RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy1099
(605 letters)
>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase
1, ALDH families 1A, 1B, and 2-like. NAD+-dependent
retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36)
also known as aldehyde dehydrogenase family 1 member A1
(ALDH1A1) in humans, is a homotetrameric, cytosolic
enzyme that catalyzes the oxidation of retinaldehyde to
retinoic acid. Human ALDH1B1 and ALDH2 are also in this
cluster; both are mitochrondrial homotetramers which
play important roles in acetaldehyde oxidation; ALDH1B1
in response to UV light exposure and ALDH2 during
ethanol metabolism.
Length = 481
Score = 367 bits (945), Expect = e-121
Identities = 146/242 (60%), Positives = 178/242 (73%), Gaps = 17/242 (7%)
Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV------CAGSRTYV 422
I AA SNLKRV+LELGGKSP ++ ADAD+D A+ F CAGSRT+V
Sbjct: 238 KLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFV 297
Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
QE IYD FVK++VE+A R VG+PFD +QGPQ+D E F K+L I+SG ++G KLE G
Sbjct: 298 QESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECG 357
Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
GKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPVQ I KFKT+DEVIERAN+T YGLA+
Sbjct: 358 GKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAA 417
Query: 543 IVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
+ T +ID A TF++A+ AG+ V PQAPFGG+K SG GRELG+ L EYTE+KT
Sbjct: 418 VFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKT 477
Query: 596 VT 597
VT
Sbjct: 478 VT 479
Score = 262 bits (672), Expect = 6e-81
Identities = 99/148 (66%), Positives = 121/148 (81%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+D E F K+L I+SG ++G KLE GGKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPV
Sbjct: 332 IDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPV 391
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
Q I KFKT+DEVIERAN+T YGLA+ + T +ID A TF++A+ AG+VW+NCY V PQAP
Sbjct: 392 QQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAP 451
Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
FGG+K SG GRELG+ L EYTE+KTVT
Sbjct: 452 FGGYKMSGNGRELGEYGLQEYTEVKTVT 479
Score = 255 bits (654), Expect = 2e-78
Identities = 94/146 (64%), Positives = 118/146 (80%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SRT+VQE IYD FVK++VE+A R VG+PFD +QGPQ+D F K+L I+SG ++G
Sbjct: 293 SRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGA 352
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
KLE GGKR GDKGYFI+PTVFS+VTDD +IA+EEIFGPVQ I KFKT+DEVIERAN+T Y
Sbjct: 353 KLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTY 412
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLA+ + T +ID A TF++A+ AG+V
Sbjct: 413 GLAAAVFTKDIDKAITFSNALRAGTV 438
Score = 105 bits (265), Expect = 3e-24
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK PALA G V+LKPAEQTPLTALY+A+L ++AGFP GV++V+PGYGP
Sbjct: 161 MAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGP 213
>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2,
including 10-formyltetrahydrofolate dehydrogenase,
NAD+-dependent retinal dehydrogenase 1 and related
proteins. ALDH subfamily which includes the
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1,
EC=1.2.1.36), also known as aldehyde dehydrogenase
family 1 member A1 (ALDH1A1), in humans, a
homotetrameric, cytosolic enzyme that catalyzes the
oxidation of retinaldehyde to retinoic acid. Human
ALDH1B1 and ALDH2 are also in this cluster; both are
mitochrondrial homotetramers which play important roles
in acetaldehyde oxidation; ALDH1B1 in response to UV
light exposure and ALDH2 during ethanol metabolism.
10-formyltetrahydrofolate dehydrogenase (FTHFDH,
EC=1.5.1.6), also known as aldehyde dehydrogenase family
1 member L1 (ALDH1L1), in humans, a multi-domain
homotetramer with an N-terminal formyl transferase
domain and a C-terminal ALDH domain. FTHFDH catalyzes an
NADP+-dependent dehydrogenase reaction resulting in the
conversion of 10-formyltetrahydrofolate to
tetrahydrofolate and CO2. Also included in this
subfamily is the Arabidosis aldehyde dehydrogenase
family 2 members B4 and B7 (EC=1.2.1.3), which are
mitochondrial, homotetramers that oxidize acetaldehyde
and glycolaldehyde, as well as, the Arabidosis
cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme
involved in the oxidation of sinapalehyde and
coniferaldehyde. Also included is the AldA aldehyde
dehydrogenase of Aspergillus nidulans (locus AN0554),
the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5)
of Saccharomyces cerevisiae, and other similar
sequences.
Length = 476
Score = 354 bits (910), Expect = e-116
Identities = 134/244 (54%), Positives = 168/244 (68%), Gaps = 17/244 (6%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF------VCAGSRT 420
+IM AAA SNLK+V+LELGGKSP ++ DAD+D A + F CAGSR
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
+VQE IYD FV+K +A R VGDPFD QGPQV F K+L+YI+SG ++G L
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351
Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV TI+KFKT DEVIERANDT+YGLA
Sbjct: 352 TGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLA 411
Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
+G+ T +I+ A + A+ AG+ V PFGGFK+SG GRELG+ L+EYT++
Sbjct: 412 AGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQV 471
Query: 594 KTVT 597
K VT
Sbjct: 472 KAVT 475
Score = 252 bits (646), Expect = 4e-77
Identities = 87/148 (58%), Positives = 112/148 (75%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
V F K+L+YI+SG ++G L GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV
Sbjct: 328 VSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPV 387
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
TI+KFKT DEVIERANDT+YGLA+G+ T +I+ A + A+ AG+VW+N Y P
Sbjct: 388 VTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVP 447
Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
FGGFK+SG GRELG+ L+EYT++K VT
Sbjct: 448 FGGFKQSGFGRELGEEGLEEYTQVKAVT 475
Score = 240 bits (614), Expect = 2e-72
Identities = 87/146 (59%), Positives = 109/146 (74%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR +VQE IYD FV+K +A R VGDPFD QGPQV F K+L+YI+SG ++G
Sbjct: 289 SRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGA 348
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
L GG+R G KGYFI+PTVF++V DD KIA+EEIFGPV TI+KFKT DEVIERANDT+Y
Sbjct: 349 TLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEY 408
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLA+G+ T +I+ A + A+ AG+V
Sbjct: 409 GLAAGVFTKDINKALRVSRALKAGTV 434
Score = 102 bits (257), Expect = 3e-23
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
MLAWK PALAAG V+LKPAEQTPL+ALY+A L ++AGFP GV++++PG+GP
Sbjct: 157 MLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGP 209
>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4,
B7, C4-like. Included in this CD is the Arabidosis
aldehyde dehydrogenase family 2 members B4 and B7
(EC=1.2.1.3), which are mitochondrial homotetramers
that oxidize acetaldehyde and glycolaldehyde, but not
L-lactaldehyde. Also in this group, is the Arabidosis
cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme
involved in the oxidation of sinapalehyde and
coniferaldehyde.
Length = 476
Score = 319 bits (819), Expect = e-103
Identities = 137/239 (57%), Positives = 172/239 (71%), Gaps = 17/239 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRTYVQE 424
IM AA SNLK V+LELGGKSP ++C DADVD +A++ F CAGSRT+V E
Sbjct: 236 IMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHE 295
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD FV+KA +A R VGDPF K V+QGPQVD E F K+L+YI+ G E+G L GG
Sbjct: 296 SIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGD 355
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
R G KGY+I+PT+FS+V DD KIAR+EIFGPVQ+I+KFKT+DEVI+RAN++KYGLA+G+
Sbjct: 356 RIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVF 415
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
+ NIDTANT + A+ AG+ V PFGG+K SGIGRE G AL+ Y ++K V
Sbjct: 416 SKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474
Score = 227 bits (581), Expect = 9e-68
Identities = 97/177 (54%), Positives = 128/177 (72%), Gaps = 5/177 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SRT+V E IYD FV+KA +A R VGDPF K V+QGPQVD F K+L+YI+ G E+G
Sbjct: 289 SRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGA 348
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
L GG R G KGY+I+PT+FS+V DD KIAR+EIFGPVQ+I+KFKT+DEVI+RAN++KY
Sbjct: 349 TLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKY 408
Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKG 246
GLA+G+ + NIDTANT + A+ AG+V + + + + GG K+ G+ KG
Sbjct: 409 GLAAGVFSKNIDTANTLSRALKAGTVWVNCY----DVFDASIPFGGYKMSGIGREKG 461
Score = 222 bits (567), Expect = 9e-66
Identities = 88/147 (59%), Positives = 114/147 (77%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
VD E F K+L+YI+ G E+G L GG R G KGY+I+PT+FS+V DD KIAR+EIFGPV
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPV 387
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
Q+I+KFKT+DEVI+RAN++KYGLA+G+ + NIDTANT + A+ AG+VW+NCY P
Sbjct: 388 QSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIP 447
Query: 336 FGGFKESGIGRELGKAALDEYTELKTV 362
FGG+K SGIGRE G AL+ Y ++K V
Sbjct: 448 FGGYKMSGIGREKGIYALNNYLQVKAV 474
Score = 86.4 bits (214), Expect = 6e-18
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK GPALA G ++LKPAEQTPL+AL A L +AG PDGV++++ G+GP
Sbjct: 157 MFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGP 209
>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member.
Length = 538
Score = 308 bits (790), Expect = 1e-97
Identities = 138/249 (55%), Positives = 175/249 (70%), Gaps = 18/249 (7%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF------VCAGSRT 420
T ++ AA SNLK V+LELGGKSP ++C DADVD +A++ F CAGSRT
Sbjct: 286 TGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRT 345
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
+V E +YD FV+KA +A R VGDPF K V+QGPQ+D+E F K+L YIKSGVE G LE
Sbjct: 346 FVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLE 405
Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
GG R G KGY+I+PTVFSNV DD IA++EIFGPVQ+I+KFK LDEVI RAN+T+YGLA
Sbjct: 406 CGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLA 465
Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
+G+ T N+DTANT + A+ G+ V PFGG+K SGIGRE G +L+ Y ++
Sbjct: 466 AGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQV 525
Query: 594 KTVTESPLR 602
K V +PL+
Sbjct: 526 KAVV-TPLK 533
Score = 226 bits (577), Expect = 1e-66
Identities = 100/176 (56%), Positives = 124/176 (70%), Gaps = 3/176 (1%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SRT+V E +YD FV+KA +A R VGDPF K V+QGPQ+D+ F K+L YIKSGVE G
Sbjct: 343 SRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGA 402
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
LE GG R G KGY+I+PTVFSNV DD IA++EIFGPVQ+I+KFK LDEVI RAN+T+Y
Sbjct: 403 TLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRY 462
Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 246
GLA+G+ T N+DTANT + A+ G+V F I G G K+ G+ KG
Sbjct: 463 GLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFG---GYKMSGIGREKG 515
Score = 220 bits (561), Expect = 3e-64
Identities = 90/153 (58%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+D+E F K+L YIKSGVE G LE GG R G KGY+I+PTVFSNV DD IA++EIFGPV
Sbjct: 382 IDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPV 441
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
Q+I+KFK LDEVI RAN+T+YGLA+G+ T N+DTANT + A+ G+VW+NC+ P
Sbjct: 442 QSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIP 501
Query: 336 FGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
FGG+K SGIGRE G +L+ Y ++K V +PL+
Sbjct: 502 FGGYKMSGIGREKGIYSLNNYLQVKAVV-TPLK 533
Score = 82.5 bits (204), Expect = 1e-16
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK GPALA G ++LK AEQTPL+ALY A L +AG P GV++V+ G+GP
Sbjct: 211 MFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGP 263
>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of
dehydrogenases act on aldehyde substrates. Members use
NADP as a cofactor. The family includes the following
members: The prototypical members are the aldehyde
dehydrogenases EC:1.2.1.3. Succinate-semialdehyde
dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase
EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28.
Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27.
Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9.
Delta-1-pyrroline-5-carboxylate dehydrogenase EC:
1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10.
Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This
family also includes omega crystallin, an eye lens
protein from squid and octopus that has little aldehyde
dehydrogenase activity.
Length = 459
Score = 301 bits (773), Expect = 4e-96
Identities = 117/240 (48%), Positives = 150/240 (62%), Gaps = 22/240 (9%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYY----CFVCAGSRTYVQE 424
A AAA NLKRV+LELGGK+PL++ DAD+D A+ C AGSR V E
Sbjct: 222 AKAAAKNLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVC--TAGSRLLVHE 279
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD FV++ VE A + KVGDP D GP + + +VL+YI+ E+G KL GG+
Sbjct: 280 SIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE 339
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
+KGYF+EPTV ++VT D +IA+EEIFGPV ++I FK DE IE ANDT+YGLA+G+
Sbjct: 340 AGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVF 399
Query: 545 TTNIDTANTFAHAINAGS--------AVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
T +++ A A + AG PFGGFK+SG GRE GK L+EYTE KTV
Sbjct: 400 TNDLERALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
Score = 219 bits (561), Expect = 5e-65
Identities = 79/148 (53%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+ + +VL+YI+ E+G KL GG+ +KGYF+EPTV ++VT D +IA+EEIFGPV
Sbjct: 312 ISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPV 371
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA- 334
++I FK DE IE ANDT+YGLA+G+ T +++ A A + AG VWIN Y P+A
Sbjct: 372 LSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDPEAL 431
Query: 335 PFGGFKESGIGRELGKAALDEYTELKTV 362
PFGGFK+SG GRE GK L+EYTE KTV
Sbjct: 432 PFGGFKQSGFGREGGKEGLEEYTETKTV 459
Score = 208 bits (532), Expect = 9e-61
Identities = 72/146 (49%), Positives = 96/146 (65%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E IYD FV++ VE A + KVGDP D GP + +VL+YI+ E+G
Sbjct: 273 SRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGA 332
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
KL GG+ +KGYF+EPTV ++VT D +IA+EEIFGPV ++I FK DE IE ANDT+Y
Sbjct: 333 KLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEY 392
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLA+G+ T +++ A A + AG V
Sbjct: 393 GLAAGVFTNDLERALRVARRLEAGMV 418
Score = 88.0 bits (219), Expect = 2e-18
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+ AWK PALAAG V+LKP+E TPLTAL +A L ++AG P GV++V+ G G
Sbjct: 142 LAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGS 194
>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase.
Length = 501
Score = 292 bits (748), Expect = 6e-92
Identities = 138/245 (56%), Positives = 175/245 (71%), Gaps = 18/245 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQE 424
IM AAA SNLK+VSLELGGKSPL+I DADVDMA Y +C A SR YVQE
Sbjct: 253 IMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQE 312
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD FVKK VEKA VGDPFD +QGPQVD + F K+L+YI+ G +G L GGK
Sbjct: 313 GIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK 372
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
GDKGY+IEPT+F++VT+D KIA++EIFGPV +++KFKT++E I++AN+TKYGLA+GIV
Sbjct: 373 PCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIV 432
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
T ++D ANT + +I AG+ V P PFGG+K SG GR+ G ALD+Y ++K+V
Sbjct: 433 TKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
Query: 598 ESPLR 602
+PL
Sbjct: 493 -TPLY 496
Score = 208 bits (532), Expect = 2e-60
Identities = 87/146 (59%), Positives = 114/146 (78%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR YVQE IYD FVKK VEKA VGDPFD +QGPQVD F K+L+YI+ G +G
Sbjct: 306 SRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGA 365
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
L GGK GDKGY+IEPT+F++VT+D KIA++EIFGPV +++KFKT++E I++AN+TKY
Sbjct: 366 TLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKY 425
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLA+GIVT ++D ANT + +I AG++
Sbjct: 426 GLAAGIVTKDLDVANTVSRSIRAGTI 451
Score = 201 bits (513), Expect = 1e-57
Identities = 84/153 (54%), Positives = 119/153 (77%), Gaps = 1/153 (0%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
VD + F K+L+YI+ G +G L GGK GDKGY+IEPT+F++VT+D KIA++EIFGPV
Sbjct: 345 VDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPV 404
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
+++KFKT++E I++AN+TKYGLA+GIVT ++D ANT + +I AG++W+NCY A P P
Sbjct: 405 MSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCP 464
Query: 336 FGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
FGG+K SG GR+ G ALD+Y ++K+V +PL
Sbjct: 465 FGGYKMSGFGRDQGMDALDKYLQVKSVV-TPLY 496
Score = 83.3 bits (206), Expect = 8e-17
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M K PALAAGC +++KPAEQTPL+AL+ A L + AG PDGVI+V+ G+GP
Sbjct: 174 MFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGP 226
>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family.
The aldehyde dehydrogenase family (ALDH) of NAD(P)+
dependent enzymes, in general, oxidize a wide range of
endogenous and exogenous aliphatic and aromatic
aldehydes to their corresponding carboxylic acids and
play an important role in detoxification. Besides
aldehyde detoxification, many ALDH isozymes possess
multiple additional catalytic and non-catalytic
functions such as participating in metabolic pathways,
or as binding proteins, or as osmoregulants, to mention
a few. The enzyme has three domains, a NAD(P)+
cofactor-binding domain, a catalytic domain, and a
bridging domain; and the active enzyme is generally
either homodimeric or homotetrameric. The catalytic
mechanism is proposed to involve cofactor binding,
resulting in a conformational change and activation of
an invariant catalytic cysteine nucleophile. The
cysteine and aldehyde substrate form an oxyanion
thiohemiacetal intermediate resulting in hydride
transfer to the cofactor and formation of a
thioacylenzyme intermediate. Hydrolysis of the
thioacylenzyme and release of the carboxylic acid
product occurs, and in most cases, the reduced cofactor
dissociates from the enzyme. The evolutionary
phylogenetic tree of ALDHs appears to have an initial
bifurcation between what has been characterized as the
classical aldehyde dehydrogenases, the ALDH family
(ALDH) and extended family members or aldehyde
dehydrogenase-like (ALDH-like) proteins. The ALDH
proteins are represented by enzymes which share a number
of highly conserved residues necessary for catalysis and
cofactor binding and they include such proteins as
retinal dehydrogenase, 10-formyltetrahydrofolate
dehydrogenase, non-phosphorylating glyceraldehyde
3-phosphate dehydrogenase,
delta(1)-pyrroline-5-carboxylate dehydrogenases,
alpha-ketoglutaric semialdehyde dehydrogenase,
alpha-aminoadipic semialdehyde dehydrogenase, coniferyl
aldehyde dehydrogenase and succinate-semialdehyde
dehydrogenase. Included in this larger group are all
human, Arabidopsis, Tortula, fungal, protozoan, and
Drosophila ALDHs identified in families ALDH1 through
ALDH22 with the exception of families ALDH18, ALDH19,
and ALDH20 which are present in the ALDH-like group.
Length = 432
Score = 288 bits (740), Expect = 1e-91
Identities = 116/243 (47%), Positives = 148/243 (60%), Gaps = 19/243 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYYC--FVCAGSRTYVQE 424
+ AAA NLKRV+LELGGKSPL++ DAD+D A+ A SR V E
Sbjct: 190 AIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHE 249
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD FV++ VE+ A KVG+P D GP + A +VL YI+ +G KL GGK
Sbjct: 250 SIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGK 309
Query: 485 R-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
R +G KGYF+ PTV ++V D IA+EEIFGPV +I FK +E IE ANDT+YGLA+G+
Sbjct: 310 RLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGV 369
Query: 544 VTTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
T +++ A A + AG+ + P APFGG K+SGIGRE G L+EYTE KT
Sbjct: 370 FTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKT 429
Query: 596 VTE 598
VT
Sbjct: 430 VTI 432
Score = 205 bits (524), Expect = 7e-60
Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
+ A +VL YI+ +G KL GGKR +G KGYF+ PTV ++V D IA+EEIFGP
Sbjct: 282 ISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGP 341
Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-VVPQ 333
V +I FK +E IE ANDT+YGLA+G+ T +++ A A + AG+VWIN Y P
Sbjct: 342 VLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPS 401
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364
APFGG K+SGIGRE G L+EYTE KTVT
Sbjct: 402 APFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
Score = 193 bits (494), Expect = 1e-55
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E IYD FV++ VE+ A KVG+P D GP + A +VL YI+ +G
Sbjct: 243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302
Query: 131 KLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
KL GGKR +G KGYF+ PTV ++V D IA+EEIFGPV +I FK +E IE ANDT+
Sbjct: 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362
Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
YGLA+G+ T +++ A A + AG+V
Sbjct: 363 YGLAAGVFTRDLERALRVAERLEAGTV 389
Score = 85.0 bits (211), Expect = 2e-17
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+ AWK PALAAG V+LKP+E TPLTAL +A L +AG P GV++V+ G G
Sbjct: 112 LAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGD 164
>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde
dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent
aldehyde dehydrogenase (AldA) of Aspergillus nidulans
(locus AN0554), and other similar sequences, are present
in this CD.
Length = 481
Score = 281 bits (721), Expect = 3e-88
Identities = 135/274 (49%), Positives = 180/274 (65%), Gaps = 23/274 (8%)
Query: 342 SGIGRELGKAALDEYTELKTV--TESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
SG GR G A+ + ++ V T S L +M AAA SNLK+V+LELGGKSP ++
Sbjct: 208 SGYGRTCG-NAISSHMDIDKVAFTGSTL---VGRKVMEAAAKSNLKKVTLELGGKSPNIV 263
Query: 400 CADADVDMAYYYC----------FVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
DAD++ A + CAGSR YVQE IYD FVK+ EKA KVGDPF +
Sbjct: 264 FDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAE 323
Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 509
QGPQV + ++++YI+SG +G +E GGKR G++GYFIEPT+F++VT+D KI +
Sbjct: 324 DTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVK 383
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---- 565
EEIFGPV +IKFKT +E I+RAND+ YGLA+ + T NI+ A A+A+ AG+ V
Sbjct: 384 EEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYN 443
Query: 566 ---PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
Q PFGG+K+SGIGRELG+ AL+ YT++K V
Sbjct: 444 LLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
Score = 255 bits (654), Expect = 3e-78
Identities = 141/378 (37%), Positives = 194/378 (51%), Gaps = 76/378 (20%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
M AWK PALAAG ++LKP+E TPL+ALY+ L +AGFP GVI+V+ GYG
Sbjct: 160 MCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYG-------- 211
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---- 116
R G+ ++ +D V FT
Sbjct: 212 ---------------------------------RTCGN----AISSHMDIDKVAFTGSTL 234
Query: 117 ---KVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFK-----IAREEI 165
KV+ + LE GGK D V++ F A I
Sbjct: 235 VGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRI 294
Query: 166 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG-SVDAEMFTKV 224
+ VQ I K + E+A K G + FA G V + ++
Sbjct: 295 Y--VQEGIYDKFVKRFKEKAKKLKVG-------------DPFAEDTFQGPQVSQIQYERI 339
Query: 225 LNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 284
++YI+SG +G +E GGKR G++GYFIEPT+F++VT+D KI +EEIFGPV +IKFKT
Sbjct: 340 MSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399
Query: 285 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGI 344
+E I+RAND+ YGLA+ + T NI+ A A+A+ AG+VW+NCY + Q PFGG+K+SGI
Sbjct: 400 EEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGI 459
Query: 345 GRELGKAALDEYTELKTV 362
GRELG+ AL+ YT++K V
Sbjct: 460 GRELGEYALENYTQIKAV 477
>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde
dehydrogenase and ALDH family members 5A1 and 5F1-like.
Succinate-semialdehyde dehydrogenase, mitochondrial
(SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent
oxidation of succinate semialdehyde (SSA) to succinate.
This group includes the human aldehyde dehydrogenase
family 5 member A1 (ALDH5A1) which is a mitochondrial
homotetramer that converts SSA to succinate in the last
step of 4-aminobutyric acid (GABA) catabolism. This CD
also includes the Arabidopsis SSADH gene product
ALDH5F1. Mutations in this gene result in the
accumulation of H2O2, suggesting a role in plant defense
against the environmental stress of elevated reactive
oxygen species.
Length = 451
Score = 267 bits (685), Expect = 3e-83
Identities = 112/242 (46%), Positives = 142/242 (58%), Gaps = 21/242 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYV 422
++ A AA +KRVSLELGG +P ++ DAD+D +A + C VCA +R YV
Sbjct: 211 LLMAQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTC-VCA-NRIYV 268
Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
E IYD FV+K VE+ KVG+ D+ GP ++ KV ++ V +G K+ G
Sbjct: 269 HESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTG 328
Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
GKR G GYF EPTV ++VTDD I EE FGPV II F T DEVI RANDT YGLA+
Sbjct: 329 GKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAY 388
Query: 543 IVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKT 595
+ T ++ A A A IN G +APFGG KESG+GRE GK L+EY E K
Sbjct: 389 VFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKY 448
Query: 596 VT 597
V+
Sbjct: 449 VS 450
Score = 185 bits (473), Expect = 2e-52
Identities = 77/153 (50%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
IN +V+ KV ++ V +G K+ GGKR G GYF EPTV ++VTDD I EE
Sbjct: 303 INERAVE-----KVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
FGPV II F T DEVI RANDT YGLA+ + T ++ A A A+ AG V IN
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 331 VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
+APFGG KESG+GRE GK L+EY E K V+
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450
Score = 182 bits (464), Expect = 5e-51
Identities = 71/155 (45%), Positives = 91/155 (58%), Gaps = 4/155 (2%)
Query: 62 SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
+C+ +R YV E IYD FV+K VE+ KVG+ D+ GP ++ KV
Sbjct: 259 TCVCA----NRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEAL 314
Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
++ V +G K+ GGKR G GYF EPTV ++VTDD I EE FGPV II F T DEV
Sbjct: 315 VEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEV 374
Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
I RANDT YGLA+ + T ++ A A A+ AG V
Sbjct: 375 IARANDTPYGLAAYVFTRDLARAWRVAEALEAGMV 409
Score = 87.5 bits (218), Expect = 3e-18
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
M+ K PALAAGC V+LKPAE+TPL+AL +A L ++AG P GV++V+ G
Sbjct: 133 MITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTG 182
>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy
production and conversion].
Length = 472
Score = 266 bits (682), Expect = 2e-82
Identities = 117/250 (46%), Positives = 152/250 (60%), Gaps = 25/250 (10%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMA--------YYY----CFVCAGSRTY 421
+AAAAA+NLK V+LELGGKSP ++ DAD+D A ++ C A SR
Sbjct: 226 RAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRC--TAASRLI 283
Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
V E +YD FV++ V +AA+ KVGDP D S GP + E +V YI+ V +G +L A
Sbjct: 284 VHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLA 343
Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
GGKR G GYF+EPT+ VT D +IAREEIFGPV +I+FK +E IE ANDT+YGLA+
Sbjct: 344 GGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAA 401
Query: 542 GIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAALDEYTE 592
I T ++ A A + AG A + PFGG K+SG+GRE GK L+E+TE
Sbjct: 402 AIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTE 461
Query: 593 LKTVTESPLR 602
+KTVT
Sbjct: 462 VKTVTIKLGP 471
Score = 234 bits (600), Expect = 2e-70
Identities = 137/395 (34%), Positives = 179/395 (45%), Gaps = 99/395 (25%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
+ AWK PALAAG V+LKP+EQTPL+AL +A L +AG P GV++V+ G G
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGG-------- 200
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---K 117
+VGD P VDA+ FT
Sbjct: 201 ---------------------------------AEVGDALVAH----PDVDAISFTGSTA 223
Query: 118 VLNYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 174
V I + K LE GGK P + V +D + V +
Sbjct: 224 VGRAIAAAAAANLKPVTLELGGK---------SPAI---VLEDADLDAA-----VDAAVF 266
Query: 175 FKTL-------------------DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS 215
DE +ER AS V +D + I+
Sbjct: 267 GAFFNAGQRCTAASRLIVHESVYDEFVERLVAR---AASLKVGDPLDPSTDLGPLISEEQ 323
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+D +V YI+ V +G +L AGGKR G GYF+EPT+ VT D +IAREEIFGPV
Sbjct: 324 LD-----RVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPV 376
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AVVPQ 333
+I+FK +E IE ANDT+YGLA+ I T ++ A A + AG V IN Y A +
Sbjct: 377 LPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAY 436
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTESPLR 368
PFGG K+SG+GRE GK L+E+TE+KTVT
Sbjct: 437 LPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLGP 471
>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
PuuC-like. NADP+-dependent,
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
(GABALDH) PuuC of Escherichia coli which catalyzes the
conversion of putrescine to 4-aminobutanoate and other
similar sequences are present in this CD.
