSSGNEQDIEALKKENE 334
+ K+ ETL +L + + EGW + SG+ IE + NE
Sbjct: 265 KEKAVYETL--NLFNYDTKTLIAEGWVPAKDLEKLKAALENATEGSGSVPSIENDIETNE 322
Query: 335 EIKEKL 340
E L
Sbjct: 323 EPPTYL 328
Score = 42.8 bits (101), Expect = 0.002
Identities = 64/286 (22%), Positives = 108/286 (37%), Gaps = 42/286 (14%)
Query: 101 IRALNEEVSQLKTKENELHSRIEELEDKL---QQKIDDEKSVSYQLEEKAIEISQLTEHN 157
IR LNE+VS + K R +E+E KL + KI K ++ E
Sbjct: 12 IRDLNEDVSAFQRKFVNEVRRCDEVERKLRKLESKIKKLGIPLKDTGGKP-DVPPSKEFL 70
Query: 158 RFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKES 217
L+EE+ L+ ++++++E N ++ K+ +E+ L+ + L E
Sbjct: 71 D-LEEEILDLEAEIKEVEE----------NLESLEKEINELEEWLNVLDEEKSFLDENLE 119
Query: 218 EVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEE--KEA 275
E+ E N D E L+ V VI + E +L R ++A
Sbjct: 120 ELSELSNLDIDFKYLRGAEGLKLGFV-----AGVIN--REKLEAFERELWRACRGYIRQA 172
Query: 276 EVSGKLEQD-AMV-------KELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIE 327
E+ LE V KE KV+ + S + ++ + I
Sbjct: 173 EIEEPLEDPKKTVFIIFFVGKEDLDKVKKILDSFGFELYDVPE-------TEGERSELIS 225
Query: 328 ALKKENEEIKEKLAKQESTLAKLKT--HSESLQ-KQLLEKEMELEE 370
+ K EE++ L + ES L K+ E L + + KE + E
Sbjct: 226 KVNKRIEELQRVLEQTESHLEKVLVKIADELLAWDEQVSKEKAVYE 271
Score = 39.7 bits (93), Expect = 0.017
Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 42/250 (16%)
Query: 783 EINDLNKRISLFEENNAFLQRSILDLER-------------------------------- 810
+I DLN+ +S F+ R ++ER
Sbjct: 11 QIRDLNEDVSAFQRKFVNEVRRCDEVERKLRKLESKIKKLGIPLKDTGGKPDVPPSKEFL 70
Query: 811 -------NLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQ 863
+L+ ++KE E S + I + L +E L L +E + L
Sbjct: 71 DLEEEILDLEAEIKEVEENLESLEKEINELEEWLNVLDEEKSFLDENLEELSELSNLDID 130
Query: 864 EQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSII 923
+ L A + V + LE+ ++E A+ + + + II
Sbjct: 131 FKYLRGAEGLKLGFVAGVINRE-KLEAFERELWRACRGYIR-QAEIEEPLEDPKKTVFII 188
Query: 924 MEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAE-NISIKQMNEE 982
K+ DK ++ + +L D E +++++ +E +Q + + +
Sbjct: 189 FFVGKEDLDKVKKILDSFGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHLEKV 248
Query: 983 LQALTETLKQ 992
L + + L
Sbjct: 249 LVKIADELLA 258
Score = 37.7 bits (88), Expect = 0.067
Identities = 37/197 (18%), Positives = 76/197 (38%), Gaps = 20/197 (10%)
Query: 586 EKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDS 645
E L+EE+ L E E+++ LE LE+EI +LEE ++L E+ D+ +
Sbjct: 68 EFLDLEEEILDLEAEIKEVEENLES-------LEKEINELEEWLNVLDEEKSFLDENLEE 120
Query: 646 IEKTLRNEIQELH------AKLINVEALVNQAQVEK-QALDGKYEELKEKYEQMSEKFEN 698
+ + +I + KL V ++N+ ++E + + + ++ E
Sbjct: 121 LSELSNLDIDFKYLRGAEGLKLGFVAGVINREKLEAFERELWRACRGYIRQAEIEE-PLE 179
Query: 699 QTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDK--- 755
K I + K K +++ D + E E E + +N ++
Sbjct: 180 DPKKTVFIIFFVGKEDLDKVKKILDSF-GFELYDVPETEGERSE-LISKVNKRIEELQRV 237
Query: 756 INTLIQSKNDLEAKISE 772
+ + KI++
Sbjct: 238 LEQTESHLEKVLVKIAD 254
Score = 33.5 bits (77), Expect = 1.4
Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 36/205 (17%)
Query: 1543 LKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTS 1602
LK K + + E + E+ I DL +++E EE S+ + L
Sbjct: 54 LKDTGGKPDVPPSKEFLDLEEEILDLEAEIKEVEE---------NLESLEKE--INELEE 102
Query: 1603 QVKSLTEQKEKLQEKLYQAE-------DVVQKHQASLTNLQIVLEQFQAEKDNEIAQSL- 1654
+ L E+K L E L + D A L V EK + L
Sbjct: 103 WLNVLDEEKSFLDENLEELSELSNLDIDFKYLRGAEGLKLGFVAGVINREKLEAFERELW 162
Query: 1655 EFLQGELNNSYAKNNELTQLIST---------LQHQLQEARESLSA--------AGRLSD 1697
+G + + + + ++++ +S G S+
Sbjct: 163 RACRGYIRQAEIEEPLEDPKKTVFIIFFVGKEDLDKVKKILDSFGFELYDVPETEGERSE 222
Query: 1698 QLNQKSQTIQELTEKVNQLMEELNK 1722
+++ ++ I+EL + Q L K
Sbjct: 223 LISKVNKRIEELQRVLEQTESHLEK 247
Score = 32.4 bits (74), Expect = 2.9
Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 45/273 (16%)
Query: 1109 EQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVM---KSDNASLL 1165
E E+ E++ +++LE E EL + + +FL L+ L + ++ K +
Sbjct: 80 EAEIKEVEENLESLEKEINELEEWLNVLDEEKSFLDENLEELSELSNLDIDFKYLRGAEG 139
Query: 1166 LEKNTLMET--KLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTT 1223
L+ + + LEA +EL Y + Q ++ E L T+ +
Sbjct: 140 LKLGFVAGVINREKLEAFERELWRACRGYIR--------QAEIEEPLEDPKKTVFIIFFV 191
Query: 1224 GAPDLNASIENILKEKDATL----------SEMLKKSEAKDKTLQEMQAALEKHLSEKYQ 1273
G DL+ ++ IL L SE++ K + + LQ + E HL
Sbjct: 192 GKEDLD-KVKKILDSFGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHL----- 245
Query: 1274 FEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVR--YSDEEHVQELRE-L 1330
EK +++ E L + E+ + + E + F D+K + + + +++L+ L
Sbjct: 246 -EKVLVKIADELLAWD--EQVSKEKAVYET-LNLFNYDTKTLIAEGWVPAKDLEKLKAAL 301
Query: 1331 QLMNESLQNEVLRSATEIDNMKETI----TYLE 1359
+ E S I+N ET TYL+
Sbjct: 302 ENATEGSG-----SVPSIENDIETNEEPPTYLK 329
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated.
Length = 646
Score = 49.2 bits (118), Expect = 2e-05
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 93 NVEDYNEKIRALNEEVSQLKTKENELHSRIEELE---------DKLQQ------------ 131
+E ++I+ L EE+S+L+ + EL IE LE L
Sbjct: 94 ELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVP 153
Query: 132 KIDDEKSVSYQLEEKAIEISQLTEHNRF----LQEEMQSLKDKLRDLD-ENVTVEDIKKA 186
+ E+ E IS + L+E ++++L+ L E + +E+
Sbjct: 154 EDKLEELKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGTP 213
Query: 187 NESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQ 246
+E I + E +E+++ E ES+ + L+E + E + E LE + +E+
Sbjct: 214 SE-LIREIKEELEEIEKERESLLEELKELAKKYLEELLA--------LYEYLE-IELERA 263
Query: 247 EL 248
E
Sbjct: 264 EA 265
Score = 47.6 bits (114), Expect = 5e-05
Identities = 57/286 (19%), Positives = 115/286 (40%), Gaps = 72/286 (25%)
Query: 159 FLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESE 218
L+ + + L +L V +ED+K+ +E + KL++ L + +AL
Sbjct: 13 TLKSYKDEVLEALHELGV-VHIEDLKEE------LSNERLRKLRSLLTKLSEAL------ 59
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEV-IQNHETLIAKLEADLTRVKEEKEAEV 277
D ++ L KL ++E +V +++ E LI +E +L E+ E E+
Sbjct: 60 -------------DKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEEL----EKIEKEI 102
Query: 278 SGKLEQDAMVKELKSKVETLEASLKQKEQELEGWT----DNDNWGSSGN---------EQ 324
E+ + EL+++ L+Q+ + LE W D E
Sbjct: 103 KELEEE---ISELENE----IKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPED 155
Query: 325 DIEALKKENEEIKEKLAKQEST-----LAKLKTHSESLQKQLLE---KEMELEEWGNNDS 376
+E LK E++ + + + LK S+ ++++L + + +ELEE G
Sbjct: 156 KLEELKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEG---- 211
Query: 377 WGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDW 422
T + + + E++ E++ + S+ E LK+ +
Sbjct: 212 ---------TPSELIREIKEELEEIEKERESLLEELKELAKKYLEE 248
Score = 44.9 bits (107), Expect = 4e-04
Identities = 45/253 (17%), Positives = 98/253 (38%), Gaps = 48/253 (18%)
Query: 141 YQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKK--DEVI 198
+E+ E+S E R L+ + L + L L + + + + ++ K +E+I
Sbjct: 31 VHIEDLKEELS--NERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELI 88
Query: 199 EKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQEL---------I 249
+ ++ ELE +EK ++E E E+ E ++ E+++L E + L +
Sbjct: 89 KDVEEELEKIEKEIKELEEEISE------------LENEIKELEQEIERLEPWGNFDLDL 136
Query: 250 EVIQNHETLIAKL-------EADLTRVKEEKEAEVSGKLEQDAMV-----KELKSKVETL 297
++ + + + +L + + E + V KEL +VE
Sbjct: 137 SLLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEE 196
Query: 298 EASLKQKEQELEGWTDNDNWGS-----SGNEQDIEALKKENEEIKEKLAKQESTLAKLKT 352
L + EL + G+ ++++E ++KE E + E+L + +
Sbjct: 197 LKKLGFERLEL------EEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELL 250
Query: 353 HSESLQKQLLEKE 365
+ LE+
Sbjct: 251 ALYEYLEIELERA 263
Score = 35.3 bits (82), Expect = 0.33
Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 31/210 (14%)
Query: 447 EKTIVELKSQEELLKQA---LIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLS 503
EK V +KS EEL+K L E E+ E E ++ L E ++L
Sbjct: 75 EKKKVSVKSLEELIKDVEEELEKIEKEIKE--LEEE--------ISELENE----IKELE 120
Query: 504 EQKVIISKLKT-QLEAAQQGTSSHSHP----VDQQVQDRESRIEMLSRENEGLRTRVEQL 558
++ + L+ + + V + + EN + +
Sbjct: 121 QEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKLES--DVENVEYISTDKGY 178
Query: 559 G---LVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEK- 614
+V+ E + L E+ E + + +E E++K+ E +E+
Sbjct: 179 VYVVVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEEL 238
Query: 615 ---QKGLEEEIQQLEEDTSILREQLESKDQ 641
K EE+ L E I E+ E+ +
Sbjct: 239 KELAKKYLEELLALYEYLEIELERAEALSK 268
Score = 35.3 bits (82), Expect = 0.34
Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Query: 85 RNGFELM--PNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQ 142
+ GFE + +E IR + EE+ +++ + L ++EL K +++
Sbjct: 199 KLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEI 258
Query: 143 LEEKAIEISQLTEHNRFLQ-------EEMQSLKDKLRDLDEN---VTVEDIKKANE 188
E+A +S+ + ++ + ++ LK+ + V + + E
Sbjct: 259 ELERAEALSKFLKTDKTFAIEGWVPEDRVKKLKELIDKATGGSAYVEFVEPDEEEE 314
Score = 35.3 bits (82), Expect = 0.37
Identities = 34/249 (13%), Positives = 84/249 (33%), Gaps = 39/249 (15%)
Query: 1503 RERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNEN-----ERLKQHLLKTEEDNTSE 1557
++E+ L L + I DL+ + +L + L K
Sbjct: 16 SYKDEVLEALHELG------VVHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSY---- 65
Query: 1558 LVKAEQTIQDL--HVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQ 1615
+ +++ V ++ EE +K ++++ L ++ L + ++L+
Sbjct: 66 -LPKLNPLREEKKKVSVKSLEELIKDVEEELEKIE----KEIKELEEEISELENEIKELE 120
Query: 1616 EKLYQAE-----DVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNE 1670
+++ + E D+ + + + +D LE +
Sbjct: 121 QEIERLEPWGNFDLDLSLLLGFKYVSVFV--GTVPEDKLEELKLESDVENVEYISTDKGY 178
Query: 1671 LTQLISTLQHQLQEARE----------SLSAAGRLSDQLNQKSQTIQELTEKVNQLMEEL 1720
+ ++ L+ E E L G S+ + + + ++E+ ++ L+EEL
Sbjct: 179 VYVVVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEEL 238
Query: 1721 NKKEAKLKE 1729
+ K E
Sbjct: 239 KELAKKYLE 247
Score = 34.5 bits (80), Expect = 0.67
Identities = 55/293 (18%), Positives = 115/293 (39%), Gaps = 43/293 (14%)
Query: 1003 ILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYE 1062
L YK V E L E ++ +++ + ++LR +K+ E
Sbjct: 13 TLKSYKDEVLE---ALHEL-----GVVHIEDLKEELSNERLRKLR-------SLLTKLSE 57
Query: 1063 -LEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQT 1121
L+++++ L + +V +L +L ++ KI E+E+ E++ ++
Sbjct: 58 ALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKI------EKEIKELEEEISE 111
Query: 1122 LEYEKQELLKQIQEESIASNF-----LKNELQSLQDAFSVMKSDNASLLLEKNTLMETKL 1176
LE E +EL ++I+ NF L + + + D L
Sbjct: 112 LENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKL--------E 163
Query: 1177 TLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPD-----LNAS 1231
+ ++ ++ ++ + +V ++ ++ EEL + L G P +
Sbjct: 164 SDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREIKEE 223
Query: 1232 IENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTE 1284
+E I KE+++ L E+ E K L+E+ A E E + E + L+T+
Sbjct: 224 LEEIEKERESLLEEL---KELAKKYLEELLALYEYLEIELERAEALSKFLKTD 273
Score = 33.0 bits (76), Expect = 2.0
Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 28/196 (14%)
Query: 1231 SIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEK-EALELRTEDLEYK 1289
S+E ++K+ + L ++ K+ + ++ + E++ +++ E + E +L DL
Sbjct: 83 SLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDL---DLSLL 139
Query: 1290 LQ-------------EKEKMIQELNEMKQSFFIGDSKDSVRY---SDEEHVQELRELQLM 1333
L +K + ++ ++++ +I K V +E E+ E
Sbjct: 140 LGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKK 199
Query: 1334 NESLQNEVLRSAT---EIDNMKETI----TYLEQYNLQLSKSQESSTTLTLLQSELAEQ- 1385
+ E+ T I +KE + E +L + + L E E
Sbjct: 200 LGFERLELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIE 259
Query: 1386 RTLNQQLVQIVNTKHT 1401
+ L + + T T
Sbjct: 260 LERAEALSKFLKTDKT 275
Score = 31.1 bits (71), Expect = 6.6
Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 53/288 (18%)
Query: 804 SILDLERNLD---EKLKEFNEKEI-SYNENIEASNHKIQQLTQETDTLKAELVAQAESTQ 859
I+ L+ D E L E I E + ++++L L L
Sbjct: 10 LIVTLKSYKDEVLEALHELGVVHIEDLKEELSNE--RLRKLRSLLTKLSEALD------- 60
Query: 860 LVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTE 919
++ L ++ + ++LE + ++ +E ++ EI E
Sbjct: 61 KLRSYLPKLNPLR-EEKKKVS----VKSLEELIKDVEEELEKIEK-------EIKELEEE 108
Query: 920 LSIIMEKCKQYEDKCIELE--STLDAKLTDFSTKE-------QLNKNKMAELSAMLESVQ 970
+S + + K+ E + LE D L+ + + ++K+ EL +
Sbjct: 109 ISELENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVEN 168
Query: 971 AENISIKQMNEELQALTETLKQTSNTHEEDRKILDEY---------KQRVQELDAKLAEE 1021
E IS + + + +E + L + + EL ++ EE
Sbjct: 169 VEYISTDKGYVYVVVVVL-----KELSDEVEEELKKLGFERLELEEEGTPSELIREIKEE 223
Query: 1022 IASKTSIIQTLEIQVKELQDK-----LRSYTHVENELGQYRSKVYELE 1064
+ ++L ++KEL K L Y ++E EL + + L+
Sbjct: 224 LEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALSKFLK 271
>gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional.
Length = 895
Score = 49.5 bits (118), Expect = 2e-05
Identities = 104/586 (17%), Positives = 235/586 (40%), Gaps = 61/586 (10%)
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
+ I L E+S + E +L S ELE+ +Q DDEKS S L+E
Sbjct: 173 DVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEI-----------E 221
Query: 159 FLQEEMQSLKDKLRDLDENV----TVEDIKKANESAIAKKDEVIEKLKAELESVEKALRE 214
L E + D +L + ++ED+K ES I + L ELE +E
Sbjct: 222 RLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAE---SDLSMELEKNNY-YKE 277
Query: 215 KESEVEEWGNNDAWGASDDVKE--ELEKLVVEKQELIEVI----QNHETLIAKLEADLTR 268
E + N+ + + + + + + + K++++ I + +I KL L +
Sbjct: 278 LEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLS-VLQK 336
Query: 269 VKEEKEAEVSGKLEQDAMVKELKS----------KVETLEASLKQKEQELEGWTDNDNWG 318
+ + S + + + EL+ +E+L+ +++ + +E + +
Sbjct: 337 DYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEI 396
Query: 319 SSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEW------- 371
E D +A+KKE EI KL S ++ L +L++ L E +E
Sbjct: 397 LKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCP 456
Query: 372 --GNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWG 429
G N + ++ L EK+ E++ ++ ++E + + E +
Sbjct: 457 VCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINK 516
Query: 430 TGNS-TELNNLRAKCSEFEKTIVELKSQEELLKQA--------LIDKENELSEWGQTNEW 480
+ N ++ + RA + + I ELK + + ++ L D +++ + W
Sbjct: 517 SINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNAL-- 574
Query: 481 GSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESR 540
S D+ T R S ++++L++ + + +++ + ++ + + ++
Sbjct: 575 AVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNK 634
Query: 541 IEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQE 600
E + + +E+L I+ NY ++ +++ + + ++T+ +++ + +
Sbjct: 635 Y----NEIQENKILIEKLRGKID-NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA 689
Query: 601 NIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
+ K + + L I +L + + + E LES ++ +I
Sbjct: 690 LDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAI 735
Score = 31.8 bits (72), Expect = 4.8
Identities = 107/609 (17%), Positives = 254/609 (41%), Gaps = 67/609 (11%)
Query: 705 VDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKN 764
++I++L +N K+ + L E + +D ++ + ++ ++L+N+ D + +
Sbjct: 159 LEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLK 218
Query: 765 DLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQ-----RSILDLERNLDEKLKEF 819
++E E NNA + NN + LN+ SL + N + S L +E + KE
Sbjct: 219 EIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKEL 278
Query: 820 NE--KEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQAL--LAAAPVDD 875
E +I + + N+ + D + + ++ K + L+ D
Sbjct: 279 EERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDY 338
Query: 876 NIVIENQQLKQNLESVKQE--------NTLV--VENLQNLIAQKDYEINAKVTELSIIME 925
N I+ + +L + E N+ + +E+L+ I + I +S I++
Sbjct: 339 NDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILK 398
Query: 926 KCKQYEDKCIELESTLDAKLTDFSTK-EQLNKNKMA------ELSAMLESVQAENIS--- 975
+ D + + ++ KL D S+K LN+ A ELS +E + +++
Sbjct: 399 IQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVC 458
Query: 976 ------------IKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIA 1023
I NE+ L E +++ ++ + + + K+R + L+++ +
Sbjct: 459 GTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSI 518
Query: 1024 SKTSIIQTLEIQVKELQDKLR--SYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEF 1081
++ + I++ +++++ K+ H + E + R K +LE L+++RT W++
Sbjct: 519 NEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLED----LDSKRTSWLNAL 574
Query: 1082 EVKTNT-LSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIAS 1140
V + + +++ + ++ E L E++ + + +++I+ E+
Sbjct: 575 AVISLIDIETNRSRSNEIKKQLNDL---ESRLQEIEIGFPDDKSYIDKSIREIENEANNL 631
Query: 1141 NFLKNELQSLQDAFSVMK---SDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQI 1197
N NE+Q + ++ + + E ++++ + +++ ++ DN K+ +
Sbjct: 632 NNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDN---LKKSRK 688
Query: 1198 VYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTL 1257
+D AR ++TI L T + + + + + TL M KK + L
Sbjct: 689 ALDDA----KANRARLESTIEILRTR-----INELSDRINDINETLESM-KKIKKAIGDL 738
Query: 1258 QEMQAALEK 1266
+ ++ A +K
Sbjct: 739 KRLREAFDK 747
>gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy
production and conversion].
Length = 660
Score = 48.1 bits (115), Expect = 4e-05
Identities = 60/315 (19%), Positives = 118/315 (37%), Gaps = 48/315 (15%)
Query: 22 DPELPLPLEPCQTTGSDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTT 81
+ E E Q + S E+ + ++ L +EV + +
Sbjct: 45 ELEKLKVAEVAQISLSSLLSEVLDYLRSVKGLEGRLFILPEEVEKLEAELKSLEEVIKPA 104
Query: 82 STVRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSY 141
+ E E R L E +S+L + +L +EELE +D + S+
Sbjct: 105 EKFSSEVE---------ELTRKLEERLSELDEELEDLEDLLEELE--PLAYLDFDLSLLR 153
Query: 142 QLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKL 201
L+ + + R + E + + + + E+++ + +A E ++K+
Sbjct: 154 GLKFLLVRLGL----VRREKLE---ALVGVIEDEVALYGENVEASVVIVVAHGAEDLDKV 206
Query: 202 KAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAK 261
L + + E + G ++ ELE+++ E Q+ + E+L ++
Sbjct: 207 SKILNELG-FELYEVPEFD--------GGPSELISELEEVIAEIQDEL------ESLRSE 251
Query: 262 LEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSG 321
LEA ++ EE A V LE + + ++ SK+ E +L +EGW D
Sbjct: 252 LEALAEKIAEELLA-VREILEIEKALGDVLSKLARTEYTL-----AIEGWVPAD------ 299
Query: 322 NEQDIEALKKENEEI 336
++E LKK
Sbjct: 300 ---EVEKLKKIINRA 311
Score = 42.7 bits (101), Expect = 0.002
Identities = 57/323 (17%), Positives = 112/323 (34%), Gaps = 42/323 (13%)
Query: 534 VQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEE 593
+ ++ I L E + + + GLV + + +L + + +
Sbjct: 4 EKMKKVSIIGLKSELDPVLAELHDFGLV-------HLEDLEEGEKGLKEL-EKLKVAEVA 55
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE 653
LS E+ L KGLE + L E+ L +L+S ++V EK +E
Sbjct: 56 QISLSSLLSEVLDYLRSV----KGLEGRLFILPEEVEKLEAELKSLEEVIKPAEKFS-SE 110
Query: 654 IQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKN 713
++EL KL +++ E + L+ EEL E + G + +
Sbjct: 111 VEELTRKLEE---RLSELDEELEDLEDLLEEL-EPLAYLDFDLSLLRGLKFLLV-----R 161
Query: 714 LQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISEL 773
L + E L +E ++ N + + ++ + K+S++
Sbjct: 162 LGLVRREKLEAL------------VGVIEDEVALYGENVEASVVIVVAHGAEDLDKVSKI 209
Query: 774 NNAQHNKNNEINDLN-KRISLFEENNAFLQRSILDLERNLDEKLKEFNEKE----ISYNE 828
N + E+ + + L E + I D +L +L+ EK ++ E
Sbjct: 210 LNELGFELYEVPEFDGGPSELISELEEVIA-EIQDELESLRSELEALAEKIAEELLAVRE 268
Query: 829 --NIEASNHKIQQLTQETDTLKA 849
IE + + T+ A
Sbjct: 269 ILEIEKALGDVLSKLARTEYTLA 291
Score = 39.3 bits (92), Expect = 0.022
Identities = 43/244 (17%), Positives = 96/244 (39%), Gaps = 30/244 (12%)
Query: 845 DTLKAELVAQAESTQLVKQ-EQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQ 903
+ LK VAQ + L+ + L + ++ + I +++++ +K ++ +
Sbjct: 47 EKLKVAEVAQISLSSLLSEVLDYLRSVKGLEGRLFILPEEVEKLEAELKSLEEVIKP-AE 105
Query: 904 NLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELE--STLDAKLTDFSTKEQLN------ 955
++ + LS + E+ + ED ELE + LD L+ + L
Sbjct: 106 KFSSEVEELTRKLEERLSELDEELEDLEDLLEELEPLAYLDFDLSLLRGLKFLLVRLGLV 165
Query: 956 -KNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQR---V 1011
+ K+ L ++E A + + + + + ++ KIL+E V
Sbjct: 166 RREKLEALVGVIEDEVALYGENVEASVVI--VVAHGAEDL---DKVSKILNELGFELYEV 220
Query: 1012 QELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVY-ELEQIQARL 1070
E D +E I+ +I ++ +++ L+ +L + K+ EL ++ L
Sbjct: 221 PEFDGGPSELISELEEVIAEIQDELESLRSELEA----------LAEKIAEELLAVREIL 270
Query: 1071 EAER 1074
E E+
Sbjct: 271 EIEK 274
Score = 37.3 bits (87), Expect = 0.090
Identities = 35/228 (15%), Positives = 73/228 (32%), Gaps = 29/228 (12%)
Query: 1523 LTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLH------VKLREAE 1576
L + DL + L + + +S L + ++ + L E
Sbjct: 30 LVHLEDLEEGEKGLKELEKLKVAE--VAQISLSSLLSEVLDYLRSVKGLEGRLFILPEEV 87
Query: 1577 ERVKSSATAYTSA-------SVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAE-----DV 1624
E++++ + S + L ++ L E+ E L++ L + E D
Sbjct: 88 EKLEAELKSLEEVIKPAEKFSSEVEELTRKLEERLSELDEELEDLEDLLEELEPLAYLDF 147
Query: 1625 VQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNE---------LTQLI 1675
L L + L + EK + +E + + L ++
Sbjct: 148 DLSLLRGLKFLLVRLGLVRREKLEALVGVIEDEVALYGENVEASVVIVVAHGAEDLDKVS 207
Query: 1676 STLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKK 1723
L E E G S+ +++ + I E+ +++ L EL
Sbjct: 208 KILNELGFELYEVPEFDGGPSELISELEEVIAEIQDELESLRSELEAL 255
>gnl|CDD|236892 PRK11281, PRK11281, hypothetical protein; Provisional.
Length = 1113
Score = 48.0 bits (115), Expect = 6e-05
Identities = 63/305 (20%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 1419 EELPKLKDLGGQVATLEKQLKTTSETLATKERQLAET---KEQLSLAQSQLEEVTQLMSS 1475
+ L K K L + +++ L+ T L +RQ ET K+QL+ A ++L + +
Sbjct: 46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAEL-- 103
Query: 1476 NDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLN--- 1532
+ + D + + + +E + +LQN Q + L E N ++
Sbjct: 104 -EALKDDNDEETRETLSTLSLRQLE--SRLAQTLDQLQNAQND----LAEYNSQLVSLQT 156
Query: 1533 -----QNTLYNENERLKQ--HLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATA 1585
Q LY ++RL+Q +LLK + L +++ L +AE+ + ++
Sbjct: 157 QPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRV-------LLQAEQALLNAQND 209
Query: 1586 YTSASVRSNQQVEAL-TSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQA 1644
S+ N Q++ L Q LT + ++L+ +L ++ + + +L+ + +++ Q+
Sbjct: 210 LQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQEAINSKRLTLS--EKTVQEAQS 267
Query: 1645 EKDNEIAQSLEFLQGELNNSYAKNNELTQ-LISTLQHQLQEARESLSAAGRLSDQLNQKS 1703
+ + Q+ + EL N +L+Q L+ + +++L L D+L Q
Sbjct: 268 QDEAARIQANPLVAQEL----EINLQLSQRLLKATEKLNTLTQQNLRVKNWL-DRLTQSE 322
Query: 1704 QTIQE 1708
+ I+E
Sbjct: 323 RNIKE 327
Score = 47.6 bits (114), Expect = 8e-05
Identities = 86/405 (21%), Positives = 151/405 (37%), Gaps = 77/405 (19%)
Query: 1369 QESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLG 1428
Q+ TL LL + Q+ +QL Q + + E+ L EE + L
Sbjct: 63 QDLEQTLALLDK-IDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE--TLS 119
Query: 1429 GQ-VATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLE--------------EVTQLM 1473
+ LE +L T + L + LAE QL Q+Q E ++ L+
Sbjct: 120 TLSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLL 179
Query: 1474 SSNDRPEADGEPAQEREVVAQHV---APVETSR---------------ERNELALRLQNL 1515
P+Q + A+ A + R +R+ L R+Q L
Sbjct: 180 KGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRL 239
Query: 1516 QEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTI-QDLHVKLRE 1574
+ + +L IN RL TL + + Q + + LV E I L +L +
Sbjct: 240 EHQLQLLQEAINSKRL---TLSEKTVQEAQSQDEAARIQANPLVAQELEINLQLSQRLLK 296
Query: 1575 AEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQA--SL 1632
A E+ T ++R ++ LT +++ EQ L+ L + + Q+ QA S
Sbjct: 297 ATEK----LNTLTQQNLRVKNWLDRLTQSERNIKEQISVLKGSLLLSRILYQQQQALPSA 352
Query: 1633 TNLQ--------IVLEQFQ-AEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQ 1683
++ + LEQF+ ++ + + Q ++ ++ + ++ L L
Sbjct: 353 DLIEGLADRIADLRLEQFEINQQRDALFQPDAYIDKLEAGHKSEVTD--EVRDALLQLLD 410
Query: 1684 EARESLSAAGRLSDQLNQKSQTIQELTEKVNQLME----ELNKKE 1724
E RE L +L+ QLN NQL +LN+++
Sbjct: 411 ERRELLD---QLNKQLN-------------NQLNLAINLQLNQQQ 439
Score = 43.0 bits (102), Expect = 0.002
Identities = 62/311 (19%), Positives = 111/311 (35%), Gaps = 86/311 (27%)
Query: 599 QENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN-EIQEL 657
+E +LK++L QA K + + E++ L KD D+ +TL +++L
Sbjct: 80 EETEQLKQQLAQAPAKLRQAQAELEAL-------------KDDNDEETRETLSTLSLRQL 126
Query: 658 HAKLINVEALVNQAQVEKQALDGKYEELKEKYEQM-SEKFENQTGKDSVDIDTLIKNLQS 716
++L + AQ + + + L+ + E+ + + N I L+K +
Sbjct: 127 ESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQ--QIRNLLKGGKV 184
Query: 717 KKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKI---NTLIQSKNDLEAKISEL 773
+ L ++ L E L N + Q K NT +Q +L
Sbjct: 185 GGKALRP--SQRVLL--------QAEQALLNAQNDLQRKSLEGNTQLQ----------DL 224
Query: 774 NNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEAS 833
Q + L RI E LQ +I N K + S
Sbjct: 225 LQKQR------DYLTARIQRLEHQLQLLQEAI--------------NSK------RLTLS 258
Query: 834 NHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNL-ESVK 892
+Q+ + + A+ ++ LV QE + N QL Q L ++ +
Sbjct: 259 EKTVQEAQSQDEA------ARIQANPLVAQELEI-------------NLQLSQRLLKATE 299
Query: 893 QENTLVVENLQ 903
+ NTL +NL+
Sbjct: 300 KLNTLTQQNLR 310
Score = 41.1 bits (97), Expect = 0.007
Identities = 103/508 (20%), Positives = 187/508 (36%), Gaps = 137/508 (26%)
Query: 984 QALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKL 1043
Q L +TL + ++ ++ KQ++ + AKL ++ Q +L
Sbjct: 63 QDLEQTLALLDKI-DRQKEETEQLKQQLAQAPAKL------------------RQAQAEL 103
Query: 1044 RSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKIT 1103
+ +E + L Q+++RL Q L + Q L YN+++
Sbjct: 104 EALKDDNDEETRETLSTLSLRQLESRLAQTLDQ-----------LQNAQNDLAEYNSQLV 152
Query: 1104 HAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNAS 1163
Q E + Q Y +++Q+ ++N L+ + ++
Sbjct: 153 SL----QTQPE---RAQAALYANS---QRLQQ-------IRNLLKGGKVGGKALRPSQRV 195
Query: 1164 LLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTT 1223
LL + L+ + L Q K L N Q+Q + + + L + R + + L
Sbjct: 196 LLQAEQALLNAQNDL--QRKSLEGNT----QLQDLLQKQRDYLTARIQRLEHQLQLL--- 246
Query: 1224 GAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRT 1283
+ + K TLSE KT+QE Q+ E + + LE+
Sbjct: 247 ---------QEAINSKRLTLSE---------KTVQEAQSQDEAARIQANPLVAQELEINL 288
Query: 1284 EDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLR 1343
+ + L+ EK LN + Q Q LR ++ Q+E
Sbjct: 289 QLSQRLLKATEK----LNTLTQ-------------------QNLRVKNWLDRLTQSE--- 322
Query: 1344 SATEIDNMKETITYLEQYNLQLS----KSQESSTTLTLLQSELA--------EQRTLNQQ 1391
N+KE I+ L + +L LS + Q++ + L++ LA EQ +NQQ
Sbjct: 323 -----RNIKEQISVL-KGSLLLSRILYQQQQALPSADLIE-GLADRIADLRLEQFEINQQ 375
Query: 1392 LVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQ 1451
+ + + Y ++ + SE +++D L + L E L +Q
Sbjct: 376 RDAL-----FQPDAYIDKLEAGHK--SEVTDEVRD------ALLQLLDERRELLDQLNKQ 422
Query: 1452 LAETKEQLSLAQS-QLEEVTQLMSSNDR 1478
L QL+LA + QL + QL+S +D
Sbjct: 423 LN---NQLNLAINLQLNQ-QQLLSVSDS 446
Score = 38.7 bits (91), Expect = 0.038
Identities = 59/319 (18%), Positives = 119/319 (37%), Gaps = 79/319 (24%)
Query: 322 NEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEK------EMELEEWGNND 375
+++ E LK++ + KL + ++ L LK ++ ++ L E L +
Sbjct: 78 QKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLAQ----- 132
Query: 376 SWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNST- 434
D+L Q + N ++ LQTQ + AL NS
Sbjct: 133 ----TLDQLQNAQNDLAEYNSQLVSLQTQPERAQAAL-----------------YANSQR 171
Query: 435 --ELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLR 492
++ NL K + + +QAL++ +N+L + + G+ DL +
Sbjct: 172 LQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQ---RKSLEGNTQLQDLLQKQ 228
Query: 493 EESGLLRQKLSE------QKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSR 546
+ R + E Q+ I SK T E + VQ+ +S+
Sbjct: 229 RDYLTARIQRLEHQLQLLQEAINSKRLTLSE--------------KTVQEAQSQ------ 268
Query: 547 ENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKK 606
++ + N V + L+ QL+ + E++ L+Q+N+ +K
Sbjct: 269 ---------DEAARIQANPLVAQE------LEINLQLSQRLLKATEKLNTLTQQNLRVKN 313
Query: 607 KLEQAVEKQKGLEEEIQQL 625
L++ + ++ ++E+I L
Sbjct: 314 WLDRLTQSERNIKEQISVL 332
Score = 33.3 bits (77), Expect = 1.7
Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 33/209 (15%)
Query: 1202 TQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAK-DKTLQEM 1260
++KL E + L T L I+ +E + LK+ A+ L++
Sbjct: 49 NKQKLLEAEDK--LVQQDLEQT--LALLDKIDRQKEETEQ-----LKQQLAQAPAKLRQA 99
Query: 1261 QAALEKHLSEKYQFEK---------EALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGD 1311
QA LE L + E LE R +LQ + + E N S +
Sbjct: 100 QAELEA-LKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYN----SQLVSL 154
Query: 1312 SKDSVR-----YSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLS 1366
R Y++ + +Q++R L+ ++ ++ L N
Sbjct: 155 QTQPERAQAALYANSQRLQQIR--NLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQR 212
Query: 1367 KSQESSTTLT-LLQSELAEQRTLNQQLVQ 1394
KS E +T L LLQ + T Q ++
Sbjct: 213 KSLEGNTQLQDLLQKQRDY-LTARIQRLE 240
Score = 32.6 bits (75), Expect = 2.5
Identities = 58/290 (20%), Positives = 112/290 (38%), Gaps = 42/290 (14%)
Query: 782 NEINDLNKRISLFEENNAFLQRSILDLERNLD--EKLKEFNEKEISYNENIEASNHKIQQ 839
+++ LNK+ L E+ Q DLE+ L +K+ E+ + + + K++Q
Sbjct: 43 AQLDALNKQKLLEAEDKLVQQ----DLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQ 98
Query: 840 LTQETDTLKAELVAQAE---STQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENT 896
E + LK + + ST ++Q ++ LA QL+ + + N+
Sbjct: 99 AQAELEALKDDNDEETRETLSTLSLRQLESRLAQT---------LDQLQNAQNDLAEYNS 149
Query: 897 LVV------ENLQNLI---AQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTD 947
+V E Q + +Q+ +I + + + + + ++ E L D
Sbjct: 150 QLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQND 209
Query: 948 FSTKEQLNKNKMAEL-SAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDE 1006
K ++ +L + + A I+++ +LQ L E + K L
Sbjct: 210 LQRKSLEGNTQLQDLLQKQRDYLTAR---IQRLEHQLQLLQEAINS---------KRLTL 257
Query: 1007 YKQRVQELD-AKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQ 1055
++ VQE A I + + Q LEI ++ L +L T N L Q
Sbjct: 258 SEKTVQEAQSQDEAARIQANPLVAQELEINLQ-LSQRLLKATEKLNTLTQ 306
>gnl|CDD|205692 pfam13514, AAA_27, AAA domain. This domain is found in a number of
double-strand DNA break proteins. This domain contains a
P-loop motif.
Length = 1118
Score = 46.3 bits (110), Expect = 2e-04
Identities = 126/723 (17%), Positives = 262/723 (36%), Gaps = 81/723 (11%)
Query: 1057 RSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMK 1116
+ ++ + LEAE I E ++KT T DL LD E+EL ++
Sbjct: 149 KPEINVALKELKELEAE----IREVQLKTRTWKDLVKALDE----------AEEELANLR 194
Query: 1117 NQMQTLEYEKQEL--LKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMET 1174
+++ LE EKQ L L+++ L+ +L +L + + + L
Sbjct: 195 KELRQLEKEKQRLERLRRLLPLLAERKALEQQLAALGEVIDLPPDAVERYEEARAELRAA 254
Query: 1175 KLTLEAQLKELADNETQYKQMQIVYEDTQRKLN-EELARRDATIATLNTTGAPDLNASIE 1233
+ LE + L + + ++ + E + E L ++ PD I
Sbjct: 255 RRNLELLTERLEALQAELDEISLDEELLAQAAAIEALHQQRGEYRN-AEQDLPDREGEIA 313
Query: 1234 NILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEK 1293
N + A L+++ ++ + A ++ ++E + KEAL+ + L+E+
Sbjct: 314 NAREAAAALLAQIGPDADEEAVESLRPSLAAKETVTELEK-RKEALDQALKSARDALEER 372
Query: 1294 EKMIQELNEMKQSF------------------------FIGDSKDSVRYSDEEHVQELRE 1329
E+ ++++ + + + V + E Q L
Sbjct: 373 ERELKQVRAQLAALPTVTVPEPLRAALADALRAGDIDAALAALEQEVAVAKRELAQALSR 432
Query: 1330 LQLMNESLQNEV-------------LRSATEIDN-MKETITYLEQYNLQLSKSQESSTTL 1375
L L L+ V L+ A EI ++ L + L + L
Sbjct: 433 LGLWRGDLEELVALPVPSAEQVQAFLKEAEEIMQAKRQKRDRLLELEEDLETLELQLRHL 492
Query: 1376 T-----LLQSELAEQRTLNQQLVQIVNTKHT---ESNNYHQEILRLNGILSEELPKLKDL 1427
+ E+A R L Q + + + + ++E + L++ L + L
Sbjct: 493 DAAGAVPTEEEVAAARARRDALWQDIRRGYALLEPTASAYEEAVESADQLADRLLREAQL 552
Query: 1428 GGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQ 1487
G++ +L +Q + L E++L + L+ + + P +
Sbjct: 553 VGELQSLRQQEEAARRRLEQLEKELEVLELALAALREAWQAQWAAAGLPLTPAEMEDWLA 612
Query: 1488 EREVVAQHVAPVETSR-ERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQH 1546
ER + V +R E + L R L+ L + + + E L +
Sbjct: 613 ERATAREQVRAYFKARAELDALLDRRARLRAALRAALKAVAIVLPGEEL--AELLELARQ 670
Query: 1547 LLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKS 1606
LL+ E + ++ ++D L EAEER + +A + + + ++
Sbjct: 671 LLEEAEKQAARKASLDERLRDAERALEEAEERHDEAQSALEAWQEQWYDALLEAGLGGRA 730
Query: 1607 LTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYA 1666
E L ++ +Q L +E+ A + E+ E + E+ + A
Sbjct: 731 SPAGALDALELLQNIKEKLQ-AADDLRQRIAAMERDLARFEEEVEALAEAVAPEMLGTPA 789
Query: 1667 KNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAK 1726
+ L+ +L+ AR++ +AA +L+++ I+E ++V++ L++ EA+
Sbjct: 790 D-----ETARALKQRLKRARDTAAAAEKLAEE-------IEEAEKEVSEAAAALDEAEAR 837
Query: 1727 LKE 1729
L
Sbjct: 838 LTA 840
Score = 36.7 bits (85), Expect = 0.15
Identities = 129/773 (16%), Positives = 275/773 (35%), Gaps = 90/773 (11%)
Query: 987 TETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSY 1046
E ++ R+ L+ +R++ L A+L E + + +EL + +
Sbjct: 241 VERYEEARAELRAARRNLELLTERLEALQAELDE-----------ISLD-EELLAQAAAI 288
Query: 1047 THVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAA 1106
+ + G+YR+ +L + + R + L Q+ + +
Sbjct: 289 EALHQQRGEYRNAEQDLPDREGEIANAREA-----------AAALLAQIGPDADEEAVES 337
Query: 1107 LVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLL 1166
L K + LE K+ L + ++ ++ L+ + +++ A+L
Sbjct: 338 LRPSLA--AKETVTELEKRKEALDQALKS-------ARDALEERERELKQVRAQLAAL-- 386
Query: 1167 EKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAP 1226
T+ E A D + ++ +R+L + L+R L A
Sbjct: 387 PTVTVPEPLRAALADALRAGDIDAALAALEQEVAVAKRELAQALSRLGLWRGDLEELVAL 446
Query: 1227 DLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDL 1286
+ ++ + K+A E+++ K L E++ LE + + E++
Sbjct: 447 PVPSAEQVQAFLKEA--EEIMQAKRQKRDRLLELEEDLETLELQLRHLDAAGAVPTEEEV 504
Query: 1287 EYKLQEKEKMIQELNEMKQSFFIGDS--KDSVRYSDE---------EHVQELRELQLMNE 1335
++ + Q++ S +++V +D+ + V EL+ L+ E
Sbjct: 505 AAARARRDALWQDIRRGYALLEPTASAYEEAVESADQLADRLLREAQLVGELQSLRQQEE 564
Query: 1336 SLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQI 1395
+ + + + E++ ++ + L + + T ++ LAE+ T +Q V+
Sbjct: 565 AARRRLEQLEKELEVLELALAALREAWQAQWAAAGLPLTPAEMEDWLAERATAREQ-VRA 623
Query: 1396 VNTKHTESNNYHQEILRLNGILS------------EELPKLKDLGGQVA-TLEKQLKTTS 1442
E + RL L EEL +L +L Q+ EKQ +
Sbjct: 624 YFKARAELDALLDRRARLRAALRAALKAVAIVLPGEELAELLELARQLLEEAEKQAARKA 683
Query: 1443 ---ETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPV 1499
E L ER L E +E+ AQS LE + G A + + +
Sbjct: 684 SLDERLRDAERALEEAEERHDEAQSALEAWQEQWYDALLEAGLGGRASPAGALDA-LELL 742
Query: 1500 ETSRER----NELALRLQNLQEEKTMLLTEINDLRLNQNTLYNEN------ERLKQHLLK 1549
+ +E+ ++L R+ ++ + E+ L LKQ L +
Sbjct: 743 QNIKEKLQAADDLRQRIAAMERDLARFEEEVEALAEAVAPEMLGTPADETARALKQRLKR 802
Query: 1550 TEEDN------TSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQ 1603
+ E+ +AE+ + + L EAE R+ + A ++ +
Sbjct: 803 ARDTAAAAEKLAEEIEEAEKEVSEAAAALDEAEARLTALLRAARCTTIEELLAAVERSDT 862
Query: 1604 VKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNN 1663
+ L ++ L+ L +A + L+ ++ + A +E+ LE L ++
Sbjct: 863 YRELRKRIAALERTLVRAGGGLS--------LEALVAEAAALDPDELPARLEELARDIEE 914
Query: 1664 SYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQL 1716
+ NEL Q + + +L + S A L + +++L E+ +L
Sbjct: 915 LEEELNELAQEVGAAKQEL-ARMDGGSTAAELEAERESLLAQLRDLAERYLEL 966
Score = 34.0 bits (78), Expect = 1.1
Identities = 122/823 (14%), Positives = 266/823 (32%), Gaps = 108/823 (13%)
Query: 574 NNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILR 633
N +L +L AE EV + ++ +L K L++A E+ L +E++QLE +
Sbjct: 153 NVALKELKELEAEIR----EVQLKTRTWKDLVKALDEAEEELANLRKELRQLE----KEK 204
Query: 634 EQLESKDQVDDSI--EKTLRNEIQELH----------AKLINVEALVNQAQVEKQALDGK 681
++LE ++ + K L ++ L + A + A+ + L +
Sbjct: 205 QRLERLRRLLPLLAERKALEQQLAALGEVIDLPPDAVERYEEARAELRAARRNLELLTER 264
Query: 682 YEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENL 741
E L+ + +++S + + + I+ L + + L D + + N + L
Sbjct: 265 LEALQAELDEIS--LDEELLAQAAAIEALHQQRGEYRNAEQDLPDREGEIANAREAAAAL 322
Query: 742 EIQLDNLNTN-----------YQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKR 790
Q+ ++ + L + K L+ + +A + E+ + +
Sbjct: 323 LAQIGPDADEEAVESLRPSLAAKETVTELEKRKEALDQALKSARDALEERERELKQVRAQ 382
Query: 791 ISLFEENNAFLQ---------------RSILDLERNLDEKLKEFNEKEISYNENIEASNH 835
++ ++ LE+ + +E +
Sbjct: 383 LAALPTVTVPEPLRAALADALRAGDIDAALAALEQEVAVAKRELAQALSRLGLWRGDLEE 442
Query: 836 KIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVD-DNIVIENQQLKQNLESVKQE 894
+ + ++A L E Q +Q++ L D + + ++ + L +E
Sbjct: 443 LVALPVPSAEQVQAFLKEAEEIMQAKRQKRDRLLELEEDLETLELQLRHLDAAGAVPTEE 502
Query: 895 NTLVVENLQ-----------NLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDA 943
+ L+ V + ++ + EL+S
Sbjct: 503 EVAAARARRDALWQDIRRGYALLEPTASAYEEAVESADQLADRLLREAQLVGELQSLRQQ 562
Query: 944 KLTDFSTKEQLNKNKMA---ELSAMLESVQAE------NISIKQMNEELQALTETLKQTS 994
+ EQL K L+A+ E+ QA+ ++ +M + L T ++
Sbjct: 563 EEAARRRLEQLEKELEVLELALAALREAWQAQWAAAGLPLTPAEMEDWLAE-RATAREQV 621
Query: 995 NTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELG 1054
+ + R LD R L A L + + ++ E+ EL + R +
Sbjct: 622 RAYFKARAELDALLDRRARLRAALRAALKAVAIVLPGEELA--ELLELARQLLEEAEKQA 679
Query: 1055 QYRSKVYE---------------LEQIQARLEAERTQWIHEF-------EVKTNTLSDLQ 1092
++ + E ++ Q+ LEA + QW D
Sbjct: 680 ARKASLDERLRDAERALEEAEERHDEAQSALEAWQEQWYDALLEAGLGGRASPAGALDAL 739
Query: 1093 TQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNF------LKNE 1146
L K+ A + Q + M+ + E E + L + + E + + LK
Sbjct: 740 ELLQNIKEKLQAADDLRQRIAAMERDLARFEEEVEALAEAVAPEMLGTPADETARALKQR 799
Query: 1147 LQSLQDAFSV---MKSDNASLLLEKNTLMETKLTLEAQLKELAD--NETQYKQMQIVYED 1201
L+ +D + + + E + EA+L L T +++ E
Sbjct: 800 LKRARDTAAAAEKLAEEIEEAEKEVSEAAAALDEAEARLTALLRAARCTTIEELLAAVER 859
Query: 1202 TQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQ 1261
+ + G L A + L L++ + L+E
Sbjct: 860 SDTYRELRKRIAALERTLVRAGGGLSLEALVAEAAALDPDELPARLEELARDIEELEEEL 919
Query: 1262 AALEKHLSEKYQFEKEALELRTE--DLEYKLQEKEKMIQELNE 1302
L + + Q E ++ + +LE + + +++L E
Sbjct: 920 NELAQEVGAAKQ-ELARMDGGSTAAELEAERESLLAQLRDLAE 961
Score = 32.0 bits (73), Expect = 4.2
Identities = 60/313 (19%), Positives = 105/313 (33%), Gaps = 22/313 (7%)
Query: 1434 LEKQLKTTSETLA--TKERQLAET-KEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQERE 1490
L K L E LA KE + E K++L + L + + + + A GE
Sbjct: 179 LVKALDEAEEELANLRKELRQLEKEKQRLERLRRLLPLLAERKALEQQLAALGEVIDLPP 238
Query: 1491 VVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNEN--ERLKQHLL 1548
+ E L+ L E L E++++ L++ L E L Q
Sbjct: 239 DAVERYEEARA--ELRAARRNLELLTERLEALQAELDEISLDEELLAQAAAIEALHQQRG 296
Query: 1549 KTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLT 1608
+ +L E I A + +V S + A V L
Sbjct: 297 EYRNA-EQDLPDREGEIA---NAREAAAALLAQIGPDADEEAVESLRPSLAAKETVTELE 352
Query: 1609 EQKEKLQEKLYQAEDV----------VQKHQASLTNLQIVLEQFQAEKDNEIAQSLEF-L 1657
++KE L + L A D V+ A+L + + A D A ++ L
Sbjct: 353 KRKEALDQALKSARDALEERERELKQVRAQLAALPTVTVPEPLRAALADALRAGDIDAAL 412
Query: 1658 QGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLM 1717
EL Q +S L + E ++ ++Q+ + +E+ + Q
Sbjct: 413 AALEQEVAVAKRELAQALSRLGLWRGDLEELVALPVPSAEQVQAFLKEAEEIMQAKRQKR 472
Query: 1718 EELNKKEAKLKEV 1730
+ L + E L+ +
Sbjct: 473 DRLLELEEDLETL 485
>gnl|CDD|225803 COG3264, COG3264, Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane].
Length = 835
Score = 43.5 bits (103), Expect = 0.001
Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 22/209 (10%)
Query: 1508 LALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQD 1567
L R + L E L + L+ N+ + E E + IQ
Sbjct: 13 LQSRRELLTAESAQLEAALQLLQEAVNSKR----------QEEAEPAAEEAELQAELIQQ 62
Query: 1568 LHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQK 1627
+ + + + +++ AL S + L +L + + +
Sbjct: 63 ELAINDQLSQALN-----------QQTERLNALASDDRQLANLLLQLLQSSRTIREQIAV 111
Query: 1628 HQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARE 1687
+ SL +I+L+Q + Q + E + A+ + L + E R+
Sbjct: 112 LRGSLLLSRILLQQLGPLPEAGQPQEQFEVTQERDALQAEKAYINALEGQAEQLTAEVRD 171
Query: 1688 SLSAAGRL-SDQLNQKSQTIQELTEKVNQ 1715
L + LN + ++ ++NQ
Sbjct: 172 ILDQILDTRRELLNSLLSQREAISLQLNQ 200
Score = 40.8 bits (96), Expect = 0.009
Identities = 18/103 (17%), Positives = 44/103 (42%)
Query: 577 LDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQL 636
L QL+ + E + L+ ++ +L L Q ++ + + E+I L + R L
Sbjct: 64 LAINDQLSQALNQQTERLNALASDDRQLANLLLQLLQSSRTIREQIAVLRGSLLLSRILL 123
Query: 637 ESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALD 679
+ + ++ + + E+ + L +A +N + + + L
Sbjct: 124 QQLGPLPEAGQPQEQFEVTQERDALQAEKAYINALEGQAEQLT 166
Score = 36.2 bits (84), Expect = 0.22
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 22/182 (12%)
Query: 1362 NLQ-LSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKH-TESNNYHQEILRLNGILSE 1419
LQ L +S+ T Q E A Q VN+K E+ +E ++ +
Sbjct: 8 VLQELLQSRRELLTAESAQLEAALQLLQEA-----VNSKRQEEAEPAAEEAELQAELIQQ 62
Query: 1420 ELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQ-----LMS 1474
EL L + ++L LA+ +RQLA QL + + E L+
Sbjct: 63 ELAINDQLSQALNQQTERL----NALASDDRQLANLLLQLLQSSRTIREQIAVLRGSLLL 118
Query: 1475 SNDR------PEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEIND 1528
S G+P ++ EV + A N L + + L E +L +I D
Sbjct: 119 SRILLQQLGPLPEAGQPQEQFEVTQERDALQAEKAYINALEGQAEQLTAEVRDILDQILD 178
Query: 1529 LR 1530
R
Sbjct: 179 TR 180
Score = 30.8 bits (70), Expect = 9.6
Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 42/218 (19%)
Query: 436 LNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREES 495
+N+ R + E E E + Q EL++Q L N+ + Q LN E
Sbjct: 38 VNSKRQE--EAEPAAEEAELQAELIQQEL--AIND--QLSQA----------LNQQTERL 81
Query: 496 GLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRV 555
L+ ++ L QL + + + +Q+ + + R +
Sbjct: 82 ----NALASDDRQLANLLLQLLQSSRT-------IREQIAVLRGSLLLS-------RILL 123
Query: 556 EQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQ 615
+QLG + E QE + D A L+ + L+ E++ L+Q ++ +
Sbjct: 124 QQLGPLPEAGQPQEQFEVTQERDALQAEKAYINALEGQAEQLTA---EVRDILDQILDTR 180
Query: 616 KGL-EEEIQQLEE-DTSILREQLESKDQVDDSIEKTLR 651
+ L + Q E + ++QL + D + L
Sbjct: 181 RELLNSLLSQREAISLQLNQQQLSA---ASDELRSLLH 215
Score = 30.8 bits (70), Expect = 9.9
Identities = 46/210 (21%), Positives = 74/210 (35%), Gaps = 20/210 (9%)
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQA 677
L E QLE +L+E + SK Q + E E EL A+LI E +N QA
Sbjct: 20 LTAESAQLEAALQLLQEAVNSKRQEEA--EPAA--EEAELQAELIQQELAINDQL--SQA 73
Query: 678 LDGKYEELKEKYEQMSEKFENQTGKDSVD-----IDTLIKNLQSKKEELCRLLDEKNTLD 732
L+ + E L + N + I I L+ LL + L
Sbjct: 74 LNQQTERL-NALASDDRQLANL--LLQLLQSSRTIREQIAVLRGSLLLSRILLQQLGPLP 130
Query: 733 NIKVEKENLEI--QLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEI-NDLNK 789
+E E+ + D L + IN L L A++ ++ + + E+ N L
Sbjct: 131 EAGQPQEQFEVTQERDAL-QAEKAYINALEGQAEQLTAEVRDILDQILDTRRELLNSLLS 189
Query: 790 RISLFEENNAFLQRSILDLERNLDEKLKEF 819
+ + Q+ + L L +
Sbjct: 190 QREAI--SLQLNQQQLSAASDELRSLLHQQ 217
>gnl|CDD|222878 PHA02562, 46, endonuclease subunit; Provisional.
