Query psy1099
Match_columns 605
No_of_seqs 324 out of 2552
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 15:22:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3.9E-64 1.3E-68 541.9 29.9 242 357-601 222-484 (490)
2 3ros_A NAD-dependent aldehyde 100.0 1.8E-60 6E-65 513.8 31.3 240 358-601 203-459 (484)
3 3ifg_A Succinate-semialdehyde 100.0 1.1E-60 3.7E-65 516.0 27.8 238 357-598 228-482 (484)
4 3ed6_A Betaine aldehyde dehydr 100.0 2E-60 6.7E-65 517.2 29.9 241 357-601 250-511 (520)
5 3rh9_A Succinate-semialdehyde 100.0 3E-60 1E-64 514.1 29.1 242 357-602 227-486 (506)
6 2o2p_A Formyltetrahydrofolate 100.0 5.5E-60 1.9E-64 513.4 29.6 240 357-599 258-516 (517)
7 3u4j_A NAD-dependent aldehyde 100.0 5.5E-60 1.9E-64 514.7 29.6 240 357-600 241-498 (528)
8 3ek1_A Aldehyde dehydrogenase; 100.0 2.7E-60 9.2E-65 514.3 26.9 239 357-601 248-503 (504)
9 3iwj_A Putative aminoaldehyde 100.0 8.4E-60 2.9E-64 511.9 30.5 240 357-600 231-489 (503)
10 3i44_A Aldehyde dehydrogenase; 100.0 9.2E-60 3.2E-64 509.8 30.0 237 357-598 241-496 (497)
11 1bxs_A Aldehyde dehydrogenase; 100.0 8.9E-60 3E-64 510.4 29.2 241 357-600 239-496 (501)
12 1o04_A Aldehyde dehydrogenase, 100.0 6.6E-60 2.3E-64 511.3 27.1 242 357-601 238-496 (500)
13 4f3x_A Putative aldehyde dehyd 100.0 7.8E-60 2.7E-64 510.5 27.2 238 358-599 241-496 (498)
14 3k2w_A Betaine-aldehyde dehydr 100.0 7.9E-60 2.7E-64 511.3 27.2 240 357-600 228-488 (497)
15 2imp_A Lactaldehyde dehydrogen 100.0 3.8E-59 1.3E-63 504.7 30.9 238 358-599 223-478 (479)
16 3b4w_A Aldehyde dehydrogenase; 100.0 2.6E-59 9E-64 506.5 29.0 240 357-600 225-482 (495)
17 3jz4_A Succinate-semialdehyde 100.0 4.8E-59 1.6E-63 504.2 30.5 238 358-599 226-480 (481)
18 2d4e_A 5-carboxymethyl-2-hydro 100.0 5.3E-59 1.8E-63 506.5 30.8 239 357-600 242-505 (515)
19 4e4g_A Methylmalonate-semialde 100.0 1.5E-59 5.3E-64 510.3 26.3 241 357-601 241-506 (521)
20 1a4s_A ALDH, betaine aldehyde 100.0 4.6E-59 1.6E-63 505.6 29.3 240 357-600 234-496 (503)
21 3r31_A BADH, betaine aldehyde 100.0 1.5E-59 5.3E-64 509.9 25.0 240 358-601 230-489 (517)
22 3qan_A 1-pyrroline-5-carboxyla 100.0 4E-59 1.4E-63 508.9 27.8 239 358-601 253-517 (538)
23 1wnd_A Putative betaine aldehy 100.0 7.6E-59 2.6E-63 502.4 29.6 237 358-599 239-494 (495)
24 3prl_A NADP-dependent glyceral 100.0 5.4E-59 1.8E-63 504.8 28.4 235 357-601 232-484 (505)
25 3etf_A Putative succinate-semi 100.0 8.2E-59 2.8E-63 500.7 29.0 238 359-600 207-461 (462)
26 2ve5_A BADH, betaine aldehyde 100.0 2.3E-58 7.8E-63 500.4 30.2 240 357-600 222-483 (490)
27 3pqa_A Lactaldehyde dehydrogen 100.0 1.6E-58 5.5E-63 498.8 27.9 235 357-602 214-466 (486)
28 3sza_A Aldehyde dehydrogenase, 100.0 4.7E-58 1.6E-62 493.5 28.8 232 359-601 199-449 (469)
29 2w8n_A Succinate-semialdehyde 100.0 2E-58 6.9E-63 499.1 24.3 239 357-600 229-486 (487)
30 3r64_A NAD dependent benzaldeh 100.0 1.3E-57 4.3E-62 495.4 29.9 238 358-602 230-487 (508)
31 4h7n_A Aldehyde dehydrogenase; 100.0 1.1E-57 3.8E-62 492.6 27.8 239 359-601 205-464 (474)
32 2j6l_A Aldehyde dehydrogenase 100.0 6.7E-58 2.3E-62 496.6 25.9 239 357-599 240-498 (500)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.2E-57 4.2E-62 496.4 26.8 238 357-599 253-515 (516)
34 3ty7_A Putative aldehyde dehyd 100.0 5.3E-58 1.8E-62 496.1 23.6 237 358-598 220-475 (478)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.2E-57 4.2E-62 494.2 26.1 235 357-600 236-492 (501)
36 1euh_A NADP dependent non phos 100.0 2E-57 6.7E-62 490.8 27.3 233 357-599 223-473 (475)
37 1t90_A MMSDH, probable methylm 100.0 2.9E-57 1E-61 490.4 28.5 238 358-600 221-480 (486)
38 4dng_A Uncharacterized aldehyd 100.0 1.9E-57 6.4E-62 492.7 26.1 237 357-600 224-478 (485)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 2E-56 6.9E-61 488.4 27.8 238 358-599 280-550 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 1.3E-55 4.4E-60 474.4 28.6 229 359-600 209-457 (457)
41 2y53_A Aldehyde dehydrogenase 100.0 9.3E-56 3.2E-60 484.0 22.4 238 359-600 231-519 (534)
42 4f9i_A Proline dehydrogenase/d 100.0 1.3E-54 4.4E-59 498.9 27.5 240 358-601 747-1011(1026)
43 3ju8_A Succinylglutamic semial 100.0 5.2E-54 1.8E-58 465.4 26.2 231 358-599 219-470 (490)
44 3haz_A Proline dehydrogenase; 100.0 4E-52 1.4E-56 477.2 26.1 237 357-601 728-988 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 1.7E-49 6E-54 433.8 20.7 226 357-598 255-516 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 2.7E-49 9.3E-54 430.5 20.3 223 357-597 222-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 5.8E-47 2E-51 406.8 11.3 205 357-600 211-440 (468)
48 1o20_A Gamma-glutamyl phosphat 100.0 1.2E-45 4.1E-50 393.1 10.1 196 357-601 208-423 (427)
49 4ghk_A Gamma-glutamyl phosphat 100.0 3.6E-45 1.2E-49 391.4 13.6 195 359-601 222-440 (444)
50 2h5g_A Delta 1-pyrroline-5-car 100.0 9.7E-45 3.3E-49 389.0 14.3 196 358-601 221-436 (463)
51 3k9d_A LMO1179 protein, aldehy 100.0 1.2E-44 4E-49 389.9 14.2 215 360-599 195-448 (464)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.1E-41 7.3E-46 363.3 11.2 203 380-599 202-448 (452)
53 2wme_A BADH, betaine aldehyde 100.0 7.7E-39 2.6E-43 344.8 20.5 259 2-366 159-483 (490)
54 3ifg_A Succinate-semialdehyde 100.0 1E-36 3.6E-41 328.8 19.1 253 2-364 165-482 (484)
55 3ros_A NAD-dependent aldehyde 100.0 1.6E-36 5.3E-41 327.1 19.8 255 2-366 140-458 (484)
56 3ed6_A Betaine aldehyde dehydr 100.0 2.8E-36 9.5E-41 327.6 20.2 259 2-366 187-510 (520)
57 3rh9_A Succinate-semialdehyde 100.0 3.3E-36 1.1E-40 325.9 20.7 256 2-366 164-484 (506)
58 3ek1_A Aldehyde dehydrogenase; 100.0 2E-36 7E-41 327.4 17.9 252 2-365 185-501 (504)
59 4f3x_A Putative aldehyde dehyd 100.0 2.8E-36 9.4E-41 326.3 17.9 253 2-365 178-496 (498)
60 3iwj_A Putative aminoaldehyde 100.0 5.9E-36 2E-40 324.7 20.4 256 2-365 168-488 (503)
61 2o2p_A Formyltetrahydrofolate 100.0 5E-36 1.7E-40 325.4 18.7 253 2-364 195-515 (517)
62 3i44_A Aldehyde dehydrogenase; 100.0 9.9E-36 3.4E-40 321.9 20.7 254 2-363 178-495 (497)
63 3k2w_A Betaine-aldehyde dehydr 100.0 5.9E-36 2E-40 324.3 18.9 259 2-366 165-488 (497)
64 3b4w_A Aldehyde dehydrogenase; 100.0 8.5E-36 2.9E-40 322.6 19.7 255 2-366 163-482 (495)
65 3r31_A BADH, betaine aldehyde 100.0 9.4E-36 3.2E-40 323.2 19.7 258 2-366 167-488 (517)
66 3u4j_A NAD-dependent aldehyde 100.0 8.7E-36 3E-40 324.3 19.4 254 2-365 178-497 (528)
67 3jz4_A Succinate-semialdehyde 100.0 1.2E-35 3.9E-40 321.3 20.2 253 2-364 162-479 (481)
68 1wnd_A Putative betaine aldehy 100.0 1.3E-35 4.3E-40 320.9 20.3 252 2-364 176-493 (495)
69 1bxs_A Aldehyde dehydrogenase; 100.0 1.1E-35 3.7E-40 321.9 19.5 254 2-365 176-495 (501)
70 1o04_A Aldehyde dehydrogenase, 100.0 1.1E-35 3.8E-40 321.7 19.4 254 2-365 175-494 (500)
71 1a4s_A ALDH, betaine aldehyde 100.0 1.4E-35 4.9E-40 321.4 20.3 260 2-366 172-496 (503)
72 3prl_A NADP-dependent glyceral 100.0 9.8E-36 3.4E-40 322.5 18.6 250 2-365 169-482 (505)
73 3etf_A Putative succinate-semi 100.0 2E-35 6.8E-40 318.3 19.9 254 2-365 143-460 (462)
74 2ve5_A BADH, betaine aldehyde 100.0 2.5E-35 8.6E-40 319.6 20.5 258 2-365 159-482 (490)
75 2imp_A Lactaldehyde dehydrogen 100.0 3.3E-35 1.1E-39 317.5 20.4 253 2-364 159-477 (479)
76 3pqa_A Lactaldehyde dehydrogen 100.0 3.2E-35 1.1E-39 317.0 18.9 249 2-365 147-463 (486)
77 2d4e_A 5-carboxymethyl-2-hydro 100.0 4.6E-35 1.6E-39 318.3 20.1 261 2-365 179-504 (515)
78 3qan_A 1-pyrroline-5-carboxyla 100.0 4.4E-35 1.5E-39 319.5 19.9 253 2-365 189-515 (538)
79 4e4g_A Methylmalonate-semialde 100.0 3.8E-35 1.3E-39 318.7 19.1 258 2-365 179-504 (521)
80 2w8n_A Succinate-semialdehyde 100.0 5.2E-35 1.8E-39 316.1 18.6 253 2-365 163-485 (487)
81 1uxt_A Glyceraldehyde-3-phosph 100.0 4.4E-35 1.5E-39 317.5 17.4 251 2-365 174-491 (501)
82 3ty7_A Putative aldehyde dehyd 100.0 7.7E-35 2.6E-39 314.8 19.3 255 2-364 156-475 (478)
83 2j6l_A Aldehyde dehydrogenase 100.0 8.9E-35 3.1E-39 315.2 18.8 254 2-365 174-498 (500)
84 4dng_A Uncharacterized aldehyd 100.0 9.2E-35 3.1E-39 314.8 17.6 251 2-365 160-477 (485)
85 3r64_A NAD dependent benzaldeh 100.0 8.6E-35 2.9E-39 316.0 17.2 251 2-365 165-484 (508)
86 3sza_A Aldehyde dehydrogenase, 100.0 9.2E-35 3.1E-39 312.4 17.1 247 2-366 137-448 (469)
87 4h7n_A Aldehyde dehydrogenase; 100.0 1.1E-34 3.6E-39 313.2 17.2 256 2-366 143-463 (474)
88 1euh_A NADP dependent non phos 100.0 1E-34 3.4E-39 313.4 17.0 250 2-365 160-473 (475)
89 4e3x_A Delta-1-pyrroline-5-car 100.0 1.5E-33 5E-38 308.0 20.5 253 2-365 217-550 (563)
90 1t90_A MMSDH, probable methylm 100.0 1.1E-33 3.7E-38 306.0 18.4 254 2-365 158-479 (486)
91 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.4E-33 4.6E-38 307.1 18.8 251 2-364 190-514 (516)
92 2y53_A Aldehyde dehydrogenase 100.0 3.9E-33 1.3E-37 305.1 18.7 260 2-366 168-519 (534)
93 3lns_A Benzaldehyde dehydrogen 100.0 9.2E-33 3.1E-37 296.7 15.4 244 2-365 147-456 (457)
94 4f9i_A Proline dehydrogenase/d 100.0 4.8E-32 1.7E-36 311.8 19.5 254 2-366 683-1010(1026)
95 3ju8_A Succinylglutamic semial 100.0 1.9E-31 6.7E-36 288.6 15.7 246 2-364 156-469 (490)
96 3haz_A Proline dehydrogenase; 100.0 3.6E-30 1.2E-34 295.7 16.5 250 2-366 666-987 (1001)
97 3v4c_A Aldehyde dehydrogenase 100.0 1.4E-28 5E-33 268.5 13.8 242 3-366 189-518 (528)
98 1ez0_A ALDH, aldehyde dehydrog 99.9 1.9E-27 6.6E-32 258.5 16.7 240 3-365 156-482 (510)
99 1vlu_A Gamma-glutamyl phosphat 99.9 1.3E-25 4.4E-30 241.0 7.0 221 2-365 141-439 (468)
100 3k9d_A LMO1179 protein, aldehy 99.9 1.1E-25 3.9E-30 242.0 5.0 238 2-365 125-448 (464)
101 2h5g_A Delta 1-pyrroline-5-car 99.9 4.9E-25 1.7E-29 236.2 4.5 261 4-366 157-435 (463)
102 4ghk_A Gamma-glutamyl phosphat 99.9 6.5E-24 2.2E-28 226.9 9.5 215 2-366 152-439 (444)
103 1o20_A Gamma-glutamyl phosphat 99.9 3.7E-24 1.3E-28 227.6 7.5 110 254-366 309-422 (427)
104 3my7_A Alcohol dehydrogenase/a 99.9 1.1E-22 3.8E-27 218.0 3.9 276 2-362 120-440 (452)
105 2fiu_A Conserved hypothetical 71.8 9.4 0.00032 30.7 6.5 61 457-537 15-76 (99)
106 1s7i_A Hypothetical protein PA 58.9 43 0.0015 28.0 8.4 73 460-538 30-108 (124)
107 3lo3_A Uncharacterized conserv 51.3 18 0.00061 28.7 4.5 61 457-537 14-75 (94)
108 3hhl_A RPA0582; alpha-beta-bar 39.7 51 0.0017 28.3 5.9 65 456-537 45-110 (143)
109 2ec4_A FAS-associated factor 1 37.2 26 0.00089 31.4 3.8 49 269-317 25-77 (178)
110 1kae_A HDH, histidinol dehydro 33.2 18 0.00062 37.0 2.2 81 273-363 303-393 (434)
111 1b4b_A Arginine repressor; cor 31.7 63 0.0022 23.9 4.5 36 12-51 12-47 (71)
112 2zfz_A Arginine repressor; DNA 30.7 68 0.0023 24.3 4.7 36 12-51 20-55 (79)
113 4gic_A HDH, histidinol dehydro 28.3 43 0.0015 34.2 4.0 78 277-363 313-400 (423)
114 1xxa_A ARGR, arginine represso 27.5 66 0.0022 24.4 4.1 37 12-51 14-50 (78)
115 2p5m_A Arginine repressor; alp 27.2 66 0.0023 24.6 4.1 36 12-51 24-59 (83)
116 3v4g_A Arginine repressor; vib 25.1 60 0.002 29.0 3.9 38 11-51 115-152 (180)
117 1kae_A HDH, histidinol dehydro 22.9 31 0.001 35.4 1.7 75 518-597 306-393 (434)
118 2fiu_A Conserved hypothetical 21.6 2.9E+02 0.0098 21.7 7.1 60 111-190 16-76 (99)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.9e-64 Score=541.89 Aligned_cols=242 Identities=41% Similarity=0.665 Sum_probs=226.2
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+++++.++++++||++||||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 222 v~~I~FTGS~---~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i 298 (490)
T 2wme_A 222 IEKISFTGGT---STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298 (490)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred CCEEEEECCh---HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhH
Confidence 3455789986 9999998877777899999999999999999999999986 56669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVT 502 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~ 502 (605)
+|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||+... ..|+|++|||+.+++
T Consensus 299 ~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~ 378 (490)
T 2wme_A 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCR 378 (490)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCC
T ss_pred HHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCC
Confidence 9999999999999999999999999999999999999999999999999999999997643 368999999999999
Q ss_pred CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCC
Q psy1099 503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKE 575 (605)
Q Consensus 503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~ 575 (605)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.++ .+.+||||+|.
T Consensus 379 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~ 458 (490)
T 2wme_A 379 DDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQ 458 (490)
T ss_dssp TTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGG
T ss_pred CCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999843 35689999999
Q ss_pred CCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099 576 SGIGRELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 576 SG~G~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
||+|+++|++++++||+.|+|+++..
T Consensus 459 SG~Gre~G~~gl~~ft~~K~v~i~~g 484 (490)
T 2wme_A 459 SGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp GEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred cccCchhHHHHHHHhhceeEEEEECC
Confidence 99999999999999999999997653
No 2
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.8e-60 Score=513.81 Aligned_cols=240 Identities=27% Similarity=0.450 Sum_probs=225.4
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
...+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 203 d~I~fTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 278 (484)
T 3ros_A 203 QGVALTGSE---RGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRY 278 (484)
T ss_dssp EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGH
T ss_pred CEEEEECCH---HHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHH
Confidence 344789985 999999988886 999999999999999999999999997 455599999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~ 507 (605)
|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus 279 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i 358 (484)
T 3ros_A 279 DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPV 358 (484)
T ss_dssp HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTT
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999865568999999999999999999
Q ss_pred cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR 580 (605)
Q Consensus 508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~ 580 (605)
++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|++++ +.+||||+|+||+|+
T Consensus 359 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr 438 (484)
T 3ros_A 359 FDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGR 438 (484)
T ss_dssp TTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESC
T ss_pred cccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCc
Confidence 9999999999999999999999999999999999999999999999999999999443 458999999999999
Q ss_pred hhHHHHHHHhhhceEEEEcCC
Q psy1099 581 ELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 581 ~~g~~~~~~~~~~k~v~~~~~ 601 (605)
++|++++++||+.|+|+.+..
T Consensus 439 ~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 439 ELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp BSHHHHHTTTCEEEEEEECGG
T ss_pred CchHHHHHHhheeEEEEECCC
Confidence 999999999999999987643
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.1e-60 Score=515.97 Aligned_cols=238 Identities=33% Similarity=0.543 Sum_probs=223.8
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 228 v~~v~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 303 (484)
T 3ifg_A 228 VRKLSFTGST---AVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERV 303 (484)
T ss_dssp CCEEEEESCH---HHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGG
T ss_pred cCEEEEECCH---HHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHH
Confidence 3445789985 999999988876 999999999999999999999999986 46669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|+
T Consensus 304 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~ 383 (484)
T 3ifg_A 304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMD 383 (484)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999986555799999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+++ .+.+||||+|+||+|
T Consensus 384 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G 463 (484)
T 3ifg_A 384 VAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLG 463 (484)
T ss_dssp GGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEEC
T ss_pred hhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999843 346899999999999
Q ss_pred ChhHHHHHHHhhhceEEEE
Q psy1099 580 RELGKAALDEYTELKTVTE 598 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~ 598 (605)
+++|++++++||+.|+|+.
T Consensus 464 r~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 464 REGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp CBSTTTTTGGGEEEEEEEE
T ss_pred CCchHHHHHHhhceEEEEE
Confidence 9999999999999999976
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2e-60 Score=517.24 Aligned_cols=241 Identities=38% Similarity=0.642 Sum_probs=225.3
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
....+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 250 vd~V~FTGS~---~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 325 (520)
T 3ed6_A 250 VDLVSFTGGI---ETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSI 325 (520)
T ss_dssp CSEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHH
T ss_pred cCEEEEECCH---HHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHH
Confidence 3445789985 999999988876 999999999999999999999999986 46669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVT 502 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~~ 502 (605)
+|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||+... ..|+|++|||+.+++
T Consensus 326 ~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~ 405 (520)
T 3ed6_A 326 KDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405 (520)
T ss_dssp HHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999997642 479999999999999
Q ss_pred CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099 503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE 575 (605)
Q Consensus 503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~ 575 (605)
++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|++++ +.+||||+|.
T Consensus 406 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~ 485 (520)
T 3ed6_A 406 TSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQ 485 (520)
T ss_dssp TTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGG
T ss_pred CCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCc
Confidence 999999999999999999999999999999999999999999999999999999999998433 5689999999
Q ss_pred CCCCChhHHHHHHHhhhceEEEEcCC
Q psy1099 576 SGIGRELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 576 SG~G~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
||+|+++|++++++||+.|+|+.+..
T Consensus 486 SG~Gre~G~~gl~~~t~~k~v~~~~~ 511 (520)
T 3ed6_A 486 SGIGRELGKEGLEEYLVSKHILTNTN 511 (520)
T ss_dssp GEESCBSHHHHHHTTEEEEEEEEESS
T ss_pred CcCCccchHHHHHHhhceEEEEEcCC
Confidence 99999999999999999999987653
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3e-60 Score=514.11 Aligned_cols=242 Identities=33% Similarity=0.541 Sum_probs=224.1
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 227 vd~I~FTGS~---~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 302 (506)
T 3rh9_A 227 VPMLSFTGST---EVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKV 302 (506)
T ss_dssp CCEEEEESCH---HHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTT
T ss_pred CCEEEEECCH---HHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHH
Confidence 3445789985 999999888775 999999999999999999999999986 45569999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCeeEeeEEeecCCCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~-~g~~~~Pti~~~~~~~~ 505 (605)
+|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|
T Consensus 303 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~ 382 (506)
T 3rh9_A 303 ADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREM 382 (506)
T ss_dssp HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTS
T ss_pred HHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999976444 79999999999999999
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI 578 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~ 578 (605)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|++.+ +.+||||+|.||+
T Consensus 383 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~ 462 (506)
T 3rh9_A 383 CCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGI 462 (506)
T ss_dssp HHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEE
T ss_pred hhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcC
Confidence 999999999999999999999999999999999999999999999999999999998443 3479999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcCCC
Q psy1099 579 GRELGKAALDEYTELKTVTESPLR 602 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~~~ 602 (605)
|+++|++++++||+.|+|+.+...
T Consensus 463 G~~~G~~gl~~ft~~K~v~~~~~~ 486 (506)
T 3rh9_A 463 GREGGLEGLFEFVEAQTVPRGFAE 486 (506)
T ss_dssp SCBSHHHHHTTTEEEEEEEEC---
T ss_pred CcCccHHHHHHhcceEEEEEcCcc
Confidence 999999999999999999876543
No 6
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=5.5e-60 Score=513.41 Aligned_cols=240 Identities=43% Similarity=0.715 Sum_probs=224.1
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++.+++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 258 v~~V~FTGS~---~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i 334 (517)
T 2o2p_A 258 VRKIGFTGST---EVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESI 334 (517)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH
T ss_pred CCEEEEECCH---HHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHH
Confidence 4455789985 9999999888723999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus 335 ~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 414 (517)
T 2o2p_A 335 HNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMY 414 (517)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999976444699999999999999999
Q ss_pred ccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG 577 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG 577 (605)
+++||+||||++|++|+| ++|||+++|+++|||+++|||+|.++++++++++++|.+++ +.+||||+|+||
T Consensus 415 i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG 494 (517)
T 2o2p_A 415 IAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSG 494 (517)
T ss_dssp GGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGE
T ss_pred hhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCC
Confidence 999999999999999999 99999999999999999999999999999999999998433 468999999999
Q ss_pred CCChhHHHHHHHhhhceEEEEc
Q psy1099 578 IGRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~~ 599 (605)
+|+++|.+++++||+.|+|+.+
T Consensus 495 ~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 495 FGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp ECCBSHHHHHHTTEEEEEEEEE
T ss_pred cCccChHHHHHHhCCceEEEee
Confidence 9999999999999999999864
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.5e-60 Score=514.65 Aligned_cols=240 Identities=39% Similarity=0.647 Sum_probs=224.8
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
....+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 241 vd~I~FTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 316 (528)
T 3u4j_A 241 VDMVAFTGSV---RVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGI 316 (528)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGG
T ss_pred cCEEEEeCCH---HHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechH
Confidence 3445789985 999999988776 999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCeeEeeEEeecCCCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~-~g~~~~Pti~~~~~~~~ 505 (605)
+|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||..... .|+|++|||+.+++++|
T Consensus 317 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~ 396 (528)
T 3u4j_A 317 RDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDM 396 (528)
T ss_dssp HHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999986543 79999999999999999
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGI 578 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~ 578 (605)
++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|++. .+.+||||+|+||+
T Consensus 397 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~ 476 (528)
T 3u4j_A 397 SIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGL 476 (528)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEE
T ss_pred ccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999843 34579999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcC
Q psy1099 579 GRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+++|++++++||+.|+|+.+.
T Consensus 477 Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 477 GRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp SCBSTTHHHHHTEEEEEEEEES
T ss_pred CcCchHHHHHHhhceEEEEEeC
Confidence 9999999999999999998764
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.7e-60 Score=514.30 Aligned_cols=239 Identities=38% Similarity=0.583 Sum_probs=224.2
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
....+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 248 v~~V~FTGS~---~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 323 (504)
T 3ek1_A 248 VRKLSFTGST---EVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGV 323 (504)
T ss_dssp CCEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHH
T ss_pred cCEEEEECCH---HHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhH
Confidence 3445789986 999999988876 999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|+++++++++|+|.++.+++||++++.+++++++++++++++|+++++||+. ..|+|++|||+.+++++|+
T Consensus 324 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~ 401 (504)
T 3ek1_A 324 YDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDML 401 (504)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcCh
Confidence 99999999999999999999999999999999999999999999999999999999976 3699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++++ +.+||||+|+||+|
T Consensus 402 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G 481 (504)
T 3ek1_A 402 VAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLG 481 (504)
T ss_dssp GGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEES
T ss_pred hhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCC
Confidence 99999999999999999999999999999999999999999999999999999998433 45799999999999
Q ss_pred ChhHHHHHHHhhhceEEEEcCC
Q psy1099 580 RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+++|++++++||+.|+|+.+..
T Consensus 482 r~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 482 REGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp CBSTTTSGGGGEEEEEEEEECC
T ss_pred CCCcHHHHHHhhceEEEEEecC
Confidence 9999999999999999988654
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=8.4e-60 Score=511.89 Aligned_cols=240 Identities=40% Similarity=0.648 Sum_probs=224.7
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
....+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 231 v~~I~FTGS~---~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 306 (503)
T 3iwj_A 231 VDKVAFTGSS---ATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306 (503)
T ss_dssp CCEEEEESCH---HHHHHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTT
T ss_pred ccEEEEECcH---HHHHHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHH
Confidence 3445789985 999999988776 999999999999999999999999986 45569999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~ 504 (605)
+|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.+++++
T Consensus 307 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~ 386 (503)
T 3iwj_A 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTN 386 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997644 57999999999999999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG 577 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG 577 (605)
|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|++++ +.+||||+|.||
T Consensus 387 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG 466 (503)
T 3iwj_A 387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSG 466 (503)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGE
T ss_pred chhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCccc
Confidence 9999999999999999999999999999999999999999999999999999999998433 458999999999
Q ss_pred CCChhHHHHHHHhhhceEEEEcC
Q psy1099 578 IGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
+|+++|.+++++||+.|+|+.+.
T Consensus 467 ~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 467 FGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp ECCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCcchHHHHHHhhCeEEEEEeC
Confidence 99999999999999999998753
No 10
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=9.2e-60 Score=509.80 Aligned_cols=237 Identities=36% Similarity=0.550 Sum_probs=220.4
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++||| +.|+ .|+.|++++|+|||+++
T Consensus 241 v~~I~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 315 (497)
T 3i44_A 241 LEMISFTGST---RAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAI 315 (497)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred cCEEEEeCcH---HHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHH
Confidence 3445789985 999999988876 9999999999999999999999 9886 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCc-ccC--CCCeeEeeEEeecCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK-RKG--DKGYFIEPTVFSNVTD 503 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~-~~~--~~g~~~~Pti~~~~~~ 503 (605)
+|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||. ... ..|+|++|||+.++++
T Consensus 316 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~ 395 (497)
T 3i44_A 316 YDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKP 395 (497)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999999994 322 2699999999999999
Q ss_pred CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCC
Q psy1099 504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESG 577 (605)
Q Consensus 504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG 577 (605)
+|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++ +.+||||+|.||
T Consensus 396 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~PfGG~k~SG 475 (497)
T 3i44_A 396 HMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSG 475 (497)
T ss_dssp TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTCCCCTTCCBCCSGGGC
T ss_pred CCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999998443 457999999999
Q ss_pred CCChhHHHHHHHhhhceEEEE
Q psy1099 578 IGRELGKAALDEYTELKTVTE 598 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~ 598 (605)
+|+++|++++++||+.|+|+.