Length = 462
Score = 266 bits (681), Expect = 2e-82
Identities = 139/390 (35%), Positives = 185/390 (47%), Gaps = 97/390 (24%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
M AWK PALAAG V+LKPAEQ+PLTAL +A L +AG P GV++V+PG+G
Sbjct: 140 MAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGH------- 192
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---- 116
+A VDA+ FT
Sbjct: 193 --------------------------TAGEALGLH------------MDVDALAFTGSTE 214
Query: 117 ---KVLNYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGP-- 168
+ L Y SG + K LE GGK I VF++ D A G
Sbjct: 215 VGRRFLEY--SG-QSNLKRVWLECGGKSP-----NI---VFADAPDLDAAAEAAAAGIFW 263
Query: 169 -------------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS 215
V IK + L++V+ A + K G + A G+
Sbjct: 264 NQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPG-------------DPLDPATRMGA 310
Query: 216 -VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIF 272
V F KVL YI+SG +G +L AGGKR G+F+EPTVF VT D +IAREEIF
Sbjct: 311 LVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIF 370
Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
GPV ++I F + +E + AND+ YGLA+ + T+++ A+ A + AG+VW+NC+
Sbjct: 371 GPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDI 430
Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTV 362
PFGGFK+SG GR+ ALD+YTELKT
Sbjct: 431 TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
Score = 253 bits (649), Expect = 9e-78
Identities = 109/241 (45%), Positives = 141/241 (58%), Gaps = 20/241 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADAD-----VDMAYYYCF-----VC-AGSRTYVQE 424
+ + SNLKRV LE GGKSP ++ ADA + A F VC AGSR V E
Sbjct: 220 LEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHE 279
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
I D F++K V A K GDP D + + G V F KVL YI+SG +G +L AGGK
Sbjct: 280 SIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGK 339
Query: 485 R--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
R G+F+EPTVF VT D +IAREEIFGPV ++I F + +E + AND+ YGLA+
Sbjct: 340 RVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAAS 399
Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
+ T+++ A+ A + AG+ V PFGGFK+SG GR+ ALD+YTELKT
Sbjct: 400 VWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKT 459
Query: 596 V 596
Sbjct: 460 T 460
>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8
member A1-like. In humans, the aldehyde dehydrogenase
family 8 member A1 (ALDH8A1) protein functions to
convert 9-cis-retinal to 9-cis-retinoic acid and has a
preference for NAD+. Also included in this CD is the
2-hydroxymuconic semialdehyde dehydrogenase (HMSADH)
which catalyzes the conversion of 2-hydroxymuconic
semialdehyde to 4-oxalocrotonate, a step in the meta
cleavage pathway of aromatic hydrocarbons in bacteria.
Such HMSADHs seen here are: XylG of the TOL plasmid pWW0
of Pseudomonas putida, TomC of Burkholderia cepacia G4,
and AphC of Comamonas testosterone.
Length = 455
Score = 263 bits (674), Expect = 2e-81
Identities = 120/279 (43%), Positives = 162/279 (58%), Gaps = 30/279 (10%)
Query: 343 GIGRELGKAALDEYTELKTVT---ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
G G E G AAL + ++ ++ E+ T +IM AAA NLK VSLELGGK+P ++
Sbjct: 182 GFGPEAG-AALVAHPDVDLISFTGETA----TGRTIMRAAAP-NLKPVSLELGGKNPNIV 235
Query: 400 CADADVDMAY------YYCF---VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
ADAD+D A + VC AGSR VQ IYD F+++ VE+A A KVGDP D
Sbjct: 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDP 295
Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDDF 505
+ GP + E KVL Y++ +G + GG R + GYF+EPTV + + +D
Sbjct: 296 DTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDS 355
Query: 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV 565
++A+EEIFGPV T+I F +E IE ANDT YGLA+ + T ++ A+ A + AG+ V
Sbjct: 356 RVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWV 415
Query: 566 P-------QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+ PFGG K SGIGRE G +L+ YTELK V
Sbjct: 416 NCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454
Score = 180 bits (459), Expect = 2e-50
Identities = 66/145 (45%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
KVL Y++ +G + GG R + GYF+EPTV + + +D ++A+EEIFGPV T+
Sbjct: 310 KVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTV 369
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
I F +E IE ANDT YGLA+ + T ++ A+ A + AG+VW+NC+ + PFGG
Sbjct: 370 IPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGG 429
Query: 339 FKESGIGRELGKAALDEYTELKTVT 363
K SGIGRE G +L+ YTELK V
Sbjct: 430 VKASGIGREGGDYSLEFYTELKNVC 454
Score = 176 bits (448), Expect = 6e-49
Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR VQ IYD F+++ VE+A A KVGDP D + GP + KVL Y++ +G
Sbjct: 264 SRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGA 323
Query: 131 KLEAGGKRKG----DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
+ GG R + GYF+EPTV + + +D ++A+EEIFGPV T+I F +E IE AN
Sbjct: 324 TILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELAN 383
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
DT YGLA+ + T ++ A+ A + AG+V
Sbjct: 384 DTPYGLAAYVWTRDLGRAHRVARRLEAGTV 413
Score = 75.7 bits (187), Expect = 2e-14
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 1 MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
ML WK PALA G V+LKP+E TPLTA +A L +AG P GV++V+ G+GP
Sbjct: 132 MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGP 185
>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.
Length = 488
Score = 262 bits (671), Expect = 1e-80
Identities = 108/249 (43%), Positives = 149/249 (59%), Gaps = 26/249 (10%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRT 420
T +MAAAAAS LK V++ELGGKSPL++ DAD+D +A +Y VC G+R
Sbjct: 232 TGKKVMAAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRV 290
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
+VQ+ I F + +E+ ++GDP D + GP V KVL YI+ G +G +L
Sbjct: 291 FVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLL 350
Query: 481 AGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
GG+R G F+ PTVF++ TDD I REEIFGPV +++ F DEVI RANDT+
Sbjct: 351 CGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTE 410
Query: 537 YGLASGIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAAL 587
YGLA+G+ T ++ A+ H + AG S + P GG+K+SGIGRE G A L
Sbjct: 411 YGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPA--EMPVGGYKQSGIGRENGIATL 468
Query: 588 DEYTELKTV 596
+ YT++K+V
Sbjct: 469 EHYTQIKSV 477
Score = 189 bits (483), Expect = 2e-53
Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
KVL YI+ G +G +L GG+R G F+ PTVF++ TDD I REEIFGPV ++
Sbjct: 334 KVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSV 393
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
+ F DEVI RANDT+YGLA+G+ T ++ A+ H + AG WIN + + P GG
Sbjct: 394 LTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGG 453
Query: 339 FKESGIGRELGKAALDEYTELKTV 362
+K+SGIGRE G A L+ YT++K+V
Sbjct: 454 YKQSGIGRENGIATLEHYTQIKSV 477
Score = 171 bits (435), Expect = 8e-47
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R +VQ+ I F + +E+ ++GDP D + GP V KVL YI+ G +G +
Sbjct: 289 RVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGAR 348
Query: 132 LEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
L GG+R G F+ PTVF++ TDD I REEIFGPV +++ F DEVI RAND
Sbjct: 349 LLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARAND 408
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAG 214
T+YGLA+G+ T ++ A+ H + AG
Sbjct: 409 TEYGLAAGVFTADLSRAHRVIHQLEAG 435
Score = 66.1 bits (162), Expect = 2e-11
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
WK PALAAG ++ KP+E TPLTAL +A + +AG PDGV +V+ G G
Sbjct: 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG 209
>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter
aldehyde dehydrogenase, DhaS-like. Uncharacterized
aldehyde dehydrogenase from Candidatus pelagibacter
(DhaS) and other related sequences are present in this
CD.
Length = 457
Score = 260 bits (666), Expect = 3e-80
Identities = 110/242 (45%), Positives = 147/242 (60%), Gaps = 21/242 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFV-----C-AGSRTYVQED 425
+A AAA NL V+LELGGKSP ++ DAD+D A F C AGSR VQ
Sbjct: 214 IARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRS 273
Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
IYD FV++ V +A A +VGDP D Q GP KV Y+ E+G ++ GG+R
Sbjct: 274 IYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGER 333
Query: 486 ----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
GYF EPT+ ++VT+D +IA+EE+FGPV ++I F +E I AND++YGLA+
Sbjct: 334 PSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAA 393
Query: 542 GIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
GI T ++ A+ A AI AG+ A+ P +PFGGFK+SGIGRE G A+ EYT+ K
Sbjct: 394 GIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTK 453
Query: 595 TV 596
+V
Sbjct: 454 SV 455
Score = 190 bits (486), Expect = 4e-54
Identities = 70/144 (48%), Positives = 100/144 (69%), Gaps = 4/144 (2%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
KV Y+ E+G ++ GG+R GYF EPT+ ++VT+D +IA+EE+FGPV ++
Sbjct: 312 KVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSV 371
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGG 338
I F +E I AND++YGLA+GI T ++ A+ A AI AG+VW+N Y+A+ P +PFGG
Sbjct: 372 IPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGG 431
Query: 339 FKESGIGRELGKAALDEYTELKTV 362
FK+SGIGRE G A+ EYT+ K+V
Sbjct: 432 FKDSGIGRENGIEAIREYTQTKSV 455
Score = 175 bits (446), Expect = 1e-48
Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR VQ IYD FV++ V +A A +VGDP D Q GP KV Y+ E+G
Sbjct: 266 SRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGA 325
Query: 131 KLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
++ GG+R GYF EPT+ ++VT+D +IA+EE+FGPV ++I F +E I AN
Sbjct: 326 RVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALAN 385
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
D++YGLA+GI T ++ A+ A AI AG+V
Sbjct: 386 DSEYGLAAGIWTRDLARAHRVARAIEAGTV 415
Score = 86.5 bits (215), Expect = 5e-18
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+LA K PALAAG V+LKP+E TP + L +A L ++AGFP GV++V+ G+GP
Sbjct: 135 LLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGP 187
>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent
4-trimethylaminobutyraldehyde dehydrogenase, ALDH family
9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde
dehydrogenase (TMABADH, EC=1.2.1.47), also known as
aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in
humans, is a cytosolic tetramer which catalyzes the
oxidation of gamma-aminobutyraldehyde involved in
4-aminobutyric acid (GABA) biosynthesis and also
oxidizes betaine aldehyde
(gamma-trimethylaminobutyraldehyde) which is involved in
carnitine biosynthesis.
Length = 457
Score = 256 bits (656), Expect = 6e-79
Identities = 106/248 (42%), Positives = 151/248 (60%), Gaps = 23/248 (9%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYYCF--VCA-GSRT 420
T +M+AAA +K V+LELGGKSPL+I DAD++ MA + VC+ G+R
Sbjct: 206 TGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRV 264
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
+VQ I D F ++ VE+ ++GDP D+ Q G + E KVL YI+S ++G K+
Sbjct: 265 FVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVL 324
Query: 481 AGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
GG+R + G+++ P V ++ TDD I REEIFGPV +I+ F T +EVI RANDT
Sbjct: 325 CGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDT 384
Query: 536 KYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALD 588
YGLA+G+ T ++ A+ + AG+ + + PFGG+K+SG GRE G AAL+
Sbjct: 385 TYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALE 444
Query: 589 EYTELKTV 596
YT+LKTV
Sbjct: 445 HYTQLKTV 452
Score = 187 bits (476), Expect = 7e-53
Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 19/200 (9%)
Query: 169 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNY 227
VQ IK + + ++ER + G + G+ + E KVL Y
Sbjct: 266 VQRSIKDEFTERLVERTKKIRIG-------------DPLDEDTQMGALISEEHLEKVLGY 312
Query: 228 IKSGVEQGGKLEAGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 282
I+S ++G K+ GG+R + G+++ P V ++ TDD I REEIFGPV +I+ F
Sbjct: 313 IESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFD 372
Query: 283 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKES 342
T +EVI RANDT YGLA+G+ T ++ A+ + AG+ WIN Y + PFGG+K+S
Sbjct: 373 TEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQS 432
Query: 343 GIGRELGKAALDEYTELKTV 362
G GRE G AAL+ YT+LKTV
Sbjct: 433 GFGRENGTAALEHYTQLKTV 452
Score = 169 bits (430), Expect = 3e-46
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
+R +VQ I D F ++ VE+ ++GDP D+ Q G + KVL YI+S ++G
Sbjct: 262 TRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGA 321
Query: 131 KLEAGGKR-----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
K+ GG+R + G+++ P V ++ TDD I REEIFGPV +I+ F T +EVI RA
Sbjct: 322 KVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRA 381
Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
NDT YGLA+G+ T ++ A+ + AG+
Sbjct: 382 NDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412
Score = 62.7 bits (153), Expect = 2e-10
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
+WK PALA G ++ KP+ TPLTAL +A + +AG PDGV +V+ G G
Sbjct: 134 SWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG 183
>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid
dehydrogenase-like. The 6-oxolauric acid dehydrogenase
(CddD) from Rhodococcus ruber SC1 which converts
6-oxolauric acid to dodecanedioic acid, and the aldehyde
dehydrogenase (locus SSP0762) from Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305 and other
similar sequences, are included in this CD.
Length = 466
Score = 253 bits (649), Expect = 1e-77
Identities = 102/240 (42%), Positives = 138/240 (57%), Gaps = 19/240 (7%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGSRTYVQEDI 426
A AAA +KRV+LELGGKS +I DAD++ A CF C A +R V
Sbjct: 226 AEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSR 285
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
Y + A A A VGDP D + GP A F +V YI+ G+E+G +L AGG +
Sbjct: 286 YAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGR 345
Query: 487 G---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
++GYF++PTVF++VT D IAREEIFGPV +II + DE I ANDT YGLA +
Sbjct: 346 PEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYV 405
Query: 544 VTTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+ + + A A + AG + P APFGG+K+SG GRE G+ L+E+ E+K++
Sbjct: 406 WSADPERARAVARRLRAGQVHINGAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
Score = 182 bits (465), Expect = 4e-51
Identities = 70/151 (46%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIF 272
A F +V YI+ G+E+G +L AGG + ++GYF++PTVF++VT D IAREEIF
Sbjct: 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIF 375
Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
GPV +II + DE I ANDT YGLA + + + + A A + AG V IN A P
Sbjct: 376 GPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHIN-GAAFNP 434
Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
APFGG+K+SG GRE G+ L+E+ E+K++
Sbjct: 435 GAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
Score = 168 bits (429), Expect = 5e-46
Identities = 66/159 (41%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 62 SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
SC +P +R V Y + A A A VGDP D + GP A F +V Y
Sbjct: 272 SCNAP----TRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGY 327
Query: 122 IKSGVEQGGKLEAGGKRKG---DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 178
I+ G+E+G +L AGG + ++GYF++PTVF++VT D IAREEIFGPV +II +
Sbjct: 328 IQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387
Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVD 217
DE I ANDT YGLA + + + + A A + AG V
Sbjct: 388 DEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVH 426
Score = 69.1 bits (170), Expect = 3e-12
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 5 KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
K PALAAGC V+LKP+E PL+A+ +A + +AG P GV +++ G GP
Sbjct: 150 KVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGP 198
>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine
aldehyde dehydrogenase-like. Included in this CD is the
NAD+-dependent, betaine aldehyde dehydrogenase (BADH,
GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the
synthesis of the osmoprotectant glycine betaine from
choline or glycine betaine aldehyde.
Length = 482
Score = 253 bits (649), Expect = 2e-77
Identities = 112/247 (45%), Positives = 148/247 (59%), Gaps = 22/247 (8%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRT 420
T SIM AAA N+K+V+LELGGK+P ++ ADAD + A VC AGSR
Sbjct: 225 TGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRL 283
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
V+E I+D FV E+A K+G+ D + GP V AE KVL+YI+ G E+G +L
Sbjct: 284 LVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLV 343
Query: 481 AGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
GGKR KGYF+EPT+F +V +I +EEIFGPV T+ +F T +E I ANDT
Sbjct: 344 CGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTP 403
Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDE 589
YGLA + T +I AN A + AG+ + +AP+GG+K+SGIGRELG L+E
Sbjct: 404 YGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEE 463
Query: 590 YTELKTV 596
Y E K +
Sbjct: 464 YQETKHI 470
Score = 236 bits (604), Expect = 6e-71
Identities = 133/390 (34%), Positives = 178/390 (45%), Gaps = 97/390 (24%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
AWK PALAAG V++KP+E TPLT + + L ++AG P GV++++ G G
Sbjct: 150 QAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGA------- 202
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
VG +S P VD V FT
Sbjct: 203 ----------------------------------TVGAELAES----PDVDLVSFTGGTA 224
Query: 121 YIKSGVEQGGK------LEAGGKRKGDKGYFIEPT-VFSNVTDDFKIAREE-IFGP---- 168
+S + LE GGK P VF++ DF+ A ++ + G
Sbjct: 225 TGRSIMRAAAGNVKKVALELGGK---------NPNIVFADA--DFETAVDQALNGVFFNA 273
Query: 169 -----------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-V 216
V+ I K + + ERA K G N G V
Sbjct: 274 GQVCSAGSRLLVEESIHDKFVAALAERAKKIKLG-------------NGLDADTEMGPLV 320
Query: 217 DAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIF 272
AE KVL+YI+ G E+G +L GGKR KGYF+EPT+F +V +I +EEIF
Sbjct: 321 SAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIF 380
Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
GPV T+ +F T +E I ANDT YGLA + T +I AN A + AG+VWIN Y
Sbjct: 381 GPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFA 440
Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTV 362
+AP+GG+K+SGIGRELG L+EY E K +
Sbjct: 441 EAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone
dehydrogenase-like. Included in this CD is the
L-sorbosone dehydrogenase (SNDH) from Gluconobacter
oxydans UV10. In G. oxydans, D-sorbitol is converted to
2-keto-L-gulonate (a precursor of L-ascorbic acid) in
sequential oxidation steps catalyzed by a FAD-dependent,
L-sorbose dehydrogenase and an NAD(P)+-dependent,
L-sorbosone dehydrogenase.
Length = 454
Score = 248 bits (636), Expect = 5e-76
Identities = 113/239 (47%), Positives = 151/239 (63%), Gaps = 18/239 (7%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA-----YYYCF----VC-AGSRTYVQEDI 426
AAAAA NLK+VSLELGGK+P ++ ADAD+D A + F C +GSR V E I
Sbjct: 215 AAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESI 274
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR- 485
D FV V ++ +VGDP D + G ++ K+ +Y+ +G +G L GG+R
Sbjct: 275 ADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERL 334
Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
G F +PT+F++VT D IAREEIFGPV +++ F T+DE I ANDT YGL++G+ +
Sbjct: 335 ASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWS 394
Query: 546 TNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+IDTA T A I AG+ V P+ PFGGFK+SGIGRELG+ ++EYTELKTV
Sbjct: 395 KDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453
Score = 183 bits (466), Expect = 2e-51
Identities = 74/149 (49%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
++ K+ +Y+ +G +G L GG+R G F +PT+F++VT D IAREEIFGP
Sbjct: 305 INEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGP 364
Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA 334
V +++ F T+DE I ANDT YGL++G+ + +IDTA T A I AG+VW+N + P+
Sbjct: 365 VLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPEL 424
Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
PFGGFK+SGIGRELG+ ++EYTELKTV
Sbjct: 425 PFGGFKQSGIGRELGRYGVEEYTELKTVH 453
Score = 156 bits (396), Expect = 1e-41
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E I D FV V ++ +VGDP D + G ++ K+ +Y+ +G +G
Sbjct: 266 SRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGA 325
Query: 131 KLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
L GG+R G F +PT+F++VT D IAREEIFGPV +++ F T+DE I ANDT
Sbjct: 326 TLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTV 385
Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
YGL++G+ + +IDTA T A I AG+V
Sbjct: 386 YGLSAGVWSKDIDTALTVARRIRAGTV 412
Score = 60.0 bits (146), Expect = 2e-09
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
ALAAGC V++KP+E T T L +A L +AG P GV++++ GYG
Sbjct: 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYG 186
>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde
dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent
Saccharomyces cerevisiae aldehyde dehydrogenase 2
(YMR170c, ALD5, EC=1.2.1.5) and other similar sequences,
are present in this CD.
Length = 484
Score = 246 bits (631), Expect = 6e-75
Identities = 112/243 (46%), Positives = 143/243 (58%), Gaps = 21/243 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----------CAGSRTYVQE 424
++ AAA NLK V+LE GGKSP ++ DAD+D A + A SR YVQE
Sbjct: 238 LVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQE 297
Query: 425 DIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
IYD FV+K VE KVG PFD GPQV + +VL+YI+ G ++G KL GG
Sbjct: 298 SIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG 357
Query: 484 ---KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
KGYFI PT+F++V D +I +EEIFGPV I KFKT +E I++ANDT YGLA
Sbjct: 358 EKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLA 417
Query: 541 SGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTEL 593
+ + T +I A+ A + AG + PFGGFK SGIGRELG+ L+ YT+
Sbjct: 418 AAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQT 477
Query: 594 KTV 596
K V
Sbjct: 478 KAV 480
Score = 174 bits (443), Expect = 6e-48
Identities = 77/170 (45%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
Query: 197 VTTNIDTANTFAHAINAG-SVDAEMFTKVLNYIKSGVEQGGKLEAGG---KRKGDKGYFI 252
V N + F G V + +VL+YI+ G ++G KL GG KGYFI
Sbjct: 311 VKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFI 370
Query: 253 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 312
PT+F++V D +I +EEIFGPV I KFKT +E I++ANDT YGLA+ + T +I A+
Sbjct: 371 PPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHR 430
Query: 313 FAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
A + AG VWIN PFGGFK SGIGRELG+ L+ YT+ K V
Sbjct: 431 VARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
Score = 169 bits (429), Expect = 5e-46
Identities = 74/150 (49%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAAR-KVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
SR YVQE IYD FV+K VE KVG PFD GPQV + +VL+YI+ G ++G
Sbjct: 291 SRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEG 350
Query: 130 GKLEAGG---KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
KL GG KGYFI PT+F++V D +I +EEIFGPV I KFKT +E I++AN
Sbjct: 351 AKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKAN 410
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
DT YGLA+ + T +I A+ A + AG V
Sbjct: 411 DTTYGLAAAVFTKDIRRAHRVARELEAGMV 440
Score = 83.2 bits (206), Expect = 8e-17
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK PALAAG V++KPAE TPL+ LY A L ++AGFP GV++++PGYG
Sbjct: 160 MAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGA 212
>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic
semialdehyde dehydrogenase-like. 4-hydroxymuconic
semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of
Pseudomonas fluorescens ACB involved in
4-hydroxyacetophenone degradation, and putative
hydroxycaproate semialdehyde dehydrogenase (ChnE) of
Brachymonas petroleovorans involved in cyclohexane
metabolism, and other similar sequences, are present in
this CD.
Length = 453
Score = 245 bits (627), Expect = 1e-74
Identities = 119/273 (43%), Positives = 167/273 (61%), Gaps = 24/273 (8%)
Query: 343 GIGRELGKAALDEYTELKTV--TESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
G G G AAL E+ ++ + T S IM AA NLKRVSLELGGKS ++
Sbjct: 182 GFGEVAG-AALVEHPDVDKITFTGST---AVGRKIMQGAAG-NLKRVSLELGGKSANIVF 236
Query: 401 ADADVDMA---------YYYCFVC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
ADAD+D A Y +C AGSR V E IYD F+++ A + + GDP D
Sbjct: 237 ADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPK 296
Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIARE 510
Q GP V F +VL+Y+ G E+G +L GGKR G +G+F+EPT+F+ V + +IA+E
Sbjct: 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQE 356
Query: 511 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-------A 563
EIFGPV ++++F+ +E + AN T+YGLA+G+ T ++ A+ A A+ AG+
Sbjct: 357 EIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNR 416
Query: 564 VVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
P +PFGG+K+SG GRE+G+ ALDEYTE+K+V
Sbjct: 417 FDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
Score = 186 bits (474), Expect = 1e-52
Identities = 72/147 (48%), Positives = 107/147 (72%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
V F +VL+Y+ G E+G +L GGKR G +G+F+EPT+F+ V + +IA+EEIFGPV
Sbjct: 303 VSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPV 362
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
++++F+ +E + AN T+YGLA+G+ T ++ A+ A A+ AG+VWIN Y P +P
Sbjct: 363 VSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSP 422
Query: 336 FGGFKESGIGRELGKAALDEYTELKTV 362
FGG+K+SG GRE+G+ ALDEYTE+K+V
Sbjct: 423 FGGYKQSGFGREMGREALDEYTEVKSV 449
Score = 163 bits (415), Expect = 3e-44
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E IYD F+++ A + + GDP D Q GP V F +VL+Y+ G E+G
Sbjct: 264 SRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGA 323
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+L GGKR G +G+F+EPT+F+ V + +IA+EEIFGPV ++++F+ +E + AN T+Y
Sbjct: 324 RLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEY 383
Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 246
GLA+G+ T ++ A+ A A+ AG+V + N G GG ++G R+
Sbjct: 384 GLAAGVWTRDLGRAHRVAAALKAGTV----WINTYNRFDPGSPFGGYKQSGFGREM 435
Score = 80.9 bits (200), Expect = 3e-16
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
AWK PALAAG V+LKPAE TPL+AL +A L +AGFP GV++V+ G+G
Sbjct: 133 FAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFG 184
>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent
benzaldehyde dehydrogenase II, vanillin dehydrogenase,
p-hydroxybenzaldehyde dehydrogenase and related
proteins. ALDH subfamily which includes the
NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC,
BenzADH, EC=1.2.1.28) involved in the oxidation of
benzyl alcohol to benzoate; p-hydroxybenzaldehyde
dehydrogenase (PchA, HBenzADH) which catalyzes the
oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic
acid; vanillin dehydrogenase (Vdh, VaniDH) involved in
the metabolism of ferulic acid as seen in Pseudomonas
putida KT2440; and other related sequences.
Length = 431
Score = 242 bits (620), Expect = 7e-74
Identities = 94/239 (39%), Positives = 132/239 (55%), Gaps = 21/239 (8%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQEDI 426
A +LK+V+LELGG +PL++ DAD+D+A + +C A R V E +
Sbjct: 195 GELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESV 254
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
YD FV+K V KA A VGDP D GP ++ +V ++ V G +L GG +
Sbjct: 255 YDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE 314
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
G F +PTV S+VT D I REEIFGPV +I F +E +E ANDT+YGL++ + T
Sbjct: 315 GL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTR 371
Query: 547 NIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+++ A FA + G + P PFGG K SG GR G A+L+E+TE + +T
Sbjct: 372 DLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430
Score = 161 bits (409), Expect = 1e-43
Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
R V E +YD FV+K V KA A VGDP D GP ++ +V ++ V G
Sbjct: 246 GRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGA 305
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+L GG +G F +PTV S+VT D I REEIFGPV +I F +E +E ANDT+Y
Sbjct: 306 RLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEY 362
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL++ + T +++ A FA + G V
Sbjct: 363 GLSAAVFTRDLERAMAFAERLETGMV 388
Score = 159 bits (405), Expect = 4e-43
Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 11/155 (7%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
IN VD +V ++ V G +L GG +G F +PTV S+VT D I REE
Sbjct: 285 INERQVD-----RVHAIVEDAVAAGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREE 336
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
IFGPV +I F +E +E ANDT+YGL++ + T +++ A FA + G V IN Q V
Sbjct: 337 IFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHIND-QTV 395
Query: 331 V--PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
P PFGG K SG GR G A+L+E+TE + +T
Sbjct: 396 NDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430
Score = 55.2 bits (134), Expect = 5e-08
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 7 GPALAAGCPVLLKPAEQTPLT-ALYVAALTQQAGFPDGVISVLPG 50
PALA G V+LKP +TP+T L +A + ++AG P GV++V+PG
Sbjct: 120 APALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPG 164
>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent
alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like.
Kinetic studies of the Bacillus subtilis ALDH-like ycbD
protein, which is involved in d-glucarate/d-galactarate
utilization, reveal that it is a NADP+-dependent,
alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH).
KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent
conversion of KGSA to alpha-ketoglutarate.
Interestingly, the NADP+-dependent, tetrameric,
2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an
enzyme involved in the catabolic pathway for D-arabinose
in Sulfolobus solfataricus, also clusters in this group.
This CD shows a distant phylogenetic relationship to the
Azospirillum brasilense KGSADH-II (-III) group.
Length = 473
Score = 242 bits (619), Expect = 3e-73
Identities = 117/279 (41%), Positives = 159/279 (56%), Gaps = 32/279 (11%)
Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHS----IMAAAAASNLKRVSLELGGKSPLV 398
G G E+G AL E+ ++ V S+T + +AAAAA+ RV LE+GGK+PLV
Sbjct: 200 GSGSEVG-QALVEHPDVDAV------SFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLV 252
Query: 399 ICADAD----VDMAYYYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
+ DAD V+ A F G SR V E I+D FV+ VE+ A KVGD D
Sbjct: 253 VLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALD 312
Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFK 506
+ V GP V K L YI+ +G KL GG+R + D+GY++ P +F+ VT+D +
Sbjct: 313 EGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMR 372
Query: 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV- 565
IAREEIFGPV +I+ + DE + ANDT++GL++GIVTT++ A F + AG +V
Sbjct: 373 IAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVN 432
Query: 566 -------PQAPFGGFKESGIG-RELGKAALDEYTELKTV 596
PFGG K S G RE G+AAL+ YT +KTV
Sbjct: 433 LPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
Score = 202 bits (516), Expect = 3e-58
Identities = 125/393 (31%), Positives = 173/393 (44%), Gaps = 107/393 (27%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS 62
AWK PALA G V+ KPAE TP +A + + ++AG P GV +++ G G
Sbjct: 153 AWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSG---------- 202
Query: 63 CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---KVL 119
+VG ++ + P VDAV FT V
Sbjct: 203 -------------------------------SEVGQ----ALVEHPDVDAVSFTGSTAVG 227
Query: 120 NYIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTD--DFKIAREEI----FGP-- 168
I + G LE GGK P V V D D +A E F
Sbjct: 228 RRIAAAAAARGARVQLEMGGK---------NPLV---VLDDADLDLAVECAVQGAFFSTG 275
Query: 169 ----------VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS--- 215
V I + ++ ++ER K G A++ G
Sbjct: 276 QRCTASSRLIVTEGIHDRFVEALVERTKALKVG-----------------DALDEGVDIG 318
Query: 216 --VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEI 271
V K L YI+ +G KL GG+R + D+GY++ P +F+ VT+D +IAREEI
Sbjct: 319 PVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEI 378
Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA-V 330
FGPV +I+ + DE + ANDT++GL++GIVTT++ A F + AG V +N A V
Sbjct: 379 FGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGV 438
Query: 331 VPQAPFGGFKESGIG-RELGKAALDEYTELKTV 362
PFGG K S G RE G+AAL+ YT +KTV
Sbjct: 439 DYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase. Under
osmotic stress, betaine aldehyde dehydrogenase oxidizes
glycine betaine aldehyde into the osmoprotectant glycine
betaine, via the second of two oxidation steps from
exogenously supplied choline or betaine aldehyde. This
choline-glycine betaine synthesis pathway can be found
in gram-positive and gram-negative bacteria. In
Escherichia coli, betaine aldehyde dehydrogenase (betB)
is osmotically co-induced with choline dehydrogenase
(betA) in the presence of choline. These dehydrogenases
are located in a betaine gene cluster with the upstream
choline transporter (betT) and transcriptional regulator
(betI). Similar to E.coli, betaine synthesis in
Staphylococcus xylosus is also influenced by osmotic
stress and the presence of choline with genes localized
in a functionally equivalent gene cluster. Organization
of the betaine gene cluster in Sinorhizobium meliloti
and Bacillus subtilis differs from that of E.coli by the
absence of upstream choline transporter and
transcriptional regulator homologues. Additionally,
B.subtilis co-expresses a type II alcohol dehydrogenase
with betaine aldehyde dehydrogenase instead of choline
dehydrogenase as in E.coli, St.xylosus, and Si.meliloti.