Length = 562
Score = 43.1 bits (102), Expect = 0.002
Identities = 43/254 (16%), Positives = 101/254 (39%), Gaps = 38/254 (14%)
Query: 593 EVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN 652
+++VLS+ + K K+ + L ++IQ L+ +++Q+++ ++ + K
Sbjct: 161 DISVLSEMDKLNKDKI-------RELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGE 213
Query: 653 EIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIK 712
I K + LV +A+ K + EEL ++ + E+ + ++T
Sbjct: 214 NIARKQNK---YDELVEEAKTIKAEI----EELTDELLNLVMDIEDPSA-ALNKLNTAAA 265
Query: 713 NLQSKKEELCRLL-----------------DEKNTLDNIKVEKENLEIQLDNLNTNYQ-- 753
++SK E+ +++ + + + IK + + L+ L+ L+T
Sbjct: 266 KIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDEL 325
Query: 754 ----DKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLE 809
D+ N + +L+ KIS + ++ + I + + L+
Sbjct: 326 EEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQ 385
Query: 810 RNLDEKLKEFNEKE 823
LD+ +K +E
Sbjct: 386 DELDKIVKTKSELV 399
Score = 35.8 bits (83), Expect = 0.24
Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 31/202 (15%)
Query: 710 LIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAK 769
I+ + K E + ++N D + E + ++ +++ L D++ L+ D A
Sbjct: 203 NIEEQRKKNGE--NIARKQNKYDELVEEAKTIKAEIEELT----DELLNLVMDIEDPSAA 256
Query: 770 ISELNNAQHNKNNEINDLNKRISLFEENN----------------AFLQRSILDLE---R 810
+++LN A ++I K I ++E+ ++ + +L+
Sbjct: 257 LNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLE 316
Query: 811 NLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAA 870
LD + E E +NE + K+ +L + T K L+ + + VK L A
Sbjct: 317 KLDTAIDELEEIMDEFNEQSK----KLLELKNKISTNKQSLITLVDKAKKVKAAIEELQA 372
Query: 871 APVDDNIVIENQQLKQNLESVK 892
VD+ + +L+ L+ +
Sbjct: 373 EFVDNAEELA--KLQDELDKIV 392
Score = 32.7 bits (75), Expect = 2.5
Identities = 35/239 (14%), Positives = 89/239 (37%), Gaps = 27/239 (11%)
Query: 919 ELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAE----NI 974
++ I ++ K Y E + K + + A +E + E +
Sbjct: 189 KIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVM 248
Query: 975 SIKQMNEELQALTETLKQTSNTHEEDRKILDEY---------KQRVQELDAKLAEEIASK 1025
I+ + L L + + E+ +K++ Y Q++ E ++ +I K
Sbjct: 249 DIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRI-TKIKDK 307
Query: 1026 TSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKT 1085
+Q +++L + + +E + K+ EL + ++ + I
Sbjct: 308 LKELQH---SLEKLDTAIDELEEIMDEFNEQSKKLLEL---KNKISTNKQSLITL----V 357
Query: 1086 NTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLK 1144
+ ++ ++ A+ +EL ++++++ + K EL+K+ I ++ LK
Sbjct: 358 DKAKKVKAAIEELQAEFVDN---AEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
Score = 31.5 bits (72), Expect = 5.0
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 37/248 (14%)
Query: 948 FSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEY 1007
S ++LNK+K+ EL N I+ ++ ++ + + +K + EE RK E
Sbjct: 165 LSEMDKLNKDKIREL----------NQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGEN 214
Query: 1008 KQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKV-YELEQI 1066
R Q +L EE + + I+ L ++ L + + N+L +K+ ++EQ
Sbjct: 215 IARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQF 274
Query: 1067 QARLEAER--------TQWIHEFEVK----TNTLSDLQTQLDTYNAKITHAALVEQE--- 1111
Q ++ TQ I E + + L +LQ L+ + I + E
Sbjct: 275 QKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNE 334
Query: 1112 ----LGEMKNQMQTLEYEKQELLKQ-------IQEESIASNFLKNELQSLQDAFSVMKSD 1160
L E+KN++ T + L+ + I+E EL LQD +
Sbjct: 335 QSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKT 394
Query: 1161 NASLLLEK 1168
+ L+ EK
Sbjct: 395 KSELVKEK 402
Score = 30.8 bits (70), Expect = 7.5
Identities = 29/177 (16%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 1563 QTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAE 1622
Q IQ L +K+ ++++K+ ++ + + ++ L E+ + ++ ++ +
Sbjct: 181 QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELT 240
Query: 1623 DVVQKH---QASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNEL---TQLIS 1676
D + + L A+ ++I Q Q + Y K TQ IS
Sbjct: 241 DELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQ----FQKVIK-MYEKGGVCPTCTQQIS 295
Query: 1677 TLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNNG 1733
++ + ++ L +L + + +++ ++M+E N++ KL E+ N
Sbjct: 296 EGPDRITKIKDKLK-------ELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNK 345
>gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein.
Mitofilin controls mitochondrial cristae morphology.
Mitofilin is enriched in the narrow space between the
inner boundary and the outer membranes, where it forms a
homotypic interaction and assembles into a large
multimeric protein complex. The first 78 amino acids
contain a typical amino-terminal-cleavable mitochondrial
presequence rich in positive-charged and hydroxylated
residues and a membrane anchor domain. In addition, it
has three centrally located coiled coil domains.
Length = 493
Score = 42.7 bits (101), Expect = 0.002
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 132 KIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAI 191
+ + LEE E+ + T + +Q L DL +++ +++K ES I
Sbjct: 110 TPKSIQELVEALEELLEELLKETASDP----VVQELVSIFNDLIDSIKEDNLKDDLESLI 165
Query: 192 AKKDEVIEKLKAELESVEKALREK-ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIE 250
A E +++L +L ++ E+ E ++E +++ +LE+ ++ + E E
Sbjct: 166 ASAKEELDQLSKKLAELKAEEEEELERALKE--------KREELLSKLEEELLARLESKE 217
Query: 251 VIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEG 310
L +L + R KEE + KL Q EL+ + E E LK +
Sbjct: 218 -----AALEKQLRLEFEREKEELRKKYEEKLRQ-----ELERQAEAHEQKLKNELALQA- 266
Query: 311 WTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQE----STLAKLKTHSESLQKQLLEKEM 366
IE ++ N+EIKEK+ ++ + LA+L + + L+K L +
Sbjct: 267 ---------------IELQREFNKEIKEKVEEERNGRLAKLAELNSRLKGLEKALDSRSE 311
Query: 367 ELEE 370
+E
Sbjct: 312 AEDE 315
Score = 37.3 bits (87), Expect = 0.086
Identities = 68/338 (20%), Positives = 129/338 (38%), Gaps = 35/338 (10%)
Query: 556 EQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELK--------KK 607
E+L +E DP + + + +L+ + ++V + Q + +
Sbjct: 44 EELVDYLEEEDPTLRDPQISVVSSVTKLSKGPKDEPKQVKIPRQSGLSEEVAEAEAKATS 103
Query: 608 LEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLIN--VE 665
+ K ++E ++ LEE L + + D V + + I + + +E
Sbjct: 104 VAAEATTPKSIQELVEALEELLEEL-LKETASDPVVQELVSIFNDLIDSIKEDNLKDDLE 162
Query: 666 ALVNQAQVEKQALDGKYEELKEK-YEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRL 724
+L+ A+ E L K ELK + E++ + + + + L + L + E
Sbjct: 163 SLIASAKEELDQLSKKLAELKAEEEEELERALKEKREEL---LSKLEEEL-LARLESKEA 218
Query: 725 LDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKN-DLEAKISE--LNNAQHNKN 781
EK + EKE L Y++K+ ++ + E K+ A +
Sbjct: 219 ALEKQLRLEFEREKEELR-------KKYEEKLRQELERQAEAHEQKLKNELALQAIELQR 271
Query: 782 NEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLT 841
++ +++ EE N L L L+ +LK EK + E NHK+QQL
Sbjct: 272 EFNKEIKEKV--EEERNGRL----AKLAE-LNSRLKGL-EKALDSRSEAEDENHKVQQLW 323
Query: 842 QETDTLKAEL-VAQAESTQLVKQEQALLAAAPVDDNIV 878
+ LK+ L A S + + +E L DD +V
Sbjct: 324 LAVEALKSALKSGSAGSPRPLVKELDALKELAKDDELV 361
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional.
Length = 520
Score = 42.8 bits (102), Expect = 0.002
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 26/187 (13%)
Query: 120 SRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEM-QSLKDKLRDLDENV 178
++I+E E++ ++ +++ K + ++++A+ + E L+ E + L+++ +L +
Sbjct: 31 AKIKEAEEEAKRILEEAKKEAEAIKKEAL--LEAKEEIHKLRNEFEKELRERRNELQKL- 87
Query: 179 TVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEEL 238
E E + +K E++EK + ELE EK L +K+ E+E+ +EEL
Sbjct: 88 --EKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKK------------EEEL 133
Query: 239 EKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLE 298
E+L+ E+ + +E I AK E L +V+EE E + ++KE++ + + E
Sbjct: 134 EELIEEQLQELERISGLTAEEAK-EILLEKVEEEARHEAA------VLIKEIEEEAK-EE 185
Query: 299 ASLKQKE 305
A K KE
Sbjct: 186 ADKKAKE 192
Score = 40.5 bits (96), Expect = 0.009
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 99 EKIRALNEEVSQLKTK-ENELHSR---IEELEDKLQQK----------IDDEKSVSYQLE 144
E + EE+ +L+ + E EL R +++LE +L QK ++ + +LE
Sbjct: 57 EALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREE---ELE 113
Query: 145 EKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENV---TVEDIKKANESAIAKKDEVIEKL 201
+K E+ Q + +EE++ L ++ E + T E+ K+ ++EK+
Sbjct: 114 KKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKE----------ILLEKV 163
Query: 202 KAELESVEKALREKESEVE 220
+ E E A+ KE E E
Sbjct: 164 EEEAR-HEAAVLIKEIEEE 181
Score = 40.1 bits (95), Expect = 0.011
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 235 KEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKV 294
+EE ++++ E ++ E I+ L AK E R + EKE ++E ++++
Sbjct: 37 EEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKE------------LRERRNEL 84
Query: 295 ETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHS 354
+ LE L QKE+ L+ + +E L+K EE+++K + E +L+
Sbjct: 85 QKLEKRLLQKEENLD--------------RKLELLEKREEELEKKEKELEQKQQELEKKE 130
Query: 355 ESLQKQLLEKEMELEE 370
E L++ + E+ ELE
Sbjct: 131 EELEELIEEQLQELER 146
Score = 37.1 bits (87), Expect = 0.097
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLES--- 638
+L ++E LD ++ +L + EL+KK ++ +KQ+ LE++ ++LEE ++LE
Sbjct: 90 RLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISG 149
Query: 639 ------KDQVDDSIEKTLRNEIQEL 657
K+ + + +E+ R+E L
Sbjct: 150 LTAEEAKEILLEKVEEEARHEAAVL 174
Score = 35.9 bits (84), Expect = 0.19
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 599 QENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELH 658
+E +L+ + E+ + ++ E+Q+LE+ E L+ K ++ + E+ L + +EL
Sbjct: 64 EEIHKLRNEFEKELRER---RNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELE 120
Query: 659 AKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTG 701
K +Q L+ K EEL+E E+ ++ E +G
Sbjct: 121 QK--------------QQELEKKEEELEELIEEQLQELERISG 149
Score = 35.1 bits (82), Expect = 0.40
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 1605 KSLTEQKEKLQEKLYQAEDVVQ--KHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELN 1662
K + E K K E+ +A+ +++ K +A + +LE K+ EF + EL
Sbjct: 26 KKIAEAKIKEAEE--EAKRILEEAKKEAEAIKKEALLEA----KEEIHKLRNEFEK-ELR 78
Query: 1663 NSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNK 1722
+ NEL +L + +L + E+L R + L ++ + +++ +++ Q +EL K
Sbjct: 79 ---ERRNELQKL----EKRLLQKEENLD---RKLELLEKREEELEKKEKELEQKQQELEK 128
Query: 1723 KEAKLKE 1729
KE +L+E
Sbjct: 129 KEEELEE 135
Score = 34.4 bits (80), Expect = 0.65
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 1571 KLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQA 1630
K++EAEE K + + EA + ++L E KE++ + + E +++ +
Sbjct: 32 KIKEAEEEAKR---------ILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRN 82
Query: 1631 SLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLS 1690
L L+ + Q E L +L + EL + L+ + QE +
Sbjct: 83 ELQKLE-----------KRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEE 131
Query: 1691 AAGRLSDQLNQKSQTIQELT--EKVNQLMEELNKKEAK 1726
L ++ Q+ + I LT E L+E++ ++EA+
Sbjct: 132 ELEELIEEQLQELERISGLTAEEAKEILLEKV-EEEAR 168
Score = 32.1 bits (74), Expect = 3.0
Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 976 IKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQ 1035
+++ ELQ L + L Q + ++L++ ++ +++ + +L ++ + LE
Sbjct: 77 LRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
Query: 1036 VKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFE 1082
++E +L + L +K LE+++ E I E E
Sbjct: 137 IEEQLQELERIS----GLTAEEAKEILLEKVEEEARHEAAVLIKEIE 179
Score = 32.1 bits (74), Expect = 3.3
Identities = 26/147 (17%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 909 KDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLES 968
++ + A+ + ++E ++ E E L + + E+ K L LE
Sbjct: 45 EEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLEL 104
Query: 969 VQAENISIKQMNEELQALTETLKQTSNT----HEEDRKIL--------DEYKQRV-QELD 1015
++ +++ +EL+ + L++ EE + L +E K+ + ++++
Sbjct: 105 LEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAKEILLEKVE 164
Query: 1016 AKLAEEIASKTSIIQTLEIQVKELQDK 1042
+ E A +I+ +E + KE DK
Sbjct: 165 EEARHEAA---VLIKEIEEEAKEEADK 188
Score = 31.7 bits (73), Expect = 4.5
Identities = 33/128 (25%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 605 KKKLEQAVEKQKGLEEEIQQLEEDTSILREQ-LESKDQVDDSIEKTLRNEI-QELHAKLI 662
+ K+++A E+ K + EE + +E +I +E LE+K+++ LRNE +EL +
Sbjct: 30 EAKIKEAEEEAKRILEEAK--KEAEAIKKEALLEAKEEI-----HKLRNEFEKELRERRN 82
Query: 663 NVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELC 722
++ L + +++ LD K E L+++ E++ +K + ++ + L+ K+EEL
Sbjct: 83 ELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKE--------LEQKQQELEKKEEELE 134
Query: 723 RLLDEKNT 730
L++E+
Sbjct: 135 ELIEEQLQ 142
Score = 31.3 bits (72), Expect = 5.1
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 767 EAKISELNNAQHNKNNEI-NDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEIS 825
+ + E H NE +L +R + ++ L++ +L E NLD KL+ ++E
Sbjct: 56 KEALLEAKEEIHKLRNEFEKELRERRNELQK----LEKRLLQKEENLDRKLELLEKRE-- 109
Query: 826 YNENIEASNHKIQQLTQETDTLKAEL 851
E +E +++Q QE + + EL
Sbjct: 110 --EELEKKEKELEQKQQELEKKEEEL 133
Score = 31.3 bits (72), Expect = 6.2
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 833 SNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVK 892
+ KI++ +E + E +AE+ +++ALL A E +L+ E
Sbjct: 29 AEAKIKEAEEEAKRILEEAKKEAEA----IKKEALLEAK-------EEIHKLRNEFEKEL 77
Query: 893 QENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKE 952
+E ++ L+ + QK+ ++ K +E ++ E++ + E L+ K + KE
Sbjct: 78 RERRNELQKLEKRLLQKEENLDRK-------LELLEKREEELEKKEKELEQKQQELEKKE 130
Query: 953 QLNKNKMAELSAMLESV------QAENISIKQMNEELQA 985
+ + + E LE + +A+ I ++++ EE +
Sbjct: 131 EELEELIEEQLQELERISGLTAEEAKEILLEKVEEEARH 169
Score = 30.5 bits (70), Expect = 8.9
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 387 LQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEF 446
++E + ++ +L+ +LL EE L +K LE L K E
Sbjct: 73 FEKELRERRNELQKLEKRLLQKEENLDRKLELLEK-------------REEELEKKEKEL 119
Query: 447 EKTIVELKSQEELLKQALIDKENELSE 473
E+ EL+ +EE L++ + ++ EL
Sbjct: 120 EQKQQELEKKEEELEELIEEQLQELER 146
>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein. This entry is a highly
conserved protein present in eukaryotes.
Length = 680
Score = 42.6 bits (100), Expect = 0.002
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 1108 VEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLE 1167
+EQ++ +++ ++Q + EL QI + LK++L L+ ++++ S++
Sbjct: 411 LEQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKKENDMLQTKLNSMVSA 470
Query: 1168 KNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPD 1227
K ++ ++E +LK AD+ ++ Q+ E ++K EE A R A A + +
Sbjct: 471 KQKDKQSMQSMEKRLKSEADSRVNAEK-QLAEEKKRKKEEEETAARAAAQAAASREECAE 529
Query: 1228 LNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLE 1287
LK+ L +KK E K +E LEK E ++++ E TE L
Sbjct: 530 -------SLKQAKQDLEMEIKKLEHDLKLKEEECRMLEKEAQELRKYQESEKE--TEVLM 580
Query: 1288 YKLQEKEKMIQELNEM 1303
LQ +Q+ N M
Sbjct: 581 SALQ----AMQDKNLM 592
Score = 38.4 bits (89), Expect = 0.047
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 962 LSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEE 1021
L ++ +QAE +Q EL+ L ++ + L + K+ L KL
Sbjct: 411 LEQDIKKLQAELQQARQNESELRNQISLL---TSLERSLKSDLGQLKKENDMLQTKLNSM 467
Query: 1022 IASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEF 1081
+++K Q+++ K L+ + S + E +L + + + E E+ AR A Q
Sbjct: 468 VSAKQKDKQSMQSMEKRLKSEADSRVNAEKQLAEEKKRKKEEEETAARAAA---QAAASR 524
Query: 1082 EVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASN 1141
E +L + L+ K+ H +++E + + LE E QEL K + E
Sbjct: 525 EECAESLKQAKQDLEMEIKKLEHDLKLKEE------ECRMLEKEAQELRKYQESEK---- 574
Query: 1142 FLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLE 1179
E + L A M+ N L+LE + ET+L L+
Sbjct: 575 ----ETEVLMSALQAMQDKN--LMLENSLSAETRLKLD 606
Score = 36.8 bits (85), Expect = 0.13
Identities = 44/223 (19%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
EL + R+L ++ QLK + + L +++ + Q+ +S+ +L+ +A
Sbjct: 431 ELRNQISLLTSLERSLKSDLGQLKKENDMLQTKLNSMVSAKQKDKQSMQSMEKRLKSEA- 489
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESV 208
+ ++++ K K + +E E +A A A ++E E LK + +
Sbjct: 490 ------DSRVNAEKQLAEEK-KRKKEEE----ETAARAAAQAAASREECAESLKQAKQDL 538
Query: 209 EKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEA--DL 266
E +++ E +++ ++ LEK E ++ E + E L++ L+A D
Sbjct: 539 EMEIKKLEHDLK---------LKEEECRMLEKEAQELRKYQESEKETEVLMSALQAMQDK 589
Query: 267 TRVKEEK-EAEVSGKLEQDAMVKELKSKVETLEASLKQKEQEL 308
+ E AE KL+ + + ++K ++E ++ ++E E+
Sbjct: 590 NLMLENSLSAETRLKLDLFSALGDVKRQLEIAHGAIYKREAEI 632
Score = 33.7 bits (77), Expect = 1.1
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 189 SAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASD--DVKEELEKLVVEKQ 246
SAI + ++ I+KL+AEL+ + E +++ + + SD +K+E + L +
Sbjct: 406 SAIERLEQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKKENDMLQTKLN 465
Query: 247 ELIEVIQNHETLIAKLEADLTRVKEEKEAEVSG-----------KLEQD----AMVKELK 291
++ Q + + +E R+K E ++ V+ K E++ A +
Sbjct: 466 SMVSAKQKDKQSMQSME---KRLKSEADSRVNAEKQLAEEKKRKKEEEETAARAAAQAAA 522
Query: 292 SKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEI---KEKLAKQE---S 345
S+ E E SLKQ +Q+LE E++ L+KE +E+ +E + E S
Sbjct: 523 SREECAE-SLKQAKQDLEMEIKKLEHDLKLKEEECRMLEKEAQELRKYQESEKETEVLMS 581
Query: 346 TLAKLKTHSESLQKQL 361
L ++ + L+ L
Sbjct: 582 ALQAMQDKNLMLENSL 597
Score = 33.7 bits (77), Expect = 1.1
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 21/191 (10%)
Query: 1202 TQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQ 1261
R+ EL + + + +L + DL + KE D +++ AK K Q MQ
Sbjct: 424 QARQNESELRNQISLLTSLERSLKSDLGQ----LKKENDMLQTKLNSMVSAKQKDKQSMQ 479
Query: 1262 AALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDE 1321
+ +EK L + A + E+ + K +E+E + + +
Sbjct: 480 S-MEKRLKSEADSRVNAEKQLAEEKKRKKEEEET----------------AARAAAQAAA 522
Query: 1322 EHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSE 1381
+ L+ + L+ E+ + ++ +E LE+ +L K QES +L S
Sbjct: 523 SREECAESLKQAKQDLEMEIKKLEHDLKLKEEECRMLEKEAQELRKYQESEKETEVLMSA 582
Query: 1382 LAEQRTLNQQL 1392
L + N L
Sbjct: 583 LQAMQDKNLML 593
>gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function
unknown].
Length = 652
Score = 41.6 bits (98), Expect = 0.004
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 457 EELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQL 516
EE ++ + E + + +T E L EE+ L+++L E K I KL+++L
Sbjct: 410 EEEERREITVYEKRIKKLEETVE----------RLEEENSELKRELEELKREIEKLESEL 459
Query: 517 EAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNS 576
E ++ D++++ R+ RIE L +E E + RVE+L + +++ + S
Sbjct: 460 ERFRREVRD-KVRKDREIRARDRRIERLEKELEEKKKRVEELER--KLAELRKMRKLELS 516
Query: 577 LDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQL 636
T EK L+ ++E +K+ VE G + D R +
Sbjct: 517 GKGTPVKVVEKLTLEAIEE--AEEEYGIKEGDVILVEDPSGGGARTAEELIDKKP-RAII 573
Query: 637 ESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKF 696
++ + E+ +NEI L + + L A V+ + L EE K+++E+ +
Sbjct: 574 RGEEMSHAAAEEFFKNEIPVLPEGDVQIIRLDEFAVVDSEELRRAIEEWKKRFEERERRQ 633
Query: 697 EN 698
+
Sbjct: 634 KE 635
Score = 41.2 bits (97), Expect = 0.006
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
Query: 104 LNEEVSQLKTKENELHSRIEELEDK--LQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQ 161
L E +S++K +E E E++ + K + +E E S+L L+
Sbjct: 390 LAEALSKVKEEERPREKEGTEEEERREITVYEKRIKKLEETVERLEEENSELKRELEELK 449
Query: 162 EEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
E++ L+ +L V + +KD I +E +EK L EK+ VEE
Sbjct: 450 REIEKLESELERFRREVRDK----------VRKDREIRARDRRIERLEKELEEKKKRVEE 499
Score = 39.3 bits (92), Expect = 0.021
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 21/202 (10%)
Query: 95 EDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQ---KIDDEKSVSYQLEEKAIEIS 151
+ E + L EE S+LK + EL IE+LE +L++ ++ D+ ++ + I
Sbjct: 425 KKLEETVERLEEENSELKRELEELKREIEKLESELERFRREVRDKVRKDREIRARDRRIE 484
Query: 152 QLTEHNRFLQEEMQSLKDKLRDL---------DENVTVEDIKKANESAIAKKDEVIEKLK 202
+L + ++ ++ L+ KL +L + V+ ++K AI + +E +
Sbjct: 485 RLEKELEEKKKRVEELERKLAELRKMRKLELSGKGTPVKVVEKLTLEAIEEAEEEYGIKE 544
Query: 203 AELESVEKALREKESEVEEWGNND------AWGASDDVKEELEKLVV-EKQEL-IEVIQN 254
++ VE EE + S EE K + E +++I+
Sbjct: 545 GDVILVEDPSGGGARTAEELIDKKPRAIIRGEEMSHAAAEEFFKNEIPVLPEGDVQIIRL 604
Query: 255 HETLIAKLEADLTRVKEEKEAE 276
E + E +L R EE +
Sbjct: 605 DEFAVVDSE-ELRRAIEEWKKR 625
Score = 37.4 bits (87), Expect = 0.075
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 509 ISKLKTQLEAAQQGTSSHSHPVDQQVQDR-----ESRIEMLSRENEGLRTRVEQLGLVIE 563
+SK+K + ++ + + V ++ E +E L EN L+ +E+L IE
Sbjct: 394 LSKVKEEERPREKEGTEEEERREITVYEKRIKKLEETVERLEEENSELKRELEELKREIE 453
Query: 564 NNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQ 623
E + + +K R D E+ + L+K+LE+ ++ + LE ++
Sbjct: 454 K-LESELERFRREVR-------DKVRKDREIRARDRRIERLEKELEEKKKRVEELERKLA 505
Query: 624 QLE 626
+L
Sbjct: 506 ELR 508
Score = 35.8 bits (83), Expect = 0.28
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 981 EELQALTETLK-QTSNTHEED-----RKILDEYKQRVQELDAKLAEEIASK--------- 1025
EE Q TLK S+ HE D K YK ++++++ KL E K
Sbjct: 325 EEKQEALRTLKISVSDDHERDALAAAYKAYLAYKPKLEKVERKLPELGIWKDVERIKALV 384
Query: 1026 ---TSIIQTLEIQVKELQ--DKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHE 1080
+ + L +E + +K + E+ Y ++ +LE+ RLE E ++ E
Sbjct: 385 IRGYPLAEALSKVKEEERPREKEGTEEEERREITVYEKRIKKLEETVERLEEENSELKRE 444
Query: 1081 FEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIAS 1140
E + L+++L+ + ++ ++E+ +++ LE E +E K+++E
Sbjct: 445 LEELKREIEKLESELERFRREVRDKVRKDREIRARDRRIERLEKELEEKKKRVEE----- 499
Query: 1141 NFLKNELQSLQD 1152
L+ +L L+
Sbjct: 500 --LERKLAELRK 509
Score = 34.7 bits (80), Expect = 0.50
Identities = 22/128 (17%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 1241 ATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEK--------EALELRTEDLEYKLQE 1292
L+E L K + +++ ++ E+ ++ E LE +L+ +L+E
Sbjct: 388 YPLAEALSKVKEEERPREKEGTEEEERREITVYEKRIKKLEETVERLEEENSELKRELEE 447
Query: 1293 KEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMK 1352
++ I++L + F + VR +E+R E L+ E+ ++ ++
Sbjct: 448 LKREIEKLESELERF-----RREVR-DKVRKDREIRARDRRIERLEKELEEKKKRVEELE 501
Query: 1353 ETITYLEQ 1360
+ L +
Sbjct: 502 RKLAELRK 509
Score = 32.4 bits (74), Expect = 2.8
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 36/153 (23%)
Query: 600 ENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHA 659
++ +++ + ++ EI E+ L E +E L E EL
Sbjct: 395 SKVKEEERPREKEGTEEEERREITVYEKRIKKLEETVER-----------LEEENSELKR 443
Query: 660 KLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKE 719
+L L + E+L+ + E+ + D V D I+ + E
Sbjct: 444 ELE--------------ELKREIEKLESELERFRREVR-----DKVRKDREIRARDRRIE 484
Query: 720 ELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNY 752
L + L+EK K E LE +L L
Sbjct: 485 RLEKELEEK------KKRVEELERKLAELRKMR 511
Score = 32.0 bits (73), Expect = 3.7
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 586 EKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLES-KDQVDD 644
+E E+TV + +L++ +E+ E+ L+ E+++L+ + L +LE + +V D
Sbjct: 409 TEEEERREITVYEKRIKKLEETVERLEEENSELKRELEELKREIEKLESELERFRREVRD 468
Query: 645 SIEK-----TLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKY 689
+ K I+ L +L + V + L+ K EL++
Sbjct: 469 KVRKDREIRARDRRIERLEKELEEKKKRVEE-------LERKLAELRKMR 511
Score = 31.6 bits (72), Expect = 4.5
Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 33/226 (14%)
Query: 434 TELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLRE 493
+ L E+ ELK + E LK+ + E+EL + + ++
Sbjct: 422 KRIKKLEETVERLEEENSELKRELEELKREIEKLESELERFRREVRDKVRKDREIRARDR 481
Query: 494 ESGLLRQKLSEQKVIISKLKTQLEAAQQ----GTSSHSHPVDQQVQDRESRIEMLSRE-- 547
L ++L E+K + +L+ +L ++ S PV + IE E
Sbjct: 482 RIERLEKELEEKKKRVEELERKLAELRKMRKLELSGKGTPVKVVEKLTLEAIEEAEEEYG 541
Query: 548 -------------NEGLRTRVEQLGLVIENNYVQE--SDPMNNSLDNT-----AQLTAEK 587
G RT E + E S + +
Sbjct: 542 IKEGDVILVEDPSGGGARTAEELIDKKPRAIIRGEEMSHAAAEEFFKNEIPVLPEGDVQI 601
Query: 588 ERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILR 633
RLDE V S+E L +A+E+ K EE ++ +++ ILR
Sbjct: 602 IRLDEFAVVDSEE-------LRRAIEEWKKRFEERERRQKEEDILR 640
Score = 31.6 bits (72), Expect = 4.6
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1484 EPAQEREVVAQHVAPVETSRERNELALR--LQNLQEEKTMLLTEINDLRLNQNTLYNENE 1541
E +E+E + T E+ L ++ L+EE + L E+ +L+ L +E E
Sbjct: 401 ERPREKEGTEEEERREITVYEKRIKKLEETVERLEEENSELKRELEELKREIEKLESELE 460
Query: 1542 RLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVK 1580
R ++ + + E+ ++ I+ L +L E ++RV+
Sbjct: 461 RFRREVRDKVRKDR-EIRARDRRIERLEKELEEKKKRVE 498
Score = 31.2 bits (71), Expect = 5.9
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 1229 NASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEY 1288
N+ ++ L+E + ++ + L+ + E + E A + R E LE
Sbjct: 438 NSELKRELEELKREIEKLESE-------LERFRR--EVRDKVRKDREIRARDRRIERLEK 488
Query: 1289 KLQEKEKMIQEL 1300
+L+EK+K ++EL
Sbjct: 489 ELEEKKKRVEEL 500
>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail. The myosin molecule is a
multi-subunit complex made up of two heavy chains and
four light chains it is a fundamental contractile
protein found in all eukaryote cell types. This family
consists of the coiled-coil myosin heavy chain tail
region. The coiled-coil is composed of the tail from two
molecules of myosin. These can then assemble into the
macromolecular thick filament. The coiled-coil region
provides the structural backbone the thick filament.
Length = 859
Score = 41.6 bits (98), Expect = 0.004
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 60/323 (18%)
Query: 100 KIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRF 159
K + ++ +++ K K +EL + ++ + + + + + +LEE ++ L N+
Sbjct: 378 KQKNFDKILAEWKRKVDELQAELDTAQREARNLSTELFRLKNELEELKDQVEALRRENKN 437
Query: 160 LQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEV 219
LQ+E+ L D+L + NV +++KA A+KDE L+A LE E AL +ES+V
Sbjct: 438 LQDEIHDLTDQLGEGGRNVH--ELEKARRRLEAEKDE----LQAALEEAEAALELEESKV 491
Query: 220 EEWGNNDAWGASDDVKEELEKLVVEKQELIEVI-QNHETLIAKLEADLTRVKEEKEAEVS 278
A ++ E+E+ + EK+E E +NH+ I L+A L EAE
Sbjct: 492 LR-----AQVELSQIRSEIERRLAEKEEEFENTRKNHQRAIESLQATL-------EAEAK 539
Query: 279 GKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKE 338
GK E + K+L+ + LE +L + K N E ++
Sbjct: 540 GKAEASRLKKKLEGDINELEIAL-------------------------DHANKANAEAQK 574
Query: 339 KLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKV 398
+ K + + +L+T E Q+ + ++LA ++ L ++
Sbjct: 575 NVKKYQQQVKELQTQVEEEQRAREDAR----------------EQLAVAERRATALEAEL 618
Query: 399 SELQTQLLSVEEALKKKENDLED 421
EL++ L E A K+ E +L +
Sbjct: 619 EELRSALEQAERARKQAETELAE 641
Score = 36.9 bits (86), Expect = 0.12
Identities = 156/753 (20%), Positives = 298/753 (39%), Gaps = 120/753 (15%)
Query: 117 ELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDE 176
EL + ELE++L +K + +S +LE++ ++Q LQ++++ L+ ++R+L+E
Sbjct: 1 ELERQKRELENQLYRKESELSQLSSKLEDEQALVAQ-------LQKKIKELEARIRELEE 53
Query: 177 NVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKE 236
+ E +A EKA + E+EE + E
Sbjct: 54 ELEAE--------------------RAARAKAEKARADLSRELEE------------LSE 81
Query: 237 ELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSG-KLEQDAMVKELKSKVE 295
LE+ IE+ + E +AKL DL + E ++ + + + EL ++E
Sbjct: 82 RLEEAGGATAAQIELNKKREAELAKLRKDLEEANLQHEEALATLRKKHQDAINELSEQIE 141
Query: 296 TLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSE 355
L+ K K ++ + + I K E+ ++L ES L++L+ +
Sbjct: 142 QLQ-KQKAKAEKEKSQLQAEVDDLLAQLDQIAKAKLNAEKKAKQL---ESQLSELQVKLD 197
Query: 356 SLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKK 415
LQ+QL + + + LQ EN L ++ E + Q+ ++ + +
Sbjct: 198 ELQRQLNDL----------------TSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKSQL 241
Query: 416 ENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEW- 474
E+ LE+ + S E NL+A+ + E + L+ Q E +A + E +LS+
Sbjct: 242 ESQLEEAKRSLE---EESRERANLQAQLRQLEHDLDSLREQLEEESEAKAELERQLSKAN 298
Query: 475 GQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQV 534
+ +W S S+ EE L++KL+++ IS+L+ EAA S +++
Sbjct: 299 AEIQQWRSKFESEGALRAEELEELKKKLNQK---ISELEEAAEAANAKCDS----LEKTK 351
Query: 535 QDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEV 594
+S +E L E E +L E + +L AE + E
Sbjct: 352 SRLQSELEDLQIELERANAAASEL----EKKQKNFDKILAEWKRKVDELQAELDTAQREA 407
Query: 595 TVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLR--- 651
LS E LK +LE+ ++ + L E + L+++ L +QL + +EK R
Sbjct: 408 RNLSTELFRLKNELEELKDQVEALRRENKNLQDEIHDLTDQLGEGGRNVHELEKARRRLE 467
Query: 652 NEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLI 711
E EL A L EA + + + + +++ + E
Sbjct: 468 AEKDELQAALEEAEAALELEESKVLRAQVELSQIRSEIE--------------------- 506
Query: 712 KNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKIS 771
+ L K+EE +NT N + E+L+ L+ + + K LE I+
Sbjct: 507 RRLAEKEEEF------ENTRKNHQRAIESLQATLEAEAKGKAE----ASRLKKKLEGDIN 556
Query: 772 ELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIE 831
EL A + N + K + +++ LQ + + +R ++ E +
Sbjct: 557 ELEIALDHANKANAEAQKNVKKYQQQVKELQTQVEEEQRAREDAR-----------EQLA 605
Query: 832 ASNHKIQQLTQETDTLKAELVAQAESTQLVKQE 864
+ + L E + L++ L + + + E
Sbjct: 606 VAERRATALEAELEELRSALEQAERARKQAETE 638
Score = 36.9 bits (86), Expect = 0.12
Identities = 142/634 (22%), Positives = 256/634 (40%), Gaps = 74/634 (11%)
Query: 108 VSQLKTKENELHSRIEELEDKLQ------QKIDDEKS--------VSYQLEEKAIEISQL 153
V+QL+ K EL +RI ELE++L+ K + ++ +S +LEE +
Sbjct: 34 VAQLQKKIKELEARIRELEEELEAERAARAKAEKARADLSRELEELSERLEEAGGATAAQ 93
Query: 154 TEHNRFLQEEMQSLKDKLRD--LDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKA 211
E N+ + E+ L+ L + L + ++K ++ AI + E IE+L+ + EK
Sbjct: 94 IELNKKREAELAKLRKDLEEANLQHEEALATLRKKHQDAINELSEQIEQLQKQKAKAEKE 153
Query: 212 LREKESEVEEW-----GNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEA-- 264
+ ++EV++ A ++ ++LE + E Q ++ +Q + ++
Sbjct: 154 KSQLQAEVDDLLAQLDQIAKAKLNAEKKAKQLESQLSELQVKLDELQRQLNDLTSQKSRL 213
Query: 265 -----DLTRVKEEKEAEVS----GKLEQDAMVKELKSKVE-------TLEASLKQKEQEL 308
DLTR EE EA+VS K + ++ ++E K +E L+A L+Q E +L
Sbjct: 214 QSENSDLTRQLEEAEAQVSNLSKLKSQLESQLEEAKRSLEEESRERANLQAQLRQLEHDL 273
Query: 309 EGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMEL 368
+ + S + L K N EI++ +K ES A E L+K+L +K EL
Sbjct: 274 DSLREQLEEESEAKAELERQLSKANAEIQQWRSKFESEGALRAEELEELKKKLNQKISEL 333
Query: 369 EEWGNNDSWGGDNDKL----ATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGE 424
EE ++ D L + LQ E + L ++ +E+ K + L +W
Sbjct: 334 EE--AAEAANAKCDSLEKTKSRLQSELEDLQIELERANAAASELEKKQKNFDKILAEWKR 391
Query: 425 GDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPS 484
D EL+ + + + LK++ E LK + E +
Sbjct: 392 KVDELQ---AELDTAQREARNLSTELFRLKNELEELKDQVEALRRENKNLQDEIHDLTDQ 448
Query: 485 SSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIE-- 542
+ E R++L +K + + EAA + S ++ S IE
Sbjct: 449 LGEGGRNVHELEKARRRLEAEKDELQAALEEAEAALELEESKVLRAQVELSQIRSEIERR 508
Query: 543 MLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKER-----------LD 591
+ +E E TR N+ + + + +L+ A+ AE R L+
Sbjct: 509 LAEKEEEFENTR---------KNHQRAIESLQATLEAEAKGKAEASRLKKKLEGDINELE 559
Query: 592 EEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLR 651
+ ++ N E +K V+K + +E+Q E+ RE + V + L
Sbjct: 560 IALDHANKANAEAQKN----VKKYQQQVKELQTQVEEEQRAREDAREQLAVAERRATALE 615
Query: 652 NEIQELHAKLINVEALVNQAQVEKQALDGKYEEL 685
E++EL + L E QA+ E + EL
Sbjct: 616 AELEELRSALEQAERARKQAETELAEASERVNEL 649
Score = 35.4 bits (82), Expect = 0.37
Identities = 144/690 (20%), Positives = 280/690 (40%), Gaps = 117/690 (16%)
Query: 1063 LEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTL 1122
L++ +A+ E E++Q E + DL QLD E++ ++++Q+ L
Sbjct: 143 LQKQKAKAEKEKSQLQAEVD-------DLLAQLDQIAKA---KLNAEKKAKQLESQLSEL 192
Query: 1123 EYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQL 1182
+ + EL +Q+ + + + L++E L ++ + L + K LE+QL
Sbjct: 193 QVKLDELQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQV-------SNLSKLKSQLESQL 245
Query: 1183 KELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDAT 1242
E+ +R L EE R L A + + + D+
Sbjct: 246 -----------------EEAKRSLEEESRERAN------------LQAQLRQLEHDLDSL 276
Query: 1243 LSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNE 1302
++ ++SEAK + +++ A + + +FE E LR E+LE + K+K+ Q+++E
Sbjct: 277 REQLEEESEAKAELERQLSKANAEIQQWRSKFESEGA-LRAEELE---ELKKKLNQKISE 332
Query: 1303 MKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYN 1362
+++ +SL+ R +E+++++ +
Sbjct: 333 LEE--------------------AAEAANAKCDSLEKTKSRLQSELEDLQIELERANAAA 372
Query: 1363 LQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELP 1422
+L K Q++ LAE + +L ++T E+ N E+ RL L E
Sbjct: 373 SELEKKQKN------FDKILAEWKRKVDELQAELDTAQREARNLSTELFRLKNELEELKD 426
Query: 1423 KLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLE-EVTQLMSSNDRPEA 1481
+++ L + L+ ++ ++ L R + E L A+ +LE E +L ++ + EA
Sbjct: 427 QVEALRRENKNLQDEIHDLTDQLGEGGRNVHE----LEKARRRLEAEKDELQAALEEAEA 482
Query: 1482 DGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENE 1541
E + + + AQ VE S+ R+E+ RL +EE +
Sbjct: 483 ALELEESKVLRAQ----VELSQIRSEIERRLAEKEEEFENTRKNHQRAIESLQATLEAEA 538
Query: 1542 RLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALT 1601
+ K + ++ K E I +L + L + + + A + QQV+ L
Sbjct: 539 KGKAEASRLKK-------KLEGDINELEIAL-DHANKANAEAQKNVK---KYQQQVKELQ 587
Query: 1602 SQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIA-QSLEFLQGE 1660
+QV+ +E +E+L AE +A L L+ LE QAE+ + A L
Sbjct: 588 TQVEEEQRAREDAREQLAVAERRATALEAELEELRSALE--QAERARKQAETELAEASER 645
Query: 1661 LNNSYAKNNELT-------QLISTLQHQLQE-----------ARESLSAAGRLSDQLNQK 1702
+N A+N+ L ++ LQ L E A+++ + A RL+++L Q+
Sbjct: 646 VNELTAQNSSLIAQKRKLEGELAALQSDLDEAVNELKAAEERAKKAQADAARLAEELRQE 705
Query: 1703 SQTIQELTEKVNQLMEELNKKEAKLKEVNN 1732
+ Q L QL ++ + + +L E
Sbjct: 706 QEHSQHLERLRKQLESQVKELQVRLDEAEA 735
Score = 35.0 bits (81), Expect = 0.48
Identities = 123/602 (20%), Positives = 247/602 (41%), Gaps = 81/602 (13%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
EL +++ ++ L + S+L+++ ++L ++EE E ++ + + QLEE
Sbjct: 191 ELQVKLDELQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKSQLESQLEEAKR 250
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESV 208
+ + + LQ +++ L+ L L E + E KA +
Sbjct: 251 SLEEESRERANLQAQLRQLEHDLDSLREQLEEESEAKAE--------------------L 290
Query: 209 EKALREKESEVEEW---GNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEAD 265
E+ L + +E+++W ++ +++++E +KL + EL E + LE
Sbjct: 291 ERQLSKANAEIQQWRSKFESEGALRAEELEELKKKLNQKISELEEAAEAANAKCDSLEKT 350
Query: 266 LTRVKEEKEAEVSGKLEQDAMVKELKSKVETLE---ASLKQKEQELEGWTDNDNWGSSGN 322
+R++ E E +A EL+ K + + A K+K EL
Sbjct: 351 KSRLQSELEDLQIELERANAAASELEKKQKNFDKILAEWKRKVDEL-------------- 396
Query: 323 EQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDND 382
+ +++ ++E + +L + ++ L +LK E+L+++ K ++ E D G
Sbjct: 397 QAELDTAQREARNLSTELFRLKNELEELKDQVEALRRE--NKNLQDEIHDLTDQLGEGGR 454
Query: 383 KLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAK 442
+ L++ + L + ELQ L E AL+ +E+ EL+ +R
Sbjct: 455 NVHELEKARRRLEAEKDELQAALEEAEAALELEESK----------VLRAQVELSQIR-- 502
Query: 443 CSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPS--------SSDLNTLREE 494
SE E+ + E + + E ++ L + G D+N L
Sbjct: 503 -SEIERRLAEKEEEFENTRKNHQRAIESLQATLEAEAKGKAEASRLKKKLEGDINELEIA 561
Query: 495 -SGLLRQKLSEQKVI------ISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRE 547
+ QK + + +L+TQ+E Q+ +Q+ E R L E
Sbjct: 562 LDHANKANAEAQKNVKKYQQQVKELQTQVEEEQR----AREDAREQLAVAERRATALEAE 617
Query: 548 NEGLRTRVEQLGL---VIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIEL 604
E LR+ +EQ E + S+ +N + L A+K +L+ E+ L + E
Sbjct: 618 LEELRSALEQAERARKQAETELAEASERVNELTAQNSSLIAQKRKLEGELAALQSDLDEA 677
Query: 605 KKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINV 664
+L+ A E+ K + + +L E+ LR++ E + + + K L ++++EL +L
Sbjct: 678 VNELKAAEERAKKAQADAARLAEE---LRQEQEHSQHL-ERLRKQLESQVKELQVRLDEA 733
Query: 665 EA 666
EA
Sbjct: 734 EA 735
>gnl|CDD|178768 PLN03229, PLN03229, acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha; Provisional.
Length = 762
Score = 41.4 bits (97), Expect = 0.005
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 56/302 (18%)
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
E++ L EE S+ +++ +H + E +KL+ + + +L+
Sbjct: 486 ERLENLREEFSKANSQDQLMHPVLMEKIEKLKDEFN----------------KRLSRAPN 529
Query: 159 FLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREK--- 215
+L SLK KL L+E + + + A K E+ +K K ++ E ++EK
Sbjct: 530 YL-----SLKYKLDMLNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRPE--IKEKMEA 582
Query: 216 -ESEVEEWGNNDAWGASDDVKEELEKLVVEKQ-ELIEVIQ------------NHETLIAK 261
++EV G + DD+KE++EK+ E + EL V++ N +T
Sbjct: 583 LKAEVASSGASSGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDTAEQT 642
Query: 262 LEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSG 321
+L E E++ K+E+ +LKSK+E L+ + + +
Sbjct: 643 PPPNLQEKIESLNEEINKKIERVIRSSDLKSKIELLKLEVAKA-------------SKTP 689
Query: 322 NEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDN 381
+ + E ++ ++IK+K+A+ ++ LK E L+ +L +N S D+
Sbjct: 690 DVTEKEKIEALEQQIKQKIAEALNSSE-LKEKFEELEAEL--AAARETAAESNGSLKNDD 746
Query: 382 DK 383
DK
Sbjct: 747 DK 748
>gnl|CDD|225747 COG3206, GumC, Uncharacterized protein involved in
exopolysaccharide biosynthesis [Cell envelope
biogenesis, outer membrane].
Length = 458
Score = 41.3 bits (97), Expect = 0.005
Identities = 41/242 (16%), Positives = 99/242 (40%), Gaps = 21/242 (8%)
Query: 458 ELLKQALIDKENE--LSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQ 515
L QA + + E L + + ++ +L +E+ + Q + + Q
Sbjct: 175 NALAQAYLADQLEAQLEAFRRASDSLDERLEELRARLQEAEAQVEDFRAQHGLTDAARGQ 234
Query: 516 LEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNN 575
L + QQ ++ ++ Q+Q +R L++ L + ++ L L E
Sbjct: 235 LLSEQQLSA-----LNTQLQSARAR---LAQAEARLASLLQLLPLGREA-------AALR 279
Query: 576 SLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQ 635
+ + + +++ + ++ + EL K Q V + L E QQ+ + +
Sbjct: 280 EVLESPTIQDLRQQYAQVRQQIADLSTELGAKHPQLVALEAQLAELRQQIAAELRQILAS 339
Query: 636 LESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEK 695
L ++ + + E L E+ +L +L + + + QV+ + L+ + E + YE + ++
Sbjct: 340 LPNELALLEQQEAALEKELAQLKGRL----SKLPKLQVQLRELEREAEAARSLYETLLQR 395
Query: 696 FE 697
++
Sbjct: 396 YQ 397
Score = 36.3 bits (84), Expect = 0.17
Identities = 52/263 (19%), Positives = 95/263 (36%), Gaps = 32/263 (12%)
Query: 969 VQAENISIKQMNEELQALTETLKQTSN----THEEDRKILDEYKQRVQELDAKLAEEIAS 1024
A ++ + ++L+A E ++ S+ EE R L E + +V++ A+ A+
Sbjct: 172 KLANALAQAYLADQLEAQLEAFRRASDSLDERLEELRARLQEAEAQVEDFRAQHGLTDAA 231
Query: 1025 KTSI--IQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFE 1082
+ + Q L +LQ E L + + A E +
Sbjct: 232 RGQLLSEQQLSALNTQLQSARARLAQAEARLASLLQLLPLGREAAALREVLESP------ 285
Query: 1083 VKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNF 1142
T+ DL+ Q Y A + ELG Q+ LE + EL +QI E
Sbjct: 286 ----TIQDLRQQ---YAQVRQQIADLSTELGAKHPQLVALEAQLAELRQQIAAE------ 332
Query: 1143 LKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDT 1202
L+ L SL ++ A L ++ L + L+ +L +L + Q ++++ E
Sbjct: 333 LRQILASL-------PNELALLEQQEAALEKELAQLKGRLSKLPKLQVQLRELEREAEAA 385
Query: 1203 QRKLNEELARRDATIATLNTTGA 1225
+ L R +
Sbjct: 386 RSLYETLLQRYQELSIQEASPIG 408
Score = 32.0 bits (73), Expect = 2.9
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 12/143 (8%)
Query: 1596 QVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLE 1655
Q+EA SL E+ E+L+ +L +AE V+ +A A Q L
Sbjct: 189 QLEAFRRASDSLDERLEELRARLQEAEAQVEDFRAQHG------LTDAARGQLLSEQQLS 242
Query: 1656 FLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQ 1715
L +L ++ A L Q + L L + A L + L S TIQ+L ++ Q
Sbjct: 243 ALNTQLQSARA---RLAQAEARLA-SLLQLLPLGREAAALREVLE--SPTIQDLRQQYAQ 296
Query: 1716 LMEELNKKEAKLKEVNNGGKVDK 1738
+ +++ +L + +
Sbjct: 297 VRQQIADLSTELGAKHPQLVALE 319
Score = 30.9 bits (70), Expect = 7.1
Identities = 47/265 (17%), Positives = 89/265 (33%), Gaps = 34/265 (12%)
Query: 490 TLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENE 549
+ L KL+ L QLEA + S +D+++++ +R++ + E
Sbjct: 161 SYTSNDPKLAAKLANALAQA-YLADQLEAQLEAFRRASDSLDERLEELRARLQEAEAQVE 219
Query: 550 GLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLE 609
Q GL S+ QL + + RL + L+ L E
Sbjct: 220 ---DFRAQHGLTDAARGQLLSE--QQLSALNTQLQSARARLAQAEARLASLLQLLPLGRE 274
Query: 610 QAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVN 669
A ++ IQ L R+Q Q + L AK + AL
Sbjct: 275 AAALREVLESPTIQDL-------RQQYAQVRQQIADLSTELG-------AKHPQLVALEA 320
Query: 670 QAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKN 729
Q +Q Q++ + ++ L + + ++EL +L +
Sbjct: 321 QLAELRQ--------------QIAAELRQILASLPNELALLEQQEAALEKELAQLKGRLS 366
Query: 730 TLDNIKVEKENLEIQLDNLNTNYQD 754
L ++V+ LE + + + Y+
Sbjct: 367 KLPKLQVQLRELEREAEAARSLYET 391
>gnl|CDD|224428 COG1511, COG1511, Predicted membrane protein [Function unknown].
Length = 780
Score = 41.3 bits (97), Expect = 0.005
Identities = 65/398 (16%), Positives = 136/398 (34%), Gaps = 34/398 (8%)
Query: 1364 QLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEE--- 1420
+ ++ L+ E N++L ++NT + S + + L L+
Sbjct: 176 LGGGVKGAADGAEKLKDGTDEASNGNKKLSDLLNTLNNSSATFSDGLNALTSGLTTLTDG 235
Query: 1421 LPKLKDLGGQVATLEKQLKTTSETLA-------TKERQLAETKEQLSLAQSQLEEVTQLM 1473
L +L G +A +LK +E L + +L + L+ QL + +
Sbjct: 236 LNQLDSGLGTLAAGIGELKQGAEQLNEGIGEFSSGLSELNSGVQDLAAGVPQLNQGISAL 295
Query: 1474 SSN-DRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTML-LTEINDLRL 1531
++ P++ G+ + +A + + L +L ++ML L++ DL
Sbjct: 296 AAGLSLPDSLGDQFSSLQEALTQIAQGLKQKTSSSLEAAQGSLSSLQSMLALSKSLDLTA 355
Query: 1532 NQNTLYNENERLKQH----LLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYT 1587
T+ KT + L + + L +A ++ S
Sbjct: 356 EGATVDALGAPDGVQWLDESQKTLATLSELLSTGIDGVSEGLDALEQASAQLAKSLAKLK 415
Query: 1588 SASVRSNQQVEALTSQVK------SLTEQKEKLQEKLYQAEDVVQK-HQASLTNLQIVLE 1640
+A Q+ A +Q+ T + + L + L Q + K A + L +
Sbjct: 416 TA----VAQIAASIAQLLPGASEVLKTLKSKGLDKLLNQLNGALAKGSNALVQGLSDAND 471
Query: 1641 QFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLN 1700
F++ ++ L L +N+L+ L L ++ L+
Sbjct: 472 SFRSITSAQLKAGLNTLA-------DGSNDLSSLGPGLGQLADGSKLLADGLSELNTGSA 524
Query: 1701 QKSQTIQELTEKVNQLMEELNKKEAKLKEVNNGGKVDK 1738
Q + EL++ + +L + L +L N+ K
Sbjct: 525 QLRDGLGELSDGLTELADSLQDAADQLSLANDSDKQAS 562
Score = 37.9 bits (88), Expect = 0.067
Identities = 54/330 (16%), Positives = 95/330 (28%), Gaps = 34/330 (10%)
Query: 724 LLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNE 783
L D NTL+N + L + T D +N L L A I EL N
Sbjct: 204 LSDLLNTLNNSSATFSDGLNALTSGLTTLTDGLNQLDSGLGTLAAGIGELKQGAEQLNEG 263
Query: 784 INDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQE 843
I + + +S L + L L S + + + Q+ Q
Sbjct: 264 IGEFSSGLSELNSGVQDLAAGVPQL-NQGISALAAGLSLPDSLGDQFSSLQEALTQIAQG 322
Query: 844 TDTLKAELVAQAESTQLVKQEQALLA------AAPVDDNIVIENQQLKQNLESVKQENTL 897
+ + A+ + Q L+ A + + ++ ES K TL
Sbjct: 323 LKQKTSSSLEAAQGSLSSLQSMLALSKSLDLTAEGATVDALGAPDGVQWLDESQKTLATL 382
Query: 898 VVENLQNLIAQKD------YEINAKVTELSIIMEKCKQYEDKCIELE---STLDAKLTDF 948
+ + L+ + Q +L S + L
Sbjct: 383 SELLSTGIDGVSEGLDALEQASAQLAKSLAKLKTAVAQIAASIAQLLPGASEVLKTLKSK 442
Query: 949 STKE---QLNKNKMAELSAMLESVQAENIS---------------IKQMNEELQALTETL 990
+ QLN +A+++ + N S + + +L +L L
Sbjct: 443 GLDKLLNQLNGALAKGSNALVQGLSDANDSFRSITSAQLKAGLNTLADGSNDLSSLGPGL 502
Query: 991 KQTSNTHEEDRKILDEYKQRVQELDAKLAE 1020
Q ++ + L E +L L E
Sbjct: 503 GQLADGSKLLADGLSELNTGSAQLRDGLGE 532
Score = 37.9 bits (88), Expect = 0.067
Identities = 43/276 (15%), Positives = 83/276 (30%), Gaps = 27/276 (9%)
Query: 1589 ASVRSNQQVEALTSQV-KSLTEQK---------EKLQEKLYQAEDVVQKHQASLTNLQIV 1638
A + + + L +++ K LTE L + A D +K +
Sbjct: 141 APKITEKAADKLLNEISKELTETYTKVVAFPTIYDLGGGVKGAADGAEKLKDGTDEASNG 200
Query: 1639 LEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQ 1698
++ ++ N + S LN LT ++TL L + L +
Sbjct: 201 NKK-LSDLLNTLNNSSATFSDGLNA-------LTSGLTTLTDGLNQLDSGLGTLAAGIGE 252
Query: 1699 LNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNNGGKVDKCLVTNMIVNFLTAPSRP-SR 1757
L Q ++ + E + + + ELN ++++ G + I S P S
Sbjct: 253 LKQGAEQLNEGIGEFSSGLSELNS---GVQDLAAGVPQ----LNQGISALAAGLSLPDSL 305
Query: 1758 HQALQILASVIDMTPQDRQKIGLEPSQAFNPNQSLSEAFIQFLESESSPRSKAQSSTPVS 1817
L + Q ++ +A + S ++ + +S A +
Sbjct: 306 GDQFSSLQEALTQIAQGLKQKTSSSLEAAQGSLSSLQSMLALSKSLDLTAEGATVDALGA 365
Query: 1818 RRTSSTTSPLLFPESALPSLPQFSTMGSGSMLKDVL 1853
+ L L G S D L
Sbjct: 366 PDGVQWLDESQKTLATLSELLSTGIDGV-SEGLDAL 400
Score = 35.9 bits (83), Expect = 0.23
Identities = 45/243 (18%), Positives = 79/243 (32%), Gaps = 20/243 (8%)
Query: 1 MQTDKEEPSPVTPSADNAMQTDPELPLPLEPCQTTGSDNSDEISEAYDMLQNEYDDLKQK 60
D D + +T L L S+ D + +A L LK
Sbjct: 358 ATVDALGAPDGVQWLDESQKTLATLSELLSTGIDGVSEGLDALEQASAQLAKSLAKLKTA 417
Query: 61 FDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNV---------------EDYNEKIRALN 105
++ +EV T + +L+ + D N+ R++
Sbjct: 418 VAQIAASIAQLLPGASEVLKTLKSKGLDKLLNQLNGALAKGSNALVQGLSDANDSFRSIT 477
Query: 106 EEVSQLKTKENELHSRIEELEDK---LQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQE 162
+QLK N L +L L Q D K ++ L E +QL + L +
Sbjct: 478 S--AQLKAGLNTLADGSNDLSSLGPGLGQLADGSKLLADGLSELNTGSAQLRDGLGELSD 535
Query: 163 EMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEW 222
+ L D L+D + +++ + S IA E+ EK + + L + + W
Sbjct: 536 GLTELADSLQDAADQLSLANDSDKQASFIANPVELKEKDIDPVPNYGSGLAPFYTALALW 595
Query: 223 GNN 225
Sbjct: 596 VGA 598
>gnl|CDD|130902 TIGR01843, type_I_hlyD, type I secretion membrane fusion protein,
HlyD family. Type I secretion is an ABC transport
process that exports proteins, without cleavage of any
signal sequence, from the cytosol to extracellular medium
across both inner and outer membranes. The secretion
signal is found in the C-terminus of the transported
protein. This model represents the adaptor protein
between the ATP-binding cassette (ABC) protein of the
inner membrane and the outer membrane protein, and is
called the membrane fusion protein. This model selects a
subfamily closely related to HlyD; it is defined narrowly
and excludes, for example, colicin V secretion protein
CvaA and multidrug efflux proteins [Protein fate, Protein
and peptide secretion and trafficking].