T Consensus 476 ~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 476 RAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp CCCBSHHHHHHTTEEEEEESC
T ss_pred CCccchHHHHHHhcceeEEEe
Confidence 999999999999999999863
No 11
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=8.9e-60 Score=510.41 Aligned_cols=241 Identities=54% Similarity=0.838 Sum_probs=224.4
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++.+++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 239 v~~I~FTGS~---~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 315 (501)
T 1bxs_A 239 VDKVAFTGST---EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315 (501)
T ss_dssp CSEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHH
T ss_pred cCEEEEECCH---HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhH
Confidence 3444789985 9999999888834999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus 316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 395 (501)
T 1bxs_A 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMR 395 (501)
T ss_dssp HHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999976444699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+++ +.+||||+|.||+|
T Consensus 396 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G 475 (501)
T 1bxs_A 396 IAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNG 475 (501)
T ss_dssp HHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEES
T ss_pred HHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999998332 46899999999999
Q ss_pred ChhHHHHHHHhhhceEEEEcC
Q psy1099 580 RELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~~ 600 (605)
+++|.+++++|++.|+|+.+.
T Consensus 476 ~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 476 RELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp CBSHHHHHHTTEEEEEEEEEC
T ss_pred ccchHHHHHHhhCeeEEEEcc
Confidence 999999999999999998753
No 12
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=6.6e-60 Score=511.28 Aligned_cols=242 Identities=53% Similarity=0.857 Sum_probs=225.1
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++.+++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 238 v~~I~FTGS~---~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 314 (500)
T 1o04_A 238 VDKVAFTGST---EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI 314 (500)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH
T ss_pred cCEEEEECCH---HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhH
Confidence 3445789985 9999999888834999999999999999999999999986 46669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus 315 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 394 (500)
T 1o04_A 315 YDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMT 394 (500)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999976434699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++ +.+||||+|.||+|
T Consensus 395 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G 474 (500)
T 1o04_A 395 IAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSG 474 (500)
T ss_dssp HHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEES
T ss_pred hhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998432 46899999999999
Q ss_pred ChhHHHHHHHhhhceEEEEcCC
Q psy1099 580 RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+++|.+++++|++.|+|+.+..
T Consensus 475 ~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 475 RELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp CBSTGGGGGGGEEEEEEEEECS
T ss_pred ccchHHHHHHhcceEEEEEecC
Confidence 9999999999999999987643
No 13
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=7.8e-60 Score=510.49 Aligned_cols=238 Identities=30% Similarity=0.545 Sum_probs=223.9
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
...+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 241 ~~V~FTGS~---~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 316 (498)
T 4f3x_A 241 GMVSITGDI---ATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY 316 (498)
T ss_dssp CEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTH
T ss_pred CEEEEECCH---HHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHH
Confidence 344789985 999999988876 999999999999999999999999986 455699999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCC-eEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~-~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
|+|+++|+++++++++|+|.++.+++||++++.+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|+
T Consensus 317 d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~ 396 (498)
T 4f3x_A 317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDE 396 (498)
T ss_dssp HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCCh
Confidence 99999999999999999999999999999999999999999999999999 99999986556899999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|++++ +.+||||+|+||+|
T Consensus 397 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G 476 (498)
T 4f3x_A 397 IVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYG 476 (498)
T ss_dssp HHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEEC
T ss_pred hhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999998433 56799999999999
Q ss_pred ChhHHHHHHHhhhceEEEEc
Q psy1099 580 RELGKAALDEYTELKTVTES 599 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~ 599 (605)
+++|.+++++||+.|+|+.+
T Consensus 477 r~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 477 KDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp CBSHHHHHHHTEEEEEEEEE
T ss_pred ccchHHHHHHhhceEEEEEe
Confidence 99999999999999999875
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=7.9e-60 Score=511.35 Aligned_cols=240 Identities=33% Similarity=0.540 Sum_probs=221.6
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 228 vd~I~fTGS~---~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 303 (497)
T 3k2w_A 228 TKMITMTGST---VAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASV 303 (497)
T ss_dssp EEEEEEESCH---HHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTT
T ss_pred cCEEEEECcH---HHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHH
Confidence 3444789985 999999988876 999999999999999999999999986 45569999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcc--cCC--CCeeEeeEEeecCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGD--KGYFIEPTVFSNVT 502 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~--~~~--~g~~~~Pti~~~~~ 502 (605)
+|+|+++|++++.++++|+|.++.+++||++++.+++++.+++++++++|+++++||+. .+. .|+|++|||+.+++
T Consensus 304 ~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~ 383 (497)
T 3k2w_A 304 YDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVK 383 (497)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999973 222 69999999999999
Q ss_pred CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCC
Q psy1099 503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKE 575 (605)
Q Consensus 503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~ 575 (605)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|++++ +.+||||+|+
T Consensus 384 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~ 463 (497)
T 3k2w_A 384 QDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQ 463 (497)
T ss_dssp TTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEET
T ss_pred CCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999998433 4589999999
Q ss_pred CCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 576 SGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 576 SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
||+|+++|++++++||+.|+|+.+.
T Consensus 464 SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 464 SGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp SEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CcCCccchHHHHHHhcceEEEEEEc
Confidence 9999999999999999999998754
No 15
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=3.8e-59 Score=504.75 Aligned_cols=238 Identities=35% Similarity=0.596 Sum_probs=222.1
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
+..+|||++ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 223 ~~V~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~ 298 (479)
T 2imp_A 223 AMVSMTGSV---SAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIY 298 (479)
T ss_dssp EEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGH
T ss_pred CEEEEeCCH---HHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhH
Confidence 344688885 999999988875 999999999999999999999999997 345599999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCC-CCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 428 DTFVKKAVEKAAARKVGDPFD-KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
|+|+++|.+++.++++|+|.+ +++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus 299 d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~ 378 (479)
T 2imp_A 299 DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMS 378 (479)
T ss_dssp HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCH
Confidence 999999999999999999999 9999999999999999999999999999999999975334699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGIG 579 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~G 579 (605)
+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+. .+.+||||+|.||+|
T Consensus 379 ~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G 458 (479)
T 2imp_A 379 IMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIG 458 (479)
T ss_dssp GGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEES
T ss_pred HHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999833 256899999999999
Q ss_pred ChhHHHHHHHhhhceEEEEc
Q psy1099 580 RELGKAALDEYTELKTVTES 599 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~ 599 (605)
+++|++++++||+.|+|+.+
T Consensus 459 ~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 459 GADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CBSHHHHHHTTEEEEEEEEE
T ss_pred CCchHHHHHHhcCeeEEEec
Confidence 99999999999999999874
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-59 Score=506.53 Aligned_cols=240 Identities=38% Similarity=0.596 Sum_probs=223.9
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 225 v~~I~FTGS~---~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 300 (495)
T 3b4w_A 225 IDMFTFTGSS---AVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300 (495)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGG
T ss_pred cCEEEEeCCH---HHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccH
Confidence 3445789985 999999988876 999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCeeEeeEEeecCCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--DKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--~~g~~~~Pti~~~~~~~ 504 (605)
+|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||+... ..|+|++|||+.+++++
T Consensus 301 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~ 380 (495)
T 3b4w_A 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNK 380 (495)
T ss_dssp HHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997643 36999999999999999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGI 578 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG~ 578 (605)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++ +.+||||+|.||+
T Consensus 381 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~PfGG~k~SG~ 460 (495)
T 3b4w_A 381 MTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPGSPFGGYKNSGI 460 (495)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCCCCTTSCBCCSGGGEE
T ss_pred ChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999433 4689999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcC
Q psy1099 579 GRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+++|++++++||+.|+|+.+.
T Consensus 461 Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 461 GRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp SCBSHHHHHHTTEEEEEEECCT
T ss_pred CccchHHHHHHhcceeEEEEcc
Confidence 9999999999999999998753
No 17
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=4.8e-59 Score=504.15 Aligned_cols=238 Identities=34% Similarity=0.590 Sum_probs=223.4
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
+...||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 226 ~~I~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 301 (481)
T 3jz4_A 226 RKLSFTGST---EIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 301 (481)
T ss_dssp EEEEEESCH---HHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGH
T ss_pred CEEEEECCH---HHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHH
Confidence 344689985 999999988876 999999999999999999999999986 466699999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~ 507 (605)
|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|++
T Consensus 302 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i 381 (481)
T 3jz4_A 302 DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKV 381 (481)
T ss_dssp HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGG
T ss_pred HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999765456899999999999999999
Q ss_pred cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCC
Q psy1099 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGR 580 (605)
Q Consensus 508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~ 580 (605)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.+++ +.+||||+|+||+|+
T Consensus 382 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~ 461 (481)
T 3jz4_A 382 SKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGR 461 (481)
T ss_dssp GTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESC
T ss_pred ccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCC
Confidence 9999999999999999999999999999999999999999999999999999998433 468999999999999
Q ss_pred hhHHHHHHHhhhceEEEEc
Q psy1099 581 ELGKAALDEYTELKTVTES 599 (605)
Q Consensus 581 ~~g~~~~~~~~~~k~v~~~ 599 (605)
++|++++++||+.|+|+..
T Consensus 462 ~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 462 EGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp BSHHHHHHTTEEEEEEEEE
T ss_pred CchHHHHHHhhceeEEEEe
Confidence 9999999999999999864
No 18
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.3e-59 Score=506.50 Aligned_cols=239 Identities=43% Similarity=0.666 Sum_probs=222.6
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 242 vd~I~FTGS~---~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 317 (515)
T 2d4e_A 242 VPLLTLTGET---ETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKI 317 (515)
T ss_dssp CCEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHH
T ss_pred cCEEEEeCcH---HHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhH
Confidence 3444689885 999999988876 999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--------CCCeeEeeEEe
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG--------DKGYFIEPTVF 498 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~--------~~g~~~~Pti~ 498 (605)
+|+|+++|.++++++++|+|.++.+++||++++.+++++++++++++++|+++++||+... ..|+|++|||+
T Consensus 318 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl 397 (515)
T 2d4e_A 318 FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397 (515)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEE
T ss_pred HHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999997643 26999999999
Q ss_pred ecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc
Q psy1099 499 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG 571 (605)
Q Consensus 499 ~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG 571 (605)
.+ +++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++++ +.+|||
T Consensus 398 ~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfG 476 (515)
T 2d4e_A 398 VG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFG 476 (515)
T ss_dssp EC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBC
T ss_pred eC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCC
Confidence 99 9999999999999999999999999999999999999999999999999999999999998432 468999
Q ss_pred ccCCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 572 GFKESGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 572 G~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+|+||+|+++|++++++||+.|+|+.+.
T Consensus 477 G~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 477 GVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp CSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 99999999999999999999999998753
No 19
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-59 Score=510.34 Aligned_cols=241 Identities=29% Similarity=0.394 Sum_probs=224.0
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc-
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED- 425 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~- 425 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++
T Consensus 241 vd~I~FTGS~---~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~ 316 (521)
T 4e4g_A 241 IAAVSFVGST---PIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEE 316 (521)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHH
T ss_pred cCEEEEECCH---HHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCch
Confidence 3445789985 999999988876 999999999999999999999999986 4666999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCeeEeeEEeecC
Q psy1099 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNV 501 (605)
Q Consensus 426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~----~~~g~~~~Pti~~~~ 501 (605)
++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... ...|+|++|||+.++
T Consensus 317 i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v 396 (521)
T 4e4g_A 317 TANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396 (521)
T ss_dssp HHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESC
T ss_pred HHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999642 247999999999999
Q ss_pred CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCccccc
Q psy1099 502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGF 573 (605)
Q Consensus 502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~ 573 (605)
+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.++ .+.+||||+
T Consensus 397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~ 476 (521)
T 4e4g_A 397 TPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGW 476 (521)
T ss_dssp CTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCE
T ss_pred CCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999832 245899999
Q ss_pred CCCCCC--ChhHHHHHHHhhhceEEEEcCC
Q psy1099 574 KESGIG--RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 574 ~~SG~G--~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
|.||+| +++|++++++||+.|+|+.+..
T Consensus 477 k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 477 KSSSFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp ETTEESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred ccCCCCCCccchHHHHHHhheEEEEEEecC
Confidence 999999 7999999999999999998643
No 20
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.6e-59 Score=505.59 Aligned_cols=240 Identities=38% Similarity=0.655 Sum_probs=223.5
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 234 v~~V~FTGS~---~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 309 (503)
T 1a4s_A 234 VAKVSFTGSV---PTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309 (503)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGG
T ss_pred cCEEEEeCCH---HHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHH
Confidence 3445789985 999999988875 999999999999999999999999997 45559999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C----CCCeeEeeEEeec
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK--G----DKGYFIEPTVFSN 500 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~--~----~~g~~~~Pti~~~ 500 (605)
+|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+.. + ..|+|++|||+.+
T Consensus 310 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~ 389 (503)
T 1a4s_A 310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN 389 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEES
T ss_pred HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEec
Confidence 999999999999999999999999999999999999999999999999999999999764 2 3699999999999
Q ss_pred CCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccccc
Q psy1099 501 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGF 573 (605)
Q Consensus 501 ~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~ 573 (605)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.+++ +.+||||+
T Consensus 390 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~ 469 (503)
T 1a4s_A 390 CRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGY 469 (503)
T ss_dssp CCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCS
T ss_pred CCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998432 46899999
Q ss_pred CCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 574 KESGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 574 ~~SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+||+|+++|++++++||+.|+|+.+.
T Consensus 470 k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 470 KMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp GGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999999999998764
No 21
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.5e-59 Score=509.89 Aligned_cols=240 Identities=41% Similarity=0.664 Sum_probs=222.6
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h------cccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y------YCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~------~~~c~a~~~v~v~~~~~ 427 (605)
+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ + |+.|++++|+|||++++
T Consensus 230 d~I~FTGS~---~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~ 305 (517)
T 3r31_A 230 AKVSLTGSV---PTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK 305 (517)
T ss_dssp EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGH
T ss_pred CEEeccCCH---HHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHH
Confidence 344789985 999999988876 999999999999999999999999997 3 33499999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCeeEeeEEeecCCCC
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~---~~g~~~~Pti~~~~~~~ 504 (605)
|+|+++|++++.++++|+|.++.+++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.+++++
T Consensus 306 d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~ 385 (517)
T 3r31_A 306 ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDD 385 (517)
T ss_dssp HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTT
T ss_pred HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999993121 37999999999999999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESG 577 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG 577 (605)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++. .+.+||||+|.||
T Consensus 386 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG 465 (517)
T 3r31_A 386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSG 465 (517)
T ss_dssp SHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTE
T ss_pred CccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCC
Confidence 999999999999999999999999999999999999999999999999999999999843 3567999999999
Q ss_pred CCChhHHHHHHHhhhceEEEEcCC
Q psy1099 578 IGRELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+|+++|++++++||+.|+|+.+..
T Consensus 466 ~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 466 FGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp ECCBSTGGGGGGSEEEEEEEECCC
T ss_pred CCcCchHHHHHHhhceEEEEEcCC
Confidence 999999999999999999987653
No 22
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4e-59 Score=508.95 Aligned_cols=239 Identities=36% Similarity=0.568 Sum_probs=222.7
Q ss_pred ceeEEEecCCccccHHHHHHHHHhcc------ccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASN------LKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY 421 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~------~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~ 421 (605)
+..+||||+ .+|+.|++.++. + +||+++|||||||+||++|||++.|+ .|+.|++++|+|
T Consensus 253 ~~I~FTGS~---~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvl 328 (538)
T 3qan_A 253 SLITFTGSK---DVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAV 328 (538)
T ss_dssp EEEEEESCH---HHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEE
T ss_pred CEEEEECCH---HHHHHHHHHhhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeE
Confidence 344689985 999999988775 7 99999999999999999999999986 466699999999
Q ss_pred EecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV 501 (605)
Q Consensus 422 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~ 501 (605)
||++++|+|+++|.+++.++++|+|.++++++||++++.+++++.+++++++++| ++++||...+..|+|++|||+.++
T Consensus 329 V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v 407 (538)
T 3qan_A 329 IHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADL 407 (538)
T ss_dssp EETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESC
T ss_pred EehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecC
Confidence 9999999999999999999999999999999999999999999999999999999 999999875447999999999999
Q ss_pred CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccc
Q psy1099 502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGG 572 (605)
Q Consensus 502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG 572 (605)
+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++ .+.+||||
T Consensus 408 ~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG 487 (538)
T 3qan_A 408 DPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGG 487 (538)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCC
T ss_pred CCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999833 34579999
Q ss_pred cCCCCCC-ChhHHHHHHHhhhceEEEEcCC
Q psy1099 573 FKESGIG-RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 573 ~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+|.||+| +++|++++++||+.|+|+.+..
T Consensus 488 ~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 488 FKMSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp EETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred cCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 9999999 9999999999999999987543
No 23
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=7.6e-59 Score=502.41 Aligned_cols=237 Identities=32% Similarity=0.550 Sum_probs=221.8
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 239 d~I~FTGS~---~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 314 (495)
T 1wnd_A 239 RMVSLTGSI---ATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314 (495)
T ss_dssp EEEEEESCH---HHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred CEEEEECcH---HHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhH
Confidence 344688885 999999988876 999999999999999999999999987 455699999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcC-CeEEeCCc-ccCCCCeeEeeEEeecCCCCC
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-GKLEAGGK-RKGDKGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g-~~v~~gg~-~~~~~g~~~~Pti~~~~~~~~ 505 (605)
|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++| +++++||+ .. ..|+|++|||+.+++++|
T Consensus 315 d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~ 393 (495)
T 1wnd_A 315 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDD 393 (495)
T ss_dssp HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTS
T ss_pred HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 99999997 43 369999999999999999
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGI 578 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~ 578 (605)
++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.+++ +.+||||+|.||+
T Consensus 394 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~ 473 (495)
T 1wnd_A 394 AIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGY 473 (495)
T ss_dssp HHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEE
T ss_pred hhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999999999999999999998432 5689999999999
Q ss_pred CChhHHHHHHHhhhceEEEEc
Q psy1099 579 GRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~ 599 (605)
|+++|++++++||+.|+|+.+
T Consensus 474 Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 474 GKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp CCBSHHHHHHTTEEEEEEEEE
T ss_pred CccchHHHHHHhhCeEEEEec
Confidence 999999999999999999864
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=5.4e-59 Score=504.78 Aligned_cols=235 Identities=30% Similarity=0.445 Sum_probs=219.0
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++ +||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 232 vd~I~FTGS~---~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 305 (505)
T 3prl_A 232 IDMITFTGGT---TTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305 (505)
T ss_dssp CCEEEEESCH---HHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHH
T ss_pred CCEEEEeCCH---HHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHH
Confidence 3445789985 99999987665 89999999999999999999999986 45569999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|. +++++||++++.+++++.+++++++++|+++++||+. .|+|++|||+.+++++|+
T Consensus 306 ~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~ 381 (505)
T 3prl_A 306 ADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMR 381 (505)
T ss_dssp HHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCCh
Confidence 999999999999999999999 9999999999999999999999999999999999974 689999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI 578 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~ 578 (605)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++. .+.+||||+|.||+
T Consensus 382 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~ 461 (505)
T 3prl_A 382 VAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGL 461 (505)
T ss_dssp GGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEE
T ss_pred hhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCC
Confidence 9999999999999999999999999999999999999999999999999999999832 35689999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcCC
Q psy1099 579 GRELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
|+++|++++++||+.|+|+.+..
T Consensus 462 Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 462 GVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp SCBSHHHHHHHTEEEEEEEEEC-
T ss_pred CcCccHHHHHHhhceEEEEEeCC
Confidence 99999999999999999987543
No 25
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=8.2e-59 Score=500.71 Aligned_cols=238 Identities=33% Similarity=0.529 Sum_probs=225.1
Q ss_pred eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++|
T Consensus 207 ~v~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d 282 (462)
T 3etf_A 207 AVTVTGSV---RAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQ 282 (462)
T ss_dssp EEEEESCH---HHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHH
T ss_pred EEEEeCCc---hHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHH
Confidence 34688986 999999988886 999999999999999999999999986 4566999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA 508 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~ 508 (605)
+|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus 283 ~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~ 362 (462)
T 3etf_A 283 AFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAF 362 (462)
T ss_dssp HHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999998655689999999999999999999
Q ss_pred ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCCCh
Q psy1099 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRE 581 (605)
Q Consensus 509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G~~ 581 (605)
+||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++++ +.+||||+|.||+|++
T Consensus 363 ~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~ 442 (462)
T 3etf_A 363 RQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRE 442 (462)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCB
T ss_pred cCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999443 4689999999999999
Q ss_pred hHHHHHHHhhhceEEEEcC
Q psy1099 582 LGKAALDEYTELKTVTESP 600 (605)
Q Consensus 582 ~g~~~~~~~~~~k~v~~~~ 600 (605)
+|++++++||+.|+|+.++
T Consensus 443 ~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 443 LSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SHHHHHHTTEEEEEEEECC
T ss_pred chHHHHHHHhceeEEEEec
Confidence 9999999999999999875
No 26
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.3e-58 Score=500.45 Aligned_cols=240 Identities=41% Similarity=0.680 Sum_probs=223.8
Q ss_pred cceeEEEecCCccccHHHHHHHH-HhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAA-AASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED 425 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~-a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~ 425 (605)
.....||||+ .+|+.+++.+ +. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++
T Consensus 222 vd~v~fTGS~---~~g~~i~~~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 297 (490)
T 2ve5_A 222 IEKISFTGGT---STGKKVMASASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRS 297 (490)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGG
T ss_pred cCEEEEeCCc---HHHHHHHHhchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHH
Confidence 3445789885 9999999888 54 999999999999999999999999986 4556999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCeeEeeEEeecC
Q psy1099 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNV 501 (605)
Q Consensus 426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~----~~g~~~~Pti~~~~ 501 (605)
++|+|+++|.+++.++++|+|.++.+++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.++
T Consensus 298 i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v 377 (490)
T 2ve5_A 298 QQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDC 377 (490)
T ss_dssp GHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESC
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997632 36899999999999
Q ss_pred CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccC
Q psy1099 502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFK 574 (605)
Q Consensus 502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~ 574 (605)
+++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+ +.+||||+|
T Consensus 378 ~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k 457 (490)
T 2ve5_A 378 RDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYK 457 (490)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSG
T ss_pred CCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998443 468999999
Q ss_pred CCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 575 ESGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 575 ~SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
.||+|+++|.+++++||+.|+|+.+.
T Consensus 458 ~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 458 QSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp GGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCCCcchHHHHHHhheeEEEEEcc
Confidence 99999999999999999999998754
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.6e-58 Score=498.78 Aligned_cols=235 Identities=34% Similarity=0.539 Sum_probs=217.8
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++ +||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 214 vd~V~fTGS~---~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 287 (486)
T 3pqa_A 214 VNMISFTGSS---KVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESI 287 (486)
T ss_dssp CCEEEEESCH---HHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGG
T ss_pred ccEEEEECCh---HHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHH
Confidence 3445789985 99999987664 89999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ +++++|+
T Consensus 288 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~ 363 (486)
T 3pqa_A 288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNI 363 (486)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 5899999999 9999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI 578 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~ 578 (605)
+++||+||||++|++|+| +|||+++|+++|||++||||+|.++++++++++++|++. .+.+||||+|+||+
T Consensus 364 i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~ 442 (486)
T 3pqa_A 364 LCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGL 442 (486)
T ss_dssp GGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEE
T ss_pred hhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcC
Confidence 999999999999999999 999999999999999999999999999999999999832 23679999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcCCC
Q psy1099 579 GRELGKAALDEYTELKTVTESPLR 602 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~~~ 602 (605)
|+++|++++++||+.|+|+.+...
T Consensus 443 Gr~~g~~gl~~f~~~k~v~~~~~~ 466 (486)
T 3pqa_A 443 GREGVKYAMEEMSNIKTIIISKAE 466 (486)
T ss_dssp SCBSHHHHHHHTEEEEEEEEEC--
T ss_pred CCCCcHHHHHHhhceEEEEEcCCc
Confidence 999999999999999999876543
No 28
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=4.7e-58 Score=493.52 Aligned_cols=232 Identities=29% Similarity=0.432 Sum_probs=216.3
Q ss_pred eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++|
T Consensus 199 ~I~FTGS~---~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d 274 (469)
T 3sza_A 199 HILYTGST---GVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQN 274 (469)
T ss_dssp EEEEESCH---HHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHH
T ss_pred EEEEECCH---HHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHH
Confidence 44789985 999999988876 999999999999999999999999986 4556999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA 508 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~ 508 (605)
+|+++|.+++.++ +|+|.++++++||++++.+++++++++ +|+++++||... ..|+|++|||+.+++++|+++
T Consensus 275 ~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~ 347 (469)
T 3sza_A 275 QIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVM 347 (469)
T ss_dssp HHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhh
Confidence 9999999999988 699999999999999999999999998 589999999864 479999999999999999999
Q ss_pred ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCCC
Q psy1099 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGIG 579 (605)
Q Consensus 509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~G 579 (605)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+++ .+.+||||+|.||+|
T Consensus 348 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~G 427 (469)
T 3sza_A 348 QEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMG 427 (469)
T ss_dssp TSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEEC
T ss_pred hccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccC
Confidence 99999999999999999999999999999999999999999999999999999833 246799999999999
Q ss_pred ChhHHHHHHHhhhceEEEEcCC
Q psy1099 580 RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 580 ~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+++|.+++++||+.|+|+.+++
T Consensus 428 r~~G~~g~~~ft~~K~v~~~~~ 449 (469)
T 3sza_A 428 SYHGKKSFETFSHRRSCLVRPL 449 (469)
T ss_dssp CBSTHHHHHHTEEEEEEEECCS
T ss_pred ccchHHHHHHhhCeeEEEECCc
Confidence 9999999999999999998865
No 29
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2e-58 Score=499.10 Aligned_cols=239 Identities=36% Similarity=0.537 Sum_probs=223.1
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+|||++ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 229 v~~V~fTGS~---~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 304 (487)
T 2w8n_A 229 VSKISFTGST---TTGKILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304 (487)
T ss_dssp EEEEEEEECH---HHHHHHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred cCEEEEeCCH---HHHHHHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence 3445789985 999999988875 999999999999999999999999987 35559999999999999
Q ss_pred HHHHHHHHHHHHhh-cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCe-eEeeEEeecCCCC
Q psy1099 427 YDTFVKKAVEKAAA-RKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY-FIEPTVFSNVTDD 504 (605)
Q Consensus 427 ~~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~-~~~Pti~~~~~~~ 504 (605)
+|+|+++|.+++.+ +++|+|.++++++||++++.+++++++++++++++|+++++||+.. ..|+ |++|||+.+++++
T Consensus 305 ~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~ 383 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQD 383 (487)
T ss_dssp HHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCc
Confidence 99999999999999 9999999999999999999999999999999999999999999764 3689 9999999999999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESG 577 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG 577 (605)
|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+++ +.+||||+|.||
T Consensus 384 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG 463 (487)
T 2w8n_A 384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSG 463 (487)
T ss_dssp GGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGE
T ss_pred chhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998433 468999999999
Q ss_pred CCChhHHHHHHHhhhceEEEEcC
Q psy1099 578 IGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
+|+++|++++++||+.|+|+.+.
T Consensus 464 ~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 464 LGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp ESCBSTTTGGGGGEEEEEEEECC
T ss_pred cCCCchHHHHHHhcCccEEEEec
Confidence 99999999999999999998764
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-57 Score=495.40 Aligned_cols=238 Identities=32% Similarity=0.504 Sum_probs=208.7
Q ss_pred ceeEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecc
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQED 425 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~ 425 (605)
+...||||+ .+|+.|++.++ + ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++
T Consensus 230 d~I~fTGS~---~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 305 (508)
T 3r64_A 230 KLISFTGST---PVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAA 305 (508)
T ss_dssp SEEEEESCH---HHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHH
T ss_pred cEEEEECCH---HHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehh
Confidence 344688885 99999987765 4 799999999999999999999999986 4566999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 426 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~ 505 (605)
++|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|
T Consensus 306 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~ 382 (508)
T 3r64_A 306 VHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDM 382 (508)
T ss_dssp HHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999975 68999999999999999
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESG 577 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG 577 (605)
++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+. .+.+||||+|.||
T Consensus 383 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG 462 (508)
T 3r64_A 383 EIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSG 462 (508)
T ss_dssp GGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC------------------
T ss_pred hhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999833 3457999999999
Q ss_pred CCChhHHHHHHHhhhceEEEEcCCC
Q psy1099 578 IGRELGKAALDEYTELKTVTESPLR 602 (605)
Q Consensus 578 ~G~~~g~~~~~~~~~~k~v~~~~~~ 602 (605)
+|+++|++++++||+.|+|+.+...