Betaine aldehyde dehydrogenase is a member of the
aldehyde dehydrogenase family (pfam00171) [Cellular
processes, Adaptations to atypical conditions].
Length = 467
Score = 234 bits (598), Expect = 2e-70
Identities = 109/240 (45%), Positives = 151/240 (62%), Gaps = 21/240 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQED 425
+ AAAA +LK V++ELGGKSPL++ DAD++ A + VC G+R +V +
Sbjct: 228 IMAAAAGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKK 287
Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
I + F+ + VE+ K+GDPFD++ + GP + A KVL+YI+ G +G L GG R
Sbjct: 288 IKERFLARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGR 347
Query: 486 ----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
G+F+EPTVF++ TDD I REEIFGPV T++ F DEVI RANDT+YGLA
Sbjct: 348 PENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAG 407
Query: 542 GIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELK 594
G+ T ++ A+ A + AG+ + +APFGG+K+SGIGRE GKAAL YTE+K
Sbjct: 408 GVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
Score = 227 bits (581), Expect = 7e-68
Identities = 135/375 (36%), Positives = 175/375 (46%), Gaps = 75/375 (20%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS 62
+WK PALAAG ++ KP+E TPLTAL VA + ++AG P GV +V+ G G P
Sbjct: 151 SWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPL---- 206
Query: 63 CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYI 122
V K + F V G ++ M +
Sbjct: 207 -------------------LVNHPDVAKVS-------FTGGVPTGKKI---MAAAAGHLK 237
Query: 123 KSGVEQGGK------------LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 170
+E GGK G G +F V SN T F V
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLG--NFFSAGQVCSNGTRVF----------VH 285
Query: 171 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTKVLNYIK 229
IK + L ++ER T I + F A G + A KVL+YI+
Sbjct: 286 KKIKERFLARLVER-------------TERIKLGDPFDEATEMGPLISAAHRDKVLSYIE 332
Query: 230 SGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
G +G L GG R G+F+EPTVF++ TDD I REEIFGPV T++ F D
Sbjct: 333 KGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDED 392
Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIG 345
EVI RANDT+YGLA G+ T ++ A+ A + AG+VWIN Y +APFGG+K+SGIG
Sbjct: 393 EVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIG 452
Query: 346 RELGKAALDEYTELK 360
RE GKAAL YTE+K
Sbjct: 453 RENGKAALAHYTEVK 467
>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase,
ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase
(FTHFDH, EC=1.5.1.6), also known as aldehyde
dehydrogenase family 1 member L1 (ALDH1L1) in humans, is
a multi-domain homotetramer with an N-terminal formyl
transferase domain and a C-terminal ALDH domain. FTHFDH
catalyzes an NADP+-dependent dehydrogenase reaction
resulting in the conversion of 10-formyltetrahydrofolate
to tetrahydrofolate and CO2. The ALDH domain is also
capable of the oxidation of short chain aldehydes to
their corresponding acids.
Length = 486
Score = 232 bits (594), Expect = 1e-69
Identities = 112/242 (46%), Positives = 151/242 (62%), Gaps = 19/242 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV-----C-AGSRTYVQE 424
IM + A SNLK+VSLELGGKSPL+I AD D+D M F C A R +V+E
Sbjct: 242 IMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEE 301
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
I+D FV++ VE+ K+GDP D+S GPQ K++ Y + GV++G L GGK
Sbjct: 302 SIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK 361
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASG 542
+ G+F EPTVF++V D IA+EE FGP+ I KF +D V++RANDT+YGLASG
Sbjct: 362 QVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASG 421
Query: 543 IVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAALDEYTELKT 595
+ T +I+ A + + AG+ V APFGGFK+SG G++LG+ AL+EY + KT
Sbjct: 422 VFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKT 481
Query: 596 VT 597
VT
Sbjct: 482 VT 483
Score = 212 bits (542), Expect = 5e-62
Identities = 135/380 (35%), Positives = 193/380 (50%), Gaps = 76/380 (20%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA---- 56
MLAWK LAAG V+LKPA+ TPLTAL A LT +AGFP GVI++LPG G +
Sbjct: 163 MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLS 222
Query: 57 --PYWRKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDP---------FDKSVQ 105
P RK L + T + + I + ++K + G DK+V+
Sbjct: 223 DHPDVRK-----LGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVR 277
Query: 106 QGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEI 165
G + +V F K N I +G F+E ++ D+F + R
Sbjct: 278 MG--MSSVFFNKGENCIAAG-----------------RLFVEESIH----DEF-VRR--- 310
Query: 166 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVL 225
V+ + K K D ++R+ T+ N AH K++
Sbjct: 311 --VVEEVKKMKIGDP-LDRS-------------TDHGPQNHKAH-----------LDKLV 343
Query: 226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT-- 283
Y + GV++G L GGK+ G+F EPTVF++V D IA+EE FGP+ I KF
Sbjct: 344 EYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403
Query: 284 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESG 343
+D V++RANDT+YGLASG+ T +I+ A + + AG+V++N Y APFGGFK+SG
Sbjct: 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSG 463
Query: 344 IGRELGKAALDEYTELKTVT 363
G++LG+ AL+EY + KTVT
Sbjct: 464 FGKDLGEEALNEYLKTKTVT 483
>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase
1 and 2, ALDH family 10A8 and 10A9-like. Present in
this CD are the Arabidopsis betaine aldehyde
dehydrogenase (BADH) 1 (chloroplast) and 2
(mitochondria), also known as, aldehyde dehydrogenase
family 10 member A8 and aldehyde dehydrogenase family 10
member A9, respectively, and are putative dehydration-
and salt-inducible BADHs (EC 1.2.1.8) that catalyze the
oxidation of betaine aldehyde to the compatible solute
glycine betaine.
Length = 456
Score = 229 bits (586), Expect = 1e-68
Identities = 109/247 (44%), Positives = 151/247 (61%), Gaps = 20/247 (8%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYY----CF-----VC-AGSRT 420
T +M AAA ++K VSLELGGKSP+++ DAD++ A + CF +C A SR
Sbjct: 211 TGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRL 269
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
V E I D F+++ A A +VGDP ++ V+ GP V + KVL++I G E+G +L
Sbjct: 270 LVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLL 329
Query: 481 AGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
GG+R +KGYFI PTVF++V D +I REEIFGPV + F T DE I AND++YG
Sbjct: 330 CGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYG 389
Query: 539 LASGIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYT 591
LA+ +++ + + + A A IN PQAP+GG+K SGIGRELG+ LD Y
Sbjct: 390 LAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYL 449
Query: 592 ELKTVTE 598
E+K +T
Sbjct: 450 EVKQITR 456
Score = 171 bits (436), Expect = 3e-47
Identities = 77/170 (45%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Query: 198 TTNIDTANTFAHAINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEP 254
I + + G V + KVL++I G E+G +L GG+R +KGYFI P
Sbjct: 287 AEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAP 346
Query: 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 314
TVF++V D +I REEIFGPV + F T DE I AND++YGLA+ +++ + + + A
Sbjct: 347 TVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVA 406
Query: 315 HAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
A+ AG VWINC Q PQAP+GG+K SGIGRELG+ LD Y E+K +T
Sbjct: 407 EALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
Score = 156 bits (396), Expect = 1e-41
Identities = 92/279 (32%), Positives = 132/279 (47%), Gaps = 63/279 (22%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP-MSAPYW 59
M AWK PALAAGC V+LKP+E T LT L +A + +AG P GV++V+ G G AP
Sbjct: 136 MAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLA 195
Query: 60 RKSCLSPLAYRSRTYVQEDIY------------------------DTFVKKAVEKAAA-- 93
+ +++ T + D ++KAVE A
Sbjct: 196 AHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGC 255
Query: 94 -----------------RKVGDPF-----------------DKSVQQGPQVDAVMFTKVL 119
+ D F ++ V+ GP V + KVL
Sbjct: 256 FWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVL 315
Query: 120 NYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177
++I G E+G +L GG+R +KGYFI PTVF++V D +I REEIFGPV + F T
Sbjct: 316 SFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT 375
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
DE I AND++YGLA+ +++ + + + A A+ AG V
Sbjct: 376 EDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIV 414
>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde
dehydrogenase AldA-like. Lactaldehyde dehydrogenase
from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an
NAD(+)-dependent enzyme involved in the metabolism of
L-fucose and L-rhamnose, and other similar sequences are
present in this CD.
Length = 468
Score = 228 bits (583), Expect = 5e-68
Identities = 115/274 (41%), Positives = 155/274 (56%), Gaps = 23/274 (8%)
Query: 342 SGIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
+G G +G A + ++T S + IM AAA N+ +VSLELGGK+P ++
Sbjct: 197 TGRGSVVGDALVAHPKVGMISLTGS---TEAGQKIMEAAAE-NITKVSLELGGKAPAIVM 252
Query: 401 ADADVDMAYYYCF---------VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
DAD+D+A VC R YV EDIYD F++K VEK A KVGDPFD +
Sbjct: 253 KDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA 312
Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAR 509
GP V+ KV ++ VE G L GGKR +G+KGYF EPTV +NV D +I +
Sbjct: 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQ 372
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQAP 569
EEIFGPV ++KF +LDE IE AND++YGL S I T N++TA + + G + +
Sbjct: 373 EEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINREN 432
Query: 570 F-------GGFKESGIGRELGKAALDEYTELKTV 596
F G+K+SG+G GK L+EY + K V
Sbjct: 433 FEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
Score = 163 bits (415), Expect = 4e-44
Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV EDIYD F++K VEK A KVGDPFD + GP V+ KV ++ VE G
Sbjct: 281 RVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGAT 340
Query: 132 LEAGGKR-KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
L GGKR +G+KGYF EPTV +NV D +I +EEIFGPV ++KF +LDE IE AND++Y
Sbjct: 341 LLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL S I T N++TA + + G
Sbjct: 401 GLTSYIYTENLNTAMRATNELEFGET 426
Score = 144 bits (366), Expect = 2e-37
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KGDKGYFIEPTVFSNVTDDFKIARE 269
+N ++D KV ++ VE G L GGKR +G+KGYF EPTV +NV D +I +E
Sbjct: 319 VNEAALD-----KVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQE 373
Query: 270 EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA 329
EIFGPV ++KF +LDE IE AND++YGL S I T N++TA + + G +IN
Sbjct: 374 EIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENF 433
Query: 330 VVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
Q G+K+SG+G GK L+EY + K V
Sbjct: 434 EAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
Score = 61.9 bits (151), Expect = 4e-10
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
++A K PAL G +++KP+E+TPL AL A L +AG P GV++++ G G
Sbjct: 149 LIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGS 201
>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent
acetaldehyde dehydrogenase II and Staphylococcus aureus
AldA1 (SACOL0154)-like. Included in this CD is the
NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII,
AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus
H16 involved in the catabolism of acetoin and ethanol,
and similar proteins, such as, the dimeric
dihydrolipoamide dehydrogenase of the acetoin
dehydrogenase enzyme system of Klebsiella pneumonia.
Also included are sequences similar to the
NAD+-dependent chloroacetaldehyde dehydrogenases (AldA
and AldB) of Xanthobacter autotrophicus GJ10 which are
involved in the degradation of 1,2-dichloroethane, as
well as, the uncharacterized aldehyde dehydrogenase from
Staphylococcus aureus (AldA1, locus SACOL0154) and other
similar sequences.
Length = 480
Score = 227 bits (580), Expect = 2e-67
Identities = 101/244 (41%), Positives = 130/244 (53%), Gaps = 26/244 (10%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADA-----DVDMAYYYCFV----------CAGSRTY 421
AA NL V+LELGGKSP + DA D D + SR
Sbjct: 231 MQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRAL 290
Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
VQE IYD F+++AVE+ A KVG+P D G QV + K+L+Y+ G E+G ++
Sbjct: 291 VQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLT 350
Query: 482 GGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
GG+R DKGYF EPT+ +D +I +EEIFGPV +I FK +E I ANDT+Y
Sbjct: 351 GGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEY 410
Query: 538 GLASGIVTTNIDTANTFAHAINAGSA------VVPQ-APFGGFKESGIGRELGKAALDEY 590
GL G+ T +I+ A A I G P APFGG+K+SGIGRE K LD Y
Sbjct: 411 GLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHY 470
Query: 591 TELK 594
+ K
Sbjct: 471 QQTK 474
Score = 216 bits (553), Expect = 1e-63
Identities = 130/381 (34%), Positives = 170/381 (44%), Gaps = 79/381 (20%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
M AWK PALAAG V+LKPA QTPL+ L + L P GV++V+ G+G +
Sbjct: 152 MAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAG---- 206
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
PLA R + K A F S G + M N
Sbjct: 207 ----KPLASHPR---------------IAKLA-------FTGSTTVGRLI---MQYAAEN 237
Query: 121 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF----SNVTDDFKIAREEIF-------GPV 169
I +E GGK P +F + DDF EE G V
Sbjct: 238 LIPVTLELGGK---------------SPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEV 282
Query: 170 QT-----IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS-VDAEMFTK 223
T +++ DE IERA + I N G+ V + K
Sbjct: 283 CTCPSRALVQESIYDEFIERAVER---------FEAIKVGNPLDPETMMGAQVSKDQLEK 333
Query: 224 VLNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 279
+L+Y+ G E+G ++ GG+R DKGYF EPT+ +D +I +EEIFGPV +I
Sbjct: 334 ILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVI 393
Query: 280 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGF 339
FK +E I ANDT+YGL G+ T +I+ A A I G VW+NCY APFGG+
Sbjct: 394 TFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGY 453
Query: 340 KESGIGRELGKAALDEYTELK 360
K+SGIGRE K LD Y + K
Sbjct: 454 KKSGIGRETHKMMLDHYQQTK 474
>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin
dehydrogenase-like. Vanillin dehydrogenase (Vdh,
VaniDH) involved in the metabolism of ferulic acid and
other related sequences are included in this CD. The
E. coli vanillin dehydrogenase (LigV) preferred NAD+ to
NADP+ and exhibited a broad substrate preference,
including vanillin, benzaldehyde, protocatechualdehyde,
m-anisaldehyde, and p-hydroxybenzaldehyde.
Length = 451
Score = 225 bits (575), Expect = 4e-67
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 21/240 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCF-----VC-AGSRTYVQED 425
+A A +LK+++LELGGK+PL++ ADAD+D A + F +C + SR V+E
Sbjct: 214 IAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEP 273
Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
+YD FVKK V +A+ KVGDP D GP + ++ ++ V +G KL GGK
Sbjct: 274 VYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY 333
Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
G+ F +PTV ++VT D +I REE FGPV ++I K +E +E ANDT+YGL++ I+T
Sbjct: 334 DGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILT 390
Query: 546 TNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
++ A A + +G + PFGG K SG GRE G+ +++E+TELK +T
Sbjct: 391 NDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450
Score = 145 bits (369), Expect = 5e-38
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V+E +YD FVKK V +A+ KVGDP D GP + ++ ++ V +G
Sbjct: 266 SRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGA 325
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
KL GGK G+ F +PTV ++VT D +I REE FGPV ++I K +E +E ANDT+Y
Sbjct: 326 KLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEY 382
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL++ I+T ++ A A + +G V
Sbjct: 383 GLSAAILTNDLQRAFKLAERLESGMV 408
Score = 143 bits (363), Expect = 3e-37
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
++ V +G KL GGK G+ F +PTV ++VT D +I REE FGPV ++I K +E
Sbjct: 317 VEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEA 373
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFKESGIGR 346
+E ANDT+YGL++ I+T ++ A A + +G V IN + PFGG K SG GR
Sbjct: 374 LELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGR 433
Query: 347 ELGKAALDEYTELKTVT 363
E G+ +++E+TELK +T
Sbjct: 434 EGGEWSMEEFTELKWIT 450
Score = 53.9 bits (130), Expect = 1e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 LAWK-WGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
LA K ALAAG V+LKP+E+TP+ L +A + ++AG P GV +V+ G G
Sbjct: 135 LATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGG 186
>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus
AldA1 (SACOL0154) aldehyde dehydrogenase-like.
Uncharacterized aldehyde dehydrogenase from
Staphylococcus aureus (AldA1, locus SACOL0154) and other
similar sequences are present in this CD.
Length = 475
Score = 224 bits (573), Expect = 1e-66
Identities = 114/244 (46%), Positives = 148/244 (60%), Gaps = 25/244 (10%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAY------------YYCFVCAGSRTYVQ 423
+A AAA L +LELGGKS +I DA+ D A C CAGSR +VQ
Sbjct: 230 VAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVC--CAGSRIFVQ 287
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
E IYD FV K EK KVG+P D Q G QV+ + K+L+Y+ E+G K+ GG
Sbjct: 288 EGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG 347
Query: 484 KR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
R DKG+FIEPT+ NVT+D ++A+EEIFGPV T+IKFKT DEVI+ AND++YGL
Sbjct: 348 HRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGL 407
Query: 540 ASGIVTTNIDTANTFAHAINAGSA------VVPQ-APFGGFKESGIGRELGKAALDEYTE 592
G+ T +I+ A A A+ G +P APFGG+K+SGIGRE K+ LD YT+
Sbjct: 408 GGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQ 467
Query: 593 LKTV 596
+K +
Sbjct: 468 MKNI 471
Score = 199 bits (508), Expect = 3e-57
Identities = 130/375 (34%), Positives = 188/375 (50%), Gaps = 68/375 (18%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
M AWK PALAAG V++KP+ T L+ L +A + Q P GV++++ G G S Y
Sbjct: 152 MAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLL 210
Query: 61 K-SCLSPLAYRSRTYVQEDIYDTFVKKAVE-------KAAARKVGD-PFDKSVQQGPQVD 111
L LA+ T V D+ KK + K+A D +DK+++ G Q+
Sbjct: 211 NHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALE-GAQL- 268
Query: 112 AVMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQT 171
++F QG AG + IF VQ
Sbjct: 269 GILFN-----------QGQVCCAGSR---------------------------IF--VQE 288
Query: 172 IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSG 231
I + + ++ E+ + K G +D +N +D K+L+Y+
Sbjct: 289 GIYDEFVAKLKEKFENVKVGNP-------LDPDTQMGAQVNKDQLD-----KILSYVDIA 336
Query: 232 VEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
E+G K+ GG R DKG+FIEPT+ NVT+D ++A+EEIFGPV T+IKFKT DEV
Sbjct: 337 KEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEV 396
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
I+ AND++YGL G+ T +I+ A A A+ G VW+N Y + APFGG+K+SGIGRE
Sbjct: 397 IDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRE 456
Query: 348 LGKAALDEYTELKTV 362
K+ LD YT++K +
Sbjct: 457 THKSMLDAYTQMKNI 471
>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde
dehydrogenase AldA-like. The Mycobacterium
tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB
structure, 3B4W, and the Mycobacterium tuberculosis
H37Rv aldehyde dehydrogenase AldA (locus Rv0768)
sequence, as well as the Rhodococcus rhodochrous ALDH
involved in haloalkane catabolism, and other similar
sequences, are included in this CD.
Length = 471
Score = 224 bits (573), Expect = 1e-66
Identities = 96/239 (40%), Positives = 130/239 (54%), Gaps = 18/239 (7%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVD---------MAYYYCFVC-AGSRTYVQEDI 426
AA L RV+LELGGKS ++ DAD+D VC A +R V
Sbjct: 232 AAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSR 291
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR- 485
YD V+ AA KVGDP D + Q GP A +V YI G +G +L GG R
Sbjct: 292 YDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRP 351
Query: 486 KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
G D+G+F+EPT+F++V +D +IA+EEIFGPV ++I + D+ + AND+ YGL+ +
Sbjct: 352 AGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVW 411
Query: 545 TTNIDTANTFAHAINAGSAVV------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
T +++ A I G+ V APFGGFK+SGIGRE G LD Y E K++
Sbjct: 412 TADVERGLAVARRIRTGTVGVNGFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
Score = 164 bits (418), Expect = 1e-44
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR-KG-DKGYFIEPTVFSNVTDDFKIAREEIFG 273
A +V YI G +G +L GG R G D+G+F+EPT+F++V +D +IA+EEIFG
Sbjct: 322 ASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFG 381
Query: 274 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333
PV ++I + D+ + AND+ YGL+ + T +++ A I G+V +N + +
Sbjct: 382 PVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGF-RLDFG 440
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVT 363
APFGGFK+SGIGRE G LD Y E K++
Sbjct: 441 APFGGFKQSGIGREGGPEGLDAYLETKSIY 470
Score = 143 bits (362), Expect = 6e-37
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 67 LAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGV 126
L RSR YD V+ AA KVGDP D + Q GP A +V YI G
Sbjct: 286 LVPRSR-------YDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGR 338
Query: 127 EQGGKLEAGGKR-KG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIER 184
+G +L GG R G D+G+F+EPT+F++V +D +IA+EEIFGPV ++I + D+ +
Sbjct: 339 AEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398
Query: 185 ANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFT 222
AND+ YGL+ + T +++ A I G+V F
Sbjct: 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR 436
Score = 71.5 bits (176), Expect = 4e-13
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
+ A K PALAAGC V+LKP+ +TPL A +A ++AG P GV++V+P
Sbjct: 153 LAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA 202
>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative
aldehyde dehydrogenase AldA (AAD23400)-like. Putative
aldehyde dehydrogenase, AldA, from Streptomyces
aureofaciens (locus AAD23400) and other similar
sequences are present in this CD.
Length = 446
Score = 223 bits (571), Expect = 1e-66
Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 18/243 (7%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGS------RT 420
T +MA+AA LKRV+LELGG ++ D D+D ++ F+ +G R
Sbjct: 203 TGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRL 261
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
YV E IYD F + V A A VGD D GP + + KV ++ +G K+
Sbjct: 262 YVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVL 321
Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
AGG+ GYFI PT+ + + +I EE FGPV ++K+ DEVI RAND++YGL
Sbjct: 322 AGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLG 381
Query: 541 SGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALDEYTEL 593
+ + +++++ A A + AG+ A+ P APFGG K+SGIG E G L EYT+
Sbjct: 382 ASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQT 441
Query: 594 KTV 596
+ +
Sbjct: 442 QVI 444
Score = 169 bits (431), Expect = 1e-46
Identities = 58/142 (40%), Positives = 88/142 (61%)
Query: 221 FTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
+ KV ++ +G K+ AGG+ GYFI PT+ + + +I EE FGPV ++K
Sbjct: 303 YDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLK 362
Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
+ DEVI RAND++YGL + + +++++ A A + AG+VWIN + A+ P APFGG K
Sbjct: 363 YSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHK 422
Query: 341 ESGIGRELGKAALDEYTELKTV 362
+SGIG E G L EYT+ + +
Sbjct: 423 QSGIGVEFGIEGLKEYTQTQVI 444
Score = 144 bits (365), Expect = 2e-37
Identities = 54/145 (37%), Positives = 81/145 (55%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV E IYD F + V A A VGD D GP + + + KV ++ +G K
Sbjct: 260 RLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAK 319
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ AGG+ GYFI PT+ + + +I EE FGPV ++K+ DEVI RAND++YG
Sbjct: 320 VLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYG 379
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L + + +++++ A A + AG+V
Sbjct: 380 LGASVWSSDLERAEAVARRLEAGTV 404
Score = 54.8 bits (133), Expect = 7e-08
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 1 MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
+LA WK PAL AG V+LKP+ TPL L + L Q+ P GV++V+ G
Sbjct: 129 LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG 178
>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid
dehydrogenase-like and related proteins. The
6-oxolauric acid dehydrogenase (CddD) from Rhodococcus
ruber SC1 which converts 6-oxolauric acid to
dodecanedioic acid; and the aldehyde dehydrogenase
(locus SSP0762) from Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305 and also, the Mycobacterium
tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence;
and other similar sequences, are included in this CD.
Length = 459
Score = 223 bits (570), Expect = 3e-66
Identities = 98/241 (40%), Positives = 134/241 (55%), Gaps = 20/241 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFVCAG------SRTYVQE 424
IMA AAA LKRV LELGGKS ++ DAD+ A C AG +R V
Sbjct: 218 IMAQAAA-TLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPR 276
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
YD V+ A VGDP D GP + A +V YI G ++G +L GG
Sbjct: 277 SRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGG 336
Query: 485 R--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
R DKG+++EPT+F++V +D +IA+EEIFGPV +I + DE + AND+ YGL+ G
Sbjct: 337 RPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGG 396
Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKT 595
+ + ++D A A I GS + P APFGG+K+SG+GRE G L+E+ E K+
Sbjct: 397 VWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKS 456
Query: 596 V 596
+
Sbjct: 457 I 457
Score = 164 bits (418), Expect = 1e-44
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 10/186 (5%)
Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKL 238
DEV+E + V D I+A D +V YI G ++G +L
Sbjct: 280 DEVVEALAAA---FEALPVGDPADPGTVMGPLISAAQRD-----RVEGYIARGRDEGARL 331
Query: 239 EAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
GG R DKG+++EPT+F++V +D +IA+EEIFGPV +I + DE + AND+ Y
Sbjct: 332 VTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDY 391
Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
GL+ G+ + ++D A A I GSV IN P APFGG+K+SG+GRE G L+E+
Sbjct: 392 GLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEF 451
Query: 357 TELKTV 362
E K++
Sbjct: 452 LETKSI 457
Score = 148 bits (377), Expect = 6e-39
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
+R V YD V+ A VGDP D GP + A +V YI G ++G
Sbjct: 270 TRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGA 329
Query: 131 KLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
+L GG R DKG+++EPT+F++V +D +IA+EEIFGPV +I + DE + AND+
Sbjct: 330 RLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDS 389
Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
YGL+ G+ + ++D A A I GSV
Sbjct: 390 DYGLSGGVWSADVDRAYRVARRIRTGSV 417
Score = 68.4 bits (168), Expect = 4e-12
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
K PALAAG V+LKPA TPL+AL + + + P GV++V+ G
Sbjct: 141 LAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDN 191
>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde
dehydrogenase, PhdK-like. Nocardioides sp. strain
KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme
involved in phenanthrene degradation, and other similar
sequences, are present in this CD.
Length = 456
Score = 218 bits (556), Expect = 3e-64
Identities = 106/280 (37%), Positives = 154/280 (55%), Gaps = 29/280 (10%)
Query: 342 SGIGRELGKAALDEYTELK--TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
G G G AAL + ++K + S T +IM AAA +K V+LELGGK+ L++
Sbjct: 179 PGDGATAG-AALVRHPDVKRIALIGSV---PTGRAIMRAAAEG-IKHVTLELGGKNALIV 233
Query: 400 CADADVD---------MAYYYCFVCAGS--RTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
DAD + M + +C GS R +V E IYD + + VE+ AA KVGDP D
Sbjct: 234 FPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTD 293
Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDD 504
+ GP V + + +V++YI S +G +L GG R + G+++EPTVF++VT
Sbjct: 294 PATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPG 353
Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV 564
+IAREEIFGPV ++++++ E++ +AN +YGL + I T +I A+ A + AG
Sbjct: 354 MRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW 413
Query: 565 VPQ-------APFGGFKESGIGRELGKAALDEYTELKTVT 597
+ APFGG K SGIGRE L YT+ K V
Sbjct: 414 INGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVN 453
Score = 154 bits (390), Expect = 7e-41
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 8/160 (5%)
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
+SC S SR +V E IYD + + VE+ AA KVGDP D + GP V + +V++
Sbjct: 257 QSCGS----TSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMH 312
Query: 121 YIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
YI S +G +L GG R + G+++EPTVF++VT +IAREEIFGPV ++++++
Sbjct: 313 YIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWR 372
Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
E++ +AN +YGL + I T +I A+ A + AG V
Sbjct: 373 DEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYV 412
Score = 153 bits (389), Expect = 1e-40
Identities = 62/152 (40%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEI 271
V + + +V++YI S +G +L GG R + G+++EPTVF++VT +IAREEI
Sbjct: 302 VSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEI 361
Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV 331
FGPV ++++++ E++ +AN +YGL + I T +I A+ A + AG VWIN
Sbjct: 362 FGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHF 421
Query: 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
APFGG K SGIGRE L YT+ K V
Sbjct: 422 LGAPFGGVKNSGIGREECLEELLSYTQEKNVN 453
Score = 48.9 bits (117), Expect = 6e-06
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
A K LAAG V++KP EQ PL+AL +A L ++ P GV ++LPG G
Sbjct: 134 AAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGA 183
>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent
gamma-aminobutyraldehyde dehydrogenase YdcW-like.