Length = 423
Score = 40.8 bits (96), Expect = 0.006
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 1402 ESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSL 1461
+ + ++L EL K GQ + E + T L Q+ + + +L+
Sbjct: 108 AAIEFPDDLLSAEDPAVPELIK-----GQQSLFESRKSTLRAQLELILAQIKQLEAELAG 162
Query: 1462 AQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTM 1521
Q+QL+ + Q + +E+ +V+ + +E RER E L L+ E +
Sbjct: 163 LQAQLQALRQQLEVISEELEARRKLKEKGLVS-RLELLELERERAEAQGELGRLEAELEV 221
Query: 1522 LLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVK 1580
L +I++L+L + + ++ +L+ EL +A+ + +L +L +A +R++
Sbjct: 222 LKRQIDELQLERQQIEQ---TFREEVLE-------ELTEAQARLAELRERLNKARDRLQ 270
Score = 36.1 bits (84), Expect = 0.19
Identities = 28/143 (19%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 1580 KSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVL 1639
+S + + Q++ L +++ L Q + L+++L + ++ + L +V
Sbjct: 136 ESRKSTLRAQLELILAQIKQLEAELAGLQAQLQALRQQLEVISEELEA-RRKLKEKGLVS 194
Query: 1640 EQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQL 1699
E + E A+ QGEL A+ L + I LQ + Q+ ++ + ++L
Sbjct: 195 RLELLELERERAE----AQGELGRLEAELEVLKRQIDELQLERQQIEQTFRE--EVLEEL 248
Query: 1700 NQKSQTIQELTEKVNQLMEELNK 1722
+ + EL E++N+ + L +
Sbjct: 249 TEAQARLAELRERLNKARDRLQR 271
Score = 35.8 bits (83), Expect = 0.22
Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 25/211 (11%)
Query: 1269 SEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELR 1328
++ + E + L L E + + + E + S + ++
Sbjct: 81 ADAAELESQVLRLEAEVARLRAEADSQAAIEFPDDLLSAEDPAVPELIKGQQSLFESRKS 140
Query: 1329 ELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTL 1388
L+ E + ++ + E+ ++ + L Q L ++ EL +R L
Sbjct: 141 TLRAQLELILAQIKQLEAELAGLQAQLQALRQ-------------QLEVISEELEARRKL 187
Query: 1389 N-QQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLAT 1447
+ LV + E +E G L +L+ L Q+ L+ + +
Sbjct: 188 KEKGLVSRLELLELE-----RERAEAQGELGRLEAELEVLKRQIDELQLERQQ------I 236
Query: 1448 KERQLAETKEQLSLAQSQLEEVTQLMSSNDR 1478
++ E E+L+ AQ++L E+ + ++
Sbjct: 237 EQTFREEVLEELTEAQARLAELRERLNKARD 267
Score = 31.9 bits (73), Expect = 3.9
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 16/143 (11%)
Query: 284 DAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQ 343
++ L++++E + A +KQ E EL G Q +E + +E E + KL ++
Sbjct: 136 ESRKSTLRAQLELILAQIKQLEAELAGLQAQLQ----ALRQQLEVISEE-LEARRKLKEK 190
Query: 344 ----ESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNE--- 396
L +L+ Q +L E ELE D +L Q E E
Sbjct: 191 GLVSRLELLELERERAEAQGELGRLEAELEVLKR----QIDELQLERQQIEQTFREEVLE 246
Query: 397 KVSELQTQLLSVEEALKKKENDL 419
+++E Q +L + E L K + L
Sbjct: 247 ELTEAQARLAELRERLNKARDRL 269
Score = 31.5 bits (72), Expect = 4.2
Identities = 25/153 (16%), Positives = 62/153 (40%), Gaps = 17/153 (11%)
Query: 960 AELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLA 1019
+ + +++A+ I ++L+A L+ + +++ E ++
Sbjct: 133 SLFESRKSTLRAQLELILAQIKQLEAELAGLQAQLQALRQQLEVISE---ELEARRKLKE 189
Query: 1020 EEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIH 1079
+ + S+ +++ EL+ + + ELG+ +++ L++ L+ ER Q
Sbjct: 190 KGLVSR--------LELLELERERAEA---QGELGRLEAELEVLKRQIDELQLERQQIEQ 238
Query: 1080 EF--EVKTNTLSDLQTQLDTYNAKITHAALVEQ 1110
F EV L++ Q +L ++ A Q
Sbjct: 239 TFREEVLEE-LTEAQARLAELRERLNKARDRLQ 270
>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups.
Length = 977
Score = 41.0 bits (96), Expect = 0.007
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 234 VKEELEKLVVEKQELIEVIQNHETLI-----AKLEA--DLTRVKEEKEAEVSGKL----- 281
K+ + + ++L+ +IQN E I A+L+A DL ++ EKEA + GK+
Sbjct: 119 SKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEA-LQGKINILEM 177
Query: 282 ---EQDAMVK---ELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEE 335
E DA +K + K VE LE L++ EL + ++++ LK+EN
Sbjct: 178 RLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENML 237
Query: 336 IKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNND------SWGGDNDKLATLQQ 389
+K+ + ++ L ++ E + K LEKE L + + D KL+ LQ
Sbjct: 238 LKDDIQFLKAELIEVAETEERVFK--LEKERSLLDASLRELESKFIVAQEDVSKLSPLQY 295
Query: 390 ENKVLNEKVSELQTQL 405
+ EKV LQ L
Sbjct: 296 D--CWWEKVENLQDLL 309
Score = 39.1 bits (91), Expect = 0.024
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 32/276 (11%)
Query: 784 INDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNE-NIEASNHKIQQLTQ 842
I + K I L N A LQ ++ DLE+ L EK E + +I+ E + ++ +I+ Q
Sbjct: 137 IQNAEKNILLL--NQARLQ-ALEDLEKILTEK--EALQGKINILEMRLSETDARIKLAAQ 191
Query: 843 ETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENL 902
E + E++ + QL K LL + V L + L+ +K+EN L+ +++
Sbjct: 192 EK--IHVEILEE----QLEKLRNELLIRGATEGLCV---HSLSKELDVLKEENMLLKDDI 242
Query: 903 QNLIAQKDYEINAKVTELSIIM--EKCKQYEDKCIELESTLDAKLTDFSTKEQLNKN--- 957
Q L K I TE + ++ + ELES D S L +
Sbjct: 243 QFL---KAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWW 299
Query: 958 -KMAELSAMLESV--QAEN-ISIKQMNEELQ----ALTETLKQTSNTHEEDRKILDEYKQ 1009
K+ L +L+ Q E + N++L+ L +LK+ N + ++ +Q
Sbjct: 300 EKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEA-NVSKFSSYKVELLQQ 358
Query: 1010 RVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRS 1045
+++ L+ +L S IQ + +KE QD L
Sbjct: 359 KLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSK 394
Score = 39.1 bits (91), Expect = 0.030
Identities = 74/370 (20%), Positives = 154/370 (41%), Gaps = 41/370 (11%)
Query: 1363 LQLSKSQESSTTLTLLQS--ELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEE 1420
LQ + + T L++ EL ++ T + + + E+ + N E+
Sbjct: 65 LQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQ 124
Query: 1421 LP--KLKDLGGQVATLEKQL----KTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMS 1474
L +L+DL G + EK + + + L E+ L E KE L + LE +L
Sbjct: 125 LSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTE-KEALQGKINILE--MRLSE 181
Query: 1475 SNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQN 1534
++ R + + E++ + + + RNEL +R L E++ L+
Sbjct: 182 TDARIKLAAQEKIHVEILEEQL-----EKLRNELLIRGATEGLCVHSLSKELDVLKEENM 236
Query: 1535 TLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSN 1594
L ++ + LK L++ E + K E+ L LRE E + + + S
Sbjct: 237 LLKDDIQFLKAELIEVAETEER-VFKLEKERSLLDASLRELESKFIVAQEDVSKLSPL-- 293
Query: 1595 QQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSL 1654
Q + +V++L + ++ ++ +A V+ ++Q +L+ +K +++ SL
Sbjct: 294 -QYDCWWEKVENLQDLLDRATNQVEKAALVLDQNQ----DLR--------DKVDKLEASL 340
Query: 1655 EFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGR-LSDQLNQKSQTIQELTEKV 1713
+ N ++ +L LQ +L+ E L A+ + + ++I+E + +
Sbjct: 341 -----KEANVSKFSSYKVEL---LQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTL 392
Query: 1714 NQLMEELNKK 1723
++L EE K+
Sbjct: 393 SKLKEESKKR 402
Score = 38.7 bits (90), Expect = 0.039
Identities = 75/351 (21%), Positives = 140/351 (39%), Gaps = 47/351 (13%)
Query: 495 SGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHP-------VDQQVQDRESRIEMLSRE 547
S L ++ + L+T +E Q+ TSS + +
Sbjct: 63 SKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDG 122
Query: 548 NEGLRTRVEQLGLVIEN---NYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIEL 604
+ ++E L +I+N N + + +L++ ++ EKE L ++ +L E
Sbjct: 123 EQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSET 182
Query: 605 KKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEK----------TLRNEI 654
+++ A +++ +E +QLE+ + L + ++ S+ K L+++I
Sbjct: 183 DARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDI 242
Query: 655 QELHAKLINV---EALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTL- 710
Q L A+LI V E V + + E+ LD EL+ K+ E D + L
Sbjct: 243 QFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQE--------DVSKLSPLQ 294
Query: 711 IKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKI 770
K E L LLD +VEK L + N + +DK++ L S EA +
Sbjct: 295 YDCWWEKVENLQDLLDRATN----QVEKAALVLD---QNQDLRDKVDKLEASLK--EANV 345
Query: 771 SELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE 821
S+ ++ + + L +++ L EE I + E +KEF +
Sbjct: 346 SKFSSYK------VELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQD 390
Score = 34.9 bits (80), Expect = 0.48
Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 32/287 (11%)
Query: 27 LPLEPCQTTGSDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTK--SDNGNQTEVPTTSTV 84
L L + ++ ++I + LQ + + L+ + E R K + E+
Sbjct: 145 LLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLE 204
Query: 85 RNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLE 144
+ EL+ + +L++E+ LK + L I+ L+ +L + + E+ V
Sbjct: 205 KLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVF---- 260
Query: 145 EKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTV--EDIKKANESAIAKKDEVIEKLK 202
L++E L LR+L+ V ED+ K + E +E L+
Sbjct: 261 --------------KLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQ 306
Query: 203 AELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEK--QELIEVIQNHETLIA 260
L+ + EK + V + N D D ++ L++ V K +E++Q L
Sbjct: 307 DLLDRATNQV-EKAALVLD-QNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKL-- 362
Query: 261 KLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQE 307
LE L E + + +L Q++ +KE + + L+ K++ E
Sbjct: 363 -LEERLQASDHEIHSYI--QLYQES-IKEFQDTLSKLKEESKKRSLE 405
Score = 31.4 bits (71), Expect = 5.4
Identities = 79/420 (18%), Positives = 157/420 (37%), Gaps = 73/420 (17%)
Query: 810 RNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLK---AELVAQAESTQLVKQEQA 866
R + K+ K I+ +SN K+Q T E L+ V + +
Sbjct: 40 RGFSSQQKKKRGKNIA--PKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDH 97
Query: 867 LLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEI----NAKVTELSI 922
A+ D+ I + + + N + +Q + +E+L +I + I A++ L
Sbjct: 98 NRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQAL-- 155
Query: 923 IMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEE 982
+ +K + + L K+ + ++E A ++ E I ++ + E+
Sbjct: 156 ------EDLEKILTEKEALQGKINILEMR-------LSETDARIKLAAQEKIHVEILEEQ 202
Query: 983 LQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDK 1042
L+ L L T L +ELD L EE IQ L+ ++ E+ +
Sbjct: 203 LEKLRNELLIRGATEGLCVHSL------SKELDV-LKEENMLLKDDIQFLKAELIEVAET 255
Query: 1043 LRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIH----EFEVKTNTLSDLQTQLDTY 1098
+E E + + ELE ++ + +++ + +LQ LD
Sbjct: 256 EERVFKLEKERSLLDASLRELE---SKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRA 312
Query: 1099 NAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMK 1158
++ AALV + ++++++ LE SL++A
Sbjct: 313 TNQVEKAALVLDQNQDLRDKVDKLE------------------------ASLKEA----- 343
Query: 1159 SDNASLLLEKNTLMETKLTLEAQLKELADNETQ-----YKQMQIVYEDTQRKLNEELARR 1213
+ + K L++ KL L + + +D+E Y++ ++DT KL EE +R
Sbjct: 344 -NVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKR 402
>gnl|CDD|233973 TIGR02680, TIGR02680, TIGR02680 family protein. Members of this
protein family belong to a conserved gene four-gene
neighborhood found sporadically in a phylogenetically
broad range of bacteria: Nocardia farcinica,
Symbiobacterium thermophilum, and Streptomyces
avermitilis (Actinobacteria), Geobacillus kaustophilus
(Firmicutes), Azoarcus sp. EbN1 and Ralstonia
solanacearum (Betaproteobacteria). Proteins in this
family average over 1400 amino acids in length
[Hypothetical proteins, Conserved].
Length = 1353
Score = 40.9 bits (96), Expect = 0.007
Identities = 48/255 (18%), Positives = 83/255 (32%), Gaps = 31/255 (12%)
Query: 121 RIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTV 180
RI EL+ +L D +L E A E+ L R L +E+ R L
Sbjct: 743 RIAELDARLAAVDD-------ELAELARELRALGARQRALADELAGAPSD-RSLRA--AH 792
Query: 181 EDIKKANESAIAKKDEV---IEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEE 237
+A A + + E+ K A + ++A RE E + + A + V
Sbjct: 793 RRAAEAERQAESAERELARAARKAAAAAAAWKQARRELERDAADLDLPTDPDALEAVGLA 852
Query: 238 LEKLV-------VEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKEL 290
L++ V +EL A+ + +E E + E + L
Sbjct: 853 LKRFGDHLHTLEVAVRELRHAATRAAEQRARAARAESDAREAAEDAAEARAEAEEASLRL 912
Query: 291 KSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKL 350
+ TLE S+ E+ + + + +E + E LA E +
Sbjct: 913 R----TLEESVGAMVDEIRARL-------AETRAALASGGRELPRLAEALATAEEARGRA 961
Query: 351 KTHSESLQKQLLEKE 365
+ L E+
Sbjct: 962 EEKRAEADATLDERA 976
Score = 40.6 bits (95), Expect = 0.011
Identities = 63/378 (16%), Positives = 127/378 (33%), Gaps = 59/378 (15%)
Query: 1036 VKELQDKLRSYTHVENELGQYRSKVYELEQI--QARLEAERTQWIHEFEVKTNTLSDLQT 1093
+ ++ D L +EL + + L + R A + L QT
Sbjct: 222 LTDVADALEQLDEYRDELERLEALERALRNFLQRYRRYARTM-----LRRRATRLRSAQT 276
Query: 1094 QLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDA 1153
Q D + +LG +++++T E++EL + + ++ L+ L++LQ +
Sbjct: 277 QYDQLSR----------DLGRARDELETAREEERELDARTEALEREADALRTRLEALQGS 326
Query: 1154 FSVMKSDNASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARR 1213
+ + L + EA AD ++ + E+ +R+L+EE R
Sbjct: 327 -PAYQ--------DAEELERARADAEALQAAAADARQAIREAESRLEEERRRLDEEAGRL 377
Query: 1214 DATIATLNTTGAPDLNASIENI------LKEKDATLSE-MLKKSEAKDKTLQEMQ----- 1261
D L L + E E DA L+ L++ A D Q+
Sbjct: 378 DDAERELRAA-REQLARAAERAGLSPAHTAEPDAALAAQELQELGALDARRQDADRVIAQ 436
Query: 1262 -----AALEKHLSEKYQFEKEALELRT-----EDLEYKLQEKEKMIQELNEMKQSFFIGD 1311
A L + + E R ++ + + ++ E + +
Sbjct: 437 RSEQVALLRRRDDVADRAEATHAAARARRDELDEEAEQAAARAELADEAVHREGARLAWV 496
Query: 1312 SKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEI---DNMKETITYLEQYNLQLSKS 1368
+ + ++EL L + ++ L S + + Y L +
Sbjct: 497 D------AWQAQLRELTILAVDDQPGALADLDSWDALLQGEAPVRVAVYSAVQPLADELT 550
Query: 1369 QESSTTLTLLQSELAEQR 1386
+E + L L + L E+R
Sbjct: 551 RERA-ALRLAEEVLEEER 567
Score = 33.6 bits (77), Expect = 1.4
Identities = 61/374 (16%), Positives = 135/374 (36%), Gaps = 46/374 (12%)
Query: 42 EISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKI 101
++++A + L D+L ++ + + ++ T R L Y++
Sbjct: 224 DVADALEQLDEYRDEL-ERLEALERALRNFLQRYRRYARTMLRRRATRLRSAQTQYDQLS 282
Query: 102 RALN---EEVSQLKTKENELHSRIEELEDKL----QQKIDDEKSVSYQLEEKAIEISQLT 154
R L +E+ + +E EL +R E LE + + + S +YQ A E+ +
Sbjct: 283 RDLGRARDELETAREEERELDARTEALEREADALRTRLEALQGSPAYQ---DAEELERAR 339
Query: 155 EHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALRE 214
LQ + +R+ + + E+ ++ +E A + D+ +L+A E + +A
Sbjct: 340 ADAEALQAAAADARQAIREAESRLE-EERRRLDEEA-GRLDDAERELRAAREQLARAAER 397
Query: 215 KESEVEEWGNNDA---------WGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEAD 265
DA GA D +++ ++++ ++ E + +++ + + + EA
Sbjct: 398 AGLSPAHTAEPDAALAAQELQELGALDARRQDADRVIAQRSEQVALLRRRDDVADRAEAT 457
Query: 266 LTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQ------ELEGWT------- 312
+ ++ + A + V A L + EL
Sbjct: 458 HAAARARRDELDEEAEQAAARAELADEAVHREGARLAWVDAWQAQLRELTILAVDDQPGA 517
Query: 313 --DNDNW--GSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMEL 368
D D+W G A+ + + ++L ++ + L ++ L E+ L
Sbjct: 518 LADLDSWDALLQGEAPVRVAVYSAVQPLADELTRERAAL-------RLAEEVLEEERDAL 570
Query: 369 EEWGNNDSWGGDND 382
G D D
Sbjct: 571 RTERERLEQGTDRD 584
Score = 31.3 bits (71), Expect = 7.1
Identities = 49/298 (16%), Positives = 91/298 (30%), Gaps = 32/298 (10%)
Query: 928 KQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENIS-IKQMNEELQAL 986
+ + E E LDA+ + + ++ L AE + + E LQA
Sbjct: 289 RDELETAREEERELDARTEALEREADALRTRLEALQGSPAYQDAEELERARADAEALQAA 348
Query: 987 TETLKQTS----NTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDK 1042
+Q + EE+R+ LDE R+ + + +L ++ +
Sbjct: 349 AADARQAIREAESRLEEERRRLDEEAGRLDDAERELRAARE---------QLARAAERAG 399
Query: 1043 LRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKI 1102
L E + ++ EL + AR + + I + + L D A
Sbjct: 400 LSPAHTAEPDAALAAQELQELGALDARRQDAD-RVIAQRSEQVALLRRRDDVADRAEATH 458
Query: 1103 THAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNA 1162
A EL E Q + EL + A + Q+ +++ D+
Sbjct: 459 AAARARRDELDEEAEQAA----ARAELADEAVHREGARLAWVDAWQAQLRELTILAVDDQ 514
Query: 1163 SLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATL 1220
L A L +++ + L +EL R A +
Sbjct: 515 PGAL-------------ADLDSWDALLQGEAPVRVAVYSAVQPLADELTRERAALRLA 559
>gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein
[Function unknown].
Length = 294
Score = 40.0 bits (94), Expect = 0.007
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
EL + EK LN +V +L+ K EL +E+ +++Q+ + ++ +L+E
Sbjct: 31 ELRKEASELAEKRDELNAKVRELREKAQELREERDEINEEVQELKEKRDEINAKLQELRK 90
Query: 149 EISQLTEHN---RFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAEL 205
E +L E ++SL+ ++ L++ + E + +K I++L+ EL
Sbjct: 91 EYRELKEKRNEFNLGGRSIKSLEREIERLEKKQQTSVLTPEEERELVQK---IKELRKEL 147
Query: 206 ESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEAD 265
E +KAL E E E D++K++ ++ + QEL Q + + KL +
Sbjct: 148 EDAKKALEENEKLKELKAE------IDELKKKAREIHEKIQELANEAQEYHEEMIKLFEE 201
Query: 266 LTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQD 325
+++E + +E + EL + L+ L++ E++++ + +
Sbjct: 202 ADELRKEADELHEEFVELSKKIDELHEEFRNLQNELRELEKKIKALRAKEKAAKR--REK 259
Query: 326 IEALKKENEEIKEKLAKQE 344
E LK+ EEI EK + E
Sbjct: 260 REELKERAEEIYEKFKRGE 278
>gnl|CDD|220623 pfam10186, Atg14, UV radiation resistance protein and
autophagy-related subunit 14. The Atg14 or Apg14
proteins are hydrophilic proteins with a predicted
molecular mass of 40.5 kDa, and have a coiled-coil motif
at the N terminus region. Yeast cells with mutant Atg14
are defective not only in autophagy but also in sorting
of carboxypeptidase Y (CPY), a vacuolar-soluble
hydrolase, to the vacuole. Subcellular fractionation
indicate that Apg14p and Apg6p are peripherally
associated with a membrane structure(s). Apg14p was
co-immunoprecipitated with Apg6p, suggesting that they
form a stable protein complex. These results imply that
Apg6/Vps30p has two distinct functions: in the autophagic
process and in the vacuolar protein sorting pathway.
Apg14p may be a component specifically required for the
function of Apg6/Vps30p through the autophagic pathway.
There are 17 auto-phagosomal component proteins which are
categorized into six functional units, one of which is
the AS-PI3K complex (Vps30/Atg6 and Atg14). The AS-PI3K
complex and the Atg2-Atg18 complex are essential for
nucleation, and the specific function of the AS-PI3K
apparently is to produce phosphatidylinositol 3-phosphate
(PtdIns(3)P) at the pre-autophagosomal structure (PAS).
The localisation of this complex at the PAS is controlled
by Atg14. Autophagy mediates the cellular response to
nutrient deprivation, protein aggregation, and pathogen
invasion in humans, and malfunction of autophagy has been
implicated in multiple human diseases including cancer.
This effect seems to be mediated through direct
interaction of the human Atg14 with Beclin 1 in the human
phosphatidylinositol 3-kinase class III complex.
Length = 307
Score = 40.0 bits (94), Expect = 0.009
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 1506 NELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTE----EDNTSEL-VK 1560
EL L L L E L ++ + L T NE+ +L LLK E ++ +++ +
Sbjct: 23 YELRLDLARLLLENEELKQKVEEA-LEGAT--NEDGKLAADLLKLEVARKKERLNQIRAR 79
Query: 1561 AEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQ 1620
Q +++ K EE ++ A + S S Q + SQ++ L ++ ++ + KL
Sbjct: 80 ISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQLEKLQDEIKRTRSKLNA 139
Query: 1621 AEDVVQKHQ-------ASLTNLQ 1636
++ + + A L L+
Sbjct: 140 LHSLLAEKRSFLCRELAKLFPLR 162
Score = 38.1 bits (89), Expect = 0.033
Identities = 21/131 (16%), Positives = 54/131 (41%), Gaps = 21/131 (16%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEEL-----EDKLQQKIDDEKSVSYQLEEKAIEI-- 150
+ L ++++L + EL ++EE + + D K + +E+ +I
Sbjct: 19 RNSLYELRLDLARLLLENEELKQKVEEALEGATNEDGKLAADLLKLEVARKKERLNQIRA 78
Query: 151 --SQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESV 208
SQL E +E ++ LK L +++ + ++ ++ ++LE +
Sbjct: 79 RISQLKEEIEQKRERIEELKRALAQRRSDLS------------SASYQLEKRRASQLEKL 126
Query: 209 EKALREKESEV 219
+ ++ S++
Sbjct: 127 QDEIKRTRSKL 137
Score = 35.0 bits (81), Expect = 0.30
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 1609 EQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKN 1668
E K+K++E L A + K A L L++ ++ E+ N+I + L+ E+ K
Sbjct: 38 ELKQKVEEALEGATNEDGKLAADLLKLEVARKK---ERLNQIRARISQLKEEI---EQKR 91
Query: 1669 NELTQLISTLQHQLQEARESLSAAG-----RLSDQLNQKSQTIQELTEKVNQLMEELNKK 1723
I L+ L + R LS+A R + QL + I+ K+N L L +K
Sbjct: 92 ER----IEELKRALAQRRSDLSSASYQLEKRRASQLEKLQDEIKRTRSKLNALHSLLAEK 147
Query: 1724 EAKL-KEVNN 1732
+ L +E+
Sbjct: 148 RSFLCRELAK 157
Score = 33.1 bits (76), Expect = 1.4
Identities = 27/141 (19%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 540 RIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQ 599
+ L ENE L+ +VE+ + + + +L A+ +L EV +
Sbjct: 28 DLARLLLENEELKQKVEEA--------------LEGATNEDGKLAADLLKL--EVARKKE 71
Query: 600 ENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESK-DQVDDSIEK---TLRNEIQ 655
+++ ++ Q E+ + E I++L+ + R L S Q++ L++EI+
Sbjct: 72 RLNQIRARISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQLEKLQDEIK 131
Query: 656 ELHAKLINVEALVNQAQVEKQ 676
+KL + +L+ + +
Sbjct: 132 RTRSKLNALHSLLAEKRSFLC 152
>gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein. This family consists
of several eukaryotic mitotic checkpoint (Mitotic arrest
deficient or MAD) proteins. The mitotic spindle
checkpoint monitors proper attachment of the bipolar
spindle to the kinetochores of aligned sister chromatids
and causes a cell cycle arrest in prometaphase when
failures occur. Multiple components of the mitotic
spindle checkpoint have been identified in yeast and
higher eukaryotes. In S.cerevisiae, the existence of a
Mad1-dependent complex containing Mad2, Mad3, Bub3 and
Cdc20 has been demonstrated.
Length = 722
Score = 40.3 bits (94), Expect = 0.011
Identities = 108/581 (18%), Positives = 223/581 (38%), Gaps = 68/581 (11%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
ELM ++ L + S L R ELE +L+ + EK
Sbjct: 76 ELMQKELEHKRAQIELERKASTLAENYERELDRNLELEVRLKALEELEKK---------- 125
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKD--EVIEKLKAELE 206
+ E +++ + L + + E +K NE K+ E I ++K +L
Sbjct: 126 -----------AENEAAEAEEEAKLLKDKLDAESLKLQNEKEDQLKEAKESISRIKNDLS 174
Query: 207 SVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADL 266
++ + ++E++ + +++E+LE+ E E + +Q+ + A +
Sbjct: 175 EMQCRAQNADTELKLLESELE-----ELREQLEECQKELAEAEKKLQSLTSEQASSADNS 229
Query: 267 TRVK--EEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQ 324
++K EE+ E +KE ++ LE L +E N ++
Sbjct: 230 VKIKHLEEELKRYEQDAEVVKSMKEQLLQIPELERELAALREE--------NRKLRSMKE 281
Query: 325 DIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDN--- 381
D E LK+E E+++ +L + E KL L+ + + E EL+ W + G N
Sbjct: 282 DNELLKEELEDLQSRLERFEKMREKLAD----LELEKEKLENELKSWKSLLQDIGLNLRT 337
Query: 382 -----DKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTEL 436
++ LQ E L EK + + +E L++ + + + +L
Sbjct: 338 PDDLSRRIVVLQNEELQLKEKNGSISSSAKQLETTLQQLQLERQKAVSE---ILELKKKL 394
Query: 437 NNLRAKCSEFEKTIVELKSQEELLKQAL--IDKENELSEWGQTNEWGSPSSSDLNTLREE 494
L+A ++ + + + + L+ L DKE + + DL +
Sbjct: 395 EALKALVRRLQRRLTLVTKERDGLRAILNSYDKELTETSVSGQLMKRLEEAEDLVQKVQS 454
Query: 495 SGL--------LRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRES---RIEM 543
L + + +QK + L+T+++ ++ S+ + + + +IE
Sbjct: 455 HLAKMENQLSELEEDVGQQKDRNNTLETEIKLLKEQLVSNERLLSFVKEATNALRLKIET 514
Query: 544 LSRENEGLRTRVEQLGLVIENNYVQESDPMNNS--LDNTAQLTAEKERLDEEVTVLSQEN 601
L RE + LR L + +E+ +Q + + L + +E E++ ++ Q
Sbjct: 515 LERERDRLRQEKSLLEMKLEHLCLQGDYNASRTKVLHMSLNPASEAEQIAKQTIEALQAE 574
Query: 602 IELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQV 642
E K+ QA+E+ K ++++ +E + K QV
Sbjct: 575 CEKLKERLQALEEGKSQPGDLEKAVGSHISSKEIAQLKKQV 615
Score = 38.4 bits (89), Expect = 0.039
Identities = 89/470 (18%), Positives = 185/470 (39%), Gaps = 38/470 (8%)
Query: 189 SAIAKKDEVIEKLKAELESVEKALREKESEVE---EWGNNDAWGASDDVKEELEKLVVEK 245
S +A+ E ELE KAL E E + E +A D + E KL EK
Sbjct: 96 STLAENYERELDRNLELEVRLKALEELEKKAENEAAEAEEEAKLLKDKLDAESLKLQNEK 155
Query: 246 QELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKE 305
++ ++ + + I +++ + + E+ ++ ++EL+ ++E + L + E
Sbjct: 156 EDQLKEAKESISRIKNDLSEMQCRAQNADTELK---LLESELEELREQLEECQKELAEAE 212
Query: 306 QELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESL-QKQLLEK 364
++L+ T + + + + ++E+L + E +K+ E L Q LE+
Sbjct: 213 KKLQSLTSEQASSADNSVK--------IKHLEEELKRYEQDAEVVKSMKEQLLQIPELER 264
Query: 365 EMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEA----------LKK 414
E+ +N KL +++++N++L E++ +LQ++L E+ +K
Sbjct: 265 ELAALR--------EENRKLRSMKEDNELLKEELEDLQSRLERFEKMREKLADLELEKEK 316
Query: 415 KENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEW 474
EN+L+ W N ++L + + ++LK + + + E L +
Sbjct: 317 LENELKSWKSLLQDIGLNLRTPDDLSRRIVVLQNEELQLKEKNGSISSSAKQLETTLQQL 376
Query: 475 GQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQV 534
+ +L E L ++L + +++K + L A
Sbjct: 377 QLERQKAVSEILELKKKLEALKALVRRLQRRLTLVTKERDGLRAILNSYDKELTETSVSG 436
Query: 535 QDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEV 594
Q + E E L +V+ +EN + + + D L E + L E++
Sbjct: 437 QLMKRL-----EEAEDLVQKVQSHLAKMENQLSELEEDVGQQKDRNNTLETEIKLLKEQL 491
Query: 595 TVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDD 644
+ +K+ K + LE E +L ++ S+L +LE D
Sbjct: 492 VSNERLLSFVKEATNALRLKIETLERERDRLRQEKSLLEMKLEHLCLQGD 541
Score = 36.8 bits (85), Expect = 0.13
Identities = 84/479 (17%), Positives = 189/479 (39%), Gaps = 50/479 (10%)
Query: 724 LLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNE 783
L+ +N L ++E + +I+L+ + + + +LE ++ L + NE
Sbjct: 70 LIQLENELMQKELEHKRAQIELERKASTLAENYERELDRNLELEVRLKALEELEKKAENE 129
Query: 784 INDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQE 843
+ + L ++ L L L+ +++LKE E ++ + Q E
Sbjct: 130 AAEAEEEAKLLKDK---LDAESLKLQNEKEDQLKEAKESISRIKNDLSEMQCRAQNADTE 186
Query: 844 TDTLKAEL--------VAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQEN 895
L++EL Q E + K+ Q+L + + ++ + L++ L+ +Q+
Sbjct: 187 LKLLESELEELREQLEECQKELAEAEKKLQSLTSEQASSADNSVKIKHLEEELKRYEQDA 246
Query: 896 TLVVENLQNLIAQKDYE----------------------INAKVTELSIIMEKCKQYEDK 933
+V + L+ + E + ++ +L +E+ ++ +K
Sbjct: 247 EVVKSMKEQLLQIPELERELAALREENRKLRSMKEDNELLKEELEDLQSRLERFEKMREK 306
Query: 934 CIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQT 993
+LE + + + + L ++ L +++S + + LQ LK+
Sbjct: 307 LADLELEKEKLENELKSWKSLLQDIGLNLRT------PDDLSRRIV--VLQNEELQLKEK 358
Query: 994 SNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENEL 1053
+ + K L+ Q++Q K EI ++ L+ V+ LQ +L T V E
Sbjct: 359 NGSISSSAKQLETTLQQLQLERQKAVSEILELKKKLEALKALVRRLQRRL---TLVTKER 415
Query: 1054 GQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKI-THAALVEQEL 1112
R+ + ++ E DL ++ ++ AK+ + +E+++
Sbjct: 416 DGLRAILNSYDKELTETSVSGQLMKRLEEA-----EDLVQKVQSHLAKMENQLSELEEDV 470
Query: 1113 GEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTL 1171
G+ K++ TLE E + L +Q+ +F+K +L+ ++ + L EK+ L
Sbjct: 471 GQQKDRNNTLETEIKLLKEQLVSNERLLSFVKEATNALRLKIETLERERDRLRQEKSLL 529
Score = 33.7 bits (77), Expect = 1.2
Identities = 102/502 (20%), Positives = 205/502 (40%), Gaps = 58/502 (11%)
Query: 1052 ELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQE 1111
EL + +SK+ +LE + E E + E E K +TL++ + N ++ +E
Sbjct: 62 ELIRSKSKLIQLENELMQKELEHKRAQIELERKASTLAENYERELDRNLELEVRLKALEE 121
Query: 1112 L-GEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNAS------- 1163
L + +N+ E E + L ++ ES+ K + ++ S
Sbjct: 122 LEKKAENEAAEAEEEAKLLKDKLDAESLKLQNEKEDQLKEAKESISRIKNDLSEMQCRAQ 181
Query: 1164 -----LLLEKNTLMETKLTLEAQLKELADNETQYKQMQIV------YEDTQRKLNEELAR 1212
L L ++ L E + LE KELA+ E + + + + L EEL R
Sbjct: 182 NADTELKLLESELEELREQLEECQKELAEAEKKLQSLTSEQASSADNSVKIKHLEEELKR 241
Query: 1213 RDATIATLNT-----TGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKH 1267
+ + + P+L + L+E++ L M + +E + L+++Q+ LE+
Sbjct: 242 YEQDAEVVKSMKEQLLQIPELERELAA-LREENRKLRSMKEDNELLKEELEDLQSRLER- 299
Query: 1268 LSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQEL 1327
EK + + LEL E LE +L+ + ++Q D ++R + ++ + +
Sbjct: 300 -FEKMREKLADLELEKEKLENELKSWKSLLQ------------DIGLNLR-TPDDLSRRI 345
Query: 1328 RELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRT 1387
LQ L+ + ++ ++ T+ L+ + Q++ + + L+ +L +
Sbjct: 346 VVLQNEELQLKEKNGSISSSAKQLETTLQQLQL------ERQKAVSEILELKKKLEALKA 399
Query: 1388 LNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLAT 1447
L ++L Q T T+ + + IL K L K+L+ + +
Sbjct: 400 LVRRL-QRRLTLVTKERDGLRAIL-------NSYDKELTETSVSGQLMKRLEEAEDLVQK 451
Query: 1448 KERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNE 1507
+ LA+ + QLS E+V Q N+ E + + +E+ V + + N
Sbjct: 452 VQSHLAKMENQLSEL---EEDVGQQKDRNNTLETEIKLLKEQLVSNERLLS-FVKEATNA 507
Query: 1508 LALRLQNLQEEKTMLLTEINDL 1529
L L+++ L+ E+ L E + L
Sbjct: 508 LRLKIETLERERDRLRQEKSLL 529
Score = 31.4 bits (71), Expect = 5.1
Identities = 71/421 (16%), Positives = 161/421 (38%), Gaps = 17/421 (4%)
Query: 1069 RLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQE 1128
+ ++ + H V T+ LS LQ Q++ + A L+ + L + E
Sbjct: 25 KFLSQPLEGSHHLGVSTSALSSLQKQVEESMTLLQRAELIRSK--------SKLIQLENE 76
Query: 1129 LLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADN 1188
L+++ E A L+ + +L + + N L + L E + E + E +
Sbjct: 77 LMQKELEHKRAQIELERKASTLAENYERELDRNLELEVRLKALEELEKKAENEAAEAEEE 136
Query: 1189 ETQYKQ-MQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEML 1247
K + Q + ++L +I+ + ++ +N E SE+
Sbjct: 137 AKLLKDKLDAESLKLQNEKEDQLKEAKESISRIKND-LSEMQCRAQNADTELKLLESELE 195
Query: 1248 KKSEAKDKTLQEMQAALEKHLS-EKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQS 1306
+ E ++ +E+ A +K S Q ++ + LE +L+ E+ + + MK+
Sbjct: 196 ELREQLEECQKELAEAEKKLQSLTSEQASSADNSVKIKHLEEELKRYEQDAEVVKSMKEQ 255
Query: 1307 FFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVL---RSATEIDNMKETITYLEQYNL 1363
+ + E ++LR ++ NE L+ E+ + M+E + LE
Sbjct: 256 LLQIPELERELAALREENRKLRSMKEDNELLKEELEDLQSRLERFEKMREKLADLELEKE 315
Query: 1364 QLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPK 1423
+L E + +LLQ RT + +IV ++ E ++ ++ +
Sbjct: 316 KL--ENELKSWKSLLQDIGLNLRTPDDLSRRIVVLQNEEL-QLKEKNGSISSSAKQLETT 372
Query: 1424 LKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADG 1483
L+ L + ++ + L + + + +L+L + + + +++S D+ +
Sbjct: 373 LQQLQLERQKAVSEILELKKKLEALKALVRRLQRRLTLVTKERDGLRAILNSYDKELTET 432
Query: 1484 E 1484
Sbjct: 433 S 433
>gnl|CDD|197874 smart00787, Spc7, Spc7 kinetochore protein. This domain is found
in cell division proteins which are required for
kinetochore-spindle association.
Length = 312
Score = 39.6 bits (93), Expect = 0.013
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 9/214 (4%)
Query: 603 ELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRN--EIQELHAK 660
ELKK + + + K +EEE L + + +E + V ++K + L AK
Sbjct: 74 ELKKYISEGRDLFKEIEEET--LINNPPLFKEYFSASPDVKLLMDKQFQLVKTFARLEAK 131
Query: 661 LINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEE 720
+ E + + K+ LD E LKE Y+ + K + L+ + +
Sbjct: 132 KMWYEWRMKLLEGLKEGLDENLEGLKEDYKLLM-KELELLNSIKPKLRDRKDALEEELRQ 190
Query: 721 LCRLLDEKNTLDNIKVEKENLEIQLDNL-NTNYQDKINTLIQSKNDLEAKISELNNAQHN 779
L +L DE D ++++ +++ K+ L + +LE+KI +L N +
Sbjct: 191 LKQLEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSE 250
Query: 780 KNNEINDLNKRISLFEENNAFLQRSILDLERNLD 813
N EI + K+ E+ F + I L+ L
Sbjct: 251 LNTEIAEAEKK---LEQCRGFTFKEIEKLKEQLK 281
Score = 35.8 bits (83), Expect = 0.19
Identities = 24/102 (23%), Positives = 49/102 (48%)
Query: 587 KERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
KE LDE + L ++ L K+LE + L + LEE+ L++ + + D +
Sbjct: 146 KEGLDENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELEDCDPTE 205
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEK 688
+ ++++L +++ + + + E Q L+ K E+L K
Sbjct: 206 LDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNK 247
Score = 33.5 bits (77), Expect = 0.96
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1611 KEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNE 1670
KE L E L ++ + L L + + + KD + + Q E E
Sbjct: 146 KEGLDENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELEDCDPTE 205
Query: 1671 LTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
L + L+ LQE + L ++L + I++LT K ++L E+ + E KL++
Sbjct: 206 LDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQ 264
Score = 33.1 bits (76), Expect = 1.5
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 584 TAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVD 643
E +R E++ L QE + KKLE+ E+ + LE +I+ L S L ++ ++
Sbjct: 203 PTELDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKL 262
Query: 644 DSIEKTLRNEIQELHAKLINVEALVN 669
+ EI++L +L +++L
Sbjct: 263 EQCRGFTFKEIEKLKEQLKLLQSLTG 288
Score = 31.5 bits (72), Expect = 4.2
Identities = 23/101 (22%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 323 EQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDN- 381
++++E LK++ + + ++L S KL+ ++L+++L + + +E + D D
Sbjct: 150 DENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELEDCDPTELDRA 209
Query: 382 -DKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLED 421
+KL L QE + +K+ EL+ +L +E ++ N +
Sbjct: 210 KEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSE 250
Score = 30.4 bits (69), Expect = 9.1
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 981 EELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQ 1040
EL E LK+ K L+E ++ +QE L +I T+ L ++ E +
Sbjct: 204 TELDRAKEKLKKLLQEIMIKVKKLEELEEELQE----LESKIEDLTNKKSELNTEIAEAE 259
Query: 1041 DKLRSYTHVEN-ELGQYRSKVYELEQI 1066
KL E+ + + ++ L+ +
Sbjct: 260 KKLEQCRGFTFKEIEKLKEQLKLLQSL 286
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y. Members of this family are
RNase Y, an endoribonuclease. The member from Bacillus
subtilis, YmdA, has been shown to be involved in
turnover of yitJ riboswitch [Transcription, Degradation
of RNA].
Length = 514
Score = 39.9 bits (94), Expect = 0.014
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 34/189 (17%)
Query: 115 ENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI-----EISQLTEHNRFLQEEMQSLKD 169
+ ++ E+ ++ I++ K + L+++A+ E+ +L L+ E++ ++
Sbjct: 20 KRIAEKKLGSAEELAKRIIEEAKKEAETLKKEALLEAKEEVHKLRAE---LERELKERRN 76
Query: 170 KLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWG 229
+L+ L+ + E + +K E ++K + LE EK L KE ++E
Sbjct: 77 ELQRLERRL------LQREETLDRKMESLDKKEENLEKKEKELSNKEKNLDEK------- 123
Query: 230 ASDDVKEELEKLVVEKQELIEVI------QNHETLIAKLEADLT--RVKEEKEAEVSGKL 281
+EELE+L+ E++E +E I + E L+ ++E + K KE E K
Sbjct: 124 -----EEELEELIAEQREELERISGLTQEEAKEILLEEVEEEARHEAAKLIKEIEEEAKE 178
Query: 282 EQDAMVKEL 290
E D KE+
Sbjct: 179 EADKKAKEI 187
Score = 38.8 bits (91), Expect = 0.027
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLE---- 637
+L +E LD ++ L ++ L+KK ++ K+K L+E+ ++LEE + RE+LE
Sbjct: 84 RLLQREETLDRKMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAEQREELERISG 143
Query: 638 -SKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQA 677
++++ + + + + E + AKLI + + +K+A
Sbjct: 144 LTQEEAKEILLEEVEEEARHEAAKLIKEIEEEAKEEADKKA 184
Score = 35.7 bits (83), Expect = 0.27
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 914 NAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAEN 973
+A+ II E K+ E + E+ L+AK + +L + EL +Q
Sbjct: 29 SAEELAKRIIEEAKKEAETL--KKEALLEAKEEVHKLRAELER----ELKERRNELQRLE 82
Query: 974 ISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTL- 1032
+ Q E L E+L + E+ K L ++ + E + +L E IA + ++ +
Sbjct: 83 RRLLQREETLDRKMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAEQREELERIS 142
Query: 1033 EIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERT 1075
+ +E ++ L VE E +K+ + + +A+ EA++
Sbjct: 143 GLTQEEAKEILL--EEVEEEARHEAAKLIKEIEEEAKEEADKK 183
Score = 35.3 bits (82), Expect = 0.34
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 885 KQNLESVKQENTLVV-ENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDA 943
K+ E++K+E L E + L A+ + E+ + EL + + Q E+ +LD
Sbjct: 42 KKEAETLKKEALLEAKEEVHKLRAELERELKERRNELQRLERRLLQREETLDRKMESLDK 101
Query: 944 KLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKI 1003
K + KE+ NK L E ++ I + EEL+ + + T EE ++I
Sbjct: 102 KEENLEKKEKELSNKEKNLDEKEEELEEL---IAEQREELE------RISGLTQEEAKEI 152
Query: 1004 LDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDK 1042
L ++E++ + E A +I+ +E + KE DK
Sbjct: 153 L------LEEVEEEARHEAA---KLIKEIEEEAKEEADK 182
Score = 34.1 bits (79), Expect = 0.70
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 44/175 (25%)
Query: 255 HETLIAKLEADLTRVKEE--KEAEVSGK---LEQDAMVKELKSKVETLEASLKQKEQELE 309
E + E R+ EE KEAE K LE V +L+++ LE LK++ EL+
Sbjct: 23 AEKKLGSAEELAKRIIEEAKKEAETLKKEALLEAKEEVHKLRAE---LERELKERRNELQ 79
Query: 310 GWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELE 369
L++ + +E L ++ +L K + + E +K+L KE L+
Sbjct: 80 ------------------RLERRLLQREETLDRKMESLDKKEENLEKKEKELSNKEKNLD 121
Query: 370 EWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEA----LKKKENDLE 420
E ++L L E + E++S L+ EEA L++ E +
Sbjct: 122 EK---------EEELEELIAEQREELERISG-----LTQEEAKEILLEEVEEEAR 162
Score = 33.7 bits (78), Expect = 0.95
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 98 NEKIRALNEEVSQLKTK-ENELHSRIEEL----------EDKLQQKIDDEKSVSYQLEEK 146
E + EEV +L+ + E EL R EL E+ L +K++ LE+K
Sbjct: 50 KEALLEAKEEVHKLRAELERELKERRNELQRLERRLLQREETLDRKMESLDKKEENLEKK 109
Query: 147 AIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELE 206
E+S ++ +EE++ L + R+ E ++ ++A E + +EV E+ + E
Sbjct: 110 EKELSNKEKNLDEKEEELEELIAEQREELERISGLTQEEAKEILL---EEVEEEARHEA- 165
Query: 207 SVEKALREKESEVEE 221
K ++E E E +E
Sbjct: 166 --AKLIKEIEEEAKE 178
Score = 32.6 bits (75), Expect = 2.0
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 1544 KQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQ 1603
K+ + K + EL + +Q L +L + EE + + ++ + L+++
Sbjct: 57 KEEVHKLRAELERELKERRNELQRLERRLLQREETLDRKMESLDKKEENLEKKEKELSNK 116
Query: 1604 VKSLTEQKEKLQEKLYQAEDVVQKHQASLTN---LQIVLEQFQAEKDNEIA 1651
K+L E++E+L+E + + + +++ + LT +I+LE+ + E +E A
Sbjct: 117 EKNLDEKEEELEELIAEQREELER-ISGLTQEEAKEILLEEVEEEARHEAA 166
Score = 32.6 bits (75), Expect = 2.2
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 1560 KAEQTIQDLHVKLREAEER-------VKSSATAYTSASVRSNQQVEA-LTSQVKSLTEQK 1611
A++ I++ +EAE K + R ++ L + L +++
Sbjct: 33 LAKRIIEEAK---KEAETLKKEALLEAKEEVHKLRAELERELKERRNELQRLERRLLQRE 89
Query: 1612 EKLQEK---LYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQ--GELNNSYA 1666
E L K L + E+ ++K + L+N + L++ + E + IA+ E L+ L A
Sbjct: 90 ETLDRKMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAEQREELERISGLTQEEA 149
Query: 1667 KNNELTQLISTLQHQ 1681
K L ++ +H+
Sbjct: 150 KEILLEEVEEEARHE 164
Score = 32.6 bits (75), Expect = 2.5
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 605 KKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVD---DSIEKTL---RNEIQELH 658
+KKL A E K + EE ++ E +T LE+K++V +E+ L RNE+Q L
Sbjct: 24 EKKLGSAEELAKRIIEEAKK-EAETLKKEALLEAKEEVHKLRAELERELKERRNELQRLE 82
Query: 659 AKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKK 718
+L+ E + LD K E L +K E + +K + + K+ KNL K+
Sbjct: 83 RRLLQRE----------ETLDRKMESLDKKEENLEKKEKELSNKE--------KNLDEKE 124
Query: 719 EELCRLLDEKN 729
EEL L+ E+
Sbjct: 125 EELEELIAEQR 135
>gnl|CDD|240419 PTZ00440, PTZ00440, reticulocyte binding protein 2-like protein;
Provisional.
Length = 2722
Score = 39.8 bits (93), Expect = 0.018
Identities = 205/1196 (17%), Positives = 445/1196 (37%), Gaps = 142/1196 (11%)
Query: 39 NSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQ--------------TEVPTTSTV 84
+ YD NEY + K+ F + K D + +
Sbjct: 181 KYNVRKTLYDEKFNEYKNKKEAFYNCLKNKKEDYDKKIKKINNEIRKLLKNIKCTGNMCK 240
Query: 85 RNGFELMPNVEDYNEKIRALNEEVSQLKTKE-NELHSRIEELEDKLQQKIDDEKSVSYQL 143
+ + M VE Y ++ + EL +L +K+++++ D K+ Y +
Sbjct: 241 TDTYVDM--VELYLLRVNEVPSNNYDNYLNRAKELLESGSDLINKIKKELGDNKT-IYSI 297
Query: 144 EEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESA----IAKKDEVIE 199
EI + + F ++++ K+ ++ + N +KK AK +
Sbjct: 298 NFIQEEIGDIIKRYNFHLKKIEKGKEYIKRIQNNNIPPQVKKDELKKKYFESAKHYASFK 357
Query: 200 KLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLI 259
L ++ L +KE + N D+KE++E L+ + I + +I
Sbjct: 358 FSLEMLSMLDSLLIKKEKILNNLFNK----LFGDLKEKIETLLDSEY----FISKYTNII 409
Query: 260 AK----LEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDND 315
+ L+A +KE + L + + E+K K + LK+ +L+
Sbjct: 410 SLSEHTLKAAEDVLKENSQKIADYALYSNLEIIEIKKKYDEKINELKKSINQLKTLISIM 469
Query: 316 NWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQ--LLEKEMELEEWGN 373
+ +++ + ++ QE L+ + +K + +E++
Sbjct: 470 KSFYDLIISEKDSMDSKEKKESSDSNYQEKVDELLQIINSIKEKNNIVNNNFKNIEDY-- 527
Query: 374 NDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNS 433
+ L+ E + L E + + ++ + K K + D + N
Sbjct: 528 -------YITIEGLKNEIEGLIELIKYYLQSIETLIKDEKLKRSMKNDIKNKIKYIEENV 580
Query: 434 TELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPS--------- 484
+ ++ + E + I + EEL+ +AL +KE ++E E
Sbjct: 581 DHIKDIISLNDEIDNII---QQIEELINEALFNKEKFINEKNDLQEKVKYILNKFYKGDL 637
Query: 485 ----SSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESR 540
+ L + L + S++ + L T ++ S +D +++
Sbjct: 638 QELLDELSHFLDDHKYLYHEAKSKEDLQTL-LNTSKNEYEKLEFMKSDNIDNIIKN---- 692
Query: 541 IEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQE 600
L +E + L + E + NN Q+ ++NSL+ Q T + L + +E
Sbjct: 693 ---LKKELQNLLSLKENIIKKQLNNIEQD---ISNSLN---QYTIKYNDLKSSIEEYKEE 743
Query: 601 NIELKKKLEQAVEKQKGLEEEIQQLEEDTS----ILREQLESKDQVDDSIEKTLRNEIQE 656
+L+ Q + ++ + + ++D E L+ KD + + E + N+I
Sbjct: 744 EEKLEVYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILN-KENKISNDINI 802
Query: 657 LHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQS 716
L N + L+N Y + +K E T K+ ++ L++ +
Sbjct: 803 LKENKKNNQDLLN------------------SYNILIQKLEAHTEKNDEELKQLLQKFPT 844
Query: 717 KKEELCRLLDEKNTLDNIK-VEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNN 775
+ E L EK +N + V+ +I+ N N N +N I N + + L N
Sbjct: 845 EDENLNLKELEKEFNENNQIVDNIIKDIENMNKNINIIKTLNIAINRSNSNKQLVEHLLN 904
Query: 776 AQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNH 835
NK + N L + + + +N + L+L NL+++ ++ ++ + I
Sbjct: 905 ---NKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKEKIEKQ--LSDTKINNLKM 959
Query: 836 KIQQLTQETDTLKAELVAQAES--TQLVKQEQALLAAAPVDDNIVIENQQLKQNLES-VK 892
+I++ + D K + + +L K++ D + + L + ++ +K
Sbjct: 960 QIEKTLEYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIK 1019
Query: 893 QENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKE 952
+++ ++E + LI +K EI KV + ++EK K K +D K K
Sbjct: 1020 KQHDDIIELIDKLIKEKGKEIEEKVDQYISLLEKMK---TKLSSFHFNIDIKK----YKN 1072
Query: 953 QLNKNKMAELSAMLESV-------QAENISIKQMNEELQALTETLKQTSNTHEEDRK--I 1003
K ++ L +E++ + + I IK + E + K H +K +
Sbjct: 1073 PKIKEEIKLLEEKVEALLKKIDENKNKLIEIKNKSHEHVVNADKEKNKQTEHYNKKKKSL 1132
Query: 1004 LDEYKQ---RVQELDAKLAEEIASKTSIIQTLEIQ---------VKELQDKLRSYTHVEN 1051
YKQ ++EL+ E+I + +EI+ V+++ ++ + +
Sbjct: 1133 EKIYKQMEKTLKELENMNLEDITLNE--VNEIEIEYERILIDHIVEQINNEAKKSKTIME 1190
Query: 1052 ELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQE 1111
E+ Y+ + +Q++ + ER + FE N D T ++T A +
Sbjct: 1191 EIESYKKDI---DQVKKNMSKERNDHLTTFEY--NAYYDKATASYENIEELTTEAKGLKG 1245
Query: 1112 LGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLE 1167
+ L+ K ++ +Q+ +N ++N L +++ + + S ++ +L+
Sbjct: 1246 EANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALHEIKNMYEFLISIDSEKILK 1301
Score = 33.3 bits (76), Expect = 1.7
Identities = 188/1100 (17%), Positives = 405/1100 (36%), Gaps = 147/1100 (13%)
Query: 70 SDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKL 129
+N +V + FE + + + L+ S L KE L++ +L L
Sbjct: 329 QNNNIPPQVKKDELKKKYFESAKHYASFKFSLEMLSMLDSLLIKKEKILNNLFNKLFGDL 388
Query: 130 QQKIDDEKSVSYQLEEKAIEISQLTEH-------------------NRFLQEEMQSLK-- 168
++KI+ S K I L+EH + E+ +K
Sbjct: 389 KEKIETLLD-SEYFISKYTNIISLSEHTLKAAEDVLKENSQKIADYALYSNLEIIEIKKK 447
Query: 169 --DKLRDLDENV--------TVEDIKKANESAIAKKDEVIEKLKA---ELESVEKALREK 215
+K+ +L +++ ++ S D +K + E V++ L+
Sbjct: 448 YDEKINELKKSINQLKTLISIMKSFYDLIISEKDSMDSKEKKESSDSNYQEKVDELLQII 507
Query: 216 ESEVEEWGN-NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKE 274
S E+ N+ + +D +E L E + LIE+I+ + I L E+ +
Sbjct: 508 NSIKEKNNIVNNNFKNIEDYYITIEGLKNEIEGLIELIKYYLQSIETL-----IKDEKLK 562
Query: 275 AEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENE 334
+M ++K+K++ +E ++ + + + DN E EAL + +
Sbjct: 563 R---------SMKNDIKNKIKYIEENVDHIKDIISLNDEIDNIIQQIEELINEALFNKEK 613
Query: 335 EIKEKLAKQESTLAKLKT-HSESLQKQLLEKEMELEE----WGNNDSWGGDNDKLATLQQ 389
I EK QE L + LQ+ L E L++ + S L T +
Sbjct: 614 FINEKNDLQEKVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEAKSKEDLQTLLNTSKN 673
Query: 390 ENKVLNEKVS------------ELQTQLLSVEEALKKKENDLE-DWGEGDDWGTGNSTEL 436
E + L S ELQ L E +KK+ N++E D + T +L
Sbjct: 674 EYEKLEFMKSDNIDNIIKNLKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDL 733
Query: 437 NNLRAKCSEFEKTIVELKSQEELLKQALIDKENE---------------LSEWGQTNEWG 481
+ + E E+ + K Q K I E L
Sbjct: 734 KSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDKDLPDGKNTYEEFLQYKDTILNKE 793
Query: 482 SPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRI 541
+ S+D+N L+E + L+ ++I KL+ E + Q+ + +
Sbjct: 794 NKISNDINILKENKKNNQDLLNSYNILIQKLEAHTEK----NDEELKQLLQKFPTEDENL 849
Query: 542 EMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLD---EEVTVLS 598
+ E E I +N +++ + MN +++ L R + + V L
Sbjct: 850 NLKELEKEFNENN------QIVDNIIKDIENMNKNINIIKTLNIAINRSNSNKQLVEHLL 903
Query: 599 QENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELH 658
I+LK KLEQ ++ + D I + + ++ L E +++
Sbjct: 904 NNKIDLKNKLEQ----------HMKIINTDNIIQKNEKL-------NLLNNLNKEKEKIE 946
Query: 659 AKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKK 718
+L + +N +++ + Y++ KE + K+ + + +
Sbjct: 947 KQLSD--TKINNLKMQIEKTLEYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIDKLN 1004
Query: 719 EELCRLLDEKNTLDNIKVEKENLEIQLDNL----NTNYQDKINTLIQSKNDLEAKISELN 774
L K D IK + +++ +D L ++K++ I ++ K+S +
Sbjct: 1005 VNYNIL--NKKIDDLIKKQHDDIIELIDKLIKEKGKEIEEKVDQYISLLEKMKTKLSSFH 1062
Query: 775 NAQHNKNNEINDLNKRISLFEENNAFLQRSILD-----------LERNLDEKLKEFNEKE 823
K + + + I L EE L + I + ++ KE N++
Sbjct: 1063 FNIDIKKYKNPKIKEEIKLLEEKVEALLKKIDENKNKLIEIKNKSHEHVVNADKEKNKQT 1122
Query: 824 ISYN---ENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIE 880
YN +++E ++++ +E + + E + E ++ + + +L D+IV +
Sbjct: 1123 EHYNKKKKSLEKIYKQMEKTLKELENMNLEDITLNEVNEIEIEYERILI-----DHIVEQ 1177
Query: 881 NQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTEL--SIIMEKCKQYEDKCIELE 938
+ +++ +E +++ + E N +T + +K + EL
Sbjct: 1178 INNEAKKSKTIMEEIESYKKDIDQVKKNMSKERNDHLTTFEYNAYYDKATASYENIEELT 1237
Query: 939 STLDAKLTDFSTKEQLNKNKM--AELSAMLESVQAENISIKQMNEELQALTETLKQTSNT 996
+ + + +++ K ++ + L+ V EN ++ E++ + E L S
Sbjct: 1238 TEAKGLKGEANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALHEIKNMYEFL--ISID 1295
Query: 997 HEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQY 1056
E+ K + ++ +E +E+ ++I+ +E ++++ ++ ++ + E Q
Sbjct: 1296 SEKILKEILNSTKKAEEFSNDAKKELEKTDNLIKQVEAKIEQAKEH-KNKIYGSLEDKQI 1354
Query: 1057 RSKVYELEQIQARLEAERTQ 1076
++ ++EQI+ + +R +
Sbjct: 1355 DDEIKKIEQIKEEISNKRKE 1374
>gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria
with the myosin-like domain [Function unknown].