T Consensus 463 ~Gr~~G~~~l~~ft~~k~v~~~~~~ 487 (508)
T 3r64_A 463 LGRFNGDWAIEEFTTDRWIGIKRSA 487 (508)
T ss_dssp --CCCHHHHHHHTEEEEEEEEECCS
T ss_pred CCcCccHHHHHHhhceEEEEEeccc
Confidence 9999999999999999999876543
No 31
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.1e-57 Score=492.64 Aligned_cols=239 Identities=27% Similarity=0.441 Sum_probs=223.6
Q ss_pred eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
..+||+|+ .+|+.+++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++|
T Consensus 205 ~v~FTGS~---~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d 280 (474)
T 4h7n_A 205 FVCFTGSV---ATGREVAETAAR-RFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFE 280 (474)
T ss_dssp EEEEESCH---HHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred eEEecccc---chhhhhhhhhhc-ccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHH
Confidence 34789985 999999988876 999999999999999999999999986 5666999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCeeEeeEEeecCCCCCcc
Q psy1099 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG-DKGYFIEPTVFSNVTDDFKI 507 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~-~~g~~~~Pti~~~~~~~~~~ 507 (605)
+|++++.+++.++++|+|.++++++||++++.+++++.+++++++++|++++.||...+ ..|+|++|||+.+++++|++
T Consensus 281 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i 360 (474)
T 4h7n_A 281 EFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKV 360 (474)
T ss_dssp HHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGG
T ss_pred HHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccccc
Confidence 99999999999999999999999999999999999999999999999999999997543 46899999999999999999
Q ss_pred cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccccCCCCC
Q psy1099 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGI 578 (605)
Q Consensus 508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~~~SG~ 578 (605)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|++.+ +..||||+|.||+
T Consensus 361 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~ 440 (474)
T 4h7n_A 361 MTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGL 440 (474)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEE
T ss_pred ccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999443 3579999999999
Q ss_pred C-ChhHHHHHHHhhhceEEEEcCC
Q psy1099 579 G-RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 579 G-~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
| +++|.+++++||+.|+|+++..
T Consensus 441 G~~~~G~~g~~~f~~~k~v~~~~~ 464 (474)
T 4h7n_A 441 GGSRVGAAGLKRFLRKQAFLIKTN 464 (474)
T ss_dssp SCCSSTTHHHHTTEEEEEEEEECS
T ss_pred CCCcchHHHHHHhCeEEEEEECCC
Confidence 8 7899999999999999987654
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=6.7e-58 Score=496.59 Aligned_cols=239 Identities=28% Similarity=0.447 Sum_probs=222.6
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+...||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 240 vd~I~FTGS~---~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 315 (500)
T 2j6l_A 240 VNLLSFTGST---QVGKQVGLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESI 315 (500)
T ss_dssp CSEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTT
T ss_pred cCEEEEECCH---HHHHHHHHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHH
Confidence 3445789885 999999988876 999999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|+
T Consensus 316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~ 395 (500)
T 2j6l_A 316 HDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395 (500)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCH
T ss_pred HHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcCh
Confidence 99999999999999999999999999999999999999999999999999999999976445699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHH--HHcccCcccC--------CCCcccccCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA--HAINAGSAVV--------PQAPFGGFKES 576 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~--~~~~~G~~~~--------~~~PfGG~~~S 576 (605)
+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++ .++++|.+++ +.+||||+|.|
T Consensus 396 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~S 475 (500)
T 2j6l_A 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHT 475 (500)
T ss_dssp HHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGG
T ss_pred hhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCC
Confidence 9999999999999999999999999999999999999999999999999 7799998332 45799999999
Q ss_pred CCCChhHHHHHHHhhhceEEEEc
Q psy1099 577 GIGRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 577 G~G~~~g~~~~~~~~~~k~v~~~ 599 (605)
|+|+++|.+++++|++.|+|+.+
T Consensus 476 G~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 476 GGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp CSCCEESTTGGGGGEEEEEEEEE
T ss_pred CCCCcchHHHHHHhhceEEEEEe
Confidence 99999999999999999999874
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.2e-57 Score=496.39 Aligned_cols=238 Identities=35% Similarity=0.534 Sum_probs=218.9
Q ss_pred cceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY 421 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~ 421 (605)
.+..+||||+ .+|+.|++.++. +++||+++|||||||+||++|||++.|+ .|+.|++++|+|
T Consensus 253 v~~I~FTGS~---~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvl 329 (516)
T 1uzb_A 253 IRFINFTGSL---EVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLI 329 (516)
T ss_dssp CCEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred cCEEEecCCH---HHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEE
Confidence 3445788885 999999988771 4899999999999999999999999986 456699999999
Q ss_pred EecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecC
Q psy1099 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV 501 (605)
Q Consensus 422 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~ 501 (605)
||++++|+|+++|.+++.++++|+| ++++++||++++.+++++++++++++++| ++++||...+..|+|++|||+.++
T Consensus 330 V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v 407 (516)
T 1uzb_A 330 LTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEV 407 (516)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESC
T ss_pred EchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECC
Confidence 9999999999999999999999999 99999999999999999999999999988 899999753346999999999999
Q ss_pred CCCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCcccc
Q psy1099 502 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGG 572 (605)
Q Consensus 502 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG 572 (605)
+++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++ +.+||||
T Consensus 408 ~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG 487 (516)
T 1uzb_A 408 PPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGG 487 (516)
T ss_dssp CTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCC
T ss_pred CCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998332 3579999
Q ss_pred cCCCCCCC-hhHHHHHHHhhhceEEEEc
Q psy1099 573 FKESGIGR-ELGKAALDEYTELKTVTES 599 (605)
Q Consensus 573 ~~~SG~G~-~~g~~~~~~~~~~k~v~~~ 599 (605)
+|.||+|+ ++|.+++++||+.|+|+.+
T Consensus 488 ~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 488 FKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred cCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 99999995 6889999999999999864
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.3e-58 Score=496.05 Aligned_cols=237 Identities=42% Similarity=0.722 Sum_probs=199.4
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~ 427 (605)
....||||. .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++
T Consensus 220 ~~v~fTGS~---~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~ 295 (478)
T 3ty7_A 220 RMMSFTGSG---PTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295 (478)
T ss_dssp CEEEECSCH---HHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTH
T ss_pred CEEEEECcH---HHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHH
Confidence 344678875 889888877765 899999999999999999999999986 456699999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-C--CCCeeEeeEEeecCCCC
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-G--DKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-~--~~g~~~~Pti~~~~~~~ 504 (605)
|+|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||... + ..|+|++|||+.+++++
T Consensus 296 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~ 375 (478)
T 3ty7_A 296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQ 375 (478)
T ss_dssp HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999432 1 47999999999999999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC------CCCcccccCCCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGI 578 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~------~~~PfGG~~~SG~ 578 (605)
|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|++.+ +.+||||+|.||+
T Consensus 376 ~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~PfGG~k~SG~ 455 (478)
T 3ty7_A 376 MTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQSGL 455 (478)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTCC---------------
T ss_pred CcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcC
Confidence 9999999999999999999999999999999999999999999999999999999998443 4579999999999
Q ss_pred CChhHHHHHHHhhhceEEEE
Q psy1099 579 GRELGKAALDEYTELKTVTE 598 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~ 598 (605)
|+++|++++++||+.|+|+.
T Consensus 456 G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 456 GREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp -------CCGGGEEEEEEET
T ss_pred CccchHHHHHHhcCeEEEEE
Confidence 99999999999999999984
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.2e-57 Score=494.17 Aligned_cols=235 Identities=28% Similarity=0.462 Sum_probs=219.6
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++ +||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 236 vd~I~FTGS~---~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 309 (501)
T 1uxt_A 236 VAAVSFTGST---EVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPV 309 (501)
T ss_dssp CCEEEEESCH---HHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHH
T ss_pred cCEEEEeCcH---HHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccch
Confidence 3444789985 99999987765 89999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCC-eeEeeEEeecCC---
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVT--- 502 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g-~~~~Pti~~~~~--- 502 (605)
+|+|+++|.+++.++++|+|.++++++||++++.+++++++++++++++|+++++||+. .| +|++|||+.+++
T Consensus 310 ~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~ 386 (501)
T 1uxt_A 310 YGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRV 386 (501)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHH
T ss_pred HHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999975 58 999999999999
Q ss_pred CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccC
Q psy1099 503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFK 574 (605)
Q Consensus 503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~ 574 (605)
++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.+.+ +.+||||+|
T Consensus 387 ~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k 466 (501)
T 1uxt_A 387 KDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRK 466 (501)
T ss_dssp TTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEE
T ss_pred CcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999998322 457999999
Q ss_pred CCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 575 ESGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 575 ~SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
+||+|+++|++++++||+.|+|+.+.
T Consensus 467 ~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 467 KSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp TTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CCCCCccChHHHHHHhCceeEEEEec
Confidence 99999999999999999999998764
No 36
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2e-57 Score=490.80 Aligned_cols=233 Identities=31% Similarity=0.445 Sum_probs=217.9
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.+..+||||+ .+|+.|++.++ +||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 223 v~~V~fTGS~---~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i 296 (475)
T 1euh_A 223 VNFINFTGST---GIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296 (475)
T ss_dssp CCEEEEESCH---HHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHH
T ss_pred cCEEEEECch---HHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhH
Confidence 3445788885 99999987665 89999999999999999999999986 45669999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|.+ ++++||++++.+++++.+++++++++|+++++||+. .|+|++|||+.+++++|+
T Consensus 297 ~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~ 372 (475)
T 1euh_A 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372 (475)
T ss_dssp HHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCH
Confidence 9999999999999999999999 999999999999999999999999999999999975 589999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC--------CCCcccccCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGI 578 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~--------~~~PfGG~~~SG~ 578 (605)
+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+.+ +.+||||+|.||+
T Consensus 373 ~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~ 452 (475)
T 1euh_A 373 LAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGA 452 (475)
T ss_dssp GGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEE
T ss_pred HHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999998433 3579999999999
Q ss_pred CChhHHHHHHHhhhceEEEEc
Q psy1099 579 GRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~ 599 (605)
|+++|++++++||+.|+|+.+
T Consensus 453 G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 453 GIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp SCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999875
No 37
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.9e-57 Score=490.36 Aligned_cols=238 Identities=32% Similarity=0.480 Sum_probs=221.1
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCe-EEEeccc
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSR-TYVQEDI 426 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~-v~v~~~~ 426 (605)
+..+||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++| +|||++
T Consensus 221 ~~I~fTGS~---~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~- 295 (486)
T 1t90_A 221 KAISFVGSK---PVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI- 295 (486)
T ss_dssp EEEEEESCH---HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-
T ss_pred CEEEEeCCH---HHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-
Confidence 344688885 999999988876 999999999999999999999999986 4666999999 999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc-CCCCeeEeeEEeecCCCCC
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK-GDKGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~-~~~g~~~~Pti~~~~~~~~ 505 (605)
+|+|+++|.++++++++|+|.++++++||+++..+++++.+++++++++|+++++||+.. ...|+|++|||+.+++++|
T Consensus 296 ~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~ 375 (486)
T 1t90_A 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEM 375 (486)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999742 2369999999999999999
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESG 577 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG 577 (605)
++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.++ .+.+||||+|.||
T Consensus 376 ~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG 455 (486)
T 1t90_A 376 TIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSF 455 (486)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTE
T ss_pred HhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999832 2457999999999
Q ss_pred CC--ChhHHHHHHHhhhceEEEEcC
Q psy1099 578 IG--RELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 578 ~G--~~~g~~~~~~~~~~k~v~~~~ 600 (605)
+| +++|++++++||+.|+|+.+.
T Consensus 456 ~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 456 FGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp ESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCccchHHHHHHhhceEEEEEec
Confidence 99 899999999999999998764
No 38
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-57 Score=492.66 Aligned_cols=237 Identities=34% Similarity=0.520 Sum_probs=203.7
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
.....|||++ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 224 v~~v~fTGS~---~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i 299 (485)
T 4dng_A 224 PRLISFTGST---AVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDV 299 (485)
T ss_dssp CSEEEEEECH---HHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHH
T ss_pred CCEEEEECCc---HHHHHHHHHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHH
Confidence 3445789996 999999988876 999999999999999999999999986 34459999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCc
Q psy1099 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506 (605)
Q Consensus 427 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~ 506 (605)
+|+|+++|.+++.++++|+|.++.+++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|+
T Consensus 300 ~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~ 376 (485)
T 4dng_A 300 YDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSK 376 (485)
T ss_dssp HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 699999999999999999
Q ss_pred ccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCCCC
Q psy1099 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKESGI 578 (605)
Q Consensus 507 ~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~SG~ 578 (605)
+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.++ .+.+||||+|.||+
T Consensus 377 i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~ 456 (485)
T 4dng_A 377 IAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGV 456 (485)
T ss_dssp HHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------
T ss_pred hhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999833 34579999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcC
Q psy1099 579 GRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+++|++++++||+.|+|+.+.
T Consensus 457 G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 457 GRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp ----CHHHHHHHEEEEEEEEEC
T ss_pred CccchHHHHHHhhceEEEEEec
Confidence 9999999999999999998754
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2e-56 Score=488.45 Aligned_cols=238 Identities=27% Similarity=0.396 Sum_probs=220.1
Q ss_pred ceeEEEecCCccccHHHHHHHHHhcccc------ceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEE
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLK------RVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTY 421 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~------~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~ 421 (605)
...+||||+ .+|+.|++.++. ++| |+++|||||||+||++|||++.|+ .|+.|++++|+|
T Consensus 280 ~~I~FTGSt---~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~ 355 (563)
T 4e3x_A 280 CGINFTGSV---PTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLY 355 (563)
T ss_dssp EEEEEESCH---HHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred CEEEEECCH---HHHHHHHHHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEE
Confidence 344789985 999999988886 887 499999999999999999999986 456699999999
Q ss_pred EecccHHHHHHHHHHHHhhcccCCC-CCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCeeEeeEEee
Q psy1099 422 VQEDIYDTFVKKAVEKAAARKVGDP-FDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFS 499 (605)
Q Consensus 422 v~~~~~~~~~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~~g~~~~Pti~~ 499 (605)
||++++|+|+++|+++++++++|+| .++.+++||+|++.+++++.++++++++ .|+++++||...+..|+|++|||+.
T Consensus 356 V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~ 435 (563)
T 4e3x_A 356 VPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIE 435 (563)
T ss_dssp EEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEE
T ss_pred EecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEe
Confidence 9999999999999999999999999 9999999999999999999999999996 7999999998766689999999999
Q ss_pred cCCCCCcccccceeeeeeeeEeeCC--HHHHHHHh-hcCCCCceEEEEcCCHHHHHHHHHHcc--cCccc---------C
Q psy1099 500 NVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSAV---------V 565 (605)
Q Consensus 500 ~~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~~~~~~~~~~~--~G~~~---------~ 565 (605)
+++++|++++||+||||++|++|+| ++|||+++ |.++|||+++|||+|.+.+++++++++ +|.+. .
T Consensus 436 ~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~ 515 (563)
T 4e3x_A 436 SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVV 515 (563)
T ss_dssp ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCT
T ss_pred cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCc
Confidence 9999999999999999999999997 79999999 789999999999999999999999976 89833 2
Q ss_pred CCCcccccCCCCCC-ChhHHHHHHHhhhceEEEEc
Q psy1099 566 PQAPFGGFKESGIG-RELGKAALDEYTELKTVTES 599 (605)
Q Consensus 566 ~~~PfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~ 599 (605)
+.+||||+|.||+| +.+|+++++.|++.|+|..+
T Consensus 516 ~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~ 550 (563)
T 4e3x_A 516 GQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET 550 (563)
T ss_dssp TTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred CCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence 45799999999998 89999999999999999875
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.3e-55 Score=474.36 Aligned_cols=229 Identities=28% Similarity=0.430 Sum_probs=211.0
Q ss_pred eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
...||||+ .+|+.|++.++. ++||+++|||||||+||++|||++.|+ .|+.|++++|+|||++++|
T Consensus 209 ~V~fTGS~---~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d 284 (457)
T 3lns_A 209 FIFFTGSP---NVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKD 284 (457)
T ss_dssp EEEEESCH---HHHHHHHHHHHT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHH
T ss_pred EEEEECCH---HHHHHHHHHHhh-ccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHH
Confidence 34688885 999999988876 999999999999999999999999986 4566999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA 508 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~ 508 (605)
+|+++|++++.+++ |.++ ++||++++.++++++++++++ ++++++||... ..|+|++|||+.+++++|+++
T Consensus 285 ~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~ 355 (457)
T 3lns_A 285 ALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLM 355 (457)
T ss_dssp HHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhh
Confidence 99999999999987 6665 999999999999999999986 36999999753 369999999999999999999
Q ss_pred ccceeeeeeeeEeeCCHHHHHHHhhc-CCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCcccccCCCCC
Q psy1099 509 REEIFGPVQTIIKFKTLDEVIERAND-TKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGFKESGI 578 (605)
Q Consensus 509 ~eE~FGPvl~i~~~~~~~eai~~~n~-~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~~~SG~ 578 (605)
+||+||||++|++|+|++|||+++|+ ++|||+++|||+|.+.++++++++++|+++ .+.+||||+|.||+
T Consensus 356 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~ 435 (457)
T 3lns_A 356 SEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGM 435 (457)
T ss_dssp SSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEE
T ss_pred cCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCC
Confidence 99999999999999999999999999 999999999999999999999999999833 34579999999999
Q ss_pred CChhHHHHHHHhhhceEEEEcC
Q psy1099 579 GRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 579 G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+++|++++++||+.|+|++.|
T Consensus 436 G~~~g~~~~~~f~~~k~v~~~p 457 (457)
T 3lns_A 436 GEYHGHFSYLTFTHKKSVRIVP 457 (457)
T ss_dssp CCBSHHHHHHHTEEEEEEEECC
T ss_pred CCCchHHHHHHhhCeeEEEeCC
Confidence 9999999999999999998765
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=9.3e-56 Score=484.00 Aligned_cols=238 Identities=21% Similarity=0.297 Sum_probs=215.8
Q ss_pred eeEEEecCCccccHHHHHHHHH-hccccceeeecCCCCcEEEcCCC-----CHHHHH----------hcccccccCeEEE
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAA-ASNLKRVSLELGGKSPLVICADA-----DVDMAY----------YYCFVCAGSRTYV 422 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a-~~~~~~~~lElgG~~p~iV~~da-----d~~~a~----------~~~~c~a~~~v~v 422 (605)
..+||||+ .+|+.|++.++ ++++||+++|||||||+||++|| |++.|+ .|+.|++++|+||
T Consensus 231 ~V~FTGS~---~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 307 (534)
T 2y53_A 231 VVSFTGSA---DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307 (534)
T ss_dssp EEEEESCH---HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred EEEEECCH---HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence 34678885 99999988764 35899999999999999999999 899886 4666999999999
Q ss_pred ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCeeEeeE
Q psy1099 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK------GDKGYFIEPT 496 (605)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~------~~~g~~~~Pt 496 (605)
|++++|+|+++|+++++++++|+|.++++++||++++.++++++++++++ .+|+++++||+.. ...|+|++||
T Consensus 308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT 386 (534)
T 2y53_A 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH 386 (534)
T ss_dssp EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence 99999999999999999999999999999999999999999999999999 6899999998642 1369999999
Q ss_pred EeecCCCC--CcccccceeeeeeeeEeeC---CH-----HHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHc--ccCccc
Q psy1099 497 VFSNVTDD--FKIAREEIFGPVQTIIKFK---TL-----DEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NAGSAV 564 (605)
Q Consensus 497 i~~~~~~~--~~~~~eE~FGPvl~i~~~~---~~-----~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~--~~G~~~ 564 (605)
|+.+++++ +++++||+||||++|++|+ |+ +|||+++|+++|||+++|||+|.++++++++++ ++|.++
T Consensus 387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~ 466 (534)
T 2y53_A 387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466 (534)
T ss_dssp EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence 99999987 6899999999999999999 99 999999999999999999999999999999999 788722
Q ss_pred ----------------CCCCcccccCCCCCCCh-hHHHHHHHhhhceEEEEcC
Q psy1099 565 ----------------VPQAPFGGFKESGIGRE-LGKAALDEYTELKTVTESP 600 (605)
Q Consensus 565 ----------------~~~~PfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~~ 600 (605)
.+.+||||+|.||+|++ +|.+++++|++.|++...|
T Consensus 467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 24689999999999999 6999999999999998654
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.3e-54 Score=498.91 Aligned_cols=240 Identities=31% Similarity=0.494 Sum_probs=221.2
Q ss_pred ceeEEEecCCccccHHHHHHHHHh-----ccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEE
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAA-----SNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYV 422 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~-----~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v 422 (605)
....||||+ .+|+.|.+.++. +++||+++|||||||+||++|||++.|+ .|+.|++++|+||
T Consensus 747 ~~V~FTGSt---~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V 823 (1026)
T 4f9i_A 747 SLIAFTGSM---ETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIV 823 (1026)
T ss_dssp EEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CEEEeCCCH---HHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEe
Confidence 344688885 999999988772 4789999999999999999999999986 4566999999999
Q ss_pred ecccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCC
Q psy1099 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVT 502 (605)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~ 502 (605)
|++++|+|+++|++++.++++|+|.++++++||+|++.+++++.+++++++++| ++++||...+..|+|++|||+.+++
T Consensus 824 ~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~ 902 (1026)
T 4f9i_A 824 LDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIK 902 (1026)
T ss_dssp EGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCC
T ss_pred cHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCC
Confidence 999999999999999999999999999999999999999999999999999998 9999997654459999999999999
Q ss_pred CCCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc---------CCCCccccc
Q psy1099 503 DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---------VPQAPFGGF 573 (605)
Q Consensus 503 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~---------~~~~PfGG~ 573 (605)
+++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+. .+.+||||+
T Consensus 903 ~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~ 982 (1026)
T 4f9i_A 903 PEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGA 982 (1026)
T ss_dssp TTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCC
T ss_pred CCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999832 246799999
Q ss_pred CCCCCCC-hhHHHHHHHhhhceEEEEcCC
Q psy1099 574 KESGIGR-ELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 574 ~~SG~G~-~~g~~~~~~~~~~k~v~~~~~ 601 (605)
|.||+|+ .+|+++++.|++.|+|+.+..
T Consensus 983 k~SG~G~~~gG~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 983 RMSGVGTKAGGPDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp GGGBSSCCBTSTTTGGGGEEEEEEEEECC
T ss_pred CcCCCCCCcCCHHHHHHhceEEEEEEecc
Confidence 9999995 578999999999999987654
No 43
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.2e-54 Score=465.43 Aligned_cols=231 Identities=23% Similarity=0.328 Sum_probs=213.0
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccce-eeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEeccc
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRV-SLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDI 426 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~-~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~ 426 (605)
+...||||+ .+|+.|++.++. +++|+ ++|||||||+||++|||++.|+ .|+.|++++|+|||+++
T Consensus 219 ~~V~fTGS~---~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~ 294 (490)
T 3ju8_A 219 DGLFFTGSS---RTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGA 294 (490)
T ss_dssp SEEEEESCH---HHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSH
T ss_pred CEEEEECcH---HHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCc
Confidence 344689985 999999888776 89998 8999999999999999999986 46669999999999996
Q ss_pred -HHHHHHHHHHHHhhcccCC-CCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCC
Q psy1099 427 -YDTFVKKAVEKAAARKVGD-PFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 427 -~~~~~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~ 504 (605)
+|+|+++|++++.++++|+ |.++.+++||++++.+++++++++++++++|+++++||...+..|+|++|||+. ++++
T Consensus 295 i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~ 373 (490)
T 3ju8_A 295 WGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAV 373 (490)
T ss_dssp HHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTC
T ss_pred cHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCC
Confidence 9999999999999999999 999999999999999999999999999999999999997666689999999998 9999
Q ss_pred CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc--------CCCCcccccCCC
Q psy1099 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV--------VPQAPFGGFKES 576 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~--------~~~~PfGG~~~S 576 (605)
|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++ .+.+||||+|.|
T Consensus 374 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~S 453 (490)
T 3ju8_A 374 AERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGAS 453 (490)
T ss_dssp SSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGG
T ss_pred CccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999833 245799999999
Q ss_pred CCCChhHHHHHHHhhhceEEEEc
Q psy1099 577 GIGRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 577 G~G~~~g~~~~~~~~~~k~v~~~ 599 (605)
|++ ++++||+.|+|+..
T Consensus 454 G~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 454 GNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp BSS------CCEETTHHHHHEEE
T ss_pred chh------HHHhhheeEEEEEe
Confidence 985 47899999988754
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4e-52 Score=477.23 Aligned_cols=237 Identities=26% Similarity=0.354 Sum_probs=214.8
Q ss_pred cceeEEEecCCccccHHHHHHHHHhc--cccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEec
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAAS--NLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQE 424 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~--~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~ 424 (605)
.....||||+ .+|+.|++.++.+ +++|+++|+|||||+||++|||++.|+ .|+.|++++++|||+
T Consensus 728 Vd~V~FTGSt---~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e 804 (1001)
T 3haz_A 728 IAGVVFTGST---EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQE 804 (1001)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH
T ss_pred cCEEEecCCH---HHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccH
Confidence 3444788885 9999999888862 589999999999999999999999986 455699999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCC
Q psy1099 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD 504 (605)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~ 504 (605)
+++|+|+++|++++.++++|+|.++.+++||+++..+++++.++++++.+.| ++ +||... ..|+|++|||+.+ ++
T Consensus 805 ~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~ 879 (1001)
T 3haz_A 805 DVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TE 879 (1001)
T ss_dssp HHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SS
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CC
Confidence 9999999999999999999999999999999999999999999999999888 88 877653 4699999999974 67
Q ss_pred CcccccceeeeeeeeEeeCC--HHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC---------CCCccccc
Q psy1099 505 FKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGF 573 (605)
Q Consensus 505 ~~~~~eE~FGPvl~i~~~~~--~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~---------~~~PfGG~ 573 (605)
+.+++||+||||++|++|++ ++|||+++|.++|||+++|||+|.+.++++++++++|.+.+ +.+||||+
T Consensus 880 ~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~ 959 (1001)
T 3haz_A 880 AGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGN 959 (1001)
T ss_dssp GGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCC
T ss_pred HHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCc
Confidence 88999999999999999996 79999999999999999999999999999999999998332 35799999
Q ss_pred CCCCCC-ChhHHHHHHHhhhceEEEEcCC
Q psy1099 574 KESGIG-RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 574 ~~SG~G-~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
|.||+| +.+|++++++||+.|+|+.+..
T Consensus 960 k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 960 GLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp GGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred ccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 999999 4678999999999999998654
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-49 Score=433.81 Aligned_cols=226 Identities=18% Similarity=0.182 Sum_probs=200.8
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccc--cceeeecCCCCcEEEcCCC---CHHHHH----------hcccccccCeEE
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNL--KRVSLELGGKSPLVICADA---DVDMAY----------YYCFVCAGSRTY 421 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~--~~~~lElgG~~p~iV~~da---d~~~a~----------~~~~c~a~~~v~ 421 (605)
.+..+||||+ .+|+.|++.++. ++ ||+++|||||||+||++|| |++.|+ .|+.|++++|+|
T Consensus 255 v~~V~fTGS~---~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvl 330 (528)
T 3v4c_A 255 IKAVGFTGSL---AGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAV 330 (528)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEE
T ss_pred CCEEEEECCh---HHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEE
Confidence 4455789985 999999988886 88 9999999999999999999 777765 455699999999
Q ss_pred Eecc-cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099 422 VQED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN 500 (605)
Q Consensus 422 v~~~-~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~ 500 (605)
||++ ++|+|+++|++++++++. .+.+||+++..+.+++.++++ +.|+++++||.. .|+|++|||+.+
T Consensus 331 V~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~ 398 (528)
T 3v4c_A 331 VIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFET 398 (528)
T ss_dssp EESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEE
T ss_pred EecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEe
Confidence 9997 999999999999998864 467999999888887777763 479999999975 799999999998
Q ss_pred CCCC---CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcC--CHHHHHHHHHHcc--cCccc---------
Q psy1099 501 VTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT--NIDTANTFAHAIN--AGSAV--------- 564 (605)
Q Consensus 501 ~~~~---~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~--d~~~~~~~~~~~~--~G~~~--------- 564 (605)
++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|.++
T Consensus 399 ~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~ 478 (528)
T 3v4c_A 399 TGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVE 478 (528)
T ss_dssp EHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCC
T ss_pred cCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCc
Confidence 8887 899999999999999999999999999999999999999999 8899999999997 89832
Q ss_pred -CCCCcccc-cCCCCCCChh--HHHHHHHhhhceEEEE
Q psy1099 565 -VPQAPFGG-FKESGIGREL--GKAALDEYTELKTVTE 598 (605)
Q Consensus 565 -~~~~PfGG-~~~SG~G~~~--g~~~~~~~~~~k~v~~ 598 (605)
.+.+|||| +|.||+|+++ |++++++||+.|++..