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde
dehydrogenase (ABALDH), YdcW of Escherichia coli K12,
catalyzes the oxidation of gamma-aminobutyraldehyde to
gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl
medium-chain aldehydes, but with a lower catalytic
efficiency.
Length = 450
Score = 216 bits (553), Expect = 6e-64
Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 19/244 (7%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAY----YYCFVCAG------SRT 420
T + AAA LKRV LELGGK+P+++ DAD+D A + AG R
Sbjct: 208 TGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRV 266
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
YV E +YD FV VE +A +VGDP D+ + GP A +V ++ ++
Sbjct: 267 YVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVL 325
Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
GG+R GYF EPTV + V D +I +EEIFGPV T+ F DE IE AND +YGLA
Sbjct: 326 TGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLA 385
Query: 541 SGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTEL 593
S + T ++ A + ++ G+ + + P GGFK+SG G++L AL++YT +
Sbjct: 386 SSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRI 445
Query: 594 KTVT 597
K V
Sbjct: 446 KHVM 449
Score = 158 bits (401), Expect = 2e-42
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
A +V ++ ++ GG+R GYF EPTV + V D +I +EEIFGPV
Sbjct: 303 NSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPV 361
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
T+ F DE IE AND +YGLAS + T ++ A + ++ G+VW+N + + + P
Sbjct: 362 VTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMP 421
Query: 336 FGGFKESGIGRELGKAALDEYTELKTVT 363
GGFK+SG G++L AL++YT +K V
Sbjct: 422 HGGFKQSGYGKDLSIYALEDYTRIKHVM 449
Score = 147 bits (374), Expect = 9e-39
Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
R YV E +YD FV VE +A +VGDP D+ + GP A +V ++
Sbjct: 264 CRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHA 322
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
++ GG+R GYF EPTV + V D +I +EEIFGPV T+ F DE IE AND +Y
Sbjct: 323 RVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEY 382
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLAS + T ++ A + ++ G+V
Sbjct: 383 GLASSVWTRDVGRAMRLSARLDFGTV 408
Score = 73.9 bits (182), Expect = 7e-14
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK PALAAG V+LKP+E TPLT L +A L + P GV++V+ G G
Sbjct: 134 MAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGA 185
>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis
succinate-semialdehyde dehydrogenase 1-like.
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1,
EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation
of succinate semialdehyde (SSA) to succinate. SSADH
activity in Mycobacterium tuberculosis (Mtb) is encoded
by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb
GabD1 SSADH1 reportedly is an enzyme of the
gamma-aminobutyrate shunt, which forms a functional link
between two TCA half-cycles by converting
alpha-ketoglutarate to succinate.
Length = 429
Score = 215 bits (551), Expect = 8e-64
Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 17/240 (7%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQ 423
+AA A NLK+ LELGG P ++ DAD+D A C A R V
Sbjct: 188 RAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVH 247
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
ED+YD F++K VE AA KVGDP D+ GP ++ ++ ++ V G L GG
Sbjct: 248 EDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGG 307
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
KR G F PTV ++VT EE+FGPV +IK K +E I AND+ +GL +
Sbjct: 308 KRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSV 367
Query: 544 VTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
TT+++ A A + AG + P+ PFGG K SG GRELG+ + E+ +KTV
Sbjct: 368 FTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTV 427
Score = 149 bits (378), Expect = 2e-39
Identities = 56/135 (41%), Positives = 76/135 (56%)
Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
++ V G L GGKR G F PTV ++VT EE+FGPV +IK K +E
Sbjct: 293 VEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEA 352
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
I AND+ +GL + TT+++ A A + AG V+IN P+ PFGG K SG GRE
Sbjct: 353 IALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRE 412
Query: 348 LGKAALDEYTELKTV 362
LG+ + E+ +KTV
Sbjct: 413 LGRFGIREFVNIKTV 427
Score = 143 bits (363), Expect = 3e-37
Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 62 SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
SC++ R V ED+YD F++K VE AA KVGDP D+ GP + ++
Sbjct: 237 SCIAA----KRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQ 292
Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
++ V G L GGKR G F PTV ++VT EE+FGPV +IK K +E
Sbjct: 293 VEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEA 352
Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
I AND+ +GL + TT+++ A A + AG V
Sbjct: 353 IALANDSPFGLGGSVFTTDLERAERVARRLEAGMV 387
Score = 50.2 bits (121), Expect = 2e-06
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 7 GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP 49
P L AG VLLK A P AL + L ++AGFP+GV L
Sbjct: 118 APNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLL 160
>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde
dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde
dehydrogenase of Magnetospirillum gryphiswaldense MSR-1
(MGR_2402) , and other similar sequences, are present in
this CD.
Length = 457
Score = 214 bits (548), Expect = 4e-63
Identities = 112/282 (39%), Positives = 158/282 (56%), Gaps = 31/282 (10%)
Query: 342 SGIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
+G G E G AAL ++ ++ VT + S I+ AAA L VSLELGGKSP+++
Sbjct: 180 TGYGEECG-AALVDHPDVDKVTFTG--STEVGKIIYRAAADRLIPVSLELGGKSPMIVFP 236
Query: 402 DADVDMAY-------------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFD 448
DAD+D A C AGSR +V EDIYD F++K V K + K+GDP D
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSC--TAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLD 294
Query: 449 KSVQQGPQVDAEMFTKVLNYIKSGVE-QGGKLEAGGKRKGD----KGYFIEPTVFSNVTD 503
++ G + + F KV YI G+ G + GG G+ G+F++PT+FS V +
Sbjct: 295 EATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDN 354
Query: 504 DFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAI----- 558
++++AREEIFGPV I +K DEVI AND+ YGLA+ + T ++ A AHA+
Sbjct: 355 EWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWV 414
Query: 559 --NAGSAVVPQAPFGGFKESGIGRELG-KAALDEYTELKTVT 597
N G P +GGFK+SG+GRE + L+ +T+ KTV
Sbjct: 415 QVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456
Score = 150 bits (380), Expect = 2e-39
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QG 129
SR +V EDIYD F++K V K + K+GDP D++ G + F KV YI G+ G
Sbjct: 264 SRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSG 323
Query: 130 GKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
+ GG G+ G+F++PT+FS V +++++AREEIFGPV I +K DEVI A
Sbjct: 324 ATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMA 383
Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
ND+ YGLA+ + T ++ A AHA+ AG V
Sbjct: 384 NDSHYGLAAYVWTRDLGRALRAAHALEAGWV 414
Score = 146 bits (370), Expect = 4e-38
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 221 FTKVLNYIKSGVE-QGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPV 275
F KV YI G+ G + GG G+ G+F++PT+FS V +++++AREEIFGPV
Sbjct: 308 FAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPV 367
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
I +K DEVI AND+ YGLA+ + T ++ A AHA+ AG V +N P
Sbjct: 368 LCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQS 427
Query: 336 FGGFKESGIGRELG-KAALDEYTELKTVT 363
+GGFK+SG+GRE + L+ +T+ KTV
Sbjct: 428 YGGFKQSGLGREASLEGMLEHFTQKKTVN 456
Score = 58.1 bits (141), Expect = 7e-09
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+ A K PAL AG V+LK AE PL L +A + Q P GV++V+ GYG
Sbjct: 133 LAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGE 184
>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa
aldehyde dehydrogenase (AAS00426)-like. Uncharacterized
aldehyde dehydrogenase of Saccharopolyspora spinosa
(AAS00426) and other similar sequences, are present in
this CD.
Length = 454
Score = 211 bits (539), Expect = 8e-62
Identities = 101/278 (36%), Positives = 143/278 (51%), Gaps = 29/278 (10%)
Query: 343 GIGRELGKAALDEYTELK--TVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
G+G E G AAL + + + T S T ++M AAA N+ V+LELGGKSP ++
Sbjct: 182 GLGAEAG-AALVAHPGVDHISFTGSV---ETGIAVMRAAA-ENVVPVTLELGGKSPQIVF 236
Query: 401 ADADVDMA--------YYYCF-VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKS 450
ADAD++ A C AGSR V IYD +++ VE+ A +VG +
Sbjct: 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-D 295
Query: 451 VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKI 507
GP + A+ +V ++ +G ++ AGG+ GYF+ PT+ +V D ++
Sbjct: 296 PDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRL 355
Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVP- 566
A+EEIFGPV ++ F E I AN T YGL +G+ T + D A A + AG V
Sbjct: 356 AQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNN 415
Query: 567 -------QAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+ PFGG K+SG GRE G AL YT+ KTV
Sbjct: 416 YGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
Score = 158 bits (401), Expect = 2e-42
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIF 272
+ A+ +V ++ +G ++ AGG+ GYF+ PT+ +V D ++A+EEIF
Sbjct: 302 ISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIF 361
Query: 273 GPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP 332
GPV ++ F E I AN T YGL +G+ T + D A A + AG V++N Y A
Sbjct: 362 GPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGG 421
Query: 333 -QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
+ PFGG K+SG GRE G AL YT+ KTV
Sbjct: 422 IELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
Score = 135 bits (342), Expect = 2e-34
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V IYD +++ VE+ A +VG + GP + A +V ++ +G
Sbjct: 264 SRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGA 322
Query: 131 KLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
++ AGG+ GYF+ PT+ +V D ++A+EEIFGPV ++ F E I AN
Sbjct: 323 RIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANG 382
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
T YGL +G+ T + D A A + AG V
Sbjct: 383 TDYGLVAGVWTRDGDRALRVARRLRAGQV 411
Score = 69.6 bits (171), Expect = 1e-12
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+ PALAAG V++KPAE PLTAL +A L ++AG P G ++V+ G G
Sbjct: 133 ITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGA 185
>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to
Tortula ruralis aldehyde dehydrogenase ALDH21A1.
Uncharacterized aldehyde dehydrogenase (ORF name y4uC)
with sequence similarity to the moss Tortula ruralis
aldehyde dehydrogenase ALDH21A1 (RNP123) believed to
play an important role in the detoxification of
aldehydes generated in response to desiccation- and
salinity-stress, and similar sequences are included in
this CD.
Length = 453
Score = 207 bits (530), Expect = 1e-60
Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 21/237 (8%)
Query: 379 AAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGS------RTYVQEDIYD 428
A + LK+V+LELG + +++ ADAD++ A C F AG R +V EDIYD
Sbjct: 219 ARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYD 278
Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
F+++ V VGDP D+ GP + ++ +++ VE G +L GGKR G
Sbjct: 279 EFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA 338
Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
+EPTV ++V D K+ EE+F PV ++ F TLDE I AND+ YGL +G+ T ++
Sbjct: 339 ---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL 395
Query: 549 DTANTFAHAINAGSAV--------VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
A A + G + V P+GG KESG GRE + A++E TE+K V
Sbjct: 396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452
Score = 143 bits (362), Expect = 5e-37
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
++ +++ VE G +L GGKR G +EPTV ++V D K+ EE+F PV ++ F
Sbjct: 313 ERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPF 369
Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-CYQAVVPQAPFGGFK 340
TLDE I AND+ YGL +G+ T ++ A A + G V IN V P+GG K
Sbjct: 370 DTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVK 429
Query: 341 ESGIGRELGKAALDEYTELKTVT 363
ESG GRE + A++E TE+K V
Sbjct: 430 ESGTGREGPRYAIEEMTEIKLVC 452
Score = 142 bits (360), Expect = 8e-37
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R +V EDIYD F+++ V VGDP D+ GP + ++ +++ VE G +
Sbjct: 269 RIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGAR 328
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
L GGKR G +EPTV ++V D K+ EE+F PV ++ F TLDE I AND+ YG
Sbjct: 329 LLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYG 385
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L +G+ T ++ A A + G V
Sbjct: 386 LQAGVFTNDLQKALKAARELEVGGV 410
Score = 77.3 bits (191), Expect = 6e-15
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 2 LAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
+A K GPA+AAG V+LKPA QTPL+AL +A L +AG P G ++V+ G G
Sbjct: 140 VAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSG 190
>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic
semialdehyde dehydrogenase and related proteins. ALDH
subfamily which includes the NAD+-dependent,
alpha-aminoadipic semialdehyde dehydrogenase (AASADH,
EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1,
ALDH7B or delta-1-piperideine-6-carboxylate
dehydrogenase (P6CDH), and other similar sequences, such
as the uncharacterized aldehyde dehydrogenase of
Candidatus kuenenia AldH (locus CAJ73105).
Length = 478
Score = 208 bits (532), Expect = 2e-60
Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 24/247 (9%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY-YCFVCAG---------SRTYVQ 423
+ A RV LELGG + +++ DAD+D+A F G R V
Sbjct: 229 RRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVH 288
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
E +YD F+++ V+ ++GDP D+ GP ++ K LN I+ QGG + GG
Sbjct: 289 ESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGG 348
Query: 484 KR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
KR G+ G ++EPT+ + VTDD +I +EE F P+ +IKF +L+E I ND GL+S
Sbjct: 349 KRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSS 408
Query: 542 GIVTTNIDTANTFAHA---------INAGS--AVVPQAPFGGFKESGIGRELGKAALDEY 590
I T ++ A + +N + A + FGG KE+G GRE G A +Y
Sbjct: 409 SIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEI-GGAFGGEKETGGGRESGSDAWKQY 467
Query: 591 TELKTVT 597
T T
Sbjct: 468 MRRSTCT 474
Score = 173 bits (442), Expect = 8e-48
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 66/271 (24%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGY------- 51
W AL G V+ KP+E TPLTA+ V + + G P GV++++ G
Sbjct: 151 GWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELL 210
Query: 52 ---------------------GPMSAPYWRKSCLS---------------PLAYR----- 70
G A + + L LA R
Sbjct: 211 VHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFA 270
Query: 71 ------------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKV 118
R V E +YD F+++ V+ ++GDP D+ GP ++ K
Sbjct: 271 AVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKY 330
Query: 119 LNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 176
LN I+ QGG + GGKR G+ G ++EPT+ + VTDD +I +EE F P+ +IKF
Sbjct: 331 LNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390
Query: 177 TLDEVIERANDTKYGLASGIVTTNIDTANTF 207
+L+E I ND GL+S I T ++ A +
Sbjct: 391 SLEEAIAINNDVPQGLSSSIFTEDLREAFRW 421
Score = 143 bits (363), Expect = 5e-37
Identities = 57/151 (37%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
K LN I+ QGG + GGKR G+ G ++EPT+ + VTDD +I +EE F P+ +IK
Sbjct: 329 KYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIK 388
Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTF--AHAINAGSVWINCYQAVVP------ 332
F +L+E I ND GL+S I T ++ A + + G V +N +P
Sbjct: 389 FDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVN-----IPTSGAEI 443
Query: 333 QAPFGGFKESGIGRELGKAALDEYTELKTVT 363
FGG KE+G GRE G A +Y T T
Sbjct: 444 GGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474
>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase.
Length = 503
Score = 206 bits (527), Expect = 1e-59
Identities = 99/249 (39%), Positives = 141/249 (56%), Gaps = 19/249 (7%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF-----VC-AGS 418
S + + AAA +K VSLELGGKSP+++ D D+D A + CF +C A S
Sbjct: 239 STATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATS 298
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
R V E I F++K V+ A K+ DP ++ + GP V + KVL +I + +G
Sbjct: 299 RLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGAT 358
Query: 479 LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
+ GGKR KG+FIEPT+ ++VT +I REE+FGPV + F T DE IE AND+
Sbjct: 359 ILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSH 418
Query: 537 YGLASGIVTTNIDTANTFAHAINAGSAVV----P---QAPFGGFKESGIGRELGKAALDE 589
YGLA +++ +++ + A AG + P QAP+GG K SG GRELG+ L+
Sbjct: 419 YGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLEN 478
Query: 590 YTELKTVTE 598
Y +K VT+
Sbjct: 479 YLSVKQVTK 487
Score = 154 bits (391), Expect = 1e-40
Identities = 67/151 (44%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFG 273
V + KVL +I + +G + GGKR KG+FIEPT+ ++VT +I REE+FG
Sbjct: 337 VSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFG 396
Query: 274 PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ 333
PV + F T DE IE AND+ YGLA +++ +++ + A AG VWINC Q Q
Sbjct: 397 PVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQ 456
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTVTE 364
AP+GG K SG GRELG+ L+ Y +K VT+
Sbjct: 457 APWGGIKRSGFGRELGEWGLENYLSVKQVTK 487
Score = 132 bits (333), Expect = 6e-33
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E I F++K V+ A K+ DP ++ + GP V + KVL +I + +G
Sbjct: 298 SRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGA 357
Query: 131 KLEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
+ GGKR KG+FIEPT+ ++VT +I REE+FGPV + F T DE IE AND+
Sbjct: 358 TILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDS 417
Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
YGLA +++ +++ + A AG V
Sbjct: 418 HYGLAGAVISNDLERCERVSEAFQAGIV 445
Score = 63.2 bits (154), Expect = 2e-10
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M WK PALAAGC +LKP+E +T L +A + ++ G P GV++V+ G G
Sbjct: 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGT 219
>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde
dehydrogenase. This model represents the dehydrogenase
responsible for the conversion of
5-carboxymethyl-2-hydroxymuconate semialdehyde to
5-carboxymethyl-2-hydroxymuconate (a tricarboxylic
acid). This is the step in the degradation of
4-hydroxyphenylacetic acid via homoprotocatechuate
following the oxidative opening of the aromatic ring.
Length = 488
Score = 206 bits (525), Expect = 1e-59
Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 29/279 (10%)
Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
G G E GKA L + ++K V+ + + T IM A + LKR S+ELGGKSP+++ D
Sbjct: 200 GFGEEAGKA-LVAHPDVKAVSFTG-ETATGSIIMRNGADT-LKRFSMELGGKSPVIVFDD 256
Query: 403 ADVDMAY------YYCF----VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQ 452
AD++ A + F A SR VQE I + FV+K VE+ A +VG P D +
Sbjct: 257 ADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316
Query: 453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-------KGYFIEPTVFSNVTDDF 505
GP + E KVL Y+++ ++G + GG+R +G ++ PTVF+ +
Sbjct: 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHM 376
Query: 506 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV 565
+IA+EEIFGPV T+I FK +E IE+ANDT+YGLA + T ++ A+ A A+ AG V
Sbjct: 377 RIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWV 436
Query: 566 --------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
P PFGG K SGIGRE G + D YTE K V
Sbjct: 437 NSQNVRHLPT-PFGGVKASGIGREGGTYSFDFYTETKNV 474
Score = 136 bits (343), Expect = 2e-34
Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-------KGYFIEPTVFSNVTDDFKIAR 268
+ E KVL Y+++ ++G + GG+R +G ++ PTVF+ + +IA+
Sbjct: 321 IHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQ 380
Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ 328
EEIFGPV T+I FK +E IE+ANDT+YGLA + T ++ A+ A A+ AG +W+N
Sbjct: 381 EEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQN 440
Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
PFGG K SGIGRE G + D YTE K V
Sbjct: 441 VRHLPTPFGGVKASGIGREGGTYSFDFYTETKNV 474
Score = 135 bits (342), Expect = 4e-34
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR VQE I + FV+K VE+ A +VG P D + GP + KVL Y+++ ++G
Sbjct: 282 SRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGA 341
Query: 131 KLEAGGKRKGD-------KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIE 183
+ GG+R +G ++ PTVF+ + +IA+EEIFGPV T+I FK +E IE
Sbjct: 342 TILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIE 401
Query: 184 RANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
+ANDT+YGLA + T ++ A+ A A+ AG +
Sbjct: 402 KANDTRYGLAGYVWTNDVGRAHRVALALEAGMI 434
Score = 66.4 bits (162), Expect = 2e-11
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 1 MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
ML+ WK PALA G V+LKPAE +PLTA +A + ++AG PDGV +++ G+G
Sbjct: 150 MLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFG 202
>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii
NAD+-dependent lactaldehyde dehydrogenase-like.
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22)
involved the biosynthesis of coenzyme F(420) in
Methanocaldococcus jannaschii through the oxidation of
lactaldehyde to lactate and generation of NAPH, and
similar sequences are included in this CD.
Length = 456
Score = 203 bits (518), Expect = 7e-59
Identities = 95/239 (39%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----------FVCAGSRTYVQED 425
+A+ A K+V+LELGG P+++ DAD++ A A R V+E+
Sbjct: 218 IASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEE 277
Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
+YD F+K VEK KVGDP D+S GP + E ++ N + VE+GGK+ GGKR
Sbjct: 278 VYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR 337
Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
D+G F PTV N T D + +EE+FGPV I K K +E +E AN T+YGL + + T
Sbjct: 338 --DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFT 395
Query: 546 TNIDTANTFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELKTV 596
+I+ A A + AG V+ + PFGGFK+SGIGRE + + E TE KT+
Sbjct: 396 NDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTI 454
Score = 142 bits (360), Expect = 8e-37
Identities = 62/145 (42%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V+E++YD F+K VEK KVGDP D+S GP + ++ N + VE+GGK
Sbjct: 271 RILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGK 330
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GGKR D+G F PTV N T D + +EE+FGPV I K K +E +E AN T+YG
Sbjct: 331 ILYGGKR--DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYG 388
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L + + T +I+ A A + AG V
Sbjct: 389 LQASVFTNDINRALKVARELEAGGV 413
Score = 138 bits (349), Expect = 3e-35
Identities = 63/148 (42%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+ E ++ N + VE+GGK+ GGKR D+G F PTV N T D + +EE+FGPV
Sbjct: 309 ISPEAVERMENLVNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDMIVMKEEVFGPV 366
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA- 334
I K K +E +E AN T+YGL + + T +I+ A A + AG V IN
Sbjct: 367 LPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNL 426
Query: 335 PFGGFKESGIGRELGKAALDEYTELKTV 362
PFGGFK+SGIGRE + + E TE KT+
Sbjct: 427 PFGGFKKSGIGREGVRYTMLEMTEEKTI 454
Score = 63.1 bits (154), Expect = 2e-10
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 3 AWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
A K PA+A G V++KP+ TPLTA+ +A + ++AG P GVI+V+ GYG
Sbjct: 141 AHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSE 192
>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase. Succinic
semialdehyde dehydrogenase is one of three enzymes
constituting 4-aminobutyrate (GABA) degradation in both
prokaryotes and eukaryotes, catalyzing the
(NAD(P)+)-dependent catabolism reaction of succinic
semialdehyde to succinate for metabolism by the citric
acid cycle. The EC number depends on the cofactor:
1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and
1.2.1.16 if both can be used. In Escherichia coli,
succinic semialdehyde dehydrogenase is located in an
unidirectionally transcribed gene cluster encoding
enzymes for GABA degradation and is suggested to be
cotranscribed with succinic semialdehyde transaminase
from a common promoter upstream of SSADH. Similar gene
arrangements can be found in characterized Ralstonia
eutropha and the genome analysis of Bacillus subtilis.
Prokaryotic succinic semialdehyde dehydrogenases
(1.2.1.16) share high sequence homology to characterized
succinic semialdehyde dehydrogenases from rat and human
(1.2.1.24), exhibiting conservation of proposed cofactor
binding residues, and putative active sites (G-237 &
G-242, C-293 & G-259 respectively of rat SSADH).
Eukaryotic SSADH enzymes exclusively utilize NAD+ as a
cofactor, exhibiting little to no NADP+ activity. While
a NADP+ preference has been detected in prokaryotes in
addition to both NADP+- and NAD+-dependencies as in
E.coli, Pseudomonas, and Klebsiella pneumoniae. The
function of this alternative SSADH currently is unknown,
but has been suggested to play a possible role in
4-hydroxyphenylacetic degradation. Just outside the
scope of this model, are several sequences belonging to
clades scoring between trusted and noise. These
sequences may be actual SSADH enzymes, but lack
sufficiently close characterized homologs to make a
definitive assignment at this time. SSADH enzyme belongs
to the aldehyde dehydrogenase family (pfam00171),
sharing a common evolutionary origin and enzymatic
mechanism with lactaldehyde dehydrogenase. Like in
lactaldehyde dehydrogenase and succinate semialdehyde
dehydrogenase, the mammalian catalytic glutamic acid and
cysteine residues are conserved in all the enzymes of
this family (PS00687, PS00070) [Central intermediary
metabolism, Other].
Length = 448
Score = 202 bits (515), Expect = 2e-58
Identities = 104/261 (39%), Positives = 141/261 (54%), Gaps = 28/261 (10%)
Query: 360 KTVTESPLRSYTSHS-------IMAAAAASNLKRVSLELGGKSPLVICADADVD------ 406
+T SPL S + I+ +AS +K+VS+ELGG +P ++ DAD+D
Sbjct: 190 NVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAVEGA 249
Query: 407 MAYYY------CFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
MA + C VCA +R YV + IYD F KK E KVG+ D+ V QGP ++ +
Sbjct: 250 MASKFRNAGQTC-VCA-NRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEK 307
Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 520
KV +I VE+G K+ GGKR G F EPTV SNVT D +++EE FGP+ +
Sbjct: 308 AVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVF 367
Query: 521 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHA-------INAGSAVVPQAPFGGF 573
KF +EVI ANDT+ GLA+ + ++ A A IN G APFGG
Sbjct: 368 KFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAPFGGV 427
Query: 574 KESGIGRELGKAALDEYTELK 594
K+SG+GRE K ++EY E K
Sbjct: 428 KQSGLGREGSKYGIEEYLETK 448
Score = 135 bits (342), Expect = 2e-34
Identities = 61/145 (42%), Positives = 83/145 (57%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
++ + KV +I VE+G K+ GGKR G F EPTV SNVT D +++EE FGP+
Sbjct: 304 INEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPL 363
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
+ KF +EVI ANDT+ GLA+ + ++ A A+ G V IN AP
Sbjct: 364 APVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVAP 423
Query: 336 FGGFKESGIGRELGKAALDEYTELK 360
FGG K+SG+GRE K ++EY E K
Sbjct: 424 FGGVKQSGLGREGSKYGIEEYLETK 448
Score = 134 bits (339), Expect = 5e-34
Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV + IYD F KK E KVG+ D+ V QGP ++ KV +I VE+G K
Sbjct: 266 RLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAK 325
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GGKR G F EPTV SNVT D +++EE FGP+ + KF +EVI ANDT+ G
Sbjct: 326 VVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVG 385
Query: 192 LASGIVTTNIDTANTFAHAINAG--SVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG 249
LA+ + ++ A A+ G ++ + + V+ GG ++G R+G K
Sbjct: 386 LAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVV------APFGGVKQSGLGREGSK- 438
Query: 250 YFIEP 254
Y IE
Sbjct: 439 YGIEE 443
Score = 73.2 bits (180), Expect = 1e-13
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
M+ K G ALAAGC V++KPAEQTPL+AL +A L +QAG P GV++V+ G
Sbjct: 133 MITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITG 182
>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia
aldehyde dehydrogenase AldH (CAJ73105)-like.
Uncharacterized aldehyde dehydrogenase of Candidatus
kuenenia AldH (locus CAJ73105) and similar sequences
with similarity to alpha-aminoadipic semialdehyde
dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31),
Arabidopsis ALDH7B4, and Streptomyces clavuligerus
delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH)
are included in this CD.
Length = 478
Score = 202 bits (516), Expect = 3e-58
Identities = 114/278 (41%), Positives = 158/278 (56%), Gaps = 26/278 (9%)
Query: 343 GIGRELGKAALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
G G E+G+A L E+ ++ V S S + A KRV+LE+GGK+P+++ D
Sbjct: 200 GRGEEVGEA-LVEHPDVDVV--SFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDD 256
Query: 403 ADVDMAY----YYCFVCAG------SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQ 452
AD+D+A + F G SR V E +YD F+K+ VE+A +VGD D+
Sbjct: 257 ADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316
Query: 453 QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIA 508
GP ++ KVLNY + G E+G L GG+R +KGYF+EPTVF++VT D +IA
Sbjct: 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIA 376
Query: 509 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV--- 565
+EEIFGPV +I+ +L+E IE ANDT+YGL+S I T +++ A + AG V
Sbjct: 377 QEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAP 436
Query: 566 -----PQAPFGGFKESGIG-RELGKAALDEYTELKTVT 597
PFGG K+SG G RE G ALD +TE K V
Sbjct: 437 TIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVY 474
Score = 175 bits (447), Expect = 2e-48
Identities = 128/387 (33%), Positives = 174/387 (44%), Gaps = 93/387 (24%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKSC 63
WK PAL G V+ KPAE TP AL + L +AG P GV++V+ G G
Sbjct: 154 WKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGE---------- 203
Query: 64 LSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFT---KVLN 120
+VG+ + + P VD V FT +V
Sbjct: 204 -------------------------------EVGEA----LVEHPDVDVVSFTGSTEVGE 228
Query: 121 YIKSGVEQGGK---LEAGGKRKGDKGYFIEPTVFSNVTDD--FKIARE-EIFGPVQT--- 171
I + K LE GGK P + V DD +A E ++ T
Sbjct: 229 RIGETCARPNKRVALEMGGK---------NPII---VMDDADLDLALEGALWSAFGTTGQ 276
Query: 172 --------IIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTK 223
I+ DE ++R + L G +D IN ++ K
Sbjct: 277 RCTATSRLIVHESVYDEFLKRFVERAKRLRVG---DGLDEETDMGPLINEAQLE-----K 328
Query: 224 VLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII 279
VLNY + G E+G L GG+R +KGYF+EPTVF++VT D +IA+EEIFGPV +I
Sbjct: 329 VLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALI 388
Query: 280 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFG 337
+ +L+E IE ANDT+YGL+S I T +++ A + AG ++N A V PFG
Sbjct: 389 EVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEV-HLPFG 447
Query: 338 GFKESGIG-RELGKAALDEYTELKTVT 363
G K+SG G RE G ALD +TE K V
Sbjct: 448 GVKKSGNGHREAGTTALDAFTEWKAVY 474
>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp.