Length = 499
Score = 39.2 bits (91), Expect = 0.019
Identities = 37/221 (16%), Positives = 83/221 (37%), Gaps = 19/221 (8%)
Query: 487 DLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSR 546
L LR E G + + + +++L+ A+Q + + Q+ + L+R
Sbjct: 82 QLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAKAQQELAR 141
Query: 547 ---ENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIE 603
+ + L+TR++ L ++ + + L A +++L T L + ++
Sbjct: 142 LTKQAQDLQTRLKTL--------AEQRRQLEAQAQS---LQASQKQLQASATQLKSQVLD 190
Query: 604 LKKKLEQAVEKQKGL---EEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAK 660
LK + Q ++ + L Q E+ + + Q + + + Q++ A+
Sbjct: 191 LKLRSAQIEQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAAR 250
Query: 661 LINVEALVNQAQVEKQALDGKYEELK--EKYEQMSEKFENQ 699
+ Q Q + A +E+ E Y Q + Q
Sbjct: 251 AEQIRERERQLQRLETAQARLEQEVAQLEAYYQAYVRLRQQ 291
Score = 38.9 bits (90), Expect = 0.026
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Query: 1057 RSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMK 1116
RS V++L+ I+ +L A RT+ K ++ + V QEL +
Sbjct: 70 RSGVFQLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAAR 129
Query: 1117 NQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKL 1176
+ + E L KQ Q+ L+ L++L + +++ SL + L +
Sbjct: 130 QNLAKAQQELARLTKQAQD-------LQTRLKTLAEQRRQLEAQAQSLQASQKQLQASAT 182
Query: 1177 TLEAQLKELADNETQYKQMQIVYEDTQ---RKLNEELARRDATIATLNTTGAPDLNASIE 1233
L++Q+ +L Q +Q + EELARR A A T A +
Sbjct: 183 QLKSQVLDLKLRSAQIEQEAQNLATRANAAQARTEELARRAA--AAQQTAQAIQQRDAQI 240
Query: 1234 NILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELR 1282
+ ++ A +E +++ E + + L+ QA LE+ +++ + + + LR
Sbjct: 241 SQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQLEAYYQAYVRLR 289
Score = 38.1 bits (88), Expect = 0.042
Identities = 31/177 (17%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 1556 SELVKAEQTIQDLHVKLREAEERVKSSATAYTSAS---VRSNQQVEALTSQVKSLTEQKE 1612
+E A +Q + + + ++ A R +Q + L +++K+L EQ+
Sbjct: 102 TEREAARSELQKARQEREAVRQELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRR 161
Query: 1613 KLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELT 1672
+L+ + + ++ QAS T L+ + + +I Q + L N + A+ EL
Sbjct: 162 QLEAQAQSLQASQKQLQASATQLKSQVLDLKLRSA-QIEQEAQNLATRANAAQARTEELA 220
Query: 1673 QLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
+ + Q Q ++ + + + Q+ +++ I+E ++ +L + E ++ +
Sbjct: 221 RRAAAAQQTAQAIQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQ 277
Score = 36.5 bits (84), Expect = 0.14
Identities = 37/202 (18%), Positives = 80/202 (39%), Gaps = 1/202 (0%)
Query: 875 DNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKC 934
D+I + + L+ L + + E E + + + + + + +Q K
Sbjct: 77 DDIRPQLRALRTELGTAQGEKR-AAETEREAARSELQKARQEREAVRQELAAARQNLAKA 135
Query: 935 IELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTS 994
+ + L + D T+ + + +L A +S+QA ++ +L++ LK S
Sbjct: 136 QQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKLRS 195
Query: 995 NTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELG 1054
E++ + L Q +LA A+ Q ++ + ++ K + ++
Sbjct: 196 AQIEQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAARAEQIR 255
Query: 1055 QYRSKVYELEQIQARLEAERTQ 1076
+ ++ LE QARLE E Q
Sbjct: 256 ERERQLQRLETAQARLEQEVAQ 277
Score = 35.8 bits (82), Expect = 0.25
Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 26/229 (11%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQ 641
+ + L E+ E + + E A + + +E + + ++ + R+ L Q
Sbjct: 78 DIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAKAQQ 137
Query: 642 VDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTG 701
L + Q+L +L + Q + + Q+L ++L+ Q+ +
Sbjct: 138 ----ELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQ-VLDLK 192
Query: 702 KDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
S I+ +NL ++ + +L Q Q
Sbjct: 193 LRSAQIEQEAQNLATRANAA-----------------QARTEELARRAAAAQ----QTAQ 231
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLER 810
+ +A+IS+ + +I + +++ E A L++ + LE
Sbjct: 232 AIQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQLEA 280
Score = 32.7 bits (74), Expect = 2.2
Identities = 44/233 (18%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 85 RNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLE 144
RN + ++D ++RAL E+ + ++ + E +LQ+ + ++V +L
Sbjct: 67 RNLRSGVFQLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELA 126
Query: 145 E------KAI-EISQLTEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAIAKKDE 196
KA E+++LT+ + LQ +++L ++ R L+ +++ +K +++ +
Sbjct: 127 AARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKS 186
Query: 197 VIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHE 256
+ LK +E+ + + A+ EEL + Q+ + IQ +
Sbjct: 187 QVLDLKLRSAQIEQEAQNLATRAN---------AAQARTEELARRAAAAQQTAQAIQQRD 237
Query: 257 TLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
I +K +++ + EQ + ++ET +A L+Q+ +LE
Sbjct: 238 AQI-----------SQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQLE 279
Score = 31.5 bits (71), Expect = 4.3
Identities = 43/232 (18%), Positives = 90/232 (38%), Gaps = 21/232 (9%)
Query: 444 SEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLS 503
SE +K E ++ + L A + E + + + L TL E+ R++L
Sbjct: 109 SELQKARQEREAVRQELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQ----RRQLE 164
Query: 504 EQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIE 563
Q + + QL+A+ + QV D + R + +E + L TR
Sbjct: 165 AQAQSLQASQKQLQASAT-------QLKSQVLDLKLRSAQIEQEAQNLATRANA------ 211
Query: 564 NNYVQESDPMNNSLDNTAQLTAEK-ERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEI 622
Q AQ TA+ ++ D +++ +Q+ +++ + + + LE
Sbjct: 212 ---AQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQ 268
Query: 623 QQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVE 674
+LE++ + L ++ ++ T R ++ A+ + QAQ +
Sbjct: 269 ARLEQEVAQLEAYYQAYVRLRQQAAATQRGQVLAGAAQRVAQAQAQAQAQAQ 320
Score = 31.1 bits (70), Expect = 5.9
Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 6/242 (2%)
Query: 621 EIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDG 680
++ + LR +L + + E EL EA+ + +Q L
Sbjct: 75 QLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAK 134
Query: 681 KYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLD----NIKV 736
+EL +Q ++ + + + L QS + +L L ++K+
Sbjct: 135 AQQELARLTKQ-AQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKL 193
Query: 737 EKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEE 796
+E + NL T + + A + A ++ +I+ ++I+ E
Sbjct: 194 RSAQIEQEAQNLATR-ANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAARAE 252
Query: 797 NNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAE 856
+R + LE +E + E Y + + A+ VAQA+
Sbjct: 253 QIRERERQLQRLETAQARLEQEVAQLEAYYQAYVRLRQQAAATQRGQVLAGAAQRVAQAQ 312
Query: 857 ST 858
+
Sbjct: 313 AQ 314
Score = 31.1 bits (70), Expect = 6.9
Identities = 42/244 (17%), Positives = 84/244 (34%), Gaps = 34/244 (13%)
Query: 830 IEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLE 889
+ A ++ E + E A Q +QE+ + E +QNL
Sbjct: 83 LRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQ---------ELAAARQNLA 133
Query: 890 SVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFS 949
+QE + + Q+L ++ L+ + + + L A T
Sbjct: 134 KAQQELARLTKQAQDL--------QTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLK 185
Query: 950 TKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQ 1009
++ K + A++ +++ + + EEL +QT+ Q
Sbjct: 186 SQVLDLKLRSAQIEQEAQNLATRANAAQARTEELARRAAAAQQTA--------------Q 231
Query: 1010 RVQELDAK---LAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQI 1066
+Q+ DA+ A++IA++ I+ E Q++ L+ +L Y L Q
Sbjct: 232 AIQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQLEAYYQAYVRLRQQ 291
Query: 1067 QARL 1070
A
Sbjct: 292 AAAT 295
Score = 30.8 bits (69), Expect = 9.5
Identities = 35/219 (15%), Positives = 83/219 (37%), Gaps = 26/219 (11%)
Query: 650 LRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDT 709
+R +++ L +L + A+ E++A + ++ +++ E + ++ +
Sbjct: 79 IRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQE-----------LAA 127
Query: 710 LIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAK 769
+NL ++EL RL + ++L+ +L L + L L+A
Sbjct: 128 ARQNLAKAQQELARL----------TKQAQDLQTRLKTLAEQRRQ----LEAQAQSLQAS 173
Query: 770 ISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNEN 829
+L + +++ DL R + E+ L + E+L +
Sbjct: 174 QKQLQASATQLKSQVLDLKLRSAQIEQEAQNLATRANAAQ-ARTEELARRAAAAQQTAQA 232
Query: 830 IEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALL 868
I+ + +I Q Q+ ++ + Q ++ QA L
Sbjct: 233 IQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQARL 271
>gnl|CDD|150420 pfam09744, Jnk-SapK_ap_N, JNK_SAPK-associated protein-1. This is
the N-terminal 200 residues of a set of proteins
conserved from yeasts to humans. Most of the proteins in
this entry have an RhoGEF pfam00621 domain at their
C-terminal end.
Length = 158
Score = 37.4 bits (87), Expect = 0.020
Identities = 25/121 (20%), Positives = 62/121 (51%)
Query: 575 NSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILRE 634
L+N L +E + L+ E+ +L ++N L + E+ E +K E+++ + E++ ++
Sbjct: 33 RVLENLDSLASENQELEVELELLREDNERLSTQYEREKELRKQAEQKLLEFEDELEQEKK 92
Query: 635 QLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSE 694
+L+ K + + + L + + L ++ +E + + E +L +Y +L + Y + E
Sbjct: 93 ELQKKIEDLEENVRQLELKAKNLSDQVSRLEERETELKKEYNSLHERYTKLLKNYVEYVE 152
Query: 695 K 695
+
Sbjct: 153 R 153
>gnl|CDD|233227 TIGR00996, Mtu_fam_mce, virulence factor Mce family protein. Members
of this paralogous family are found as six tandem
homologous proteins in the same orientation per cassette,
in four separate cassettes in Mycobacterium tuberculosis.
The six members of each cassette represent six
subfamilies. One subfamily includes the protein mce
(mycobacterial cell entry), a virulence protein required
for invasion of non-phagocytic cells [Cellular processes,
Pathogenesis].
Length = 291
Score = 38.8 bits (91), Expect = 0.022
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 1669 NELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLM-------EELN 1721
N L + ++ QL+ + L+ L+ LN + I L + +N+++ ++L+
Sbjct: 156 NALAEALAGQGPQLRNLLDGLAQ---LTAALNARDGDIGALIDNLNRVLDVLADRSDQLD 212
Query: 1722 KKEAKLKEV-----NNGGKVDKCL-----VTNMIVNFLTAPSRPSRHQALQILASVIDMT 1771
+ L + + +D L + + + L A +RP+ QAL LA V+ +
Sbjct: 213 RLLDNLATLTAQLADRDDALDDALAALSGASAQVRDLL-AENRPNLPQALANLAPVLTLL 271
Query: 1772 PQDRQKIGLE 1781
LE
Sbjct: 272 --VDYHPELE 279
>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division
and chromosome partitioning].
Length = 420
Score = 38.9 bits (91), Expect = 0.024
Identities = 41/280 (14%), Positives = 99/280 (35%), Gaps = 24/280 (8%)
Query: 603 ELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLI 662
L+KK+ + +++ LE++++ LE + + L QL +++++L ++
Sbjct: 49 ALEKKIREQQDQRAKLEKQLKSLETEIASLEAQL-----------IETADDLKKLRKQIA 97
Query: 663 NVEALVNQAQVEKQALDGKYEELKEKYEQMSEK---FENQTGKDSVDIDTLIKNLQSKKE 719
++ A +N +V+++ + E ++ + +D+ L +
Sbjct: 98 DLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGALNP 157
Query: 720 ELCRLLDE-KNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQH 778
+D K TL + + + + L ++ + L + E
Sbjct: 158 ARAERIDALKATLKQLAAVRAEIAAEQAEL----TTLLSEQRAQQAKLAQLLEERKKTLA 213
Query: 779 NKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQ 838
N+E++ K++ N + L+ I E + + E + A +
Sbjct: 214 QLNSELSADQKKLEELRANESRLKNEIASAEAAAAKAREAAAAAEAAAARARAAEAKRTG 273
Query: 839 QLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIV 878
+ + T K + + L Q A PV I+
Sbjct: 274 ETYKPTAPEKMLISSTGGFGALRGQ-----LAWPVTGRIL 308
Score = 38.5 bits (90), Expect = 0.027
Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 45/266 (16%)
Query: 1431 VATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQERE 1490
A +KQLK + +A E+++ E ++Q + + QL+ + ++S
Sbjct: 33 AAADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIAS--------------- 77
Query: 1491 VVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKT 1550
+ E A L+ L+++ L +N L E + +Q
Sbjct: 78 ----------LEAQLIETADDLKKLRKQIADLNARLNAL---------EVQEREQRRRLA 118
Query: 1551 EEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSN-QQVEALTSQVKSLTE 1609
E+ + + + + + Y A + ++++AL + +K L
Sbjct: 119 EQLAALQRSGRNPPPA---LLVSPEDAQRSVRLAIYYGALNPARAERIDALKATLKQLAA 175
Query: 1610 QKEKL---QEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYA 1666
+ ++ Q +L + QA L L E+ + ++ L Q +L A
Sbjct: 176 VRAEIAAEQAELTTLLSEQRAQQAKLAQLLE--ERKKTLA--QLNSELSADQKKLEELRA 231
Query: 1667 KNNELTQLISTLQHQLQEARESLSAA 1692
+ L I++ + +ARE+ +AA
Sbjct: 232 NESRLKNEIASAEAAAAKAREAAAAA 257
Score = 38.5 bits (90), Expect = 0.029
Identities = 39/245 (15%), Positives = 94/245 (38%), Gaps = 11/245 (4%)
Query: 133 IDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAI 191
+ QL++ EI+ L + R Q++ L+ +L+ L+ + ++E +
Sbjct: 30 AFSAAADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDL 89
Query: 192 AKKDEVIEKLKAELESVEKALREKESEVEE---WGNNDAWGASDDVK---EELEKLVVEK 245
K + I L A L ++E RE+ + E + E+ ++ V
Sbjct: 90 KKLRKQIADLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLA 149
Query: 246 QELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKE 305
+ I L+A L ++ + + + E ++ E +++ L L++++
Sbjct: 150 IYYGALNPARAERIDALKATLKQLAAVRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERK 209
Query: 306 QELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKE 365
+ L S +++ +E L+ +K ++A E+ AK + + + +
Sbjct: 210 KTLAQLNSE----LSADQKKLEELRANESRLKNEIASAEAAAAKAREAAAAAEAAAARAR 265
Query: 366 MELEE 370
+
Sbjct: 266 AAEAK 270
Score = 36.6 bits (85), Expect = 0.11
Identities = 54/294 (18%), Positives = 97/294 (32%), Gaps = 52/294 (17%)
Query: 983 LQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDK 1042
A + LKQ K + E + + KL +++ S + I +LE Q+ E D
Sbjct: 33 AAADDKQLKQIQKEIAALEKKIREQQDQRA----KLEKQLKSLETEIASLEAQLIETADD 88
Query: 1043 LRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKI 1102
L +L + ++ + ARL A Q + L+ LQ +
Sbjct: 89 L-------KKLRK------QIADLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPAL 135
Query: 1103 THAALVEQELGEMKNQMQTLE-YEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDN 1161
LV E + ++ ++I LK L+ L
Sbjct: 136 ----LVSPEDAQRSVRLAIYYGALNPARAERIDA-------LKATLKQLAA--------- 175
Query: 1162 ASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATL- 1220
+ + + L L E + + Q+ + T +LN EL+ + L
Sbjct: 176 -----VRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELSADQKKLEELR 230
Query: 1221 -NTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQ 1273
N + + AS E A ++ + + A + +AA K E Y+
Sbjct: 231 ANESRLKNEIASAE-------AAAAKAREAAAAAEAAAARARAAEAKRTGETYK 277
Score = 36.2 bits (84), Expect = 0.15
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 320 SGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGG 379
+++I AL+K+ E +++ AK E L L+T SL+ QL+E +L++ +
Sbjct: 41 KQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADLN 100
Query: 380 DNDKLATLQQENK--VLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELN 437
+Q+ + L E+++ LQ + AL D + LN
Sbjct: 101 ARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQR----SVRLAIYYGALN 156
Query: 438 NLRAK-CSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESG 496
RA+ + T+ +L + + + LSE R +
Sbjct: 157 PARAERIDALKATLKQLAAVRAEIAAEQAELTTLLSE-----------------QRAQQA 199
Query: 497 LLRQKLSEQKVIISKLKTQLEAAQQ 521
L Q L E+K +++L ++L A Q+
Sbjct: 200 KLAQLLEERKKTLAQLNSELSADQK 224
Score = 36.2 bits (84), Expect = 0.15
Identities = 45/228 (19%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEE----KAIEISQL 153
+KIR ++ ++L+ + L + I LE +L + DD K + Q+ + Q
Sbjct: 51 EKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADLNARLNALEVQE 110
Query: 154 TEHNRFLQEEMQSLKDKLRD--LDENVTVEDIKKANESAI--AKKDEVIEKLKAELESVE 209
E R L E++ +L+ R+ V+ ED +++ AI + + L++
Sbjct: 111 REQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGALNPARAERIDALKATL 170
Query: 210 KALREKESEVEEWGNN--DAWGASDDVKEELEKLVVEKQELIE----VIQNHETLIAKLE 263
K L +E+ + +L +L+ E+++ + + + + +L
Sbjct: 171 KQLAAVRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELSADQKKLEELR 230
Query: 264 ADLTRVKEE-KEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEG 310
A+ +R+K E AE A +E + E A + E + G
Sbjct: 231 ANESRLKNEIASAE-----AAAAKAREAAAAAEAAAARARAAEAKRTG 273
Score = 33.2 bits (76), Expect = 1.6
Identities = 25/174 (14%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 1557 ELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQE 1616
+ K E+ ++ L ++ E ++ +A + +Q+ L +++ +L Q+ + +
Sbjct: 60 QRAKLEKQLKSLETEIASLEAQLIETADDLK----KLRKQIADLNARLNALEVQEREQRR 115
Query: 1617 KLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLIS 1676
+L + +Q+ +++ A++ +A L + ++
Sbjct: 116 RLAEQLAALQR-SGRNPPPALLVSPEDAQRSVRLAIYYGALNPARAERIDALKATLKQLA 174
Query: 1677 TLQHQLQEARESL-SAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
++ ++ + L + Q + +Q ++E + + QL EL+ + KL+E
Sbjct: 175 AVRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELSADQKKLEE 228
Score = 32.0 bits (73), Expect = 3.0
Identities = 42/226 (18%), Positives = 93/226 (41%), Gaps = 22/226 (9%)
Query: 866 ALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIME 925
A+LAAA + +Q+++ + +++++ + L Q + + TE++ +
Sbjct: 25 AVLAAAFSAAADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQ----LKSLETEIASLEA 80
Query: 926 KCKQYEDKCIELE---STLDAKLTDFSTKEQLNKNKMAE-LSAMLESVQAENISIKQMNE 981
+ + D +L + L+A+L +E+ + ++AE L+A+ S + ++ E
Sbjct: 81 QLIETADDLKKLRKQIADLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPE 140
Query: 982 E----------LQALTETLKQTSNTHEEDRKILDEYKQRV----QELDAKLAEEIASKTS 1027
+ AL + + + K L + + EL L+E+ A +
Sbjct: 141 DAQRSVRLAIYYGALNPARAERIDALKATLKQLAAVRAEIAAEQAELTTLLSEQRAQQAK 200
Query: 1028 IIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAE 1073
+ Q LE + K L + + +L + R+ L+ A EA
Sbjct: 201 LAQLLEERKKTLAQLNSELSADQKKLEELRANESRLKNEIASAEAA 246
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor
protein; Reviewed.
Length = 782
Score = 39.0 bits (92), Expect = 0.027
Identities = 26/126 (20%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 581 AQLTAEKERLDEEVTVLS-------QENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILR 633
+ +KE+L+E + L Q+ E + L++A + ++ LEE+ ++L+E+ L
Sbjct: 509 KLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLL 568
Query: 634 EQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMS 693
E+ E + Q K + E E+ +L ++ + + ++ + + L + E+
Sbjct: 569 EEAEKEAQ---QAIKEAKKEADEIIKELRQLQKGGYASVKAHELIEAR-KRLNKANEKKE 624
Query: 694 EKFENQ 699
+K + Q
Sbjct: 625 KKKKKQ 630
Score = 35.6 bits (83), Expect = 0.35
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 256 ETLIAKLEADLTRVKEEKEAEVSGKL-EQDAMVKELKSKVETLEASLKQKEQELEGWTDN 314
LIA LE L R E+K E L E + + +EL+ K E L+ + +E E
Sbjct: 519 NELIASLEE-LERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAE----- 572
Query: 315 DNWGSSGNEQDIEALKKENEE-IKEKLAKQESTLAKLKTH-SESLQKQLLEKEMELEE 370
+Q I+ KKE +E IKE Q+ A +K H +K+L + + E+
Sbjct: 573 -----KEAQQAIKEAKKEADEIIKELRQLQKGGYASVKAHELIEARKRLNKANEKKEK 625
Score = 33.6 bits (78), Expect = 1.3
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 40/179 (22%)
Query: 174 LDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDD 233
L EN+ I++A + I + E + +L A LE +E+ L +K E E
Sbjct: 499 LPENI----IEEAKKL-IGEDKEKLNELIASLEELERELEQKAEEAEA------------ 541
Query: 234 VKEELEKLVVEKQELIEVIQNHE-TLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKS 292
+ +E EKL E +E E +Q E L+ + E KE ++A K E D ++KEL+
Sbjct: 542 LLKEAEKLKEELEEKKEKLQEEEDKLLEEAE------KEAQQAIKEAKKEADEIIKELRQ 595
Query: 293 KVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLK 351
+ AS K EL + + L K NE+ ++K KQ+ +LK
Sbjct: 596 LQKGGYAS--VKAHEL--------------IEARKRLNKANEKKEKKKKKQKEKQEELK 638
Score = 32.5 bits (75), Expect = 2.7
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 1604 VKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNN 1663
+ SL E + +L++K +AE ++++ + L+ E+ Q E+D + ++ + Q +
Sbjct: 522 IASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQAIKE 581
Query: 1664 SYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKK 1723
AK E ++I L+ + + K+ + E +++N+ E+ KK
Sbjct: 582 --AK-KEADEIIKELRQLQKG------------GYASVKAHELIEARKRLNKANEKKEKK 626
Query: 1724 EAKLKEVNNGGKV 1736
+ K KE KV
Sbjct: 627 KKKQKEKQEELKV 639
>gnl|CDD|218661 pfam05622, HOOK, HOOK protein. This family consists of several
HOOK1, 2 and 3 proteins from different eukaryotic
organisms. The different members of the human gene
family are HOOK1, HOOK2 and HOOK3. Different domains
have been identified in the three human HOOK proteins,
and it was demonstrated that the highly conserved
NH2-domain mediates attachment to microtubules, whereas
the central coiled-coil motif mediates homodimerisation
and the more divergent C-terminal domains are involved
in binding to specific organelles (organelle-binding
domains). It has been demonstrated that endogenous HOOK3
binds to Golgi membranes, whereas both HOOK1 and HOOK2
are localised to discrete but unidentified cellular
structures. In mice the Hook1 gene is predominantly
expressed in the testis. Hook1 function is necessary for
the correct positioning of microtubular structures
within the haploid germ cell. Disruption of Hook1
function in mice causes abnormal sperm head shape and
fragile attachment of the flagellum to the sperm head.
Length = 713
Score = 39.0 bits (91), Expect = 0.029
Identities = 111/515 (21%), Positives = 211/515 (40%), Gaps = 44/515 (8%)
Query: 250 EVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQD---AMVKELKSKVETLEASLKQKEQ 306
E N + + K DL +EEK+ E D +++E K+ ++ L+++
Sbjct: 165 ESAGNLDQQLKKALEDLKEAQEEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQERLA 224
Query: 307 ELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEM 366
+LEG + N S L+ + E+++E+ + E+ + E L+K+L E +
Sbjct: 225 QLEGSSLGPNQLGSKKYNL---LQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQH 281
Query: 367 ELEEWGNNDSWGGDNDKLATLQQENKVL---NEKVSELQTQLLSVEEALKKKENDLEDWG 423
ND + L+ E VL ++K +L+ Q+ E KKK DL D
Sbjct: 282 R------NDELTSLAAESQALKDEIDVLRESSDKAKKLEAQV----ETYKKKLEDLNDLR 331
Query: 424 EGDDWGTGNSTELNNLRAKCSEFEKTIVELKSQEELLKQALIDKENELS----------- 472
+ + E K + Q E K+ + + +LS
Sbjct: 332 RQVKLLEERNAMYMQNTVQLEEELKKANAARGQLETYKRQVQELHAKLSEESKKADKLEF 391
Query: 473 EWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQ 532
E+ + E + L E LR+ E + ++ + QL A GTS +
Sbjct: 392 EYKRLEEKLEALQKEKERLLAERDSLRETNEELRCGQAQ-QDQLTQADAGTSPSGDNLAA 450
Query: 533 QVQDRESR--IEMLSRENEGLRTRVE-QLGLVIE--NNYVQESDPMNNSLDNTAQLTAEK 587
++ E R + L EN+ LR E I +++++ NN L+ +L ++
Sbjct: 451 ELLPSEYREKLIRLQHENKMLRLGQEGSENERITELQQLLEDANRRNNELETQLRLANQR 510
Query: 588 ER-LDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
L ++V L + E K E + + LEE ++QL E E+L+ K + I
Sbjct: 511 ILELQQQVEDLQKALQEQGSKSEDSSLLKSKLEEHLEQLHE----ANEELQKKREQ---I 563
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVD 706
E+ ++ Q L K+ +EA + + + +A++ +Y++ EK ++ + + + S +
Sbjct: 564 EELEPDQDQNLSRKIAELEAALQKKDEDMRAMEERYKKYVEKAREVIKTLDPKQNPASPE 623
Query: 707 IDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENL 741
I L K L + + + L E ++ ++E L
Sbjct: 624 IQLLKKQLTERDKRIRHLESEYEKAKPMREQEEKL 658
Score = 35.5 bits (82), Expect = 0.30
Identities = 93/473 (19%), Positives = 174/473 (36%), Gaps = 81/473 (17%)
Query: 1273 QFEKEALELRTEDLEYK-----------LQEKEKMIQELNEMKQSFFIGDSKDSVRYSDE 1321
Q EK+ L R +L+ + QE EK+ + L +++ S + S +Y+
Sbjct: 185 QEEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQERLAQLEGSSLGPNQLGSKKYNL- 243
Query: 1322 EHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLT----L 1377
LQ E LQ E R D+ + LE+ +L + T+L
Sbjct: 244 --------LQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQHRNDELTSLAAESQA 295
Query: 1378 LQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQ 1437
L+ E+ R + + ++ T ++L L DL QV K
Sbjct: 296 LKDEIDVLRESSDKAKKLEAQVET---------------YKKKLEDLNDLRRQV----KL 336
Query: 1438 LKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVA 1497
L+ + QL E ++ + A+ QLE +R+V H
Sbjct: 337 LEERNAMYMQNTVQLEEELKKANAARGQLE------------------TYKRQVQELHAK 378
Query: 1498 PVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSE 1557
E S++ ++L + L+E+ L E L +++L NE L+ +
Sbjct: 379 LSEESKKADKLEFEYKRLEEKLEALQKEKERLLAERDSLRETNEELR----------CGQ 428
Query: 1558 LVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEK 1617
+ + T D + A + R +++ L + K L +E E
Sbjct: 429 AQQDQLTQADAG-----TSPSGDNLAAELLPSEYR--EKLIRLQHENKMLRLGQEG-SEN 480
Query: 1618 LYQAEDVVQKHQASLTNLQIVLEQ-FQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLIS 1676
E A+ N ++ + ++ E+ Q +E LQ L +K+ + + L S
Sbjct: 481 ERITELQQLLEDANRRNNELETQLRLANQRILELQQQVEDLQKALQEQGSKSEDSSLLKS 540
Query: 1677 TLQHQLQEARESLSAAGRLSDQLNQKSQTI-QELTEKVNQLMEELNKKEAKLK 1728
L+ L++ E+ + +Q+ + Q L+ K+ +L L KK+ ++
Sbjct: 541 KLEEHLEQLHEANEELQKKREQIEELEPDQDQNLSRKIAELEAALQKKDEDMR 593
Score = 35.2 bits (81), Expect = 0.38
Identities = 93/452 (20%), Positives = 185/452 (40%), Gaps = 58/452 (12%)
Query: 1321 EEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQS 1380
+E++Q++ L+ ES+Q+ V+ + E+ + KE + + + Q+ L L+
Sbjct: 129 QEYIQQIMTLE---ESVQHVVMTAIQELMS-KEQGSSPSR-ESAGNLDQQLKKALEDLKE 183
Query: 1381 ELAEQRTLNQ---QLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQ 1437
E+ L Q +L + V E N+ QE +L L++ +
Sbjct: 184 AQEEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQERLAQLEGSSLGPNQLGSKKYNL 243
Query: 1438 LKTTSETLATKERQLAETKEQLSLAQSQLE-EVTQLMSSNDRPEADGEPAQEREVVAQHV 1496
L++ E L + +L ++ + +LE E+ +L ND E
Sbjct: 244 LQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQHRND------ELTSLAAESQALK 297
Query: 1497 APVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEED--- 1553
++ RE ++ A +L+ E L ++NDLR L N Q+ ++ EE+
Sbjct: 298 DEIDVLRESSDKAKKLEAQVETYKKKLEDLNDLRRQVKLLEERNAMYMQNTVQLEEELKK 357
Query: 1554 ---NTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQ 1610
+L ++ +Q+LH KL E ++ Y R +++EAL + + L +
Sbjct: 358 ANAARGQLETYKRQVQELHAKLSEESKKADKLEFEYK----RLEEKLEALQKEKERLLAE 413
Query: 1611 KEKLQE--------KLYQAEDVVQKHQASLT-----------NLQIVLEQFQAE------ 1645
++ L+E + Q + S + + L + Q E
Sbjct: 414 RDSLRETNEELRCGQAQQDQLTQADAGTSPSGDNLAAELLPSEYREKLIRLQHENKMLRL 473
Query: 1646 -KDNEIAQSLEFLQGELNNSYAKNNEL-------TQLISTLQHQLQEARESLSAAGRLSD 1697
++ + + LQ L ++ +NNEL Q I LQ Q+++ +++L G S+
Sbjct: 474 GQEGSENERITELQQLLEDANRRNNELETQLRLANQRILELQQQVEDLQKALQEQGSKSE 533
Query: 1698 QLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
+ ++E E++++ EEL KK +++E
Sbjct: 534 DSSLLKSKLEEHLEQLHEANEELQKKREQIEE 565
Score = 34.8 bits (80), Expect = 0.49
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 1229 NASIENILKEKDATLSEMLKKSEAKDKTLQEMQAAL--EKHLSEKYQFEKEALELRTEDL 1286
+E LK+ +A ++ E + +QE+ A L E ++K +FE + LE E L
Sbjct: 348 TVQLEEELKKANAARGQL----ETYKRQVQELHAKLSEESKKADKLEFEYKRLE---EKL 400
Query: 1287 EYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSAT 1346
E +EKE+++ E +DS+R E +ELR Q + L ++
Sbjct: 401 EALQKEKERLLAE-------------RDSLR----ETNEELRCGQAQQDQLTQADAGTSP 443
Query: 1347 EIDNM---------KETITYLEQYNLQLSKSQESSTT--LTLLQSELAEQRTLNQQLVQI 1395
DN+ +E + L+ N L QE S +T LQ L + N +L
Sbjct: 444 SGDNLAAELLPSEYREKLIRLQHENKMLRLGQEGSENERITELQQLLEDANRRNNEL--- 500
Query: 1396 VNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAET 1455
T+ +Q IL L + + L++ G + + L QL E
Sbjct: 501 ----ETQLRLANQRILELQQQVEDLQKALQEQGSK----SEDSSLLKSKLEEHLEQLHEA 552
Query: 1456 KEQLSLAQSQLEEVTQLMSSN 1476
E+L + Q+EE+ N
Sbjct: 553 NEELQKKREQIEELEPDQDQN 573
Score = 34.0 bits (78), Expect = 0.98
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 869 AAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCK 928
++P ++ +QQLK+ LE +K+ ++ +AQ+ +E++ +V L +
Sbjct: 159 GSSPSRESAGNLDQQLKKALEDLKEAQ-----EEKDELAQRCHELDKQVLLLQEEKNSLQ 213
Query: 929 QYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTE 988
Q +K E + L+ + QL K L + LE +Q EN L+A +
Sbjct: 214 QENEKLQERLAQLEGSSLGPN---QLGSKKYNLLQSQLEQLQEENF-------RLEAARD 263
Query: 989 TLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIAS---KTSIIQTLEIQVKELQDKLRS 1045
+ EE K L E + R EL LA E + + +++ + K+L+ ++ +
Sbjct: 264 DYRIKC---EELEKELAELQHRNDEL-TSLAAESQALKDEIDVLRESSDKAKKLEAQVET 319
Query: 1046 YTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHA 1105
Y +L R +V LE+ A NT+ L+ +L NA
Sbjct: 320 YKKKLEDLNDLRRQVKLLEERNA-------------MYMQNTVQ-LEEELKKANA----- 360
Query: 1106 ALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLL 1165
+ Q++T + + QEL ++ EES ++ L+ E + L++ ++ + LL
Sbjct: 361 ---------ARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRLEEKLEALQKEKERLL 411
Query: 1166 LEKNTLMET 1174
E+++L ET
Sbjct: 412 AERDSLRET 420
Score = 33.2 bits (76), Expect = 1.7
Identities = 71/319 (22%), Positives = 141/319 (44%), Gaps = 33/319 (10%)
Query: 113 TKENELHSRIEELED---KLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKD 169
K N L S++E+L++ +L+ DD + +LE++ E+ + L E Q+LKD
Sbjct: 239 KKYNLLQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQHRNDELTSLAAESQALKD 298
Query: 170 KLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVE-------KALREKESEVEEW 222
++ L E+ +A KK E + L+ +++ +E + + E E+++
Sbjct: 299 EIDVLRESSDKAKKLEAQVETYKKKLEDLNDLRRQVKLLEERNAMYMQNTVQLEEELKKA 358
Query: 223 GNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLE 282
+ +LE + QEL + KLE + R++E+ EA E
Sbjct: 359 NA---------ARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRLEEKLEALQK---E 406
Query: 283 QDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAK 342
++ ++ E S ET E + Q+ + + SG+ E L E E +L
Sbjct: 407 KERLLAERDSLRETNEELRCGQAQQDQLTQADAGTSPSGDNLAAELLPSEYREKLIRLQH 466
Query: 343 QESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQ 402
+ L + SE+ + L++ +E NN+ L+ + ++ N+++ ELQ
Sbjct: 467 ENKMLRLGQEGSENERITELQQLLEDANRRNNE-----------LETQLRLANQRILELQ 515
Query: 403 TQLLSVEEALKKKENDLED 421
Q+ +++AL+++ + ED
Sbjct: 516 QQVEDLQKALQEQGSKSED 534
Score = 31.7 bits (72), Expect = 4.5
Identities = 98/444 (22%), Positives = 176/444 (39%), Gaps = 79/444 (17%)
Query: 648 KTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDI 707
K + E EL + ++ V Q EK +L + E+L+E+ Q+ S
Sbjct: 182 KEAQEEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQERLAQLEGSSLGPNQLGSKKY 241
Query: 708 DTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLN-------------TNYQD 754
+ L L+ +EE RL + D+ +++ E LE +L L +D
Sbjct: 242 NLLQSQLEQLQEENFRLEAAR---DDYRIKCEELEKELAELQHRNDELTSLAAESQALKD 298
Query: 755 KINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE 814
+I+ L +S +D K+ K ++NDL +++ L EE NA ++ + LE E
Sbjct: 299 EIDVLRES-SDKAKKLEAQVETYKKKLEDLNDLRRQVKLLEERNAMYMQNTVQLE----E 353
Query: 815 KLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVD 874
+LK+ N + +E ++Q+L + ES + K E
Sbjct: 354 ELKKAN----AARGQLETYKRQVQELHAKLSE---------ESKKADKLE---------- 390
Query: 875 DNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKC 934
E ++L++ LE++++E + L+A++D + EL +C Q +
Sbjct: 391 ----FEYKRLEEKLEALQKEK-------ERLLAERD-SLRETNEEL-----RCGQAQQDQ 433
Query: 935 IELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIK-----QMNEELQALTET 989
+ + D E L +E L +Q EN ++ NE + L +
Sbjct: 434 LTQADAGTSPSGDNLAAELLP----SEYREKLIRLQHENKMLRLGQEGSENERITELQQL 489
Query: 990 LKQTSNTHEEDRKILDEYKQRVQELDA------KLAEEIASKTSIIQTLEIQVKELQDKL 1043
L+ + + E L QR+ EL K +E SK+ L+ +L++ L
Sbjct: 490 LEDANRRNNELETQLRLANQRILELQQQVEDLQKALQEQGSKSEDSSLLK---SKLEEHL 546
Query: 1044 RSYTHVENELGQYRSKVYELEQIQ 1067
EL + R ++ ELE Q
Sbjct: 547 EQLHEANEELQKKREQIEELEPDQ 570
>gnl|CDD|223571 COG0497, RecN, ATPase involved in DNA repair [DNA replication,
recombination, and repair].
Length = 557
Score = 38.3 bits (90), Expect = 0.035
Identities = 42/213 (19%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 102 RALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQ 161
+ E+ L+ KE E R + L+ +L+ ++++ + EE E +L+ + L
Sbjct: 167 KQARRELEDLQEKERERAQRADLLQFQLE-ELEELNLQPGEDEELEEERKRLSNSEK-LA 224
Query: 162 EEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
E +Q+ + L D+ V+ + A+ + + +L + + L E E+EE
Sbjct: 225 EAIQNALELLSGEDDTVSALSLLGRALEALED----LSEYDGKLSELAELLEEALYELEE 280
Query: 222 WGNNDAWGASDDVKEELEKLVVEKQELIEV---IQNHETLIAKLEADLTRVKE---EKEA 275
AS++++ L++L + L EV + ++L K + + E + +
Sbjct: 281 --------ASEELRAYLDELEFDPNRLEEVEERLFALKSLARKYGVTIEDLLEYLDKIKE 332
Query: 276 EVSGKLEQDAMVKELKSKVETLEASLKQKEQEL 308
E++ + ++ L+ +V+ L+A L + + L
Sbjct: 333 ELAQLDNSEESLEALEKEVKKLKAELLEAAEAL 365
Score = 38.3 bits (90), Expect = 0.040
Identities = 55/298 (18%), Positives = 115/298 (38%), Gaps = 61/298 (20%)
Query: 1431 VATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQERE 1490
+ K L + + E ++ L Q QLEE+ +L N +P D E +ER+
Sbjct: 159 YQEAYQAWKQARRELEDLQEKERERAQRADLLQFQLEELEEL---NLQPGEDEELEEERK 215
Query: 1491 VVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKT 1550
++ +LA +QN E L E++ +
Sbjct: 216 RLSNS----------EKLAEAIQNALE-----------------LLSGEDDTVSA----- 243
Query: 1551 EEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQ 1610
++A + + + KL E E + A S ++ A +++ +
Sbjct: 244 -LSLLGRALEALEDLSEYDGKLSELAELL---EEALYELEEASE-ELRAYLDELEFDPNR 298
Query: 1611 KEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNE 1670
E+++E+L+ + + +K+ ++ +L L++ + E L+NS
Sbjct: 299 LEEVEERLFALKSLARKYGVTIEDLLEYLDKIKEELAQ------------LDNSEESLEA 346
Query: 1671 LTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLK 1728
L + + L+ +L EA E+LSA + + +EL ++V ++ L ++A+
Sbjct: 347 LEKEVKKLKAELLEAAEALSAIRK---------KAAKELEKEVTAELKALAMEKARFT 395
Score = 33.0 bits (76), Expect = 1.8
Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 34/247 (13%)
Query: 648 KTLRNEIQELHAKLINVEALVN--QAQVEK-QALD---GKYEELKEKYEQMSEKFENQTG 701
K R E+++L K + Q Q+E+ + L+ G+ EEL+E+ +++S
Sbjct: 167 KQARRELEDLQEKERERAQRADLLQFQLEELEELNLQPGEDEELEEERKRLSNS------ 220
Query: 702 KDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQ 761
+ L + +Q+ E L D + L + E LE L + + L +
Sbjct: 221 ------EKLAEAIQNALELLSGEDDTVSALSLLGRALEALE-DLSEYDGKLSELAELLEE 273
Query: 762 SKNDLEAKISELNNAQHNKN---NEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKE 818
+ +LE EL N + ++ +R+ L+ +++ L+
Sbjct: 274 ALYELEEASEELRAYLDELEFDPNRLEEVEERLFA-------LKSLARKYGVTIEDLLEY 326
Query: 819 FNEKEISYNENIEASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIV 878
++ + ++ S ++ L +E LKAEL+ AE L + AA ++ +
Sbjct: 327 LDKIKEEL-AQLDNSEESLEALEKEVKKLKAELLEAAE--ALSAIRKK--AAKELEKEVT 381
Query: 879 IENQQLK 885
E + L
Sbjct: 382 AELKALA 388
>gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC. All proteins in this family for
which functions are known are part of an exonuclease
complex with sbcD homologs. This complex is involved in
the initiation of recombination to regulate the levels of
palindromic sequences in DNA. This family is based on the
phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis,
Stanford University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 1042
Score = 38.8 bits (90), Expect = 0.037
Identities = 117/754 (15%), Positives = 254/754 (33%), Gaps = 45/754 (5%)
Query: 981 EELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQ 1040
L T+ + + R Q L + Q LE ++K L+
Sbjct: 173 FPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLR 232
Query: 1041 DKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNA 1100
+ L+ L Q R E + Q L+ R + I E + L + Q +++
Sbjct: 233 EALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRAR-IEELRAQEAVLEETQERIN-RAR 290
Query: 1101 KITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSD 1160
K A + + +++ Q Q + E Q ++ + + + S+++ ++++
Sbjct: 291 KAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTL 350
Query: 1161 NASLLLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQR-----KLNEELARRDA 1215
++ + ++ E ++ + + Q TQ+ K + L R A
Sbjct: 351 HSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQA 410
Query: 1216 TIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFE 1275
TI T S L+ + A K+ E + + + AA+ + +
Sbjct: 411 TIDTRT---------SAFRDLQGQLAHAK---KQQELQQRYAELCAAAITCTAQCEKLEK 458
Query: 1276 KEALEL--RTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLM 1333
E ++ E +LQ KE++ + K + EL+E
Sbjct: 459 IHLQESAQSLKEREQQLQTKEQIHLQETRKKA-------------VVLARLLELQEEPCP 505
Query: 1334 NESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLV 1393
+ +IDN +++ ++ + S + + +QR ++ +
Sbjct: 506 LCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQM 565
Query: 1394 QIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLA 1453
Q + + L +L+DL +++ E L L K Q
Sbjct: 566 QEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRK-LQPE 624
Query: 1454 ETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVET-SRERNELALR- 1511
+ + + L Q + L + + A + + +LAL+
Sbjct: 625 QDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQK 684
Query: 1512 LQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVK 1571
+Q+ +E+ T + + L E + + E ++S L+
Sbjct: 685 MQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQS 744
Query: 1572 LREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQAS 1631
L+E + ++ A T A +N++V A L+ ++Q E+
Sbjct: 745 LKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTH----L 800
Query: 1632 LTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSA 1691
L L+ + Q ++ + E L E ++ E + + + HQL + E
Sbjct: 801 LKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECS-- 858
Query: 1692 AGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEA 1725
+ QL Q+ I +L++K+N + + + +
Sbjct: 859 --KQLAQLTQEQAKIIQLSDKLNGINQIKIQFDG 890
Score = 36.5 bits (84), Expect = 0.19
Identities = 87/676 (12%), Positives = 222/676 (32%), Gaps = 37/676 (5%)
Query: 807 DLERNLDEKLKEFNEKEISYNENIEASNHK------IQQLTQETDTLKAELVAQAESTQL 860
++L E L++ + + EA + ++QL + L+A+ E+ +
Sbjct: 226 KELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQER 285
Query: 861 VKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNL--IAQKDYEINAKVT 918
+ + + A + QQ ++ ++ + + L ++ I +
Sbjct: 286 INRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRR 345
Query: 919 ELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQ 978
L + + D S + + + ++ + + L
Sbjct: 346 LLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHT--LQQQKTTLTQKLQSLCKELD 403
Query: 979 MNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKE 1038
+ + QA +T + + ++ Q A I + +I ++E
Sbjct: 404 ILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQE 463
Query: 1039 LQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTY 1098
L+ Q + + + E + + + +D
Sbjct: 464 SAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNP 523
Query: 1099 NAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMK 1158
EQ +++ + + ++ KQ LK ++Q +Q +FS++
Sbjct: 524 GPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRAS-------LKEQMQEIQQSFSILT 576
Query: 1159 SDNASLLLEKNTLMETKLTLEAQLKELADNETQYK-QMQIVYEDTQRKLN-EELARRDAT 1216
+ + L + L+ ++L++ E + + Q + + +++
Sbjct: 577 QCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQ 636
Query: 1217 IATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEK 1276
+ L+A + +E+ + ++ + +++ + E+ + K
Sbjct: 637 CSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWK 696
Query: 1277 EALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNES 1336
E L L E+ +E NE++ + S + ++ Q L+EL
Sbjct: 697 EMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSD--LAAREDALNQSLKELM----H 750
Query: 1337 LQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIV 1396
VL++ TE N +++ + ++ L+ L +E+ L ++ ++
Sbjct: 751 QARTVLKARTEAH---------FNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLL 801
Query: 1397 NTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETK 1456
T E QEI IL+ + L Q + ++ T + + + E
Sbjct: 802 KTLEAE---IGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECS 858
Query: 1457 EQLSLAQSQLEEVTQL 1472
+QL+ + ++ QL
Sbjct: 859 KQLAQLTQEQAKIIQL 874
Score = 31.9 bits (72), Expect = 4.9
Identities = 44/219 (20%), Positives = 92/219 (42%), Gaps = 5/219 (2%)
Query: 1511 RLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHV 1570
R Q L++E L + + + L + E ++ L K + +L + ++
Sbjct: 220 RKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQL--LKQLRARIEELRAQEA 277
Query: 1571 KLREAEERV-KSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQ 1629
L E +ER+ ++ A +A +++ Q+E ++ + + K + + KL K Q
Sbjct: 278 VLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQ 337
Query: 1630 ASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESL 1689
+S+ + +L+ ++ + I + E S + + LTQ I TLQ Q + L
Sbjct: 338 SSIEEQRRLLQTLHSQ-EIHIRDAHEVATSIREIS-CQQHTLTQHIHTLQQQKTTLTQKL 395
Query: 1690 SAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLK 1728
+ + D L ++ TI T L +L + + +
Sbjct: 396 QSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQE 434
Score = 31.1 bits (70), Expect = 8.2
Identities = 88/620 (14%), Positives = 190/620 (30%), Gaps = 51/620 (8%)
Query: 1122 LEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQ 1181
+ L+ EL+ L++A + +A L +K E +L +
Sbjct: 203 SQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLT-QKREAQEEQLKKQQL 261
Query: 1182 LKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDA 1241
LK+L + + + V E+TQ ++N AR+ A +A ++ I ++
Sbjct: 262 LKQLRARIEELRAQEAVLEETQERIN--RARKAAPLA--------AHIKAVTQIEQQAQR 311
Query: 1242 TLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELN 1301
+E+ K ++ K L + A +++ S + Q E E I+E++
Sbjct: 312 IHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREIS 371
Query: 1302 EMKQSFFIGDSKDSVRYSDEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQY 1361
+ + +H+ L++ + + + + + TI
Sbjct: 372 CQQHT-------------LTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTS- 417
Query: 1362 NLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEEL 1421
+ + + +QR I T Q L E
Sbjct: 418 ----AFRDLQGQLAHAKKQQELQQRYAELCAAAITCT--------AQCEKLEKIHLQESA 465
Query: 1422 PKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEA 1481
LK+ Q+ T E+ + A +L E +E+ D P
Sbjct: 466 QSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGP 525
Query: 1482 DGEPAQERE-VVAQHVAPVETSR-ERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNE 1539
Q E AQ E + + +L+E+ + + L N +
Sbjct: 526 LTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKED 585
Query: 1540 NERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEA 1599
L+ ++ ++ + + H LR+ + ++
Sbjct: 586 IPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKL 645
Query: 1600 LTSQVKSLTEQKEKLQEKL----YQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLE 1655
LT +E+++E ++++ Q +L +Q EQ K+ +AQ
Sbjct: 646 TALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKE-MLAQCQT 704
Query: 1656 FLQGELNNSYAKNNELTQL-------ISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQE 1708
L+ + + E ++ S L + +SL + + +
Sbjct: 705 LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHF 764
Query: 1709 LTEKVNQLMEELNKKEAKLK 1728
+ + + + L
Sbjct: 765 NNNEEVTAALQTGAELSHLA 784
>gnl|CDD|233065 TIGR00634, recN, DNA repair protein RecN. All proteins in this
family for which functions are known are ATP binding
proteins involved in the initiation of recombination and
recombinational repair [DNA metabolism, DNA replication,
recombination, and repair].
Length = 563
Score = 38.6 bits (90), Expect = 0.038
Identities = 59/316 (18%), Positives = 116/316 (36%), Gaps = 36/316 (11%)
Query: 783 EINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQ 842
+++ + + LF + QR +LD +EK+K + Y ++A +++ Q
Sbjct: 130 DLHGQHDQQLLFRPDE---QRQLLDTFAGANEKVKAY---RELYQAWLKARQ-QLKDRQQ 182
Query: 843 ETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENL 902
+ + EL + + Q +E P +D + QQ NLE +++ L L
Sbjct: 183 K----EQELAQRLDFLQFQLEELEEADLQPGEDEALEAEQQRLSNLEKLRE---LSQNAL 235
Query: 903 QNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAEL 962
L D + + + L + + L S +D L + + EQ+ N + E+
Sbjct: 236 AALRGDVDVQEGSLLEGL-------GEAQL---ALASVIDGSLRELA--EQVG-NALTEV 282
Query: 963 SAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEI 1022
+Q ++ E L + E L Q + ++E V E K+ EE+
Sbjct: 283 EEATRELQNYLDELEFDPERLNEIEERLAQIKRLKRKYGASVEE----VLEYAEKIKEEL 338
Query: 1023 ASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVY-----ELEQIQARLEAERTQW 1077
++LE +E+ L R K +EQ L E+ ++
Sbjct: 339 DQLDDSDESLEALEEEVDKLEEELDKAAVALSLIRRKAAERLAKRVEQELKALAMEKAEF 398
Query: 1078 IHEFEVKTNTLSDLQT 1093
E + + + +
Sbjct: 399 TVEIKTSLPSGAKARA 414
Score = 35.1 bits (81), Expect = 0.45
Identities = 52/325 (16%), Positives = 123/325 (37%), Gaps = 68/325 (20%)
Query: 1404 NNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQ 1463
+ +++L +E++ ++L +QLK KE++LA+ + L
Sbjct: 143 PDEQRQLLDTFAGANEKVKAYRELYQAWLKARQQLKD----RQQKEQELAQRLDFLQFQL 198
Query: 1464 SQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLL 1523
+LEE + +P D E++ ++ +L+ L + L
Sbjct: 199 EELEEA------DLQPGEDEALEAEQQRLSNLE--------------KLRELSQNALAAL 238
Query: 1524 TEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSA 1583
D + + +L E L + L L + + + + ++ EA
Sbjct: 239 RGDVD--VQEGSLL---EGLGEAQLALASVIDGSLRELAEQVGNALTEVEEA-------- 285
Query: 1584 TAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQ 1643
++++ +++ E+ +++E+L Q + + +K+ AS+ + E+ +
Sbjct: 286 ----------TRELQNYLDELEFDPERLNEIEERLAQIKRLKRKYGASVEEVLEYAEKIK 335
Query: 1644 AEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKS 1703
E D L++S L + + L+ +L +A +LS R
Sbjct: 336 EELDQ------------LDDSDESLEALEEEVDKLEEELDKAAVALSLIRR--------- 374
Query: 1704 QTIQELTEKVNQLMEELNKKEAKLK 1728
+ + L ++V Q ++ L ++A+
Sbjct: 375 KAAERLAKRVEQELKALAMEKAEFT 399
Score = 32.8 bits (75), Expect = 1.9
Identities = 40/232 (17%), Positives = 84/232 (36%), Gaps = 24/232 (10%)
Query: 1517 EEKTMLLTEINDLRLNQNTLYNENERL-------KQHLLKTEEDNTSELVKAEQTIQDLH 1569
E T L +++ Q + +R +K + +KA Q ++D
Sbjct: 122 LEFTSELLDLHGQHDQQLLFRPDEQRQLLDTFAGANEKVKAYRELYQAWLKARQQLKDRQ 181
Query: 1570 VKLREAEER---VKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVV- 1625
K +E +R ++ A ++ + Q + EKL+E A +
Sbjct: 182 QKEQELAQRLDFLQFQLEELEEADLQPGEDEALEAEQQR--LSNLEKLRELSQNALAALR 239
Query: 1626 QKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEA 1685
+L L + Q + I SL L ++ N+ + E T +LQ
Sbjct: 240 GDVDVQEGSLLEGLGEAQLALASVIDGSLRELAEQVGNALTEVEEAT-------RELQNY 292
Query: 1686 RESLSAAGRLSDQLNQKSQTIQELTEK----VNQLMEELNKKEAKLKEVNNG 1733
+ L +++ ++ I+ L K V +++E K + +L ++++
Sbjct: 293 LDELEFDPERLNEIEERLAQIKRLKRKYGASVEEVLEYAEKIKEELDQLDDS 344
Score = 32.8 bits (75), Expect = 2.3
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 92 PNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI--- 148
V+ Y E +A + QLK ++ + + L D LQ ++++ + Q E
Sbjct: 158 EKVKAYRELYQAWLKARQQLKDRQQKEQELAQRL-DFLQFQLEELEEADLQPGEDEALEA 216
Query: 149 EISQLTEHNRFLQEEMQSLKDKLR---DLDENVTVEDIKKANESAIAKKDEVIEKLKAEL 205
E +L+ + L+E Q+ LR D+ E +E + +A + + + L
Sbjct: 217 EQQRLSNLEK-LRELSQNALAALRGDVDVQEGSLLEGLGEA-------QLALASVIDGSL 268
Query: 206 ESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEAD 265
+ + + +EVEE +++ L++L + + L E+ + A
Sbjct: 269 RELAEQVGNALTEVEEATR--------ELQNYLDELEFDPERLNEIEER--------LAQ 312
Query: 266 LTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
+ R+K + A V LE +KE +++ + SL+ E+E++
Sbjct: 313 IKRLKRKYGASVEEVLEYAEKIKEELDQLDDSDESLEALEEEVD 356
>gnl|CDD|163506 TIGR03794, NHLM_micro_HlyD, NHLM bacteriocin system secretion
protein. Members of this protein family are homologs of
the HlyD membrane fusion protein of type I secretion
systems. Their occurrence in prokaryotic genomes is
associated with the occurrence of a novel class of
microcin (small bacteriocins) with a leader peptide
region related to nitrile hydratase. We designate the
class of bacteriocin as Nitrile Hydratase Leader
Microcin, or NHLM. This family, therefore, is designated
as NHLM bacteriocin system secretion protein. Some but
not all NHLM-class putative microcins belong to the TOMM
(thiazole/oxazole modified microcin) class as assessed
by the presence of the scaffolding protein and/or
cyclodehydratase in the same gene clusters [Transport
and binding proteins, Amino acids, peptides and amines,
Cellular processes, Biosynthesis of natural products].