T Consensus 479 ~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q~ 516 (528)
T 3v4c_A 479 VVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQN 516 (528)
T ss_dssp CSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEES
T ss_pred cCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhhc
Confidence 24579999 9999999986 9999999999998764
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.7e-49 Score=430.51 Aligned_cols=223 Identities=15% Similarity=0.141 Sum_probs=198.3
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccc--cceeeecCCCCcEEEcCCCCHH--HHH----------hcccccccCeEEE
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNL--KRVSLELGGKSPLVICADADVD--MAY----------YYCFVCAGSRTYV 422 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~--~~~~lElgG~~p~iV~~dad~~--~a~----------~~~~c~a~~~v~v 422 (605)
.+..+||||+ .+|+.|++.++. ++ ||+++|||||||+||++|||++ .|+ .|+.|++++|+||
T Consensus 222 v~~I~FTGS~---~~G~~i~~~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV 297 (510)
T 1ez0_A 222 IKAVGFTGSV---GGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297 (510)
T ss_dssp CCEEEEESCH---HHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEE
T ss_pred CCEEEEeCcH---HHHHHHHHHhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEE
Confidence 4455789985 999999988876 75 9999999999999999999999 775 4556999999999
Q ss_pred ecc-cHHHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099 423 QED-IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSN 500 (605)
Q Consensus 423 ~~~-~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~~g~~~~Pti~~~ 500 (605)
|++ ++|+|+++|.+++.++++ ||++++.+.+++.++++++++ .|+++++||. .|+|++|||+.+
T Consensus 298 ~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~ 363 (510)
T 1ez0_A 298 LNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVT 363 (510)
T ss_dssp ESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEE
T ss_pred eCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEe
Confidence 999 999999999999998763 688888889999999999984 7999999986 299999999998
Q ss_pred CCCC---CcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCH--HHHHHHHHHc--ccCccc---------
Q psy1099 501 VTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI--DTANTFAHAI--NAGSAV--------- 564 (605)
Q Consensus 501 ~~~~---~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~--~~~~~~~~~~--~~G~~~--------- 564 (605)
++++ |++++||+||||++|++|+|++|||+++|+++|||++||||+|. ++++++++++ ++|.++
T Consensus 364 ~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~ 443 (510)
T 1ez0_A 364 SSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVE 443 (510)
T ss_dssp EHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCC
T ss_pred cCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCc
Confidence 8777 99999999999999999999999999999999999999999987 7999999999 688732
Q ss_pred -CCCCcccc-cCCCCCCCh--hHHHHHHHhhhceEEE
Q psy1099 565 -VPQAPFGG-FKESGIGRE--LGKAALDEYTELKTVT 597 (605)
Q Consensus 565 -~~~~PfGG-~~~SG~G~~--~g~~~~~~~~~~k~v~ 597 (605)
.+.+|||| +|.||+|+. +|++++++|++.|++.
T Consensus 444 ~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 444 VGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred cCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 23579999 788999854 7999999999988765
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.8e-47 Score=406.77 Aligned_cols=205 Identities=15% Similarity=0.063 Sum_probs=149.6
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----hcc-----cccccCeEEEecccH
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYC-----FVCAGSRTYVQEDIY 427 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~~~-----~c~a~~~v~v~~~~~ 427 (605)
.+...||||+ .+|+.|++.+ +||+++|||||||+||++|||++.|+ +++ .|++++|+|||+++
T Consensus 211 vd~I~fTGS~---~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~i- 282 (468)
T 1vlu_A 211 IDLVVPRGSN---ALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLINPKF- 282 (468)
T ss_dssp CCEEEEESCH---HHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----CCCCEEEEECTTS-
T ss_pred cCEEEEECCH---HHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCH-
Confidence 3444688885 8999997654 69999999999999999999999987 222 69999999999999
Q ss_pred HHHHHHHHHHHhhccc---CCCCCCCCCCCcccCHHHHHHHHHH-HHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCC
Q psy1099 428 DTFVKKAVEKAAARKV---GDPFDKSVQQGPQVDAEMFTKVLNY-IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTD 503 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~-i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~ 503 (605)
|+|+++|.+++.++++ |+|.+ +++ ++++. ++++||+ | ++||++ +++
T Consensus 283 d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~ 332 (468)
T 1vlu_A 283 SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DAD 332 (468)
T ss_dssp TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC-----
T ss_pred HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eCC
Confidence 9999999999999987 77643 334 55554 3666775 4 689987 788
Q ss_pred CCcccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCccc-----
Q psy1099 504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFG----- 571 (605)
Q Consensus 504 ~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfG----- 571 (605)
++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.+++ +..|||
T Consensus 333 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~ 412 (468)
T 1vlu_A 333 EEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEV 412 (468)
T ss_dssp ----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC----------
T ss_pred CchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999998433 346999
Q ss_pred ccCCCCCCChhHHHHHHHhhhceEEEEcC
Q psy1099 572 GFKESGIGRELGKAALDEYTELKTVTESP 600 (605)
Q Consensus 572 G~~~SG~G~~~g~~~~~~~~~~k~v~~~~ 600 (605)
|+|.||+|++ |++++++||+.|+|+.+.
T Consensus 413 G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 413 GISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp -------------CCSGGGEEEEEEEECS
T ss_pred ceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999 999999999999998763
No 48
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.2e-45 Score=393.14 Aligned_cols=196 Identities=23% Similarity=0.208 Sum_probs=166.0
Q ss_pred cceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----h-----cccccccCeEEEecccH
Q psy1099 357 TELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----Y-----YCFVCAGSRTYVQEDIY 427 (605)
Q Consensus 357 ~~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----~-----~~~c~a~~~v~v~~~~~ 427 (605)
.+..+||||+ .+|+.+++.+ +||+++|||||||+||++|||++.|+ + ++.|++++|+|||++++
T Consensus 208 v~~I~fTGS~---~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~~~i~ 280 (427)
T 1o20_A 208 LSLVIPRGGY---GLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIA 280 (427)
T ss_dssp CSEEEECSCH---HHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEEHHHH
T ss_pred ccEEEeCCCh---HHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEehhhH
Confidence 3445788885 8999997655 59999999999999999999999986 2 22699999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCcc
Q psy1099 428 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 507 (605)
Q Consensus 428 ~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~ 507 (605)
|+|+++|.+++++++++ +.||... .++ + ||| +++++++
T Consensus 281 d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~~-~-Ptl---~~~~~~i 318 (427)
T 1o20_A 281 KEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--REI-V-PDV---VPATEDD 318 (427)
T ss_dssp HHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HHH-S-TTS---EECCGGG
T ss_pred HHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hhh-C-Ccc---cCCCcch
Confidence 99999999999987642 1233221 123 3 885 3457889
Q ss_pred cccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC-
Q psy1099 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG- 579 (605)
Q Consensus 508 ~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G- 579 (605)
++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.+++ +..||||+|+||+|
T Consensus 319 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~ 398 (427)
T 1o20_A 319 WPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGIST 398 (427)
T ss_dssp TTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEEC
T ss_pred hhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999443 34699999999997
Q ss_pred ---ChhHHHHHHHhhhceEEEEcCC
Q psy1099 580 ---RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 580 ---~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
+++|++++++||+.|+|+.+..
T Consensus 399 ~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 399 QRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp SSSSCCEECCTGGGEEEEEEEECSS
T ss_pred CcccCCChHHHHHHhceEEEEECCC
Confidence 4679999999999999988753
No 49
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.6e-45 Score=391.42 Aligned_cols=195 Identities=21% Similarity=0.158 Sum_probs=162.5
Q ss_pred eeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 359 LKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 359 ~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
..+|||++ .+|+.+++.+ +||+++|||||||+||++|||++.|+ .| .|++++|+|||++++|
T Consensus 222 ~V~fTGs~---~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d 293 (444)
T 4ghk_A 222 VIVPRGGK---SLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAP 293 (444)
T ss_dssp EEEECSCH---HHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHH
T ss_pred EEEEECcH---HHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHH
Confidence 33577775 8888876543 79999999999999999999999997 34 6999999999999999
Q ss_pred HHHHHHHHHHhhccc---CCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCC
Q psy1099 429 TFVKKAVEKAAARKV---GDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF 505 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~ 505 (605)
+|+++|++++.++++ |+|.+ .++++++. .| ++ +++++
T Consensus 294 ~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i~~a~---------------~G------~~--~~~~~ 333 (444)
T 4ghk_A 294 AVLSPLGRLYREKGVELRVDADA-----------------RAVLEAAG---------------VG------PL--VDATD 333 (444)
T ss_dssp HHHHHHHHHHHHTTCEEEECHHH-----------------HHHHHHTT---------------CC------CC--EECCS
T ss_pred HHHHHHHHHHHHcCCeecCCHHH-----------------HHHHHhcc---------------cC------cc--cCCCc
Confidence 999999999999887 66431 34555442 12 12 35678
Q ss_pred cccccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCccc-------CCCCcccccCCCCC
Q psy1099 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV-------VPQAPFGGFKESGI 578 (605)
Q Consensus 506 ~~~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~-------~~~~PfGG~~~SG~ 578 (605)
++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+++ .+..||||.|+||+
T Consensus 334 ~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~ 413 (444)
T 4ghk_A 334 EDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGI 413 (444)
T ss_dssp GGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEE
T ss_pred hhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999833 35689999999999
Q ss_pred C----ChhHHHHHHHhhhceEEEEcCC
Q psy1099 579 G----RELGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 579 G----~~~g~~~~~~~~~~k~v~~~~~ 601 (605)
| +++|++++++||+.|+|+.+..
T Consensus 414 g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 414 SNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp ECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred cCCcccCCChhHHHhhceEEEEEECCC
Confidence 8 6789999999999999987654
No 50
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.7e-45 Score=388.98 Aligned_cols=196 Identities=21% Similarity=0.151 Sum_probs=162.7
Q ss_pred ceeEEEecCCccccHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH---------hcccccccCeEEEecccHH
Q psy1099 358 ELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY---------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 358 ~~k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElgG~~p~iV~~dad~~~a~---------~~~~c~a~~~v~v~~~~~~ 428 (605)
+..+||||+ .+|+.|++.++ +||+++|||||||+||++|||++.|+ +|+.|++++|+|||++++|
T Consensus 221 d~I~FTGS~---~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d 294 (463)
T 2h5g_A 221 DLIIPRGSS---QLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLR 294 (463)
T ss_dssp SEEEEESCH---HHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTT
T ss_pred CEEEEECCH---HHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccCCCccccCcEEEEeccccc
Confidence 344688885 99999987665 89999999999999999999999986 4566999999999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeecCCCCCccc
Q psy1099 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIA 508 (605)
Q Consensus 429 ~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~ 508 (605)
||+ ++ +++++++++|++++.|+.. ...|+|+ +++|+++
T Consensus 295 -------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~ 332 (463)
T 2h5g_A 295 -------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSL 332 (463)
T ss_dssp -------------------------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCS
T ss_pred -------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHH
Confidence 343 23 3477788889999855442 2345543 5789999
Q ss_pred ccceeeeeeeeEeeCCHHHHHHHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcccC-------CCCcccccCCCCCC--
Q psy1099 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIG-- 579 (605)
Q Consensus 509 ~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~~~-------~~~PfGG~~~SG~G-- 579 (605)
+||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.+++ +.+||||+|+||+|
T Consensus 333 ~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~ 412 (463)
T 2h5g_A 333 RTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTS 412 (463)
T ss_dssp SCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECC
T ss_pred hccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCC
Confidence 999999999999999999999999999999999999999999999999999998433 46899999999999
Q ss_pred Ch--hHHHHHHHhhhceEEEEcCC
Q psy1099 580 RE--LGKAALDEYTELKTVTESPL 601 (605)
Q Consensus 580 ~~--~g~~~~~~~~~~k~v~~~~~ 601 (605)
++ +|++++++||+.|+|+.+..
T Consensus 413 r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 413 RIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp SSSCCEECCGGGGEEEEEEEECSS
T ss_pred cccCCCHHHHHHhceeEEEEECCC
Confidence 65 89999999999999987643
No 51
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-44 Score=389.87 Aligned_cols=215 Identities=13% Similarity=0.159 Sum_probs=188.4
Q ss_pred eEEEecCCccccHHHHHHHHHhccccceeeecC-CCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHH
Q psy1099 360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELG-GKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYD 428 (605)
Q Consensus 360 k~~t~s~~~~~~g~~v~~~~a~~~~~~~~lElg-G~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~ 428 (605)
..|||++ . +++.++ +++||+ +|+| ||||+||++|||++.|+ .|+.|++++|+|||++++|
T Consensus 195 I~fTGs~---~----v~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d 265 (464)
T 3k9d_A 195 ILATGGS---A----MVKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKE 265 (464)
T ss_dssp EEECSCH---H----HHHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHH
T ss_pred EEEeCCh---H----HHHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHH
Confidence 3566663 2 344444 489999 8998 99999999999999997 4555999999999999999
Q ss_pred HHHHHHHHHH-------hhcccCCCC-CCCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCeeEeeEEeec
Q psy1099 429 TFVKKAVEKA-------AARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN 500 (605)
Q Consensus 429 ~~~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~~~~g~~~~Pti~~~ 500 (605)
+|+++|+++. .++++|+|. ++++++||+++..+++++.++++.++.+|+++++||.. +
T Consensus 266 ~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~ 331 (464)
T 3k9d_A 266 AVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------K 331 (464)
T ss_dssp HHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------C
T ss_pred HHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------C
Confidence 9999999885 467889887 77899999999999999999999999999999998853 5
Q ss_pred CCCCCcccccceeeeeeeeEeeCCHHHHH----HHhhcCCCCceEEEEcCCHHHHHHHHHHcccCcc-------------
Q psy1099 501 VTDDFKIAREEIFGPVQTIIKFKTLDEVI----ERANDTKYGLASGIVTTNIDTANTFAHAINAGSA------------- 563 (605)
Q Consensus 501 ~~~~~~~~~eE~FGPvl~i~~~~~~~eai----~~~n~~~~gL~a~vft~d~~~~~~~~~~~~~G~~------------- 563 (605)
+++++++. ||+||||++|++|+|++||| +++|.++|||+++|||+|.+.++++++++++|++
T Consensus 332 v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~ 410 (464)
T 3k9d_A 332 VGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGA 410 (464)
T ss_dssp CSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTS
T ss_pred CCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCcccccccc
Confidence 67778765 89999999999999999997 7999999999999999999999999999999982
Q ss_pred ---cCCCCcccccCCCCCCChhHHHHHHHhhhceEEEEc
Q psy1099 564 ---VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 599 (605)
Q Consensus 564 ---~~~~~PfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~ 599 (605)
..+.+|||| +.+|.|.++|..++++|++.|+|.+.
T Consensus 411 ~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 411 TTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp SSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 235689999 78899999999999999999999864
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.1e-41 Score=363.28 Aligned_cols=203 Identities=19% Similarity=0.222 Sum_probs=159.6
Q ss_pred HhccccceeeecCCCCcEEEcCCCCHHHHH----------hcccccccCeEEEecccHHHHHHHHHHHHhhcccCCCCCC
Q psy1099 380 AASNLKRVSLELGGKSPLVICADADVDMAY----------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449 (605)
Q Consensus 380 a~~~~~~~~lElgG~~p~iV~~dad~~~a~----------~~~~c~a~~~v~v~~~~~~~~~~~l~~~~~~~~~g~~~~~ 449 (605)
+++++||+++|+|||||+||++|||++.|+ .|+.|++++|+|||++++|+|+++|+++
T Consensus 202 a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~------------ 269 (452)
T 3my7_A 202 AYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH------------ 269 (452)
T ss_dssp HHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT------------
T ss_pred HHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh------------
Confidence 334899999999999999999999999997 4556999999999999999999988765
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHcCCeEEeCCccc---CCCCeeEeeEE-------eecCCCCCcccccceeeeeeee
Q psy1099 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK---GDKGYFIEPTV-------FSNVTDDFKIAREEIFGPVQTI 519 (605)
Q Consensus 450 ~~~~gpli~~~~~~~~~~~i~~a~~~g~~v~~gg~~~---~~~g~~~~Pti-------~~~~~~~~~~~~eE~FGPvl~i 519 (605)
.||++++.+++++.++++++...|++++ ||... ...|+|++||+ +.++++++++++ |+||||++|
T Consensus 270 ---~gpli~~~~~~~v~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v 344 (452)
T 3my7_A 270 ---KAHVLSKTDADKVRKVLLIDGALNAKIV-GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM 344 (452)
T ss_dssp ---TEEECCHHHHHHHHHHHEETTEECGGGT-TCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEE
T ss_pred ---CCCcCCHHHHHHHHHHHHhhcccCCeEe-cCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEE
Confidence 3999999999999999987766777774 66532 13699999997 668899999886 899999999
Q ss_pred EeeCCHHHHHHHhhcCC----CCceEEEEcCCHHHHHH---HHHHcccCcc-cCCCCcccccCCC-----------CCCC
Q psy1099 520 IKFKTLDEVIERANDTK----YGLASGIVTTNIDTANT---FAHAINAGSA-VVPQAPFGGFKES-----------GIGR 580 (605)
Q Consensus 520 ~~~~~~~eai~~~n~~~----~gL~a~vft~d~~~~~~---~~~~~~~G~~-~~~~~PfGG~~~S-----------G~G~ 580 (605)
++|+|++|||+++|++. |||+++|||+|.+.+++ +++++++|++ +|...||||+|.. |.|.
T Consensus 345 ~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~ 424 (452)
T 3my7_A 345 FRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGS 424 (452)
T ss_dssp EEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------
T ss_pred EEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeeeccc
Confidence 99999999999999985 99999999999887777 9999999995 4566899998853 4444
Q ss_pred hhH-----HHHHHHhhhceEEEEc
Q psy1099 581 ELG-----KAALDEYTELKTVTES 599 (605)
Q Consensus 581 ~~g-----~~~~~~~~~~k~v~~~ 599 (605)
.+| ..+.+++.+.|+|.+.
T Consensus 425 ~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 425 WGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp ------CCCCCGGGGEEEEEEECC
T ss_pred cCCCccCCCCChhHeeeeeEEEee
Confidence 433 2356777778887653
No 53
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7.7e-39 Score=344.85 Aligned_cols=259 Identities=41% Similarity=0.718 Sum_probs=237.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.||+++.++++++++||+|+|++|+|+|++.++...|
T Consensus 159 ~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999876532111
Q ss_pred --------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 60 --------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 60 --------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
.|.|.++ +|++||+++||+|++++++++++++
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~l~ 314 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNG----TRVFIHRSQQARFEAKVLERVQRIR 314 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCc----eeeccchhHHHHHHHHHHHHHHhCc
Confidence 1456666 9999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|+++++++||+++..+++++..+|+.+.++|+++..||.....
T Consensus 315 vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---------------------------------- 360 (490)
T 2wme_A 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD---------------------------------- 360 (490)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCT----------------------------------
T ss_pred CCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCc----------------------------------
Confidence 9999999999999999999999999999999999999999875210
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
....+|+|++||
T Consensus 361 --------------------------------------------------------------------~~~~~G~~~~Pt 372 (490)
T 2wme_A 361 --------------------------------------------------------------------GAFGKGAYVAPT 372 (490)
T ss_dssp --------------------------------------------------------------------TTGGGTTCBCCE
T ss_pred --------------------------------------------------------------------ccccCCCccCCE
Confidence 001258999999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+|
T Consensus 373 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~P 452 (490)
T 2wme_A 373 VFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMP 452 (490)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSC
T ss_pred EEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877788999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
|||+|+||+|+++|.+++++|++.|+++.+.
T Consensus 453 FGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 453 VGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp BCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred cccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 9999999999999999999999999988653
No 54
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1e-36 Score=328.77 Aligned_cols=253 Identities=37% Similarity=0.617 Sum_probs=229.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....
T Consensus 165 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~ 244 (484)
T 3ifg_A 165 IARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM 244 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999864321100
Q ss_pred ------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 59 ------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 59 ------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
+ .|.|.++ +|++||+++||+|++++.++++++++
T Consensus 245 ~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 320 (484)
T 3ifg_A 245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCT----NRFFVHERVYDAFADKLAAAVSKLKV 320 (484)
T ss_dssp HHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCC----CeEEEcHHHHHHHHHHHHHHHHhccC
Confidence 0 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++.+||+++..+++++.++|+.+.+.|+++.+||...
T Consensus 321 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~------------------------------------- 363 (484)
T 3ifg_A 321 GRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH------------------------------------- 363 (484)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC-------------------------------------
T ss_pred CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc-------------------------------------
Confidence 9999999999999999999999999988888888877777531
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
...|+|++|||
T Consensus 364 ---------------------------------------------------------------------~~~g~~~~PTv 374 (484)
T 3ifg_A 364 ---------------------------------------------------------------------ALGHGFFEPTV 374 (484)
T ss_dssp ---------------------------------------------------------------------TTCTTCBCCEE
T ss_pred ---------------------------------------------------------------------CCCCceEcCEE
Confidence 12578999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 375 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~Pf 454 (484)
T 3ifg_A 375 LTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPF 454 (484)
T ss_dssp EEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCB
T ss_pred EecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987777889999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
||+|+||+|+++|.+++++|++.|+++.
T Consensus 455 GG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 455 GGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp CCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred CCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999998864
No 55
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.6e-36 Score=327.11 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=232.0
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+++....++
T Consensus 140 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~fTGS~~~G~~i~~ 219 (484)
T 3ros_A 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAE 219 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999654321110
Q ss_pred ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG 97 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg 97 (605)
.|.|.++ +|++||+++||+|++++.++++++++|
T Consensus 220 ~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G 295 (484)
T 3ros_A 220 AAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSS----KRIIVEKSRYDEVLHELKNVFSNLKAG 295 (484)
T ss_dssp HHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSC----CEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCC----ceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 1346666 999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099 98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177 (605)
Q Consensus 98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~ 177 (605)
+|+++++++||+++..+++++.++|+.+.++|+++.+||..
T Consensus 296 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--------------------------------------- 336 (484)
T 3ros_A 296 DPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPE--------------------------------------- 336 (484)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCC---------------------------------------
T ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCc---------------------------------------
Confidence 99999999999999999999999998888888887777743
Q ss_pred HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF 257 (605)
Q Consensus 178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl 257 (605)
....|+|++|||+
T Consensus 337 -------------------------------------------------------------------~~~~g~~~~PTvl 349 (484)
T 3ros_A 337 -------------------------------------------------------------------IDSKGAFFRPTIL 349 (484)
T ss_dssp -------------------------------------------------------------------CCCSSCCCCCEEE
T ss_pred -------------------------------------------------------------------CCCCCceeCCeEe
Confidence 1235889999999
Q ss_pred eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099 258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG 337 (605)
Q Consensus 258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG 337 (605)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|||
T Consensus 350 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfG 429 (484)
T 3ros_A 350 TDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFG 429 (484)
T ss_dssp ECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBC
T ss_pred ecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987778999999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
|+|+||+|+++|.+++++|++.|+++...
T Consensus 430 G~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 430 GIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp CSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred CcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999999999999988763
No 56
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.8e-36 Score=327.63 Aligned_cols=259 Identities=38% Similarity=0.700 Sum_probs=234.3
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|+++|||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+
T Consensus 187 ~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~ 266 (520)
T 3ed6_A 187 ASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIM 266 (520)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999654422110
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|+++++++++++++
T Consensus 267 ~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~l~v 342 (520)
T 3ed6_A 267 KNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAG----SRILVQNSIKDKFEQALIDRVKKIKL 342 (520)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCC----CEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccC----ceEEEcHHHHHHHHHHHHHHHHhccC
Confidence 1456666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++.+||+++..+++++.++|+.+.+.|+++.+||+.+..
T Consensus 343 G~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~----------------------------------- 387 (520)
T 3ed6_A 343 GNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDR----------------------------------- 387 (520)
T ss_dssp CCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCC-----------------------------------
T ss_pred CCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcc-----------------------------------
Confidence 999999999999999999999999999999999999888864200
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.....|+|++|||
T Consensus 388 -------------------------------------------------------------------~~~~~g~f~~PTv 400 (520)
T 3ed6_A 388 -------------------------------------------------------------------DDLKDGLFFEPTV 400 (520)
T ss_dssp -------------------------------------------------------------------GGGTTTTCCCCEE
T ss_pred -------------------------------------------------------------------ccCCCCceECCeE
Confidence 0012589999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 401 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~Pf 480 (520)
T 3ed6_A 401 ITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPW 480 (520)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCB
T ss_pred EecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987666789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|+||+|+++|.+++++|++.|+++...
T Consensus 481 GG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 481 GGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999999987653
No 57
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.3e-36 Score=325.93 Aligned_cols=256 Identities=34% Similarity=0.586 Sum_probs=231.5
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW--------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~--------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+... ++
T Consensus 164 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~ 243 (506)
T 3rh9_A 164 IAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI 243 (506)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999986432110 00
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 244 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 319 (506)
T 3rh9_A 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCA----NRIFVHEKVADAFGQKLAERVNKMTV 319 (506)
T ss_dssp HHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSC----CEEEEETTTHHHHHHHHHHHHHHCCB
T ss_pred HHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccC----cEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 1456666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.++|+++.+||...
T Consensus 320 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~------------------------------------- 362 (506)
T 3rh9_A 320 GDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPA------------------------------------- 362 (506)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGG-------------------------------------
T ss_pred CCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcC-------------------------------------
Confidence 9999999999999999999999999999888888888877531
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
....|+|++|||
T Consensus 363 --------------------------------------------------------------------~~~~g~~~~PTv 374 (506)
T 3rh9_A 363 --------------------------------------------------------------------ELGDGLFFPPTV 374 (506)
T ss_dssp --------------------------------------------------------------------GCCSSSCCCCEE
T ss_pred --------------------------------------------------------------------CCCCCcEECCeE
Confidence 011578999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 375 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf 454 (506)
T 3rh9_A 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPF 454 (506)
T ss_dssp EECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCB
T ss_pred EccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987777788999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|.||+|+++|.+++++|++.|+++...
T Consensus 455 GG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 455 GGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp CCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred cCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999987653
No 58
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2e-36 Score=327.43 Aligned_cols=252 Identities=39% Similarity=0.632 Sum_probs=228.3
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+
T Consensus 185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 264 (504)
T 3ek1_A 185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264 (504)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998643211100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|+++++++.+++++
T Consensus 265 ~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 340 (504)
T 3ek1_A 265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCA----NRIYVQRGVYDKFAEKLAAKVKELKV 340 (504)
T ss_dssp HHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC----CEEEEehhHHHHHHHHHHHHHhhccc
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.+.|+++.+||..
T Consensus 341 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------------------------------------- 382 (504)
T 3ek1_A 341 GNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-------------------------------------- 382 (504)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--------------------------------------
T ss_pred CCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--------------------------------------
Confidence 999999999999999999999988888887777777666631
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
..|+|++|||
T Consensus 383 ----------------------------------------------------------------------~~g~~~~PTv 392 (504)
T 3ek1_A 383 ----------------------------------------------------------------------LGGLFFEPGI 392 (504)
T ss_dssp ----------------------------------------------------------------------EETTEECCEE
T ss_pred ----------------------------------------------------------------------CCCceECCeE
Confidence 1478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||
T Consensus 393 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~Pf 472 (504)
T 3ek1_A 393 LTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPF 472 (504)
T ss_dssp EEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCB
T ss_pred EecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987777789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
||+|+||+|+++|.+++++|++.|+++..
T Consensus 473 GG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 473 GGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp CCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred CCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 99999999999999999999999998765
No 59
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.8e-36 Score=326.29 Aligned_cols=253 Identities=32% Similarity=0.618 Sum_probs=230.0
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.++++++.++ +|+|++|+|+|++.+....+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999999 99999999999765421100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 257 ~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~v 332 (498)
T 4f3x_A 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAA----CRIYAEAGIYEKLVADLTSAVSTIRY 332 (498)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCE----EEEEEETTTHHHHHHHHHHHHTTCCC
T ss_pred HHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCC----ceEEecHHHHHHHHHHHHHHHHhccc
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCc-EEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~-~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
|+|+++++.+||+++..+++++.++|+.+.++|+ ++.+||..
T Consensus 333 G~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~------------------------------------- 375 (498)
T 4f3x_A 333 NLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT------------------------------------- 375 (498)
T ss_dssp SCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSB-------------------------------------
T ss_pred CCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCcc-------------------------------------
Confidence 9999999999999999999999999988888887 77777753
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
....|+|++||
T Consensus 376 ---------------------------------------------------------------------~~~~g~~~~PT 386 (498)
T 4f3x_A 376 ---------------------------------------------------------------------GSDEGFFFQPT 386 (498)
T ss_dssp ---------------------------------------------------------------------CCSSSCCBCCE
T ss_pred ---------------------------------------------------------------------CCCCCcEECCE
Confidence 12358899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus 387 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~P 466 (498)
T 4f3x_A 387 VVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMP 466 (498)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSC
T ss_pred EeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|+||+|+++|.+++++|++.|+++..