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The
4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH)
involved in C30 carotenoid synthesis in Methylomonas sp.
strain 16a and other similar sequences are present in
this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde
into 4,4'-diapolycopene-diacid.
Length = 453
Score = 198 bits (505), Expect = 5e-57
Identities = 89/246 (36%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGS------RT 420
T +MAAAA L V LELGGK P+++ ADAD++ A + V AG R
Sbjct: 208 TGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERV 266
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
YV E +YD FV + V KA A + G GP A V ++ V +G K
Sbjct: 267 YVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKAL 326
Query: 481 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
GG R G F EPTV ++V D + REE FGPV ++ DE I AND++YGL+
Sbjct: 327 TGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLS 386
Query: 541 SGIVTTNIDTANTFAHAINAG---------SAVVPQAPFGGFKESGIGRELGKAALDEYT 591
+ + + ++ A A + AG +A +P PFGG K+SG GR G L E+
Sbjct: 387 ASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFC 446
Query: 592 ELKTVT 597
K +
Sbjct: 447 RPKAIA 452
Score = 138 bits (351), Expect = 1e-35
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
+ V +G K GG R G F EPTV ++V D + REE FGPV ++ DE
Sbjct: 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEA 374
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINC--YQAVVPQAPFGGFKESGIG 345
I AND++YGL++ + + ++ A A + AG+V IN A +P PFGG K+SG G
Sbjct: 375 IALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG 434
Query: 346 RELGKAALDEYTELKTVT 363
R G L E+ K +
Sbjct: 435 RRHGAEGLREFCRPKAIA 452
Score = 137 bits (348), Expect = 4e-35
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV E +YD FV + V KA A + G GP A V ++ V +G K
Sbjct: 265 RVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAK 324
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
GG R G F EPTV ++V D + REE FGPV ++ DE I AND++YG
Sbjct: 325 ALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYG 384
Query: 192 LASGIVTTNIDTANTFAHAINAGSV---DAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248
L++ + + ++ A A + AG+V D + + GV+ G GG+R G +
Sbjct: 385 LSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSG----GGRRHGAE 440
Query: 249 G 249
G
Sbjct: 441 G 441
Score = 59.9 bits (146), Expect = 2e-09
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
PALAAG V+LKP+E TPL +A AG P GV+ V+ G G A
Sbjct: 142 PALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGA 190
>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase.
Length = 498
Score = 199 bits (507), Expect = 7e-57
Identities = 100/240 (41%), Positives = 138/240 (57%), Gaps = 21/240 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVD------MAYYY------CFVCAGSRTYVQ 423
+ A AA+ +KRVSLELGG +P ++ DAD+D +A + C VCA +R VQ
Sbjct: 255 LMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTC-VCA-NRILVQ 312
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
E IYD F + + VGD F++ V QGP ++ KV ++++ V +G K+ GG
Sbjct: 313 EGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGG 372
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
KR G F EPTV +VT+D I REE+FGPV + +FKT +E I ANDT+ GLA+ I
Sbjct: 373 KRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYI 432
Query: 544 VTTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
T ++ A + A +N G APFGG K+SG+GRE K +DEY E+K V
Sbjct: 433 FTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
Score = 136 bits (344), Expect = 2e-34
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 9/154 (5%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
IN +V KV ++++ V +G K+ GGKR G F EPTV +VT+D I REE
Sbjct: 346 INEAAVQ-----KVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREE 400
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
+FGPV + +FKT +E I ANDT+ GLA+ I T ++ A + A+ G V +N + +
Sbjct: 401 VFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVN--EGL 458
Query: 331 VP--QAPFGGFKESGIGRELGKAALDEYTELKTV 362
+ APFGG K+SG+GRE K +DEY E+K V
Sbjct: 459 ISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
Score = 127 bits (320), Expect = 4e-31
Identities = 60/149 (40%), Positives = 84/149 (56%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R VQE IYD F + + VGD F++ V QGP ++ KV ++++ V +G K
Sbjct: 308 RILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAK 367
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GGKR G F EPTV +VT+D I REE+FGPV + +FKT +E I ANDT+ G
Sbjct: 368 VLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAG 427
Query: 192 LASGIVTTNIDTANTFAHAINAGSVDAEM 220
LA+ I T ++ A + A+ G V
Sbjct: 428 LAAYIFTRDLQRAWRVSEALEYGIVGVNE 456
Score = 70.5 bits (173), Expect = 9e-13
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M+ K GPALAAGC V++KP+E TPLTAL A L QAG P GV++V+ G P
Sbjct: 176 MITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAP 228
>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde
dehydrogenase-like. NADP+-dependent,
p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH)
which catalyzes oxidation of p-hydroxybenzaldehyde to
p-hydroxybenzoic acid and other related sequences are
included in this CD.
Length = 465
Score = 198 bits (505), Expect = 7e-57
Identities = 97/239 (40%), Positives = 139/239 (58%), Gaps = 21/239 (8%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQEDI 426
A +LK+V+LELGG +P V+ DAD+D A + +C A +R V ED+
Sbjct: 227 GELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDV 286
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
YD FV+K VE+ A GDP D GP ++ +L+ I+ VE+G L GG+ +
Sbjct: 287 YDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAE 346
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
G+ +EPTV S+VT+D +IAREEIFGPV IIK +E +E ANDT+YGL+ + T+
Sbjct: 347 GN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTS 403
Query: 547 NIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
+++ FA I+AG + P PFGG K SG+GR G+ AL+E+T K ++
Sbjct: 404 DLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWIS 462
Score = 136 bits (345), Expect = 1e-34
Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V ED+YD FV+K VE+ A GDP D GP ++ +L+ I+ VE+G
Sbjct: 279 RIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGAT 338
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
L GG+ +G+ +EPTV S+VT+D +IAREEIFGPV IIK +E +E ANDT+YG
Sbjct: 339 LLVGGEAEGN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYG 395
Query: 192 LASGIVTTNIDTANTFAHAINAG 214
L+ + T++++ FA I+AG
Sbjct: 396 LSGAVFTSDLERGVQFARRIDAG 418
Score = 133 bits (337), Expect = 1e-33
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 11/155 (7%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
IN VD +L+ I+ VE+G L GG+ +G+ +EPTV S+VT+D +IAREE
Sbjct: 317 INESQVD-----GLLDKIEQAVEEGATLLVGGEAEGN---VLEPTVLSDVTNDMEIAREE 368
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
IFGPV IIK +E +E ANDT+YGL+ + T++++ FA I+AG IN Q V
Sbjct: 369 IFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHIN-DQPV 427
Query: 331 --VPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
P PFGG K SG+GR G+ AL+E+T K ++
Sbjct: 428 NDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWIS 462
Score = 50.0 bits (120), Expect = 2e-06
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 GPALAAGCPVLLKPAEQTPLTA-LYVAALTQQAGFPDGVISVLPGYG 52
PALA G V+LKPA TP+T L +A + ++AG P GV++V+ G G
Sbjct: 152 APALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAG 198
>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate
dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate
dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic
enzyme of the aldehyde dehydrogenase (ALDH) protein
superfamily. The proline catabolic enzymes, proline
dehydrogenase and Delta(1)-pyrroline-5-carboxylate
dehydrogenase (P5CDH), catalyze the two-step oxidation
of proline to glutamate; P5CDH catalyzes the oxidation
of glutamate semialdehyde, utilizing NAD+ as the
electron acceptor. In some bacteria, the two enzymes are
fused into the bifunctional flavoenzyme, proline
utilization A (PutA). In this CD, monofunctional enzyme
sequences such as seen in the Bacillus subtilis RocA
P5CDH are also present. These enzymes play important
roles in cellular redox control, superoxide generation,
and apoptosis.
Length = 512
Score = 197 bits (504), Expect = 3e-56
Identities = 102/287 (35%), Positives = 144/287 (50%), Gaps = 38/287 (13%)
Query: 343 GIGRELGKAALDE-YTELKTVTESPLRSYTSHSIMAAAA-----ASNLKRVSLELGGKSP 396
G G E+G ++ T S I AA LKRV E+GGK+
Sbjct: 231 GPGEEVGDYLVEHPDVRFIAFTGS---REVGLRIYERAAKVQPGQKWLKRVIAEMGGKNA 287
Query: 397 LVICADADVDMA----YYYCF-----VC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDP 446
+++ DAD+D A F C A SR V E +YD F+++ VE+ A KVGDP
Sbjct: 288 IIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347
Query: 447 FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR--KGDKGYFIEPTVFSNVTDD 504
D V GP +D ++ YI+ G + G+L GG+ +GYF++PT+F++V D
Sbjct: 348 EDPEVYMGPVIDKGARDRIRRYIEIG-KSEGRLLLGGEVLELAAEGYFVQPTIFADVPPD 406
Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG--- 561
++A+EEIFGPV +IK K DE +E ANDT+YGL G+ + + + G
Sbjct: 407 HRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLY 466
Query: 562 ------SAVVPQAPFGGFKESGIGRELGKAA----LDEYTELKTVTE 598
A+V + PFGGFK SG G KA L ++ + KTVTE
Sbjct: 467 ANRKITGALVGRQPFGGFKMSGTG---SKAGGPDYLLQFMQPKTVTE 510
Score = 140 bits (355), Expect = 9e-36
Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V E +YD F+++ VE+ A KVGDP D V GP +D ++ YI+ G + G
Sbjct: 319 SRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIG-KSEG 377
Query: 131 KLEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
+L GG+ +GYF++PT+F++V D ++A+EEIFGPV +IK K DE +E ANDT
Sbjct: 378 RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDT 437
Query: 189 KYGLASGIVTTN 200
+YGL G+ + +
Sbjct: 438 EYGLTGGVFSRS 449
Score = 125 bits (315), Expect = 2e-30
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 24/195 (12%)
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
L+ ++ER K G D I+ G+ D ++ YI+ G + G+
Sbjct: 332 LERLVERTKALKVGDPE-------DPEVYMGPVIDKGARD-----RIRRYIEIG-KSEGR 378
Query: 238 LEAGGKR--KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 295
L GG+ +GYF++PT+F++V D ++A+EEIFGPV +IK K DE +E ANDT+
Sbjct: 379 LLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTE 438
Query: 296 YGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAA- 352
YGL G+ + + + G+++ N A+V + PFGGFK SG G KA
Sbjct: 439 YGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTG---SKAGG 495
Query: 353 ---LDEYTELKTVTE 364
L ++ + KTVTE
Sbjct: 496 PDYLLQFMQPKTVTE 510
Score = 55.7 bits (135), Expect = 4e-08
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
AL G V+LKPAE TP+ A + + ++AG P GV++ LPG G
Sbjct: 190 ALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPG 233
>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional.
Length = 409
Score = 189 bits (483), Expect = 3e-54
Identities = 87/240 (36%), Positives = 127/240 (52%), Gaps = 19/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VC-AGSRTYVQE 424
IMAAAA N+ +V LELGGK+P ++ DAD+D+A VC R YVQ+
Sbjct: 166 IMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQK 224
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKS-VQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
IYD FV + E A + G+P +++ + GP ++A +V + VE+G ++ GG
Sbjct: 225 GIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGG 284
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
K KGY+ PT+ +V + I EE FGPV ++ F TL+E I AND+ YGL S I
Sbjct: 285 KAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSI 344
Query: 544 VTTNIDTANTFAHAINAGSAVVPQAPF-------GGFKESGIGRELGKAALDEYTELKTV 596
T N++ A + G + + F G+++SGIG GK L EY + + V
Sbjct: 345 YTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
Score = 153 bits (389), Expect = 4e-41
Identities = 101/365 (27%), Positives = 151/365 (41%), Gaps = 50/365 (13%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
++A K PAL G +++KP+E TP A+ A + + G P GV +++ G G
Sbjct: 87 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQ--- 143
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVG-DPFDKSVQQGPQVDAVMFTKVL 119
E A KV SV G ++ M
Sbjct: 144 ----------------------------ELAGNPKVAMVSMTGSVSAGEKI---MAAAAK 172
Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR--EEIFGPVQTIIKFKT 177
N K +E GGK A D ++ V S V + ++ E ++ VQ I
Sbjct: 173 NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVY--VQKGIY--- 227
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
D+ + R + + G D A INA +++ V + VE+G +
Sbjct: 228 -DQFVNRLGEAMQAVQFGNPAERNDIA--MGPLINAAALER-----VEQKVARAVEEGAR 279
Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
+ GGK KGY+ PT+ +V + I EE FGPV ++ F TL+E I AND+ YG
Sbjct: 280 VALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYG 339
Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
L S I T N++ A + G +IN Q G+++SGIG GK L EY
Sbjct: 340 LTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYL 399
Query: 358 ELKTV 362
+ + V
Sbjct: 400 QTQVV 404
>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed.
Length = 524
Score = 192 bits (489), Expect = 5e-54
Identities = 92/246 (37%), Positives = 125/246 (50%), Gaps = 21/246 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY----YCFVCAGS------RTYVQE 424
++A A L SLELGGK+P+++ DAD+D A CF AG R YV E
Sbjct: 246 VLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHE 305
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD FV+ V A ++G +D S G + V ++ V +G + AGGK
Sbjct: 306 SIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGK 365
Query: 485 RKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
+ D G F EPTV + VT D ++AREE FGPV ++ +DE +ERANDT YGL + +
Sbjct: 366 ARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASV 425
Query: 544 VTTNIDTANTFAHAINAGSAVVP----------QAPFGGFKESGIGRELGKAALDEYTEL 593
T + A I AG+ V AP GG K+SG+GR G L +YTE
Sbjct: 426 WTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTES 485
Query: 594 KTVTES 599
+T+
Sbjct: 486 QTIATQ 491
Score = 131 bits (333), Expect = 9e-33
Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 214 GS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEI 271
GS + V ++ V +G + AGGK + D G F EPTV + VT D ++AREE
Sbjct: 335 GSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREET 394
Query: 272 FGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-----C 326
FGPV ++ +DE +ERANDT YGL + + T + A I AG+V +N
Sbjct: 395 FGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAA 454
Query: 327 YQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTES 365
+ +V AP GG K+SG+GR G L +YTE +T+
Sbjct: 455 WGSV--DAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491
Score = 129 bits (327), Expect = 6e-32
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV E IYD FV+ V A ++G +D S G + V ++ V +G
Sbjct: 300 RIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGAT 359
Query: 132 LEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+ AGGK + D G F EPTV + VT D ++AREE FGPV ++ +DE +ERANDT Y
Sbjct: 360 VLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPY 419
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL + + T + A I AG+V
Sbjct: 420 GLNASVWTGDTARGRAIAARIRAGTV 445
Score = 59.1 bits (144), Expect = 3e-09
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
PAL AG V+LKP QTPLTAL L +AG P + V+ G GP
Sbjct: 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGP 222
>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like.
Salicylaldehyde dehydrogenase (DoxF, SaliADH,
EC=1.2.1.65) involved in the upper naphthalene catabolic
pathway of Pseudomonas strain C18 and other similar
sequences are present in this CD.
Length = 432
Score = 188 bits (481), Expect = 9e-54
Identities = 91/245 (37%), Positives = 122/245 (49%), Gaps = 28/245 (11%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGS------------RTY 421
I+A AA +LK V LELGGK+P ++ DAD+D A G+ R
Sbjct: 194 RIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA--LFGAFLNSGQICMSTERII 251
Query: 422 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
V E I D FV+K KAAA K+ F V G V A +V + + +G KL
Sbjct: 252 VHESIADEFVEKL--KAAAEKL---FAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVV 306
Query: 482 GGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
GG + G + PT+ NVT D I EE FGPV +II+ K +E + AND++YGL+
Sbjct: 307 GGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLS 366
Query: 541 SGIVTTNIDTANTFAHAINAG-----SAVV---PQAPFGGFKESGIGRELGKAALDEYTE 592
+ + T ++ A A I +G V P P GG K SG GR GK +DE+TE
Sbjct: 367 AAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTE 426
Query: 593 LKTVT 597
K +T
Sbjct: 427 TKWIT 431
Score = 130 bits (330), Expect = 8e-33
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
V A +V + + +G KL GG + G + PT+ NVT D I EE FGP
Sbjct: 282 VSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGP 341
Query: 275 VQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVV--- 331
V +II+ K +E + AND++YGL++ + T ++ A A I +G+V IN V
Sbjct: 342 VVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN--GMTVHDE 399
Query: 332 PQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
P P GG K SG GR GK +DE+TE K +T
Sbjct: 400 PTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431
Score = 111 bits (281), Expect = 2e-26
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V E I D FV+K KAAA K+ F V G V A +V + + +G K
Sbjct: 249 RIIVHESIADEFVEKL--KAAAEKL---FAGPVVLGSLVSAAAADRVKELVDDALSKGAK 303
Query: 132 LEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
L GG + G + PT+ NVT D I EE FGPV +II+ K +E + AND++Y
Sbjct: 304 LVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEY 363
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL++ + T ++ A A I +G+V
Sbjct: 364 GLSAAVFTRDLARALAVAKRIESGAV 389
Score = 46.4 bits (111), Expect = 3e-05
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVL 48
LAAG V+LK +E +P T + + +AG P GV++V+
Sbjct: 122 PLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVV 161
>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase
II-like. NAD-dependent, benzaldehyde dehydrogenase II
(XylC, BenzADH, EC=1.2.1.28) is involved in the
oxidation of benzyl alcohol to benzoate. In
Acinetobacter calcoaceticus, this process is carried out
by the chromosomally encoded, benzyl alcohol
dehydrogenase (xylB) and benzaldehyde dehydrogenase II
(xylC) enzymes; whereas in Pseudomonas putida they are
encoded by TOL plasmids.
Length = 443
Score = 186 bits (474), Expect = 1e-52
Identities = 85/242 (35%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA---------YYYCFVC-AGSRTYVQE 424
+ AA +LK+VSLELGGK+ L++ DAD+D+A + +C A R V E
Sbjct: 204 KVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHE 263
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
+ D + K KA VGDP V GP ++A +V + V G +LEAGG
Sbjct: 264 SVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT 323
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
G F PTV S V EEIFGPV + F + +E + ANDT+YGL++GI+
Sbjct: 324 YDG---LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGII 380
Query: 545 TTNIDTANTFAHAINAGSAVV--------PQAPFGGFKESGIGRELGKAA-LDEYTELKT 595
+ ++ A A + G + P PFGG SG G G A +E+T+ +
Sbjct: 381 SRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQW 440
Query: 596 VT 597
VT
Sbjct: 441 VT 442
Score = 129 bits (326), Expect = 3e-32
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V E + D + K KA VGDP V GP ++A +V + V G +
Sbjct: 258 RHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGAR 317
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
LEAGG G F PTV S V EEIFGPV + F + +E + ANDT+YG
Sbjct: 318 LEAGGTYDG---LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L++GI++ ++ A A + G +
Sbjct: 375 LSAGIISRDVGRAMALADRLRTGML 399
Score = 118 bits (298), Expect = 1e-28
Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
INA +D +V + V G +LEAGG G F PTV S V EE
Sbjct: 296 INARQLD-----RVHAIVDDSVAAGARLEAGGTYDG---LFYRPTVLSGVKPGMPAFDEE 347
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV 330
IFGPV + F + +E + ANDT+YGL++GI++ ++ A A + G + IN Q V
Sbjct: 348 IFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN-DQTV 406
Query: 331 V--PQAPFGGFKESGIGRELGKAA-LDEYTELKTVT 363
P PFGG SG G G A +E+T+ + VT
Sbjct: 407 NDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442
Score = 52.7 bits (127), Expect = 3e-07
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 7 GPALAAGCPVLLKPAEQTPLTALYV-AALTQQAGFPDGVISVLPG 50
PALA G V+LKP +TP++ V A L ++AG P GV+ VLPG
Sbjct: 132 APALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG 176
>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase;
Provisional.
Length = 475
Score = 187 bits (476), Expect = 1e-52
Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 23/246 (9%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD-------MAYYY-----CFVCAGS 418
T +++AAA S +KR LELGGK+P+++ DAD+D YY C A
Sbjct: 228 TGKHVLSAAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDC--TAAC 284
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQG-G 477
R Y Q IYD V K A KVGDP D+ + GP + A +V +++ G
Sbjct: 285 RIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHI 344
Query: 478 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 537
++ GG+ KGY+ EPT+ + D +I + E+FGPV ++ F D+ + AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404
Query: 538 GLASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEY 590
GLAS + T ++ A+ + + G +V + P GG K+SG G+++ L++Y
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464
Query: 591 TELKTV 596
T ++ V
Sbjct: 465 TVVRHV 470
Score = 130 bits (329), Expect = 2e-32
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG-G 130
R Y Q IYD V K A KVGDP D+ + GP + A +V +++ G
Sbjct: 285 RIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHI 344
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
++ GG+ KGY+ EPT+ + D +I + E+FGPV ++ F D+ + AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GLAS + T ++ A+ + + G
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCT 430
Score = 129 bits (326), Expect = 5e-32
Identities = 42/126 (33%), Positives = 74/126 (58%)
Query: 237 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
++ GG+ KGY+ EPT+ + D +I + E+FGPV ++ F D+ + AND+ Y
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDY 404
Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
GLAS + T ++ A+ + + G W+N + +V + P GG K+SG G+++ L++Y
Sbjct: 405 GLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464
Query: 357 TELKTV 362
T ++ V
Sbjct: 465 TVVRHV 470
Score = 81.9 bits (203), Expect = 2e-16
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
M AWK PALAAG V+LKP+E TPLTAL +A L P GV++V+ G G
Sbjct: 154 MAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGA 205
>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis
succinate-semialdehyde dehydrogenase 2-like.
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and
similar proteins are in this CD. SSADH1 (GabD1,
EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation
of succinate semialdehyde to succinate. SSADH activity
in Mycobacterium tuberculosis is encoded by both gabD1
(Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1
was shown to be much higher than that of GabD2, and
GabD2 (SSADH2) is likely to serve physiologically as a
dehydrogenase for a different aldehyde(s).
Length = 454
Score = 184 bits (470), Expect = 6e-52
Identities = 89/245 (36%), Positives = 125/245 (51%), Gaps = 21/245 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDM----AYYYCFVCAGS------RTYVQE 424
++A A L SLELGGK+P+++ DAD+D A CF AG R YV E
Sbjct: 210 VVAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHE 269
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
+YD FV++ V + A ++G D G + +V ++ V +G + AGG+
Sbjct: 270 SVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329
Query: 485 RKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
+ D G YF EPTV + VT+D ++ EE FGPV +I + DE IE ANDT YGL + +
Sbjct: 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASV 389
Query: 544 VTTNIDTANTFAHAINAGSAVVP----------QAPFGGFKESGIGRELGKAALDEYTEL 593
T + A + AG+ V AP GG K+SG+GR G L +YTE
Sbjct: 390 WTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTET 449
Query: 594 KTVTE 598
+TV
Sbjct: 450 QTVAV 454
Score = 123 bits (312), Expect = 2e-30
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV E +YD FV++ V + A ++G D G + +V ++ V +G
Sbjct: 264 RIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGAT 323
Query: 132 LEAGGKRKGDKG-YFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+ AGG+ + D G YF EPTV + VT+D ++ EE FGPV +I + DE IE ANDT Y
Sbjct: 324 VLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDY 383
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL + + T + A + AG+V
Sbjct: 384 GLNASVWTRDGARGRRIAARLRAGTV 409
Score = 123 bits (310), Expect = 4e-30
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 206 TFAHAINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKG-YFIEPTVFSNVTDD 263
+ + GS + +V ++ V +G + AGG+ + D G YF EPTV + VT+D
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTED 350
Query: 264 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVW 323
++ EE FGPV +I + DE IE ANDT YGL + + T + A + AG+V
Sbjct: 351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVN 410
Query: 324 IN-----CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
+N + ++ AP GG K+SG+GR G L +YTE +TV
Sbjct: 411 VNEGYAAAWASI--DAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
Score = 55.8 bits (135), Expect = 3e-08
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
PAL AG V+LKP QT LTAL+ L +AG P + V+ G G
Sbjct: 141 PALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGS 186
>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like.
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was
first described in the moss Tortula ruralis and is
believed to play an important role in the detoxification
of aldehydes generated in response to desiccation- and
salinity-stress, and ALDH21A1 expression represents a
unique stress tolerance mechanism. So far, of plants,
only the bryophyte sequence has been observed, but
similar protein sequences from bacteria and archaea are
also present in this CD.
Length = 452
Score = 183 bits (468), Expect = 9e-52
Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 27/259 (10%)
Query: 354 DEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----- 408
DE +L + T SP + + A A K+V LELGG + +++ +DAD+D A
Sbjct: 199 DERIKLLSFTGSPAVGW---DLKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQRII 252
Query: 409 ---YYYCF-VCAG-SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
+Y C R V +YD F + V + A K GDP D + GP +
Sbjct: 253 FGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAE 312
Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK 523
+V ++ V+ G KL GGKR G +EPT+ +V D ++ EE+FGPV T+ +
Sbjct: 313 RVEGWVNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPYD 369
Query: 524 TLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV---VP-----QAPFGGFKE 575
DE + ND+K+GL +G+ T +++ A + G V VP P+GG K+
Sbjct: 370 DFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKD 429
Query: 576 SGIGRELGKAALDEYTELK 594
SGIGRE + A++E TE +
Sbjct: 430 SGIGREGVRYAIEEMTEPR 448
Score = 130 bits (329), Expect = 1e-32
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 62 SCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNY 121
SC+S R V +YD F + V + A K GDP D + GP + +V +
Sbjct: 262 SCISV----QRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317
Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
+ V+ G KL GGKR G +EPT+ +V D ++ EE+FGPV T+ + DE
Sbjct: 318 VNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEA 374
Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
+ ND+K+GL +G+ T +++ A + G V
Sbjct: 375 LAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGV 409
Score = 126 bits (320), Expect = 2e-31
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
+V ++ V+ G KL GGKR G +EPT+ +V D ++ EE+FGPV T+ +
Sbjct: 312 ERVEGWVNEAVDAGAKLLTGGKRDGA---LLEPTILEDVPPDMEVNCEEVFGPVVTVEPY 368
Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFK 340
DE + ND+K+GL +G+ T +++ A + G V IN V P+GG K
Sbjct: 369 DDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVK 428
Query: 341 ESGIGRELGKAALDEYTELK 360
+SGIGRE + A++E TE +
Sbjct: 429 DSGIGREGVRYAIEEMTEPR 448
Score = 67.7 bits (166), Expect = 6e-12
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLP 49
++A K PA+AAGCP +LKPA +TPL+AL + + + G P G SVLP
Sbjct: 139 LVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLP 187
>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde
dehydrogenase. Members of this protein family are
2-hydroxymuconic semialdehyde dehydrogenase. Many
aromatic compounds are catabolized by way of the
catechol, via the meta-cleavage pathway, to pyruvate and
acetyl-CoA. This enzyme performs the second of seven
steps in that pathway for catechol degradation [Energy
metabolism, Other].
Length = 481
Score = 184 bits (469), Expect = 1e-51
Identities = 94/250 (37%), Positives = 131/250 (52%), Gaps = 23/250 (9%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCF-----VCAGS- 418
+ T +IM AAA +K VS ELGGK+ ++ AD D D A F VC G+
Sbjct: 229 TRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTE 287
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
R YV+ I+D FV +A + K+G P D + GP + AE KVL+Y VE+G
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347
Query: 479 LEAGG-----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 533
+ GG G +++PT+++ + D ++ EEIFGP I F + +EVI AN
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 534 DTKYGLASGIVTTNIDTANTFAHAINAGSAVVP-------QAPFGGFKESGIGRELGKAA 586
DT YGLA+ + T ++ A+ A + G V + PFGG K SGIGRE G +
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHS 467
Query: 587 LDEYTELKTV 596
L+ YTEL V
Sbjct: 468 LEFYTELTNV 477
Score = 132 bits (333), Expect = 4e-33
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 183 ERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGG 242
RA K G+ D A I+A D KVL+Y VE+G + GG
Sbjct: 305 ARAESLKIGVPD-------DPATNMGPLISAEHRD-----KVLSYYALAVEEGATVVTGG 352
Query: 243 -----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
G +++PT+++ + D ++ EEIFGP I F + +EVI ANDT YG
Sbjct: 353 GVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYG 412
Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
LA+ + T ++ A+ A + G VW+N + + PFGG K SGIGRE G +L+ YT
Sbjct: 413 LAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYT 472
Query: 358 ELKTV 362
EL V
Sbjct: 473 ELTNV 477
Score = 120 bits (303), Expect = 4e-29
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV+ I+D FV +A + K+G P D + GP + A KVL+Y VE+G
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347
Query: 132 LEAGG-----KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
+ GG G +++PT+++ + D ++ EEIFGP I F + +EVI AN
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
DT YGLA+ + T ++ A+ A + G V
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQMEVGIV 437
Score = 64.0 bits (156), Expect = 9e-11
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
++ WK GPALA G V++KP+E+TP TA + + G P GV +V+ G+GP SA
Sbjct: 155 LMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSA 210
>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent
phenylacetaldehyde dehydrogenase PadA-like.