Length = 421
Score = 38.3 bits (89), Expect = 0.038
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 603 ELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLI 662
EL+++L+++ +K L+E+++++ T L+E E Q ++ L I L +L
Sbjct: 93 ELRERLQESYQKLTQLQEQLEEVRNYTGRLKEGRERHFQ---KSKEALEETIGRLREEL- 148
Query: 663 NVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELC 722
AL + ++ L K + E Q D+ D I LQ+K +E
Sbjct: 149 --AALSREVGKQRGLLSRGLATFKRDRILQQQWREEQEKYDAADKARAIYALQTKADE-- 204
Query: 723 RLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNN 782
N++ ++L L + ++ T+ + +I EL N + N N
Sbjct: 205 ---------RNLETVLQSLSQADFQLAGVAEKELETVEARIKEARYEIEELEN-KLNLNT 254
Query: 783 EI 784
I
Sbjct: 255 RI 256
Score = 32.1 bits (73), Expect = 3.0
Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 6/186 (3%)
Query: 878 VIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIEL 937
+ +L++ L+ Q+ T + E L+ + Y K + + E+ L
Sbjct: 88 RLFQPELRERLQESYQKLTQLQEQLEEVRN---YTGRLKEGRERHFQKSKEALEETIGRL 144
Query: 938 ESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTH 997
L A + + L +A Q ++ + +A QT
Sbjct: 145 REELAALSREVGKQRGLLSRGLATFKRDRILQQQWREEQEKYDAADKARAIYALQTKADE 204
Query: 998 EEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYR 1057
+L Q +L +E+ + + I+ +++EL++KL T + + Q+
Sbjct: 205 RNLETVLQSLSQADFQLAGVAEKELETVEARIKEARYEIEELENKLNLNTRI---VSQHS 261
Query: 1058 SKVYEL 1063
+V EL
Sbjct: 262 GRVIEL 267
>gnl|CDD|220173 pfam09311, Rab5-bind, Rabaptin-like protein. Members of this
family are predominantly found in Rabaptin and allow for
binding to the GTPase Rab5. This interaction is
necessary and sufficient for Rab5-dependent recruitment
of Rabaptin5 to early endosomal membranes.
Length = 180
Score = 37.0 bits (86), Expect = 0.039
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 569 ESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKG-------LEEE 621
S D +L A +++L ++ L QEN L+ +L ++ + L EE
Sbjct: 6 FSQVQEAVQDQLQELEASRQKLRAQLRRLQQENQWLRGELALTQQELQASEQEVIQLPEE 65
Query: 622 IQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEA 666
++ L+ RE+L + +E+ L++EI L N+E
Sbjct: 66 VKHLQFLCLQRREELIESRTASEHLEEELKSEIDPLKELKPNLEE 110
>gnl|CDD|224380 COG1463, Ttg2C, ABC-type transport system involved in resistance to
organic solvents, periplasmic component [Secondary
metabolites biosynthesis, transport, and catabolism].
Length = 359
Score = 37.8 bits (88), Expect = 0.045
Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 1637 IVLEQFQAEKD-NEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRL 1695
I LE+ Q D ++ L L G L+ N L + + L + L +
Sbjct: 130 IPLERTQVPIDLEDLLGDLLLLLGGLDPD-RLNAILNEAAAALAGTGPQLNALLDNLAQF 188
Query: 1696 SDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNNG--------GKVDKCLVTNM--- 1744
+D LN + I L +NQL++ L +L + + L +
Sbjct: 189 TDALNARDGDIGALIANLNQLLDSLAAASDQLDRLLDNLATLTAALAARRDALDDALAAL 248
Query: 1745 -----IVNFLTAPSRPSRHQALQILASVIDM 1770
VN L A +RP+ +QAL L + +
Sbjct: 249 SALAATVNDLLAENRPNLNQALANLRPLATL 279
Score = 35.1 bits (81), Expect = 0.32
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 12/148 (8%)
Query: 1594 NQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKD--NEIA 1651
N+ AL L + L + A + NL +L+ A D + +
Sbjct: 165 NEAAAALAGTGPQLNALLDNLAQFTDALNARDGDIGALIANLNQLLDSLAAASDQLDRLL 224
Query: 1652 QSLEFLQGELNNSYAKNN----ELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQ 1707
+L L L + L+ L +T+ L E R +L+ A L
Sbjct: 225 DNLATLTAALAARRDALDDALAALSALAATVNDLLAENRPNLNQA------LANLRPLAT 278
Query: 1708 ELTEKVNQLMEELNKKEAKLKEVNNGGK 1735
L + + L + L+ + G
Sbjct: 279 LLVDYLPGLEQLLHGLPTYAANLVGGAL 306
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton].
Length = 1463
Score = 38.5 bits (90), Expect = 0.047
Identities = 115/644 (17%), Positives = 216/644 (33%), Gaps = 88/644 (13%)
Query: 120 SRIEELEDKLQQKIDDEKS------VSYQLEEKAIEISQ-----LTEHNRFLQEEMQSLK 168
R+E E +LQ+ D KS V+ +LE + IE+ + L E+ F E + LK
Sbjct: 875 QRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLK 934
Query: 169 DKL--RDLDE----NVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEW 222
L DL+E +K E E+ + L+ +RE E
Sbjct: 935 KLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSE- 993
Query: 223 GNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETL---IAKLEADLTRVKEEKEAEVSG 279
+ K+EL +L + L E + + L +A+L++ + E
Sbjct: 994 --------LKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIL 1045
Query: 280 KLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEK 339
K Q + L + L+A K + E +D + E L K +
Sbjct: 1046 KPLQK-LKGLLLLENNQLQARYKALKLRRENSLLDDKQLY--QLESTENLLKTINVKDLE 1102
Query: 340 LAKQESTL--AKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEK 397
+ + L+ + K L +E+ + + TL+ + L+
Sbjct: 1103 VTNRNLVKPANVLQFIVAQMIKLNLLQEIS----------KFLSQLVNTLEPVFQKLSVL 1152
Query: 398 VSELQT--------QLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSEFEKT 449
EL L S E L D+ +S+E+N+L+ +
Sbjct: 1153 QLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSK 1212
Query: 450 IVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVII 509
I + + LK+ LI + +E + ++ + + +KL I
Sbjct: 1213 IFSGWPRGDKLKK-LISEGWVPTE---YSTSLKGFNNLNKKFDTPASMSNEKLLSLLNSI 1268
Query: 510 SKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQE 569
L + + ++ + + + Q + + ++ + ++
Sbjct: 1269 DNLLSSYKLEEEVLPATINSLLQYINVGLFN-ALRTKASSLRWKSATEVNY--------- 1318
Query: 570 SDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDT 629
N+ + E +DEE+ +E I+ K L+ + L+E +
Sbjct: 1319 ----NSEELDDWCREFEISDVDEEL----EELIQAVKVLQLLKDDLNKLDELLDACYSLN 1370
Query: 630 SILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKY 689
+ L+S+ D E L EI + +EAL+ KQ L E E
Sbjct: 1371 PAEIQNLKSRYDPADK-ENNLPKEILK------KIEALLI-----KQELQLSLEGKDETE 1418
Query: 690 EQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDN 733
+SE F + S+D +++ K L LL ++
Sbjct: 1419 VHLSEIFSEEKSLISLDRNSIYKEE--VLSSLSALLTKEKIALL 1460
Score = 36.6 bits (85), Expect = 0.19
Identities = 70/388 (18%), Positives = 129/388 (33%), Gaps = 38/388 (9%)
Query: 1261 QAALEKHLSEKYQFEKEALEL---RTEDLEYKLQEKEKMIQELNEM--KQSFFIGDSKDS 1315
Q L S K A + +T E KL+E E++ L Q F K
Sbjct: 800 QPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKF-GRSLKAK 858
Query: 1316 VRYSDEEH----VQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQES 1371
R+S + +Q + ++L LQ E+ I ++K LE ++L KS S
Sbjct: 859 KRFSLLKKETIYLQSAQRVELAERQLQ-ELKIDVKSISSLKLVNLELESEIIELKKSLSS 917
Query: 1372 S---TTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLG 1428
+ ++ LN ++ + ++ + L E + +DL
Sbjct: 918 DLIENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLL 977
Query: 1429 GQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQE 1488
+ L ++ + L +++LAE +Q Q +++ +L ++
Sbjct: 978 KKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQS------- 1030
Query: 1489 REVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDL--RLNQNTLYNENERLKQH 1546
A + E++ L+ LQ+ K +LL E N L R L EN L
Sbjct: 1031 ----ASKIISSESTELS-----ILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDK 1081
Query: 1547 LLKTEEDNTSEL----VKAEQTIQDLHVKLREAEERVKSSATAY--TSASVRSNQQVEAL 1600
L E + L VK + VK + + + + Q+
Sbjct: 1082 QLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNT 1141
Query: 1601 TSQVKSLTEQKEKLQEKLYQAEDVVQKH 1628
V + + L+ ++
Sbjct: 1142 LEPVFQKLSVLQLELDGLFWEANLEALP 1169
Score = 31.2 bits (71), Expect = 6.4
Identities = 57/358 (15%), Positives = 121/358 (33%), Gaps = 30/358 (8%)
Query: 566 YVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQL 625
+ L T + EK+ + E S + L +K ++++ +K L
Sbjct: 811 EYRSYLACIIKLQKT--IKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSL----L 864
Query: 626 EEDTSILREQLESKDQVDDSIEKTLRN-EIQELHAKLINVEALVNQAQVEKQALDGKYEE 684
+++T L+ + E + I L + +E+ + +++K E
Sbjct: 865 KKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEI--IELKKSLSSDLIEN 922
Query: 685 LKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQ 744
L+ K E ++ + D + E +L + ++ L E E+L +
Sbjct: 923 LEFKTELIARLKKLLNNIDLEEG--PSIEYVKLPELN-KLHEVESKLKETSEEYEDLLKK 979
Query: 745 LDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNK-------NNEINDLNKRISLFEEN 797
L N+ +++ A++S+ A E+ +L +
Sbjct: 980 STILVREGNKA-NSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSE 1038
Query: 798 NAFLQR--SILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDT---LKAELV 852
+ L + L+ L + + + + E S +QL Q T LK V
Sbjct: 1039 STELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTINV 1098
Query: 853 AQAEST--QLVKQE---QALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNL 905
E T LVK Q ++A + + ++ L Q + +++ + L
Sbjct: 1099 KDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLEL 1156
>gnl|CDD|189762 pfam00901, Orbi_VP5, Orbivirus outer capsid protein VP5.
cryoelectron microscopy indicates that VP5 is a trimer
implying that there are 360 copies of VP5 per virion.
Length = 507
Score = 37.7 bits (88), Expect = 0.054
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 165 QSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGN 224
Q L+ KL++L E +K E ++IEK +LE V K ++ E++VEE
Sbjct: 87 QGLQRKLKEL------EREQKEEEVREKHNKKIIEKFGEDLEEVYKFMK-GEAKVEE--- 136
Query: 225 NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQD 284
+ E LEK + + +++++ + +L L KE+E + E
Sbjct: 137 -----EEEKQMEILEKAL---KSYLKIVKEENKSLQRLAKALQ-----KESEERTQDET- 182
Query: 285 AMVKELKSKVETLEASLKQKEQE 307
M++E + K++ L+ ++ + E+E
Sbjct: 183 KMIEEYRDKIDALKNAI-EVEKE 204
>gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein. Members of this
protein family have a signal peptide, a strongly
conserved SH3 domain, a variable region, and then a
C-terminal hydrophobic transmembrane alpha helix region.
Length = 198
Score = 36.5 bits (85), Expect = 0.061
Identities = 23/108 (21%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 562 IENNYVQESDPMNNSLDNT----AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKG 617
+ + Y+ ++ L A+L E L E++ L QEN ELK++L + +
Sbjct: 53 VLSRYLSDTPSARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELER 112
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVE 665
L++E+ ++++ ++ E E ++ + + L+ E + L A+ ++
Sbjct: 113 LQKELARIKQLSANAIELDEENRELREELA-ELKQENEALEAENERLQ 159
Score = 36.1 bits (84), Expect = 0.090
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 949 STKEQLNK--NKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDE 1006
S +E+L + ++AEL L +Q + ++Q N+EL+ TL+ +++ + +
Sbjct: 63 SARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQ 122
Query: 1007 YKQRVQELDA---KLAEEIASKTSIIQTLEIQVKELQDKLR 1044
ELD +L EE+A + LE + + LQ+ +
Sbjct: 123 LSANAIELDEENRELREELAELKQENEALEAENERLQENEQ 163
Score = 35.4 bits (82), Expect = 0.14
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 1439 KTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAP 1498
+ E L +++LAE +E+L+ Q QL E+ Q + E A+ + +
Sbjct: 62 PSARERLPELQQELAELQEELAELQEQLAELQQENQEL-KQELSTLEAELERLQKELARI 120
Query: 1499 VETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENER 1542
+ S EL + L+EE L E L L +R
Sbjct: 121 KQLSANAIELDEENRELREELAELKQENEALEAENERLQENEQR 164
Score = 35.0 bits (81), Expect = 0.19
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 243 VEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKL-EQDAMVKELKSKVETLEASL 301
V + L + E L +L+ +L ++EE AE+ +L E +ELK ++ TLEA L
Sbjct: 53 VLSRYLSDTPSARERL-PELQQELAELQEEL-AELQEQLAELQQENQELKQELSTLEAEL 110
Query: 302 KQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQ 360
++ ++EL + L +EN E++E+LA+ + L+ +E LQ+
Sbjct: 111 ERLQKELAR--------IKQLSANAIELDEENRELREELAELKQENEALEAENERLQEN 161
Score = 34.6 bits (80), Expect = 0.24
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1638 VLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSD 1697
L + Q E E+ + L LQ +L +N EL Q +STL+ +L+ ++ L+ +LS
Sbjct: 67 RLPELQQELA-ELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSA 125
Query: 1698 QLNQKSQTIQELTEKVNQLMEELNKKEAKLKE 1729
+ + +EL E++ +L +E EA+ +
Sbjct: 126 NAIELDEENRELREELAELKQENEALEAENER 157
Score = 34.6 bits (80), Expect = 0.27
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1595 QQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSL 1654
+++ L ++ L E+ +LQE+L + + Q+ + L+ L+ LE+ Q E +
Sbjct: 66 ERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKEL-----ARI 120
Query: 1655 EFLQGELNNSYAKNNELTQLISTLQHQLQEAR 1686
+ L +N EL + ++ L+ + +
Sbjct: 121 KQLSANAIELDEENRELREELAELKQENEALE 152
Score = 33.8 bits (78), Expect = 0.51
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 1654 LEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKV 1713
L LQ EL + EL + ++ LQ + QE ++ LS ++L ++ I++L+
Sbjct: 68 LPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANA 127
Query: 1714 NQLMEE---LNKKEAKLKEVN 1731
+L EE L ++ A+LK+ N
Sbjct: 128 IELDEENRELREELAELKQEN 148
Score = 33.1 bits (76), Expect = 0.88
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 1369 QESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLG 1428
E L LQ ELAE + +L Q E + E+ RL +EL ++K L
Sbjct: 69 PELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERL----QKELARIKQLS 124
Query: 1429 GQVATLEKQLKTTSETLATKERQLAETKEQL 1459
L+++ + E LA +++ + +
Sbjct: 125 ANAIELDEENRELREELAELKQENEALEAEN 155
Score = 32.3 bits (74), Expect = 1.6
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLE---EKAIEI 150
+ + +++ L EE+++L+ + EL +EL+ +L + + + +L + +
Sbjct: 68 LPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANA 127
Query: 151 SQLTEHNRFLQEEMQSLKDKLRDL 174
+L E NR L+EE+ LK + L
Sbjct: 128 IELDEENRELREELAELKQENEAL 151
Score = 32.3 bits (74), Expect = 1.7
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 827 NENIEASNHKIQQLTQETDTLKAEL-VAQAESTQLVKQEQALLAAAPVDDNIVIENQQLK 885
E + ++ +L QE LK EL +AE +L K+ + + + EN++L+
Sbjct: 79 QEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAIELDEENRELR 138
Query: 886 QNLESVKQENTLVVENLQNLIAQKDYE 912
+ L +KQEN + + L +
Sbjct: 139 EELAELKQENEALEAENERLQENEQRR 165
Score = 31.5 bits (72), Expect = 2.7
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 1108 VEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMK--SDNASLL 1165
++QEL E++ ++ L+ + EL ++ QE + L+ EL+ LQ + +K S NA L
Sbjct: 71 LQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAIEL 130
Query: 1166 LEKNTLMETKL--------TLEAQLKELADNE 1189
E+N + +L LEA+ + L +NE
Sbjct: 131 DEENRELREELAELKQENEALEAENERLQENE 162
Score = 31.1 bits (71), Expect = 4.0
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 1500 ETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQ---HLLKTEEDN-- 1554
E E EL +L LQ+E L E++ L L E R+KQ + ++ +E+N
Sbjct: 77 ELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAIELDEENRE 136
Query: 1555 -TSELVKAEQTIQDLHVKLREAEERVK 1580
EL + +Q + L + +E +
Sbjct: 137 LREELAELKQENEALEAENERLQENEQ 163
Score = 30.4 bits (69), Expect = 6.7
Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 766 LEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEIS 825
L+ +++EL ++ +L + ++ + L+ + L++ L ++K+ + I
Sbjct: 71 LQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKEL-ARIKQLSANAIE 129
Query: 826 YNENIEASNHKIQQLTQETDTLKAELVAQAESTQL 860
+E ++ +L QE + L+AE E+ Q
Sbjct: 130 LDEENRELREELAELKQENEALEAENERLQENEQR 164
Score = 30.4 bits (69), Expect = 6.9
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 529 PVDQQVQDRESRIEMLSRENEGLRTRVEQL------GLVIENNYVQESDPMNNSLDNTAQ 582
+++ + + + L E L+ ++ +L + E + + L Q
Sbjct: 63 SARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQ 122
Query: 583 LTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQ 624
L+A LDEE L +E ELK++ E + + L+E Q+
Sbjct: 123 LSANAIELDEENRELREELAELKQENEALEAENERLQENEQR 164
Score = 30.0 bits (68), Expect = 8.8
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEIS-- 151
+ + E++ L E++++L+ + EL + LE +L++ + E + QL AIE+
Sbjct: 75 LAELQEELAELQEQLAELQQENQELKQELSTLEAELER-LQKELARIKQLSANAIELDEE 133
Query: 152 --QLTEHNRFLQEEMQSLKDKLRDLDENVTVE 181
+L E L++E ++L+ + L EN
Sbjct: 134 NRELREELAELKQENEALEAENERLQENEQRR 165
Score = 30.0 bits (68), Expect = 9.2
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 1508 LALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQD 1567
RL LQ+E L E+ +L+ L EN+ LKQ L E + L K I+
Sbjct: 64 ARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAEL-ERLQKELARIKQ 122
Query: 1568 LHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEK 1613
L E +E + Q+ EAL ++ + L E +++
Sbjct: 123 LSANAIELDEENRELREELAEL----KQENEALEAENERLQENEQR 164
Score = 30.0 bits (68), Expect = 9.3
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 41 DEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEK 100
E+ E LQ + +L+Q+ E+ + + + +L N + +E+
Sbjct: 76 AELQEELAELQEQLAELQQENQEL--KQELSTLEAELERLQKELARIKQLSANAIELDEE 133
Query: 101 IRALNEEVSQLKTKENELHSRIEELEDKLQQK 132
R L EE+++LK + L + E L++ Q++
Sbjct: 134 NRELREELAELKQENEALEAENERLQENEQRR 165
Score = 30.0 bits (68), Expect = 9.3
Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 117 ELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDE 176
EL + EL+++L + + + + +E E+S L LQ+E+ +++ L
Sbjct: 70 ELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELA----RIKQLSA 125
Query: 177 NVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVE 220
N ++ + N + + +LK E E++E + +
Sbjct: 126 N--AIELDEENRELREE----LAELKQENEALEAENERLQENEQ 163
>gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R;
Provisional.
Length = 1123
Score = 38.0 bits (89), Expect = 0.065
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 566 YVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQL 625
+V DP N L E L +++ + ++E + + E ++ LE +L
Sbjct: 134 FVPPEDPENLL----HALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAEL 189
Query: 626 EEDTSILREQLE---SKDQVDDSIEKTLRNEIQELHAKLINV 664
EE L QLE K K R EI + AK + +
Sbjct: 190 EEKQQELEAQLEQLQEKAAETSQERKQKRKEITDQAAKRLEL 231
Score = 34.2 bits (79), Expect = 0.85
Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 282 EQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLA 341
+ + ++ L+ +V TL+ L+ + +E ++ EA ++E ++ A
Sbjct: 139 DPENLLHALQQEVLTLKQQLELQAREKAQ-----------SQALAEAQQQELVALEGLAA 187
Query: 342 KQESTLAKLKTHSESLQKQLLEKEMELEE 370
+ E +L+ E LQ++ E E ++
Sbjct: 188 ELEEKQQELEAQLEQLQEKAAETSQERKQ 216
Score = 32.6 bits (75), Expect = 2.7
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 619 EEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQAL 678
E + L+++ L++QLE + + + + QEL A +E L + + ++Q L
Sbjct: 141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVA----LEGLAAELEEKQQEL 196
Query: 679 DGKYEELKEKYEQMS 693
+ + E+L+EK + S
Sbjct: 197 EAQLEQLQEKAAETS 211
>gnl|CDD|220785 pfam10498, IFT57, Intra-flagellar transport protein 57. Eukaryotic
cilia and flagella are specialised organelles found at
the periphery of cells of diverse organisms.
Intra-flagellar transport (IFT) is required for the
assembly and maintenance of eukaryotic cilia and
flagella, and consists of the bidirectional movement of
large protein particles between the base and the distal
tip of the organelle. IFT particles contain multiple
copies of two distinct protein complexes, A and B, which
contain at least 6 and 11 protein subunits. IFT57 is part
of complex B but is not, however, required for the core
subunits to stay associated. This protein is known as
Huntington-interacting protein-1 in humans.
Length = 355
Score = 37.4 bits (87), Expect = 0.068
Identities = 26/96 (27%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 1648 NEIAQSLEFLQGELNNSYAK-NNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTI 1706
E Q L+ L +L+ + K ++ L + L+ +QE RE+ ++ ++ NQ SQ +
Sbjct: 233 PETKQYLKKLSQDLSKALEKISSREKHLNNQLEQLVQEYREARRTLSQVQEKYNQASQGV 292
Query: 1707 QELTEKVNQLMEELNKKEAKLKE----VNNGGKVDK 1738
ELT ++N++ EEL + + +++E +++G + K
Sbjct: 293 SELTRELNEISEELEQVKQEMEERGASMSDGSPLVK 328
>gnl|CDD|163700 cd08069, MPN_RPN11_CSN5, Mov34/MPN/PAD-1 family: proteasomal
regulatory protein Rpn11 and signalosome complex subunit
CSN5. This family contains proteasomal regulatory
protein Rpn11 (26S proteasome regulatory subunit rpn11;
PAD1; POH1; RPN11; PSMD14; Rpn11 subunit of the
19S-proteasome; regulatory particle number 11) and
signalosomal CSN5 (COP9 signalosome complex subunit 5;
COP9 complex homolog subunit 5; c-Jun activation
domain-binding protein-1; CSN5/JAB1; JAB1). COP9
signalosome (CSN) and the proteasome lid are paralogous
complexes and their respective subunits CSN5 and Rpn11
are most closely related between the two complexes, both
containing the conserved JAMM (JAB1/MPN/Mov34
metalloenzyme) motif involved in zinc ion coordination
and providing the active site for isopeptidase activity.
Rpn11 is responsible for substrate deubiquitination
during proteasomal degradation. It is essential for
maintaining a correct cell cycle and normal mitochondrial
morphology and physiology; mutations in Rpn11 cause cell
cycle and mitochondrial defects, temperature sensitivity
and sensitivity to DNA damaging reagents such as UV. It
has been shown that the C-terminal region of Rpn11 is
involved in the regulation of the mitochondrial fission
and tubulation processes. CSN5, one of the eight subunits
of CSN, is critical for nuclear export and the
degradation of several tumor suppressor proteins,
including p53, p27, and Smad4. Its MPN+ domain is
critical for the physical interaction of RUNX3 and Jab1.
It has been suggested that the direct interaction of
CSN5/JAB1 with p27 provides p27 with a leucine-rich
nuclear export signal (NES), which is required for
binding to chromosomal region maintenance 1 (CRM1), and
facilitates nuclear export. The over-expression of
CSN5/JAB1 also has been implicated in cancer initiation
and progression, including cancer of the lung, pancreas,
mouth, thyroid, and breast, suggesting that the oncogenic
activity of CSN5 is associated with the down-regulation
of RUNX3.
Length = 268
Score = 36.8 bits (86), Expect = 0.070
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 1660 ELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEE 1719
L Y K++ +L+ L ++ +LS + L + + I +L EK+ + ++
Sbjct: 181 SLPIEYFKSSLDRKLLLNLWNKYWV--NTLSLSPLLENSNEYTIKQILDLAEKLEKAEQQ 238
Query: 1720 LNKKEAKLKEVNNGGKVDK 1738
+ + ++ N GK+DK
Sbjct: 239 EERLTGEELDIANVGKLDK 257
>gnl|CDD|237292 PRK13182, racA, polar chromosome segregation protein; Reviewed.
Length = 175
Score = 35.8 bits (83), Expect = 0.085
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 110 QLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKD 169
QL+ + N + R++ELE +LQQK DD VSYQL + E+ ++ E +Q L+
Sbjct: 89 QLEAQLNTITRRLDELERQLQQKADD--VVSYQLLQHRREMEEMLER-------LQKLEA 139
Query: 170 KLRDLDENVTVEDIKKANESAIAKK 194
+L+ L+ D + E K
Sbjct: 140 RLKKLEPIYITPDTEPTYEREKKPK 164
>gnl|CDD|237560 PRK13922, PRK13922, rod shape-determining protein MreC;
Provisional.
Length = 276
Score = 36.5 bits (85), Expect = 0.10
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 597 LSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSI 646
L +EN ELKK+L + + +E++QLE + + LRE L K+ +D
Sbjct: 74 LREENEELKKELLE----LESRLQELEQLEAENARLRELLNLKESLDYQF 119
Score = 33.4 bits (77), Expect = 0.92
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 1497 APVETSRERNELALRLQNLQEEKTMLLTEINDLR---LNQNTLYNENERLKQHLLKTEED 1553
AP E E L +L+EE L E+ +L L EN RL++ LL +E
Sbjct: 56 APREFVSGVFESLASLFDLREENEELKKELLELESRLQELEQLEAENARLRE-LLNLKES 114
Query: 1554 NTSELVKAE 1562
+ + A
Sbjct: 115 LDYQFITAR 123
Score = 30.3 bits (69), Expect = 9.9
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 384 LATLQQENKVLNEKVSELQTQLLSVEEALKKKEND 418
L L++EN+ L +++ EL+++L +E+ + EN
Sbjct: 71 LFDLREENEELKKELLELESRLQELEQL--EAENA 103
>gnl|CDD|145208 pfam01916, DS, Deoxyhypusine synthase. Eukaryotic initiation
factor 5A (eIF-5A) contains an unusual amino acid,
hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The
first step in the post-translational formation of
hypusine is catalyzed by the enzyme deoxyhypusine
synthase (DS) EC:1.1.1.249. The modified version of
eIF-5A, and DS, are required for eukaryotic cell
proliferation.
Length = 297
Score = 36.6 bits (85), Expect = 0.11
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
E++ I E++ + + KE ++ + E +L ++I+DE+SV Y + I I
Sbjct: 120 FEEWLMPIF---EKMLEEQEKEGKIWT-PSEFIHELGKEINDERSVLYWAHKNNIPIFCP 175
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKK 194
+ L + + K L ++ V DI+K N+ A + K
Sbjct: 176 ALTDGSLGDMLYFYTKKNPKLRIDI-VNDIRKINDLAFSAK 215
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis].
Length = 877
Score = 37.2 bits (87), Expect = 0.11
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 36/209 (17%)
Query: 159 FLQEEM-QSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKES 217
F+ EE+ Q L E++ + + +E I DE EK L+ + A+R +
Sbjct: 688 FITEEIWQKLPGT-----ESIHLASWPEVDEELI---DEEAEKEFELLKEIISAIRNLRA 739
Query: 218 EVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEV 277
E+ L+ ++V +EL + ++ +E I L A+L ++
Sbjct: 740 EMNLS-----------PSAPLKVVLVGSEELEDRLEANEDDIKGL-ANLEELEILSPDPE 787
Query: 278 SGKLEQDAMVKELKSKVET-----LEASLKQKEQELEGW----------TDNDNWGSSGN 322
+E A+V + + L A L + E+ELE N+ + +
Sbjct: 788 EPPVEVTAVVGGAELFLPLAGLIDLAAELARLEKELEKLEKEIDRIEKKLSNEGFVAKAP 847
Query: 323 EQDIEALKKENEEIKEKLAKQESTLAKLK 351
E+ +E K++ E + KLAK E LA LK
Sbjct: 848 EEVVEKEKEKLAEYQVKLAKLEERLAVLK 876
>gnl|CDD|219791 pfam08317, Spc7, Spc7 kinetochore protein. This domain is found in
cell division proteins which are required for
kinetochore-spindle association.
Length = 321
Score = 36.2 bits (84), Expect = 0.17
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 29/241 (12%)
Query: 603 ELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQ--ELHAK 660
ELKK + + + + +EEE L E+ + RE + I+ + N+ Q + HA+
Sbjct: 77 ELKKYISEGRDLFREIEEET--LAENPPLFREYFSA----SPDIKLLMDNQFQLVKTHAR 130
Query: 661 LINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEE 720
L ++ + Q L+G E L+E E M E KD I+++ L+ K +
Sbjct: 131 L---QSKKTWYEWRMQLLEGLKEGLEENLEGMKRDEE-LLNKDLNLINSIKPKLRKKLQA 186
Query: 721 LCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNK 780
L K E +L D LN ++ Q L KISE
Sbjct: 187 L-------------KEEIASLRQLADELNLCDPLELEKARQELRSLSVKISEKRKQLEEL 233
Query: 781 NNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQL 840
E+ +L I + L I + E+ E+ + ++ KEIS ++A +Q+L
Sbjct: 234 QQELQELTIAIEALTNKKSELLEEIAEAEKIR-EECRGWSAKEIS---KLKAKVSLLQKL 289
Query: 841 T 841
T
Sbjct: 290 T 290
Score = 31.5 bits (72), Expect = 3.7
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 14/132 (10%)
Query: 1598 EALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFL 1657
E L ++ + +E L + L + K + L L+ + + D E+
Sbjct: 150 EGLEENLEGMKRDEELLNKDLNLINSIKPKLRKKLQALKEEIASLRQLAD-ELN---LCD 205
Query: 1658 QGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLM 1717
EL + + L+ IS + QL+E L +L + + I+ LT K ++L+
Sbjct: 206 PLELEKARQELRSLSVKISEKRKQLEE----------LQQELQELTIAIEALTNKKSELL 255
Query: 1718 EELNKKEAKLKE 1729
EE+ + E +E
Sbjct: 256 EEIAEAEKIREE 267
Score = 31.5 bits (72), Expect = 4.5
Identities = 31/141 (21%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 323 EQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDND 382
E+++E +K++ E + + L S KL+ ++ L++E+ ++ D
Sbjct: 153 EENLEGMKRDEELLNKDLNLINSIKPKLRKKLQA-----LKEEIASLRQLADELNLCDPL 207
Query: 383 KLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAK 442
+L +QE + L+ K+SE + QL +++ L++ +E E +R +
Sbjct: 208 ELEKARQELRSLSVKISEKRKQLEELQQELQELTIAIEALTNKKSELLEEIAEAEKIREE 267
Query: 443 CSEFE-KTIVELKSQEELLKQ 462
C + K I +LK++ LL++
Sbjct: 268 CRGWSAKEISKLKAKVSLLQK 288
Score = 31.2 bits (71), Expect = 5.3
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 1003 ILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYE 1062
L+E + ++ + L +++ SI L +++ L++++ S + +EL E
Sbjct: 151 GLEENLEGMKRDEELLNKDLNLINSIKPKLRKKLQALKEEIASLRQLADELNLCDPL--E 208
Query: 1063 LEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTL 1122
LE+ + L + + K L +LQ +L I + N+ L
Sbjct: 209 LEKARQELRSLSV----KISEKRKQLEELQQELQELTIAIE----------ALTNKKSEL 254
Query: 1123 EYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKS 1159
E E K +E S E+ L+ S+++
Sbjct: 255 LEEIAEAEKIREECRGWSAK---EISKLKAKVSLLQK 288
Score = 30.8 bits (70), Expect = 6.7
Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 28/143 (19%)
Query: 587 KERLDEEVTVLSQENIELKKKLE-------QAVEKQKGLEEEIQQLE-----------ED 628
KE L+E + + ++ L K L + +K + L+EEI L +
Sbjct: 149 KEGLEENLEGMKRDEELLNKDLNLINSIKPKLRKKLQALKEEIASLRQLADELNLCDPLE 208
Query: 629 TSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQV---EKQALDGKYEEL 685
R++L S K L QEL I +EAL N+ E + EE
Sbjct: 209 LEKARQELRSLSVKISEKRKQLEELQQELQELTIAIEALTNKKSELLEEIAEAEKIREEC 268
Query: 686 K-------EKYEQMSEKFENQTG 701
+ K + + TG
Sbjct: 269 RGWSAKEISKLKAKVSLLQKLTG 291
Score = 30.8 bits (70), Expect = 7.9
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 122 IEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVE 181
E LE+ L+ DE+ ++ L +L + + L+EE+ SL+ L D
Sbjct: 149 KEGLEENLEGMKRDEELLNKDLNLINSIKPKLRKKLQALKEEIASLRQ-LADELNLCDPL 207
Query: 182 DIKKA------NESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
+++KA I++K + +E+L+ EL+ + A+ ++ E
Sbjct: 208 ELEKARQELRSLSVKISEKRKQLEELQQELQELTIAIEALTNKKSE 253
Score = 30.4 bits (69), Expect = 8.5
Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 19/150 (12%)
Query: 381 NDKLATLQQENKVLN---EKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELN 437
+ L ++++ ++LN ++ ++ +L +ALK++ L D+ + EL
Sbjct: 153 EENLEGMKRDEELLNKDLNLINSIKPKLRKKLQALKEEIASLRQ--LADELNLCDPLELE 210
Query: 438 NLRAKCSEFEKTIVELKSQEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGL 497
R + I E + Q E L+Q L + + ++ + L EE
Sbjct: 211 KARQELRSLSVKISEKRKQLEELQQELQELTIAIEA----------LTNKKSELLEEIAE 260
Query: 498 LRQKLSEQKVI----ISKLKTQLEAAQQGT 523
+ E + ISKLK ++ Q+ T
Sbjct: 261 AEKIREECRGWSAKEISKLKAKVSLLQKLT 290
>gnl|CDD|114219 pfam05483, SCP-1, Synaptonemal complex protein 1 (SCP-1).
Synaptonemal complex protein 1 (SCP-1) is the major
component of the transverse filaments of the synaptonemal
complex. Synaptonemal complexes are structures that are
formed between homologous chromosomes during meiotic
prophase.
Length = 787
Score = 36.2 bits (83), Expect = 0.18
Identities = 105/554 (18%), Positives = 237/554 (42%), Gaps = 51/554 (9%)
Query: 532 QQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLD 591
+++ D+E ++ +L + +++ L ++E + D N + T + L
Sbjct: 233 KEINDKEKQVSLLLIQITEKENKMKDLTFLLE----ESRDKANQLEEKTKLQDENLKELI 288
Query: 592 EEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLR 651
E+ L++E ++K L++++ QK LEE++Q + L E+ E++ + + +
Sbjct: 289 EKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHS 348
Query: 652 NEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLI 711
+ E A ++E L+ Q + + + + + + ++ S + E T
Sbjct: 349 FVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMT--------KFK 400
Query: 712 KNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKIS 771
N + + EEL ++L E L + K + E + +L+ K
Sbjct: 401 NNKEVELEELKKILAEDEKLLDEKKQFEKI---------------------AEELKGKEQ 439
Query: 772 ELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIE 831
EL + EI+DL +++ + + + + DL+ L+++ K I + +
Sbjct: 440 ELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKE----KLKNIELTAHCD 495
Query: 832 ASNHKIQQLTQETDTLKAELVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESV 891
+ ++LTQE + EL E K+++ + +N+ + L+ LESV
Sbjct: 496 KLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQI--ENLEEKEMNLRDELESV 553
Query: 892 KQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTK 951
++E + ++ + + + + E+ ++ K E+KC L+ ++ K +
Sbjct: 554 REEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEEL 613
Query: 952 EQLNKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHE---EDRKILDE-Y 1007
Q NK + SA + + A I + ++ EL + + ++ + ++ ED+KI +E
Sbjct: 614 HQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKL 673
Query: 1008 KQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHV--------ENELGQYRSK 1059
+ V++ A E + + I + + ++ E+ + + H ++ELG Y++K
Sbjct: 674 LEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNK 733
Query: 1060 VYELEQIQARLEAE 1073
E +A LE E
Sbjct: 734 EQEQSSAKAALEIE 747
>gnl|CDD|130083 TIGR01010, BexC_CtrB_KpsE, polysaccharide export inner-membrane
protein, BexC/CtrB/KpsE family. This family contains
gamma proteobacterial proteins involved in capsule
polysaccharide export [Transport and binding proteins,
Carbohydrates, organic alcohols, and acids].
Length = 362
Score = 35.8 bits (83), Expect = 0.18
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 230 ASDDVKEELEKLVVEKQELIEVIQNHE------------TLIAKLEADLTRVKEEKEAEV 277
A ++VKE ++L K EL++ ++ +LI+ LE +L RV+ +
Sbjct: 175 AENEVKEAEQRLNATKAELLKYQIKNKVFDPKAQSSAQLSLISTLEGELIRVQAQLAQLR 234
Query: 278 SGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIK 337
S EQ+ V L++++++L KQ +++ + + D + L +NE +
Sbjct: 235 SITPEQNPQVPSLQARIKSLR---KQIDEQRNQLSGGLGDSLNEQTADYQRLVLQNELAQ 291
Query: 338 EKLAKQESTLAKLKTHSESLQKQL 361
++L ++L +T E+ ++QL
Sbjct: 292 QQLKAALTSLQ--QTRVEADRQQL 313
>gnl|CDD|220614 pfam10174, Cast, RIM-binding protein of the cytomatrix active zone.
This is a family of proteins that form part of the CAZ
(cytomatrix at the active zone) complex which is
involved in determining the site of synaptic vesicle
fusion. The C-terminus is a PDZ-binding motif that binds
directly to RIM (a small G protein Rab-3A effector). The
family also contains four coiled-coil domains.
Length = 774
Score = 36.1 bits (83), Expect = 0.19
Identities = 54/272 (19%), Positives = 112/272 (41%), Gaps = 6/272 (2%)
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
E + +E + L+T+ + L +E + L +K ++ + A EI + +
Sbjct: 329 EDLTRAEQEKAILQTEVDALRYELERKHNTLTKKTASLQAAQEEKATYAGEIEDMRDRYE 388
Query: 159 FLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESE 218
+ +++ L+ K+ +L E ++ + E + + LE +EKAL EKE
Sbjct: 389 KTERKLRVLQKKIENLQETFRRKERRLKEEKERLRSLQTDTNTDTALEKLEKALAEKERI 448
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVS 278
+E +EE E E ++L E +QN + +++ E L +KEE S
Sbjct: 449 IERLKEQRD-RDERYEQEEFETYKKEFEDLKEEVQNLQLKLSERELQLELLKEEVSKLAS 507
Query: 279 GKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKE 338
+L+Q + ++ ++E + ++ E+EL+ N A+ +
Sbjct: 508 NQLKQRSDLERAHIELEKIREKHEKLEKELKRLRANPESAD-----RGSAVDAGTSRSRA 562
Query: 339 KLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
A + + +L E +++ + EME
Sbjct: 563 DSAGARNEVDRLLDRLEKAEQERDDTEMEAGR 594
Score = 34.6 bits (79), Expect = 0.63
Identities = 117/601 (19%), Positives = 217/601 (36%), Gaps = 68/601 (11%)
Query: 975 SIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQ---- 1030
IK++ E LQ+ + K E +I + Q+ +E +
Sbjct: 157 EIKKLLEMLQSKGLSAKAEEEDSERLGRIREAEDQQSHLEVLLEQKEKEHMMLREEIHQK 216
Query: 1031 --------TLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFE 1082
E K + +K E L + +++Y L+ EA+R + E E
Sbjct: 217 LQMERDDAKTEASQKLIDEKDTKIKEFEKMLEKAENEIYRLQSRCDTSEADRNRLDKEVE 276
Query: 1083 VKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNF 1142
+ + L+ ++ + D QEL K ++ L+ E + L Q + +
Sbjct: 277 AERSALAAMKAKCDR----------AAQELSRKKTELLGLQTELETLANQDSDMRQHLDK 326
Query: 1143 LKNELQSLQDAFSVMKSDNASLLLE----KNTLMETKLTLEAQLKELADNETQYKQMQIV 1198
LK +L + ++++++ +L E NTL + +L+A +E A + + M+
Sbjct: 327 LKEDLTRAEQEKAILQTEVDALRYELERKHNTLTKKTASLQAAQEEKATYAGEIEDMRDR 386
Query: 1199 YEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQ 1258
YE T+RKL + + T KE+ + +S D
Sbjct: 387 YEKTERKLRVLQKKIENLQETFRR--------------KERRLKEEKERLRSLQTDTNTD 432
Query: 1259 EMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRY 1318
LEK L+EK + + E R D Y+ +E E +E ++K+ K S R
Sbjct: 433 TALEKLEKALAEKERIIERLKEQRDRDERYEQEEFETYKKEFEDLKEEVQNLQLKLSERE 492
Query: 1319 SDEEHVQELRELQLMNESLQNEVLRSAT-EIDNMKETITYLEQYNLQLSKSQESSTTLTL 1377
E ++E N+ Q L A E++ ++E LE+ +L + ES+ +
Sbjct: 493 LQLELLKEEVSKLASNQLKQRSDLERAHIELEKIREKHEKLEKELKRLRANPESADRGSA 552
Query: 1378 LQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQ 1437
+ + + R +S E+ RL L + + D + L K+
Sbjct: 553 VDAGTSRSR--------------ADSAGARNEVDRLLDRLEKAEQERDDTEMEAGRLAKE 598
Query: 1438 LKTTSETLATKERQLAETK--------EQLSLAQSQLEEVTQLMSSNDRPEADGEPAQER 1489
L+ L ++ + T+ E L A+ + + + + A
Sbjct: 599 LEKAQRHLTKQQEKTEATRIEFERKSAELLEEAERLEKSEAEEETLRQSTQIGHAQAAAH 658
Query: 1490 EVVAQHVAPVE-----TSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLK 1544
+ HV +E ER +L +L+ Q+ E+N + EN LK
Sbjct: 659 NHIEHHVQKLESDLKQLRAEREQLVAQLEKSQQSLMEFQQELNAAEAERRKHLEENRELK 718
Query: 1545 Q 1545
Q
Sbjct: 719 Q 719
>gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA. During
the bacterial cell cycle, the tubulin-like cell-division
protein FtsZ polymerises into a ring structure that
establishes the location of the nascent division site.
EzrA modulates the frequency and position of FtsZ ring
formation.
Length = 559
Score = 36.0 bits (84), Expect = 0.20
Identities = 73/351 (20%), Positives = 153/351 (43%), Gaps = 58/351 (16%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
++ E I + EE+++LK E + +EEL+DK ++ + L K+
Sbjct: 110 LDTIEEDIEQILEELNELKESEEKNRKEVEELKDKYRE-------LRKTLLAKS---FSY 159
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
L++++ L+++ E D +A EV+ KL+ E +++E+ +
Sbjct: 160 GPALDELEKQLDELEEEFEQFVELTESGDYLEAR--------EVLLKLEEETDALEQKME 211
Query: 214 EKESEVEEWGNNDAWGASDDVKEELEKLVVEK------------QELIEVIQNHETLIAK 261
E ++E N+ +++K ++ E Q+L E I + L+ +
Sbjct: 212 EIPPLLKEL-QNEFPDQLEELKAGYREMTEEGYHFDHLDIEKELQDLKEQIDQNLALLEE 270
Query: 262 LEADLTRVKEEK------------EAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
L+ D + E+ E EV K + + +L +E KQ EL+
Sbjct: 271 LDLDEAEEENEEIEERIDTLYDILEKEVKAKKFVEKNIDKLTDFLEHAREQNKQLLLELD 330
Query: 310 ----GWTDNDNWGSSGN--EQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLE 363
+T N++ + E+ +E L+ + +++ E++A+++ ++L+ E ++KQL E
Sbjct: 331 RLQQSYTLNEDELETVRELEKQLEELEAQYDQLVERIAEKKVAYSELQEELEEIEKQLEE 390
Query: 364 KEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKK 414
E E EE ++ L L+++ EK+ E + +L ++ L+K
Sbjct: 391 IEKEQEEL---------SESLQGLRKDELEAREKLQEYRQKLHEIKRYLEK 432
>gnl|CDD|223092 COG0013, AlaS, Alanyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis].
Length = 879
Score = 36.1 bits (84), Expect = 0.22
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 565 NYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQ-----KGLE 619
Y+QE + L A L L +V L +E EL+K+LE+ +K L
Sbjct: 708 EYLQE---QEDLLKEIASLLKVPPELLPKVERLLEELKELEKELERLKKKLAAAELADLL 764
Query: 620 EEIQQLE-EDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQAL 678
+ E +L ++++ D K LR +L KL + ++ K +L
Sbjct: 765 SNAKAEEIGGVKVLAKEVDGADM------KELREIADDLKKKLGSAVIVLASVADGKVSL 818
Score = 34.9 bits (81), Expect = 0.50
Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 38/169 (22%)
Query: 45 EAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRAL 104
A + LQ + D LK+ S ++ EL+P VE E+++ L
Sbjct: 705 AALEYLQEQEDLLKE--------------------IASLLKVPPELLPKVERLLEELKEL 744
Query: 105 NEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEM 164
+E+ +LK K + L + ++I K ++ +++ ++ L+E
Sbjct: 745 EKELERLKKKLA-AAELADLLSNAKAEEIGGVKVLAKEVDGADMKE---------LREIA 794
Query: 165 QSLKDKLRDL--------DENVTVEDIKKANESAIAKKDEVIEKLKAEL 205
LK KL D V++ + + K E++++L A +
Sbjct: 795 DDLKKKLGSAVIVLASVADGKVSLVVAVSKDLTDKVKAGELVKELAAIV 843
Score = 31.8 bits (73), Expect = 4.3
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 21/92 (22%)
Query: 282 EQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLA 341
EQ+ ++KE+ S ++ L + E+ LE + L+KE E +K+KLA
Sbjct: 712 EQEDLLKEIASLLKVPPELLPKVERLLEEL---------------KELEKELERLKKKLA 756
Query: 342 KQESTLAKLKTHSES------LQKQLLEKEME 367
E +E L K++ +M+
Sbjct: 757 AAELADLLSNAKAEEIGGVKVLAKEVDGADMK 788
>gnl|CDD|223250 COG0172, SerS, Seryl-tRNA synthetase [Translation, ribosomal
structure and biogenesis].
Length = 429
Score = 35.3 bits (82), Expect = 0.30
Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 198 IEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHET 257
++ ++ ++V + L+++ G ++L +L +E ++++ E
Sbjct: 4 LKLIRENPDAVREKLKKR-------------GGDALDVDKLLEL---DEERRKLLRELEE 47
Query: 258 LIAK---LEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
L A+ L ++ R + E + + + VKELK K++ LEA+L + E EL+
Sbjct: 48 LQAERNELSKEIGRALKRGEDDAEELIAE---VKELKEKLKELEAALDELEAELD 99
Score = 34.5 bits (80), Expect = 0.60
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 123 EELEDKLQQKIDDEKSVS--YQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTV 180
+ + +KL+++ D V +L+E+ ++ L E EE+Q+ +++L + +
Sbjct: 12 DAVREKLKKRGGDALDVDKLLELDEERRKL--LREL-----EELQAERNEL-----SKEI 59
Query: 181 EDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
K E + +++LK +L+ +E AL E E+E++
Sbjct: 60 GRALKRGEDDAEELIAEVKELKEKLKELEAALDELEAELDT 100
>gnl|CDD|235461 PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.
Length = 425
Score = 35.0 bits (82), Expect = 0.36
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 281 LEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKL 340
LE D +EL++++E L+A +E+ + +D EAL E +E+KE++
Sbjct: 31 LELDEERRELQTELEELQAERNALSKEIGQ--------AKRKGEDAEALIAEVKELKEEI 82
Query: 341 AKQESTLAKLKTHSESLQKQL 361
E+ L +L+ E L ++
Sbjct: 83 KALEAELDELEAELEELLLRI 103
Score = 32.7 bits (76), Expect = 2.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 1677 TLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNN 1732
LQ +L+E + +A + Q +K + + L +V +L EE+ EA+L E+
Sbjct: 39 ELQTELEELQAERNALSKEIGQAKRKGEDAEALIAEVKELKEEIKALEAELDELEA 94
Score = 31.6 bits (73), Expect = 4.2
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 183 IKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEE 221
K+ E A A EV ++LK E++++E L E E+E+EE
Sbjct: 61 AKRKGEDAEALIAEV-KELKEEIKALEAELDELEAELEE 98
>gnl|CDD|234172 TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family.
Members of this protein family are homologs of ClpB, an
ATPase associated with chaperone-related functions.
These ClpB homologs, designated ClpV1, are a key
component of the bacterial pathogenicity-associated type
VI secretion system [Protein fate, Protein and peptide
secretion and trafficking, Cellular processes,
Pathogenesis].
Length = 852
Score = 35.3 bits (82), Expect = 0.38
Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 33/128 (25%)
Query: 534 VQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEE 593
++D RI L E + L R LG + A+L AE L+ E
Sbjct: 421 LEDLRRRIAALELELDALE-REAALGADHDER--------------LAELRAELAALEAE 465
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE 653
+ LE +++K L E I LR +LE+ + LR +
Sbjct: 466 LAA-----------LEARWQQEKELVEAILA-------LRAELEADADAPADDDAALRAQ 507
Query: 654 IQELHAKL 661
+ EL A L
Sbjct: 508 LAELEAAL 515
>gnl|CDD|236798 PRK10929, PRK10929, putative mechanosensitive channel protein;
Provisional.
Length = 1109
Score = 35.4 bits (82), Expect = 0.39
Identities = 75/371 (20%), Positives = 131/371 (35%), Gaps = 75/371 (20%)
Query: 1350 NMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTE------- 1402
E + L+ L + + S Q + L+ +L Q +N + E
Sbjct: 42 AQAEIVEALQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPN 101
Query: 1403 --SNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLS 1460
++ QEIL+++ +L + Q + + + S++L+ +Q E + QL+
Sbjct: 102 MSTDALEQEILQVSS-------QLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLN 154
Query: 1461 LAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVE-------TSRERNELA-LRL 1512
+ +L Q + + + P A + + A A V+ ++ R ELA LR
Sbjct: 155 EIERRL----QTLGTPNTPLAQAQLTALQAESAALKALVDELELAQLSANNRQELARLRS 210
Query: 1513 QNLQEEKTMLLTEINDLRLNQNTL-YNENERLKQH---LLKTEEDNTSELVKAEQTIQDL 1568
+ ++ L + LR N+ E ER + L + D +V + ++L
Sbjct: 211 ELAKKRSQQLDAYLQALRNQLNSQRQREAERALESTELLAEQSGDLPKSIVAQFKINREL 270
Query: 1569 HVKLREAEERV------KSSATAYTSASVR---------------SNQQVEALTSQVKSL 1607
L + +R+ + A + T VR SN EAL +QV L
Sbjct: 271 SQALNQQAQRMDLIASQQRQAASQT-LQVRQALNTLREQSQWLGVSNALGEALRAQVARL 329
Query: 1608 TE-------------------QKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDN 1648
E + E L K Q + Q LT Q + Q
Sbjct: 330 PEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQADGQPLTAEQNRILDAQLRTQR 389
Query: 1649 EIAQSLEFLQG 1659
E+ SL L G
Sbjct: 390 ELLNSL--LSG 398
Score = 34.3 bits (79), Expect = 0.76
Identities = 80/422 (18%), Positives = 155/422 (36%), Gaps = 79/422 (18%)
Query: 866 ALLAAAPVDDNIVIENQQLKQNLESVKQENTL----VVENLQNLIAQKDYEINAKVTELS 921
A L + + +Q+ Q LE K T +VE LQ+ + + E
Sbjct: 10 AWLLSWGAYAATAPDEKQITQELEQAKAAKTPAQAEIVEALQSALNWLE--------ERK 61
Query: 922 IIMEKCKQYE---DKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQA------E 972
+E+ KQY+ D +L + L +L + + + M+ + E +Q +
Sbjct: 62 GSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMSTDALEQEILQVSSQLLEK 121
Query: 973 NISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELD-----------AKLAEE 1021
+ +Q + + ++++L Q E R+ L+E ++R+Q L L E
Sbjct: 122 SRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQAE 181
Query: 1022 IASKTSIIQTLEI---------QVKELQDKL--RSYTHVENELGQYRSKVYELEQIQARL 1070
A+ +++ LE+ ++ L+ +L + ++ L R+++ Q +A
Sbjct: 182 SAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAER 241
Query: 1071 EAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQ----MQTLEYEK 1126
E T+ + E Q I + +EL + NQ M + ++
Sbjct: 242 ALESTELLAE-------------QSGDLPKSIVAQFKINRELSQALNQQAQRMDLIASQQ 288
Query: 1127 QELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELA 1186
++ Q + A N L+ + Q L + N L E L AQ+ L
Sbjct: 289 RQAASQTLQVRQALNTLREQSQWLGVS---------------NALGE---ALRAQVARLP 330
Query: 1187 D-NETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSE 1245
+ + Q ++ QR E+L + + + L A IL + T E
Sbjct: 331 EMPKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQADGQPLTAEQNRILDAQLRTQRE 390
Query: 1246 ML 1247
+L
Sbjct: 391 LL 392
Score = 31.9 bits (73), Expect = 4.5
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 50/240 (20%)
Query: 492 REESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGL 551
RE S L Q L +Q+ + ++E Q + + P+ Q +++ L E+ L
Sbjct: 133 REISDSLSQ-LPQQQTEARRQLNEIERRLQTLGTPNTPLAQ------AQLTALQAESAAL 185
Query: 552 RTRVEQLGLV-IENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVL-SQENIELKKKLE 609
+ V++L L + N QE + + L ++LD + L +Q N + +++ E
Sbjct: 186 KALVDELELAQLSANNRQELARLRSEL-----AKKRSQQLDAYLQALRNQLNSQRQREAE 240
Query: 610 QAVEKQKGLEEEIQQLEED-----------TSILREQLESKDQVDDSIEK---------- 648
+A+E + L E+ L + + L +Q + D + +
Sbjct: 241 RALESTELLAEQSGDLPKSIVAQFKINRELSQALNQQAQRMDLIASQQRQAASQTLQVRQ 300
Query: 649 ---TLRNEIQELHAKLINVEALVNQAQVEK-------QALDGKYEELKEK---YEQMSEK 695
TLR + Q L EAL +AQV + Q LD + +L+ + YE + K
Sbjct: 301 ALNTLREQSQWLGVSNALGEAL--RAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNK 358
Score = 30.8 bits (70), Expect = 9.3
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 1531 LNQNTLYNENERLKQ-HLLKTEEDNTSE----LVKAEQTIQDLHVKLREAEERVKSSATA 1585
L Q L ++ L++ + E+D E L + Q + +L E E R+++ T
Sbjct: 107 LEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTP 166
Query: 1586 YTSASVRSNQQVEALTSQVKSLTEQKE-------KLQEKLYQAEDVVQKHQASLTN-LQI 1637
T + ++A ++ +K+L ++ E QE ++ +K L LQ
Sbjct: 167 NTPLAQAQLTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQA 226
Query: 1638 VLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARESLSAAGRLSD 1697
+ Q +++ E ++LE EL A+ + L ++ Q + RE LS
Sbjct: 227 LRNQLNSQRQREAERALE--STEL---LAEQSG--DLPKSIVAQFKINRE-------LSQ 272
Query: 1698 QLNQKSQTIQELTEKVNQ 1715
LNQ++Q + + + Q
Sbjct: 273 ALNQQAQRMDLIASQQRQ 290
>gnl|CDD|202833 pfam03962, Mnd1, Mnd1 family. This family of proteins includes
MND1 from S. cerevisiae. The mnd1 protein forms a
complex with hop2 to promote homologous chromosome
pairing and meiotic double-strand break repair.