T Consensus 467 fGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 467 HGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp BCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred cCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999988754
No 60
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=5.9e-36 Score=324.70 Aligned_cols=256 Identities=39% Similarity=0.749 Sum_probs=232.0
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-hhh---------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA-PYW--------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~-~~~--------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+.. .++
T Consensus 168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 247 (503)
T 3iwj_A 168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998643211 000
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSAT----SRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCE----EEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccC----CeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.+.|+++.+||....
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~------------------------------------ 367 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE------------------------------------ 367 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT------------------------------------
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc------------------------------------
Confidence 99999999999999999999999999998888888888875310
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
....|+|++|||
T Consensus 368 --------------------------------------------------------------------~~~~g~~~~PTv 379 (503)
T 3iwj_A 368 --------------------------------------------------------------------HLKKGFFIEPTI 379 (503)
T ss_dssp --------------------------------------------------------------------TCCSSSCCCCEE
T ss_pred --------------------------------------------------------------------cCCCCceeCCee
Confidence 013588999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+||
T Consensus 380 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~Pf 459 (503)
T 3iwj_A 380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPW 459 (503)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCB
T ss_pred eecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987777889999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
||+|.||+|+++|.+++++|++.|+++..
T Consensus 460 GG~k~SG~G~~~G~~g~~~f~~~k~v~~~ 488 (503)
T 3iwj_A 460 GGVKRSGFGRELGEWGLDNYLSVKQVTQY 488 (503)
T ss_dssp CCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCcCcccCCCcchHHHHHHhhCeEEEEEe
Confidence 99999999999999999999999998765
No 61
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=5e-36 Score=325.38 Aligned_cols=253 Identities=44% Similarity=0.801 Sum_probs=228.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------ 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------ 57 (605)
++|+++|||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|.+.....
T Consensus 195 ~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~ 274 (517)
T 2o2p_A 195 LSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 274 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999985422110
Q ss_pred ------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 58 ------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 58 ------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
.+ .|.|.++ +|++||+++||+|++++++++++++
T Consensus 275 ~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~ 350 (517)
T 2o2p_A 275 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA----GRLFVEESIHNQFVQKVVEEVEKMK 350 (517)
T ss_dssp HHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----eEEEEeHHHHHHHHHHHHHHHHhcC
Confidence 00 0346665 9999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|+++++++||+++..+++++..+|+.+.++|+++.+||+.
T Consensus 351 vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~------------------------------------- 393 (517)
T 2o2p_A 351 IGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQ------------------------------------- 393 (517)
T ss_dssp BSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB-------------------------------------
T ss_pred CCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecccc-------------------------------------
Confidence 9999999999999999999999999998888888887777753
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
....|+|++||
T Consensus 394 ---------------------------------------------------------------------~~~~g~~~~PT 404 (517)
T 2o2p_A 394 ---------------------------------------------------------------------VPRPGFFFQPT 404 (517)
T ss_dssp ---------------------------------------------------------------------CSSSSCCBCCE
T ss_pred ---------------------------------------------------------------------CCCCCCeECCE
Confidence 11247899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 333 (605)
|+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.
T Consensus 405 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~ 484 (517)
T 2o2p_A 405 VFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVA 484 (517)
T ss_dssp EEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTT
T ss_pred EEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCC
Confidence 9999999999999999999999999999 99999999999999999999999999999999999999999987766789
Q ss_pred CCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
+||||+|+||+|+++|.+++++|++.|+++.
T Consensus 485 ~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~ 515 (517)
T 2o2p_A 485 APFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515 (517)
T ss_dssp SCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred CCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence 9999999999999999999999999998865
No 62
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=9.9e-36 Score=321.87 Aligned_cols=254 Identities=35% Similarity=0.615 Sum_probs=228.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++......+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 178 VTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999764422110
Q ss_pred ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG 97 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg 97 (605)
.|.|.++ +|++||+++||+|+++++++++++++|
T Consensus 258 ~~aa~~~k~v~lElGGk~p~IV~~dAD~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~vG 333 (497)
T 3i44_A 258 KNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFYNSGQSCNAP----TRMLVEQAIYDKAIKTAKDIAEKTQVG 333 (497)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCTTHHHHHHHHHHGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHhhcCCceeeccCCCCceEECCChhHHHHHHHHHHHHhcCCCCcccC----CEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 0345555 899999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099 98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177 (605)
Q Consensus 98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~ 177 (605)
+|+++++.+||+++..+++++.++|+.+.++|+++.+||....
T Consensus 334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~------------------------------------- 376 (497)
T 3i44_A 334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP------------------------------------- 376 (497)
T ss_dssp CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-------------------------------------
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-------------------------------------
Confidence 9999999999999999999999999999988888888884210
Q ss_pred HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF 257 (605)
Q Consensus 178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl 257 (605)
.....|+|++|||+
T Consensus 377 ------------------------------------------------------------------~~~~~g~~~~PTvl 390 (497)
T 3i44_A 377 ------------------------------------------------------------------MGMERGYYVRPTVF 390 (497)
T ss_dssp ------------------------------------------------------------------TTCCSSCCCCCEEE
T ss_pred ------------------------------------------------------------------CcCCCCcEECCEEE
Confidence 00125899999999
Q ss_pred eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099 258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG 337 (605)
Q Consensus 258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG 337 (605)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+|||
T Consensus 391 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfG 469 (497)
T 3i44_A 391 ADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFG 469 (497)
T ss_dssp ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBC
T ss_pred EeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999994 5557889999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEE
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVT 363 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t 363 (605)
|+|.||+|+++|.+++++|++.|+++
T Consensus 470 G~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 470 GVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp CSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred CcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999999999999875
No 63
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.9e-36 Score=324.28 Aligned_cols=259 Identities=33% Similarity=0.561 Sum_probs=232.5
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999664321100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|+++++++++++++
T Consensus 245 ~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~v 320 (497)
T 3k2w_A 245 KTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCV----ERLYVHASVYDEFMAKFLPLVKGLKV 320 (497)
T ss_dssp HHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCC----cEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 1456666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++..+|+.+.++|+++.+||.....
T Consensus 321 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~----------------------------------- 365 (497)
T 3k2w_A 321 GDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV----------------------------------- 365 (497)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------------------------------------
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCc-----------------------------------
Confidence 999999999999999999999999999999999998888863100
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.....|+|++|||
T Consensus 366 -------------------------------------------------------------------~~~~~g~~~~Ptv 378 (497)
T 3k2w_A 366 -------------------------------------------------------------------EGFEGGCWYEPTV 378 (497)
T ss_dssp ------------------------------------------------------------------------CCCCCCEE
T ss_pred -------------------------------------------------------------------cccCCCceeCCEE
Confidence 0012578999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 379 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~Pf 458 (497)
T 3k2w_A 379 LVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFH 458 (497)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCB
T ss_pred EecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987666789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|+||+|+++|.+++++|++.|+++...
T Consensus 459 GG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 459 NGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp CCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999999999999988774
No 64
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.5e-36 Score=322.56 Aligned_cols=255 Identities=40% Similarity=0.684 Sum_probs=230.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW--------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~--------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+| +.+... ++
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999998 432110 00
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 317 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQ----TRILAPRSRYDEIVAAVTNFVTALPV 317 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEGGGHHHHHHHHHHHHHHSCB
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCC----eEEEEcccHHHHHHHHHHHHHHhcCC
Confidence 1456666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.+.
T Consensus 318 g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~------------------------------------ 361 (495)
T 3b4w_A 318 GPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE------------------------------------ 361 (495)
T ss_dssp CCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT------------------------------------
T ss_pred CCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccc------------------------------------
Confidence 99999999999999999999999999998888888887775310
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
....|+|++|||
T Consensus 362 --------------------------------------------------------------------~~~~g~~~~PTv 373 (495)
T 3b4w_A 362 --------------------------------------------------------------------GLDNGFFIQPTV 373 (495)
T ss_dssp --------------------------------------------------------------------TCTTSCCCCCEE
T ss_pred --------------------------------------------------------------------cccCCceeCCEE
Confidence 001478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+ ..+.+||
T Consensus 374 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~Pf 452 (495)
T 3b4w_A 374 FADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPF 452 (495)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCB
T ss_pred ecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876 7789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|.||+|+++|.+++++|++.|+++...
T Consensus 453 GG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 453 GGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred CCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999987754
No 65
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.4e-36 Score=323.23 Aligned_cols=258 Identities=40% Similarity=0.709 Sum_probs=232.3
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+.+.+..++
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999433211110
Q ss_pred ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG 97 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg 97 (605)
.|.|.++ +|++||+++||+|++++.++++++++|
T Consensus 247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNG----TRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTC----EEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccC----ceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 1356666 999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099 98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177 (605)
Q Consensus 98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~ 177 (605)
+|+++++++||+++..+++++.++|+.+.++|+++.+|| ...+
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~------------------------------------ 365 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPN------------------------------------ 365 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCS------------------------------------
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCc------------------------------------
Confidence 999999999999999999999999999988888888887 3100
Q ss_pred HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF 257 (605)
Q Consensus 178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl 257 (605)
.....|+|++|||+
T Consensus 366 ------------------------------------------------------------------~~~~~g~~~~PTvl 379 (517)
T 3r31_A 366 ------------------------------------------------------------------NVAGEGAYVQPTVF 379 (517)
T ss_dssp ------------------------------------------------------------------SCCSSSBCCCCEEE
T ss_pred ------------------------------------------------------------------ccCCCCceECCEEE
Confidence 00125889999999
Q ss_pred eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099 258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG 337 (605)
Q Consensus 258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG 337 (605)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|||
T Consensus 380 ~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfG 459 (517)
T 3r31_A 380 ADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFG 459 (517)
T ss_dssp EEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBC
T ss_pred ecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877778999999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
|+|.||+|+++|.+++++|++.|+++...
T Consensus 460 G~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 460 GSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp CEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred CcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999988764
No 66
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.7e-36 Score=324.30 Aligned_cols=254 Identities=39% Similarity=0.697 Sum_probs=232.1
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|.+.+....+
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999654321100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|+++++++++++++
T Consensus 258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISG----SRLLVQEGIRDALMERLLDISRKVAF 333 (528)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCC----CEEEEechHHHHHHHHHHHHHHhhcC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.++|+++.+||...
T Consensus 334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~------------------------------------- 376 (528)
T 3u4j_A 334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERI------------------------------------- 376 (528)
T ss_dssp ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEE-------------------------------------
T ss_pred CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC-------------------------------------
Confidence 9999999999999999999999999998888888888777531
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC-CCeeeeee
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPT 255 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Pt 255 (605)
.. .|+|++||
T Consensus 377 ---------------------------------------------------------------------~~~~g~~~~PT 387 (528)
T 3u4j_A 377 ---------------------------------------------------------------------GREAGLYYAPT 387 (528)
T ss_dssp ---------------------------------------------------------------------CTTTSCEECCE
T ss_pred ---------------------------------------------------------------------CCCCCcEecce
Confidence 11 57899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus 388 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~P 467 (528)
T 3u4j_A 388 VFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELP 467 (528)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSC
T ss_pred EEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|+||+|+++|.+++++|++.|+++..
T Consensus 468 fGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 468 IGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp BCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred cCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999998765
No 67
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.2e-35 Score=321.27 Aligned_cols=253 Identities=37% Similarity=0.635 Sum_probs=229.6
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.++++++.++|+|+|++|+|+|++.+....+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 162 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999998653221100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 317 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA----NRLYVQDGVYDRFAEKLQQAMSKLHI 317 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEGGGHHHHHHHHHHHHTTCCB
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCC----cEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.+.|+++.+||..
T Consensus 318 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------------------------------------- 359 (481)
T 3jz4_A 318 GDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA-------------------------------------- 359 (481)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB--------------------------------------
T ss_pred CCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--------------------------------------
Confidence 999999999999999999999999998888888887777743
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
....|+|++|||
T Consensus 360 --------------------------------------------------------------------~~~~g~~~~Ptv 371 (481)
T 3jz4_A 360 --------------------------------------------------------------------HERGGNFFQPTI 371 (481)
T ss_dssp --------------------------------------------------------------------CTTCTTCBCCEE
T ss_pred --------------------------------------------------------------------cCCCCceeccEE
Confidence 112478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 372 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~Pf 451 (481)
T 3jz4_A 372 LVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPF 451 (481)
T ss_dssp EESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCB
T ss_pred EecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987767789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
||+|+||+|+++|.+++++|++.|+++.
T Consensus 452 GG~k~SG~G~~~g~~g~~~~t~~k~v~~ 479 (481)
T 3jz4_A 452 GGIKASGLGREGSKYGIEDYLEIKYMCI 479 (481)
T ss_dssp CCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred CCcccCcCCCCchHHHHHHhhceeEEEE
Confidence 9999999999999999999999998865
No 68
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.3e-35 Score=320.90 Aligned_cols=252 Identities=37% Similarity=0.633 Sum_probs=227.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-hh---------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-YW--------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~~--------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|+++++++ +|+|++|+|+|++.+... ++
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 254 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 4789999999999999999999999999999999999 999999999996543221 10
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 255 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAA----CRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCC----CEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEecchhHHHHHHHHHHHHHhccC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-cEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G-~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
|+|+++++++||+++..+++++.++|+++.++| +++.+||+.
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~------------------------------------- 373 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK------------------------------------- 373 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB-------------------------------------
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcc-------------------------------------
Confidence 999999999999999999999988888887777 777666641
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
.. ..|+|++||
T Consensus 374 --------------------------------------------------------------------~~-~~g~~~~PT 384 (495)
T 1wnd_A 374 --------------------------------------------------------------------RK-GNGYYYAPT 384 (495)
T ss_dssp --------------------------------------------------------------------CS-SSSCCBCCE
T ss_pred --------------------------------------------------------------------cC-CCCCeeCCE
Confidence 11 147889999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus 385 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~P 464 (495)
T 1wnd_A 385 LLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMP 464 (495)
T ss_dssp EEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSC
T ss_pred EEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
|||+|.||+|+++|.+++++|++.|+++.
T Consensus 465 fGG~k~SG~Gr~~G~~gl~~f~~~k~v~~ 493 (495)
T 1wnd_A 465 HGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493 (495)
T ss_dssp BCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred CCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence 99999999999999999999999998865
No 69
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.1e-35 Score=321.88 Aligned_cols=254 Identities=55% Similarity=0.992 Sum_probs=229.4
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|++.+....
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 255 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999965432110
Q ss_pred -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
+ .|.|.++ +|++||+++||+|++++.+++++++
T Consensus 256 ~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAA----SRLFVEESIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCC----CEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----CEEEEchhHHHHHHHHHHHHHHhcC
Confidence 0 0346665 9999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|+++++++||+++..+++++..+|+.+.++|+++.+||+.
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~------------------------------------- 374 (501)
T 1bxs_A 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP------------------------------------- 374 (501)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSE-------------------------------------
T ss_pred CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc-------------------------------------
Confidence 9999999999999999999999999988888777777766642
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
....|+|++||
T Consensus 375 ---------------------------------------------------------------------~~~~g~~~~PT 385 (501)
T 1bxs_A 375 ---------------------------------------------------------------------WGNKGYFIQPT 385 (501)
T ss_dssp ---------------------------------------------------------------------ECSSSCEECCE
T ss_pred ---------------------------------------------------------------------CCCCCCeeCCE
Confidence 11257899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|
T Consensus 386 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~p 465 (501)
T 1bxs_A 386 VFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCP 465 (501)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSC
T ss_pred EEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+|+++|.+++++|++.|+++..
T Consensus 466 fGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 466 FGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp BCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 999999999999999999999999998764
No 70
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.1e-35 Score=321.74 Aligned_cols=254 Identities=54% Similarity=0.972 Sum_probs=229.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|.+.+....
T Consensus 175 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 175 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999865432110
Q ss_pred -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
+ .|.|.++ +|++||+++||+|++++.+++++++
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~ 330 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG----SRTFVQEDIYDEFVERSVARAKSRV 330 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCC----CEEEEehhHHHHHHHHHHHHHHhCc
Confidence 0 1356666 9999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.
T Consensus 331 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~------------------------------------- 373 (500)
T 1o04_A 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------------------------------------- 373 (500)
T ss_dssp BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB-------------------------------------
T ss_pred CCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCcc-------------------------------------
Confidence 9999999999999999999999999998888888887777643
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
....|+|++||
T Consensus 374 ---------------------------------------------------------------------~~~~g~~~~PT 384 (500)
T 1o04_A 374 ---------------------------------------------------------------------AADRGYFIQPT 384 (500)
T ss_dssp ---------------------------------------------------------------------CCSSSSCBCCE
T ss_pred ---------------------------------------------------------------------CCCCCCeeCCE
Confidence 11247899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus 385 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~P 464 (500)
T 1o04_A 385 VFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSP 464 (500)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSC
T ss_pred EEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998766678999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+|+++|.+++++|++.|+++..
T Consensus 465 fGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 465 FGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp BCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 999999999999999999999999998764
No 71
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.4e-35 Score=321.40 Aligned_cols=260 Identities=37% Similarity=0.676 Sum_probs=232.0
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++ .....+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999854 321100
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 251 ~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 326 (503)
T 1a4s_A 251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNG----TRVFVQREIMPQFLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEehHHHHHHHHHHHHHHHhcCC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.....+
T Consensus 327 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~--------------------------------- 373 (503)
T 1a4s_A 327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD--------------------------------- 373 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSS---------------------------------
T ss_pred CCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccc---------------------------------
Confidence 99999999999999999999999999999888888888875310000
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.....|+|++|||
T Consensus 374 -------------------------------------------------------------------~~~~~g~~~~PTv 386 (503)
T 1a4s_A 374 -------------------------------------------------------------------PKLKNGYFMSPCV 386 (503)
T ss_dssp -------------------------------------------------------------------GGGTTSCCBCCEE
T ss_pred -------------------------------------------------------------------ccccCCceeCCEE
Confidence 0002478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+||
T Consensus 387 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf 466 (503)
T 1a4s_A 387 LDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPF 466 (503)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCB
T ss_pred EecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987666788999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|+||+|+++|.+++++|++.|+++...
T Consensus 467 GG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 467 GGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp CCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999999999999987653
No 72
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=9.8e-36 Score=322.52 Aligned_cols=250 Identities=31% Similarity=0.490 Sum_probs=224.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+....
T Consensus 169 ~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 248 (505)
T 3prl_A 169 AAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248 (505)
T ss_dssp HHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999854321100
Q ss_pred ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099 59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD 98 (605)
Q Consensus 59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~ 98 (605)
+ .|.|.++ +|++||+++||+|++++.++++++++|+
T Consensus 249 ~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 249 EKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAI----KRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHCCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSE----EEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccC----ceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 0 1356666 9999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099 99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178 (605)
Q Consensus 99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~ 178 (605)
|+ +++++||+++..+++++.++|+.+.++|+++.+||..
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---------------------------------------- 363 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---------------------------------------- 363 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----------------------------------------
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC----------------------------------------
Confidence 99 9999999999999998888888877777666666531
Q ss_pred HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 258 (605)
Q Consensus 179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~ 258 (605)
.|+|++|||+.
T Consensus 364 ---------------------------------------------------------------------~g~~~~PTvl~ 374 (505)
T 3prl_A 364 ---------------------------------------------------------------------QGNLLSPTLLD 374 (505)
T ss_dssp ---------------------------------------------------------------------ETTEECCEEEE
T ss_pred ---------------------------------------------------------------------CCceeCCeEee
Confidence 46899999999
Q ss_pred ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCCcc
Q psy1099 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAPFG 337 (605)
Q Consensus 259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~pfG 337 (605)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+|||
T Consensus 375 ~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFG 454 (505)
T 3prl_A 375 DVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFL 454 (505)
T ss_dssp SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBC
T ss_pred cCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997654 46889999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|+|+||+|+++|.+++++|++.|+++..
T Consensus 455 G~k~SG~Gr~~g~~~~~~f~~~k~v~~~ 482 (505)
T 3prl_A 455 GVKKSGLGVQGIKPSLLSMTRERVTVLN 482 (505)
T ss_dssp CEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CcCcCCCCcCccHHHHHHhhceEEEEEe
Confidence 9999999999999999999999998765
No 73
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2e-35 Score=318.32 Aligned_cols=254 Identities=31% Similarity=0.476 Sum_probs=230.6
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.++++++.++|+|+|++|+|+|+++.+..++
T Consensus 143 ~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 222 (462)
T 3etf_A 143 VLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGA 222 (462)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998543211100
Q ss_pred ------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccC
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG 97 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg 97 (605)
.|.|.++ +|++||+++||+|+++++++.+++++|
T Consensus 223 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~G 298 (462)
T 3etf_A 223 QAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAA----KRFIVEEGIAQAFTDRFVAAAAALKMG 298 (462)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCC----cEEEEehhHHHHHHHHHHHHHHhhcCC
Confidence 1356666 899999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCC
Q psy1099 98 DPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177 (605)
Q Consensus 98 ~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~ 177 (605)
+|.++++.+||+++..+++++.++++.+.++|+++.+||..
T Consensus 299 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~--------------------------------------- 339 (462)
T 3etf_A 299 DPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEK--------------------------------------- 339 (462)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB---------------------------------------
T ss_pred CCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---------------------------------------
Confidence 99999999999999999999999888888888887777653
Q ss_pred HHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEe
Q psy1099 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF 257 (605)
Q Consensus 178 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl 257 (605)
....|+|++|||+
T Consensus 340 -------------------------------------------------------------------~~~~g~~~~Ptvl 352 (462)
T 3etf_A 340 -------------------------------------------------------------------IAGEGNYYAATVL 352 (462)
T ss_dssp -------------------------------------------------------------------CSSSSCCBCCEEE
T ss_pred -------------------------------------------------------------------cCCCCcEEeeEEE
Confidence 1235789999999
Q ss_pred eccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCcc
Q psy1099 258 SNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFG 337 (605)
Q Consensus 258 ~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pfG 337 (605)
.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|||
T Consensus 353 ~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfG 432 (462)
T 3etf_A 353 ADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFG 432 (462)
T ss_dssp ESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBC
T ss_pred ECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877778899999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|+|.||+|+++|.+++++|++.|+++..
T Consensus 433 G~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 433 GVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp CSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred CcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 9999999999999999999999998765
No 74
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.5e-35 Score=319.61 Aligned_cols=258 Identities=41% Similarity=0.720 Sum_probs=232.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++......
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 468999999999999999999999999999999999999999999999965432110
Q ss_pred --h-----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 59 --W-----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 59 --~-----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
. .|.|.++ +|++||+++||+|+++++++.++++
T Consensus 239 ~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~ 314 (490)
T 2ve5_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNG----TRVFIHRSQQARFEAKVLERVQRIR 314 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCC----CEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCC----CeEEEcHHHHHHHHHHHHHHHHhcc
Confidence 0 1346665 8999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|+++++.+||+++..+++++.++|+.+.++|+++.+||.....
T Consensus 315 ~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~---------------------------------- 360 (490)
T 2ve5_A 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTD---------------------------------- 360 (490)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCT----------------------------------
T ss_pred CCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccccc----------------------------------
Confidence 9999999999999999999999999999999999999888864100
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
.....|+|++||
T Consensus 361 --------------------------------------------------------------------~~~~~g~~~~Pt 372 (490)
T 2ve5_A 361 --------------------------------------------------------------------GAFGKGAYVAPT 372 (490)
T ss_dssp --------------------------------------------------------------------TTGGGTTCBCCE
T ss_pred --------------------------------------------------------------------ccCCCCceEccE
Confidence 001247899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+|
T Consensus 373 vl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~p 452 (490)
T 2ve5_A 373 VFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMP 452 (490)
T ss_dssp EEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSC
T ss_pred EEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+|+++|.+++++|++.|+++..
T Consensus 453 fGG~k~SG~G~~~G~~~~~~f~~~k~v~~~ 482 (490)
T 2ve5_A 453 VGGYKQSGVGRENGLTTLAHYTRIKSVQVE 482 (490)
T ss_dssp BCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred cCCCCCCCCCCcchHHHHHHhheeEEEEEc
Confidence 999999999999999999999999998765
No 75
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=3.3e-35 Score=317.50 Aligned_cols=253 Identities=34% Similarity=0.592 Sum_probs=228.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++++....+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999765422110
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~ 314 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCA----ERVYVQKGIYDQFVNRLGEAMQAVQF 314 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSC----SEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCC----cEEEEehhhHHHHHHHHHHHHHhccc
Confidence 0356665 99999999999999999999999999
Q ss_pred CCCCC-CCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 97 GDPFD-KSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 97 g~~~~-~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
|+|.+ +++++||+++..+++++.++|+.+.++|+++.+||+..
T Consensus 315 g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~------------------------------------ 358 (479)
T 2imp_A 315 GNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV------------------------------------ 358 (479)
T ss_dssp SCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC------------------------------------
T ss_pred CCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc------------------------------------
Confidence 99999 99999999999999999999988888888777776421
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
...|+|++||
T Consensus 359 ----------------------------------------------------------------------~~~g~~~~Pt 368 (479)
T 2imp_A 359 ----------------------------------------------------------------------EGKGYYYPPT 368 (479)
T ss_dssp ----------------------------------------------------------------------CSSSCCCCCE
T ss_pred ----------------------------------------------------------------------CCCCceECCE
Confidence 1247889999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~p 335 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.+|
T Consensus 369 vl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~P 448 (479)
T 2imp_A 369 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGF 448 (479)
T ss_dssp EEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSC
T ss_pred EEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997655578999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
|||+|+||+|+++|.+++++|++.|+++.
T Consensus 449 fGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 449 HAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp BCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred CCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 99999999999999999999999998865
No 76
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.2e-35 Score=316.99 Aligned_cols=249 Identities=35% Similarity=0.553 Sum_probs=224.1
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhh------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYW------------------ 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~------------------ 59 (605)
++|++++||++||+||+||||.+|+++.++++++.++ |+|+|++|+|+|++++....+
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g 226 (486)
T 3pqa_A 147 SAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVG 226 (486)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHH
Confidence 5789999999999999999999999999999999999 999999999999765421100
Q ss_pred ---------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099 60 ---------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR 94 (605)
Q Consensus 60 ---------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~ 94 (605)
.|.|.++ +|++||+++||+|++++.++++++
T Consensus 227 ~~i~~~aa~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~ 302 (486)
T 3pqa_A 227 ELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISV----GMILVDESIADKFIEMFVNKAKVL 302 (486)
T ss_dssp HHHHHHCCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCC----cEEEEeHHHHHHHHHHHHHHHHhc
Confidence 1356666 999999999999999999999999
Q ss_pred ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099 95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174 (605)
Q Consensus 95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~ 174 (605)
++|+|+++++++||+++..+++++.++|+.++++|+++.+||.
T Consensus 303 ~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~------------------------------------- 345 (486)
T 3pqa_A 303 NVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK------------------------------------- 345 (486)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------------------------------------
T ss_pred ccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------------------------------------
Confidence 9999999999999999999999888888877777766666553
Q ss_pred cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099 175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 254 (605)
Q Consensus 175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P 254 (605)
. .|+|++|
T Consensus 346 ---------------------------------------------------------------------~---~g~~~~P 353 (486)
T 3pqa_A 346 ---------------------------------------------------------------------R---DKALFYP 353 (486)
T ss_dssp ---------------------------------------------------------------------E---ETTEECC
T ss_pred ---------------------------------------------------------------------C---CCcEecc
Confidence 1 3689999
Q ss_pred eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCC
Q psy1099 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ 333 (605)
Q Consensus 255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~ 333 (605)
||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.
T Consensus 354 tvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~ 431 (486)
T 3pqa_A 354 TIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDN 431 (486)
T ss_dssp EEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTT
T ss_pred EEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCC
Confidence 999 9999999999999999999999999 999999999999999999999999999999999999999997643 3458
Q ss_pred CCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 334 APFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
+||||+|+||+|+++|.+++++|++.|+++..
T Consensus 432 ~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 432 MPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp SCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 99999999999999999999999999998765
No 77
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.6e-35 Score=318.32 Aligned_cols=261 Identities=40% Similarity=0.682 Sum_probs=232.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++.+....+
T Consensus 179 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999754321110
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++++++++
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 334 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTAS----SRLLVEEKIFEDFVGKVVERARAIRV 334 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC----eEEEEehhHHHHHHHHHHHHHhhccc
Confidence 1456666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|.++++++||+++..+++++.++|+.+.++|+++.+||+.+....
T Consensus 335 g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~--------------------------------- 381 (515)
T 2d4e_A 335 GHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSF--------------------------------- 381 (515)
T ss_dssp CCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCT---------------------------------
T ss_pred CCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccc---------------------------------
Confidence 99999999999999999999999999999999999988886410000
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.+ .....|+|++|||
T Consensus 382 ---------------------------------------------------------~~--------~~~~~g~~~~PTv 396 (515)
T 2d4e_A 382 ---------------------------------------------------------RG--------EDLSRGNYLLPTV 396 (515)
T ss_dssp ---------------------------------------------------------TS--------CBCTTTTCBCCEE
T ss_pred ---------------------------------------------------------cc--------cccCCCceeCCEE
Confidence 00 0002478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..+...+.+||
T Consensus 397 l~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~Pf 475 (515)
T 2d4e_A 397 FVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPF 475 (515)
T ss_dssp EEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCB
T ss_pred EeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCC
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999987767789999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
||+|+||+|+++|.+++++|++.|+++..