NAD+-dependent, homodimeric, phenylacetaldehyde
dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia
coli involved in the catabolism of 2-phenylethylamine,
and other related sequences, are present in this CD.
Also included is the Pseudomonas fluorescens ST StyD
PADH involved in styrene catabolism, the Sphingomonas
sp. LB126 FldD protein involved in fluorene degradation,
and the Novosphingobium aromaticivorans NahF
salicylaldehyde dehydrogenase involved in the
NAD+-dependent conversion of salicylaldehyde to
salicylate.
Length = 477
Score = 179 bits (455), Expect = 9e-50
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 17/240 (7%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VCAGS-RTYVQE 424
+ AAS+L RV+LELGGK+ DAD+D VCA R YV
Sbjct: 235 KIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHR 294
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
+D V K + ++ +VG P D+SV GP + F KV +Y+ +G ++ GG+
Sbjct: 295 SKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGE 354
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
+GYF++PT+ + D ++ REE FGPV + + ++ +E+I+ NDT +GL + +
Sbjct: 355 ALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVW 414
Query: 545 TTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
T N+ A + I AG+ V P PFGG K+SGIGRE G A +D+YTELK+V
Sbjct: 415 TNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVM 474
Score = 177 bits (451), Expect = 3e-49
Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 51/366 (13%)
Query: 1 MLA-WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW 59
M+A WK G ALA GC +++KP+E TPLT L VA L ++AG PDGV++V+ G G + A
Sbjct: 157 MIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGA--- 213
Query: 60 RKSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVL 119
+ + KV F SV G ++
Sbjct: 214 --------------------------QLISHPDVAKVS--FTGSVATGKKIGR---QAAS 242
Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI--AREEIFGPVQTIIKFKT 177
+ + +E GGK A + D + +E + + ++ A E + +
Sbjct: 243 DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFY------VHRSK 296
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
DE++ + K L+S V + +D + F N F KV +Y+ +G +
Sbjct: 297 FDELVTK---LKQALSSFQVGSPMDESVMFGPLANQPH-----FDKVCSYLDDARAEGDE 348
Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
+ GG+ +GYF++PT+ + D ++ REE FGPV + + ++ +E+I+ NDT +G
Sbjct: 349 IVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFG 408
Query: 298 LASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYT 357
L + + T N+ A + I AG+VW+N + + P PFGG K+SGIGRE G A +D+YT
Sbjct: 409 LTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYT 468
Query: 358 ELKTVT 363
ELK+V
Sbjct: 469 ELKSVM 474
>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde
dehydrogenase PsfA (ACA09737)-like. Included in this CD
is the aldehyde dehydrogenase (PsfA, locus ACA09737) of
Pseudomonas putida involved in furoic acid metabolism.
Transcription of psfA was induced in response to
2-furoic acid, furfuryl alcohol, and furfural.
Length = 455
Score = 177 bits (452), Expect = 2e-49
Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 25/249 (10%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD------------MAYYYCFVCAGS 418
T +IMAAAA LKR+ LELGGK+P ++ DAD+D A +C AGS
Sbjct: 209 TGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCM--AGS 265
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
R VQ I D + + AA KVG D + GP +D +V ++ + G +
Sbjct: 266 RVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAE 325
Query: 479 -LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
+ GG KG F+ PT+ D I +EEIFGPV T+ F E + ANDT
Sbjct: 326 VVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDT 385
Query: 536 KYGLASGIVTTNIDTANTFAHAINAGS-------AVVPQAPFGGFKESGIGRELGKAALD 588
YGLA+ + T ++ A A AI AG+ + +A GG+++SG+GR G AAL+
Sbjct: 386 DYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALE 445
Query: 589 EYTELKTVT 597
++ E K +
Sbjct: 446 DFIEYKHIY 454
Score = 130 bits (328), Expect = 2e-32
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 11/188 (5%)
Query: 179 DEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK- 237
DEV +R LA+ V +D A+ I+ +VD V ++ + G +
Sbjct: 275 DEVRDRLAAR---LAAVKVGPGLDPASDMGPLIDRANVDR-----VDRMVERAIAAGAEV 326
Query: 238 LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 295
+ GG KG F+ PT+ D I +EEIFGPV T+ F E + ANDT
Sbjct: 327 VLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTD 386
Query: 296 YGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDE 355
YGLA+ + T ++ A A AI AG+VWIN + + +A GG+++SG+GR G AAL++
Sbjct: 387 YGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALED 446
Query: 356 YTELKTVT 363
+ E K +
Sbjct: 447 FIEYKHIY 454
Score = 105 bits (264), Expect = 3e-24
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR VQ I D + + AA KVG D + GP +D +V ++ + G
Sbjct: 265 SRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGA 324
Query: 131 K-LEAGGKRKGD--KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
+ + GG KG F+ PT+ D I +EEIFGPV T+ F E + AND
Sbjct: 325 EVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALAND 384
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
T YGLA+ + T ++ A A AI AG+V
Sbjct: 385 TDYGLAASVWTRDLARAMRVARAIRAGTV 413
Score = 48.5 bits (116), Expect = 7e-06
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 7 GPALAAGCPVLLKPAEQTPLTALYVA-ALTQQAGFPDGVISVLPGYGP 53
PALAAGC V++KPA QT + L + P GV+++ G
Sbjct: 139 APALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGS 186
>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent,
lactaldehyde dehydrogenase, ALDH family 21 A1, and
related proteins. ALDH subfamily which includes Tortula
ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22)
and like sequences.
Length = 453
Score = 177 bits (451), Expect = 3e-49
Identities = 100/274 (36%), Positives = 141/274 (51%), Gaps = 28/274 (10%)
Query: 343 GIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICA 401
G LG A A DE + + T S + ++ A A KR++LELGG +P+++
Sbjct: 188 GEREVLGDAFAADERVAMLSFTGS---AAVGEALRANAG---GKRIALELGGNAPVIVDR 241
Query: 402 DADVDMA---------YYYCFVCAG-SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSV 451
DAD+D A Y+ VC R YV E++YD F++ V KVGDP D+
Sbjct: 242 DADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDT 301
Query: 452 QQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 511
GP + E +V +++ VE G +L GG+R G +PTV +V D K++ EE
Sbjct: 302 DVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEE 358
Query: 512 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV------ 565
FGPV II++ +E I AN T YGL +GI T +++ A A + G +V
Sbjct: 359 TFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAF 418
Query: 566 --PQAPFGGFKESGIGRELGKAALDEYTELKTVT 597
PFGG KESG+GRE A++E TE KTV
Sbjct: 419 RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
Score = 120 bits (303), Expect = 3e-29
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R YV E++YD F++ V KVGDP D+ GP + +V +++ VE G +
Sbjct: 269 RIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGAR 328
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
L GG+R G +PTV +V D K++ EE FGPV II++ +E I AN T YG
Sbjct: 329 LLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYG 385
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L +GI T +++ A A + G V
Sbjct: 386 LQAGIFTRDLNVAFKAAEKLEVGGV 410
Score = 119 bits (300), Expect = 7e-29
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+ E +V +++ VE G +L GG+R G +PTV +V D K++ EE FGPV
Sbjct: 307 ISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLSTEETFGPV 363
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQA 334
II++ +E I AN T YGL +GI T +++ A A + G V +N A
Sbjct: 364 VPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWM 423
Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVT 363
PFGG KESG+GRE A++E TE KTV
Sbjct: 424 PFGGVKESGVGREGVPYAMEEMTEEKTVV 452
Score = 62.1 bits (151), Expect = 3e-10
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
++A K PA+A GCPV+LKPA +TPL+AL +A + +AG P+GV+ V+ G
Sbjct: 139 LVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGER 190
>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase;
Provisional.
Length = 514
Score = 178 bits (455), Expect = 3e-49
Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 28/238 (11%)
Query: 384 LKRVSLELGGKSPLVICADADVDMAYYYCFV---------C-AGSRTYVQEDIYDTFVKK 433
LKRV E+GGK +V+ DAD+D+A C A SR V ED+YD ++K
Sbjct: 280 LKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339
Query: 434 AVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
VE VG+P D + GP ++ F K+++YI+ G ++ G+L GG+ KGYFI
Sbjct: 340 VVELTKELTVGNPEDNAYM-GPVINQASFDKIMSYIEIG-KEEGRLVLGGEGDDSKGYFI 397
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTN---IDT 550
+PT+F++V +I +EEIFGPV IK K D +E AN+T+YGL +++ N ++
Sbjct: 398 QPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEK 457
Query: 551 ANTFAHA----INAG--SAVVPQAPFGGFKESGIGRELGKAALDEY----TELKTVTE 598
A H N G A+V PFGGF SG KA +Y + KTV+E
Sbjct: 458 ARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTD---SKAGGPDYLLLFLQAKTVSE 512
Score = 135 bits (341), Expect = 7e-34
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR V ED+YD ++K VE VG+P D + GP ++ F K+++YI+ G ++ G
Sbjct: 324 SRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYM-GPVINQASFDKIMSYIEIG-KEEG 381
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+L GG+ KGYFI+PT+F++V +I +EEIFGPV IK K D +E AN+T+Y
Sbjct: 382 RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEY 441
Query: 191 GLASGIVTTN 200
GL +++ N
Sbjct: 442 GLTGAVISNN 451
Score = 122 bits (308), Expect = 1e-29
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 23/193 (11%)
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
L++V+E + G N + + ++ F K+++YI+ G ++ G+
Sbjct: 337 LEKVVELTKELTVGNP---------EDNAYMGPV----INQASFDKIMSYIEIG-KEEGR 382
Query: 238 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 297
L GG+ KGYFI+PT+F++V +I +EEIFGPV IK K D +E AN+T+YG
Sbjct: 383 LVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYG 442
Query: 298 LASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDE 355
L +++ N + + G+++ N C A+V PFGGF SG KA +
Sbjct: 443 LTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTD---SKAGGPD 499
Query: 356 Y----TELKTVTE 364
Y + KTV+E
Sbjct: 500 YLLLFLQAKTVSE 512
Score = 51.9 bits (125), Expect = 6e-07
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
A+ AG VLLKPA TP+ A + ++AG P GV++ +PG G
Sbjct: 195 AIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSG 238
>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family.
This family describes a branch of the aldehyde
dehydrogenase (NAD) family (see pfam00171) that includes
Rv0768 from Mycobacterium tuberculosis. All members of
this family belong to species predicted to synthesize
mycofactocin, suggesting that this enzyme or another
upstream or downstream in the same pathway might be
mycofactocin-dependent. However, the taxonomic range of
this family is not nearly broad enough to make that
relationship conclusive [Unknown function, Enzymes of
unknown specificity].
Length = 480
Score = 174 bits (444), Expect = 3e-48
Identities = 92/247 (37%), Positives = 132/247 (53%), Gaps = 20/247 (8%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADAD----VDMAYYYCFVCAG------SRT 420
T ++MA AAA+ LK+V LELGGKS ++ DAD MA + + AG +R
Sbjct: 233 TGRAVMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRL 291
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
V YD V A + K GDP D GP + A +V +Y+ V +GG+
Sbjct: 292 VVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351
Query: 481 AGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
GG R D+ G+F+EPTV + + ++ ++AREEIFGPV T+I D+ + AND+ YG
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYG 411
Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYT 591
L+ + + + A A + G+ V APFGG+K+SGIGRE+G A +EY
Sbjct: 412 LSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYL 471
Query: 592 ELKTVTE 598
E K +
Sbjct: 472 ETKLIAT 478
Score = 131 bits (332), Expect = 6e-33
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
+V +Y+ V +GG+ GG R D+ G+F+EPTV + + ++ ++AREEIFGPV T+I
Sbjct: 335 RVQSYLDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIA 394
Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
D+ + AND+ YGL+ + + + A A + G+V +N APFGG+K
Sbjct: 395 HDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYK 454
Query: 341 ESGIGRELGKAALDEYTELKTVTE 364
+SGIGRE+G A +EY E K +
Sbjct: 455 QSGIGREMGVAGFEEYLETKLIAT 478
Score = 106 bits (266), Expect = 2e-24
Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 68 AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
A +R V YD V A + K GDP D GP + A +V +Y+ V
Sbjct: 286 AITTRLVVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVA 345
Query: 128 QGGKLEAGGKRKGDK--GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
+GG+ GG R D+ G+F+EPTV + + ++ ++AREEIFGPV T+I D+ + A
Sbjct: 346 EGGRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIA 405
Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
ND+ YGL+ + + + A A + G+V
Sbjct: 406 NDSPYGLSGTVFGADPERAAAVAARVRTGTV 436
Score = 46.3 bits (110), Expect = 3e-05
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 5 KWGPALAAGCPVLLKPAEQTPLTALYVAAL-TQQAGFPDGVISVLP 49
K GPALAAG V+LKPA TP A + L + FP GV++++
Sbjct: 161 KLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVT 206
>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and
22A1-like. Aldehyde dehydrogenase family members
ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1
(Arabidopsis thaliana, EC=1.2.1.3), and similar
sequences, are in this CD. Significant improvement of
stress tolerance in tobacco plants was observed by
overexpressing the ALDH22A1 gene from maize (Zea mays)
and was accompanied by a reduction of malondialdehyde
derived from cellular lipid peroxidation.
Length = 465
Score = 174 bits (443), Expect = 4e-48
Identities = 89/249 (35%), Positives = 124/249 (49%), Gaps = 24/249 (9%)
Query: 373 HSIMAAAAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFV-----CAGS-RTYV 422
+MAAAA S L V LELGGK P ++ DAD+D + F C G R V
Sbjct: 216 KKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIV 274
Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
E IYD ++ ++ A + G P D V G + F ++ + VE+G +L AG
Sbjct: 275 HEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAG 334
Query: 483 GKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
GKR + +G++ PT+ +VT D KIA+EE+FGPV ++K +E +E AN T+YG
Sbjct: 335 GKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYG 394
Query: 539 LASGIVTTNIDTANTFAHAINAGSA---------VVPQAPFGGFKESGIGRELGKAALDE 589
L + + +I A A + G V Q PFGG K SG GR G+ L
Sbjct: 395 LGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRG 454
Query: 590 YTELKTVTE 598
K+VTE
Sbjct: 455 LCNPKSVTE 463
Score = 125 bits (317), Expect = 5e-31
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V E IYD ++ ++ A + G P D V G + F ++ + VE+G +
Sbjct: 271 RVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGAR 330
Query: 132 LEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
L AGGKR + +G++ PT+ +VT D KIA+EE+FGPV ++K +E +E AN
Sbjct: 331 LLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANS 390
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
T+YGL + + +I A A + G V
Sbjct: 391 TEYGLGASVFGKDIKRARRIASQLETGMV 419
Score = 125 bits (315), Expect = 1e-30
Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 221 FTKVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 276
F ++ + VE+G +L AGGKR + +G++ PT+ +VT D KIA+EE+FGPV
Sbjct: 314 FDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVM 373
Query: 277 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQA--VVPQA 334
++K +E +E AN T+YGL + + +I A A + G V IN + V Q
Sbjct: 374 VVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQL 433
Query: 335 PFGGFKESGIGRELGKAALDEYTELKTVTE 364
PFGG K SG GR G+ L K+VTE
Sbjct: 434 PFGGVKGSGFGRFAGEEGLRGLCNPKSVTE 463
>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde
dehydrogenase PhpJ-like. Putative phosphonoformaldehyde
dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog
reportedly involved in the biosynthesis of
phosphinothricin tripeptides in Streptomyces
viridochromogenes DSM 40736, and similar sequences are
included in this CD.
Length = 451
Score = 173 bits (441), Expect = 5e-48
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 22/238 (9%)
Query: 379 AAASNLKRVSLELGGKSPLVICADADVD----MAYYYCFVCAGS------RTYVQEDIYD 428
AA + KR LELGG PL++ DAD++ +A + +G R V E + D
Sbjct: 216 AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVAD 275
Query: 429 TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD 488
FV VEK+AA VGDP D + G +D E ++ N ++ + QG ++ G +R+G
Sbjct: 276 EFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA 335
Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 548
PTV +V D ++ EE FGPV +I+ K LDE I +N T YGL+SG+ T ++
Sbjct: 336 ---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDL 392
Query: 549 DTANTFAHAINAGSAVV--------PQAPFGGFKESGIG-RELGKAALDEYTELKTVT 597
DT ++ G+ V +PFGG K+SG+G +E + A+ E T +KT +
Sbjct: 393 DTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
Score = 119 bits (300), Expect = 7e-29
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V E + D FV VEK+AA VGDP D + G +D ++ N ++ + QG +
Sbjct: 266 RILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGAR 325
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ G +R+G PTV +V D ++ EE FGPV +I+ K LDE I +N T YG
Sbjct: 326 VLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYG 382
Query: 192 LASGIVTTNIDTANTFAHAINAGSVDA 218
L+SG+ T ++DT ++ G+V+
Sbjct: 383 LSSGVCTNDLDTIKRLVERLDVGTVNV 409
Score = 107 bits (270), Expect = 5e-25
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 226 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 285
N ++ + QG ++ G +R+G PTV +V D ++ EE FGPV +I+ K LD
Sbjct: 314 NRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLD 370
Query: 286 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQ-----APFGGFK 340
E I +N T YGL+SG+ T ++DT ++ G+V +N VP +PFGG K
Sbjct: 371 EAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN----EVPGFRSELSPFGGVK 426
Query: 341 ESGIG-RELGKAALDEYTELKTVT 363
+SG+G +E + A+ E T +KT +
Sbjct: 427 DSGLGGKEGVREAMKEMTNVKTYS 450
Score = 60.1 bits (146), Expect = 2e-09
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
+A K PA+AA ++LKP+E+TPL+A+Y+A L +AG P ++SV+ G
Sbjct: 136 QVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTG 185
>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like.
Uncharacterized aldehyde dehydrogenase family 16 member
A1 (ALDH16A1) and other related sequences are present in
this CD. The active site cysteine and glutamate residues
are not conserved in the human ALDH16A1 protein
sequence.
Length = 480
Score = 173 bits (440), Expect = 1e-47
Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 21/235 (8%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY------------YYCFVCAGSRTYV 422
+ A A K++SLELGGKSP ++ DAD+D A C CAGSR V
Sbjct: 240 ALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVC--CAGSRLLV 297
Query: 423 QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAG 482
QE + + ++K E+ + +VGDP DK++ G VD ++ ++ G +G +
Sbjct: 298 QESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQP 357
Query: 483 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 542
G KG F PT+F+NV +IA+EEIFGPV ++ F+T E + AN+T YGLA+
Sbjct: 358 GADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAAS 417
Query: 543 IVTTNIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEY 590
+ + N+ A A ++ AG + A FGG++ESG GRE GK L EY
Sbjct: 418 VWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEY 472
Score = 127 bits (321), Expect = 2e-31
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 210 AINAGS-VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 268
AI+ G+ VD ++ ++ G +G + G KG F PT+F+NV +IA+
Sbjct: 325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQ 384
Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ 328
EEIFGPV ++ F+T E + AN+T YGLA+ + + N+ A A ++ AG VWIN +
Sbjct: 385 EEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHN 444
Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEY 356
A FGG++ESG GRE GK L EY
Sbjct: 445 LFDAAAGFGGYRESGFGREGGKEGLYEY 472
Score = 114 bits (287), Expect = 5e-27
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR VQE + + ++K E+ + +VGDP DK++ G VD ++ ++ G +G
Sbjct: 293 SRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGA 352
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+ G KG F PT+F+NV +IA+EEIFGPV ++ F+T E + AN+T Y
Sbjct: 353 DVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPY 412
Query: 191 GLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDK 248
GLA+ + + N+ A A ++ AG V N + GG E+G R+G K
Sbjct: 413 GLAASVWSENLSLALEVALSLKAGVVWINGH----NLFDAAAGFGGYRESGFGREGGK 466
Score = 70.1 bits (172), Expect = 1e-12
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
MLAWK PALA G V+LKPAE TPLTAL A + +AG P GV++++ G G
Sbjct: 163 MLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG 214
>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent
acetaldehyde dehydrogenase II-like. Included in this CD
is the NAD+-dependent, acetaldehyde dehydrogenase II
(AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes)
eutrophus H16 involved in the catabolism of acetoin and
ethanol, and similar proteins, such as, the dimeric
dihydrolipoamide dehydrogenase of the acetoin
dehydrogenase enzyme system of Klebsiella pneumonia.
Also included are sequences similar to the
NAD+-dependent chloroacetaldehyde dehydrogenases (AldA
and AldB) of Xanthobacter autotrophicus GJ10 which are
involved in the degradation of 1,2-dichloroethane. These
proteins apparently require RpoN factors for expression.
Length = 479
Score = 172 bits (438), Expect = 3e-47
Identities = 95/251 (37%), Positives = 130/251 (51%), Gaps = 31/251 (12%)
Query: 380 AASNLKRVSLELGGKSPLVICAD-ADVDMAYY---------YCF----VCA-GSRTYVQE 424
A+ N+ V+LELGGKSP + AD D D A++ + VC SR +QE
Sbjct: 234 ASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQE 293
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
IYD F+++A+E+ A K G+P D G Q E K+L+YI G E+G ++ GG+
Sbjct: 294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGE 353
Query: 485 RK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 540
R G + PT F + +I +EEIFGPV + FK +E +E ANDT YGL
Sbjct: 354 RNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLG 412
Query: 541 SGIVTTNIDTANTFAHAINAGSAVVPQ-------APFGGFKESGIGRELGKAALDEYTEL 593
+G+ T + +TA I AG A FGG+K+SGIGRE K LD Y +
Sbjct: 413 AGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQT 472
Query: 594 KTVTESPLRSY 604
K + L SY
Sbjct: 473 KNL----LVSY 479
Score = 170 bits (433), Expect = 1e-46
Identities = 121/390 (31%), Positives = 162/390 (41%), Gaps = 82/390 (21%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWR 60
M WK PALAAG V+LKPAEQTP + L + L P GV++V+ G+G +
Sbjct: 152 MATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAG---- 206
Query: 61 KSCLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLN 120
PLA R + K A F G + M N
Sbjct: 207 ----KPLASSKR---------------IAKVA-------FTGETTTGRLI---MQYASEN 237
Query: 121 YIKSGVEQGGKLEAGGKRKGDKGYFIEPTVF----SNVTDDFKIAREEIFG--------- 167
I +E GGK P +F + D F E F
Sbjct: 238 IIPVTLELGGK---------------SPNIFFADVMDADDAFFDKALEGFVMFALNQGEV 282
Query: 168 ---PVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKV 224
P + +I+ D +ERA + + G +DT E K+
Sbjct: 283 CTCPSRALIQESIYDRFMERALERVKAIKQG---NPLDTETMIG-----AQASLEQLEKI 334
Query: 225 LNYIKSGVEQGGKLEAGGKRK----GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
L+YI G E+G ++ GG+R G + PT F + +I +EEIFGPV +
Sbjct: 335 LSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTT 393
Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
FK +E +E ANDT YGL +G+ T + +TA I AG VW NCY A FGG+K
Sbjct: 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYK 453
Query: 341 ESGIGRELGKAALDEYTELKTVTESPLRSY 370
+SGIGRE K LD Y + K + L SY
Sbjct: 454 QSGIGRENHKMMLDHYQQTKNL----LVSY 479
>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of
Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized
aldehyde dehydrogenase of Synechococcus sp. PCC 7335
(locus EDX86601) and other similar sequences, are
present in this CD.
Length = 452
Score = 171 bits (436), Expect = 3e-47
Identities = 94/326 (28%), Positives = 134/326 (41%), Gaps = 46/326 (14%)
Query: 309 TANTFAHAINAGSVWINCYQAVV----PQAPFGG------FKESGIGRELGKAALDEYTE 358
N A+ AG+ AV+ PQ P G F E+G+ + + +
Sbjct: 133 AVNAVIPALLAGN-------AVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHET 185
Query: 359 LKTVTESPL--------RSYTSHSIMAAAAASNLKRVSLELGGKSPLVICADAD------ 404
+ P +I AAA +V LELGGK P + DAD
Sbjct: 186 SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAE 244
Query: 405 --VDMAYYYC--FVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAE 460
VD A++ C+ R YV E IYD FV+ V K+GDP D S GP V A
Sbjct: 245 SLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSAR 304
Query: 461 MFTKVLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQ 517
V I + +G + G G ++ PTV +NV ++ REE FGPV
Sbjct: 305 AADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVV 364
Query: 518 TIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV-------PQAPF 570
I+K K+ E I ND++YGL + + T +I A + G+ + P +
Sbjct: 365 GIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAW 424
Query: 571 GGFKESGIGRELGKAALDEYTELKTV 596
G K+SG G L + D+ T K+
Sbjct: 425 TGVKDSGRGVTLSRLGYDQLTRPKSY 450
Score = 126 bits (318), Expect = 4e-31
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP--QVDAVMFTKVLNYIKSGVEQG 129
R YV E IYD FV+ V K+GDP D S GP A F V I + +G
Sbjct: 263 RIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADF--VRAQIADAIAKG 320
Query: 130 GKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAN 186
+ G G ++ PTV +NV ++ REE FGPV I+K K+ E I N
Sbjct: 321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMN 380
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
D++YGL + + T +I A + G+V
Sbjct: 381 DSEYGLTASVWTKDIARAEALGEQLETGTV 410
Score = 109 bits (275), Expect = 2e-25
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 224 VLNYIKSGVEQGGKLEAGGKR---KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIK 280
V I + +G + G G ++ PTV +NV ++ REE FGPV I+K
Sbjct: 309 VRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMK 368
Query: 281 FKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFK 340
K+ E I ND++YGL + + T +I A + G+V++N + P + G K
Sbjct: 369 VKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVK 428
Query: 341 ESGIGRELGKAALDEYTELKTV 362
+SG G L + D+ T K+
Sbjct: 429 DSGRGVTLSRLGYDQLTRPKSY 450
Score = 53.8 bits (130), Expect = 1e-07
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSA 56
PAL AG V+LK + QTPL AA +AG P+GV VL SA
Sbjct: 139 PALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSA 187
>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase
and ALDH family members 6A1 and 6B2. Methylmalonate
semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27)
[acylating] from Bacillus subtilis is involved in valine
metabolism and catalyses the NAD+- and CoA-dependent
oxidation of methylmalonate semialdehyde into
propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and
Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Length = 478
Score = 167 bits (425), Expect = 2e-45
Identities = 83/243 (34%), Positives = 112/243 (46%), Gaps = 24/243 (9%)
Query: 380 AASNLKRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSR------TYVQEDIYDT 429
AA+N KRV G K+ V+ DAD++ F AG R D D
Sbjct: 234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADE 293
Query: 430 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR---- 485
++ K VE+A KVG D GP + ++ I+SGVE+G KL G+
Sbjct: 294 WIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVP 353
Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
+ G F+ PT+ NVT D KI +EEIFGPV +I++ TLDE I N YG + I T
Sbjct: 354 GYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFT 413
Query: 546 TNIDTANTFAHAINAGS--------AVVPQAPFGGFKES--GIGRELGKAALDEYTELKT 595
+ A F ++AG + FGG+K S G GK + YT+ KT
Sbjct: 414 RSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKT 473
Query: 596 VTE 598
VT
Sbjct: 474 VTS 476
Score = 131 bits (332), Expect = 8e-33
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 178 LDEVIERANDTK--YGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQG 235
+ +++ERA K G G I+ + + ++ I+SGVE+G
Sbjct: 295 IPKLVERAKKLKVGAGDDPG---------ADMGPVISPAAKE-----RIEGLIESGVEEG 340
Query: 236 GKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 291
KL G+ + G F+ PT+ NVT D KI +EEIFGPV +I++ TLDE I
Sbjct: 341 AKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400
Query: 292 NDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFKES--GIGREL 348
N YG + I T + A F ++AG V IN V + FGG+K S G
Sbjct: 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFY 460
Query: 349 GKAALDEYTELKTVTE 364
GK + YT+ KTVT
Sbjct: 461 GKDGVRFYTQTKTVTS 476
Score = 128 bits (324), Expect = 8e-32
Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 75 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
D D ++ K VE+A KVG D GP + ++ I+SGVE+G KL
Sbjct: 286 AVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVL 345
Query: 135 GGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
G+ + G F+ PT+ NVT D KI +EEIFGPV +I++ TLDE I N Y
Sbjct: 346 DGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPY 405
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
G + I T + A F ++AG V
Sbjct: 406 GNGAAIFTRSGAAARKFQREVDAGMV 431
Score = 58.3 bits (142), Expect = 6e-09
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
W + A+A G +LKP+E+ P A+ +A L Q+AG PDGV++V+ G
Sbjct: 155 WMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG 201
>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate
dehydrogenase, group 2, putative. This enzyme is the
second of two in the degradation of proline to
glutamate. This model represents one of several related
branches of delta-1-pyrroline-5-carboxylate
dehydrogenase. Members of this branch may be associated
with proline dehydrogenase (the other enzyme of the
pathway from proline to glutamate) but have not been
demonstrated experimentally. The branches are not as
closely related to each other as some distinct aldehyde
dehydrogenases are to some; separate models were built
to let each model describe a set of equivalogs [Energy
metabolism, Amino acids and amines].