Length = 188
Score = 34.1 bits (79), Expect = 0.41
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHN 157
++ + L + +LK + EL RI EL+ +I+ K + EE+ + +L +
Sbjct: 61 SQALNKLKTRLEKLKKELEELKQRIAELQA----QIEKLKKGREETEERTELLEELKQ-- 114
Query: 158 RFLQEEMQSLKDKLRDLDEN--VTVEDIKKANESAIA 192
L++E++ LK +L ++N +E +K+ + A
Sbjct: 115 --LEKELKKLKAELEKYEKNDPERIEKLKEETKVAKE 149
Score = 32.2 bits (74), Expect = 1.6
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 581 AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKD 640
+L E E L + + L + +LKK E+ E++ L EE++QLE++ L+ +LE +
Sbjct: 72 EKLKKELEELKQRIAELQAQIEKLKKGREET-EERTELLEELKQLEKELKKLKAELEKYE 130
Query: 641 QVDDSIEKTLRNEIQELHA 659
+ D + L+ E +
Sbjct: 131 KNDPERIEKLKEETKVAKE 149
>gnl|CDD|234070 TIGR02956, TMAO_torS, TMAO reductase sytem sensor TorS. This
protein, TorS, is part of a regulatory system for the
torCAD operon that encodes the pterin molybdenum
cofactor-containing enzyme trimethylamine-N-oxide (TMAO)
reductase (TorA), a cognate chaperone (TorD), and a
penta-haem cytochrome (TorC). TorS works together with
the inducer-binding protein TorT and the response
regulator TorR. TorS contains histidine kinase ATPase
(pfam02518), HAMP (pfam00672), phosphoacceptor
(pfam00512), and phosphotransfer (pfam01627) domains and
a response regulator receiver domain (pfam00072) [Signal
transduction, Two-component systems].
Length = 968
Score = 35.1 bits (81), Expect = 0.45
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 47/330 (14%)
Query: 1368 SQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDL 1427
+Q + L + QR Q + + + + E+ + + L + L +L+ L
Sbjct: 57 NQIIFSVQLLSNVDDERQR---QAIGKKLTLQS-ETLLHSLKALGELPFNEDLLARLEVL 112
Query: 1428 GGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQ 1487
+ QL + T + QL + +LS A ++ E++Q +N A +
Sbjct: 113 VKDIIDTLAQLGLSVGERITLQAQLQQLSRELSEAAQEISELSQSQVANASTIALANVSG 172
Query: 1488 EREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHL 1547
+++ S + +++ L +L E L +N+LRL + N + K
Sbjct: 173 IYDLIE--------SGKNDQVYQALDDLIEVDLDLAERLNELRLLALRVLNTIDDTK--- 221
Query: 1548 LKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSL 1607
+ +L Q ++ + + RV+S RSNQ + L + +
Sbjct: 222 ------TSQDLAHINQLDEEFNRLVMILSRRVQSIEDPT-----RSNQLKDLLVTL--NK 268
Query: 1608 TEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAK 1667
T + KL +L Q Q+ Q + LEQF + + ++Q +
Sbjct: 269 TPKLFKLLRQLSQILQKQQRLQQAN------LEQFT-QLNTTVSQLVN-----------A 310
Query: 1668 NNELTQL-ISTLQHQLQEARESLSAAGRLS 1696
N+ T+ +S L L A+ L G L
Sbjct: 311 QNQRTEAAVSDLLMTLSVAQFGLLITGMLG 340
>gnl|CDD|223542 COG0466, Lon, ATP-dependent Lon protease, bacterial type
[Posttranslational modification, protein turnover,
chaperones].
Length = 782
Score = 34.8 bits (81), Expect = 0.46
Identities = 25/144 (17%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 565 NYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQ 624
Y + + + + + +L + + +E K+++ + ++ ++ LE+ +
Sbjct: 141 EYAKLNKKIPPEELQSLNSIDDPGKLADTIAAHLPLKLEEKQEILETLDVKERLEKLLDL 200
Query: 625 LEEDTSILREQLESKDQVDDSIEKTLR----NE----IQ-------ELHAKLINVEALVN 669
LE++ +L+ + + +V + +EK+ R E IQ + ++ + +
Sbjct: 201 LEKEIDLLQLEKRIRKKVKEQMEKSQREYYLREQLKAIQKELGEDDDDKDEVEELREKIE 260
Query: 670 QAQVEKQALDGKYEELKEKYEQMS 693
+ ++ K+A + +ELK K E MS
Sbjct: 261 KLKLPKEAKEKAEKELK-KLETMS 283
Score = 31.4 bits (72), Expect = 6.2
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 906 IAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAM 965
++ ++ A++ L D+ E+E+ + + L++F +LNK E
Sbjct: 103 LSDEEEFFEAEIELLPDE------PIDEEREIEALVRSILSEFEEYAKLNKKIPPEELQS 156
Query: 966 LESVQ---------AENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDA 1016
L S+ A ++ +K EE Q + ETL + E K+LD ++ + L
Sbjct: 157 LNSIDDPGKLADTIAAHLPLK--LEEKQEILETL----DVKERLEKLLDLLEKEIDLL-- 208
Query: 1017 KLAEEIASKTSIIQTLEIQVKE--LQDKLRSYTHVENELGQYRSKVYELEQIQARLEA 1072
+L + I K + + +E +E L+++L++ ++ ELG+ E+E+++ ++E
Sbjct: 209 QLEKRIRKK--VKEQMEKSQREYYLREQLKA---IQKELGEDDDDKDEVEELREKIEK 261
>gnl|CDD|200948 pfam00038, Filament, Intermediate filament protein.
Length = 312
Score = 34.5 bits (80), Expect = 0.47
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 65/339 (19%)
Query: 744 QLDNLN---TNYQDKINTLIQSKNDLEAKISELNNAQHNK--------NNEINDLNKRIS 792
Q+ NLN +Y DK+ L Q +LEAKI EL + + EI +L K++
Sbjct: 5 QMQNLNDRLASYIDKVRFLEQQNKELEAKIEELRQKKSAEPSRLYSLYEQEIRELRKQLD 64
Query: 793 LFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKAELV 852
A LQ I +L ++ +E E E++ ++ E +++ E + +L
Sbjct: 65 ELTNERARLQLEIDNLRLAAED-FREKYEDELNLRQSAENDIVGLRKDLDEATLARVDLE 123
Query: 853 AQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDY- 911
+ ES L++ L +K+ + V LQ+ I +
Sbjct: 124 MKIES--------------------------LQEELAFLKKNHEEEVRELQSQIQGQVNV 157
Query: 912 EINA--KVTELSIIMEKCKQYEDKCI----ELESTLDAKLTDFST-----KEQLN--KNK 958
E++A K+ + E QYE+ E E +KL + + L K +
Sbjct: 158 EMDAARKLDLTKALAEIRAQYEELAEKNRQEAEEWYKSKLEELQQAAARNGDALRSAKEE 217
Query: 959 MAELSAMLESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKL 1018
+ EL ++S++ E S+K+ L+ L + +E + +Y+ + EL+ +L
Sbjct: 218 ITELRRQIQSLEIELQSLKKQKASLER---QLAELEERYELELA---DYQDTISELEEEL 271
Query: 1019 AEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYR 1057
+ + + Q++E Q+ L ++ E+ YR
Sbjct: 272 QQ-------LKAEMARQLREYQELLDVKLALDIEIATYR 303
Score = 31.8 bits (73), Expect = 3.7
Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 50/282 (17%)
Query: 97 YNEKIRALNEEVSQLKTKENEL----HSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQ 152
Y +K+R L ++ +L+ K EL + L +Q+I + + QL+E E ++
Sbjct: 16 YIDKVRFLEQQNKELEAKIEELRQKKSAEPSRLYSLYEQEIRELRK---QLDELTNERAR 72
Query: 153 LTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEV---IEKLKAELESVE 209
L Q D LR ED ++ E + + I L+ +L+
Sbjct: 73 L-----------QLEIDNLRLA-----AEDFREKYEDELNLRQSAENDIVGLRKDLDEAT 116
Query: 210 KALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRV 269
A + E ++E ++EEL L +E + +Q+ +E D R
Sbjct: 117 LARVDLEMKIES------------LQEELAFLKKNHEEEVRELQSQIQGQVNVEMDAAR- 163
Query: 270 KEEKEAEVSGKLEQDAMVKELKSKVETL-EASLKQKEQELEGWTDNDNWGSSGNEQDIEA 328
KL+ + E++++ E L E + ++ E+ + + ++ N + +
Sbjct: 164 ----------KLDLTKALAEIRAQYEELAEKNRQEAEEWYKSKLEELQQAAARNGDALRS 213
Query: 329 LKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
K+E E++ ++ E L LK SL++QL E E E
Sbjct: 214 AKEEITELRRQIQSLEIELQSLKKQKASLERQLAELEERYEL 255
Score = 31.4 bits (72), Expect = 3.9
Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 40/267 (14%)
Query: 531 DQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERL 590
+QQ ++ E++IE L ++ +R+ L Y QE + LD +LT E+ RL
Sbjct: 24 EQQNKELEAKIEELRQKKSAEPSRLYSL-------YEQEIRELRKQLD---ELTNERARL 73
Query: 591 DEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLE---EDTSILREQLESK-DQVDDSI 646
E+ L + ++K E + ++ E +I L ++ ++ R LE K + + + +
Sbjct: 74 QLEIDNLRLAAEDFREKYEDELNLRQSAENDIVGLRKDLDEATLARVDLEMKIESLQEEL 133
Query: 647 E---KTLRNEIQELHAKLINVEALVNQAQVE-----KQALDGKYEELKEKYEQMSEK--- 695
K E++EL ++ + Q VE K L E++ +YE+++EK
Sbjct: 134 AFLKKNHEEEVRELQSQ------IQGQVNVEMDAARKLDLTKALAEIRAQYEELAEKNRQ 187
Query: 696 -----FENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTL----DNIKVEKENLEIQLD 746
++++ + L+S KEE+ L + +L ++K +K +LE QL
Sbjct: 188 EAEEWYKSKLEELQQAAARNGDALRSAKEEITELRRQIQSLEIELQSLKKQKASLERQLA 247
Query: 747 NLNTNYQDKINTLIQSKNDLEAKISEL 773
L Y+ ++ + ++LE ++ +L
Sbjct: 248 ELEERYELELADYQDTISELEEELQQL 274
>gnl|CDD|217933 pfam04156, IncA, IncA protein. Chlamydia trachomatis is an
obligate intracellular bacterium that develops within a
parasitophorous vacuole termed an inclusion. The
inclusion is non-fusogenic with lysosomes but intercepts
lipids from a host cell exocytic pathway. Initiation of
chlamydial development is concurrent with modification
of the inclusion membrane by a set of C.
trachomatis-encoded proteins collectively designated
Incs. One of these Incs, IncA, is functionally
associated with the homotypic fusion of inclusions. This
family probably includes members of the wider Inc family
rather than just IncA.
Length = 186
Score = 34.0 bits (78), Expect = 0.47
Identities = 30/128 (23%), Positives = 71/128 (55%), Gaps = 19/128 (14%)
Query: 99 EKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNR 158
+K+ L E+S+LK + +EL +E+LE+++ E E+ L E +
Sbjct: 72 QKLEELQGELSELKQQLSELQEELEDLEERIA--------------ELESELEDLKEDLQ 117
Query: 159 FLQEEMQSLKDKLRDLDENV-----TVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
L+E ++SL+++L L+E++ + ++++ + + E +E+L+ L+ +++A++
Sbjct: 118 LLRELLKSLEERLESLEESIKELAKELRELRQDLREEVEELREELERLQENLQRLQEAIQ 177
Query: 214 EKESEVEE 221
E +S +E+
Sbjct: 178 ELQSLLEQ 185
Score = 32.4 bits (74), Expect = 1.1
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 15/142 (10%)
Query: 604 LKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLIN 663
L K + + LEE +L E L E E + L I EL ++L +
Sbjct: 60 LLLKAPVQSVRPQKLEELQGELSELKQQLSELQEELED--------LEERIAELESELED 111
Query: 664 VEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCR 723
++ + + ++L+ + E L+E ++++++ L + ++ +EEL R
Sbjct: 112 LKEDLQLLRELLKSLEERLESLEESIKELAKELRELRQD-------LREEVEELREELER 164
Query: 724 LLDEKNTLDNIKVEKENLEIQL 745
L + L E ++L QL
Sbjct: 165 LQENLQRLQEAIQELQSLLEQL 186
Score = 31.7 bits (72), Expect = 2.5
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 592 EEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESK-------DQVDD 644
E++ L Q+ EL+++LE E+ LE E++ L+ED +LRE L+S ++
Sbjct: 79 GELSELKQQLSELQEELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESLEESIK 138
Query: 645 SIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQM 692
+ K LR Q+L ++ + + + Q Q L +EL+ EQ+
Sbjct: 139 ELAKELRELRQDLREEVEELREELERLQENLQRLQEAIQELQSLLEQL 186
Score = 30.1 bits (68), Expect = 7.4
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 1498 PVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSE 1557
++ EL L L+++ + L E+ DL L+ L +ED
Sbjct: 67 QSVRPQKLEELQGELSELKQQLSELQEELEDLE-------ERIAELESELEDLKED---- 115
Query: 1558 LVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEK 1617
+Q L L+ EER++S + + + + L +V+ L E+ E+LQE
Sbjct: 116 -------LQLLRELLKSLEERLESLEESIKELAKELRELRQDLREEVEELREELERLQEN 168
Query: 1618 LYQAEDVVQKHQA 1630
L + ++ +Q+ Q+
Sbjct: 169 LQRLQEAIQELQS 181
>gnl|CDD|113356 pfam04582, Reo_sigmaC, Reovirus sigma C capsid protein.
Length = 326
Score = 34.5 bits (79), Expect = 0.52
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 706 DIDTLIKNLQSKKEELCRLLDEKN-TLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKN 764
I + + +L + +++ LD+ TL+ + + L+ +D+L++ D +L S +
Sbjct: 53 TISSRLSDLSADLQDMTTSLDDAKATLNGLITTVQALQTSVDSLSSELADL--SLTVSAH 110
Query: 765 DLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLE 809
D A IS+L H + +I++L +S N L++ + LE
Sbjct: 111 D--AAISDLQTTVHANSTDISNLKSSVSANGLNITDLEQRVKSLE 153
>gnl|CDD|235943 PRK07133, PRK07133, DNA polymerase III subunits gamma and tau;
Validated.
Length = 725
Score = 34.8 bits (80), Expect = 0.52
Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 14/248 (5%)
Query: 564 NNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQ 623
N ++ NS+DN + E ++ +N+E + + K + +
Sbjct: 363 ENEIKFKKIEENSIDNLDIKEKKIENENDIEGKSDTKNLEEGFETKDNKNKNSSFINKTE 422
Query: 624 QLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYE 683
+ ++ + E LE K +IE E ++ +I+ E
Sbjct: 423 NILTNSPLKDELLE-KTTEIINIENPQEFEFGQIGNDIISTEIAQLDENQNLIDTGEFDL 481
Query: 684 ELKEKYEQMSEKFE--NQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENL 741
E E ++ ++ D T+ NL K + + K+T + I E
Sbjct: 482 ENNFSNSFNPENGNKIDENINETFDTSTISANLSENKTNFAQSFNNKDT-NLINSEIPID 540
Query: 742 EIQLDNLNTNYQDKINTLIQSKNDLEA---------KISELNNAQHNKNNEINDLNKRIS 792
I+ N Q K +K+ L I + Q + + NK +
Sbjct: 541 LIKDTITINNSQ-KNVKKNGNKDYLSVEEVINLIMLAIKFHSQNQVEYKKLVQNWNKNLP 599
Query: 793 LFEENNAF 800
LFE + F
Sbjct: 600 LFEYDVEF 607
Score = 33.6 bits (77), Expect = 1.1
Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 8/242 (3%)
Query: 755 KINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE 814
K+ L + + + E +I + N + ++ K+I + L+ +
Sbjct: 351 KLLALSELEEEDENEIKFKK-IEENSIDNLDIKEKKIENENDIEGKSDTKNLEEGFE-TK 408
Query: 815 KLKEFNEKEISYNENIEASNHKIQQLTQET-DTLKAELVAQAESTQLVKQEQALLAAAPV 873
K N I+ ENI ++ +L ++T + + E + E Q+ + A
Sbjct: 409 DNKNKNSSFINKTENILTNSPLKDELLEKTTEIINIENPQEFEFGQIGNDIISTEIAQLD 468
Query: 874 DDNIVIENQQLKQNLESVKQENT----LVVENLQNLIAQKDYEINAKVTELSIIMEKCKQ 929
++ +I+ + N + EN+ N + + +
Sbjct: 469 ENQNLIDTGEFDLENNFSNSFNPENGNKIDENINETFDTSTISANLSENK-TNFAQSFNN 527
Query: 930 YEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALTET 989
+ I E +D + K L + N+ + + Q E
Sbjct: 528 KDTNLINSEIPIDLIKDTITINNSQKNVKKNGNKDYLSVEEVINLIMLAIKFHSQNQVEY 587
Query: 990 LK 991
K
Sbjct: 588 KK 589
>gnl|CDD|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain
(CALCOCO1) like. Proteins found in this family are
similar to the coiled-coil transcriptional coactivator
protein coexpressed by Mus musculus (CoCoA/CALCOCO1).
This protein binds to a highly conserved N-terminal
domain of p160 coactivators, such as GRIP1, and thus
enhances transcriptional activation by a number of
nuclear receptors. CALCOCO1 has a central coiled-coil
region with three leucine zipper motifs, which is
required for its interaction with GRIP1 and may regulate
the autonomous transcriptional activation activity of the
C-terminal region.
Length = 546
Score = 34.6 bits (79), Expect = 0.52
Identities = 59/311 (18%), Positives = 124/311 (39%), Gaps = 31/311 (9%)
Query: 904 NLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELS 963
N + +K + V+++ +E+ + E L+ + + + + M+
Sbjct: 153 NDLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEELEEQHKEAQSSSE----SMSAER 208
Query: 964 AMLESVQAENIS-IKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAE-- 1020
L + +AEN I ++ +++Q LT+ ++ E + I E ++ EL +L +
Sbjct: 209 NALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAELERMKGELKQRLKKMT 268
Query: 1021 -EIASKTSIIQTLEIQVKELQDKLRSYTHV----ENELGQYRSKVYELEQIQARLEAERT 1075
+ + + L+++ ++L + LR+ + + G ++ L ++ AE
Sbjct: 269 IQRRDEETERIDLQLENEQLHEDLRTLQERLESSQQKAGLLGEELASLGSLRDHTIAELH 328
Query: 1076 QWIHEFEVKTNTLSDLQTQLDTYNAKITHA-ALVEQELGEMKNQMQTLEYEKQELLKQIQ 1134
Q E + LS L L ++ + Q K+++Q L E +L + +Q
Sbjct: 329 QSRLESAQMSLQLSQLNLALKEGQSQWAQERETLRQSAEADKDRIQKLSAELLKLEEWLQ 388
Query: 1135 EESIASNFL------------------KNELQSLQDAFSVMKSDNASLLLEKNTLMETKL 1176
EE L + EL L+ A V++ + L EK L++
Sbjct: 389 EERSQREKLEVELGIEKDCNRVQLSENRRELSELRSALRVLQKEKEQLQEEKQELLDYIR 448
Query: 1177 TLEAQLKELAD 1187
LE +L + AD
Sbjct: 449 VLELRLDKEAD 459
Score = 33.0 bits (75), Expect = 1.6
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 43/299 (14%)
Query: 48 DMLQNEYDDLKQKFDEVVNRTKSDNGN--QTEVPTTSTVRNGFELMPNVEDYNEKIRALN 105
+ Q E +DL +KF + Q E + EL ++ +++
Sbjct: 146 EGCQRERNDLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEELEEQHKEAQSSSESMS 205
Query: 106 EEVSQLKTKENELHSRIEELEDKLQ---QKIDDEKSVSYQ------------------LE 144
E + L + E RI ELE +Q QK + V L+
Sbjct: 206 AERNALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAELERMKGELKQRLK 265
Query: 145 EKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIK-----KANESAIAKKDEVIE 199
+ I+ LQ E + L + LR L E + K + S + +D I
Sbjct: 266 KMTIQRRDEETERIDLQLENEQLHEDLRTLQERLESSQQKAGLLGEELASLGSLRDHTIA 325
Query: 200 KL-KAELESVEKALRE-------KESEVEEWGNNDAWGASDDV-KEELEKLVVEKQELIE 250
+L ++ LES + +L+ KE + + + S + K+ ++KL E +L E
Sbjct: 326 ELHQSRLESAQMSLQLSQLNLALKEGQSQWAQERETLRQSAEADKDRIQKLSAELLKLEE 385
Query: 251 VIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
+Q + KLE +L EK+ E + EL+S + L+ K+KEQ E
Sbjct: 386 WLQEERSQREKLEVELGI---EKDCNRVQLSENRRELSELRSALRVLQ---KEKEQLQE 438
Score = 32.3 bits (73), Expect = 2.8
Identities = 59/309 (19%), Positives = 125/309 (40%), Gaps = 31/309 (10%)
Query: 1109 EQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEK 1168
++E ++ + LE + ++ +I++ A + + L++ +S + S+ E+
Sbjct: 149 QRERNDLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEELEEQHKEAQSSSESMSAER 208
Query: 1169 NTLMETKLTLEAQLKELAD-----------NETQYKQMQIVYEDTQRKLNEELARRDATI 1217
N L+ + + ++ EL N+ + Q + + +R E R
Sbjct: 209 NALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAELERMKGELKQRLKKMT 268
Query: 1218 ATLNTTGAPDLNASIEN-ILKEKDATLSEMLKKSEAK----DKTLQEMQAALEKHLSEKY 1272
++ +EN L E TL E L+ S+ K + L + + + ++E +
Sbjct: 269 IQRRDEETERIDLQLENEQLHEDLRTLQERLESSQQKAGLLGEELASLGSLRDHTIAELH 328
Query: 1273 QFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYS---DEEHVQEL-R 1328
Q E+ ++ + + L KE Q E ++++R S D++ +Q+L
Sbjct: 329 QSRLESAQMSLQLSQLNLALKEGQSQWAQE----------RETLRQSAEADKDRIQKLSA 378
Query: 1329 ELQLMNESLQNE-VLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRT 1387
EL + E LQ E R E++ E Q + + E + L +LQ E + +
Sbjct: 379 ELLKLEEWLQEERSQREKLEVELGIEKDCNRVQLSENRRELSELRSALRVLQKEKEQLQE 438
Query: 1388 LNQQLVQIV 1396
Q+L+ +
Sbjct: 439 EKQELLDYI 447
Score = 31.9 bits (72), Expect = 3.6
Identities = 67/339 (19%), Positives = 141/339 (41%), Gaps = 31/339 (9%)
Query: 89 ELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAI 148
+LM + + + QL+T + EELE++ ++ +S+S +
Sbjct: 154 DLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEELEEQHKEAQSSSESMSAERNALLA 213
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAIAKKDEVIEKLKAELES 207
+ ++ + L++++Q+L K ++ D + +DI+ E + + ++K+ +
Sbjct: 214 QRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAELERMKGELKQRLKKMTIQRRD 273
Query: 208 VEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLT 267
E + + E E+ + E+L L QE +E Q L+ + A L
Sbjct: 274 EETERIDLQLENEQ------------LHEDLRTL----QERLESSQQKAGLLGEELASLG 317
Query: 268 RVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIE 327
+++ AE+ + A + ++ + +L KE + + + Q E
Sbjct: 318 SLRDHTIAELHQSRLESAQM-----SLQLSQLNLALKEGQSQWAQER-----ETLRQSAE 367
Query: 328 ALKKENEEIKEKLAKQESTLAKLKTHSESLQKQL-LEKEMELEEWGNNDSWGGD-NDKLA 385
A K +++ +L K E L + ++ E L+ +L +EK+ + N + L
Sbjct: 368 ADKDRIQKLSAELLKLEEWLQEERSQREKLEVELGIEKDCNRVQLSENRRELSELRSALR 427
Query: 386 TLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGE 424
LQ+E + L E+ EL + +E L K+ + E W E
Sbjct: 428 VLQKEKEQLQEEKQELLDYIRVLELRLDKEAD--EKWAE 464
>gnl|CDD|218681 pfam05667, DUF812, Protein of unknown function (DUF812). This
family consists of several eukaryotic proteins of
unknown function.
Length = 536
Score = 34.7 bits (80), Expect = 0.54
Identities = 42/227 (18%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 134 DDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAK 193
DD + + + + +++ + + E T ED K E+ +
Sbjct: 217 DDLADLLSKFRLDSWDKGSRFTRTEKVEQAATAAAEVP--PAEMDTEEDRTKEREAELEA 274
Query: 194 KDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQ 253
E I++L++ +E V ++ S++++ N+ EELE+ K+ +E++
Sbjct: 275 LQEQIDELESSIEEVLSEIKALASKIKQ--VNEELTTVRQENEELEEEYKIKKRTVELLP 332
Query: 254 NHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTD 313
+ E +AKL+A + E + EL + E L + + L+
Sbjct: 333 DAENNVAKLQALVVASSER--------------LLELAQQWEAHRTPLIDEYRSLKEKNR 378
Query: 314 NDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQ 360
N + +I+ L+ + EE++ +L +E +L E+ K
Sbjct: 379 NKEDETQRQLDEIKKLRNKIEELESELQTKEQLYKQLLDEYENAPKS 425
Score = 34.0 bits (78), Expect = 0.82
Identities = 62/304 (20%), Positives = 118/304 (38%), Gaps = 29/304 (9%)
Query: 494 ESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRT 553
E R++ + L+ +A G+SS D + R + SR T
Sbjct: 184 EDYRKRKRQRLDQKAAEYLRQAAQAGTTGSSSADDLADLLSKFRLDSWDKGSR-----FT 238
Query: 554 RVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVE 613
R E++ M+ D T + AE E L E++ L E+ +++
Sbjct: 239 RTEKVEQAATAAAEVPPAEMDTEEDRTKEREAELEALQEQIDELESSIEEVLSEIKALAS 298
Query: 614 KQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQV 673
K K + EE+ + ++ L E+ + K + + + N + ++ALV +
Sbjct: 299 KIKQVNEELTTVRQENEELEEEYKIKKRTVELLPDAENN--------VAKLQALVVASSE 350
Query: 674 EKQALDGKYEE----LKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKN 729
L ++E L ++Y + EK N+ + +D IK L++K EEL L K
Sbjct: 351 RLLELAQQWEAHRTPLIDEYRSLKEKNRNKEDETQRQLDE-IKKLRNKIEELESELQTKE 409
Query: 730 TLDNIKVEKENLEIQLDNLN-----TNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEI 784
L L + +N + Y +I +I++ + I ++ + + EI
Sbjct: 410 QLYK------QLLDEYENAPKSVSRSAYTRRILEIIKNIKKQKEDIDKILSDTRSLQKEI 463
Query: 785 NDLN 788
N++
Sbjct: 464 NNIT 467
>gnl|CDD|217817 pfam03961, DUF342, Protein of unknown function (DUF342). This
family of bacterial proteins has no known function. The
proteins are in the region of 500-600 amino acid
residues in length.
Length = 450
Score = 34.5 bits (80), Expect = 0.55
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 103 ALNEEVSQLKTKENELHSRIEELEDKLQQ-------KIDDEKSVSYQ--LEEKAIEISQL 153
L EE+ +L+ + EL +E+++ L++ ++ EK + LE K +L
Sbjct: 331 ELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETKEKLSEEL 390
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVE 181
E L+EE++ LK++L L +
Sbjct: 391 EE----LEEELKELKEELESLYSEGKIS 414
Score = 33.8 bits (78), Expect = 0.97
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 605 KKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINV 664
K ++E V+ + L+EE+++LEE+ L E+LE ++ + K R ++
Sbjct: 320 KTEIEVGVDFPE-LKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEK------ 372
Query: 665 EALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDI 707
+ + K+ L + EEL+E+ +++ E+ E+ + + +
Sbjct: 373 REQLEKLLETKEKLSEELEELEEELKELKEELESLYSEGKISV 415
Score = 32.6 bits (75), Expect = 2.2
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 233 DVKEELEKLVVEKQELIEVIQNHETLIAKL-EADLTRVKEEKEAEVSGKLEQDAMVKELK 291
++KEEL++L E +EL E ++ + L+ KL + ++ EK ++ LE ++L
Sbjct: 331 ELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLET---KEKLS 387
Query: 292 SKVETLEASLKQKEQELE 309
++E LE LK+ ++ELE
Sbjct: 388 EELEELEEELKELKEELE 405
Score = 30.7 bits (70), Expect = 8.1
Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKG-LEEEIQQLEEDTSILREQLESKD 640
+L E + L+EE+ L +E ++KK L++ +K +G L E ++ E +E+L +
Sbjct: 331 ELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETKEKLSEEL 390
Query: 641 QVDDSIEKTLRNEIQELHA 659
+ + K L+ E++ L++
Sbjct: 391 EELEEELKELKEELESLYS 409
>gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA;
Provisional.
Length = 569
Score = 34.8 bits (81), Expect = 0.55
Identities = 69/358 (19%), Positives = 157/358 (43%), Gaps = 72/358 (20%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
++ E I + EE+ +L E + +E+L+D ++ + L
Sbjct: 114 LDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRE-------LRKSLLANR---FSF 163
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
L++++++L+++ E D +A E ++++L+ EL ++E+ +
Sbjct: 164 GPALDELEKQLENLEEEFSQFVELTESGDYVEARE--------ILDQLEEELAALEQIME 215
Query: 214 EKESEVEEWGNNDAWGASDDVKEELEKL------------VVEKQELIEVIQNHETLIAK 261
E ++E ++ ++L++L ++ ++ + IQ+ + I +
Sbjct: 216 EIPELLKE--------LQTELPDQLQELKAGYRELVEEGYHLDHLDIEKEIQDLKEQIDE 267
Query: 262 LEADLTRVK----EEKEAEVSGKLEQ--DAMVKELKSK--VETLEASLKQKEQEL----- 308
A L + EEK E+ +++Q D + +E+K++ VE +L +
Sbjct: 268 NLALLEELDLDEAEEKNEEIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNK 327
Query: 309 ----------EGWTDNDNWGSSGN--EQDIEALKKENEEIKEKLAKQESTLAKLKTHSES 356
+ +T N++ S E+ +E+L+K+ +EI E++A+QE ++L+ E
Sbjct: 328 ELKEEIDRVKQSYTLNESELESVRQLEKQLESLEKQYDEITERIAEQEIAYSELQEELEE 387
Query: 357 LQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKK 414
+ KQL E E E E+ ++ L L+++ EK+ + +L ++ L+K
Sbjct: 388 ILKQLEEIEKEQEKL---------SEMLQGLRKDELEAREKLERYRNKLHEIKRYLEK 436
Score = 31.7 bits (73), Expect = 4.6
Identities = 52/304 (17%), Positives = 114/304 (37%), Gaps = 68/304 (22%)
Query: 1425 KDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGE 1484
D+ ++ L++Q+ L + L E +E+ Q +++++ ++
Sbjct: 252 LDIEKEIQDLKEQIDENLALLEELD--LDEAEEKNEEIQERIDQLYDIL----------- 298
Query: 1485 PAQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLK 1544
EREV A+ + L L++ +E+ L EI R+ Q+ NE+E
Sbjct: 299 ---EREVKARKYVEKNSDT----LPDFLEHAKEQNKELKEEI--DRVKQSYTLNESELES 349
Query: 1545 QHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQV 1604
L+ + ++ + E ER+ AY+ +E + Q+
Sbjct: 350 VRQLEKQLESLEKQYD-------------EITERIAEQEIAYSELQEE----LEEILKQL 392
Query: 1605 KSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNS 1664
+ + +++EKL E L + + L + L EI + LE
Sbjct: 393 EEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLH--------EIKRYLE--------- 435
Query: 1665 YAKNN------ELTQLISTLQHQLQEARESLSAA----GRLSDQLNQKSQTIQELTEKVN 1714
K+N + ++ + +++ E L ++ L + ++ ++ L E+
Sbjct: 436 --KSNLPGLPEDYLEMFFEVSDEIEALAEELEEKPINMEAVNRLLEEATEDVETLEEETE 493
Query: 1715 QLME 1718
+L+E
Sbjct: 494 ELVE 497
>gnl|CDD|220640 pfam10234, Cluap1, Clusterin-associated protein-1. This protein is
conserved from worms to humans. The protein of 413 amino
acids contains a central coiled-coil domain, possibly
the region that binds to clusterin. Cluap1 expression is
highest in the nucleus and gradually increases during
late S to G2/M phases of the cell cycle and returns to
the basal level in the G0/G1 phases. In addition, it is
upregulated in colon cancer tissues compared to
corresponding non-cancerous mucosa. It thus plays a
crucial role in the life of the cell.
Length = 269
Score = 34.2 bits (79), Expect = 0.56
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQA 677
L +E+ E L LE +EK L+ I+ L A+L ++A ++ + ++
Sbjct: 142 LGKELDLRESRQKALSRPLEL-----AEVEKALKEAIKNLAARLQQLQAELDNLKSDEAN 196
Query: 678 LDGKYEELKEKYEQMSEKFEN 698
L+ K E K++ E+ ++ +
Sbjct: 197 LEAKIERKKQELERTQKRLQA 217
>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome
biogenesis [Translation, ribosomal structure and
biogenesis].
Length = 1077
Score = 34.7 bits (79), Expect = 0.57
Identities = 58/310 (18%), Positives = 109/310 (35%), Gaps = 55/310 (17%)
Query: 500 QKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRT-----R 554
Q S I + + E G + P + + + SR + LS ++ + T
Sbjct: 384 QLFSNSDAIDTVDRESSEIDNVGRKTRRQPTGKAIAEETSREDELSFDDSDVSTSDENED 443
Query: 555 VEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKL------ 608
V+ G N ESD + D+ +Q + L + + S+ K
Sbjct: 444 VDFTGKKGAINNEDESDNEEVAFDSDSQFDESEGNLRWKEGLASKLAYSQSGKRGRNIQK 503
Query: 609 ---------EQAVEKQKG-----LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEI 654
E+ +E+ KG E ++ +E + + + + EK + +E
Sbjct: 504 IFYDESLSPEECIEEYKGESAKSSESDLVVQDEPEDFFDVSKVANESISSNHEKLMESEF 563
Query: 655 QELHAKLINVEALVN-------------QAQVEKQALDGKYEELKEKYEQMSEKFENQTG 701
+EL K ++ L + + ++ + G +E+L+++ + E G
Sbjct: 564 EELKKKWSSLAQLKSRFQKDATLDSIEGEEELIQDDEKGNFEDLEDEENSSDNEMEESRG 623
Query: 702 ----------KDSVDIDTLIKNLQSKKEELC-------RLLDEKNTLDNIKVEKENLEIQ 744
D VD +T + KKEEL R EK +D EK +E Q
Sbjct: 624 SSVTAENEESADEVDYETEREENARKKEELRGNFELEERGDPEKKDVDWYTEEKRKIEEQ 683
Query: 745 LDNLNTNYQD 754
L + ++
Sbjct: 684 LKINRSEFET 693
>gnl|CDD|236277 PRK08493, PRK08493, NADH dehydrogenase subunit G; Validated.
Length = 819
Score = 34.7 bits (80), Expect = 0.57
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 11/115 (9%)
Query: 157 NRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKE 216
+FL+EE ++ L + +++ E E K E E+ E V+K + +K
Sbjct: 440 KKFLEEE--AILKSLEEFKQSIVKEAALSILEEIREKVLEQAEQGCENQEEVKKEVPKKV 497
Query: 217 SEVEEWGNNDAW---GASDDVKEELEKLVVEKQELIEVIQN----HE--TLIAKL 262
++ E G +++ E+LE L+ +K V+ H+ +AKL
Sbjct: 498 KKIPEVDTYLLLEELGINEETYEKLEALLAKKNNFTLVVGEDLYAHKNAKNLAKL 552
>gnl|CDD|204414 pfam10211, Ax_dynein_light, Axonemal dynein light chain. Axonemal
dynein light chain proteins play a dynamic role in
flagellar and cilia motility. Eukaryotic cilia and
flagella are complex organelles consisting of a core
structure, the axoneme, which is composed of nine
microtubule doublets forming a cylinder that surrounds a
pair of central singlet microtubules. This
ultra-structural arrangement seems to be one of the most
stable micro-tubular assemblies known and is responsible
for the flagellar and ciliary movement of a large number
of organisms ranging from protozoan to mammals. This
light chain interacts directly with the N-terminal half
of the heavy chains.
Length = 189
Score = 33.7 bits (78), Expect = 0.57
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 578 DNTAQLTAEKERLDEEVTVLSQENIELKKKLEQA--------VEKQKGLEEEIQQLEEDT 629
++L E ++L+EE L + EL+ KLE ++K +EI L++
Sbjct: 120 QGKSELEQEIKKLEEEKEELEKRVAELEAKLEAIEKREEEERQIEEKRHADEIAFLKKQN 179
Query: 630 SILREQLES 638
L+ QLE
Sbjct: 180 QQLKSQLEQ 188
>gnl|CDD|178867 PRK00106, PRK00106, hypothetical protein; Provisional.
Length = 535
Score = 34.5 bits (79), Expect = 0.60
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 925 EKCKQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQ 984
++ KQ E + E ++LD K + S+KE+ ++K L+ + + ++++ E+ +
Sbjct: 97 QELKQIESRLTERATSLDRKDENLSSKEKTLESKEQSLTDKSKHIDEREEQVEKLEEQKK 156
Query: 985 ALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKL 1043
A E + + + E R+I+ + E + KL EIA++ I+ E +VK+ DK+
Sbjct: 157 A--ELERVAALSQAEAREII------LAETENKLTHEIATR---IREAEREVKDRSDKM 204
>gnl|CDD|227608 COG5283, COG5283, Phage-related tail protein [Function unknown].
Length = 1213
Score = 34.5 bits (79), Expect = 0.65
Identities = 63/397 (15%), Positives = 138/397 (34%), Gaps = 52/397 (13%)
Query: 611 AVEKQKGLEEEIQQLEEDTSILREQLE-SKDQVDDSIEKTLRNEIQELHAKLINVEALVN 669
AV+ L+ I+ + +L +Q + +KD + S K + L + +
Sbjct: 20 AVKNINVLKSSIKDSTQFWKMLEKQQKLTKDGLSASKGKY-----EGLSEAMEKQKKAYE 74
Query: 670 QAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKN 729
+ E + ++ + K+ Y+ ++ Q + + +L E+L
Sbjct: 75 DLKQEVKEVNRATQASKKAYQ----EYNAQYTQAENKLRSLSGQFGVASEQL-------- 122
Query: 730 TLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNK 789
+ E + L+ + LN + + L Q+ N +++ + + + LNK
Sbjct: 123 --MLQQKEIQRLQYAISTLNKSMAAQARLLEQTGNKFGTADAKVVGLRESFGRQTEALNK 180
Query: 790 RISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIEASNHKIQQLTQETDTLKA 849
++ ++ L LDE ++ ++ + E ++ S Q++Q + L
Sbjct: 181 QLER-------TKKVADALTYVLDEAQQKLSQALSARLERLQES---RTQMSQSSGQLGK 230
Query: 850 ELVAQAESTQLVKQEQALLAA--APVDDNIVIENQQLKQNLESVKQ---------ENTLV 898
L + A LA A + + Q + ++ KQ + T
Sbjct: 231 RLETDKAGAGALGLLGAALAGSFAAIGAAVRRTAQMNGELMDKTKQVKGARDNLGKVTSQ 290
Query: 899 VENLQNLIAQKDYEINAKVTELSIIMEKCKQYEDKCIELESTLDAKLTDFSTKEQL-NKN 957
E + + I + I ELS + A + +E
Sbjct: 291 GEEMSDAIQETAEHIKDSGRELS--------KAAAIGAAAAMGVAAGKFPTGQEAKPTLK 342
Query: 958 KMAELSAMLESVQAENISIKQMNEELQALTETLKQTS 994
+MA ++A+ + A N+ ++N+ L LK +
Sbjct: 343 EMARVAAL--TATAFNLPADELNDNLAKWAGELKFPA 377
>gnl|CDD|233467 TIGR01554, major_cap_HK97, phage major capsid protein, HK97 family.
This model family represents the major capsid protein
component of the heads (capsids) of bacteriophage HK97,
phi-105, P27, and related phage. This model represents
one of several analogous families lacking detectable
sequence similarity. The gene encoding this component is
typically located in an operon encoding the small and
large terminase subunits, the portal protein and the
prohead or maturation protease [Mobile and
extrachromosomal element functions, Prophage functions].
Length = 384
Score = 34.3 bits (79), Expect = 0.72
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Query: 198 IEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHET 257
+++L+ L + K LR+ + + + D +KEE++KL I+ ++
Sbjct: 1 LKELREALAELAKELRKLTEDEKLAEAEEEKAEYDALKEEIDKL----DAEIDRLEELLD 56
Query: 258 LIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLK 302
+ A +E E K E L+ + L K
Sbjct: 57 ELEAKPAASGEGGGGEEEEEEAKAEAAEFRAYLRGGDDALAEERK 101
Score = 33.9 bits (78), Expect = 0.83
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 160 LQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEV 219
L+E + L +LR L E+ + + ++ A K+E I+KL AE++ +E+ L E E++
Sbjct: 4 LREALAELAKELRKLTEDEKLAEAEEEKAEYDALKEE-IDKLDAEIDRLEELLDELEAKP 62
Query: 220 EE 221
Sbjct: 63 AA 64
Score = 31.6 bits (72), Expect = 4.4
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 287 VKELKSKVETLEASL-KQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQES 345
+KEL+ + L L K E E + + +++I+ L E + ++E L + E+
Sbjct: 1 LKELREALAELAKELRKLTEDEKLAEAEEEKAEYDALKEEIDKLDAEIDRLEELLDELEA 60
Query: 346 TLAKLKTHSESLQKQLLEKEMELEE 370
A +++ K E
Sbjct: 61 KPAASGEGGGGEEEEEEAKAEAAEF 85
>gnl|CDD|234701 PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.
Length = 865
Score = 34.3 bits (80), Expect = 0.73
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 50/149 (33%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHN 157
+ LNE+ + LK L ++ EL ++ + L E
Sbjct: 690 EAALEYLNEQEALLKELAALLKAKPSELPER---------------------VEALLEEL 728
Query: 158 RFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEV--IEKLKAELESVE-KALRE 214
+ L++E++ LK KL A +A+ EV ++ L A++E V+ KALR
Sbjct: 729 KELEKELEQLKAKL-----------AAAAAGDLLAQAKEVNGVKVLAAQVEGVDAKALRT 777
Query: 215 KESEVEEWGNNDAWGASDDVKEELEKLVV 243
+DD+K++L VV
Sbjct: 778 ---------------LADDLKDKLGSGVV 791
Score = 32.0 bits (74), Expect = 3.5
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Query: 590 LDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESK---------- 639
L+E+ +L + LK K + E+ + L EE+++LE++ L+ +L +
Sbjct: 696 LNEQEALLKELAALLKAKPSELPERVEALLEELKELEKELEQLKAKLAAAAAGDLLAQAK 755
Query: 640 ---------DQVDDSIEKTLRNEIQELHAKL 661
QV+ K LR +L KL
Sbjct: 756 EVNGVKVLAAQVEGVDAKALRTLADDLKDKL 786
>gnl|CDD|225638 COG3096, MukB, Uncharacterized protein involved in chromosome
partitioning [Cell division and chromosome partitioning].
Length = 1480
Score = 34.5 bits (79), Expect = 0.76
Identities = 44/235 (18%), Positives = 91/235 (38%), Gaps = 32/235 (13%)
Query: 975 SIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQ---ELDAKLAEEIASKTSIIQT 1031
S ++ E QA E + + E+ + + + +L +A E+A +
Sbjct: 439 SAEEWLETFQAKEEEATEKLLSLEQKMSMAQAAHSQFEQAYQLVVAIAGELARSEAWDVA 498
Query: 1032 LEIQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDL 1091
+EL + H+ ++ R ++ ELEQ + R + + + +F + D
Sbjct: 499 -----RELLREGPDQRHLAEQVQPLRMRLSELEQ-RLRQQQSAERLLADFCKRQGKNLDA 552
Query: 1092 QTQLDTYNAKITHAALVEQ---ELGEMKNQMQTLEYEKQELLKQIQE-ESIASNFLK--N 1145
+ L+ + + AL+E + + Q L E+++L +IQ A +L N
Sbjct: 553 EE-LEALHQE--LEALIESLSDSVSNAREQRMALRQEQEQLQSRIQSLMQRAPVWLAAQN 609
Query: 1146 ELQSLQ--------DAFSVMKSDNASLLLEKNTLME------TKLTLEAQLKELA 1186
L+ L D+ V + L E+ +E K L+ +++ L+
Sbjct: 610 ALEQLSEQSGEEFTDSQDVTEYMQQLLEREREATVERDELGARKNALDEEIERLS 664
Score = 34.1 bits (78), Expect = 0.99
Identities = 75/396 (18%), Positives = 147/396 (37%), Gaps = 41/396 (10%)
Query: 537 RESRIEMLSRENEGLRTRVEQLGL--VIENNYVQESDPMNNSLDNTAQLTAEK-ERLDEE 593
R+ R + R E G +E +Y SD +N L TA EK ER +
Sbjct: 299 RQQLAAEQYRHVDMSRELAELNGAEGDLEADYQAASDHLN--LVQTALRQQEKIERYQAD 356
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE 653
+ L+ E + +E+A E+Q+ E + E + L+ QL Q D +++T +
Sbjct: 357 LEELTIRLEEQNEVVEEANERQEENEARAEAAELEVDELKSQLADYQQALD-VQQTRAIQ 415
Query: 654 IQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKN 713
Q+ A L + L + + + + E + K E+ +EK + K S+
Sbjct: 416 YQQAIAALERAKELCHLPDLTADSAEEWLETFQAKEEEATEKLLSLEQKMSMA-QAAHSQ 474
Query: 714 LQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISEL 773
+ + + + E + V +E L D + L + L ++SEL
Sbjct: 475 FEQAYQLVVAIAGELARSEAWDVARELLREGPDQRH---------LAEQVQPLRMRLSEL 525
Query: 774 NN---AQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENI 830
Q + + D KR + + L + L+ ++ ++ + E
Sbjct: 526 EQRLRQQQSAERLLADFCKR-----QGKNLDAEELEALHQELEALIESLSDSVSNAREQR 580
Query: 831 EASNHKIQQLTQETDTLKAE----LVAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQ 886
A + +QL +L L AQ QL +Q ++Q + +
Sbjct: 581 MALRQEQEQLQSRIQSLMQRAPVWLAAQNALEQLSEQSGEEFT----------DSQDVTE 630
Query: 887 NLESV-KQENTLVVENLQNLIAQKDYEINAKVTELS 921
++ + ++E VE + + + ++ ++ LS
Sbjct: 631 YMQQLLEREREATVERDE--LGARKNALDEEIERLS 664
Score = 31.8 bits (72), Expect = 5.1
Identities = 39/216 (18%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 976 IKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSII--QTLE 1033
I+Q+N L L N +++ R D+ K+ V L+ + + +++ ++L
Sbjct: 838 IRQLNSRRNELERALSNHENDNQQQRIQFDQAKEGVTALN-----RLIPQLNLLADESLA 892
Query: 1034 IQVKELQDKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQW---IHEFEVKTNTLSD 1090
+V+E++++L + Q+ + + +LE I + L+++ Q+ ++
Sbjct: 893 DRVEEIRERLDEAQEAARFIQQHGNTLSKLEPIASVLQSDPEQFEQLKEDYAQAQQMQRQ 952
Query: 1091 LQTQLDTYNAKITHAA-LVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQS 1149
+ Q + A + EM ++ L + ++ L+Q + E + + +L+
Sbjct: 953 ARQQAFALTEVVQRRAHFSYSDSAEMLSENSDLNEKLRQRLEQAEAERTRA---REQLRQ 1009
Query: 1150 LQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLKEL 1185
Q S ASL +T E L+ +L+++
Sbjct: 1010 HQAQLSQYNQVLASLKSSYDTKKELLNELQQELQDI 1045
Score = 31.4 bits (71), Expect = 6.2
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 1565 IQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDV 1624
++++ +L EA+E A + + ++E + S ++S EQ E+L+E QA+ +
Sbjct: 895 VEEIRERLDEAQE-----AARFIQQHGNTLSKLEPIASVLQSDPEQFEQLKEDYAQAQQM 949
Query: 1625 VQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQE 1684
++ + L V+++ ++ A+ L+ + N +L Q + + +
Sbjct: 950 QRQARQQAFALTEVVQRRAHFSYSDSAEM-------LSENSDLNEKLRQRLEQAEAERTR 1002
Query: 1685 ARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEV 1730
ARE L QL+Q +Q + L + E LN+ + +L+++
Sbjct: 1003 AREQLRQH---QAQLSQYNQVLASLKSSYDTKKELLNELQQELQDI 1045
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional.
Length = 995
Score = 34.2 bits (79), Expect = 0.78
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 900 ENLQNLIAQKDYEIN--AKVTELSIIMEKCKQYEDKCIELESTLDAKLT---------DF 948
L LI + I+ AK+ +S+I ++ E +D K+ D
Sbjct: 868 AELIELIESAENLISTLAKIGSVSVIPPIEEEAEVPKGCGFDVVDNKVIIYLNLDEFIDL 927
Query: 949 STKEQLNKNKMAELSAMLESVQAE-NI---------SIKQMNEE-LQALTETLKQTSNTH 997
+ + K+A+L LES + +I ++++N+E + L E +KQ
Sbjct: 928 KKELAKLEKKLAKLQKSLESYLKKISIPNYEDKVPEDVRKLNDEKIDELNEEIKQLEQAI 987
Query: 998 EEDRKIL 1004
EE + +L
Sbjct: 988 EELKSLL 994
>gnl|CDD|218464 pfam05142, DUF702, Domain of unknown function (DUF702). Members of
this family are found in various putative zinc finger
proteins.
Length = 155
Score = 32.8 bits (75), Expect = 0.82
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 10/71 (14%)
Query: 1775 RQKIGLEPSQAFNPNQSLSEAFIQFLESESSPRSK--AQSSTPVSRRTSSTTSPLLFPES 1832
R++ + N S + A PR S+ S RT S TSP S
Sbjct: 50 RERQQQLAAATSNAASSAASA------PSKRPRDLLSNAQSSLSSTRTPSGTSPQGTGTS 103
Query: 1833 ALPSLPQFSTM 1843
+ P P+ S+
Sbjct: 104 SFP--PEVSSP 112
>gnl|CDD|223683 COG0610, COG0610, Type I site-specific restriction-modification
system, R (restriction) subunit and related helicases
[Defense mechanisms].
Length = 962
Score = 33.9 bits (78), Expect = 0.91
Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 19/263 (7%)
Query: 603 ELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLI 662
EL +KLE + + K E+I LE+ +LR+ + + K L
Sbjct: 681 ELVEKLEDVLNEFKEQSEDIGYLEDAGELLRDFAPELEIKVERGNKILAKLFGRFLKAFN 740
Query: 663 NVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEELC 722
++ L A ++ + + LK + E+ + D+++ IK
Sbjct: 741 ALKKLYEFAYTLEEEIQYLEDLLKARLEKDYQSKYLDL-IDNLNDAREIK---------- 789
Query: 723 RLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISEL-NNAQHNKN 781
+ LD+I E E + Q N+ D I L+Q+ ND L +
Sbjct: 790 DKESKAIDLDDIDFELELIGKQEINI-----DYILELLQTFNDKNGAYESLKELIERIIK 844
Query: 782 NEINDLNKRISLFEE-NNAFLQRSILDLERNLD-EKLKEFNEKEISYNENIEASNHKIQQ 839
I DL ++ L E A Q L+ E+L +KE + + E ++
Sbjct: 845 EWIEDLRQKKKLIERLIEAINQYRAKKLDTAEKLEELYILAKKEEEFKQFAEEEGLNEEE 904
Query: 840 LTQETDTLKAELVAQAESTQLVK 862
L D T+LV+
Sbjct: 905 LAFYDDLALNGGKLPENGTELVE 927
>gnl|CDD|226513 COG4026, COG4026, Uncharacterized protein containing TOPRIM domain,
potential nuclease [General function prediction only].
Length = 290
Score = 33.3 bits (76), Expect = 0.93
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 84 VRNGFELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQL 143
VR G + + V +Y + L E+ +LK K EL EEL +L++ + + V +L
Sbjct: 117 VRAGLKTLQRVPEYMD----LKEDYEELKEKLEELQKEKEELLKELEELEAEYEEVQERL 172
Query: 144 EEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVED 182
+ +E S+L E + L E+ LK + +L+ V + +
Sbjct: 173 KRLEVENSRLEEMLKKLPGEVYDLKKRWDELEPGVELPE 211
>gnl|CDD|235316 PRK04863, mukB, cell division protein MukB; Provisional.