T Consensus 476 GG~k~SG~Gr~~G~~gl~~~~~~K~v~~~ 504 (515)
T 2d4e_A 476 GGVKGSGDRREGGTYALDFYTDLKTIALP 504 (515)
T ss_dssp CCSGGGBCSCBSHHHHHHHHEEEEEEEEE
T ss_pred CCcCCCCCCccchHHHHHHhCceeEEEEc
Confidence 99999999999999999999999998764
No 78
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.4e-35 Score=319.49 Aligned_cols=253 Identities=33% Similarity=0.593 Sum_probs=229.4
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------ 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------ 57 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|++.+...
T Consensus 189 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 268 (538)
T 3qan_A 189 MVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268 (538)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999996543210
Q ss_pred -----h------hh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099 58 -----Y------WR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK 90 (605)
Q Consensus 58 -----~------~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~ 90 (605)
. +. |.|.++ +|++||+++||+|++++.++
T Consensus 269 ~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~ 344 (538)
T 3qan_A 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAG----SRAVIHKDVYDEVLEKTVAL 344 (538)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC----CEEEEETTTHHHHHHHHHHH
T ss_pred HHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccC----ceeEEehHHHHHHHHHHHHH
Confidence 0 11 356666 99999999999999999999
Q ss_pred HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099 91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 170 (605)
Q Consensus 91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~ 170 (605)
.+++++|+|.++++++||+++..+++++..+|+.+.++| ++.+||..+
T Consensus 345 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~------------------------------- 392 (538)
T 3qan_A 345 AKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD------------------------------- 392 (538)
T ss_dssp HTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE-------------------------------
T ss_pred HHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC-------------------------------
Confidence 999999999999999999999999999999999888888 877777531
Q ss_pred EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099 171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 250 (605)
Q Consensus 171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 250 (605)
...|+
T Consensus 393 ---------------------------------------------------------------------------~~~g~ 397 (538)
T 3qan_A 393 ---------------------------------------------------------------------------SSTGF 397 (538)
T ss_dssp ---------------------------------------------------------------------------CSSSC
T ss_pred ---------------------------------------------------------------------------CCCCc
Confidence 12589
Q ss_pred eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEe-ccCC
Q psy1099 251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-CYQA 329 (605)
Q Consensus 251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN-~~~~ 329 (605)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| ....
T Consensus 398 ~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~ 477 (538)
T 3qan_A 398 FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTG 477 (538)
T ss_dssp EECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCC
T ss_pred eeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 5544
Q ss_pred c-CCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099 330 V-VPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES 365 (605)
Q Consensus 330 ~-~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s 365 (605)
. .+.+||||+|.||+| +++|.+++++|++.|+++..
T Consensus 478 ~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~ 515 (538)
T 3qan_A 478 AIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM 515 (538)
T ss_dssp CCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEE
T ss_pred CCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEe
Confidence 3 789999999999999 99999999999999998765
No 79
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.8e-35 Score=318.74 Aligned_cols=258 Identities=29% Similarity=0.499 Sum_probs=231.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|++++.++|+|+|++|+|+|+++.+..++
T Consensus 179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998643211100
Q ss_pred ------------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHHHHHHhcCcc
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||++ +||+|++++.++++++++
T Consensus 259 ~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~~~~~~~~v 334 (521)
T 4e4g_A 259 TAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAI----SVAVPVGEETANRLIDKLVPMVESLRI 334 (521)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSE----EEEEEBSHHHHHHHHHHHHHHHHTCCB
T ss_pred HHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccC----eEEEEeCchHHHHHHHHHHHHHHhccC
Confidence 1456666 89999999 999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++|+.+.++|+++.+||.....
T Consensus 335 G~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~----------------------------------- 379 (521)
T 4e4g_A 335 GPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL----------------------------------- 379 (521)
T ss_dssp CCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCC-----------------------------------
T ss_pred CCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCC-----------------------------------
Confidence 999999999999999999999999999999999998888864100
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.....|+|++|||
T Consensus 380 -------------------------------------------------------------------~~~~~g~~~~PTv 392 (521)
T 4e4g_A 380 -------------------------------------------------------------------QGYENGHFIGGCL 392 (521)
T ss_dssp -------------------------------------------------------------------TTCTTSCCCCCEE
T ss_pred -------------------------------------------------------------------CcCCCCcEECCEE
Confidence 0013589999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCc-CCCCC
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAP 335 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~p 335 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||..... .+.+|
T Consensus 393 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~P 472 (521)
T 4e4g_A 393 FDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHS 472 (521)
T ss_dssp EESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSC
T ss_pred EEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999976443 47899
Q ss_pred ccccccCCCc--hHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIG--RELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G--~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+| +++|.+++++|++.|+++..
T Consensus 473 fGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 473 FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp BCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred cCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 9999999999 78999999999999998765
No 80
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=5.2e-35 Score=316.10 Aligned_cols=253 Identities=38% Similarity=0.597 Sum_probs=226.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEec---CCCCCChh-h-------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP---GYGPMSAP-Y------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~---g~~~~~~~-~------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+ |++.+... +
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 468999999999999999999999999999999999999999999999 74321110 0
Q ss_pred ---------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099 59 ---------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA 93 (605)
Q Consensus 59 ---------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~ 93 (605)
+ .|.|.++ +|++||+++||+|+++++++.++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~ 318 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCS----NQFLVQRGIHDAFVKAFAEAMKK 318 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEE----EEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccC----CEEEEcccHHHHHHHHHHHHHHh
Confidence 0 0356665 89999999999999999999999
Q ss_pred -CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEE
Q psy1099 94 -RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 172 (605)
Q Consensus 94 -~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~ 172 (605)
+++|+|+++++++||+++..+++++.++|+.+.++|+++.+||+.
T Consensus 319 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~---------------------------------- 364 (487)
T 2w8n_A 319 NLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR---------------------------------- 364 (487)
T ss_dssp HCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSB----------------------------------
T ss_pred hcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----------------------------------
Confidence 999999999999999999999999988888887777777666642
Q ss_pred EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe-e
Q psy1099 173 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY-F 251 (605)
Q Consensus 173 v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~-~ 251 (605)
. ..|+ |
T Consensus 365 ------------------------------------------------------------------------~-~~g~~~ 371 (487)
T 2w8n_A 365 ------------------------------------------------------------------------H-QLGKNF 371 (487)
T ss_dssp ------------------------------------------------------------------------C-TTCTTC
T ss_pred ------------------------------------------------------------------------C-CCCCce
Confidence 1 1467 8
Q ss_pred eeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcC
Q psy1099 252 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV 331 (605)
Q Consensus 252 ~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~ 331 (605)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......
T Consensus 372 ~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~ 451 (487)
T 2w8n_A 372 FEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS 451 (487)
T ss_dssp BCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC
T ss_pred ECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999866666
Q ss_pred CCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 332 ~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
+.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus 452 ~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 452 VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 7899999999999999999999999999998754
No 81
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.4e-35 Score=317.45 Aligned_cols=251 Identities=27% Similarity=0.460 Sum_probs=225.3
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|+++.+..+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999865211100
Q ss_pred ---h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099 59 ---W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP 99 (605)
Q Consensus 59 ---~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~ 99 (605)
+ .|.|.++ +|++||+++||+|++++.++++++++|+|
T Consensus 254 ~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 254 VGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAI----KLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred hcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCC----cEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 0 1456666 99999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099 100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179 (605)
Q Consensus 100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~ 179 (605)
.++++++||+++..+++++.++|+.+.++|+++.+||+
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~------------------------------------------ 367 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR------------------------------------------ 367 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC------------------------------------------
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc------------------------------------------
Confidence 99999999999999998888888777666666555542
Q ss_pred HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCC-eeeeeeEee
Q psy1099 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFS 258 (605)
Q Consensus 180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~ 258 (605)
. .| +|++|||+.
T Consensus 368 ----------------------------------------------------------------~---~g~~~~~Ptvl~ 380 (501)
T 1uxt_A 368 ----------------------------------------------------------------R---LGPTYVQPTFVE 380 (501)
T ss_dssp ----------------------------------------------------------------B---CSSSCBCCEEEE
T ss_pred ----------------------------------------------------------------c---CCCceECCEEEe
Confidence 2 36 788999999
Q ss_pred ccC---cchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc-CCcCCCC
Q psy1099 259 NVT---DDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY-QAVVPQA 334 (605)
Q Consensus 259 ~v~---~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~-~~~~~~~ 334 (605)
+++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.. +...+.+
T Consensus 381 ~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~ 460 (501)
T 1uxt_A 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYY 460 (501)
T ss_dssp CCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSS
T ss_pred CCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCC
Confidence 999 999999999999999999999999999999999999999999999999999999999999999987 6667899
Q ss_pred CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 335 PFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
||||+|+||+|+++|.+++++|++.|+++..
T Consensus 461 PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 491 (501)
T 1uxt_A 461 PFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 491 (501)
T ss_dssp CBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred CCCCcCCCCCCccChHHHHHHhCceeEEEEe
Confidence 9999999999999999999999999998765
No 82
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.7e-35 Score=314.80 Aligned_cols=255 Identities=40% Similarity=0.697 Sum_probs=210.0
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++......+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999654322110
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +|++||+++||+|++++.++.+++++
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 311 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAG----TRVLVPNKIKDAFLAELKEQFSQVRV 311 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCC----CEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCC----CeEEEcHHHHHHHHHHHHHHHHhccC
Confidence 1356666 99999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++.+||+++..+++++.++|+.+.+.|+++.+||....
T Consensus 312 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~------------------------------------ 355 (478)
T 3ty7_A 312 GNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP------------------------------------ 355 (478)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC------------------------------------
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc------------------------------------
Confidence 99999999999999999999999999999888888888874210
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
.....|+|++|||
T Consensus 356 -------------------------------------------------------------------~~~~~g~~~~Ptv 368 (478)
T 3ty7_A 356 -------------------------------------------------------------------EGLEKGYFARPTI 368 (478)
T ss_dssp -------------------------------------------------------------------TTCCSSCCCCCEE
T ss_pred -------------------------------------------------------------------cccCCCceeCCEE
Confidence 0012588999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCCCCc
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPF 336 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~pf 336 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. +...+.+||
T Consensus 369 l~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~Pf 447 (478)
T 3ty7_A 369 FINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPF 447 (478)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-------
T ss_pred EecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 666788999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
||+|+||+|+++|.+++++|++.|+++.
T Consensus 448 GG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 448 GGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp ---------------CCGGGEEEEEEET
T ss_pred CCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999998874
No 83
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=8.9e-35 Score=315.23 Aligned_cols=254 Identities=27% Similarity=0.443 Sum_probs=224.7
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHH----cCCCCccEEEecCCCCCChhhh------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQ----AGFPDGVISVLPGYGPMSAPYW------------------ 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~----aGlP~gvv~vv~g~~~~~~~~~------------------ 59 (605)
++|++++||++||+||+||||.+|+++.++++++.+ +|+|+|++|+|+|+.+.+..++
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~ 253 (500)
T 2j6l_A 174 YGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGK 253 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHH
Confidence 478999999999999999999999999999988775 5999999999998322111000
Q ss_pred ----------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099 60 ----------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA 93 (605)
Q Consensus 60 ----------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~ 93 (605)
.|.|.++ +|++||+++||+|++++.+.+++
T Consensus 254 ~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~ 329 (500)
T 2j6l_A 254 QVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTA----RRLFIHESIHDEVVNRLKKAYAQ 329 (500)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEETTTHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCC----cEEEEcHHHHHHHHHHHHHHhhh
Confidence 1456666 99999999999999999999999
Q ss_pred CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099 94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 173 (605)
Q Consensus 94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v 173 (605)
+++|+|.++++++||+++..+++++.++|+.+.++|+++.+||+.
T Consensus 330 ~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~----------------------------------- 374 (500)
T 2j6l_A 330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV----------------------------------- 374 (500)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSB-----------------------------------
T ss_pred cccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcc-----------------------------------
Confidence 999999999999999999999999999998888888877777743
Q ss_pred ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099 174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE 253 (605)
Q Consensus 174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~ 253 (605)
....|+|++
T Consensus 375 -----------------------------------------------------------------------~~~~g~~~~ 383 (500)
T 2j6l_A 375 -----------------------------------------------------------------------MDRPGNYVE 383 (500)
T ss_dssp -----------------------------------------------------------------------CSSSSSCBC
T ss_pred -----------------------------------------------------------------------cCCCCCEEc
Confidence 112478999
Q ss_pred eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHH--HHhhcccEEEeccCC-c
Q psy1099 254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA--HAINAGSVWINCYQA-V 330 (605)
Q Consensus 254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~--~~~~~g~v~iN~~~~-~ 330 (605)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ +++++|+|+||.... .
T Consensus 384 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~ 463 (500)
T 2j6l_A 384 PTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGA 463 (500)
T ss_dssp CEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCC
T ss_pred CEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999 779999999997543 3
Q ss_pred CCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 331 ~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
.+.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus 464 ~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 464 EIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp CTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred CCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 56899999999999999999999999999998753
No 84
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9.2e-35 Score=314.79 Aligned_cols=251 Identities=32% Similarity=0.497 Sum_probs=205.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCC-hhh---------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMS-APY--------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~-~~~--------------------- 58 (605)
++|++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|++++. ..+
T Consensus 160 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 160 SMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 578999999999999999999999999 999999999999999999999865421 100
Q ss_pred -------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 59 -------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 59 -------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
+ .|.|.++ +|++||+++||+|++++.++.++++
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~ 315 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII----NRIIVHQDVYDEFVEKFTARVKQLP 315 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCE----EEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccC----CEEEEeHHHHHHHHHHHHHHHHhcc
Confidence 0 1356666 8999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEec
Q psy1099 96 VGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 175 (605)
Q Consensus 96 vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~ 175 (605)
+|+|.++++.+||+++..+++++.++++.+.++|+++.+||.
T Consensus 316 ~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~-------------------------------------- 357 (485)
T 4dng_A 316 YGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------------------------------------- 357 (485)
T ss_dssp BSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC--------------------------------------
T ss_pred CCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC--------------------------------------
Confidence 999999999999999999988888888777776666665553
Q ss_pred CCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeee
Q psy1099 176 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPT 255 (605)
Q Consensus 176 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 255 (605)
. .|+|++||
T Consensus 358 --------------------------------------------------------------------~---~g~~~~Pt 366 (485)
T 4dng_A 358 --------------------------------------------------------------------R---VGNVLTPY 366 (485)
T ss_dssp --------------------------------------------------------------------E---ETTEECCE
T ss_pred --------------------------------------------------------------------C---CCcEECCE
Confidence 2 47899999
Q ss_pred EeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCC
Q psy1099 256 VFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQA 334 (605)
Q Consensus 256 vl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~ 334 (605)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+
T Consensus 367 vl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~ 446 (485)
T 4dng_A 367 VFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNI 446 (485)
T ss_dssp EEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC--------
T ss_pred EEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997653 47889
Q ss_pred CccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 335 PFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 335 pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
||||+|.||+|+++|.+++++|++.|+++..
T Consensus 447 pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 477 (485)
T 4dng_A 447 AFGGNKASGVGRFGNPWVVEEFTVTKWISIQ 477 (485)
T ss_dssp --------------CHHHHHHHEEEEEEEEE
T ss_pred CcCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999998765
No 85
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.6e-35 Score=315.99 Aligned_cols=251 Identities=34% Similarity=0.542 Sum_probs=208.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhH-HHHHHHHHHcCCCCccEEEecCCCCCChh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYGPMSAP----------------------- 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~-~~l~~ll~~aGlP~gvv~vv~g~~~~~~~----------------------- 57 (605)
++|++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+...
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 468999999999999999999999999 99999999999999999999997543211
Q ss_pred --------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhc
Q psy1099 58 --------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAA 93 (605)
Q Consensus 58 --------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~ 93 (605)
.+ .|.|.++ +|++||+++||+|++++.+++++
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~ 320 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSI----NRVIVDAAVHDEFLEKFVEAVKN 320 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCC----SEEEEEHHHHHHHHHHHHHHHHT
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccC----cEEEEehhHHHHHHHHHHHHHHh
Confidence 00 0346665 99999999999999999999999
Q ss_pred CccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEE
Q psy1099 94 RKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 173 (605)
Q Consensus 94 ~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v 173 (605)
+++|+|.++++++||+++..+++++.++|+.+.++|+++.+||.
T Consensus 321 ~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~------------------------------------ 364 (508)
T 3r64_A 321 IPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP------------------------------------ 364 (508)
T ss_dssp CCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCC------------------------------------
T ss_pred ccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCC------------------------------------
Confidence 99999999999999999999988888887777666666655553
Q ss_pred ecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeee
Q psy1099 174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE 253 (605)
Q Consensus 174 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~ 253 (605)
. .|+|++
T Consensus 365 ----------------------------------------------------------------------~---~g~~~~ 371 (508)
T 3r64_A 365 ----------------------------------------------------------------------I---EGRLVH 371 (508)
T ss_dssp ----------------------------------------------------------------------E---ETTEEC
T ss_pred ----------------------------------------------------------------------C---CCcEEe
Confidence 2 468999
Q ss_pred eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCC
Q psy1099 254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVP 332 (605)
Q Consensus 254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~ 332 (605)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+
T Consensus 372 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~ 451 (508)
T 3r64_A 372 PHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEP 451 (508)
T ss_dssp CEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-------
T ss_pred cEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997653 378
Q ss_pred CCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 333 QAPFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 333 ~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
.+||||+|.||+|+++|.+++++|++.|+++..
T Consensus 452 ~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~ 484 (508)
T 3r64_A 452 HVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK 484 (508)
T ss_dssp -------------CCCHHHHHHHTEEEEEEEEE
T ss_pred CCCcCCcCCCCCCcCccHHHHHHhhceEEEEEe
Confidence 899999999999999999999999999988765
No 86
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=9.2e-35 Score=312.41 Aligned_cols=247 Identities=26% Similarity=0.405 Sum_probs=218.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.++++++.++ +|+|++|+|+|+++.+..++
T Consensus 137 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~ 215 (469)
T 3sza_A 137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTA 215 (469)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHH
Confidence 5789999999999999999999999999999999998 99999999998543211100
Q ss_pred -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099 60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD 98 (605)
Q Consensus 60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~ 98 (605)
.|.|.++ +|++||+++||+|++++.++++++ +|+
T Consensus 216 aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~-~g~ 290 (469)
T 3sza_A 216 AAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAP----DYILCDPSIQNQIVEKLKKSLKEF-YGE 290 (469)
T ss_dssp HHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSC----CEEEECGGGHHHHHHHHHHHHHHH-HCS
T ss_pred HhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC----cEEEEehhHHHHHHHHHHHHHHHh-cCC
Confidence 1456666 999999999999999999999887 699
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099 99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178 (605)
Q Consensus 99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~ 178 (605)
|.++++++||+++..+++++.++| +|+++.+||.
T Consensus 291 ~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~----------------------------------------- 324 (469)
T 3sza_A 291 DAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT----------------------------------------- 324 (469)
T ss_dssp CGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC-----------------------------------------
T ss_pred CCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc-----------------------------------------
Confidence 999999999999999988887766 4556555553
Q ss_pred HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 258 (605)
Q Consensus 179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~ 258 (605)
.. ..|+|++|||+.
T Consensus 325 -----------------------------------------------------------------~~-~~g~~~~PTvl~ 338 (469)
T 3sza_A 325 -----------------------------------------------------------------GD-AATRYIAPTILT 338 (469)
T ss_dssp -----------------------------------------------------------------EE-TTTTEECCEEEE
T ss_pred -----------------------------------------------------------------cC-CCCceeCCeeec
Confidence 21 257899999999
Q ss_pred ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--CcCCCCCc
Q psy1099 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPF 336 (605)
Q Consensus 259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~~~~~pf 336 (605)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||... ...+.+||
T Consensus 339 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~Pf 418 (469)
T 3sza_A 339 DVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPF 418 (469)
T ss_dssp SCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCB
T ss_pred CCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999754 44689999
Q ss_pred cccccCCCchHHhHHhhhcccceeEEEecC
Q psy1099 337 GGFKESGIGRELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 337 GG~~~SG~G~~~G~~~~~~~~~~k~~t~s~ 366 (605)
||+|+||+|+++|.+++++|++.|+++..+
T Consensus 419 GG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 419 GGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp CCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred CCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999999999999999999999988764
No 87
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.1e-34 Score=313.19 Aligned_cols=256 Identities=29% Similarity=0.442 Sum_probs=230.5
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++..+++++.++|+|+|++|+++|+.+.+..++
T Consensus 143 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~a 222 (474)
T 4h7n_A 143 SMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETA 222 (474)
T ss_dssp HHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHH
T ss_pred HhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhh
Confidence 5789999999999999999999999999999999999999999999998644321100
Q ss_pred ----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCCC
Q psy1099 60 ----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP 99 (605)
Q Consensus 60 ----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~~ 99 (605)
.|.|.++ +|++||+++|++|++++++...++++|+|
T Consensus 223 a~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 298 (474)
T 4h7n_A 223 ARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSI----ERIYVAESKFEEFYHQLIAKAHRLQLAYP 298 (474)
T ss_dssp HHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHHHHHCCBCCS
T ss_pred hcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeec----ccccchHHHHHHHHHHHHHHhhccccCCC
Confidence 1456666 99999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHH
Q psy1099 100 FDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179 (605)
Q Consensus 100 ~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~ 179 (605)
.++++.+||+++..+.+++..+++.+.++|+++..||...
T Consensus 299 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~---------------------------------------- 338 (474)
T 4h7n_A 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE---------------------------------------- 338 (474)
T ss_dssp SGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCE----------------------------------------
T ss_pred cccccccCccccHHHHHHHHHHHHHHHhhCceeccCCccc----------------------------------------
Confidence 9999999999999999999999999998888888887531
Q ss_pred HHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEeec
Q psy1099 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSN 259 (605)
Q Consensus 180 ~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~ 259 (605)
....|+|++|||+.+
T Consensus 339 -----------------------------------------------------------------~~~~g~~~~Ptv~~~ 353 (474)
T 4h7n_A 339 -----------------------------------------------------------------ELGGGWWCRPTVMTN 353 (474)
T ss_dssp -----------------------------------------------------------------EETTEEECCCEEEES
T ss_pred -----------------------------------------------------------------ccCCCcccCceeEEe
Confidence 013589999999999
Q ss_pred cCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCCcc
Q psy1099 260 VTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAPFG 337 (605)
Q Consensus 260 v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~pfG 337 (605)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.. +...+..|||
T Consensus 354 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfg 433 (474)
T 4h7n_A 354 VNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKN 433 (474)
T ss_dssp CCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCC
T ss_pred eccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999964 3446789999
Q ss_pred ccccCCCc-hHHhHHhhhcccceeEEEecC
Q psy1099 338 GFKESGIG-RELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 338 G~~~SG~G-~~~G~~~~~~~~~~k~~t~s~ 366 (605)
|+|.||+| +++|.+++++|++.|+++...
T Consensus 434 G~~~SG~G~~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 434 AFNFSGLGGSRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp CCGGGEESCCSSTTHHHHTTEEEEEEEEEC
T ss_pred CcCCCCCCCCcchHHHHHHhCeEEEEEECC
Confidence 99999998 788999999999999987653
No 88
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1e-34 Score=313.42 Aligned_cols=250 Identities=32% Similarity=0.479 Sum_probs=223.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh-h----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP-Y---------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~-~---------------------- 58 (605)
++|++++||++||+||+||||.+|+++.+++++++++|+|+|++|+|+|++.+... +
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 46899999999999999999999999999999999999999999999986432110 0
Q ss_pred ----h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099 59 ----W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD 98 (605)
Q Consensus 59 ----~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~ 98 (605)
+ .|.|.++ +|++||+++|++|++++.++++++++|+
T Consensus 240 ~~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~----~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAV----KRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSE----EEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HhcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCC----cEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 0 1356666 9999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099 99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178 (605)
Q Consensus 99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~ 178 (605)
|.+ ++++||+++..+++++.++++.+.++|+++.+||+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~----------------------------------------- 353 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK----------------------------------------- 353 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-----------------------------------------
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCc-----------------------------------------
Confidence 999 99999999999999888888777666666555442
Q ss_pred HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 258 (605)
Q Consensus 179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~ 258 (605)
. .|+|++|||+.
T Consensus 354 -----------------------------------------------------------------~---~g~~~~Ptvl~ 365 (475)
T 1euh_A 354 -----------------------------------------------------------------R---EGNLICPILFD 365 (475)
T ss_dssp -----------------------------------------------------------------E---ETTEECCEEEE
T ss_pred -----------------------------------------------------------------c---CCceeCCEEEe
Confidence 2 36889999999
Q ss_pred ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEec-cCCcCCCCCcc
Q psy1099 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC-YQAVVPQAPFG 337 (605)
Q Consensus 259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~pfG 337 (605)
+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. +....+.+|||
T Consensus 366 ~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfG 445 (475)
T 1euh_A 366 KVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFL 445 (475)
T ss_dssp SCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBC
T ss_pred CCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 66557899999
Q ss_pred ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 338 GFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 338 G~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|+|.||+|+++|.+++++|++.|+++..
T Consensus 446 G~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 446 GAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp CEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999988754
No 89
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.5e-33 Score=308.05 Aligned_cols=253 Identities=27% Similarity=0.471 Sum_probs=224.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------ 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------ 57 (605)
.+|+++||| +||+||||||+.+|+++.+|+++|++||+|+|++|+|+|++.+...
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 368999999 6999999999999999999999999999999999999986432110
Q ss_pred -----h---------h---------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099 58 -----Y---------W---------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK 90 (605)
Q Consensus 58 -----~---------~---------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~ 90 (605)
. + .|.|.++ +|+|||+++||+|+++|+++
T Consensus 296 ~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~----~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 296 RQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSAC----SRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCC----cEEEEecchHHHHHHHHHHH
Confidence 0 0 1356666 99999999999999999999
Q ss_pred HhcCccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-cCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099 91 AAARKVGDP-FDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 168 (605)
Q Consensus 91 ~~~~~vg~~-~~~~~~~gp~i~~~~~~~~~~~i~~a~~-~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp 168 (605)
++++++|+| +++++++||+|++.+++++..+|+.+.+ .|+++..||..
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~------------------------------ 421 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQC------------------------------ 421 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCE------------------------------
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCcc------------------------------
Confidence 999999999 9999999999999999999999988875 67777777643
Q ss_pred eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248 (605)
Q Consensus 169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 248 (605)
....
T Consensus 422 ----------------------------------------------------------------------------~~~~ 425 (563)
T 4e3x_A 422 ----------------------------------------------------------------------------NESV 425 (563)
T ss_dssp ----------------------------------------------------------------------------ECSS
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 1236
Q ss_pred CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhh-cCCCcceeEEEecCChHHHHHHHHHhh--cccEE
Q psy1099 249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERA-NDTKYGLASGIVTTNIDTANTFAHAIN--AGSVW 323 (605)
Q Consensus 249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~-n~~~~glaa~vft~d~~~~~~~~~~~~--~g~v~ 323 (605)
|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+
T Consensus 426 G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~ 505 (563)
T 4e3x_A 426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFY 505 (563)
T ss_dssp SCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEE
T ss_pred CcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEE
Confidence 89999999999999999999999999999999997 79999999 799999999999999999999999976 99999
Q ss_pred EeccC--CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEec
Q psy1099 324 INCYQ--AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTES 365 (605)
Q Consensus 324 iN~~~--~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s 365 (605)
||... ...+.+||||+|.||+| +++|..+++.|+..|+++..
T Consensus 506 IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~ 550 (563)
T 4e3x_A 506 INDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET 550 (563)
T ss_dssp ESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred EcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence 99643 44678999999999998 88999999999999998775
No 90
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-33 Score=305.96 Aligned_cols=254 Identities=34% Similarity=0.555 Sum_probs=226.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|+.+.+..++
T Consensus 158 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 158 PCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998532211100
Q ss_pred ------------------------------------------hhhcCCcccccce-eEeccccHHHHHHHHHHHHhcCcc
Q psy1099 60 ------------------------------------------RKSCLSPLAYRSR-TYVQEDIYDTFVKKAVEKAAARKV 96 (605)
Q Consensus 60 ------------------------------------------~~~~~~~~~~~~~-~~v~~~i~~~~~~~l~~~~~~~~v 96 (605)
.|.|.++ +| ++||++ ||+|+++++++++++++
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvv~v~~~-~d~f~~~l~~~~~~~~v 312 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMAC----AVVTVEEGI-ADEFMAKLQEKVADIKI 312 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE----EEEEEEHHH-HHHHHHHHHHHHTTCCB
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccC----CeeEEecCC-HHHHHHHHHHHHHhccc
Confidence 1356666 89 999999 99999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecC
Q psy1099 97 GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176 (605)
Q Consensus 97 g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~ 176 (605)
|+|+++++++||+++..+++++.++++.+.++|+++.+||...