Length = 511
Score = 163 bits (414), Expect = 7e-44
Identities = 104/282 (36%), Positives = 146/282 (51%), Gaps = 30/282 (10%)
Query: 343 GIGRELGKAALDE-YTELKTVTESPLRSYTSHSIMAAAA-----ASNLKRVSLELGGKSP 396
G G E+G +D T L T T S R + I AA +LKRV E+GGK
Sbjct: 232 GSGSEVGDYLVDHPKTSLITFTGS--REVGTR-IFERAAKVQPGQKHLKRVIAEMGGKDT 288
Query: 397 LVICADADVDMA----YYYCF------VCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDP 446
+++ DAD+++A + F AGSR V E +YD V++ VE + KVG P
Sbjct: 289 VIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPP 348
Query: 447 FDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFK 506
V GP +D + F K++ YI+ G +G +L +GG KGYFI PT+F++V +
Sbjct: 349 DSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKAR 407
Query: 507 IAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---- 562
+A+EEIFGPV I+ DE +E AN+T+YGL G+++ N D N G+
Sbjct: 408 LAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFN 467
Query: 563 -----AVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTVTE 598
A+V PFGGFK SG + G L + + KTVTE
Sbjct: 468 RNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTVTE 509
Score = 139 bits (351), Expect = 3e-35
Identities = 107/362 (29%), Positives = 165/362 (45%), Gaps = 49/362 (13%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYW-RKSCLSPL 67
+ G V+LKPAE P+ A + ++AG P GV+ +PG G Y S +
Sbjct: 191 PIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLI 250
Query: 68 AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
+ V I+ E+AA VQ G + ++K +
Sbjct: 251 TFTGSREVGTRIF--------ERAA----------KVQPGQK-----------HLKRVI- 280
Query: 128 QGGKLEAGGKRK--GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
E GGK D+ IE S T F A ++ + ++ K DEV+ER
Sbjct: 281 ----AEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERF 336
Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 245
+ + + D+A+ + + +D + F K++ YI+ G +G +L +GG
Sbjct: 337 VE----ITESLKVGPPDSADVYVGPV----IDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 246 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 305
KGYFI PT+F++V ++A+EEIFGPV I+ DE +E AN+T+YGL G+++
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISN 447
Query: 306 NIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA-ALDEYTELKTV 362
N D N G+++ N A+V PFGGFK SG + G L + + KTV
Sbjct: 448 NRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
Query: 363 TE 364
TE
Sbjct: 508 TE 509
>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase
superfamily. The aldehyde dehydrogenase superfamily
(ALDH-SF) of NAD(P)+-dependent enzymes, in general,
oxidize a wide range of endogenous and exogenous
aliphatic and aromatic aldehydes to their corresponding
carboxylic acids and play an important role in
detoxification. Besides aldehyde detoxification, many
ALDH isozymes possess multiple additional catalytic and
non-catalytic functions such as participating in
metabolic pathways, or as binding proteins, or
osmoregulants, to mention a few. The enzyme has three
domains, a NAD(P)+ cofactor-binding domain, a catalytic
domain, and a bridging domain; and the active enzyme is
generally either homodimeric or homotetrameric. The
catalytic mechanism is proposed to involve cofactor
binding, resulting in a conformational change and
activation of an invariant catalytic cysteine
nucleophile. The cysteine and aldehyde substrate form an
oxyanion thiohemiacetal intermediate resulting in
hydride transfer to the cofactor and formation of a
thioacylenzyme intermediate. Hydrolysis of the
thioacylenzyme and release of the carboxylic acid
product occurs, and in most cases, the reduced cofactor
dissociates from the enzyme. The evolutionary
phylogenetic tree of ALDHs appears to have an initial
bifurcation between what has been characterized as the
classical aldehyde dehydrogenases, the ALDH family
(ALDH) and extended family members or aldehyde
dehydrogenase-like (ALDH-L) proteins. The ALDH proteins
are represented by enzymes which share a number of
highly conserved residues necessary for catalysis and
cofactor binding and they include such proteins as
retinal dehydrogenase, 10-formyltetrahydrofolate
dehydrogenase, non-phosphorylating glyceraldehyde
3-phosphate dehydrogenase,
delta(1)-pyrroline-5-carboxylate dehydrogenases,
alpha-ketoglutaric semialdehyde dehydrogenase,
alpha-aminoadipic semialdehyde dehydrogenase, coniferyl
aldehyde dehydrogenase and succinate-semialdehyde
dehydrogenase. Included in this larger group are all
human, Arabidopsis, Tortula, fungal, protozoan, and
Drosophila ALDHs identified in families ALDH1 through
ALDH22 with the exception of families ALDH18, ALDH19,
and ALDH20 which are present in the ALDH-like group. The
ALDH-like group is represented by such proteins as
gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA
reductase, and coenzyme A acylating aldehyde
dehydrogenase. All of these proteins have a conserved
cysteine that aligns with the catalytic cysteine of the
ALDH group.
Length = 367
Score = 158 bits (403), Expect = 2e-43
Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 255 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 314
TV +V D IA+EEIFGPV +I+FK +E I ANDT+YGL +G+ T +++ A A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 315 HAINAGSVWINCYQA-VVPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
+ AG+V+IN V P+APFGG K SGIGRE G L+EYT KTV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
Score = 143 bits (364), Expect = 6e-38
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
TV +V D IA+EEIFGPV +I+FK +E I ANDT+YGL +G+ T +++ A A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 556 HAINAGSAVV--------PQAPFGGFKESGIGRELGKAALDEYTELKTVTE 598
+ AG+ + P+APFGG K SGIGRE G L+EYT KTV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
Score = 100 bits (251), Expect = 6e-23
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 149 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 208
TV +V D IA+EEIFGPV +I+FK +E I ANDT+YGL +G+ T +++ A A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 209 HAINAGSV 216
+ AG+V
Sbjct: 317 ERLRAGTV 324
Score = 81.5 bits (202), Expect = 1e-16
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
+ AWK PALAAG V+LKP+E TPLTAL +A L Q+AG P GV++V+PG G
Sbjct: 108 LAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGD 160
Score = 29.5 bits (67), Expect = 4.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 71 SRTYVQEDIYDTFVKKAV 88
SR V E IYD FV+K V
Sbjct: 239 SRLLVHESIYDEFVEKLV 256
>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I;
Provisional.
Length = 482
Score = 156 bits (397), Expect = 1e-41
Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 19/237 (8%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF-----------VCAGSRTYVQE 424
+ A ++K+VSLELGG +P ++ DAD+D A VCA +R YVQ+
Sbjct: 241 LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA-NRLYVQD 299
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
+YD F +K + + +GD +K V GP +D + KV +I +E+G ++ GGK
Sbjct: 300 GVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 359
Query: 485 RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIV 544
G F +PT+ +V + K+A+EE FGP+ + +FK +VI +ANDT++GLA+
Sbjct: 360 AHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFY 419
Query: 545 TTNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
++ A IN G APFGG K SG+GRE K +++Y E+K
Sbjct: 420 ARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
Score = 123 bits (309), Expect = 6e-30
Identities = 84/277 (30%), Positives = 122/277 (44%), Gaps = 61/277 (22%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP------M 54
M+ K GPALAAGC ++LKPA QTP +AL +A L +AG P GV +V+ G
Sbjct: 162 MITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELT 221
Query: 55 SAPYWRKSCLSPLAYRSRTYVQE---DIY----------------DTFVKKAVEKAAARK 95
S P RK + R +++ DI D + KAVE A A K
Sbjct: 222 SNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASK 281
Query: 96 ------------------------------------VGDPFDKSVQQGPQVDAVMFTKVL 119
+GD +K V GP +D KV
Sbjct: 282 FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVE 341
Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
+I +E+G ++ GGK G F +PT+ +V + K+A+EE FGP+ + +FK
Sbjct: 342 EHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEA 401
Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
+VI +ANDT++GLA+ ++ A+ G V
Sbjct: 402 DVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 438
Score = 108 bits (270), Expect = 7e-25
Identities = 52/145 (35%), Positives = 81/145 (55%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
+D + KV +I +E+G ++ GGK G F +PT+ +V + K+A+EE FGP+
Sbjct: 332 IDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPL 391
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAP 335
+ +FK +VI +ANDT++GLA+ ++ A+ G V IN AP
Sbjct: 392 APLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAP 451
Query: 336 FGGFKESGIGRELGKAALDEYTELK 360
FGG K SG+GRE K +++Y E+K
Sbjct: 452 FGGIKASGLGREGSKYGIEDYLEIK 476
>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed.
Length = 457
Score = 155 bits (394), Expect = 2e-41
Identities = 83/237 (35%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 377 AAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV---------C-AGSRTYVQEDI 426
AA A +K+ LELGG P ++ AD+D A C A R V D+
Sbjct: 218 AAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADV 277
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 486
YD F +K V + AA +VGDP D GP + +V + V G + GGKR
Sbjct: 278 YDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRP 337
Query: 487 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTT 546
G+F PTV +++T D ++ EE+FGPV ++ + +DE IE AN T +GL S T
Sbjct: 338 DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397
Query: 547 NIDTANTFAHAINAGSAVV-------PQAPFGGFKESGIGRELGKAALDEYTELKTV 596
+ F + AG + P+ PFGG K SG GREL + E+ +KTV
Sbjct: 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
Score = 112 bits (282), Expect = 2e-26
Identities = 53/141 (37%), Positives = 75/141 (53%)
Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
+V + V G + GGKR G+F PTV +++T D ++ EE+FGPV ++ +
Sbjct: 314 DEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRV 373
Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKE 341
+DE IE AN T +GL S T + F + AG V+IN P+ PFGG K
Sbjct: 374 ADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKR 433
Query: 342 SGIGRELGKAALDEYTELKTV 362
SG GREL + E+ +KTV
Sbjct: 434 SGYGRELSAHGIREFCNIKTV 454
Score = 109 bits (275), Expect = 1e-25
Identities = 52/145 (35%), Positives = 73/145 (50%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V D+YD F +K V + AA +VGDP D GP +V + V G
Sbjct: 270 RFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGAT 329
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GGKR G+F PTV +++T D ++ EE+FGPV ++ + +DE IE AN T +G
Sbjct: 330 ILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFG 389
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L S T + F + AG V
Sbjct: 390 LGSNAWTRDEAEQERFIDDLEAGQV 414
Score = 44.3 bits (105), Expect = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVL 48
PAL AG LLK A P TALY+A L ++AGFPDG L
Sbjct: 146 PALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTL 186
>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde
dehydrogenase; Provisional.
Length = 494
Score = 152 bits (385), Expect = 6e-40
Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 24/274 (8%)
Query: 342 SGIGRELGKA-ALDEYTELKTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVIC 400
+G G E G+A + + T S + T ++ A SN+KRV LE GGKS ++
Sbjct: 221 TGFGHEAGQALSRHNDIDAIAFTGS---TRTGKQLLKDAGDSNMKRVWLEAGGKSANIVF 277
Query: 401 ADA-DVDMA---------YYYCFVC-AGSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDK 449
AD D+ A Y VC AG+R ++E I D F+ ++A + G P D
Sbjct: 278 ADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDP 337
Query: 450 SVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR 509
+ G +D V ++I+ G E G+L G+ G I PT+F +V + ++R
Sbjct: 338 ATTMGTLIDCAHADSVHSFIREG-ESKGQLLLDGRNAGLAAA-IGPTIFVDVDPNASLSR 395
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVVPQ-- 567
EEIFGPV + +F + ++ ++ AND++YGL + + T ++ A+ + + AGS V
Sbjct: 396 EEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYN 455
Query: 568 -----APFGGFKESGIGRELGKAALDEYTELKTV 596
PFGG+K+SG GR+ AL+++TELKT+
Sbjct: 456 DGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
Score = 109 bits (273), Expect = 3e-25
Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 7/162 (4%)
Query: 201 IDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNV 260
+D A T I+ D V ++I+ G E G+L G+ G I PT+F +V
Sbjct: 335 LDPATTMGTLIDCAHAD-----SVHSFIREG-ESKGQLLLDGRNAGLAAA-IGPTIFVDV 387
Query: 261 TDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAG 320
+ ++REEIFGPV + +F + ++ ++ AND++YGL + + T ++ A+ + + AG
Sbjct: 388 DPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAG 447
Query: 321 SVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
SV++N Y PFGG+K+SG GR+ AL+++TELKT+
Sbjct: 448 SVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
Score = 92.7 bits (230), Expect = 8e-20
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
+R ++E I D F+ ++A + G P D + G +D V ++I+ G E G
Sbjct: 306 TRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG-ESKG 364
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
+L G+ G I PT+F +V + ++REEIFGPV + +F + ++ ++ AND++Y
Sbjct: 365 QLLLDGRNAGLAAA-IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQY 423
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV------DAEMFTKVLNYIKSG 231
GL + + T ++ A+ + + AGSV D +M Y +SG
Sbjct: 424 GLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSG 470
Score = 78.8 bits (194), Expect = 2e-15
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
WK GPALAAG V+LKP+E++PL+A+ +A L ++AG PDGV++V+ G+G
Sbjct: 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFG 224
>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating
glyceraldehyde 3-phosphate dehydrogenase and ALDH family
11. NADP+-dependent non-phosphorylating glyceraldehyde
3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9)
catalyzes the irreversible oxidation of glyceraldehyde
3-phosphate to 3-phosphoglycerate generating NADPH for
biosynthetic reactions. This CD also includes the
Arabidopsis thaliana osmotic-stress-inducible ALDH
family 11, ALDH11A3 and similar sequences. In
autotrophic eukaryotes, NP-GAPDH generates NADPH for
biosynthetic processes from photosynthetic
glyceraldehyde-3-phosphate exported from the chloroplast
and catalyzes one of the classic glycolytic bypass
reactions unique to plants.
Length = 473
Score = 150 bits (381), Expect = 2e-39
Identities = 82/230 (35%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 385 KRVSLELGGKSPLVICADADVDMAYYYCFVCAGS----------RTYVQEDIYDTFVKKA 434
KR+ LELGGK P ++ DAD+++A A S R V E + D V+
Sbjct: 243 KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELL 302
Query: 435 VEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIE 494
E+ A KVG P+D V P +D + V I V +G + GG R+G G I
Sbjct: 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG--GNLIY 360
Query: 495 PTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTF 554
PT+ VT D ++A EE FGPV II+ ++E IE AN + YGL + I T +I+ A
Sbjct: 361 PTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKL 420
Query: 555 AHAINAGSAVV---PQA-----PFGGFKESGIGRELGKAALDEYTELKTV 596
A A+ G+ + Q PF G K+SGIG + AL T K +
Sbjct: 421 ADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGI 470
Score = 120 bits (304), Expect = 4e-29
Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD--AVMFTKVLNYIKSGVEQG 129
R V E + D V+ E+ A KVG P+D V P +D + F + L I V +G
Sbjct: 287 RVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGL--IDDAVAKG 344
Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
+ GG R+G G I PT+ VT D ++A EE FGPV II+ ++E IE AN +
Sbjct: 345 ATVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSN 402
Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
YGL + I T +I+ A A A+ G+V
Sbjct: 403 YGLQASIFTKDINKARKLADALEVGTV 429
Score = 110 bits (278), Expect = 8e-26
Identities = 54/136 (39%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
I V +G + GG R+G G I PT+ VT D ++A EE FGPV II+ ++E
Sbjct: 337 IDDAVAKGATVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEA 394
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQA-PFGGFKESGIGR 346
IE AN + YGL + I T +I+ A A A+ G+V IN P PF G K+SGIG
Sbjct: 395 IELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT 454
Query: 347 ELGKAALDEYTELKTV 362
+ AL T K +
Sbjct: 455 QGIGDALRSMTRRKGI 470
Score = 46.8 bits (112), Expect = 2e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
PAL G V+ KPA Q L + +A AGFP GV++V+ G G
Sbjct: 164 PALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRG 208
>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic
semialdehyde dehydrogenase, ALDH family members 7A1 and
7B. Alpha-aminoadipic semialdehyde dehydrogenase
(AASADH, EC=1.2.1.31), also known as ALDH7A1,
Antiquitin-1, ALDH7B, or
delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH),
is a NAD+-dependent ALDH. Human ALDH7A1 is involved in
the pipecolic acid pathway of lysine catabolism,
catalyzing the oxidation of alpha-aminoadipic
semialdehyde to alpha-aminoadipate. Arabidopsis
thaliana ALDH7B4 appears to be an
osmotic-stress-inducible ALDH gene encoding a
turgor-responsive or stress-inducible ALDH. The
Streptomyces clavuligerus P6CDH appears to be involved
in cephamycin biosynthesis, catalyzing the second stage
of the two-step conversion of lysine to
alpha-aminoadipic acid. The ALDH7A1 enzyme and others
in this group have been observed as tetramers, yet the
bacterial P6CDH enzyme has been reported as a monomer.
Length = 474
Score = 142 bits (361), Expect = 9e-37
Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 366 PLRSYTSHSIM----AAAAASNLKRVSLELGGKSPLVICADADVDMAY-YYCFVCAGS-- 418
PL S+T + + A A+ R LELGG + +++ DAD+D+A F G+
Sbjct: 216 PLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAG 275
Query: 419 -------RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKS 471
R V E IYD +++ + ++GDP D GP L I+
Sbjct: 276 QRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE 335
Query: 472 GVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIER 531
QGG + GGK G ++EPT+ D I +EE F P+ ++KF TL+E I
Sbjct: 336 AKSQGGTVLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394
Query: 532 ANDTKYGLASGIVTTNIDTANTFAHA---------INAGS--AVVPQAPFGGFKESGIGR 580
N+ GL+S I TT++ A + +N G+ A + A FGG KE+G GR
Sbjct: 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGA-FGGEKETGGGR 453
Query: 581 ELGKAALDEYTELKTVT 597
E G A +Y T T
Sbjct: 454 ESGSDAWKQYMRRSTCT 470
Score = 108 bits (272), Expect = 4e-25
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V E IYD +++ + ++GDP D GP L I+ QGG
Sbjct: 283 RLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGT 342
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GGK G ++EPT+ D I +EE F P+ ++KF TL+E I N+ G
Sbjct: 343 VLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQG 401
Query: 192 LASGIVTTNIDTANTF 207
L+S I TT++ A +
Sbjct: 402 LSSSIFTTDLRNAFRW 417
Score = 88.8 bits (221), Expect = 1e-18
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 211 INAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
+VD + + KS QGG + GGK G ++EPT+ D I +EE
Sbjct: 321 HTKAAVD--NYLAAIEEAKS---QGGTVLFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEE 374
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS------VWI 324
F P+ ++KF TL+E I N+ GL+S I TT++ A + GS V I
Sbjct: 375 TFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGP--KGSDCGIVNVNI 432
Query: 325 NCYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVT 363
A + A FGG KE+G GRE G A +Y T T
Sbjct: 433 GTSGAEIGGA-FGGEKETGGGRESGSDAWKQYMRRSTCT 470
Score = 41.8 bits (99), Expect = 0.001
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 4 WKWGPALAAGC--PVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPG 50
W W A+A C V+ KP+ TPLTA+ V + + G P + S++ G
Sbjct: 149 WGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG 201
>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde
dehydrogenase. This family of genes are members of the
pfam00171 NAD-dependent aldehyde dehydrogenase family.
These genes are observed in Ralstonia eutropha JMP134,
Sinorhizobium meliloti 1021, Burkholderia mallei ATCC
23344, Burkholderia thailandensis E264, Burkholderia
cenocepacia AU 1054, Burkholderia pseudomallei K96243
and 1710b, Burkholderia xenovorans LB400, Burkholderia
sp. 383 and Polaromonas sp. JS666 in close proximity to
the PhnW gene (TIGR02326) encoding 2-aminoethyl
phosphonate aminotransferase (which generates
phosphonoacetaldehyde) and PhnA (TIGR02335) encoding
phosphonoacetate hydrolase (not to be confused with the
alkylphosphonate utilization operon protein PhnA modeled
by TIGR00686). Additionally, transporters believed to be
specific for 2-aminoethyl phosphonate are often present.
PhnW is, in other organisms, coupled with PhnX
(TIGR01422) for the degradation of phosphonoacetaldehyde
(GenProp0238), but PhnX is apparently absent in each of
the organisms containing this aldehyde reductase. PhnA,
characterized in a strain of Pseudomonas fluorescens
that has not het been genome sequenced, is only rarely
found outside of the PhnW and aldehyde dehydrogenase
context. For instance in Rhodopseudomonas and Bordetella
bronchiseptica, where it is adjacent to transporters
presumably specific for the import of phosphonoacetate.
It seems reasonably certain then, that this enzyme
catalyzes the NAD-dependent oxidation of
phosphonoacetaldehyde to phosphonoacetate, bridging the
metabolic gap between PhnW and PhnA. We propose the name
phosphonoacetaldehyde dehydrogenase and the gene symbol
PhnY for this enzyme.
Length = 472
Score = 139 bits (353), Expect = 8e-36
Identities = 85/243 (34%), Positives = 117/243 (48%), Gaps = 32/243 (13%)
Query: 379 AAASNLKRVSLELGGKSPLVICADADVDMAYYYCFVCAGS------------RTYVQEDI 426
AA + +R LELGG PL++ DAD+D A GS R VQE +
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAA--DLAVKGSYKNSGQRCTAVKRMLVQESV 292
Query: 427 YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD---AEMFTKVLNYIKSGVEQGGKLEAGG 483
D F + VEK A + GDP D SV G +D A +F +N + QG +L G
Sbjct: 293 ADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVN---EAIAQGARLLLGN 349
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
R G PTV V + REE FGPV +I+F +D+ I +N T YGL+SG+
Sbjct: 350 VRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGV 406
Query: 544 VTTNIDTANTFAHAINAGSAVVPQ--------APFGGFKESGIGRELG-KAALDEYTELK 594
T +D F + G+ V + PFGG K+SG+G + G + A+ +T LK
Sbjct: 407 CTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLK 466
Query: 595 TVT 597
T +
Sbjct: 467 TYS 469
Score = 103 bits (258), Expect = 2e-23
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVD---AVMFTKVLNYIKSGVEQ 128
R VQE + D F + VEK A + GDP D SV G +D A++F +N + Q
Sbjct: 285 RMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVN---EAIAQ 341
Query: 129 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
G +L G R G PTV V + REE FGPV +I+F +D+ I +N T
Sbjct: 342 GARLLLGNVRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNST 398
Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSVD 217
YGL+SG+ T +D F + G+V+
Sbjct: 399 AYGLSSGVCTNRLDYITRFIAELQVGTVN 427
Score = 94.1 bits (234), Expect = 2e-20
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 181 VIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEA 240
++E+ +YG +D + I+ + A +F +N + QG +L
Sbjct: 300 LVEKTRAWRYG-------DPMDPSVDMGTVIDEAA--AILFEARVN---EAIAQGARLLL 347
Query: 241 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 300
G R G PTV V + REE FGPV +I+F +D+ I +N T YGL+S
Sbjct: 348 GNVRDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSS 404
Query: 301 GIVTTNIDTANTFAHAINAGSVWINCYQAVVP-----QAPFGGFKESGIGRELG-KAALD 354
G+ T +D F + G+V N ++ VP PFGG K+SG+G + G + A+
Sbjct: 405 GVCTNRLDYITRFIAELQVGTV--NVWE--VPGYRLELTPFGGIKDSGLGYKEGVQEAMK 460
Query: 355 EYTELKTVT 363
+T LKT +
Sbjct: 461 SFTNLKTYS 469
Score = 47.9 bits (114), Expect = 1e-05
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
+A K PA+A +++KP+E+TPL+ALY+A + +AG P ++ V+ G
Sbjct: 155 QVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTG 204
>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase;
Provisional.
Length = 462
Score = 138 bits (350), Expect = 2e-35
Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 17/238 (7%)
Query: 376 MAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCF---------VCAGSRTY-VQED 425
+ A A + LK+ LELGG P ++ DAD+++A VCA ++ + ++E
Sbjct: 220 IGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEG 279
Query: 426 IYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKR 485
I F ++ V AAA K+GDP D+ GP ++ ++ + +++ + +G +L GG++
Sbjct: 280 IASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEK 339
Query: 486 KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 545
G + PTV +NVT + REE+FGPV I K + +E AND+++GL++ I T
Sbjct: 340 IAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFT 399
Query: 546 TNIDTANTFAHA-------INAGSAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 596
T+ A A IN A + FGG K+SG GREL L E+ ++TV
Sbjct: 400 TDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
Score = 100 bits (250), Expect = 2e-22
Identities = 51/135 (37%), Positives = 78/135 (57%)
Query: 228 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 287
+++ + +G +L GG++ G + PTV +NVT + REE+FGPV I K +
Sbjct: 323 VEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHA 382
Query: 288 IERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRE 347
+E AND+++GL++ I TT+ A A + G V+IN Y A + FGG K+SG GRE
Sbjct: 383 LELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRE 442
Query: 348 LGKAALDEYTELKTV 362
L L E+ ++TV
Sbjct: 443 LSHFGLHEFCNIQTV 457
Score = 87.2 bits (216), Expect = 3e-18
Identities = 49/149 (32%), Positives = 80/149 (53%)
Query: 68 AYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE 127
A R ++E I F ++ V AAA K+GDP D+ GP + ++ + +++ +
Sbjct: 269 AAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLA 328
Query: 128 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
+G +L GG++ G + PTV +NVT + REE+FGPV I K + +E AND
Sbjct: 329 EGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELAND 388
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
+++GL++ I TT+ A A + G V
Sbjct: 389 SEFGLSATIFTTDETQARQMAARLECGGV 417
>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with
similarity to Tortula ruralis aldehyde dehydrogenase
ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus
RL0313) with sequence similarity to the moss Tortula
ruralis aldehyde dehydrogenase ALDH21A1 (RNP123)
believed to play an important role in the detoxification
of aldehydes generated in response to desiccation- and
salinity-stress, and similar sequences are included in
this CD.
Length = 455
Score = 134 bits (340), Expect = 4e-34
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 386 RVSLELGGKSPLVICADADVDMA---------YYYCFVCAG-SRTYVQEDIYDTFVKKAV 435
R +LE GG +P+++ AD+D Y+ VC R +V +I D F ++
Sbjct: 227 RCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLA 286
Query: 436 EKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEP 495
A VGDP D + GP + +V ++ V G +L GGKR D Y P
Sbjct: 287 AAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--AP 344
Query: 496 TVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFA 555
TV + D K++ +EIFGPV + + LDE I +AN + + T ++D A
Sbjct: 345 TVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAV 404
Query: 556 HAINAGSAV---------VPQAPFGGFKESGIG 579
++A +AV V PF G ++SG G
Sbjct: 405 RRLDA-TAVMVNDHTAFRVDWMPFAGRRQSGYG 436
Score = 108 bits (272), Expect = 3e-25
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R +V +I D F ++ A VGDP D + GP + +V ++ V G +
Sbjct: 270 RVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGAR 329
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
L GGKR D Y PTV + D K++ +EIFGPV + + LDE I +AN
Sbjct: 330 LLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVA 387
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
+ + T ++D A ++A +V
Sbjct: 388 FQAAVFTKDLDVALKAVRRLDATAV 412
Score = 95.6 bits (238), Expect = 6e-21
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 222 TKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
+V ++ V G +L GGKR D Y PTV + D K++ +EIFGPV + +
Sbjct: 314 DRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSY 371
Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFGGFK 340
LDE I +AN + + T ++D A ++A +V +N + A V PF G +
Sbjct: 372 DDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRR 431
Query: 341 ESGIG 345
+SG G
Sbjct: 432 QSGYG 436
Score = 53.6 bits (129), Expect = 2e-07
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 7 GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDG 43
PA+AAGCPV++KPA TPL+ L L +AG P+G
Sbjct: 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182
>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase
AlkH-like. Aldehyde dehydrogenase AlkH (locus name
P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows
Pseudomonas putida to metabolize alkanes and the
aldehyde dehydrogenase AldX of Bacillus subtilis (locus
P46329, EC=1.2.1.3), and similar sequences, are present
in this CD.
Length = 433
Score = 134 bits (339), Expect = 4e-34
Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 30/246 (12%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRT-------YVQ 423
+MAAAA +L V+LELGGKSP ++ AD+ A + F+ AG +T +V
Sbjct: 192 VMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAG-QTCIAPDYVFVH 249
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQ----VDAEMFTKVLNYIKSGVEQGGKL 479
E + D FV+ ++ + G D + + P V+ F ++ + V +G K+
Sbjct: 250 ESVKDAFVE-HLKAEIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306
Query: 480 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
E GG+ + Y I PTV +NVT D KI +EEIFGPV II ++ LDEVIE N L
Sbjct: 307 EFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPL 365
Query: 540 ASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEY 590
A + + + N ++G VV P PFGG SGIG G +
Sbjct: 366 ALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAF 425
Query: 591 TELKTV 596
+ + V
Sbjct: 426 SHERAV 431
Score = 98.8 bits (247), Expect = 4e-22
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
V+ F ++ + V +G K+E GG+ + Y I PTV +NVT D KI +EEIFGPV
Sbjct: 284 VNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPV 342
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
II ++ LDEVIE N LA + + + N ++G V +N + P
Sbjct: 343 LPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPN 402
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTV 362
PFGG SGIG G ++ + V
Sbjct: 403 LPFGGVNNSGIGSYHGVYGFKAFSHERAV 431
Score = 85.4 bits (212), Expect = 1e-17
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQ----VDAVMFTKVLNYIKSGVEQG 129
+V E + D FV+ ++ + G D + + P V+ F ++ + V +G
Sbjct: 247 FVHESVKDAFVE-HLKAEIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKG 303
Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 187
K+E GG+ + Y I PTV +NVT D KI +EEIFGPV II ++ LDEVIE N
Sbjct: 304 AKVEFGGQFDAAQRY-IAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINA 360
Score = 39.9 bits (94), Expect = 0.003
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGV 44
A+AAG +LKP+E TP T+ +A + ++A D V
Sbjct: 123 SAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV 159
>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent
delta(1)-pyrroline-5-carboxylate dehydrogenase-like.