Length = 1486
Score = 33.8 bits (78), Expect = 1.1
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 13/177 (7%)
Query: 1556 SELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEAL--TSQVKSLTEQKEK 1613
+L + + ++ +L E E Y +AS N AL +++ E+
Sbjct: 300 RQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYQADLEE 359
Query: 1614 LQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQ 1673
L+E+L + +VV++ + E + E D E+ L Q L+ + + Q
Sbjct: 360 LEERLEEQNEVVEEADEQQEENEARAEAAEEEVD-ELKSQLADYQQALDVQQTRAIQYQQ 418
Query: 1674 LISTLQHQLQEARE-----SLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKEA 1725
+ L+ A++ L+A D L + QE TE++ L ++L+ +A
Sbjct: 419 AVQA----LERAKQLCGLPDLTADN-AEDWLEEFQAKEQEATEELLSLEQKLSVAQA 470
Score = 33.4 bits (77), Expect = 1.6
Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 16/158 (10%)
Query: 759 LIQSKNDLEAKISELN---NAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEK 815
L + L ++SEL Q + + KR+ ++ L++ L+ L+ +
Sbjct: 511 LAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQ----LQEELEAR 566
Query: 816 LKEFNEKEISYNENIEASNHKIQQLTQETDTLKAE----LVAQAESTQLVKQ-EQALLAA 870
L+ +E E A +++QL L A L AQ +L +Q + +
Sbjct: 567 LESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDS 626
Query: 871 APVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQ 908
V + + QQL + + E + Q L +
Sbjct: 627 QDVTEYM----QQLLERERELTVERDELAARKQALDEE 660
Score = 32.6 bits (75), Expect = 2.5
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 1595 QQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSL 1654
+Q++ L ++ L ++ + Q + ++ +L + + LEQ Q E + + +SL
Sbjct: 513 EQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD-EDELEQLQEELEARL-ESL 570
Query: 1655 EFLQGELNNSY----AKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELT 1710
E + +L I L + + A RL +Q ++ + Q++T
Sbjct: 571 SESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVT 630
Query: 1711 EKVNQLMEEL 1720
E + QL+E
Sbjct: 631 EYMQQLLERE 640
Score = 31.9 bits (73), Expect = 4.5
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 537 RESRIEMLSRENEGLRTRVEQLGL---VIENNYVQESDPMNNSLDNTAQLTAEKERLDEE 593
RE RIE L E E L R L ++ + S + + L + E E
Sbjct: 784 REKRIEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAFEADPE-----AE 838
Query: 594 VTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE 653
+ L++ +EL++ L +++ +++Q +E S L L + + D TL +
Sbjct: 839 LRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADE---TLADR 895
Query: 654 IQELHAKLINVE---ALVNQ-----AQVEKQA--LD---GKYEELKEKYEQMSEKFENQ 699
++E+ +L E V Q AQ+E L ++E+LK+ Y+Q + +
Sbjct: 896 VEEIREQLDEAEEAKRFVQQHGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDA 954
Score = 30.7 bits (70), Expect = 9.6
Identities = 57/307 (18%), Positives = 130/307 (42%), Gaps = 23/307 (7%)
Query: 1435 EKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQ 1494
+ + E R+L ++ QL+ Q +L E+ + ++ + E+D E Q+ + +
Sbjct: 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLE--QDYQAASD 335
Query: 1495 HVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDN 1554
H+ V+T+ + E R Q EE L E N++ + ENE + + ++
Sbjct: 336 HLNLVQTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDEL 395
Query: 1555 TSELVKAEQTIQDLHVK----------LREAEERVKSSATAYTSASVRSNQQVEALTSQV 1604
S+L +Q + + L A++ +A +E ++
Sbjct: 396 KSQLADYQQALDVQQTRAIQYQQAVQALERAKQLCGLPDLTADNAEDW----LEEFQAKE 451
Query: 1605 KSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNS 1664
+ TE+ L++KL A+ + + + ++ + + + ++A+ L E +
Sbjct: 452 QEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHL 511
Query: 1665 YAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNKKE 1724
+ +L +S L+ +L++ + A RL + ++ + +++ QL EEL E
Sbjct: 512 AEQLQQLRMRLSELEQRLRQQQR----AERLLAEFCKRLGKNLDDEDELEQLQEEL---E 564
Query: 1725 AKLKEVN 1731
A+L+ ++
Sbjct: 565 ARLESLS 571
>gnl|CDD|232931 TIGR00344, alaS, alanine--tRNA ligase. The model describes
alanine--tRNA ligase. This enzyme catalyzes the reaction
(tRNAala + L-alanine + ATP = L-alanyl-tRNAala +
pyrophosphate + AMP) [Protein synthesis, tRNA
aminoacylation].
Length = 851
Score = 33.9 bits (78), Expect = 1.1
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHN 157
N I LNE+ +LK + L EL K+++ ++ K++ +LE ++I+
Sbjct: 697 NAAIEYLNEQEDKLKELADILKVTPNELPKKIERFFEEWKALQKELESLKLKIADQ---- 752
Query: 158 RFLQEEMQSLKDKLRDLDE-NVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKE 216
++ LKDK ++ V VE + + ++ + ++LK++L S L
Sbjct: 753 -----KIDELKDKAETINGVKVLVEVVDAKDMKSLK---TMADRLKSKLGSAIYVLASFA 804
Query: 217 SE 218
+
Sbjct: 805 NG 806
Score = 33.1 bits (76), Expect = 1.7
Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 21/129 (16%)
Query: 647 EKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKY-----EQMSEKFENQTG 701
E L+ L + + + E +AL + E LK K +++ +K E G
Sbjct: 707 EDKLKELADILKVTPNELPKKIERFFEEWKALQKELESLKLKIADQKIDELKDKAETING 766
Query: 702 ----------KDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTN 751
KD + T+ L+SK +L K L + N N
Sbjct: 767 VKVLVEVVDAKDMKSLKTMADRLKSKLGSAIYVLASFAN------GKVKLVCGVSNDVLN 820
Query: 752 YQDKINTLI 760
K LI
Sbjct: 821 KGIKAGELI 829
>gnl|CDD|234084 TIGR03007, pepcterm_ChnLen, polysaccharide chain length determinant
protein, PEP-CTERM locus subfamily. Members of this
protein family belong to the family of polysaccharide
chain length determinant proteins (pfam02706). All are
found in species that encode the PEP-CTERM/exosortase
system predicted to act in protein sorting in a number of
Gram-negative bacteria, and are found near the epsH
homolog that is the putative exosortase gene [Cell
envelope, Biosynthesis and degradation of surface
polysaccharides and lipopolysaccharides].
Length = 498
Score = 33.5 bits (77), Expect = 1.1
Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 53/278 (19%)
Query: 1011 VQELDAKLAEE-IASK----TSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKVYELEQ 1065
VQ L EE + SK S + ++ Q+K + KL + EN L ++ + +
Sbjct: 140 VQTLLTIFVEETLGSKRQDSDSAQRFIDEQIKTYEKKLEA---AENRLKAFKQENGGILP 196
Query: 1066 IQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYE 1125
Q +S+ Q +L+ ++ A + +K Q L E
Sbjct: 197 DQEGDYYSE-------------ISEAQEELEAARLELNEA---IAQRDALKRQ---LGGE 237
Query: 1126 KQELLKQIQEESIASNFLKNELQSLQ---DAFSVMKSDNASLLLEKNTLMETKLTLEAQL 1182
+ LL S+A++ L +++L+ DA + +D ++ + LE Q
Sbjct: 238 EPVLLA---GSSVANSELDGRIEALEKQLDALRLRYTDKHPDVIATKREIAQ---LEEQK 291
Query: 1183 KELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTGAPDLNASIENILKEKDAT 1242
+E + + + ++L ELA +A IA+L + A
Sbjct: 292 EEEGSAKNGGPERGEIANPVYQQLQIELAEAEAEIASLEA----------------RVAE 335
Query: 1243 LSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALE 1280
L+ +++ E+ +T+ E++A L + L+ Y+ K E
Sbjct: 336 LTARIERLESLLRTIPEVEAELTQ-LNRDYEVNKSNYE 372
Score = 32.7 bits (75), Expect = 2.2
Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 51/252 (20%)
Query: 456 QEELLKQALIDKENELSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQ 515
Q + ++ L EN L + Q N P E +++L ++ +++ Q
Sbjct: 169 QIKTYEKKLEAAENRLKAFKQENGGILPDQE--GDYYSEISEAQEELEAARLELNEAIAQ 226
Query: 516 LEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNN 575
+A ++ + S N L R+E L
Sbjct: 227 RDALKRQLGGEEPVLLAG----------SSVANSELDGRIEAL---------------EK 261
Query: 576 SLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEE-------IQQLEED 628
LD L +V +E +L+++ E+ + G E QQL+ +
Sbjct: 262 QLD---ALRLRYTDKHPDVIATKREIAQLEEQKEEEGSAKNGGPERGEIANPVYQQLQIE 318
Query: 629 TSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVN---QAQVEKQALDGKYEEL 685
+ ++ S L + EL A++ +E+L+ + + E L+ YE
Sbjct: 319 LAEAEAEIAS-----------LEARVAELTARIERLESLLRTIPEVEAELTQLNRDYEVN 367
Query: 686 KEKYEQMSEKFE 697
K YEQ+ + E
Sbjct: 368 KSNYEQLLTRRE 379
>gnl|CDD|130141 TIGR01069, mutS2, MutS2 family protein. Function of MutS2 is
unknown. It should not be considered a DNA mismatch
repair protein. It is likely a DNA mismatch binding
protein of unknown cellular function [DNA metabolism,
Other].
Length = 771
Score = 33.6 bits (77), Expect = 1.1
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 637 ESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKF 696
E K++++ IEK L +EL K ++E L+ + + K+ L+ + EELKE+ +
Sbjct: 508 EFKEEINVLIEK-LSALEKELEQKNEHLEKLLKEQEKLKKELEQEMEELKERERNKKLEL 566
Query: 697 ENQTGKDSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKI 756
E + + +K L+ + E + R L EK +++ ++L K
Sbjct: 567 EKEAQE-------ALKALKKEVESIIRELKEKKIHKAKEIKSIEDLVKLKETKQKIPQKP 619
Query: 757 NTLIQSKNDLEAKISELNNAQHNKNNEINDLNK 789
K + +I Q K +I NK
Sbjct: 620 TNFQADKIGDKVRI--RYFGQKGKIVQILGGNK 650
Score = 32.5 bits (74), Expect = 2.9
Identities = 31/195 (15%), Positives = 72/195 (36%), Gaps = 10/195 (5%)
Query: 1109 EQELGEMKNQMQTLEYEKQELLKQIQE-ESIASNFLKNELQSLQDAFSVMKSDNASL--- 1164
EQ+ ++ ++ E K+EL ++++E + N + Q+A +K + S+
Sbjct: 528 EQKNEHLEKLLKEQEKLKKELEQEMEELKERERNKKLELEKEAQEALKALKKEVESIIRE 587
Query: 1165 LLEKNTLMETKLTLEAQLKELADNETQYKQMQIVYEDTQRKLNEELARRDATIATLNTTG 1224
L EK ++ L +L + + + Q ++ + + + G
Sbjct: 588 LKEKKIHKAKEIKSIEDLVKLKETKQKIPQKPTNFQADKIGDKVRIRYFGQKGKIVQILG 647
Query: 1225 APDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTE 1284
N ++ + + + E + K+ K + K + + L+LR +
Sbjct: 648 GNKWNVTVGGMRMKVHGSELEKINKAPPPKKF------KVPKTTKPEPKEASLTLDLRGQ 701
Query: 1285 DLEYKLQEKEKMIQE 1299
E L EK + +
Sbjct: 702 RSEEALDRLEKFLND 716
Score = 31.7 bits (72), Expect = 4.9
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 95 EDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLT 154
E+ N I L+ +L+ K L ++E E +K +++ + E+ ++
Sbjct: 511 EEINVLIEKLSALEKELEQKNEHLEKLLKEQE--KLKKELEQEMEELKERERNKKLELEK 568
Query: 155 EHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAE 204
E L+ + ++ +R+L E KK +++ K E + KLK
Sbjct: 569 EAQEALKALKKEVESIIRELKE-------KKIHKAKEIKSIEDLVKLKET 611
Score = 30.9 bits (70), Expect = 7.8
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 32/204 (15%)
Query: 105 NEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEM 164
+ K + N L ++ LE +L+QK + LE+ E +L + L++EM
Sbjct: 503 KTFYGEFKEEINVLIEKLSALEKELEQKNE-------HLEKLLKEQEKLKKE---LEQEM 552
Query: 165 QSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGN 224
+ LK++ R+ E K+A E+ ++ LK E+ES+ + L+EK+ +
Sbjct: 553 EELKERERNKKL----ELEKEAQEA--------LKALKKEVESIIRELKEKKIHKAK--- 597
Query: 225 NDAWGASDDVKEELEKLVVEKQELIEVIQNHE-TLIAKLEADLTRVKEEKEAEVSGKLEQ 283
E+L KL KQ++ + N + I ++ K ++ G +
Sbjct: 598 ------EIKSIEDLVKLKETKQKIPQKPTNFQADKIGDKVRIRYFGQKGKIVQILGGNKW 651
Query: 284 DAMVKELKSKVETLEASLKQKEQE 307
+ V ++ KV E K
Sbjct: 652 NVTVGGMRMKVHGSELEKINKAPP 675
Score = 30.9 bits (70), Expect = 8.0
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 592 EEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLR 651
EE+ VL ++ L+K+LEQ E + L +E ++L+++ E+L+ + + + + L
Sbjct: 511 EEINVLIEKLSALEKELEQKNEHLEKLLKEQEKLKKELEQEMEELKER---ERNKKLELE 567
Query: 652 NEIQELHAKLIN-VEALVNQAQVEK---------QALDGKYEELKEKYEQMSEKFENQTG 701
E QE L VE+++ + + +K K +E K+K Q F+
Sbjct: 568 KEAQEALKALKKEVESIIRELKEKKIHKAKEIKSIEDLVKLKETKQKIPQKPTNFQADKI 627
Query: 702 KDSVDIDT 709
D V I
Sbjct: 628 GDKVRIRY 635
>gnl|CDD|234799 PRK00578, prfB, peptide chain release factor 2; Validated.
Length = 367
Score = 33.3 bits (77), Expect = 1.1
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 703 DSVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNT-NYQDKINTLIQ 761
+I +K+L K E + +LD +D +K E LE + ++ + N Q++ + +
Sbjct: 1 MINEISERLKDLDEKLENIRGVLD----VDALKERLEELEAEAEDPDFWNDQERAQKVTK 56
Query: 762 SKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNE 821
+ L+AK+ L + ++DL + + L EE + + ++ + E L K+
Sbjct: 57 ELSSLKAKLDTLEELR----QRLDDLEELLELAEEEDD--EETLAEAEAELKALEKKLAA 110
Query: 822 KEI 824
E+
Sbjct: 111 LEL 113
>gnl|CDD|222290 pfam13654, AAA_32, AAA domain. This family includes a wide variety
of AAA domains including some that have lost essential
nucleotide binding residues in the P-loop.
Length = 509
Score = 33.6 bits (78), Expect = 1.1
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 29/131 (22%)
Query: 585 AEKERLDEEVTVLSQENIELKKKLEQAVEKQK--------GL------------EEEIQQ 624
A KE ++EE ++ E ++LE+ +++ G EEE +
Sbjct: 115 ARKEEIEEE---FQEKREEAFEELEEEAKEKGFALVRTPGGFVFAPLKDGEPLTEEEFEA 171
Query: 625 LEEDTSILREQLESK-DQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYE 683
L E+ RE+LE K D++++ +++ LR +++EL + +++ +V A+ +
Sbjct: 172 LPEE---EREELEEKIDELEEELQEILR-QLRELEREAREKLRELDR-EVALFAVGPLLD 226
Query: 684 ELKEKYEQMSE 694
ELKEKY + +
Sbjct: 227 ELKEKYADLPK 237
>gnl|CDD|224482 COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].
Length = 352
Score = 33.5 bits (77), Expect = 1.1
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 1615 QEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQL 1674
+ L QAE + +A L NL+ L QA AQ L+ Q E + EL Q
Sbjct: 90 RAALEQAEAALAAAEAQLRNLRAQLASAQALIAQAEAQDLDQAQNE----LERRAELAQR 145
Query: 1675 ISTLQHQLQEARESLSAA-GRLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEV 1730
+ +L AR +L AA L+ + Q + L +V+ ++ EA L +
Sbjct: 146 GVVSREELDRARAALQAAEAALAAAQAAQKQNLALLESEVSGAQAQVASAEAALDQA 202
>gnl|CDD|219737 pfam08172, CASP_C, CASP C terminal. This domain is the C-terminal
region of the CASP family of proteins. It is a Golgi
membrane protein which is thought to have a role in
vesicle transport.
Length = 245
Score = 33.1 bits (76), Expect = 1.1
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 238 LEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETL 297
LE+L E L ++ + L AKLE DL V + E + +M+ ++
Sbjct: 1 LEELQKELSSLNAKLEEQQELNAKLENDLATV--QDEISNRRFNDNASMISGGTRRIPNR 58
Query: 298 EASLKQKEQELEGWTDNDNWGSSGNEQDI-----EALKKENEEIKEKLAKQESTLAKLKT 352
S K + G S + I + +K N E++E+L KQ T++ L+
Sbjct: 59 GGSGKLSPTS----SIIGGPGGSSSILPIITSQRDRFRKRNTELEEELRKQNQTISSLRR 114
Query: 353 HSESLQK---QLLEK 364
ESL+ +L EK
Sbjct: 115 ELESLKADNIKLYEK 129
>gnl|CDD|218434 pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1
mutation causes misplacement of the septum during cell
division, resulting in the formation of small, circular,
anucleate mini-cells. Inactivation of divIVA produces a
mini-cell phenotype, whereas overproduction of DivIVA
results in a filamentation phenotype. These proteins
appear to contain coiled-coils.
Length = 131
Score = 31.9 bits (73), Expect = 1.3
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 324 QDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
+D EAL KENEE+KE++ + E L + K E+LQK L+ + EE
Sbjct: 32 KDYEALYKENEELKEEIERLEEKLEEYKELEETLQKTLVVAQETAEE 78
>gnl|CDD|221268 pfam11853, DUF3373, Protein of unknown function (DUF3373). This
family of proteins are functionally uncharacterized.
This protein is found in bacteria. Proteins in this
family are typically between 472 to 574 amino acids in
length.
Length = 485
Score = 33.3 bits (76), Expect = 1.3
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 20/67 (29%)
Query: 318 GSSGNEQD----IEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGN 373
++ + D IEALKKE E+K +L + + K + S G+
Sbjct: 21 AAAAADIDLLQKIEALKKELAELKAQLKDLQKRVDKTEKKSA----------------GD 64
Query: 374 NDSWGGD 380
++GGD
Sbjct: 65 RLTFGGD 71
Score = 32.9 bits (75), Expect = 1.7
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 1581 SSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLE 1640
S A +A + Q++EAL ++ L Q + LQ+++ + E +++ L +
Sbjct: 17 SLPAAAAAADIDLLQKIEALKKELAELKAQLKDLQKRVDKTEK-----KSAGDRLTFGGD 71
Query: 1641 -QFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLIST-LQHQL-QEARESLSAAGRLS 1696
+F+ + N +L L G + + L + L + +A + LS GRLS
Sbjct: 72 FRFRVDSLNYKTAALGQLMGFNPMVPGQKYKNDALYTNRLGLNMKAKATDDLSFKGRLS 130
>gnl|CDD|227612 COG5293, COG5293, Predicted ATPase [General function prediction
only].
Length = 591
Score = 33.3 bits (76), Expect = 1.3
Identities = 39/233 (16%), Positives = 89/233 (38%), Gaps = 28/233 (12%)
Query: 599 QENIELKKKLEQAVEKQKG-----LEEEIQQLEEDTSILREQLESKDQVDDSIEK----- 648
+ +E KKKL + + K LEE + ++ + + D +
Sbjct: 202 IQELESKKKLAELLRKTWIGSLDSLEEIETTELRKQDEVNKKQATLNTFDFHAQDYAETE 261
Query: 649 ----TLRNEIQELHAKLINVEALVNQAQVEKQALDGKY-EELKEKYEQMSEKFENQTGKD 703
T+ I EL+ + I++++ + + + +E++ YE++ F Q KD
Sbjct: 262 ELVNTVDERIAELNNRRISMQSHWKRVKTSLKEQILFCPDEIQVLYEEVGVLFPGQVKKD 321
Query: 704 SVDIDTLIKNLQSKKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSK 763
+ + + ++ + + + I+ + + + +LD+L + + ++++
Sbjct: 322 FEHVIAFNRAITEERHDYL-----QEEIAEIEGDLKEVNAELDDL-GKRRAEGLAFLKNR 375
Query: 764 NDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAF------LQRSILDLER 810
E K L E+ +L RI + +A L+ LDLE
Sbjct: 376 GVFE-KYQTLCEEIIALRGELAELEYRIEPLRKLHALDQYIGTLKHECLDLEE 427
>gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding
[General function prediction only].
Length = 239
Score = 32.7 bits (75), Expect = 1.4
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 237 ELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVET 296
++KL +EK L I+ + K +A+L + + EA + + V +L+S+++
Sbjct: 11 AIQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQE 70
Query: 297 LEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKLAKQESTLAKLKTHSES 356
+ +K+ E++L D E+++ AL E + KE++ E LA+L E
Sbjct: 71 IRERIKRAEEKLSAVKD---------ERELRALNIEIQIAKERINSLEDELAELMEEIEK 121
Query: 357 LQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKK 415
L+K++ + + LE N + + A L++E + E+ EL ++ ++E L +
Sbjct: 122 LEKEIEDLKERLERLEKNLA-----EAEARLEEEVAEIREEGQELSSKREELKEKLDPE 175
Score = 32.3 bits (74), Expect = 2.1
Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 32/194 (16%)
Query: 653 EIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIK 712
IQ+L + +E + + + + + E L + E + + E D++ +
Sbjct: 11 AIQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELE--------DLENQVS 62
Query: 713 NLQSK-KEELCRLLDEKNTLDNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKIS 771
L+S+ +E R+ + L +K E+E +I + N LE +++
Sbjct: 63 QLESEIQEIRERIKRAEEKLSAVKDEREL---------RALNIEIQIAKERINSLEDELA 113
Query: 772 ELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKLKEFNEKEISYNENIE 831
EL EI DL +R+ LE+NL E E+ E +
Sbjct: 114 ELMEEIEKLEKEIEDLKERL--------------ERLEKNLAEAEARLEEEVAEIREEGQ 159
Query: 832 ASNHKIQQLTQETD 845
+ K ++L ++ D
Sbjct: 160 ELSSKREELKEKLD 173
Score = 31.6 bits (72), Expect = 3.0
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 88 FELMPNVEDYNEKIRALNEEVSQLKTKENELHSRIEELEDK---LQQKIDDEKSVSYQLE 144
L P +++ + ++ E+ L L +E+LE++ L+ +I + + + E
Sbjct: 20 DRLEPRIKEIRKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQEIRERIKRAE 79
Query: 145 EKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAE 204
EK + E L E+Q K+++ L E +A+ E IEKL+ E
Sbjct: 80 EKLSAVKDERELRA-LNIEIQIAKERINSL-------------EDELAELMEEIEKLEKE 125
Query: 205 LESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEA 264
+E +++ L E + E A ++EE+ ++ ++E E+ E L KL+
Sbjct: 126 IEDLKERLERLEKNLAE--------AEARLEEEVAEI---REEGQELSSKREELKEKLDP 174
Query: 265 DL 266
+L
Sbjct: 175 EL 176
Score = 30.4 bits (69), Expect = 8.3
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 326 IEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDKLA 385
I+ L E + ++ ++ + L K K E+L K L E+ELE+
Sbjct: 12 IQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELED--------------- 56
Query: 386 TLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRAKCSE 445
L+ + L ++ E++ ++ EE L +++ E + +N+L + +E
Sbjct: 57 -LENQVSQLESEIQEIRERIKRAEEKLSAVKDERELRALNIEIQIAKE-RINSLEDELAE 114
Query: 446 FEKTIVELKSQEELLKQALIDKENELSE 473
+ I +L+ + E LK+ L E L+E
Sbjct: 115 LMEEIEKLEKEIEDLKERLERLEKNLAE 142
>gnl|CDD|223450 COG0373, HemA, Glutamyl-tRNA reductase [Coenzyme metabolism].
Length = 414
Score = 33.4 bits (77), Expect = 1.4
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 133 IDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIA 192
IDD + + + E E + + ++EE+ + L+ L+ V I+ E A
Sbjct: 294 IDDLEEIVEENLEARKEEAA--KAEAIIEEELAEFMEWLKKLE---VVPTIRALREQAED 348
Query: 193 KKDEVIEKLKAELESVEKA 211
++E +EK +L + E
Sbjct: 349 VREEELEKALKKLPNGEDE 367
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional.
Length = 746
Score = 33.5 bits (77), Expect = 1.4
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 702 KDSVDIDTLIKNLQSKKEELC-------RLLDEKNTLDNIKVEKENLEIQLDNLNTNYQD 754
K S+D+ I N ++K E LC LL+ KN L ++K L I LD L + +
Sbjct: 163 KFSIDVIVDILN-ETKLEWLCLDLDLVEGLLERKNELPHLK----KLII-LDTLIKSKEI 216
Query: 755 KINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDE 814
IN ++ NN + K N++++ + ISL + L+ ++L E
Sbjct: 217 NINKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLE---YDKEKLEKIKDLKE 273
Query: 815 KLKEFNEKEISYNE--NIEASNHKIQQ 839
K K+ I +++ + +N+KIQ
Sbjct: 274 KAKKLGISIILFDDMTKNKTTNYKIQN 300
>gnl|CDD|216665 pfam01725, Ham1p_like, Ham1 family. This family consists of the
HAM1 protein and hypothetical archaeal bacterial and C.
elegans proteins. HAM1 controls 6-N-hydroxylaminopurine
(HAP) sensitivity and mutagenesis in S. cerevisiae
inosine triphosphate pyrophosphatase. The HAM1 protein
protects the cell from HAP, either on the level of
deoxynucleoside triphosphate or the DNA level by a yet
unidentified set of reactions.
Length = 181
Score = 32.1 bits (74), Expect = 1.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 955 NKNKMAELSAMLESVQAENISIKQMNEELQALTETLKQ 992
NK K+ E+ A+L + E I +K E++ +T ++
Sbjct: 7 NKGKLKEIKAILGDLGIEVIDLKHFPIEVEETGDTFEE 44
>gnl|CDD|235899 PRK06975, PRK06975, bifunctional uroporphyrinogen-III
synthetase/uroporphyrin-III C-methyltransferase;
Reviewed.
Length = 656
Score = 33.2 bits (76), Expect = 1.4
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 1001 RKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKV 1060
++ E QR Q DA E+ KT Q V +L + ++ +L +S
Sbjct: 349 DRLDQELVQRQQANDA-QTAELRVKTEQAQA---SVHQLDSQFAQ---LDGKLADAQSAQ 401
Query: 1061 YELEQIQARLEAERTQW-IHEFEVKTNTLSDLQTQLDTYNAKITHAAL 1107
LEQ L R W I E E + + + Q QL T N ++ AL
Sbjct: 402 QALEQQYQDLSRNRDDWMIAEVE-QMLSSASQQLQL-TGNVQLALIAL 447
>gnl|CDD|218967 pfam06273, eIF-4B, Plant specific eukaryotic initiation factor 4B.
This family consists of several plant specific
eukaryotic initiation factor 4B proteins.
Length = 496
Score = 33.1 bits (75), Expect = 1.6
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 126 EDKLQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKK 185
E L++K D + + +LE + ++ + TE + L+EE+ L+ L+ +E + E
Sbjct: 339 EVVLEEKGKDWRKIDLELEHRRVDRPE-TEEEKNLKEEINLLRVDLK-KEEAIAPESKGS 396
Query: 186 ANESAIAKKDEVIEKLKAELESVEKALREK 215
E + E+I + + ELE + L +K
Sbjct: 397 GQEQSHKGLSELIRQKEKELERLTVELDDK 426
>gnl|CDD|234342 TIGR03752, conj_TIGR03752, integrating conjugative element protein,
PFL_4705 family. Members of this protein family are
found occasionally on plasmids such as the Pseudomonas
putida toluene catabolic TOL plasmid pWWO_p085. Usually,
however, they are found on the bacterial main chromosome
in regions flanked by markers of conjugative transfer
and/or transposition [Mobile and extrachromosomal element
functions, Plasmid functions].
Length = 472
Score = 33.1 bits (76), Expect = 1.7
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 960 AELSAM---LESVQAENISIKQMNEELQALTETLKQTSNTHEEDRKILDEYKQRVQELDA 1016
AE+ + L + +EN ++K NE LQ K+ + ++ ++ + Q + +
Sbjct: 66 AEVKELRKRLAKLISENEALKAENERLQ------KREQSIDQQIQQAVQSETQELTKEIE 119
Query: 1017 KLAEEIASKTSIIQTLEIQVKELQDKL 1043
+L E Q L+ + +LQ +L
Sbjct: 120 QLKSER-------QQLQGLIDQLQRRL 139
Score = 32.7 bits (75), Expect = 2.2
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 1589 ASVRS-NQQVEALTSQVKSLTEQKEKLQEKL----YQAEDVVQKHQASLTNLQIVLEQFQ 1643
A V+ +++ L S+ ++L + E+LQ++ Q + VQ LT L+ +
Sbjct: 66 AEVKELRKRLAKLISENEALKAENERLQKREQSIDQQIQQAVQSETQELTKEIEQLKSER 125
Query: 1644 AEKDNEIAQSLEFLQGELNNSYAKNNEL 1671
+ I Q L G L ++L
Sbjct: 126 QQLQGLIDQLQRRLAGVLTGPSGGGSDL 153
Score = 31.5 bits (72), Expect = 4.5
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 533 QVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQ--LTAEKERL 590
+V++ R+ L ENE L+ EN +Q+ S+D Q + +E + L
Sbjct: 67 EVKELRKRLAKLISENEALKA---------ENERLQK---REQSIDQQIQQAVQSETQEL 114
Query: 591 DEEVTVLSQENIELKKKLEQAVEKQKGL 618
+E+ L E +L+ ++Q + G+
Sbjct: 115 TKEIEQLKSERQQLQGLIDQLQRRLAGV 142
Score = 31.2 bits (71), Expect = 5.9
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 578 DNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQ-LEEDTSILREQL 636
D L AE + L + + L EN LK + E+ ++++ ++++IQQ ++ +T L +++
Sbjct: 59 DTLRTLVAEVKELRKRLAKLISENEALKAENERLQKREQSIDQQIQQAVQSETQELTKEI 118
Query: 637 ESKDQVDDSIEKTLRNEIQELHAKLINV 664
E Q+ ++ + I +L +L V
Sbjct: 119 E---QLKSERQQL-QGLIDQLQRRLAGV 142
Score = 31.2 bits (71), Expect = 6.2
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Query: 1498 PVETSR----ERNELALRLQNLQEEKTMLLTEINDLR-LNQNTLYNENERL---KQHLLK 1549
P +T R E EL RL L E L E L+ Q+ + + Q L K
Sbjct: 57 PADTLRTLVAEVKELRKRLAKLISENEALKAENERLQKREQSIDQQIQQAVQSETQELTK 116
Query: 1550 TEEDNTSELVKAEQTIQDLHVKL 1572
E SE + + I L +L
Sbjct: 117 EIEQLKSERQQLQGLIDQLQRRL 139
Score = 30.8 bits (70), Expect = 8.3
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 149 EISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESV 208
+++L N L+ E + L+ + + +D+ I++A +S + + IE+LK+E + +
Sbjct: 74 RLAKLISENEALKAENERLQKREQSIDQQ-----IQQAVQSETQELTKEIEQLKSERQQL 128
Query: 209 EKALREKESEVEEWGNNDAWGASD 232
+ + + + + + G SD
Sbjct: 129 QGLIDQLQRRLAGVLTGPSGGGSD 152
>gnl|CDD|215512 PLN02950, PLN02950, 4-alpha-glucanotransferase.
Length = 909
Score = 33.2 bits (76), Expect = 1.9
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 27/131 (20%)
Query: 160 LQEEMQSLKDKL--RDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKES 217
L+ E+Q + +L +D+D T+ A + +IAKK +EK L S + ++ S
Sbjct: 346 LKAEIQKARKQLDKKDVDYEATL-----ATKLSIAKKVFDLEK-DLTLNS--SSFKKFFS 397
Query: 218 EVEEW--------------GNND--AWGA-SDDVKEELEKLVVEKQELIEVIQNHETLIA 260
E E W +D WG SD E+LEKLV + I H +
Sbjct: 398 ENEHWLKPYAAFCFLRDFFETSDHSQWGRFSDFSDEKLEKLVSPGSLHYDTICFHYYIQY 457
Query: 261 KLEADLTRVKE 271
L + L+ E
Sbjct: 458 HLHSQLSEAAE 468
>gnl|CDD|237256 PRK12901, secA, preprotein translocase subunit SecA; Reviewed.
Length = 1112
Score = 33.1 bits (76), Expect = 2.0
Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 606 KKLEQAVEKQKGLEEEIQQLEEDTSILREQLES-KDQVDDSIEKTLRNEIQELHAKLINV 664
K+++ VEK K E++ L D LR + + K + +++ + +I+EL A+ I
Sbjct: 18 KEIQPIVEKIKAEYPELEALSNDE--LRAKTDEFKQYIKEAV-ADIDAKIEELKAEAIES 74
Query: 665 EALVNQAQVEKQALDGKYEELKEKYEQMSEK 695
+ E++ + + ++L+++ ++ EK
Sbjct: 75 LDI-----DEREDIYAQIDKLEKEAYEILEK 100
>gnl|CDD|198139 smart01071, CDC37_N, Cdc37 N terminal kinase binding. Cdc37 is a
molecular chaperone required for the activity of
numerous eukaryotic protein kinases. This domain
corresponds to the N terminal domain which binds
predominantly to protein kinases.and is found N terminal
to the Hsp (Heat shocked protein) 90-binding domain.
Expression of a construct consisting of only the
N-terminal domain of Saccharomyces pombe Cdc37 results
in cellular viability. This indicates that interactions
with the cochaperone Hsp90 may not be essential for
Cdc37 function.
Length = 154
Score = 31.6 bits (72), Expect = 2.0
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 270 KEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEAL 329
+ E+ E+ + M L +++ L L+++E E T N E E
Sbjct: 41 RVERMEEIKNLKYELIMNDHLNKRIDKLLKGLREEELSPETPTYN--------EMLAELQ 92
Query: 330 KKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEW 371
+ +E++E E L +LK H + L+K+ E +L+E
Sbjct: 93 DQLKKELEEANGDSEGLLEELKKHRDKLKKEQKELRKKLDEL 134
>gnl|CDD|221757 pfam12761, End3, Actin cytoskeleton-regulatory complex protein
END3. Endocytosis is accomplished through the
sequential recruitment at endocytic sites of proteins
that drive cargo sorting, membrane invagination and
vesicle release. End3p is part of the coat module
protein complex Pan1, along with Pan1p, Sla1p, and
Sla2p. The proteins in this complex are regulated by
phosphorylation events. End3p also regulates the
cortical actin cytoskeleton. The subunits of the Pan1
complex are homologous to mammalian intersectin.
Length = 193
Score = 32.0 bits (73), Expect = 2.2
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 20/121 (16%)
Query: 189 SAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNNDAWGASDDVKEELEKLVVEKQEL 248
SA D +L+ EL +E L + + E E NDA S VK ELE+L+ K+
Sbjct: 89 SATQGTDWEEVRLRRELAELESKLSKAQQESE--SRNDAKPNSALVKRELEQLLKYKENQ 146
Query: 249 IEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQEL 308
+ + + +L V+E+ + ++ +V LE L +++EL
Sbjct: 147 LRELGGR----SSNGVNLGSVRED--------------IDSIEEQVTGLEEHLASRKEEL 188
Query: 309 E 309
Sbjct: 189 A 189
Score = 30.4 bits (69), Expect = 6.2
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 260 AKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWG- 318
A+LE+ L++ ++E E+ K A+VK LE LK KE +L + G
Sbjct: 106 AELESKLSKAQQESESRNDAK-PNSALVKR------ELEQLLKYKENQLRELGGRSSNGV 158
Query: 319 -SSGNEQDIEALKKENEEIKEKLAKQESTLAKLK 351
+DI++++++ ++E LA ++ LA+LK
Sbjct: 159 NLGSVREDIDSIEEQVTGLEEHLASRKEELAQLK 192
>gnl|CDD|181619 PRK09039, PRK09039, hypothetical protein; Validated.
Length = 343
Score = 32.2 bits (74), Expect = 2.3
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 1660 ELNNSYAKNNELTQLIS-------TLQHQLQEARESLSAA----GRLSDQLNQKSQTIQE 1708
L+ ++ EL L+S LQ + R SLSAA RL L + +
Sbjct: 54 ALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAA 113
Query: 1709 LTEKVNQLMEELNKKEA 1725
+ +L +EL+ ++
Sbjct: 114 AEGRAGELAQELDSEKQ 130
Score = 31.9 bits (73), Expect = 3.0
Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 1491 VVAQHVAPVETS---RERNELALRLQNL-------QEEKTMLLTEINDLRLNQNTLYNEN 1540
VVAQ E S + L ++ L ++ L + +LR + + E
Sbjct: 38 VVAQFFLSREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAER 97
Query: 1541 ERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEAL 1600
RL Q LL + AE +L +L ++ S R+ QVE L
Sbjct: 98 SRL-QALLAELAGAGAA---AEGRAGELAQELDSEKQ-----------VSARALAQVELL 142
Query: 1601 TSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQ 1652
Q+ +L Q L+ L +E ++ QA + +L L A++ E+ +
Sbjct: 143 NQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQRVQELNR 194
>gnl|CDD|130078 TIGR01005, eps_transp_fam, exopolysaccharide transport protein
family. The model describes the exopolysaccharide
transport protein family in bacteria. The transport
protein is part of a large genetic locus which is
associated with exopolysaccharide (EPS) biosynthesis.
Detailed molecular characterization and gene fusion
analysis revealed atleast seven gene products are
involved in the overall regulation, which among other
things, include exopolysaccharide biosynthesis, property
of conferring virulence and exopolysaccharide export
[Transport and binding proteins, Carbohydrates, organic
alcohols, and acids].
Length = 754
Score = 32.7 bits (74), Expect = 2.3
Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 17/218 (7%)
Query: 1427 LGGQVATLEKQLKTTSETLATKERQLAET-KEQLSLAQSQLEEVTQLMSSNDRPEADGEP 1485
L ++A L KQ + +A Q +LA QL E+ +S R A+
Sbjct: 199 LAPEIADLSKQSRDAEAEVAAYRAQSDLLMGNNATLATQQLAELNTELS---RARANRAA 255
Query: 1486 AQEREVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQ 1545
A E A V + ++ + + Q + L I LR E
Sbjct: 256 A---EGTADSVKKALQNGGSLDVLPEVLSSQLK---LEDLIQRLRER----QAELRATIA 305
Query: 1546 HLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVK 1605
L T N +V A+ ++ DL ++R +++ S + + + L S V
Sbjct: 306 DLSTTMLANHPRVVAAKSSLADLDAQIRSELQKITKS---LLMQADAAQARESQLVSDVN 362
Query: 1606 SLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQ 1643
L + E+ + + + A + L ++
Sbjct: 363 QLKAASAQAGEQQVDLDALQRDAAAKRQLYESYLTNYR 400
Score = 31.9 bits (72), Expect = 4.1
Identities = 20/112 (17%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 809 ERNLDEKLKEFNEKEISYNENIEASNHKI-QQLTQETDTLKAEL-VAQAESTQLVKQEQA 866
+L + + + ++ ++ + +I +L + T +L + AQA +QLV
Sbjct: 304 IADLSTTMLANHPRVVAAKSSLADLDAQIRSELQKITKSLLMQADAAQARESQLVSDVNQ 363
Query: 867 LLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEI-NAKV 917
L AA+ ++ L+++ + +Q + N + ++++Y +A+V
Sbjct: 364 LKAASAQAGEQQVDLDALQRDAAAKRQLYESYLTNYRQAASRQNYVPVDARV 415
>gnl|CDD|227061 COG4717, COG4717, Uncharacterized conserved protein [Function
unknown].
Length = 984
Score = 32.5 bits (74), Expect = 2.4
Identities = 85/538 (15%), Positives = 171/538 (31%), Gaps = 79/538 (14%)
Query: 1222 TTGAPDLNASIENILKEKDA---------TLSEMLKKSEAKDKTLQEMQAALEKHLSEKY 1272
T+G+P +E + KE D+ ++++L+K + + + E + + K
Sbjct: 153 TSGSPASTKLLEVLNKEADSLYKPSGRNPQINQLLEKLKQERNEIDEAEKEYATY--HKL 210
Query: 1273 QFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDSKDSVRYSDEEHVQELRELQL 1332
+ A R +L +L+ I+ L + +QE ++L+
Sbjct: 211 LESRRAEHARLAELRSELRADRDHIRALRDA--------------VELWPRLQEWKQLE- 255
Query: 1333 MNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQL 1392
Q R ++ + LE+ L Q++ + L LAE + L QL
Sbjct: 256 -----QELTRRREELATFPRDGVLRLEKREAHL---QKTEAEIDALLVRLAELKDLASQL 307
Query: 1393 VQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLA------ 1446
+ Q ++RL+ LSE +L +A +E L+ E
Sbjct: 308 IPAKEAVL-------QALVRLHQQLSEIKASAFELTETLAGIEADLRDKEEAAGNGFEAE 360
Query: 1447 --TKERQLAETKEQLSLAQSQLEEVTQLMSSNDR------PEADGEPAQEREVVAQHVAP 1498
R L S + + D + + + + A
Sbjct: 361 RVHDLRSLECMLRYQSSQRELKQTEAAYCKRLDEKRLFEDEAEEEARQRLADDEEEVRAG 420
Query: 1499 VETSRERNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSEL 1558
E E+ ++ + EE L + Q L + ++ + + L
Sbjct: 421 DEAREEKIAANSQVIDK-EEVCNLYDRRDTAWQKQRFLREKQTAFERQKTEHTKIIALRL 479
Query: 1559 VKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVK------SLTEQKE 1612
+ + + + SA ++S+ +
Sbjct: 480 AGMLLVALSRLLTSLIFQIIFAVAQIVFLSAEIKSSSRAVREEKAAVTDIPEELARLLIT 539
Query: 1613 KLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELT 1672
+L V + + L+ L+Q +A + E L+G + A E
Sbjct: 540 DELPELAVDLLVQSRIRQHWQQLRKALDQLEA--------AYEALEGRFAAAEAAMAEW- 590
Query: 1673 QLISTLQHQLQEARESLSAAGRLSDQLNQKS-QTIQELTEKVNQLMEELNKKEAKLKE 1729
Q + +EA + L + LS + T+++L + Q EL + A+L+E
Sbjct: 591 ------QSEWEEALDELGLSRELSPEQQLDILSTMKDLKKL-MQKKAELTHQVARLRE 641
Score = 32.5 bits (74), Expect = 2.6
Identities = 58/329 (17%), Positives = 126/329 (38%), Gaps = 51/329 (15%)
Query: 98 NEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTEHN 157
N+ + L +E +++ E E + ++ ++ +L E E+ +H
Sbjct: 184 NQLLEKLKQERNEIDEAEKE--------YATYHKLLESRRAEHARLAELRSELRADRDHI 235
Query: 158 RFLQEEMQSLKDKLRDLDENVTVED--IKKANESAIAKKDEVIEKLKAELESVEKALREK 215
R ++ + L E +E ++ E A +D V+ LE E L++
Sbjct: 236 R----ALRDAVELWPRLQEWKQLEQELTRRREELATFPRDGVL-----RLEKREAHLQKT 286
Query: 216 ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELI---EVIQNHETLIAKLEADLTRVKEE 272
E+E++ A ++K+ +L+ K+ ++ + + I +LT
Sbjct: 287 EAEIDALLVRLA-----ELKDLASQLIPAKEAVLQALVRLHQQLSEIKASAFELTETLAG 341
Query: 273 KEAEVSGKLEQ--DAMVKELKSKVETLEASLKQK------EQELEGWTDN-DNWGSSGNE 323
EA++ K E + E + +LE L+ + +Q + D +E
Sbjct: 342 IEADLRDKEEAAGNGFEAERVHDLRSLECMLRYQSSQRELKQTEAAYCKRLDEKRLFEDE 401
Query: 324 QDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDNDK 383
+ EA ++ ++ +E A E+ K+ +S Q+++KE + D+
Sbjct: 402 AEEEARQRLADDEEEVRAGDEAREEKIAANS-----QVIDKEEVCNLY----------DR 446
Query: 384 LATLQQENKVLNEKVSELQTQLLSVEEAL 412
T Q+ + L EK + + Q + +
Sbjct: 447 RDTAWQKQRFLREKQTAFERQKTEHTKII 475
Score = 30.6 bits (69), Expect = 9.4
Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 18/239 (7%)
Query: 1068 ARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALVEQELGEMKNQMQTLEYEKQ 1127
+L + Q +E + + L++ A+ A + EL ++ ++ L
Sbjct: 184 NQLLEKLKQERNEIDEAEKEYATYHKLLESRRAEHARLAELRSELRADRDHIRALRDA-V 242
Query: 1128 ELLKQIQE----ESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLMETKLTLEAQLK 1183
EL ++QE E + + +D ++ A L + + + L A+LK
Sbjct: 243 ELWPRLQEWKQLEQELTRRREELATFPRDGVLRLEKREAHLQKTEAEIDALLVRL-AELK 301
Query: 1184 ELADNETQYKQMQIVYEDTQRKLNEELARRDAT------IATLNTTGAPDLNASIENIL- 1236
+LA K+ + +L+++L+ A+ D + N
Sbjct: 302 DLASQLIPAKEAVL---QALVRLHQQLSEIKASAFELTETLAGIEADLRDKEEAAGNGFE 358
Query: 1237 --KEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEALELRTEDLEYKLQEK 1293
+ D E + + ++ + L++ +AA K L EK FE EA E + L +E
Sbjct: 359 AERVHDLRSLECMLRYQSSQRELKQTEAAYCKRLDEKRLFEDEAEEEARQRLADDEEEV 417
>gnl|CDD|214661 smart00435, TOPEUc, DNA Topoisomerase I (eukaryota). DNA
Topoisomerase I (eukaryota), DNA topoisomerase V,
Vaccina virus topoisomerase, Variola virus
topoisomerase, Shope fibroma virus topoisomeras.
Length = 391
Score = 32.3 bits (74), Expect = 2.5
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 93 NVEDYNEKIRALNEEVSQLKT----------KENELHSRIEELEDKLQQKIDDEKSVSYQ 142
++E EKI+AL ++ +LK + +L S+ E +KL ++ ++K +
Sbjct: 278 SMEKLQEKIKALKYQLKRLKKMILLFEMISDLKRKLKSKFERDNEKLDAEVKEKKKEKKK 337
Query: 143 LEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTV 180
E+K +I + L+E ++ L+ + D +EN TV
Sbjct: 338 EEKKKKQIER-------LEERIEKLEVQATDKEENKTV 368
>gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional.
Length = 1388
Score = 32.3 bits (74), Expect = 2.9
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 49/220 (22%)
Query: 160 LQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKL-KAELESVEKALREKESE 218
L+ E+ L +K+R + V ++ N AKK +++++L K + +++K +
Sbjct: 1004 LERELARLSNKVRFIKH-VINGELVITN----AKKKDLVKELKKLGYVRFKDIIKKKSEK 1058
Query: 219 VEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVS 278
+ A + E+ E+ + ++ L++ LT
Sbjct: 1059 ITAEEEEGAEEDDEADDEDDEEELGAAVS-------YDYLLSMPIWSLT----------- 1100
Query: 279 GKLEQDAMVKELKSKVETLEASLKQKEQELEGW---TDNDNWGSSGNEQDIEALKK---- 331
K KVE L A L++KE+ELE T D W +D++ ++
Sbjct: 1101 ------------KEKVEKLNAELEKKEKELEKLKNTTPKDMW-----LEDLDKFEEALEE 1143
Query: 332 -ENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEE 370
E E KE +Q S+ + +L +KE + ++
Sbjct: 1144 QEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKK 1183
>gnl|CDD|219916 pfam08580, KAR9, Yeast cortical protein KAR9. The KAR9 protein in
Saccharomyces cerevisiae is a cytoskeletal protein
required for karyogamy, correct positioning of the
mitotic spindle and for orientation of cytoplasmic
microtubules. KAR9 localises at the shmoo tip in mating
cells and at the tip of the growing bud in anaphase.
Length = 626
Score = 32.1 bits (73), Expect = 2.9
Identities = 68/394 (17%), Positives = 129/394 (32%), Gaps = 63/394 (15%)
Query: 1490 EVVAQHVAPVETSRERNELALRLQNLQEEKTMLLTEI----NDLRLNQNTLYNENERLKQ 1545
E+V + E ++ L +L EE + L +I L+ +T NE
Sbjct: 71 ELVEAYAGGNEDDSLNEDIHNSLFDLIEEVSDLELDIKPWLIALKKLVDTAIEFNEIWND 130
Query: 1546 HLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSAS--------VRSNQQV 1597
+ E+ + +L E+R S + ++S+
Sbjct: 131 VM----GSLDEEIEQNISLCFELQ------EKRFASPVRHGLPSFTLEQIVKELKSSTNF 180
Query: 1598 EALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQA------------- 1644
+ ++ + Q + + E + E +Q + SL L ++QF +
Sbjct: 181 SNKSLRLPTFNPQDKSIYEDYLELEARIQPLRVSLDFLPERIDQFNSRCETNFPTLSEEL 240
Query: 1645 -EKDNEIAQSLEFLQGELNNSYAKNNE-------LTQLISTLQHQLQEARESLSAAG--- 1693
+K + + E LQ EL S K T L LQ L SL
Sbjct: 241 NKKYENLEKKYENLQSEL-RSLKKELIDKRWNLLFTNLNHELQKMLDSVERSLQKLQNNK 299
Query: 1694 ----------RLSDQLNQKSQTIQELTEKVNQLMEELNKKEAKLKEVNNGGKVDKCLVTN 1743
++DQ+ KS+TI + T + E + + + N K L
Sbjct: 300 TTGMHLDNRTTMTDQIESKSKTISK-TFTLIYKALEESILDKGVASRTNRELAPKWLSLK 358
Query: 1744 MIVNFLTAPSRPSRHQALQILASVIDMTPQDRQKIGLEPSQAFNPNQSLSEAFIQFLESE 1803
+V+ + S+ S+ Q ++ SV + PS + + S + +S
Sbjct: 359 TVVDHVLRDSQSSKIQQIRDSISVSGSDYSNPGSSIDTPSSSPS-----SSVIMTPPDSG 413
Query: 1804 SSPRSKAQSSTPVSRRTSSTTSPLLFPESALPSL 1837
++ ++ + LL + P+L
Sbjct: 414 PGSNVSSRRVGTPGSKSDRVGAVLLRRMNIKPTL 447
>gnl|CDD|225087 COG2176, PolC, DNA polymerase III, alpha subunit (gram-positive
type) [DNA replication, recombination, and repair].
Length = 1444
Score = 32.3 bits (74), Expect = 3.0
Identities = 53/281 (18%), Positives = 102/281 (36%), Gaps = 37/281 (13%)
Query: 54 YDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVEDYNEKIRALNEEVSQLKT 113
+ L ++F+++V + + D + T ++ F+ + +E + K +++LK
Sbjct: 64 ENALSEEFEQLVAKVEFDIEVRNVDITEQEIQTYFKKI--IEQLSVKSPIFKSLLNKLKL 121
Query: 114 KENELHSRIEELEDKLQQKIDDEKS--VSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKL 171
K + IE++ + + KS + +L+ + + EE + K
Sbjct: 122 KVKGNNILIEQVLNNPEFDHFKNKSPELQKKLQSFGFPQLLIEFEVNDISEEQEFEK--- 178
Query: 172 RDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKA--------LREKESEVEEWG 223
E I + E A + E +KLKAE VEK R+ +S E
Sbjct: 179 -------FEEAINEEVEKAAQEALEAEKKLKAESPKVEKPKPLFDGQKGRKIKSTEEIKP 231
Query: 224 NNDAWGASDDVKEELEKLVVEKQEL--------IEVIQNHETLIAK-------LEADLTR 268
VK E +E +EL I+V +LI K E
Sbjct: 232 LIKINEEETRVKVEGYIFKIEIKELKSGRTLLNIKVTDYTSSLILKKFLRDEEDEKKFDG 291
Query: 269 VKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELE 309
+K+ + G ++ D ++L + + K ++L
Sbjct: 292 IKKGMWVKARGNVQLDTFTRDLTMIINDINEIENAKRKDLA 332
>gnl|CDD|215590 PLN03123, PLN03123, poly [ADP-ribose] polymerase; Provisional.
Length = 981
Score = 32.5 bits (74), Expect = 3.0
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 297 LEASLKQKEQELEGWTDNDNWGSSGNEQDIEALKKENEEIKEKL----AKQESTLAKLKT 352
LE S ++L GW D S E + +KK E KE+ ++ AK K
Sbjct: 154 LEMSPSTPVEKLSGW---DTLSDSDQEAVLPLVKKSPSEAKEEKAEERKQESKKGAKRKK 210
Query: 353 HSESLQKQLLEKEMELEEWGNNDSWGGDNDKLATLQQENKVLNEKVSELQTQLLSVE 409
+ K K S +D + L+ ++K L +L+ + + E
Sbjct: 211 DASGDDKSKKAKTDRDVSTSTAASQKKSSDLESKLEAQSKELWSLKDDLKKHVSTAE 267
>gnl|CDD|234173 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members
of this protein family are the bacterial ATP-dependent
chaperone ClpB. This protein belongs to the AAA family,
ATPases associated with various cellular activities
(pfam00004). This molecular chaperone does not act as a
protease, but rather serves to disaggregate misfolded
and aggregated proteins [Protein fate, Protein folding
and stabilization].
Length = 852
Score = 32.2 bits (74), Expect = 3.1
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 36/169 (21%)
Query: 142 QLEEKAIEI-----SQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDE 196
L +KAI++ +++ EE+ L ++ L + E +KK + A ++ E
Sbjct: 380 FLPDKAIDLIDEAAARIRMEIDSKPEELDELDRRIIQL--EIEREALKKEKDEASKERLE 437
Query: 197 VIEKLKAELESVEKALREK-ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIEVIQNH 255
+EK AELE L E+ ++E A +KEE+E++ +E ++
Sbjct: 438 DLEKELAELEEEYADLEEQWKAEKA------AIQGIQQIKEEIEQVRLELEQ-------- 483
Query: 256 ETLIAKLEADLTRVKE---------EKE-AEVSGKLEQDAMVKELKSKV 294
A+ E DL + E EK KL ++ + L+ +V
Sbjct: 484 ----AEREGDLAKAAELQYGKLPELEKRLQAAEAKLGEETKPRLLREEV 528
Score = 31.5 bits (72), Expect = 5.8
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 585 AEKERLDEEVTVLSQENIELKKKLEQAVEKQ-KGLEEEIQQLEEDTSILREQLESKDQVD 643
E + LD + L E LKK+ ++A +++ + LE+E+ +LEE+ + L EQ ++
Sbjct: 405 EELDELDRRIIQLEIEREALKKEKDEASKERLEDLEKELAELEEEYADLEEQWKA----- 459
Query: 644 DSIEKTLRNEIQELHAKLINVEALVNQAQVE---KQALDGKYEEL--KEKYEQMSEKFEN 698
EK IQ++ ++ V + QA+ E +A + +Y +L EK Q +E
Sbjct: 460 ---EKAAIQGIQQIKEEIEQVRLELEQAEREGDLAKAAELQYGKLPELEKRLQAAEAKLG 516
Query: 699 QTGKDSV--------DIDTLI---------KNLQSKKEELCRLLDE 727
+ K + +I ++ K L+ ++E+L + +
Sbjct: 517 EETKPRLLREEVTAEEIAEVVSRWTGIPVSKMLEGEREKLLHMEEV 562
>gnl|CDD|223716 COG0643, CheA, Chemotaxis protein histidine kinase and related
kinases [Cell motility and secretion / Signal
transduction mechanisms].
Length = 716
Score = 32.3 bits (74), Expect = 3.1
Identities = 49/278 (17%), Positives = 91/278 (32%), Gaps = 19/278 (6%)
Query: 1208 EELARRDATIATLN-----TTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQA 1262
E+ A +A L GA D + E E
Sbjct: 114 EDDADLLDLLAQLAAGEGLEPGAADAEEAEEEAAVEPALAALNEELSEGLVPALELPEAE 173
Query: 1263 ALEKHLSEKYQFEKEALELRTEDLEYKLQEKEKMIQELNEMKQSFFIGDS---KDSVRYS 1319
A E ED K +++EL E+ + +
Sbjct: 174 AAAAAAPELEAPPYAIDVALEEDAPLKSARAALLLEELEELGEEIAATLPDLEDLEAEAA 233
Query: 1320 DEEHVQELRELQLMNESLQNEVLRSATEIDNMKETITYLEQYNLQLSKSQESSTTLTLLQ 1379
EE L Q E L +VL E + ++ L+ L+L++S++++ + Q
Sbjct: 234 FEESEVVLATEQD--EELIRDVLELVVEAEELEIAAVELDAELLELAESEQAADDVLAAQ 291
Query: 1380 SELAEQRTLNQQLVQIVNT-----KHTESNNYHQEILRLNGILSEELPKLKDLGGQVATL 1434
+E +++ + K + +R++ E+L +L +L G++
Sbjct: 292 AEPLAEKSAAEAAKLSALEAAPAAKAAAAAAGASSSIRVD---VEKLDRLMNLVGELVIT 348
Query: 1435 EKQLKTTSETLATKERQLAETKEQLSLAQSQL-EEVTQ 1471
+L + L +L E QLS + L +EV +
Sbjct: 349 RSRLSQLASELDEVREELDEALRQLSRLTTDLQDEVMK 386
>gnl|CDD|222709 pfam14362, DUF4407, Domain of unknown function (DUF4407). This
family of proteins is found in bacteria. Proteins in this
family are typically between 366 and 597 amino acids in
length. There is a single completely conserved residue R
that may be functionally important.
Length = 297
Score = 31.8 bits (73), Expect = 3.1
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 9/122 (7%)
Query: 1000 DRKILDEYKQRVQELDAKLAE----EIASKTSIIQTLEIQVKELQDKL-RSYTHVENEL- 1053
D +L+ ++ A++A +IA+ T+ I L+ ++ E Q ++ +Y + E
Sbjct: 111 DTVLLEIQQEEQAAAQAQVAAGFRPKIAALTAEIAALQAEIDEAQAEVNAAYQEAQCEAE 170
Query: 1054 GQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNA---KITHAALVEQ 1110
G + V + + E L QL+ A + AA+ E+
Sbjct: 171 GTGGTGVAGKGPVYKEKREKLDAAQARLETLKARLDAAIAQLEAQKAALERNRQAAVAEK 230
Query: 1111 EL 1112
+
Sbjct: 231 QA 232
Score = 31.8 bits (73), Expect = 3.2
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 22/119 (18%)
Query: 619 EEEI-QQLEEDTSILREQLESKDQVDDSIE---KTLRNEIQELHAKLINVEALVNQAQVE 674
E+EI L E EQ ++ QV L EI L A++ +A VN A E
Sbjct: 107 EKEIDTVLLE--IQQEEQAAAQAQVAAGFRPKIAALTAEIAALQAEIDEAQAEVNAAYQE 164
Query: 675 KQA-LDGK-----------YEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEEL 721
Q +G Y+E +EK + + E + +D I L+++K L
Sbjct: 165 AQCEAEGTGGTGVAGKGPVYKEKREKLDAAQARLETLKAR----LDAAIAQLEAQKAAL 219
Score = 31.5 bits (72), Expect = 4.4
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 170 KLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEV--EEWGNNDA 227
+ + + IA I L+AE++ + + E E G
Sbjct: 118 QQEEQAAAQ--AQVAAGFRPKIAALTAEIAALQAEIDEAQAEVNAAYQEAQCEAEGTGGT 175
Query: 228 --WGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGK 280
G KE+ EKL + L + + IA+LEA ++ ++A V+ K
Sbjct: 176 GVAGKGPVYKEKREKLDAAQARLETLKARLDAAIAQLEAQKAALERNRQAAVAEK 230
>gnl|CDD|218368 pfam04992, RNA_pol_Rpb1_6, RNA polymerase Rpb1, domain 6. RNA
polymerases catalyze the DNA dependent polymerisation of
RNA. Prokaryotes contain a single RNA polymerase
compared to three in eukaryotes (not including
mitochondrial. and chloroplast polymerases). This
domain, domain 6, represents a mobile module of the RNA
polymerase. Domain 6 forms part of the shelf module.