T Consensus 313 G~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~------------------------------------- 355 (486)
T 1t90_A 313 GNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN------------------------------------- 355 (486)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS-------------------------------------
T ss_pred CCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC-------------------------------------
Confidence 9999999999999999999999999998888888887777521
Q ss_pred CHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeE
Q psy1099 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTV 256 (605)
Q Consensus 177 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 256 (605)
....|+|++|||
T Consensus 356 --------------------------------------------------------------------~~~~g~~~~Ptv 367 (486)
T 1t90_A 356 --------------------------------------------------------------------VSDDGYFVGPTI 367 (486)
T ss_dssp --------------------------------------------------------------------CCSSSSCCCCEE
T ss_pred --------------------------------------------------------------------CCCCCCEECCEE
Confidence 012478999999
Q ss_pred eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCCCC
Q psy1099 257 FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQAP 335 (605)
Q Consensus 257 l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~p 335 (605)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.+|
T Consensus 368 l~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~P 447 (486)
T 1t90_A 368 FDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFP 447 (486)
T ss_dssp EESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSC
T ss_pred EeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997533 357899
Q ss_pred ccccccCCCc--hHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIG--RELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G--~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+| +++|.+++++|++.|+++..
T Consensus 448 fGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 448 FSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp CCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 9999999999 89999999999999998764
No 91
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.4e-33 Score=307.13 Aligned_cols=251 Identities=35% Similarity=0.592 Sum_probs=222.4
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCCh-------------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA------------------------- 56 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~------------------------- 56 (605)
++|++++||++||+||+||||.+|+++.+|+++++++|+|+|++|+|+|++.+..
T Consensus 190 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~ 269 (516)
T 1uzb_A 190 FTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269 (516)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998653210
Q ss_pred --hh--------hh------------------------------------hhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099 57 --PY--------WR------------------------------------KSCLSPLAYRSRTYVQEDIYDTFVKKAVEK 90 (605)
Q Consensus 57 --~~--------~~------------------------------------~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~ 90 (605)
.. +. |.|.++ +|++||+++||+|++++.++
T Consensus 270 ~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~ 345 (516)
T 1uzb_A 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA----SRLILTQGAYEPVLERVLKR 345 (516)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHH
T ss_pred HHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccC----cEEEEchHHHHHHHHHHHHH
Confidence 00 10 345555 89999999999999999999
Q ss_pred HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099 91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 170 (605)
Q Consensus 91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~ 170 (605)
++++++|+| ++++++||+++..+++++.++|+.+.++| ++.+||..
T Consensus 346 ~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~-------------------------------- 391 (516)
T 1uzb_A 346 AERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR-------------------------------- 391 (516)
T ss_dssp HTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSB--------------------------------
T ss_pred HHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCcc--------------------------------
Confidence 999999999 99999999999999999998888887776 66666642
Q ss_pred EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099 171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 250 (605)
Q Consensus 171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 250 (605)
....|+
T Consensus 392 --------------------------------------------------------------------------~~~~g~ 397 (516)
T 1uzb_A 392 --------------------------------------------------------------------------LEGEGY 397 (516)
T ss_dssp --------------------------------------------------------------------------CSSSSC
T ss_pred --------------------------------------------------------------------------CCCCCc
Confidence 112478
Q ss_pred eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEecc--C
Q psy1099 251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--Q 328 (605)
Q Consensus 251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~ 328 (605)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.. +
T Consensus 398 ~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~ 477 (516)
T 1uzb_A 398 FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITG 477 (516)
T ss_dssp CBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred EECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964 3
Q ss_pred CcCCCCCccccccCCCc-hHHhHHhhhcccceeEEEe
Q psy1099 329 AVVPQAPFGGFKESGIG-RELGKAALDEYTELKTVTE 364 (605)
Q Consensus 329 ~~~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~ 364 (605)
...+.+||||+|.||+| +++|..++++|++.|+++.
T Consensus 478 ~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~ 514 (516)
T 1uzb_A 478 ALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp CCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred CCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence 34678999999999999 4788999999999998865
No 92
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.9e-33 Score=305.06 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=225.6
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcC-CCCccEEEecCCCCCChh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSAP----------------------- 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aG-lP~gvv~vv~g~~~~~~~----------------------- 57 (605)
++|++++||++||+||+||||.+|+++.++++++.++| +|+|++|+|+|++.....
T Consensus 168 ~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l~~vd~V~FTGS~~~G~~i~~~ 247 (534)
T 2y53_A 168 LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAH 247 (534)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGCCTTCEEEEESCHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcccccCEEEEECCHHHHHHHHHh
Confidence 46899999999999999999999999999999999999 899999999986542100
Q ss_pred -------------------------------hh---------------hhhcCCcccccceeEeccccHHHHHHHHHHHH
Q psy1099 58 -------------------------------YW---------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA 91 (605)
Q Consensus 58 -------------------------------~~---------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~ 91 (605)
.+ .|.|.++ +|++||+++||+|++++++++
T Consensus 248 aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~ 323 (534)
T 2y53_A 248 PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAI----RRAFVPEAALEPVLEALKAKL 323 (534)
T ss_dssp HHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSE----EEEEEEGGGHHHHHHHHHHHH
T ss_pred hhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCC----CEEEEeccHHHHHHHHHHHHH
Confidence 00 1345555 899999999999999999999
Q ss_pred hcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeE
Q psy1099 92 AARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT 171 (605)
Q Consensus 92 ~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~ 171 (605)
+++++|+|+++++++||+++..+++++.++|+.+ ++|+++.+||+... ..
T Consensus 324 ~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~---------~~-------------------- 373 (534)
T 2y53_A 324 AKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVP---------LI-------------------- 373 (534)
T ss_dssp TTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSC---------CB--------------------
T ss_pred HhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccc---------cc--------------------
Confidence 9999999999999999999999999999999988 67888888875310 00
Q ss_pred EEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCee
Q psy1099 172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYF 251 (605)
Q Consensus 172 ~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 251 (605)
+ .....|+|
T Consensus 374 ---------------------------------------------------------------------~--~~~~~g~~ 382 (534)
T 2y53_A 374 ---------------------------------------------------------------------D--ADANIAAC 382 (534)
T ss_dssp ---------------------------------------------------------------------S--CCTTTSCC
T ss_pred ---------------------------------------------------------------------c--ccCCCCce
Confidence 0 00124789
Q ss_pred eeeeEeeccCcc--hhhhhhhhcCceEEeEecC---CH-----HHHHHhhcCCCcceeEEEecCChHHHHHHHHHh--hc
Q psy1099 252 IEPTVFSNVTDD--FKIAREEIFGPVQTIIKFK---TL-----DEVIERANDTKYGLASGIVTTNIDTANTFAHAI--NA 319 (605)
Q Consensus 252 ~~Ptvl~~v~~~--~~i~~eE~FgPvl~i~~~~---d~-----~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~--~~ 319 (605)
++|||+.+++++ +++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++
T Consensus 383 ~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~a 462 (534)
T 2y53_A 383 VAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSH 462 (534)
T ss_dssp CCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTE
T ss_pred ecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 999999999988 5899999999999999999 99 999999999999999999999999999999999 89
Q ss_pred ccEEEeccC---------CcCCCCCccccccCCCchH-HhHHhhhcccceeEEEecC
Q psy1099 320 GSVWINCYQ---------AVVPQAPFGGFKESGIGRE-LGKAALDEYTELKTVTESP 366 (605)
Q Consensus 320 g~v~iN~~~---------~~~~~~pfGG~~~SG~G~~-~G~~~~~~~~~~k~~t~s~ 366 (605)
|+|+||... ...+.+||||+|.||+|++ +|..++++|++.|++...+
T Consensus 463 G~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 463 GRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp EEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred CEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 999999643 2357899999999999999 6899999999999998875
No 93
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=99.98 E-value=9.2e-33 Score=296.68 Aligned_cols=244 Identities=22% Similarity=0.371 Sum_probs=212.5
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhhh----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW---------------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~~---------------------- 59 (605)
++|++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.+..++
T Consensus 147 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~ 225 (457)
T 3lns_A 147 TLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQA 225 (457)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHH
Confidence 5789999999999999999999999999999999998 99999999998432211000
Q ss_pred -----------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcCccCC
Q psy1099 60 -----------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGD 98 (605)
Q Consensus 60 -----------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~vg~ 98 (605)
.|.|.++ +|++||+++||+|++++.++++.++
T Consensus 226 aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~--- 298 (457)
T 3lns_A 226 AAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAP----DYLYVHYSVKDALLERLVERVKTEL--- 298 (457)
T ss_dssp HHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSE----EEEEEEGGGHHHHHHHHHHHHHHHC---
T ss_pred HhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCC----ceEEEcHHHHHHHHHHHHHHHHhcC---
Confidence 1356666 8999999999999999999998887
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCH
Q psy1099 99 PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178 (605)
Q Consensus 99 ~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~ 178 (605)
|.+. .+||+++..+++++.++|+.+. +++.+||.
T Consensus 299 p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~----------------------------------------- 332 (457)
T 3lns_A 299 PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQ----------------------------------------- 332 (457)
T ss_dssp CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCC-----------------------------------------
T ss_pred CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCc-----------------------------------------
Confidence 6665 9999999999888887776531 34444443
Q ss_pred HHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeeeeEee
Q psy1099 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 258 (605)
Q Consensus 179 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~ 258 (605)
.. ..|+|++|||+.
T Consensus 333 -----------------------------------------------------------------~~-~~g~~~~Ptvl~ 346 (457)
T 3lns_A 333 -----------------------------------------------------------------AD-VSKRALSATVVD 346 (457)
T ss_dssp -----------------------------------------------------------------EE-GGGTEECCEEEE
T ss_pred -----------------------------------------------------------------cC-CCCceeCCEEEe
Confidence 21 247899999999
Q ss_pred ccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcC-CCcceeEEEecCChHHHHHHHHHhhcccEEEecc--CCcCCCCC
Q psy1099 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND-TKYGLASGIVTTNIDTANTFAHAINAGSVWINCY--QAVVPQAP 335 (605)
Q Consensus 259 ~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~-~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~--~~~~~~~p 335 (605)
+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||.. +...+.+|
T Consensus 347 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~P 426 (457)
T 3lns_A 347 GVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426 (457)
T ss_dssp SCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSC
T ss_pred cCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999975 34578999
Q ss_pred ccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 336 FGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 336 fGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|||+|.||+|+++|.+++++|++.|+++..
T Consensus 427 fGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 427 FGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp BCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred cCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999998764
No 94
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=99.98 E-value=4.8e-32 Score=311.85 Aligned_cols=254 Identities=29% Similarity=0.503 Sum_probs=226.5
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChh------------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAP------------------------ 57 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~------------------------ 57 (605)
++|++++||++||+||+|||+.+|+++.++++++++||+|+|++|+|+|++.+...
T Consensus 683 ~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~ 762 (1026)
T 4f9i_A 683 SMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII 762 (1026)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999986432100
Q ss_pred -----------hh------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHH
Q psy1099 58 -----------YW------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEK 90 (605)
Q Consensus 58 -----------~~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~ 90 (605)
.+ .|.|.++ +|++||+++|++|++++++.
T Consensus 763 ~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~----~rl~V~~~i~d~f~~~L~~~ 838 (1026)
T 4f9i_A 763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSAC----SRVIVLDAVYDKFIERLVSM 838 (1026)
T ss_dssp HHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEGGGHHHHHHHHHHH
T ss_pred HHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCC----ceEEecHHHHHHHHHHHHHH
Confidence 00 1356666 89999999999999999999
Q ss_pred HhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccccee
Q psy1099 91 AAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 170 (605)
Q Consensus 91 ~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~ 170 (605)
++++++|+|.++++++||+|+..+++++..+|+.+.+.| ++.+||..
T Consensus 839 ~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~-------------------------------- 885 (1026)
T 4f9i_A 839 AKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPV-------------------------------- 885 (1026)
T ss_dssp HHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCC--------------------------------
T ss_pred HHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCc--------------------------------
Confidence 999999999999999999999999999999999888877 77666642
Q ss_pred EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCe
Q psy1099 171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 250 (605)
Q Consensus 171 ~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 250 (605)
....|+
T Consensus 886 --------------------------------------------------------------------------~~~~G~ 891 (1026)
T 4f9i_A 886 --------------------------------------------------------------------------PAGEGY 891 (1026)
T ss_dssp --------------------------------------------------------------------------CSSSSC
T ss_pred --------------------------------------------------------------------------CCCCCc
Confidence 112488
Q ss_pred eeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--
Q psy1099 251 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ-- 328 (605)
Q Consensus 251 ~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~-- 328 (605)
|++|||+.++++++++++||+|||||+|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||...
T Consensus 892 fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~ 971 (1026)
T 4f9i_A 892 FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTG 971 (1026)
T ss_dssp CCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred eecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred CcCCCCCccccccCCCch-HHhHHhhhcccceeEEEecC
Q psy1099 329 AVVPQAPFGGFKESGIGR-ELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 329 ~~~~~~pfGG~~~SG~G~-~~G~~~~~~~~~~k~~t~s~ 366 (605)
...+.+||||+|.||+|+ .+|..+++.|+..|+++...
T Consensus 972 ~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 972 ALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp CCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 446889999999999994 68899999999999988763
No 95
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.9e-31 Score=288.60 Aligned_cols=246 Identities=25% Similarity=0.343 Sum_probs=214.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|+.+.+..+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 235 (490)
T 3ju8_A 156 PNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHS 235 (490)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999853211100
Q ss_pred -----------h-------------------------------hhhcCCcccccceeEecccc-HHHHHHHHHHHHhcCc
Q psy1099 59 -----------W-------------------------------RKSCLSPLAYRSRTYVQEDI-YDTFVKKAVEKAAARK 95 (605)
Q Consensus 59 -----------~-------------------------------~~~~~~~~~~~~~~~v~~~i-~~~~~~~l~~~~~~~~ 95 (605)
+ .|.|.++ +|++||+++ ||+|+++++++.++++
T Consensus 236 ~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~~~~~~~~ 311 (490)
T 3ju8_A 236 QFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCA----RRLLVPQGAWGDALLARLVAVSATLR 311 (490)
T ss_dssp HTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSE----EEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred HhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC----CEEEEECCccHHHHHHHHHHHHHhcc
Confidence 0 0345544 899999996 9999999999999999
Q ss_pred cCC-CCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099 96 VGD-PFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174 (605)
Q Consensus 96 vg~-~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~ 174 (605)
+|+ |.++++++||+++..+++++.++|+.+.++|+++.+||..
T Consensus 312 ~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~------------------------------------ 355 (490)
T 3ju8_A 312 VGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ------------------------------------ 355 (490)
T ss_dssp BCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCC------------------------------------
T ss_pred CCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCc------------------------------------
Confidence 999 9999999999999999999999888888888887777643
Q ss_pred cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099 175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 254 (605)
Q Consensus 175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P 254 (605)
....|+|++|
T Consensus 356 ----------------------------------------------------------------------~~~~g~~~~P 365 (490)
T 3ju8_A 356 ----------------------------------------------------------------------PIDGAALLTP 365 (490)
T ss_dssp ----------------------------------------------------------------------CSTTSCCCCC
T ss_pred ----------------------------------------------------------------------cCCCCCEEcc
Confidence 1235789999
Q ss_pred eEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCC-cCCC
Q psy1099 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ 333 (605)
Q Consensus 255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~ 333 (605)
||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||.... ..+.
T Consensus 366 Tvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~ 444 (490)
T 3ju8_A 366 GILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASS 444 (490)
T ss_dssp EEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTT
T ss_pred EEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999997553 4578
Q ss_pred CCccccccCCCchHHhHHhhhcccceeEEEe
Q psy1099 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364 (605)
Q Consensus 334 ~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~ 364 (605)
+||||+|.||++ ++++|++.|+++.
T Consensus 445 ~PfGG~~~SG~~------~~~~~~~~k~v~~ 469 (490)
T 3ju8_A 445 APFGGIGASGNH------RPSAYYAADYCAY 469 (490)
T ss_dssp SEECCCGGGBSS------CCEETTHHHHHEE
T ss_pred CCcCCccccchh------HHHhhheeEEEEE
Confidence 999999999975 3567777776543
No 96
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=99.96 E-value=3.6e-30 Score=295.70 Aligned_cols=250 Identities=29% Similarity=0.465 Sum_probs=220.2
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCCCCCChhh-----------------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPY----------------------- 58 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~----------------------- 58 (605)
++|++++||++||+||+||||.||+++..++++++++|+|+|++|+|+|+++.+..+
T Consensus 666 ~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~ 745 (1001)
T 3haz_A 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINR 745 (1001)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999864321000
Q ss_pred --------h------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHHhcC
Q psy1099 59 --------W------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAAR 94 (605)
Q Consensus 59 --------~------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~ 94 (605)
+ .|.|.++ ++++||+++||+|++++++.++++
T Consensus 746 ~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~----~rllV~e~i~d~f~~~L~~~~~~l 821 (1001)
T 3haz_A 746 ALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL----RLLFVQEDVADRMIEMVAGAAREL 821 (1001)
T ss_dssp HHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE----EEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred HHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCC----ceeeccHHHHHHHHHHHHHHHHhc
Confidence 0 1356665 899999999999999999999999
Q ss_pred ccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEe
Q psy1099 95 KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174 (605)
Q Consensus 95 ~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~ 174 (605)
++|+|.++++++||+|+..+.+++..+|+.+.+.| ++ +||..+
T Consensus 822 ~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~----------------------------------- 864 (1001)
T 3haz_A 822 KIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA----------------------------------- 864 (1001)
T ss_dssp CBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-----------------------------------
T ss_pred CCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-----------------------------------
Confidence 99999999999999999999999999998888777 66 665421
Q ss_pred cCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeeeee
Q psy1099 175 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 254 (605)
Q Consensus 175 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P 254 (605)
..|+|++|
T Consensus 865 ------------------------------------------------------------------------~~G~fv~P 872 (1001)
T 3haz_A 865 ------------------------------------------------------------------------PEGCFVAP 872 (1001)
T ss_dssp ------------------------------------------------------------------------CSSSCCCC
T ss_pred ------------------------------------------------------------------------CCCcEEee
Confidence 14788999
Q ss_pred eEeeccCcchhhhhhhhcCceEEeEecCC--HHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC--Cc
Q psy1099 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV 330 (605)
Q Consensus 255 tvl~~v~~~~~i~~eE~FgPvl~i~~~~d--~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~--~~ 330 (605)
||+.+ +++.+++||+|||||+|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||... ..
T Consensus 873 Tvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~ 950 (1001)
T 3haz_A 873 HIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAV 950 (1001)
T ss_dssp EEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCC
T ss_pred EEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCC
Confidence 99974 6788999999999999999996 799999999999999999999999999999999999999999754 34
Q ss_pred CCCCCccccccCCCc-hHHhHHhhhcccceeEEEecC
Q psy1099 331 VPQAPFGGFKESGIG-RELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 331 ~~~~pfGG~~~SG~G-~~~G~~~~~~~~~~k~~t~s~ 366 (605)
.+.+||||+|.||+| +.+|..+++.|+..|+++...
T Consensus 951 ~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 951 VGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp TTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 567899999999999 568899999999999988763
No 97
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.4e-28 Score=268.52 Aligned_cols=242 Identities=23% Similarity=0.282 Sum_probs=200.7
Q ss_pred ccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChh---------------------
Q psy1099 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAP--------------------- 57 (605)
Q Consensus 3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~--------------------- 57 (605)
+|++++||++||+||+|||+.+|+|+.++++++. ++|+|+|++|+|+|++.+...
T Consensus 189 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~ 268 (528)
T 3v4c_A 189 GGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268 (528)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 4899999999999999999999999999998764 679999999999986532100
Q ss_pred --------hh-----------------------------------------hhhcCCcccccceeEeccc-cHHHHHHHH
Q psy1099 58 --------YW-----------------------------------------RKSCLSPLAYRSRTYVQED-IYDTFVKKA 87 (605)
Q Consensus 58 --------~~-----------------------------------------~~~~~~~~~~~~~~~v~~~-i~~~~~~~l 87 (605)
.+ .|.|.++ +|++||++ +||+|++++
T Consensus 269 ~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l 344 (528)
T 3v4c_A 269 ALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNP----GIAVVIEGADADRFTTAA 344 (528)
T ss_dssp HHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCC----CEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccC----cEEEEecccHHHHHHHHH
Confidence 00 0345555 89999997 999999999
Q ss_pred HHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhcccccc
Q psy1099 88 VEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFG 167 (605)
Q Consensus 88 ~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifg 167 (605)
+++++++++| +.+||+++....++
T Consensus 345 ~~~~~~~~~~------~~~gp~~~~~~~~~-------------------------------------------------- 368 (528)
T 3v4c_A 345 VEALAKVAPQ------TMLTDGIAKAYRDG-------------------------------------------------- 368 (528)
T ss_dssp HHHHHTCCCE------ECSCHHHHHHHHHH--------------------------------------------------
T ss_pred HHHHHhcccC------CCCCHHHHHHHHHH--------------------------------------------------
Confidence 9999888754 45566554333222
Q ss_pred ceeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCC
Q psy1099 168 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 247 (605)
Q Consensus 168 p~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 247 (605)
+..+++ ++|+++++||..
T Consensus 369 --------------------------------------------------------v~~~~~---~~Ga~v~~gG~~--- 386 (528)
T 3v4c_A 369 --------------------------------------------------------QARFAT---RNAVKPLLATES--- 386 (528)
T ss_dssp --------------------------------------------------------HHHHHT---CTTCEEEECCCC---
T ss_pred --------------------------------------------------------HHHHHH---hCCCEEEeCCCc---
Confidence 222222 357788888764
Q ss_pred CCeeeeeeEeeccCcc---hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecC--ChHHHHHHHHHhh--cc
Q psy1099 248 KGYFIEPTVFSNVTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT--NIDTANTFAHAIN--AG 320 (605)
Q Consensus 248 ~g~~~~Ptvl~~v~~~---~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~--d~~~~~~~~~~~~--~g 320 (605)
.|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|
T Consensus 387 ~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG 466 (528)
T 3v4c_A 387 SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAG 466 (528)
T ss_dssp CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEE
T ss_pred CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCc
Confidence 6899999999988888 899999999999999999999999999999999999999999 8999999999998 99
Q ss_pred cEEEeccCC---cCCCCCccc-cccCCCchHH--hHHhhhcccceeEEEecC
Q psy1099 321 SVWINCYQA---VVPQAPFGG-FKESGIGREL--GKAALDEYTELKTVTESP 366 (605)
Q Consensus 321 ~v~iN~~~~---~~~~~pfGG-~~~SG~G~~~--G~~~~~~~~~~k~~t~s~ 366 (605)
+|+||.... ..+.+|||| +|.||+|+++ |.++++.|++.|++..-|
T Consensus 467 ~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p 518 (528)
T 3v4c_A 467 RVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQNMP 518 (528)
T ss_dssp EEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEESCC
T ss_pred EEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhhcCC
Confidence 999997533 358899999 9999999875 999999999999876654
No 98
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=99.95 E-value=1.9e-27 Score=258.53 Aligned_cols=240 Identities=18% Similarity=0.258 Sum_probs=197.9
Q ss_pred ccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCCCChh---------------------
Q psy1099 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGPMSAP--------------------- 57 (605)
Q Consensus 3 ~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~~~--------------------- 57 (605)
+|++++||++||+||+||||.+|+++.++++++ .++|+|+|++|+|+|.+.+...
T Consensus 156 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (510)
T 1ez0_A 156 GGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGR 235 (510)
T ss_dssp SHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHH
Confidence 489999999999999999999999999999998 5579999999999986442110
Q ss_pred --------h-----------------------hh-----------------hhcCCcccccceeEeccc-cHHHHHHHHH
Q psy1099 58 --------Y-----------------------WR-----------------KSCLSPLAYRSRTYVQED-IYDTFVKKAV 88 (605)
Q Consensus 58 --------~-----------------------~~-----------------~~~~~~~~~~~~~~v~~~-i~~~~~~~l~ 88 (605)
. +. |.|.++ +|++||++ +||+|++++.
T Consensus 236 ~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~----~rvlV~~~~i~d~f~~~l~ 311 (510)
T 1ez0_A 236 ALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKP----GVVFALNTPETQAFIETAQ 311 (510)
T ss_dssp HHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCC----CEEEEESSHHHHHHHHHHH
T ss_pred HHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCC----CEEEEeCCccHHHHHHHHH
Confidence 0 00 234444 89999999 9999999999
Q ss_pred HHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099 89 EKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 168 (605)
Q Consensus 89 ~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp 168 (605)
+.++++++ ||++++.+.+++.++|+.+++
T Consensus 312 ~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~----------------------------------------- 340 (510)
T 1ez0_A 312 SLIRQQSP----------STLLTPGIRDSYQSQVVSRGS----------------------------------------- 340 (510)
T ss_dssp HHHHHCCC----------BCCSSHHHHHHHHHHHHHHHT-----------------------------------------
T ss_pred HHHHhcCC----------CCCCCHHHHHHHHHHHHHHHh-----------------------------------------
Confidence 99988875 477776665555444443331
Q ss_pred eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248 (605)
Q Consensus 169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 248 (605)
++|+++++||. .
T Consensus 341 ----------------------------------------------------------------~~Ga~~~~gg~----~ 352 (510)
T 1ez0_A 341 ----------------------------------------------------------------DDGIDVTFSQA----E 352 (510)
T ss_dssp ----------------------------------------------------------------STTEEEEECCC----C
T ss_pred ----------------------------------------------------------------cCCCEEEecCC----C
Confidence 24666777764 2
Q ss_pred CeeeeeeEeeccCcc---hhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCCh--HHHHHHHHHh--hccc
Q psy1099 249 GYFIEPTVFSNVTDD---FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI--DTANTFAHAI--NAGS 321 (605)
Q Consensus 249 g~~~~Ptvl~~v~~~---~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~--~~~~~~~~~~--~~g~ 321 (605)
|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+
T Consensus 353 g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~ 432 (510)
T 1ez0_A 353 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGR 432 (510)
T ss_dssp TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEE
T ss_pred CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccE
Confidence 788899999888877 99999999999999999999999999999999999999999997 7899999999 7999
Q ss_pred EEEeccCC---cCCCCCccc-cccCCCch--HHhHHhhhcccceeEEEec
Q psy1099 322 VWINCYQA---VVPQAPFGG-FKESGIGR--ELGKAALDEYTELKTVTES 365 (605)
Q Consensus 322 v~iN~~~~---~~~~~pfGG-~~~SG~G~--~~G~~~~~~~~~~k~~t~s 365 (605)
|+||.... ..+.+|||| ++.||+|+ .+|.++++.|++.|++...
T Consensus 433 V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~ 482 (510)
T 1ez0_A 433 LVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQAL 482 (510)
T ss_dssp EEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESC
T ss_pred EEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCC
Confidence 99997543 357899999 79999875 3799999999998877654
No 99
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=99.91 E-value=1.3e-25 Score=241.04 Aligned_cols=221 Identities=15% Similarity=0.152 Sum_probs=154.9
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----H----cCCCCccEEEecCCCCCChhhhh-------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----Q----AGFPDGVISVLPGYGPMSAPYWR------------- 60 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~----aGlP~gvv~vv~g~~~~~~~~~~------------- 60 (605)
++|++++||++||+||+||||.+|+++.+++++++ + +|+|+|++|+|+ ++++....+.
T Consensus 141 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS 219 (468)
T 1vlu_A 141 IANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGS 219 (468)
T ss_dssp HHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESC
T ss_pred HHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECC
Confidence 57899999999999999999999999999999995 8 999999999999 6643322110
Q ss_pred --------h----------------------------------------hcCCcccccceeEeccccHHHHHHHHHHHHh
Q psy1099 61 --------K----------------------------------------SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAA 92 (605)
Q Consensus 61 --------~----------------------------------------~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~ 92 (605)
+ .|.++ +|++||+++ |+|++++.+.++
T Consensus 220 ~~~g~~i~~~a~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G~C~a~----~rvlV~~~i-d~f~~~l~~~~~ 294 (468)
T 1vlu_A 220 NALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAM----ETLLINPKF-SKWWEVLENLTL 294 (468)
T ss_dssp HHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----CCCC----EEEEECTTS-TTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCCcCCcC----cEEEEECCH-HHHHHHHHHHHH
Confidence 0 13333 899999999 999999999888
Q ss_pred cCcc---CCCCCCCCCccccCCHHHHHHHHHH-HHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099 93 ARKV---GDPFDKSVQQGPQVDAVMFTKVLNY-IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 168 (605)
Q Consensus 93 ~~~v---g~~~~~~~~~gp~i~~~~~~~~~~~-i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp 168 (605)
++++ |+|.+ .++ |++
T Consensus 295 ~~~v~~~Gdp~~-----------------~~~~i~~-------------------------------------------- 313 (468)
T 1vlu_A 295 EGGVTIHATKDL-----------------KTAYFDK-------------------------------------------- 313 (468)
T ss_dssp HHCCCBEECHHH-----------------HHHHHHH--------------------------------------------
T ss_pred hcCCeecCCHHH-----------------hcccccc--------------------------------------------
Confidence 7776 54311 111 111
Q ss_pred eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248 (605)
Q Consensus 169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 248 (605)
+. ++++||.
T Consensus 314 --------------------------------------------------------------a~----~~~~gG~----- 322 (468)
T 1vlu_A 314 --------------------------------------------------------------LN----ELGKLTE----- 322 (468)
T ss_dssp --------------------------------------------------------------HH----HHTCCCH-----
T ss_pred --------------------------------------------------------------cc----eeeccCC-----
Confidence 11 2334443
Q ss_pred CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccC
Q psy1099 249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ 328 (605)
Q Consensus 249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~ 328 (605)
| +.||++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||...
T Consensus 323 g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 398 (468)
T 1vlu_A 323 A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAST 398 (468)
T ss_dssp H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCG
T ss_pred C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCC
Confidence 3 688887 788999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred CcCCCCCcc-----ccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 329 AVVPQAPFG-----GFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 329 ~~~~~~pfG-----G~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
...+..||| |+|.||+|++ |..++++|++.|+++..
T Consensus 399 ~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~ 439 (468)
T 1vlu_A 399 RFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG 439 (468)
T ss_dssp GGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred CCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence 667788999 9999999999 99999999999998765
No 100
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=99.91 E-value=1.1e-25 Score=241.96 Aligned_cols=238 Identities=14% Similarity=0.182 Sum_probs=195.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHH----HHHHcCCCCccEEEecCCCCCCh-hhh-----------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAA----LTQQAGFPDGVISVLPGYGPMSA-PYW----------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~----ll~~aGlP~gvv~vv~g~~~~~~-~~~----------------- 59 (605)
++|++++||++||+||+||||.+|+|+.++++ ++.++|+|+|++|+|+|++.+.. .++
T Consensus 125 ~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~ 204 (464)
T 3k9d_A 125 VIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMV 204 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHHH
Confidence 46899999999999999999999999998655 56888999999999998643211 000
Q ss_pred -------------------------------------------hhhcCCcccccceeEeccccHHHHHHHHHHHH-----
Q psy1099 60 -------------------------------------------RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKA----- 91 (605)
Q Consensus 60 -------------------------------------------~~~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~----- 91 (605)
.|.|.++ +|++||+++||+|++++.++.
T Consensus 205 ~~a~~~~kpvlelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~~ 280 (464)
T 3k9d_A 205 KAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASE----QSVVVERVNKEAVIAEFRKQGAHFLS 280 (464)
T ss_dssp HHHTTSSSCEEEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSC----CEEEEEHHHHHHHHHHHHHTTEEECC
T ss_pred HHHHhcCCcEEeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCC----cEEEEeHHHHHHHHHHHHHhhhhhcC
Confidence 1346665 899999999999999999875
Q ss_pred --hcCccCCCC-CCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccc
Q psy1099 92 --AARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 168 (605)
Q Consensus 92 --~~~~vg~~~-~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp 168 (605)
..+++|+|. ++++.+||+++..+++
T Consensus 281 ~~~~~~~g~~~~~~~~~~gp~i~~~~~~---------------------------------------------------- 308 (464)
T 3k9d_A 281 DAEAVQLGKFILRPNGSMNPAIVGKSVQ---------------------------------------------------- 308 (464)
T ss_dssp HHHHHHHHHHHBCTTSCBCGGGTTCCHH----------------------------------------------------
T ss_pred hhhhhhhcccccCCCCccCcccCHHHHH----------------------------------------------------
Confidence 456777776 6677788777555444
Q ss_pred eeEEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCC
Q psy1099 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248 (605)
Q Consensus 169 ~~~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 248 (605)
++.+++++++++|+++++||..
T Consensus 309 ------------------------------------------------------~i~~~~~~a~~~ga~vl~gg~~---- 330 (464)
T 3k9d_A 309 ------------------------------------------------------HIANLAGLTVPADARVLIAEET---- 330 (464)
T ss_dssp ------------------------------------------------------HHHHHTTCCCCTTCCEEEEECC----
T ss_pred ------------------------------------------------------HHHHHhhhhhcCCCEEEEcCCC----
Confidence 4445556666778888888742
Q ss_pred CeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHH----HhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEE
Q psy1099 249 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI----ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWI 324 (605)
Q Consensus 249 g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai----~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~i 324 (605)
++++++++. ||+|||||+|++|+|+|||| +++|+++|||++||||+|.+++++|++++++|+|+|
T Consensus 331 ----------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~v 399 (464)
T 3k9d_A 331 ----------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLV 399 (464)
T ss_dssp ----------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEE
T ss_pred ----------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEE
Confidence 466778765 89999999999999999997 799999999999999999999999999999999999
Q ss_pred eccCC---------cCCCCCccccccCCCchHHhHHhhhcccceeEEEec
Q psy1099 325 NCYQA---------VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 365 (605)
Q Consensus 325 N~~~~---------~~~~~pfGG~~~SG~G~~~G~~~~~~~~~~k~~t~s 365 (605)
|.+.. ..+.+|||| +.+|.|.++|+.+++.|++.|++...
T Consensus 400 N~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 400 NTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp SSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred ECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 97543 468899998 77899999999999999999988765
No 101
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=99.90 E-value=4.9e-25 Score=236.16 Aligned_cols=261 Identities=19% Similarity=0.132 Sum_probs=191.6
Q ss_pred cchhHHHhhcCcEEEccCCCCchhHHHHHHHHHHc----CCCCccEEEecCCCCCChhhhhhhcCCcccccceeEecccc
Q psy1099 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQEDI 79 (605)
Q Consensus 4 ~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~~a----GlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~i 79 (605)
+++++||++||+||+||||.+|+++.+|+++++++ | |+|++|+|+|+.+.+..++.++.++.+.|++
T Consensus 157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTG-------- 227 (463)
T 2h5g_A 157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRG-------- 227 (463)
T ss_dssp HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEES--------
T ss_pred HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEEC--------
Confidence 68999999999999999999999999999999999 9 9999999999433444455565566666666
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchh
Q psy1099 80 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 159 (605)
Q Consensus 80 ~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~ 159 (605)
+.-+.+.+.+.+.++ -..+++||++ |+||+++.+...
T Consensus 228 -S~~~G~~i~~~aal~---------------------------------pv~lElGGk~---------p~iV~~dADl~~ 264 (463)
T 2h5g_A 228 -SSQLVRDIQKAAKGI---------------------------------PVMGHSEGIC---------HMYVDSEASVDK 264 (463)
T ss_dssp -CHHHHHHHHHHCSSS---------------------------------CBCSCSCCCE---------EEEECTTCCTTT
T ss_pred -CHHHHHHHHHhcCCC---------------------------------CEEEecCCcc---------eEEEcCCCCHHH
Confidence 345555555544311 1157889997 888887554333
Q ss_pred hhcccccc---ceeEE-------EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhh
Q psy1099 160 IAREEIFG---PVQTI-------IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIK 229 (605)
Q Consensus 160 ~~~~~ifg---p~~~~-------v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~ 229 (605)
++...+++ .+|.| ++++..| + .++++ +++
T Consensus 265 Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d-----------~---------------------------p~~~~---~i~ 303 (463)
T 2h5g_A 265 VTRLVRDSKCEYPAACNALETLLIHRDLLR-----------T---------------------------PLFDQ---IID 303 (463)
T ss_dssp HHHHHHHHHHSCTTSTTSEEEEEEEGGGTT-----------S---------------------------HHHHH---HHH
T ss_pred HHHHHHHHhccCCCccccCcEEEEeccccc-----------h---------------------------HHHHH---HHH
Confidence 44444432 13433 3333332 0 01223 366
Q ss_pred hccccCCeeeeCCCccCCCCeeeeeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHH
Q psy1099 230 SGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDT 309 (605)
Q Consensus 230 ~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~ 309 (605)
+++++|++++.|+.. ...++|+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 304 ~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 374 (463)
T 2h5g_A 304 MLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENT 374 (463)
T ss_dssp HHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred HHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHH
Confidence 677789999855432 2234442 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccEEEeccCCcCCCCCccccccCCCc--hH--HhHHhhhcccceeEEEecC
Q psy1099 310 ANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG--RE--LGKAALDEYTELKTVTESP 366 (605)
Q Consensus 310 ~~~~~~~~~~g~v~iN~~~~~~~~~pfGG~~~SG~G--~~--~G~~~~~~~~~~k~~t~s~ 366 (605)
++++++++++|+|+||......+.+||||+|+||+| ++ +|.+++++|++.|+++...
T Consensus 375 a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 375 AEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999976666788999999999999 65 8999999999999987764
No 102
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=99.89 E-value=6.5e-24 Score=226.88 Aligned_cols=215 Identities=21% Similarity=0.209 Sum_probs=173.1
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHH----HHcCCCCccEEEecCCCC-CChhhh-----------------
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALT----QQAGFPDGVISVLPGYGP-MSAPYW----------------- 59 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll----~~aGlP~gvv~vv~g~~~-~~~~~~----------------- 59 (605)
++|++++||++||+||+||||.+|+++.++++++ .++|+|+|++|+|+|++. .+...+
T Consensus 152 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~v 231 (444)
T 4ghk_A 152 TIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSL 231 (444)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHH
Confidence 5689999999999999999999999999999997 789999999999998543 222111
Q ss_pred ----hh----------------------------------------hcCCcccccceeEeccccHHHHHHHHHHHHhcCc
Q psy1099 60 ----RK----------------------------------------SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARK 95 (605)
Q Consensus 60 ----~~----------------------------------------~~~~~~~~~~~~~v~~~i~~~~~~~l~~~~~~~~ 95 (605)
.+ .|.++ +|++||+++||+|++++++++++++
T Consensus 232 g~~v~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G~C~a~----~rvlV~~~i~d~f~~~l~~~~~~~~ 307 (444)
T 4ghk_A 232 IERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTM----ETLLVARGIAPAVLSPLGRLYREKG 307 (444)
T ss_dssp HHHHHHHCCSCBCCCCCCCCEEEECTTCCHHHHHHHCC---------CCCC----CEEEEEGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCcccCcC----ceEEEeHHHHHHHHHHHHHHHHHcC
Confidence 01 12232 7899999999999999998887776
Q ss_pred c---CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEE
Q psy1099 96 V---GDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 172 (605)
Q Consensus 96 v---g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~ 172 (605)
+ |+|.
T Consensus 308 ~~~~g~p~------------------------------------------------------------------------ 315 (444)
T 4ghk_A 308 VELRVDAD------------------------------------------------------------------------ 315 (444)
T ss_dssp CEEEECHH------------------------------------------------------------------------
T ss_pred CeecCCHH------------------------------------------------------------------------
Confidence 6 3220
Q ss_pred EecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHHHHhhhhccccCCeeeeCCCccCCCCeee
Q psy1099 173 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 252 (605)
Q Consensus 173 v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~ 252 (605)
...+++++. .|
T Consensus 316 ---------------------------------------------------~~~~i~~a~---------------~G--- 326 (444)
T 4ghk_A 316 ---------------------------------------------------ARAVLEAAG---------------VG--- 326 (444)
T ss_dssp ---------------------------------------------------HHHHHHHTT---------------CC---
T ss_pred ---------------------------------------------------HHHHHHhcc---------------cC---
Confidence 011122221 01
Q ss_pred eeeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCC
Q psy1099 253 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332 (605)
Q Consensus 253 ~Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~ 332 (605)
++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+
T Consensus 327 ---~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~ 401 (444)
T 4ghk_A 327 ---PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFAD 401 (444)
T ss_dssp ---CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCS
T ss_pred ---cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCC
Confidence 11 3567899999999999999999999999999999999999999999999999999999999999998766678
Q ss_pred CCCccccccCCCc----hHHhHHhhhcccceeEEEecC
Q psy1099 333 QAPFGGFKESGIG----RELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 333 ~~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s~ 366 (605)
..||||.+.||+| +++|.+++++|++.|+++...
T Consensus 402 ~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 402 GFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp TTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 8999999999998 678999999999999887653
No 103
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=99.89 E-value=3.7e-24 Score=227.59 Aligned_cols=110 Identities=28% Similarity=0.329 Sum_probs=100.8
Q ss_pred eeEeeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhhcccEEEeccCCcCCC
Q psy1099 254 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333 (605)
Q Consensus 254 Ptvl~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 333 (605)
||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||......+.
T Consensus 309 Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~ 385 (427)
T 1o20_A 309 PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDG 385 (427)
T ss_dssp TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCST
T ss_pred Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCC
Confidence 775 34578999999999999999999999999999999999999999999999999999999999999976656778
Q ss_pred CCccccccCCCc----hHHhHHhhhcccceeEEEecC
Q psy1099 334 APFGGFKESGIG----RELGKAALDEYTELKTVTESP 366 (605)
Q Consensus 334 ~pfGG~~~SG~G----~~~G~~~~~~~~~~k~~t~s~ 366 (605)
.||||.+.||+| +++|.+++++|++.|+++...
T Consensus 386 ~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 386 GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp TTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999998 467999999999999987764
No 104
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=99.85 E-value=1.1e-22 Score=217.98 Aligned_cols=276 Identities=17% Similarity=0.203 Sum_probs=189.8
Q ss_pred cccchhHHHhhcCcEEEccCCCCchhHHHHHHHHH----HcCCCCccEEEecCCCCCChhhhhhhcCCcccccceeEecc
Q psy1099 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQ----QAGFPDGVISVLPGYGPMSAPYWRKSCLSPLAYRSRTYVQE 77 (605)
Q Consensus 2 ~~~~~~~ALaaGN~vV~Kps~~~p~~~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (605)
++|++++||++||+||+||||.+|+|+..+++++. ++|+|+|++|+|+|++.+
T Consensus 120 ~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~----------------------- 176 (452)
T 3my7_A 120 AIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE----------------------- 176 (452)
T ss_dssp HHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHH-----------------------
T ss_pred HHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHH-----------------------
Confidence 46899999999999999999999999999888876 689999999999985422
Q ss_pred ccHHHHHHHHHHHHhcCccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcE--EEeCCcccCCCCccccceEeccCC
Q psy1099 78 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK--LEAGGKRKGDKGYFIEPTVFSNVT 155 (605)
Q Consensus 78 ~i~~~~~~~l~~~~~~~~vg~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~G~~--~~~gG~~~~~~~~~v~P~vv~~~~ 155 (605)
..+.|+.... .+.-.+.|- ....+.+.+.+.+ .++||++ |+||+.+.
T Consensus 177 -----~~~~L~~~p~-------v~~V~fTGs----------~~~~~~a~~~~kp~~~e~gG~~---------p~iV~~dA 225 (452)
T 3my7_A 177 -----LSNALMKHDD-------IALILATGG----------PGMVKAAYSSGKPAIGVGAGNV---------PVVIDETA 225 (452)
T ss_dssp -----HHHHHHHCTT-------CCEEEECSC----------HHHHHHHHTSSSCEEECC--CE---------EEEECTTS
T ss_pred -----HHHHHHhCCC-------ccEEEEECc----------HHHHHHHHhcCCCEEecCCCCC---------eEEEeCCC
Confidence 2233322211 111122231 1123445555544 4557776 88888765
Q ss_pred Cchhhhccccc----ccee-------EEEecCCHHHHHHHHhcccCcceeeeeccchhhHHHHHHHcccCccchHhHHHH
Q psy1099 156 DDFKIAREEIF----GPVQ-------TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKV 224 (605)
Q Consensus 156 ~~~~~~~~~if----gp~~-------~~v~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~g~v~~~~~~~~ 224 (605)
+..+++...++ ..+| .+++++.+|++++.+.+.. ...++..+.+|+
T Consensus 226 Dl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~-----------------------gpli~~~~~~~v 282 (452)
T 3my7_A 226 DIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHK-----------------------AHVLSKTDADKV 282 (452)
T ss_dssp CHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTTT-----------------------EEECCHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHhC-----------------------CCcCCHHHHHHH
Confidence 44444444443 3343 4567788999999887641 225678889999
Q ss_pred HHhhhhccccCCeeeeCCCcc---CCCCeeeeeeE-------eeccCcchhhhhhhhcCceEEeEecCCHHHHHHhhcCC
Q psy1099 225 LNYIKSGVEQGGKLEAGGKRK---GDKGYFIEPTV-------FSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 294 (605)
Q Consensus 225 ~~~i~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv-------l~~v~~~~~i~~eE~FgPvl~i~~~~d~~eai~~~n~~ 294 (605)
.++++++...|++++ |+... ...|+|++||+ +.++++++++++ |+|||||+|++|+|+||||+++|++
T Consensus 283 ~~~i~~~~~~~a~v~-G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~ 360 (452)
T 3my7_A 283 RKVLLIDGALNAKIV-GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTM 360 (452)
T ss_dssp HHHHEETTEECGGGT-TCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHhhcccCCeEe-cCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhc
Confidence 999998777788874 66532 13589999997 778999999886 8999999999999999999999998
Q ss_pred C----cceeEEEecCChHHHHH---HHHHhhcccEEEeccCCcCCCCCccccccC-----------CCchHHhHHhhhcc
Q psy1099 295 K----YGLASGIVTTNIDTANT---FAHAINAGSVWINCYQAVVPQAPFGGFKES-----------GIGRELGKAALDEY 356 (605)
Q Consensus 295 ~----~glaa~vft~d~~~~~~---~~~~~~~g~v~iN~~~~~~~~~pfGG~~~S-----------G~G~~~G~~~~~~~ 356 (605)
. |||+++|||+|.+++++ |++++++|+|+||.+. +|||.+.. |+|.++|....++.
T Consensus 361 ~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv 434 (452)
T 3my7_A 361 VEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENV 434 (452)
T ss_dssp HHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCC
T ss_pred ccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCC
Confidence 5 99999999999888877 9999999999999753 57665532 67778777665544
Q ss_pred cceeEE
Q psy1099 357 TELKTV 362 (605)
Q Consensus 357 ~~~k~~ 362 (605)
...+.+
T Consensus 435 ~~~~l~ 440 (452)
T 3my7_A 435 GPKHLI 440 (452)
T ss_dssp CGGGGE
T ss_pred ChhHee
Confidence 443333
No 105
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=71.85 E-value=9.4 Score=30.65 Aligned_cols=61 Identities=21% Similarity=0.353 Sum_probs=40.1
Q ss_pred cCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcC
Q psy1099 457 VDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535 (605)
Q Consensus 457 i~~~~~~~~~~~i~~a~~-~g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~ 535 (605)
.++..+++..+.....++ .|++++..|.. |.++.+.. .|-+.|+.|+|.++|.++.|+-
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 355666666666665554 48888775542 33443311 1377899999999999999875
Q ss_pred CC
Q psy1099 536 KY 537 (605)
Q Consensus 536 ~~ 537 (605)
+|
T Consensus 75 ~Y 76 (99)
T 2fiu_A 75 EY 76 (99)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 106
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=58.93 E-value=43 Score=27.98 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHcCCeEEeCCc-ccCCCCeeEe-----eEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhh
Q psy1099 460 EMFTKVLNYIKSGVEQGGKLEAGGK-RKGDKGYFIE-----PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533 (605)
Q Consensus 460 ~~~~~~~~~i~~a~~~g~~v~~gg~-~~~~~g~~~~-----Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n 533 (605)
...+...++.++..+.|. ++.|+. .....+..+. |+|.+++=.+ ..|..| =+.|+.++|.+||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lg-G~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLG-GFYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEE-EEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Ccccce-eEEEEEeCCHHHHHHHHH
Confidence 445566667666666664 443322 1112233332 3444433222 345555 356789999999999999
Q ss_pred cCCCC
Q psy1099 534 DTKYG 538 (605)
Q Consensus 534 ~~~~g 538 (605)
+.++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 88764
No 107
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=51.26 E-value=18 Score=28.66 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=40.3
Q ss_pred cCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhcC
Q psy1099 457 VDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535 (605)
Q Consensus 457 i~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~~ 535 (605)
.++..+++..+.....++. |++++..| . +.++.+.. -..-+.|+.|+|.+.|.++.|+-
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCH
Confidence 3556666666666665554 88888755 3 23333321 02577999999999999999876
Q ss_pred CC
Q psy1099 536 KY 537 (605)
Q Consensus 536 ~~ 537 (605)
.|
T Consensus 74 eY 75 (94)
T 3lo3_A 74 EY 75 (94)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 108
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=39.74 E-value=51 Score=28.30 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=42.6
Q ss_pred ccCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCeeEeeEEeecCCCCCcccccceeeeeeeeEeeCCHHHHHHHhhc
Q psy1099 456 QVDAEMFTKVLNYIKSGVEQ-GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 534 (605)
Q Consensus 456 li~~~~~~~~~~~i~~a~~~-g~~v~~gg~~~~~~g~~~~Pti~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~~n~ 534 (605)
+.++..+++..+....+++. |+++++.|.. +.++.+... |. ..-+.|+.|+|.+.|+++.|+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 45667777777776665544 8888876643 223433221 11 146789999999999999887
Q ss_pred CCC
Q psy1099 535 TKY 537 (605)
Q Consensus 535 ~~~ 537 (605)
-.|
T Consensus 108 peY 110 (143)
T 3hhl_A 108 PVY 110 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 109
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.17 E-value=26 Score=31.39 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=41.1
Q ss_pred hhhcCceEEeEecCCHHHHHHhh----cCCCcceeEEEecCChHHHHHHHHHh
Q psy1099 269 EEIFGPVQTIIKFKTLDEVIERA----NDTKYGLASGIVTTNIDTANTFAHAI 317 (605)
Q Consensus 269 eE~FgPvl~i~~~~d~~eai~~~----n~~~~glaa~vft~d~~~~~~~~~~~ 317 (605)
||.||+..+..--.++++|++.| .....-|..|+++..-.....|.+.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 57889888888778999999999 77788899999998877777777655
No 110
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=33.24 E-value=18 Score=37.04 Aligned_cols=81 Identities=22% Similarity=0.256 Sum_probs=51.2
Q ss_pred CceEEeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhh-cccEEEeccCC---------cCCCCCccccccC
Q psy1099 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN-AGSVWINCYQA---------VVPQAPFGGFKES 342 (605)
Q Consensus 273 gPvl~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~-~g~v~iN~~~~---------~~~~~pfGG~~~S 342 (605)
..- .|+-++|+|||++++|..-- =-.-|.++|+. .+..+++ +|.|++..++. .+.-+|-+|.
T Consensus 303 ~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~--- 374 (434)
T 1kae_A 303 NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGY--- 374 (434)
T ss_dssp TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTG---
T ss_pred HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCc---
Confidence 444 78899999999999998532 23567888875 3445555 99999984322 2344565554
Q ss_pred CCchHHhHHhhhcccceeEEE
Q psy1099 343 GIGRELGKAALDEYTELKTVT 363 (605)
Q Consensus 343 G~G~~~G~~~~~~~~~~k~~t 363 (605)
.++.+.-+++.|....++.
T Consensus 375 --AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 375 --TATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp --GGTCCCSCGGGGEEEEEEE
T ss_pred --eeccCCCcHHhccceeeEE
Confidence 3443333455666655543
No 111
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=31.73 E-value=63 Score=23.92 Aligned_cols=36 Identities=14% Similarity=0.300 Sum_probs=30.8
Q ss_pred hcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC
Q psy1099 12 AGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY 51 (605)
Q Consensus 12 aGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~ 51 (605)
++|-+|+|-.|-+ +..++.++.+..+|+ ++-.+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6899999998554 788999999998887 99999886
No 112
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=30.65 E-value=68 Score=24.29 Aligned_cols=36 Identities=25% Similarity=0.493 Sum_probs=30.7
Q ss_pred hcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC
Q psy1099 12 AGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY 51 (605)
Q Consensus 12 aGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~ 51 (605)
++|-+|+|-.|-+ +..++.++.+..+|+ ++-.+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7899999988554 788999999998877 89999886
No 113
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=28.27 E-value=43 Score=34.22 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=46.0
Q ss_pred EeEecCCHHHHHHhhcCCCcceeEEEecCChHHHHHHHHHhh-cccEEEeccCCc---------CCCCCccccccCCCch
Q psy1099 277 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN-AGSVWINCYQAV---------VPQAPFGGFKESGIGR 346 (605)
Q Consensus 277 ~i~~~~d~~eai~~~n~~~~glaa~vft~d~~~~~~~~~~~~-~g~v~iN~~~~~---------~~~~pfGG~~~SG~G~ 346 (605)
.|+.++|.+||++++|..-- =-.-|.++|+. .+..+++ +|.|++..++.. +.-+|-+| ..+
T Consensus 313 ~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G-----~Ar 383 (423)
T 4gic_A 313 GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSG-----TAR 383 (423)
T ss_dssp EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCCTT-----GGG
T ss_pred eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCC-----ccc
Confidence 46778999999999998532 23467787775 4556665 999999743221 22345444 444
Q ss_pred HHhHHhhhcccceeEEE
Q psy1099 347 ELGKAALDEYTELKTVT 363 (605)
Q Consensus 347 ~~G~~~~~~~~~~k~~t 363 (605)
+.+.-++..|....++.
T Consensus 384 ~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 384 FSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp TCCCCCGGGGEEEEEEE
T ss_pred ccCCCCHHHeeeeeeEE
Confidence 44344455666555543
No 114
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=27.55 E-value=66 Score=24.36 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.9
Q ss_pred hcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC
Q psy1099 12 AGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY 51 (605)
Q Consensus 12 aGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~ 51 (605)
++|-+|+|-.|-+ +..++.++.+...+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 7899999987554 788999999887899999999986
No 115
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=27.18 E-value=66 Score=24.63 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=30.8
Q ss_pred hcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC
Q psy1099 12 AGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY 51 (605)
Q Consensus 12 aGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~ 51 (605)
++|-+|+|-.|-+ +..++.++.+.++|+ ++-.+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7899999998554 788999999987777 89999886
No 116
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=25.08 E-value=60 Score=29.03 Aligned_cols=38 Identities=18% Similarity=0.353 Sum_probs=33.1
Q ss_pred hhcCcEEEccCCCCchhHHHHHHHHHHcCCCCccEEEecCC
Q psy1099 11 AAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGY 51 (605)
Q Consensus 11 aaGN~vV~Kps~~~p~~~~~l~~ll~~aGlP~gvv~vv~g~ 51 (605)
.+||-+|+|-.|-+ |..++.++.+.++|++++-.+.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999987665 788999999988999999999986
No 117
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=22.87 E-value=31 Score=35.37 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=49.5
Q ss_pred eeEeeCCHHHHHHHhhcC-CCCceEEEEcCCHHHHHHHHHHcccCc-ccCC---CCccccc----C----CCCCCChhHH
Q psy1099 518 TIIKFKTLDEVIERANDT-KYGLASGIVTTNIDTANTFAHAINAGS-AVVP---QAPFGGF----K----ESGIGRELGK 584 (605)
Q Consensus 518 ~i~~~~~~~eai~~~n~~-~~gL~a~vft~d~~~~~~~~~~~~~G~-~~~~---~~PfGG~----~----~SG~G~~~g~ 584 (605)
.|+.++|++||++++|.- +-- .-|.++|. +.++.+++..+ +..+ .-|+|.+ . .+|+.++.+.
T Consensus 306 ~ii~v~~l~ea~~~~N~~APEH--Lel~~~dp---~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sg 380 (434)
T 1kae_A 306 RLIVTKDLAQCVEISNQYGPEH--LIIQTRNA---RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSS 380 (434)
T ss_dssp EEEECSSHHHHHHHHHHHCCSE--EEEESTTH---HHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCC
T ss_pred eEEEECCHHHHHHHHHHhhhHh--hhhhhcCH---HHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceeccCC
Confidence 567789999999999984 333 45889887 46677888544 3221 2233322 1 3466677777
Q ss_pred HHHHHhhhceEEE
Q psy1099 585 AALDEYTELKTVT 597 (605)
Q Consensus 585 ~~~~~~~~~k~v~ 597 (605)
-+.++|+++-++.
T Consensus 381 LsV~~F~K~~s~~ 393 (434)
T 1kae_A 381 LGLADFQKRMTVQ 393 (434)
T ss_dssp SCGGGGEEEEEEE
T ss_pred CcHHhccceeeEE
Confidence 7788888877665
No 118
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=21.63 E-value=2.9e+02 Score=21.66 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHHH-cCcEEEeCCcccCCCCccccceEeccCCCchhhhccccccceeEEEecCCHHHHHHHHhccc
Q psy1099 111 DAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189 (605)
Q Consensus 111 ~~~~~~~~~~~i~~a~~-~G~~~~~gG~~~~~~~~~v~P~vv~~~~~~~~~~~~~ifgp~~~~v~~~~~~~~i~~~~~~~ 189 (605)
++..+.+....+..+++ .|++++..|.. |.+++.. ..+...++.+.+++.+.+..++..
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~-----------~~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGT-----------ARARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESC-----------CCSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecC-----------CcCeEEEEECCCHHHHHHHHcCHH
Confidence 45555555555666666 68888876654 4444432 123567889999999998887644
Q ss_pred C
Q psy1099 190 Y 190 (605)
Q Consensus 190 ~ 190 (605)
|
T Consensus 76 Y 76 (99)
T 2fiu_A 76 Y 76 (99)
T ss_dssp H
T ss_pred H
Confidence 4
Done!