This family appears to be specific to the largest
subunit of RNA polymerase II.
Length = 187
Score = 31.3 bits (72), Expect = 3.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 606 KKLEQAVEKQKGLEEEIQQLEEDTSILREQ 635
K+L E QK L+EE +QL ED +LRE+
Sbjct: 47 KELLGDAEVQKLLDEEYEQLLEDRRLLREE 76
>gnl|CDD|221371 pfam12004, DUF3498, Domain of unknown function (DUF3498). This
presumed domain is functionally uncharacterized. This
domain is found in eukaryotes. This domain is typically
between 433 to 538 amino acids in length. This domain is
found associated with pfam00616, pfam00168. This domain
has two conserved sequence motifs: DLQ and PLSFQNP.
Length = 489
Score = 32.0 bits (72), Expect = 3.3
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
Query: 498 LRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQ 557
RQ+ S K +L+ QQ + + +++ + E E R E
Sbjct: 303 PRQQSSSSKGDSPELRPAAGHLQQPSPVNMSALERTAAWVLMNSQYEDIEYETEENREE- 361
Query: 558 LGLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKG 617
+ ++ KERL V L + L + +Q QK
Sbjct: 362 ---------------GTQAEKYEQEIARLKERLRVSVRRLEEYERRLLGQEQQM---QKL 403
Query: 618 LEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQV 673
L+E +LE+ LR Q E KD SI L +EL +++A+V+ Q
Sbjct: 404 LQEYQARLEDSEERLRRQQEEKDSQMKSIISRLMAVEEELKKDHADMQAVVDSKQK 459
>gnl|CDD|233230 TIGR01000, bacteriocin_acc, bacteriocin secretion accessory protein.
This family represents an accessory protein that works
with the bacteriocin maturation and ABC transport
secretion protein described by TIGR01193 [Transport and
binding proteins, Other].
Length = 457
Score = 32.0 bits (73), Expect = 3.5
Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 10/185 (5%)
Query: 1530 RLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSA 1589
+ +N L EN+ +K+ L DN +E + + L +L +++ KS T S
Sbjct: 69 AIKENYLK-ENKFVKKGDLLVVYDNGNEENQKQL----LEQQLDNLKDQKKSLDTLKQSI 123
Query: 1590 SVRSNQQVEA----LTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAE 1645
NQ + Q E L + Q D Q + + L+Q ++
Sbjct: 124 ENGRNQFPTDDSFGYRNLFNGYLAQVESLTSETQQQNDKSQTQNEAAEKTKAQLDQQISK 183
Query: 1646 KDNEIAQSLEFLQGELNN-SYAKNNELTQLISTLQHQLQEARESLSAAGRLSDQLNQKSQ 1704
D ++ N A N L Q QL+ A + S L Q
Sbjct: 184 TDQKLQDYQALKNAISNGTKVANFNPYQSLYENYQAQLKSASDKDQKNQVKSTILATIQQ 243
Query: 1705 TIQEL 1709
I +L
Sbjct: 244 QIDQL 248
>gnl|CDD|220506 pfam09989, DUF2229, CoA enzyme activase uncharacterized domain
(DUF2229). Members of this family include various
bacterial hypothetical proteins, as well as CoA enzyme
activases. The exact function of this domain has not, as
yet, been defined.
Length = 218
Score = 31.4 bits (72), Expect = 3.5
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 150 ISQLTEHNRFLQEEM-----QSLKDKLRDLDE--NVTVEDIKKANESAIAKKDEVIEKLK 202
I L + R L + ++L +L +L + ++ E+IKKA E A+ +++ + L+
Sbjct: 106 IDLLEKGIRLLSPFLNLKDKEALAKRLYELGKKLGISKEEIKKAVEKALEEQEAFKKDLR 165
Query: 203 AELESVEKALREKE 216
+ E L E+
Sbjct: 166 KKGEEALAYLEEEG 179
>gnl|CDD|222613 pfam14235, DUF4337, Domain of unknown function (DUF4337). This
family of proteins is functionally uncharacterized. This
family of proteins is found in bacteria. Proteins in
this family are typically between 187 and 201 amino
acids in length. There is a single completely conserved
residue Q that may be functionally important.
Length = 158
Score = 30.6 bits (70), Expect = 3.6
Identities = 12/52 (23%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 648 KTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQ 699
K+++ + EL A L+ +EA +A+++ + +Y++ K +Y +++ E +
Sbjct: 47 KSIKQHLAELAADLLELEAAAPRAELQAKI--ARYKKEKARYRSEAKELEAK 96
>gnl|CDD|240439 PTZ00491, PTZ00491, major vault protein; Provisional.
Length = 850
Score = 31.9 bits (73), Expect = 3.6
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 559 GLVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENI--ELKKKLEQ----AV 612
LVI N VQ +P++ T + +L E+T SQE + LEQ +
Sbjct: 627 NLVITNVDVQSVEPVDE---RTRDSLQKSVQLAIEITTKSQEAAARHQAELLEQEARGRL 683
Query: 613 EKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQ 672
E+QK + ++ + E+ T +L +L+++ +S ++ + E A+LI EA V QA+
Sbjct: 684 ERQK-MHDKAKAEEQRTKLL--ELQAESAAVESSGQSRAEALAEAEARLIEAEAEVEQAE 740
Query: 673 VEKQALDGKYE-ELKEKYEQMSEKFENQTGKDSVDID 708
+ +AL + E EL++ ++ + E + ++ ++I
Sbjct: 741 LRAKALRIEAEAELEKLRKRQELELEYEQAQNELEIA 777
>gnl|CDD|118197 pfam09665, RE_Alw26IDE, Type II restriction endonuclease
(RE_Alw26IDE). Members of this entry are type II
restriction endonucleases of the Alw26I/Eco31I/Esp3I
family. characterized specificities of the three members
are GGTCTC, CGTCTC and the shared subsequence GTCTC.
Length = 511
Score = 32.1 bits (73), Expect = 3.8
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 74 NQTEVPTTSTVRNGFELMPNVEDYNEK-----IRALNEEVSQLKTKENELHSRIEELEDK 128
+ +R FE +++DYN K L E Q ++ + S + E +K
Sbjct: 399 KYADSQKARRIRIAFE---SLKDYNSKENRNAKEVLTENEEQKISEAVQNLSSLPEASNK 455
Query: 129 LQQKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVTVEDIK 184
L +KI + S S + EE+ + +E + L +L + + E K
Sbjct: 456 LNEKISLKLSSSVESEEEIRSLVTDLPTKEPEKETFTLCRKLLIELMDVIGKELEK 511
>gnl|CDD|236583 PRK09601, PRK09601, GTP-binding protein YchF; Reviewed.
Length = 364
Score = 31.6 bits (73), Expect = 3.9
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 38/133 (28%)
Query: 171 LRDLDENVTVE--------DIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEW 222
L DL+ TVE K ++ A A+ E++EKL LE K R E EE
Sbjct: 134 LADLE---TVEKRLERLEKKAKGGDKEAKAEL-ELLEKLLEHLEE-GKPARTLELTDEEE 188
Query: 223 -----------------GNNDAWGASDD--VKEELEKLVVEKQELIEVIQNHETLIAKLE 263
N D +D +++ ++ +E EV+ + AK+E
Sbjct: 189 KLLKSLQLLTAKPVLYVANVDEDDLADGNPYVKKVREIA--AKEGAEVV----VICAKIE 242
Query: 264 ADLTRVKEEKEAE 276
A++ + +E++AE
Sbjct: 243 AEIAELDDEEKAE 255
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification,
protein turnover, chaperones].
Length = 579
Score = 31.9 bits (73), Expect = 3.9
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 23/107 (21%)
Query: 615 QKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQELHAKLINVEALVNQAQVE 674
++ +E+ D RE +E++++ + S+ +L ++E K+
Sbjct: 489 ERMVEDAEANAALDK-KFRELVEARNEAE-SLIYSLEKALKE-IVKV------------- 532
Query: 675 KQALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKKEEL 721
EE KEK E+ E + +I I+ LQ ++L
Sbjct: 533 -------SEEEKEKIEEAITDLEEALEGEKEEIKAKIEELQEVTQKL 572
>gnl|CDD|233255 TIGR01061, parC_Gpos, DNA topoisomerase IV, A subunit,
Gram-positive. Operationally, topoisomerase IV is a
type II topoisomerase required for the decatenation of
chromosome segregation. Not every bacterium has both a
topo II and a topo IV. The topo IV families of the
Gram-positive bacteria and the Gram-negative bacteria
appear not to represent a single clade among the type II
topoisomerases, and are represented by separate models
for this reason [DNA metabolism, DNA replication,
recombination, and repair].
Length = 738
Score = 32.1 bits (73), Expect = 4.1
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 650 LRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKY-EQMSEKFENQTGKDSVDID 708
L+ E EL K+I++E ++ + + L + EE K+++ +Q + E+ + ++
Sbjct: 432 LKEEQNELEKKIISLEQIIASEKARNKLLKKQLEEYKKQFAQQRRSQIEDFINQIKINES 491
Query: 709 TLIKN 713
LI+N
Sbjct: 492 ELIEN 496
>gnl|CDD|233935 TIGR02577, cas_TM1794_Cmr2, CRISPR-associated protein Cas10/Cmr2,
subtype III-B. This model represent a Crm2 family of
the CRISPR-associated RAMP module, a set of six genes
recurring found together in prokaryotic genomes. This
gene cluster is found only in species with CRISPR
repeats, usually near the repeats themselves. Because
most of the six (but not this family) contain RAMP
domains, and because its appearance in a genome appears
to depend on other CRISPR-associated Cas genes, the set
is designated the CRISPR RAMP module. This protein,
typified by TM1794 from Thermotoga maritima, is
designated Crm2, for CRISPR RAMP Module protein 2
[Mobile and extrachromosomal element functions, Other].
Length = 483
Score = 31.6 bits (72), Expect = 4.1
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 7/164 (4%)
Query: 536 DRESRIEMLSRENEGLRTRVEQLG-LVIENNYVQESDPMNNSLDNTAQLTAEKERLDEEV 594
+ I R N ++ L +E + N EK +
Sbjct: 46 GPDHVIFPSLRGNPFFDLKLANKNELEFRVKGSEEYAELPNLFLAILPAKDEKILEKLQE 105
Query: 595 TVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNE- 653
T+ + EL + L++AV+ I LEE E L+ + + +K L
Sbjct: 106 TIRIKIKDELAELLKKAVKDLIEGPAVITDLEEGLKQKEEALKKELEKYA--DKRLSAPS 163
Query: 654 IQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFE 697
+ E +V+ + KY +E ++SEKF
Sbjct: 164 LLEKEEVYKDVKNGNVGTGLNNV---SKYLSFEESVLKLSEKFL 204
>gnl|CDD|237046 PRK12297, obgE, GTPase CgtA; Reviewed.
Length = 424
Score = 31.6 bits (73), Expect = 4.4
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 1204 RKLNEELARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAA 1263
+ N L R + N DL + EN+ + K+ ++ S + L E+ A
Sbjct: 266 KLYNPRLLERPQIVV-ANKM---DLPEAEENLEEFKEKLGPKVFPISALTGQGLDELLYA 321
Query: 1264 LEKHLSEKYQFEKEALELRTEDLEYKLQEKEK 1295
+ + L E +F E E E++ YK +E+EK
Sbjct: 322 VAELLEETPEFPLEE-EEVEEEVYYKFEEEEK 352
>gnl|CDD|233595 TIGR01845, outer_NodT, efflux transporter, outer membrane factor
(OMF) lipoprotein, NodT family. Members of This model
comprise a subfamily of the Outer Membrane Factor (TCDB
1.B.17) porins. OMF proteins operate in conjunction with
a primary transporter of the RND, MFS, ABC, or PET
systems, and a MFP (membrane fusion protein) to tranport
substrates across membranes. The complex thus formed
allows transport (export) of various solutes (heavy metal
cations; drugs, oligosaccharides, proteins, etc.) across
the two envelopes of the Gram-negative bacterial cell
envelope in a single energy-coupled step. Current data
suggest that the OMF (and not the MFP) is largely
responsible for the formation of both the trans-outer
membrane and trans-periplasmic channels. The roles played
by the MFP have yet to be determined [Cellular processes,
Detoxification, Transport and binding proteins, Porins].
Length = 454
Score = 31.6 bits (72), Expect = 4.4
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 1430 QVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDRPEADGEPAQER 1489
Q+A L QL LA++ + L T+++ + + +V Q ++ EA+ +
Sbjct: 171 QLAALRAQLDVYHAALASRRKTLELTQKRYAAGVAAASDVRQAEAAVASAEAELPSLDVQ 230
Query: 1490 EVVAQH 1495
A++
Sbjct: 231 IAQARN 236
>gnl|CDD|235558 PRK05683, flgK, flagellar hook-associated protein FlgK; Validated.
Length = 676
Score = 31.6 bits (72), Expect = 4.5
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 1629 QASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARES 1688
Q LT Q + ++F + ++ Q + +L+ + N LT I++ Q+ +A
Sbjct: 130 QLLLTQAQGLSKRFNSLSS-QLNQQNSNINSQLSAMTDQVNNLTTSIASYNKQIAQAS-- 186
Query: 1689 LSAAGRLSDQLNQKSQTIQELTEKV 1713
++ +D L+ + + +++L E V
Sbjct: 187 -ASGATPNDLLDARDEAVRQLNELV 210
>gnl|CDD|183688 PRK12694, flgG, flagellar basal body rod protein FlgG; Reviewed.
Length = 260
Score = 31.3 bits (71), Expect = 4.5
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 883 QLKQNLESVKQENTLVVENLQNLI-AQKDYEINAKVTELSIIM 924
L Q V+ N VVE L N+I Q+ YEIN+K S M
Sbjct: 213 TLNQG--YVEASNVNVVEELVNMIQTQRAYEINSKAVTTSDQM 253
>gnl|CDD|237178 PRK12705, PRK12705, hypothetical protein; Provisional.
Length = 508
Score = 31.6 bits (72), Expect = 4.5
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 3/130 (2%)
Query: 1359 EQYNLQLSKSQESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILS 1418
E+ + K E LL+++ R NQQ Q + E + +++ L
Sbjct: 36 ERILQEAQKEAEEKLEAALLEAKELLLRERNQQR-QEARREREELQREEERLVQKEEQLD 94
Query: 1419 EELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKEQLSLAQSQLEEVTQLMSSNDR 1478
KL +L Q+ EK L L E+QL + +A E+ +L+
Sbjct: 95 ARAEKLDNLENQLEEREKALSARELELEELEKQLDNELYR--VAGLTPEQARKLLLKLLD 152
Query: 1479 PEADGEPAQE 1488
E + E AQ
Sbjct: 153 AELEEEKAQR 162
Score = 31.6 bits (72), Expect = 5.0
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 582 QLTAEKERLDEEVTVLSQENIELKKKLEQAV-EKQKGLEEEIQQLEEDTSILREQLESKD 640
L + E +L + E ++KLE A+ E ++ L E Q ++ RE+L
Sbjct: 24 LLKKRQRLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREEL---- 79
Query: 641 QVDDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQALDGKYEELKEKYEQMSEKFENQT 700
E+ L + ++L A+ ++ L NQ + ++AL + EL+E +Q+ +
Sbjct: 80 ---QREEERLVQKEEQLDARAEKLDNLENQLEEREKALSARELELEELEKQLDNELYRVA 136
Query: 701 GKDSVDI-DTLIKNLQSKKEE 720
G L+K L ++ EE
Sbjct: 137 GLTPEQARKLLLKLLDAELEE 157
>gnl|CDD|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD. This
model describes the DndB protein encoded by an operon
associated with a sulfur-containing modification to DNA.
The operon is sporadically distributed in bacteria, much
like some restriction enzyme operons. DndD is described
as a putative ATPase. The small number of examples known
so far include species from among the Firmicutes,
Actinomycetes, Proteobacteria, and Cyanobacteria [DNA
metabolism, Restriction/modification].
Length = 650
Score = 31.6 bits (72), Expect = 4.5
Identities = 48/283 (16%), Positives = 98/283 (34%), Gaps = 38/283 (13%)
Query: 1369 QESSTTLTLLQSELAEQRTLNQQLVQIVNTKHTESNNYHQEILRLNGILSEELPKLKDLG 1428
++ S + + SE+ ++ + E + E+ L K + G
Sbjct: 198 RKKSELPSSILSEIEALEAELKEQSEKYEDLAQEIAHLRNELEEAQRSLESLEKKFRSEG 257
Query: 1429 G-------QVATLEKQLKTTSETLATKERQLAET-----------------------KEQ 1458
G Q+ K+++ + + R+LA +Q
Sbjct: 258 GDLFEEREQLERQLKEIEAARKANRAQLRELAADPLPLLLIPNLLDSTKAQLQKEEQSQQ 317
Query: 1459 LSLAQSQLEEVTQLMSSNDRPEADGEPAQEREVVAQHVAPVETSRERNELALRLQNLQEE 1518
L Q +LEE + + + A +E+ A+ + + +E+ RL +
Sbjct: 318 NQLTQEELEERDKELLESLPKLALPAE-HVKEIAAELAEIDKPATTDSEIPHRLSGSELT 376
Query: 1519 KTMLLTE--INDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHVKLREAE 1576
+ +L + +L+ ++ L E L++ L E D + +E+ I L +L EA+
Sbjct: 377 QLEVLIQQVKRELQDAKSQLLKELRELEEEL--AEVDKKISTIPSEEQIAQLLEELGEAQ 434
Query: 1577 ERVKSSATAY---TSASVRSNQQVEALTSQVKSLTEQKEKLQE 1616
+ S + +EAL + T+QK E
Sbjct: 435 NELFRSEAEIEELLRQLETLKEAIEALRKTLDEKTKQKINAFE 477
Score = 31.2 bits (71), Expect = 6.9
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 1596 QVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLE 1655
++EAL +++K +E+ E L +++ + +++ Q SL +L+ + E + LE
Sbjct: 210 EIEALEAELKEQSEKYEDLAQEIAHLRNELEEAQRSLESLEKKFRSEGGDLFEE-REQLE 268
Query: 1656 FLQGELNNSYAKNN-ELTQLISTLQHQLQEAR--ESLSAAGRLSDQLNQKSQTIQELTEK 1712
E+ + N +L +L + L +S A + +Q Q T +EL E+
Sbjct: 269 RQLKEIEAARKANRAQLRELAADPLPLLLIPNLLDSTKAQLQKEEQSQQNQLTQEELEER 328
Query: 1713 VNQLMEELNK 1722
+L+E L K
Sbjct: 329 DKELLESLPK 338
>gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell
division and chromosome partitioning].
Length = 570
Score = 31.6 bits (72), Expect = 5.2
Identities = 59/317 (18%), Positives = 129/317 (40%), Gaps = 48/317 (15%)
Query: 37 SDNSDEISEAYDMLQNEYDDLKQKFDEVVNRTKSDNGNQTEVPTTSTVRNGFELMPNVED 96
N + EA L+ + ++++++ + V T S + + E++ E+
Sbjct: 156 LANRHQYGEAAPELEKKLENIEEELSQFVELTSSGDYIEAR-----------EVLEEAEE 204
Query: 97 YNEKIRALNEEV-SQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQLTE 155
+ +R++ E + S L + EL ++++L+ + ++ Y LE I+
Sbjct: 205 HMIALRSIMERIPSLLAELQTELPGQLQDLKAGYRDMKEEG----YHLEHVNID------ 254
Query: 156 HNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREK 215
++ LK++L + E +T ++ +A E + E IE L LE +A
Sbjct: 255 ------SRLERLKEQLVENSELLTQLELDEAEEE-LGLIQEKIESLYDLLEREVEAKNVV 307
Query: 216 ESEVEEWGNNDAWGASDDVKEELEKLVVEKQELIE----------VIQNHETLIAKLEAD 265
E + + + KE E L E + + E ++ E + +LE+
Sbjct: 308 EENLPILPDY-----LEKAKENNEHLKEEIERVKESYRLAETELGSVRKFEKELKELESV 362
Query: 266 LTRVKEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQD 325
L + E EA+ E ++E++ + +E ++ ++ L ++ ++
Sbjct: 363 LDEILENIEAQEVAYSELQDNLEEIEKALTDIEDEQEKVQEHLTSLRKDE----LEAREN 418
Query: 326 IEALKKENEEIKEKLAK 342
+E LK + EIK + K
Sbjct: 419 LERLKSKLHEIKRYMEK 435
>gnl|CDD|117761 pfam09208, Endonuc-MspI, Restriction endonuclease MspI. Members of
this family of prokaryotic restriction endonucleases
recognise the palindromic tetranucleotide sequence
5'-CCGG and cleave between the first and second
nucleotides, leaving 2 base 5' overhangs. They fold into
an alpha/beta architecture, with a five-stranded mixed
beta-sheet sandwiched on both sides by alpha-helices.
Length = 263
Score = 31.1 bits (70), Expect = 5.3
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 1511 RLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSELVKAEQTIQDLHV 1570
RL NL E ++ +ND+ YN N ++ L +Q L V
Sbjct: 28 RLGNLYE--KYIVDILNDI--ENLKKYNTNAFAQEKYDDISSKLLKALNLDKQLDNILEV 83
Query: 1571 KLREAEERVKSSATAYTSASVR---SNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQK 1627
+ R+ + + T A++R N++ + +K+ +++K + E Y ED+
Sbjct: 84 TSTDDIGRLINGGSPKTDATIRFTFHNKESRIVNISIKNTSKKKVSIHE--YDVEDICTG 141
Query: 1628 HQASLTNLQIVLEQFQ 1643
S +L+ ++ +FQ
Sbjct: 142 VGISDGDLKELIRKFQ 157
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton].
Length = 3164
Score = 31.9 bits (72), Expect = 5.3
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQ----QKIDDEKSVSYQLEEKAIE 149
V YNE R + E QL L + + +D L ++++ E + + +
Sbjct: 2101 VRKYNEYGRGMGELKEQLSNTVVILGVKEKNADDALSGTPGERLEREVKSVFVEAPRDML 2160
Query: 150 ISQLTEHNRFLQEEMQSLKDKLRDLDENV-TVEDIKKANESAIAKKDEVIEKLKAELESV 208
E + M+ K + E V V IKKA+ I L E+E V
Sbjct: 2161 FLLEEEVRKRKGSVMKFKSSKKPAVLEAVLFVYKIKKASLREIRSFIRPPGDLCIEMEDV 2220
Query: 209 EKAL 212
L
Sbjct: 2221 CDLL 2224
>gnl|CDD|236726 PRK10618, PRK10618, phosphotransfer intermediate protein in
two-component regulatory system with RcsBC; Provisional.
Length = 894
Score = 31.4 bits (72), Expect = 5.6
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 1668 NNELTQLISTLQHQLQEARESLSAAG--RLSDQLNQKSQTIQELTEKVNQLMEEL 1720
+EL Q + +L + R++ DQL ++S + L + + QL+ L
Sbjct: 458 GDELKQPLQSLAQLAAQLRQTSDEEQQQPELDQLAEQSDVLVRLVDNI-QLLNML 511
>gnl|CDD|202517 pfam03051, Peptidase_C1_2, Peptidase C1-like family. This family is
closely related to the Peptidase_C1 family pfam00112,
containing several prokaryotic and eukaryotic
aminopeptidases and bleomycin hydrolases.
Length = 438
Score = 31.2 bits (71), Expect = 5.6
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 1219 TLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLSEKYQFEKEA 1278
+ N+ + LN IL K + +L++ + +E+QA E+ LSE ++ A
Sbjct: 160 SFNSEASRRLND----ILNTKLRKDALILRRLVEEGADDEEIQAKKEEMLSEIFRVLAIA 215
Query: 1279 LEL--RTEDLEYKLQEKE 1294
L T D EY+ ++K
Sbjct: 216 LGEPPETFDFEYRDKDKN 233
>gnl|CDD|132534 TIGR03495, phage_LysB, phage lysis regulatory protein, LysB family.
Members of this protein family are phage lysis
regulatory protein, including the well-studied protein
LysB (lysis protein B) of Enterobacteria phage P2. For
members of this family, genes are found in phage or in
prophage regions of bacterial genomes, typically near a
phage lysozyme or phage holin.
Length = 135
Score = 30.1 bits (68), Expect = 5.7
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 484 SSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHP---VDQQVQD---- 536
S L R + + L Q+ ++ QL + + QQ+
Sbjct: 17 QSQRLRNARADLERANRVLKAQQAELASKANQLIVLLALAKRNEEAQAQLRQQLAQARAL 76
Query: 537 ---RESRIEMLSRENEGLRT 553
RE RIE L RENE LR
Sbjct: 77 LAQREQRIERLKRENEDLRR 96
>gnl|CDD|217803 pfam03938, OmpH, Outer membrane protein (OmpH-like). This family
includes outer membrane proteins such as OmpH among
others. Skp (OmpH) has been characterized as a molecular
chaperone that interacts with unfolded proteins as they
emerge in the periplasm from the Sec translocation
machinery.
Length = 157
Score = 30.3 bits (69), Expect = 5.7
Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 1058 SKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNAKITHAALV--EQELGEM 1115
S+ + Q +LE E + E + K L + +L A ++ A +QEL +
Sbjct: 28 SESPAGKAAQKQLEKEFKKLQAELQKKEKELQKEEQKLQKQAATLSEEARKAKQQELQQK 87
Query: 1116 KNQMQTLEYEKQELLKQIQEESIASNFLKNELQSLQDAFSVMKSDNASLLLEKNTLM 1172
+ ++Q + Q+ L+Q Q+E + + +++ V K L+L+K+ ++
Sbjct: 88 QQELQQKQQAAQQELQQKQQELLQP--IYDKIDKAIKE--VAKEKGYDLVLDKSAVL 140
>gnl|CDD|219176 pfam06785, UPF0242, Uncharacterized protein family (UPF0242).
Length = 401
Score = 31.0 bits (70), Expect = 5.8
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 534 VQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPM---NNSLDNT--------AQ 582
Q +++I L+ ++EGLR E + +ESD + N L N +
Sbjct: 70 GQLLQTKIRKLTEQDEGLRNIRESI-----EERQKESDQLKLQNQKLVNQLGHARGVFIK 124
Query: 583 LTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQV 642
++L+E L +EN L+ +L+ V++ EE Q+L + L E L + ++
Sbjct: 125 TKGRYQKLEELSRHLKEENQCLQIQLDALVQECNEKIEENQELNRE---LAETLAYQQEL 181
Query: 643 DDSIEKTLRNEIQELHAKLINVEALVNQAQ 672
+D + T + L + + L + Q
Sbjct: 182 NDEYQATFVEQHNMLDKRQAYIGKLEAKVQ 211
>gnl|CDD|185368 PRK15471, PRK15471, chain length determinant protein WzzB;
Provisional.
Length = 325
Score = 30.9 bits (70), Expect = 6.0
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 968 SVQAENISIKQMNEEL--------QALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLA 1019
S AE + ++ E+L QAL ++ T E +K L +Y +Q++D ++A
Sbjct: 104 SALAETLDNQEEPEKLTIEPSVKGQALPLSVSYVGQTAEGAQKKLAQY---IQQVDDQVA 160
Query: 1020 EEIASKTSIIQTLEIQVKELQDKLRSYTHVENELGQYRSKV 1060
+E+ + + ++ K LQD L + V E R K
Sbjct: 161 KELEK--DLKDNIALRTKTLQDSLETQEVVAQEQKDLRIKQ 199
>gnl|CDD|163064 TIGR02894, DNA_bind_RsfA, transcription factor, RsfA family. In a
subset of endospore-forming members of the Firmcutes,
members of this protein family are found, several to a
genome. Two very strongly conserved sequences regions
are separated by a highly variable linker region. Much
of the linker region was excised from the seed alignment
for this model. A characterized member is the
prespore-specific transcription RsfA from Bacillus
subtilis, previously called YwfN, which is controlled by
sigma factor F and seems to fine-tune expression of some
genes in the sigma-F regulon. A paralog in Bacillus
subtilis is designated YlbO [Regulatory functions, DNA
interactions, Cellular processes, Sporulation and
germination].
Length = 161
Score = 30.1 bits (68), Expect = 6.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 581 AQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQL 625
L E ERL + L + N EL+K+LE+ ++ +EE+ Q L
Sbjct: 100 QALQKENERLKNQNESLQKRNEELEKELEKLRQRLSTIEEDYQTL 144
>gnl|CDD|184940 PRK14977, PRK14977, bifunctional DNA-directed RNA polymerase A'/A''
subunit; Provisional.
Length = 1321
Score = 31.5 bits (71), Expect = 6.1
Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 8/178 (4%)
Query: 1505 RNELALRLQNLQEEKTMLLTEINDLRLNQNTLYNENERLKQHLLKTEEDNTSEL-VKAEQ 1563
RN L+++ L + + L + + E + E
Sbjct: 1053 RNLKELKVRALIADSAIDNANEIKLIKPDKRALENGCIPMERFAEIEAALAKGKKFEMEL 1112
Query: 1564 TIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAED 1623
+ + L EA +R K AT N+ ++ V + +L EK + E
Sbjct: 1113 EDDLIILDLVEAADRDKPLATLIAI----RNKILDKPVKGVPDIERAWVELVEKDGRDEW 1168
Query: 1624 VVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQGELNNSYAKNNELTQLISTLQHQ 1681
++Q S +NL VLE + N I + G L A+N +L S L+ Q
Sbjct: 1169 IIQ---TSGSNLAAVLEMKCIDIANTITNDCFEIAGTLGIEAARNAIFNELASILEDQ 1223
>gnl|CDD|131541 TIGR02488, flgG_G_neg, flagellar basal-body rod protein FlgG,
Gram-negative bacteria. This family consists of the
FlgG protein of the flagellar apparatus in the
Proteobacteria and spirochetes [Cellular processes,
Chemotaxis and motility].
Length = 259
Score = 30.8 bits (70), Expect = 6.1
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 883 QLKQNLESVKQENTLVVENLQNLI-AQKDYEINAKV 917
+L+Q ++ N VV+ + ++I AQ+ YE+N+K
Sbjct: 211 KLRQG--FLEASNVNVVQEMVDMITAQRAYEMNSKA 244
>gnl|CDD|147975 pfam06103, DUF948, Bacterial protein of unknown function (DUF948).
This family consists of bacterial sequences several of
which are thought to be general stress proteins.
Length = 90
Score = 28.7 bits (65), Expect = 6.2
Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 1669 NELTQLISTLQHQLQ----EARESLSAAGRLSDQLNQKSQTIQELTEKVNQLMEELNK 1722
+E+ + ++ L Q+ E + L+ L + +N K +T+ + + V L E ++
Sbjct: 29 DEVNKTLAGLTKQVDGITTETEDLLAKTNVLLEDVNGKVETLDPVFQAVADLGESVSD 86
>gnl|CDD|220368 pfam09730, BicD, Microtubule-associated protein Bicaudal-D. BicD
proteins consist of three coiled-coiled domains and are
involved in dynein-mediated minus end-directed transport
from the Golgi apparatus to the endoplasmic reticulum
(ER). For full functioning they bind with GSK-3beta
pfam05350 to maintain the anchoring of microtubules to
the centromere. It appears that amino-acid residues
437-617 of BicD and the kinase activity of GSK-3 are
necessary for the formation of a complex between BicD
and GSK-3beta in intact cells.
Length = 711
Score = 31.3 bits (71), Expect = 6.3
Identities = 80/415 (19%), Positives = 145/415 (34%), Gaps = 63/415 (15%)
Query: 270 KEEKEAEVSGKLEQDAMVKELKSKVETLEASLKQKEQELEGWTDNDNWGSSGNEQDIEA- 328
+ +E E S E + ++ L+A LKQ EL + SS +++ E
Sbjct: 12 ADGEEREESLLQESASKEAYYLQRILELQAELKQLRAELSNVQAENERLSSLSQELKEEN 71
Query: 329 ---------LKKENEEIKEKLAKQESTLAKLKTHSESLQKQ---LLEKEMELEEWGNNDS 376
L+ E +E K + A+ ++L+ + SLQKQ L + ++E E
Sbjct: 72 EMLELQRGRLRDEIKEYKFREARLLQDYSELEEENISLQKQVSVLRQSQVEFE------- 124
Query: 377 WGGDNDKLATLQQENKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTEL 436
L+ E + L E+ L +QL EEA + KE + E + +
Sbjct: 125 ---------GLKHEIRRLEEETELLNSQL---EEAARLKEIAEKQLEEALETLKTEREQK 172
Query: 437 NNLR------------AKCSEFEKTIVELKSQEELLKQALIDKENE-------------- 470
N LR S ++ LK E+ + + E
Sbjct: 173 NALRKELSHHLNLEDFYSLSNLSISLDGLKFSEDPEASTEPNNDGEDENGHLNGGPGLAK 232
Query: 471 LSEWGQTNEWGSPSSSDLNTLREESGLLRQKLSEQKVIISKLKTQLEAAQQGTSSHSHPV 530
+ E P+ + E + QKL +Q + + K L A Q +
Sbjct: 233 SLGTPRKGELFPPAPGVSDLFSELNLSEIQKLKQQLEQVEREKASLLANLQELQTQLEQS 292
Query: 531 DQQVQDRESRIEMLSRENEGLRTRVEQLGLVIENNYVQESDPMNNSLDNTAQLTAEKERL 590
+ + ++ ++ L+ LR + ++ + D E L
Sbjct: 293 EGALSEQHEKVNRLTEHLNALRNLQASKEQQDGLDSEKDRGS-HEDGDYYEVDINGPEIL 351
Query: 591 DEEVTVLSQENIELKKKLEQAVEK----QKGLEEEIQQLEEDTSILREQLESKDQ 641
+ + V E ELK +L+ + Q+ E+E +L + L E+L S ++
Sbjct: 352 ECKYRVAVSEVGELKAELKALKARYNELQERYEDEKDRLRNEIQNLAEKLLSLEK 406
>gnl|CDD|227250 COG4913, COG4913, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 1104
Score = 31.1 bits (70), Expect = 7.0
Identities = 54/316 (17%), Positives = 111/316 (35%), Gaps = 25/316 (7%)
Query: 981 EELQALTETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQ 1040
ELQA E L T + + LD + R + L+ + +E+ + + L+ + L
Sbjct: 677 AELQARLERLTHTQSDIAIAKAALDAAQTRQKVLERQYQQEVTECAGLKKDLK-RAAMLS 735
Query: 1041 DKLRSYTHVENELGQYRSKVYELEQIQARLEAERTQWIHEFEVKTNTLSDLQTQLDTYNA 1100
K+ S + G ++ A + + I E + LQ ++D NA
Sbjct: 736 RKVHSIA-KQGMTGALQALGAAHFPQVAPEQHDDIVDIERIEHR----RQLQKRIDAVNA 790
Query: 1101 KITHAALVEQELGEMKNQMQTLEYEKQELLKQIQEESIASNFLKNELQS---------LQ 1151
++ L E+ +G M + + E+ ++ + L L Q
Sbjct: 791 RLRR--LREEIIGRMSDAKKEDTAALSEVGAELDDIPEYLARL-QTLTEDALPEFLARFQ 847
Query: 1152 DAFSVMKSDNASLLLEKNTLMETKLTLEAQLKELADN--ETQYKQMQIVYEDTQRKLNEE 1209
+ + D + LL L + +E +++ + D+ + + ++ D ++
Sbjct: 848 ELLNRSSDDGVTQLLSH--LDHERALIEERIEAINDSLRRVDFNSGRYLHIDIAKQPVPH 905
Query: 1210 LARRDATIATLNTTGAPDLNASIENILKEKDATLSEMLKKSEAKDKTLQEMQAALEKHLS 1269
+ R A T + E+ K A + ++ E D A+ L
Sbjct: 906 DSMRTFQQALRALTSGRFVGDDGESQYKALQALVGLIIDACERHDSADTRWARAV---LD 962
Query: 1270 EKYQFEKEALELRTED 1285
+++ E E ED
Sbjct: 963 PRFRLEFAVSERERED 978
>gnl|CDD|129661 TIGR00570, cdk7, CDK-activating kinase assembly factor MAT1. All
proteins in this family for which functions are known
are cyclin dependent protein kinases that are components
of TFIIH, a complex that is involved in nucleotide
excision repair and transcription initiation. Also known
as MAT1 (menage a trois 1). This family is based on the
phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis,
Stanford University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 309
Score = 30.5 bits (69), Expect = 7.5
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 121 RIEELEDKLQQK-IDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLRDLDENVT 179
R++ ED +K +D K V ++ + L E+N +L+E ++D + +L N+
Sbjct: 59 RVQLFEDPTVEKEVDIRKRVLKIYNKREEDFPSLREYNDYLEE----VEDIVYNLTNNID 114
Query: 180 VEDIKKANESAIAKKDEVI----EKLKAELESVEKALR-EKESEV----------EEWGN 224
+E+ KK E+ + +VI EK E E +E+AL EKE E EE
Sbjct: 115 LENTKKKIETYQKENKDVIQKNKEKSTREQEELEEALEFEKEEEEQRRLLLQKEEEEQQM 174
Query: 225 NDAWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVS 278
N + + L++L E+I H+ KLE + + K EK S
Sbjct: 175 NKRK----NKQALLDELETSTLPAAELIAQHKKNSVKLEMQVEKPKPEKPNTFS 224
>gnl|CDD|234541 TIGR04320, Surf_Exclu_PgrA, SEC10/PgrA surface exclusion domain.
This model describes a conserved domain found in surface
proteins of a number of Firmutes. Many members have LPXTG
C-terminal anchoring motifs and a substantial number have
the KxYKxGKxW putative sorting signal at the N-terminus.
The tetracycline resistance plasmid pCF10 in Enterococcus
faecalis promotes conjugal plasmid transfer in response
to sex pheromones, but PgrA/Sec10 encoded by that
plasmid, a member of this family, specifically inhibits
the ability of cells to receive homologous plasmids. The
phenomenon is called surface exclusion.
Length = 356
Score = 30.8 bits (70), Expect = 7.6
Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 9/108 (8%)
Query: 1552 EDNTSELVKAEQTIQDLHVKLREAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQK 1611
+ + L A+ + L A+ + ++ TAY +A + ++ + Q
Sbjct: 257 KALQAALATAQADLAAAQTALNTAQAALTTAQTAYAAA----QAALATAQKELANAQAQA 312
Query: 1612 EKLQEKLYQ-AEDVVQKHQASLTNLQIVLEQFQAEKDNEIAQSLEFLQ 1658
+ + A+ + +A L + L A+ +A+ L
Sbjct: 313 LQTAQNNLATAQAALANAEARLAKAKEALANLNAD----LAKKQAALD 356
>gnl|CDD|219934 pfam08614, ATG16, Autophagy protein 16 (ATG16). Autophagy is a
ubiquitous intracellular degradation system for
eukaryotic cells. During autophagy, cytoplasmic
components are enclosed in autophagosomes and delivered
to lysosomes/vacuoles. ATG16 (also known as Apg16) has
been shown to be bind to Apg5 and is required for the
function of the Apg12p-Apg5p conjugate in the yeast
autophagy pathway.
Length = 194
Score = 30.2 bits (68), Expect = 7.9
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 322 NEQDIEALKKENEEIKEKLAKQESTLAKLKTHSESLQKQLLEKEMELEEWGNNDSWGGDN 381
Q + L E E+++ ++ + E T+A+L++ SL+ ++ + EL+E
Sbjct: 93 LAQRLLLLNDELEQLRREIQQLEKTIAELRSEITSLETEIRDLREELQE--KEKDNETLQ 150
Query: 382 DKLATLQQENKVLNEKVSELQ 402
D+L +L E L EK+ +LQ
Sbjct: 151 DELISLNIELNALEEKLRKLQ 171
>gnl|CDD|237192 PRK12758, PRK12758, DNA topoisomerase IV subunit A; Provisional.
Length = 869
Score = 31.1 bits (71), Expect = 7.9
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 117 ELHSRIEELEDKLQ----QKIDDEKSVSYQLEEKAIEISQLTEHNRFLQEEMQSLKDKLR 172
EL R+ ELE++ +KI E+ + Y+ E+A + E + L+ +
Sbjct: 348 ELEIRLSELEEQWHFASLEKIFIEERI-YKEIEEAETWEAVIEAID------KGLEPFKK 400
Query: 173 DLDENVTVEDIKKANESAIA--------KKDEVIEKLKAELESVEKALRE 214
VT +DI + E I K DE+I +L+AE+ V+ L
Sbjct: 401 QFIREVTEDDIVRLTEIKIKRISKFDSDKADELIARLEAEIAEVKHHLAH 450
>gnl|CDD|221489 pfam12252, SidE, Dot/Icm substrate protein. This family of proteins
is found in bacteria. Proteins in this family are
typically between 397 and 1543 amino acids in length.
This family is the SidE protein in the Dot/Icm pathway of
Legionella pneumophila bacteria. There is little
literature describing the family.
Length = 1443
Score = 31.0 bits (70), Expect = 8.1
Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 17/162 (10%)
Query: 563 ENNYVQESDPMNNSLDNTAQLTAEKERLDEEVTVLSQENIELKKKLEQAVEKQKGLEEEI 622
+ +Q++ + L+ T + E+L E++ L I +K + V+ Q E I
Sbjct: 1280 QEKEIQQNFELLAKLEKTLDKSDTAEKLREDIPKLKDLLIAKQKAYPEMVQLQYKSEALI 1339
Query: 623 QQLEEDTSILREQLESKDQV------DDSIEKTLRNEIQELHAKLINVEALVNQAQVEKQ 676
QL E + L E + + L + N+ L ++E
Sbjct: 1340 TQLRELCQAHHDDLAKTRTARLQELDRQDREGGITGIVGNLFWGVTNMVGLTTDERLE-- 1397
Query: 677 ALDGKYEELKEKYEQMSEKFENQTGKDSVDIDTLIKNLQSKK 718
+K K +Q +F+ + D D D LI NL K
Sbjct: 1398 --------IKMK-QQSLARFKTELFNDKNDTDQLISNLAKKS 1430
>gnl|CDD|184281 PRK13729, PRK13729, conjugal transfer pilus assembly protein TraB;
Provisional.
Length = 475
Score = 30.9 bits (70), Expect = 8.2
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 502 LSEQKVIISKLKTQLEAAQQGTSSHSHPVDQQVQDRESRIEMLSRENEGLRTRVEQLG 559
+E +V ++++ Q E ++ + +Q D + RIE L ++N L +V+ LG
Sbjct: 71 TTEMQVTAAQMQKQYEEIRRELDVLN----KQRGDDQRRIEKLGQDNAALAEQVKALG 124
>gnl|CDD|220388 pfam09766, FimP, Fms-interacting protein. This entry carries part
of the crucial 144 N-terminal residues of the FmiP
protein, which is essential for the binding of the
protein to the cytoplasmic domain of activated
Fms-molecules in M-CSF induced haematopoietic
differentiation of macrophages. The C-terminus contains
a putative nuclear localisation sequence and a leucine
zipper which suggest further, as yet unknown, nuclear
functions. The level of FMIP expression might form a
threshold that determines whether cells differentiate
into macrophages or into granulocytes.
Length = 352
Score = 30.8 bits (70), Expect = 8.3
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 110 QLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL-TEHNRFLQEEMQSLK 168
LK H RIE+ DK ++ D S+ QL+ E S L E NR L + + +
Sbjct: 2 TLKKANRLAHIRIEKGRDKTHEEKDKVDSLRLQLQNLLYEKSHLEKEINRCLDFKSKDEE 61
Query: 169 DKLRDLDE--NVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALREKESEVEEWGNND 226
+L L+E EDI + ++ + + + ++ +L+ ELE K L
Sbjct: 62 IELVPLEEFYAQAPEDISRPEKTPLDEHNLMLARLEWELE-QRKEL-------------- 106
Query: 227 AWGASDDVKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKE 271
E+L++L EK++L + I+ + ++ L L +K+
Sbjct: 107 --------AEKLKELESEKEKLQQDIEKKKEFLSSLPPKLKDLKK 143
>gnl|CDD|237258 PRK12903, secA, preprotein translocase subunit SecA; Reviewed.
Length = 925
Score = 30.8 bits (70), Expect = 8.5
Identities = 31/248 (12%), Positives = 88/248 (35%), Gaps = 25/248 (10%)
Query: 598 SQENIELKKKLEQAVEKQKGLEEEIQQLEEDTSILREQLESKDQVDDSIEKTLRNEIQEL 657
+ EL + L +A+ + ++ Q + + ++ + + +++K +N I +
Sbjct: 674 NYHKEELAQYLIEALNEI--YFKKRQVILDKIALNTFFESERYIILSALDKYWQNHIDTM 731
Query: 658 HAKLINVEALV-----NQAQVEKQALDGKYEELKEK--YEQMSEKFENQTGKDSVDIDTL 710
KL + LV N QV + K+ L ++ Y+ + F N + + I +
Sbjct: 732 -DKLRSGVNLVQYSQKNPYQVYTEEGTKKFNILLQEIAYDVIVSLFNNPNAEKILIITEI 790
Query: 711 IKNLQSKKEELCRLLDEKNTL---DNIKVEKENLEIQLDNLNTNYQDKINTLIQSKNDLE 767
+ + + + R + + + + +++ ++ + + + IN ++
Sbjct: 791 LSDGINNSDINDRPQELIDQIIESEEERLKALRIQREEMLMRPEELELINEEQKNLKQEI 850
Query: 768 AKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSIL------------DLERNLDEK 815
+ IN+ F+ + L + I+ D + ++
Sbjct: 851 KLELSEIQEAEEEIQNINENKNEFVEFKNDPKKLNKLIIAKDVLIKLVISSDEIKQDEKT 910
Query: 816 LKEFNEKE 823
K+ +
Sbjct: 911 TKKKKKDL 918
>gnl|CDD|203570 pfam07058, Myosin_HC-like, Myosin II heavy chain-like. This family
represents a conserved region within a number of myosin
II heavy chain-like proteins that seem to be specific to
Arabidopsis thaliana.
Length = 351
Score = 30.4 bits (68), Expect = 8.7
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 94 VEDYNEKIRALNEEVSQLKTKENELHSRIEELEDKLQQKIDDEKSVSYQLEEKAIEISQL 153
V DY K + +NEE KT E EL +R + +++ + +E +K + + Q
Sbjct: 61 VRDYQRKFQEMNEE---RKTLEREL-ARAKVSANRVATVVANEWKDE---NDKVMPVKQW 113
Query: 154 TEHNRFLQEEMQSLKDKLRDLDENVTVEDIKKANESAIAKKDEVIEKLKAELESVEKALR 213
E RFLQ EMQ L+DKL ++ A + ++ EK K L+ +E+ L+
Sbjct: 114 LEERRFLQGEMQQLRDKL-------------AISDRAAKSEAQLKEKFKLRLKVLEEGLK 160
>gnl|CDD|235638 PRK05896, PRK05896, DNA polymerase III subunits gamma and tau;
Validated.
Length = 605
Score = 30.6 bits (69), Expect = 9.1
Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 16/178 (8%)
Query: 736 VEKENLEIQLDNLNTNYQDKINTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFE 795
+ E ++ NTN+ +N + N L+A ++++ + +
Sbjct: 315 LNLEKQKLLSIEFNTNFL--LNNFVSLINRLKASVNQVFEFE----------IYLYKIIN 362
Query: 796 ENNAFLQRSILDLERNLDEKLKEFNE----KEISYNENIEASNHKIQQLTQETDTLKAEL 851
N L+ +++ ++K ++ K+I+ E ++ L + +
Sbjct: 363 ANPDKLENKKIEISIKPEKKTINNSQIITTKKINIVEESNKNSVHFDTLYKTKIFYHKKK 422
Query: 852 VAQAESTQLVKQEQALLAAAPVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQK 909
+ Q Q +K+E+ L + +N +L NLE KQ+ L + QK
Sbjct: 423 INQNNKEQDIKKEELLEKEFVKKSEKIPKNDELLDNLELAKQKFFNKDIELSKNMLQK 480
>gnl|CDD|232965 TIGR00414, serS, seryl-tRNA synthetase. This model represents the
seryl-tRNA synthetase found in most organisms. This
protein is a class II tRNA synthetase, and is recognized
by the pfam model tRNA-synt_2b. The seryl-tRNA
synthetases of two archaeal species, Methanococcus
jannaschii and Methanobacterium thermoautotrophicum,
differ considerably and are included in a different
model [Protein synthesis, tRNA aminoacylation].
Length = 418
Score = 30.4 bits (69), Expect = 9.1
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 234 VKEELEKLVVEKQELIEVIQNHETLIAKLEADLTRVKEEKEAEVSGKLEQDAMVKELKSK 293
V +LEKL+ E +++ E L AK ++ + K + E +KELK +
Sbjct: 25 VDIDLEKLIALDDERKKLLSEIEELQAKRNELSKQIGKAKGQKKDKIEEIKKELKELKEE 84
Query: 294 VETLEASLKQKEQELE 309
+ L A+LK E EL+
Sbjct: 85 LTELSAALKALEAELQ 100
>gnl|CDD|168717 PRK06882, PRK06882, acetolactate synthase 3 catalytic subunit;
Validated.
Length = 574
Score = 30.7 bits (69), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 17/68 (25%)
Query: 391 NKVLNEKVSELQTQLLSVEEALKKKENDLEDWGEGDDWGTGNSTELNNLRA-KCSEFEKT 449
VL E +S L+ EE L K + DL W W ++N +A KC EF++T
Sbjct: 325 KNVLEEFLSLLE------EENLAKSQTDLTAW-----W-----QQINEWKAKKCLEFDRT 368
Query: 450 IVELKSQE 457
+K Q+
Sbjct: 369 SDVIKPQQ 376
>gnl|CDD|236038 PRK07521, flgK, flagellar hook-associated protein FlgK; Validated.
Length = 483
Score = 30.7 bits (70), Expect = 9.3
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 18/95 (18%)
Query: 1652 QSLEFLQGELNNSYAKNNELTQLISTLQHQLQEARES----------LSAAGRLSDQLNQ 1701
+ L G+ + + + +S Q LQ A S + AA L++ LN
Sbjct: 85 ERLASTVGDNDYEGS----PSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLND 140
Query: 1702 KSQTIQELTEKVNQLMEE----LNKKEAKLKEVNN 1732
S +Q + + + LN A+ ++ NN
Sbjct: 141 ASDAVQSARADADAEIADSVDTLNDLLAQFEDANN 175
>gnl|CDD|234271 TIGR03591, polynuc_phos, polyribonucleotide nucleotidyltransferase.
Members of this protein family are polyribonucleotide
nucleotidyltransferase, also called polynucleotide
phosphorylase. Some members have been shown also to have
additional functions as guanosine pentaphosphate
synthetase and as poly(A) polymerase (see model
TIGR02696 for an exception clade, within this family)
[Transcription, Degradation of RNA].
Length = 684
Score = 30.5 bits (70), Expect = 9.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 167 LKDKLRDLDENVTVEDI-----KKANESAIAK-KDEVIEKLKAELESVEKALREKE 216
LK K+++L +++ K+ +A+ K+EV+E L E E E+A REKE
Sbjct: 233 LKAKVKELAYEAGLKEAYQITEKQERYAALDAIKEEVLEALAEEEEEEEEADREKE 288
>gnl|CDD|130673 TIGR01612, 235kDa-fam, reticulocyte binding/rhoptry protein. This
model represents a group of paralogous families in
plasmodium species alternately annotated as reticulocyte
binding protein, 235-kDa family protein and rhoptry
protein. Rhoptry protein is localized on the cell surface
and is extremely large (although apparently lacking in
repeat structure) and is important for the process of
invasion of the RBCs by the parasite. These proteins are
found in P. falciparum, P. vivax and P. yoelii.
Length = 2757
Score = 30.8 bits (69), Expect = 9.7
Identities = 107/489 (21%), Positives = 199/489 (40%), Gaps = 62/489 (12%)
Query: 592 EEVTVLSQENIELKKKLEQAVEKQKGLEEEIQQL--------EEDTSILREQLESKDQVD 643
E + E+KK+LE+ E LE+EI+ L +E I + +LE K+++
Sbjct: 551 ELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIK 610
Query: 644 DSIEKTLRNEIQELHAKLINVEALV--NQAQVEKQALDGKY---EELKEKYEQMSEKFEN 698
+ +K E K I+++ ++ N A +++ A Y E LK K + S
Sbjct: 611 NISDK------NEYIKKAIDLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKSE 664
Query: 699 QTGKDSVDIDTLIKNLQS-KKEELCRLLDEKNTLDNIKVEKENLEIQLDNLNT-NYQDKI 756
+ DID L L S KE ++K LD++K + + ++ N+ T + +
Sbjct: 665 LSKIYEDDIDALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHL 724
Query: 757 NTLIQSKNDLEAKISELNNAQHNKNNEINDLNKRISLFEENNAFLQRSILDLERNLDEKL 816
+ + KN+L I E+ H + N DLNK + F+ L I D + DE
Sbjct: 725 SNIENKKNELLDIIVEIKKHIHGEIN--KDLNKILEDFKNKEKELSNKINDYAKEKDELN 782
Query: 817 K---EFNEKEISYNENIEASNHKIQQLTQETDTLKAEL----VAQAESTQLVKQEQALLA 869
K + +E + YN+ I N K + Q D K + + + E +++ + + +
Sbjct: 783 KYKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKD 842
Query: 870 A--APVDDNIVIENQQLKQNLESVKQENTLVVENLQNLIAQKDYEINAKVTELSIIMEKC 927
VD I EN K+ ++S ++ + ++ I+ +K
Sbjct: 843 DFLNKVDKFINFENNC-KEKIDSEHEQFAELTNKIKAEISD----------------DKL 885
Query: 928 KQYEDKCIELESTLDAKLTDFSTKEQLNKNKMAELSAMLESVQAENISIKQMNEELQALT 987
YE K + +S ++ ++ +E N N + ++ ++ + SI++ + + L
Sbjct: 886 NDYEKKFNDSKSLIN-EINKSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNILK 944
Query: 988 ETLKQTSNTHEEDRKILDEYKQRVQELDAKLAEEIASKTSIIQTLEIQVKELQDKLRSYT 1047
E L + +T +E I YK + + I L+ K+ L Y
Sbjct: 945 EILNKNIDTIKESNLIEKSYKDKFDN----------TLIDKINELDKAFKDAS--LNDYE 992
Query: 1048 HVENELGQY 1056
NEL +Y
Sbjct: 993 AKNNELIKY 1001
>gnl|CDD|218216 pfam04699, P16-Arc, ARP2/3 complex 16 kDa subunit (p16-Arc). The
Arp2/3 protein complex has been implicated in the control
of actin polymerisation. The human complex consists of
seven subunits which include the actin related proteins
Arp2 and Arp3, and five others referred to as p41-Arc,
p34-Arc, p21-Arc, p20-Arc, and p16-Arc. The precise
function of p16-Arc is currently unknown. Its structure
consists of a single domain containing a bundle of seven
alpha helices.
Length = 152
Score = 29.5 bits (67), Expect = 9.9
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 1573 REAEERVKSSATAYTSASVRSNQQVEALTSQVKSLTEQKEKLQEKLYQAEDVVQKHQASL 1632
+E + + ++ QQV +L S + L Y +D K QA
Sbjct: 18 DLDKEDLPDTPEVSSADIGPDEQQVRSLLSSGDFEGALQLALSNPPYGTDDQAVKDQA-- 75
Query: 1633 TNLQIVLEQFQAEKDNEIAQSLEFL 1657
LQ VLE + K +I +++ L
Sbjct: 76 --LQTVLEVLTSIKSADIENAVKSL 98
>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional.
Length = 493
Score = 30.6 bits (69), Expect = 10.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 1398 TKHTESNNYHQEILRLNGILSEELPKLKDLGGQVATLEKQLKTTSETLATKERQLAETKE 1457
+KH + + GIL E L +L+ L ++ T +++K E L KE + ET E
Sbjct: 430 SKHADPCAMGVK-RMDEGILDERLGRLQALSEKLRTQHEEIKRCREALQKKESIVMETLE 488
Query: 1458 QL 1459
++
Sbjct: 489 KI 490
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.304 0.122 0.309
Gapped
Lambda K H
0.267 0.0724 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 88,915,147
Number of extensions: 9008049
Number of successful extensions: 25134
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17763
Number of HSP's successfully gapped: 3466
Length of query: 1857
Length of database: 10,937,602
Length adjustment: 111
Effective length of query: 1746
Effective length of database: 6,014,308
Effective search space: 10500981768
Effective search space used: 10500981768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 66 (29.2 bits)