ALDH subfamily of the NAD+-dependent,
delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH,
EC=1.5.1.12). The proline catabolic enzymes, proline
dehydrogenase and P5CDH catalyze the two-step oxidation
of proline to glutamate. P5CDH catalyzes the oxidation
of glutamate semialdehyde, utilizing NAD+ as the
electron acceptor. In some bacteria, the two enzymes are
fused into the bifunctional flavoenzyme, proline
utilization A (PutA). These enzymes play important roles
in cellular redox control, superoxide generation, and
apoptosis. In certain prokaryotes such as Escherichia
coli, PutA is also a transcriptional repressor of the
proline utilization genes. Monofunctional enzyme
sequences such as those seen in the Bacillus RocA P5CDH
are also present in this subfamily as well as the human
ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Length = 500
Score = 132 bits (333), Expect = 6e-33
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 27/240 (11%)
Query: 384 LKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTFV 431
KR+ +E GGK+ +++ AD ++ A+ + C SR + + Y+ +
Sbjct: 263 FKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAA--SRLILTQGAYEPVL 320
Query: 432 KKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
++ +++A VG P + GP +DAE KVL+YI+ G + G+L GGKR +GY
Sbjct: 321 ERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHG-KNEGQLVLGGKRLEGEGY 379
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD--EVIERANDTKYGLASGIVTTNID 549
F+ PTV V +IA+EEIFGPV ++I++K D E +E AN T YGL G+ + +
Sbjct: 380 FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKRE 439
Query: 550 TANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAA-LDEYTELKTVTES 599
+ G+ A+V PFGGFK SG + G L + E+K V E
Sbjct: 440 HLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499
Score = 128 bits (322), Expect = 1e-31
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 47/365 (12%)
Query: 7 GPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPMSAPYWRKS-CLS 65
+A G V+ KPAE + V + +AGFP GV+ LPG G Y + +
Sbjct: 176 VAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIR 235
Query: 66 PLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSG 125
+ + + IY+ + A + + +
Sbjct: 236 GINFTGSLETGKKIYEAAARLAPGQTW----------------------------FKRLY 267
Query: 126 VEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 185
VE GGK D +E V S F ++ + I+ + V+ER
Sbjct: 268 VETGGKNAIIVDETADFELVVEGVVVSA----FGFQGQKCSAASRLILTQGAYEPVLERL 323
Query: 186 NDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK 245
A + + T + +DAE KVL+YI+ G + G+L GGKR
Sbjct: 324 ----LKRAERLSVGPPEENGTDLGPV----IDAEQEAKVLSYIEHG-KNEGQLVLGGKRL 374
Query: 246 GDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD--EVIERANDTKYGLASGIV 303
+GYF+ PTV V +IA+EEIFGPV ++I++K D E +E AN T YGL G+
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 304 TTNIDTANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIGRELGKAA-LDEYTELK 360
+ + + G+++IN A+V PFGGFK SG + G L + E+K
Sbjct: 435 SRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMK 494
Query: 361 TVTES 365
V E
Sbjct: 495 AVAER 499
>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase. Members of this
protein family are 1-pyrroline dehydrogenase (1.5.1.35),
also called gamma-aminobutyraldehyde dehydrogenase. This
enzyme can follow putrescine transaminase (EC 2.6.1.82)
for a two-step conversion of putrescine to
gamma-aminobutyric acid (GABA). The member from
Escherichia coli is characterized as a homotetramer that
binds one NADH per momomer. This enzyme belongs to the
medium-chain aldehyde dehydrogenases, and is quite
similar in sequence to the betaine aldehyde
dehydrogenase (EC 1.2.1.8) family.
Length = 472
Score = 129 bits (326), Expect = 3e-32
Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 19/244 (7%)
Query: 371 TSHSIMAAAAASNLKRVSLELGGKSPLVICADADVD--------MAYYYCF--VCAGSRT 420
T I++ A S +KR +ELGGK+P+++ DAD+D +Y A R
Sbjct: 227 TGEHILSHTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRI 285
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KL 479
Y Q IYDT V+K A K G P D+S + GP +V+ ++ G K+
Sbjct: 286 YAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKV 345
Query: 480 EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGL 539
GG+++ GY+ PT+ + D I ++E+FGPV +I F ++V+ AND++YGL
Sbjct: 346 ITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGL 405
Query: 540 ASGIVTTNIDTANTFAHAINAGSA-------VVPQAPFGGFKESGIGRELGKAALDEYTE 592
AS + T ++ A+ + + G +V + P GG K SG G+++ L++YT
Sbjct: 406 ASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV 465
Query: 593 LKTV 596
++ +
Sbjct: 466 VRHI 469
Score = 93.5 bits (232), Expect = 4e-20
Identities = 41/126 (32%), Positives = 75/126 (59%)
Query: 237 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 296
K+ GG+++ GY+ PT+ + D I ++E+FGPV +I F ++V+ AND++Y
Sbjct: 344 KVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQY 403
Query: 297 GLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVPQAPFGGFKESGIGRELGKAALDEY 356
GLAS + T ++ A+ + + G W+N + +V + P GG K SG G+++ L++Y
Sbjct: 404 GLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 463
Query: 357 TELKTV 362
T ++ +
Sbjct: 464 TVVRHI 469
Score = 91.6 bits (227), Expect = 1e-19
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG- 130
R Y Q IYDT V+K A K G P D+S + GP +V+ ++ G
Sbjct: 284 RIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHI 343
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
K+ GG+++ GY+ PT+ + D I ++E+FGPV +I F ++V+ AND++Y
Sbjct: 344 KVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQY 403
Query: 191 GLASGIVTTNIDTANTFAHAINAG 214
GLAS + T ++ A+ + + G
Sbjct: 404 GLASSVWTKDVGRAHRLSARLQYG 427
Score = 62.3 bits (151), Expect = 3e-10
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
M AWK PALAAG V+LKP+E TPLTAL +A L + FP GV+++L G G
Sbjct: 153 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRG 203
>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde
dehydrogenase family 14 and related proteins. Aldehyde
dehydrogenase family 14 (ALDH14), isolated mainly from
the mitochondrial outer membrane of Saccharomyces
cerevisiae (YMR110C) and most closely related to the
plant and animal ALDHs and fatty ALDHs family 3 members,
and similar fungal sequences, are present in this CD.
Length = 436
Score = 125 bits (316), Expect = 6e-31
Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 34/249 (13%)
Query: 374 SIMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAG------SRTYVQ 423
I+A AAA +L V+LELGGKSP+++ +AD+++A + F AG V
Sbjct: 198 RIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVD 257
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEM-----FTKVLNYIKSGVEQGGK 478
+YD FV+ +KV D F + F ++ + + GK
Sbjct: 258 PSVYDEFVE------ELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLD---TTKGK 308
Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
+ GG+ FI PT+ S+V+ D + EE+FGPV IIK LDE I+ N
Sbjct: 309 VVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTP 367
Query: 539 LASGIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDE 589
LA I T + + +G V+ APFGG +SG G GK D
Sbjct: 368 LALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDT 427
Query: 590 YTELKTVTE 598
+T +TV +
Sbjct: 428 FTHERTVVK 436
Score = 90.0 bits (224), Expect = 3e-19
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 205 NTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDF 264
+ +N F ++ + + GK+ GG+ FI PT+ S+V+ D
Sbjct: 284 PDYTRIVNPRH-----FNRLKSLLD---TTKGKVVIGGEMDEAT-RFIPPTIVSDVSWDD 334
Query: 265 KIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWI 324
+ EE+FGPV IIK LDE I+ N LA I T + + +G V I
Sbjct: 335 SLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVI 394
Query: 325 N-CYQAV-VPQAPFGGFKESGIGRELGKAALDEYTELKTVTE 364
N V V APFGG +SG G GK D +T +TV +
Sbjct: 395 NDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436
Score = 64.2 bits (157), Expect = 7e-11
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 63 CLSPLAYRSRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVM-----FTK 117
C++P V +YD FV+ +KV D F + F +
Sbjct: 248 CVAP----DYVLVDPSVYDEFVE------ELKKVLDEFYPGGANASPDYTRIVNPRHFNR 297
Query: 118 VLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT 177
+ + + GK+ GG+ FI PT+ S+V+ D + EE+FGPV IIK
Sbjct: 298 LKSLLD---TTKGKVVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDD 353
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
LDE I+ N LA I T + + +G V
Sbjct: 354 LDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGV 392
Score = 39.9 bits (94), Expect = 0.004
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
A+AAGC V+LKP+E TP TA +A L + V+ G
Sbjct: 132 AIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQG 172
>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl
aldehyde dehydrogenase, ALDH families 3, 13, and 14, and
other related proteins. ALDH subfamily which includes
NAD(P)+-dependent, aldehyde dehydrogenase, family 3
member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and
fatty aldehyde dehydrogenase, family 3 member A2
(ALDH3A2, EC=1.2.1.3), and also plant ALDH family
members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14
(YMR110C) and the protozoan family 13 member (ALDH13),
as well as coniferyl aldehyde dehydrogenases (CALDH,
EC=1.2.1.68), and other similar sequences, such as the
Pseudomonas putida benzaldehyde dehydrogenase I that is
involved in the metabolism of mandelate.
Length = 426
Score = 123 bits (312), Expect = 2e-30
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRT-------YVQ 423
I+ AAA +L V+LELGGKSP ++ DA++++A F+ AG +T V
Sbjct: 191 IVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAG-QTCIAPDYVLVH 249
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
E I D ++ ++KA G+ +S G ++ F ++ + + GK+ GG
Sbjct: 250 ESIKDELIE-ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVVIGG 303
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
+ ++ Y I PT+ +V+ D + +EEIFGP+ I+ + LDE IE N LA +
Sbjct: 304 QVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYL 362
Query: 544 VTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAALDEYTELK 594
+ + ++G A +P PFGG SG+G GKA D ++ LK
Sbjct: 363 FSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLK 422
Query: 595 TV 596
+V
Sbjct: 423 SV 424
Score = 96.1 bits (240), Expect = 3e-21
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 234 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 293
GK+ GG+ ++ Y I PT+ +V+ D + +EEIFGP+ I+ + LDE IE N
Sbjct: 295 DDGKVVIGGQVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINS 353
Query: 294 TKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA 351
LA + + + ++G V +N A +P PFGG SG+G GKA
Sbjct: 354 RPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKA 413
Query: 352 ALDEYTELKTV 362
D ++ LK+V
Sbjct: 414 GFDTFSHLKSV 424
Score = 71.0 bits (175), Expect = 4e-13
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
V E I D ++ ++KA G+ +S G ++ F ++ + + GK+
Sbjct: 247 LVHESIKDELIE-ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVV 300
Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
GG+ ++ Y I PT+ +V+ D + +EEIFGP+ I+ + LDE IE N LA
Sbjct: 301 IGGQVDKEERY-IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLA 359
Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
+ + + ++G V
Sbjct: 360 LYLFSEDKAVQERVLAETSSGGV 382
Score = 39.8 bits (94), Expect = 0.003
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
A+AAG V+LKP+E P T+ +A L + F ++V+ G
Sbjct: 123 GAIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEG 164
>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase
ywdH-like. Uncharacterized Bacillus subtilis ywdH
aldehyde dehydrogenase (locus P39616) most closely
related to the ALDHs and fatty ALDHs of families 3 and
14, and similar sequences, are included in this CD.
Length = 449
Score = 119 bits (302), Expect = 5e-29
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 28/246 (11%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMA----YYYCFVCAGSRT-------YVQ 423
I+ AAA +L V+LELGGKSP ++ DA++ +A + F+ AG +T V
Sbjct: 191 IVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAG-QTCVAPDYVLVH 249
Query: 424 EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGG 483
E + + F+K+ E+ DP +S G ++ + F ++ + GK+ GG
Sbjct: 250 ESVKEKFIKELKEEIKKFYGEDPL-ESPDYGRIINEKHFDRLAGLLD-----NGKIVFGG 303
Query: 484 KRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
+ Y IEPT+ NVT D + +EEIFGP+ ++ + TLDE IE LA +
Sbjct: 304 NTDRETLY-IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYL 362
Query: 544 VTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELK 594
+ + ++ G + P PFGG SG+G GK + D ++ K
Sbjct: 363 FSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKK 422
Query: 595 TVTESP 600
++ +
Sbjct: 423 SILKKS 428
Score = 86.8 bits (216), Expect = 5e-18
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 207 FAHAINAGSVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKI 266
+ IN F ++ + GK+ GG + Y IEPT+ NVT D +
Sbjct: 278 YGRIINEKH-----FDRLAGLLD-----NGKIVFGGNTDRETLY-IEPTILDNVTWDDPV 326
Query: 267 AREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN- 325
+EEIFGP+ ++ + TLDE IE LA + + + ++ G IN
Sbjct: 327 MQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIND 386
Query: 326 -CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESP 366
P PFGG SG+G GK + D ++ K++ +
Sbjct: 387 TIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKS 428
Score = 69.1 bits (170), Expect = 2e-12
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
V E + + F+K+ E+ DP +S G ++ F ++ + GK+
Sbjct: 247 LVHESVKEKFIKELKEEIKKFYGEDPL-ESPDYGRIINEKHFDRLAGLLD-----NGKIV 300
Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
GG + Y IEPT+ NVT D + +EEIFGP+ ++ + TLDE IE LA
Sbjct: 301 FGGNTDRETLY-IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLA 359
Query: 194 SGIVTTNIDTANTF 207
+ + +
Sbjct: 360 LYLFSEDKKVEKKV 373
Score = 32.5 bits (75), Expect = 0.67
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
A+AAG +LKP+E TP T+ +A + ++ F + ++V+ G
Sbjct: 124 AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG 164
>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate
dehydrogenase, PutA. The proline catabolic enzymes of
the aldehyde dehydrogenase (ALDH) protein superfamily,
proline dehydrogenase and
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH,
(EC=1.5.1.12 )), catalyze the two-step oxidation of
proline to glutamate; P5CDH catalyzes the oxidation of
glutamate semialdehyde, utilizing NAD+ as the electron
acceptor. In some bacteria, the two enzymes are fused
into the bifunctional flavoenzyme, proline utilization A
(PutA) These enzymes play important roles in cellular
redox control, superoxide generation, and apoptosis. In
certain prokaryotes such as Escherichia coli, PutA is
also a transcriptional repressor of the proline
utilization genes.
Length = 518
Score = 112 bits (282), Expect = 4e-26
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 31/235 (13%)
Query: 390 ELGGKSPLVICADADVDMAYYYC----FVCAGSRT------YVQEDIYDTFVKKAVEKAA 439
E GGK+ +++ + A + A F AG R Y+QE+I + F++ A
Sbjct: 279 ETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMA 338
Query: 440 ARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFS 499
+ KVGDP+D S GP +D + + + + L A GYF+ P +
Sbjct: 339 SLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA-WLIAPAPLDDGNGYFVAPGIIE 397
Query: 500 NVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTANTFAHA 557
V E+FGP+ +I+FK LDE IE N T YGL GI + + +
Sbjct: 398 IVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRER 455
Query: 558 INAGS---------AVVPQAPFGGFKESGIGRELGKAA----LDEYTELKTVTES 599
+ AG+ A+V + PFGG+ SG G KA L + KTV+ +
Sbjct: 456 VEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLN 507
Score = 93.4 bits (233), Expect = 5e-20
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
Y+QE+I + F++ A+ KVGDP+D S GP +D + + + + L
Sbjct: 320 YLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEA-WLI 378
Query: 134 AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYG 191
A GYF+ P + V E+FGP+ +I+FK LDE IE N T YG
Sbjct: 379 APAPLDDGNGYFVAPGIIEIVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYG 436
Query: 192 LASGIVTTNIDTANTFAHAINAGSV 216
L GI + + + + AG++
Sbjct: 437 LTLGIHSRDEREIEYWRERVEAGNL 461
Score = 91.9 bits (229), Expect = 1e-19
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVT 304
GYF+ P + V E+FGP+ +I+FK LDE IE N T YGL GI +
Sbjct: 386 GNGYFVAPGIIEIVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHS 443
Query: 305 TNIDTANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIGRELGKAA----LDEYTE 358
+ + + AG+++IN A+V + PFGG+ SG G KA L +
Sbjct: 444 RDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFGN 500
Query: 359 LKTVTES 365
KTV+ +
Sbjct: 501 EKTVSLN 507
Score = 51.4 bits (124), Expect = 8e-07
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
ALAAG V+ KPAEQTPL A L +AG P V+ ++PG G
Sbjct: 191 ALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDG 234
>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase.
Involved in valine catabolism,
methylmalonate-semialdehyde dehydrogenase catalyzes the
irreversible NAD+- and CoA-dependent oxidative
decarboxylation of methylmalonate semialdehyde to
propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase
has been characterized in both prokaryotes and
eukaryotes, functioning as a mammalian tetramer and a
bacterial homodimer. Although similar in monomeric
molecular mass and enzymatic activity, the N-terminal
sequence in P.aeruginosa does not correspond with the
N-terminal sequence predicted for rat liver. Sequence
homology to a variety of prokaryotic and eukaryotic
aldehyde dehydrogenases places MMSDH in the aldehyde
dehydrogenase (NAD+) superfamily (pfam00171), making
MMSDH's CoA requirement unique among known ALDHs.
Methylmalonate semialdehyde dehydrogenase is closely
related to betaine aldehyde dehydrogenase,
2-hydroxymuconic semialdehyde dehydrogenase, and class 1
and 2 aldehyde dehydrogenase. In Bacillus, a highly
homologous protein to methylmalonic acid semialdehyde
dehydrogenase, groups out from the main MMSDH clade with
Listeria and Sulfolobus. This Bacillus protein has been
suggested to be located in an iol operon and/or involved
in myo-inositol catabolism, converting malonic
semialdehyde to acetyl CoA ad CO2. The preceeding
enzymes responsible for valine catabolism are present in
Bacillus, Listeria, and Sulfolobus [Energy metabolism,
Amino acids and amines].
Length = 477
Score = 110 bits (277), Expect = 8e-26
Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 34/278 (12%)
Query: 349 GKAALD---EYTELKTVT---ESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVICAD 402
K A+D E+ ++K V+ +P+ Y + +++ KRV G K+ +V+ D
Sbjct: 202 DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT-----GSAHGKRVQALGGAKNHMVVMPD 256
Query: 403 AD----VDMAYYYCFVCAGSR-----TYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQ 453
AD D + AG R V D +V + E+A ++G D +
Sbjct: 257 ADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEM 316
Query: 454 GPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY----FIEPTVFSNVTDDFKIAR 509
GP + + +V + I G +G ++ G+ GY ++ PT+ V K +
Sbjct: 317 GPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQ 376
Query: 510 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAVV---- 565
EEIFGPV +++ TL+E I N + YG + I T + A F H I G V
Sbjct: 377 EEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPI 436
Query: 566 ----PQAPFGGFKESGIG--RELGKAALDEYTELKTVT 597
P F G+K+S G GK YT KTVT
Sbjct: 437 PVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVT 474
Score = 96.9 bits (241), Expect = 3e-21
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKRKGDKGY----FIEPTVFSNVTDDFKIAREEIFGPVQTI 278
+V + I G +G ++ G+ GY ++ PT+ V K +EEIFGPV +
Sbjct: 327 RVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCV 386
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG 337
++ TL+E I N + YG + I T + A F H I G V +N V +P F
Sbjct: 387 LEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFT 446
Query: 338 GFKESGIG--RELGKAALDEYTELKTVT 363
G+K+S G GK YT KTVT
Sbjct: 447 GWKDSFFGDHHIYGKQGTHFYTRGKTVT 474
Score = 89.6 bits (222), Expect = 6e-19
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 81 DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKRKG 140
D +V + E+A ++G D + GP + +V + I G +G ++ G+
Sbjct: 291 DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYK 350
Query: 141 DKGY----FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 196
GY ++ PT+ V K +EEIFGPV +++ TL+E I N + YG + I
Sbjct: 351 VDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAI 410
Query: 197 VTTNIDTANTFAHAINAGSV 216
T + A F H I G V
Sbjct: 411 FTRDGAAARRFQHEIEVGQV 430
Score = 47.6 bits (113), Expect = 1e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
W + A+A G +LKP+E+ P A+ +A L +AG PDGV++V+ G
Sbjct: 155 WMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG 201
>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like.
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of
Pseudomonas sp. strain HR199 (CalB) which catalyzes the
NAD+-dependent oxidation of coniferyl aldehyde to
ferulic acid, and similar sequences, are present in this
CD.
Length = 434
Score = 109 bits (276), Expect = 9e-26
Identities = 72/270 (26%), Positives = 104/270 (38%), Gaps = 78/270 (28%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYY------------------YCFVCA 416
+M AAA NL V+LELGGKSP +I DAD+ A Y V
Sbjct: 193 VMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251
Query: 417 GSRTYVQEDIYDTFV---KKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV 473
+ FV K AV K +P S+ ++ + ++ ++
Sbjct: 252 DKL--------EEFVAAAKAAVAKMYPTLADNPDYTSI-----INERHYARLQGLLEDAR 298
Query: 474 EQGGKL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTL 525
+G ++ + RK + PT+ NVTDD ++ +EEIFGP+ I+ + +L
Sbjct: 299 AKGARVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSL 352
Query: 526 DEVIERANDTKYGLA-------------------SGIVTTNIDTANTFAHAINAGSAVVP 566
DE I+ N LA SG VT N +T H
Sbjct: 353 DEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN----DTLLH------VAQD 402
Query: 567 QAPFGGFKESGIGRELGKAALDEYTELKTV 596
PFGG SG+G GK ++ K V
Sbjct: 403 DLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432
Score = 75.2 bits (186), Expect = 2e-14
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIA 267
++ + ++ ++ +G ++ + RK + PT+ NVTDD ++
Sbjct: 282 INERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVM 335
Query: 268 REEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN-- 325
+EEIFGP+ I+ + +LDE I+ N LA + + ++G V IN
Sbjct: 336 QEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDT 395
Query: 326 CYQAVVPQAPFGGFKESGIGRELGKAALDEYTELKTV 362
PFGG SG+G GK ++ K V
Sbjct: 396 LLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432
Score = 56.3 bits (137), Expect = 2e-08
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 22/125 (17%)
Query: 74 YVQEDIYDTFV---KKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
V ED + FV K AV K +P S+ ++ + ++ ++ +G
Sbjct: 248 LVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSI-----INERHYARLQGLLEDARAKGA 302
Query: 131 KL--------EAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVI 182
++ + RK + PT+ NVTDD ++ +EEIFGP+ I+ + +LDE I
Sbjct: 303 RVIELNPAGEDFAATRK------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAI 356
Query: 183 ERAND 187
+ N
Sbjct: 357 DYINA 361
Score = 33.6 bits (78), Expect = 0.29
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
ALAAG V++KP+E TP T+ +A L + F + ++V+ G
Sbjct: 125 ALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG 165
>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member.
Length = 508
Score = 110 bits (277), Expect = 1e-25
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 44/283 (15%)
Query: 345 GRELGKA-ALDEYTELKTVTESPLRSYTSHS----IMAAAAASNLKRVSLELGGKSPLVI 399
G E+G+A A D T PL S+T S ++ + + LEL G + +++
Sbjct: 224 GAEIGEAIAKD--------TRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIV 275
Query: 400 CADADVDMAY------------YYCFVCAGSRTYVQEDIYDTFVKKAVEKAAARKVGDPF 447
DAD+ +A C C R + E IYD +++ + K+GDP
Sbjct: 276 MDDADIQLAVRSVLFAAVGTAGQRCTTC--RRLLLHESIYDDVLEQLLTVYKQVKIGDPL 333
Query: 448 DKSVQQGP---QVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDD 504
+K GP + F K + IKS QGGK+ GG +G F++PT+ ++ D
Sbjct: 334 EKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFVQPTIVE-ISPD 389
Query: 505 FKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSAV 564
+ +EE+FGPV ++KFKTL+E IE N GL+S I T N +T + + + +
Sbjct: 390 ADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGI 449
Query: 565 V----PQ------APFGGFKESGIGRELGKAALDEYTELKTVT 597
V P FGG K +G GRE G + +Y T T
Sbjct: 450 VNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492
Score = 91.8 bits (228), Expect = 1e-19
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP---QVDAVMFTKVLNYIKSGVEQ 128
R + E IYD +++ + K+GDP +K GP F K + IKS Q
Sbjct: 305 RLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---Q 361
Query: 129 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
GGK+ GG +G F++PT+ ++ D + +EE+FGPV ++KFKTL+E IE N
Sbjct: 362 GGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSV 420
Query: 189 KYGLASGIVTTNIDTANTF--AHAINAGSVDAEMFTKVLNYIKSGVEQGG-----KLEAG 241
GL+S I T N +T + + G V+ + T +G E GG K G
Sbjct: 421 PQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPT-------NGAEIGGAFGGEKATGG 473
Query: 242 GKRKGD---KGYFIEPTVFSNVTDDFKIAREEIFG 273
G+ G K Y T N ++ +A+ FG
Sbjct: 474 GREAGSDSWKQYMRRSTCTINYGNELPLAQGINFG 508
Score = 79.1 bits (195), Expect = 1e-15
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 219 EMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
+ F K + IKS QGGK+ GG +G F++PT+ ++ D + +EE+FGPV +
Sbjct: 349 KNFEKGIEIIKS---QGGKILTGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYV 404
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTF--AHAINAGSVWINCYQAVVPQ--- 333
+KFKTL+E IE N GL+S I T N +T + + G V +N +P
Sbjct: 405 MKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVN-----IPTNGA 459
Query: 334 ---APFGGFKESGIGRELGKAALDEYTELKTVT 363
FGG K +G GRE G + +Y T T
Sbjct: 460 EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492
>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase; Provisional.
Length = 496
Score = 104 bits (262), Expect = 8e-24
Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 387 VSLELGGKSPLVICADADVDMAYYYC----FVCAGSR------TYVQEDIYDTFVKKAVE 436
+ +ELGGK ++ DAD+D+A F +G R V E + D V+K
Sbjct: 261 LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNA 320
Query: 437 KAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGV----EQGGKLEAGGKRKGDKGYF 492
K A VG P D + + N+I+ V E+G KR+G+
Sbjct: 321 KVAKLTVGPPEDDC-----DITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGN---L 372
Query: 493 IEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTAN 552
I P + NV D +IA EE FGPV +I+ +++E I N + +GL + T +I+ A
Sbjct: 373 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 432
Query: 553 TFAHAINAGSAVVPQA--------PFGGFKESGIGRELGKAALDEYTELK-TVTESPLRS 603
+ A+ G+ + A PF G K+SGIG + +++ T++K TV P S
Sbjct: 433 LISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPS 492
Query: 604 YT 605
YT
Sbjct: 493 YT 494
Score = 85.6 bits (212), Expect = 1e-17
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 226 NYIKSGV----EQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 281
N+I+ V E+G KR+G+ I P + NV D +IA EE FGPV +I+
Sbjct: 346 NFIEGLVMDAKEKGATFCQEWKREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402
Query: 282 KTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP-QAPFGGFK 340
+++E I N + +GL + T +I+ A + A+ G+V IN A P PF G K
Sbjct: 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLK 462
Query: 341 ESGIGRELGKAALDEYTELK-TVTESPLRSYT 371
+SGIG + +++ T++K TV P SYT
Sbjct: 463 DSGIGSQGITNSINMMTKVKSTVINLPKPSYT 494
Score = 77.9 bits (192), Expect = 4e-15
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 75 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGV----EQGG 130
V E + D V+K K A VG P D + V+ N+I+ V E+G
Sbjct: 306 VMESVADALVEKVNAKVAKLTVGPPEDDC-----DITPVVSESSANFIEGLVMDAKEKGA 360
Query: 131 KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKY 190
KR+G+ I P + NV D +IA EE FGPV +I+ +++E I N + +
Sbjct: 361 TFCQEWKREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 417
Query: 191 GLASGIVTTNIDTANTFAHAINAGSV 216
GL + T +I+ A + A+ G+V
Sbjct: 418 GLQGCVFTRDINKAILISDAMETGTV 443
Score = 43.2 bits (102), Expect = 3e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 5 KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
K PAL AG V+LKP Q + AL++ AGFP G+IS + G G
Sbjct: 178 KIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKG 225
>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein;
Provisional.
Length = 493
Score = 104 bits (261), Expect = 1e-23
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSR------TYVQE 424
++ AAA NL +LELGGKSP+++ ++ +A F+ AG V
Sbjct: 200 LVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHR 259
Query: 425 DIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGK 484
I D F++ A+++A G+ KS V+ ++ IK + GGK+ GG+
Sbjct: 260 SIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE 315
Query: 485 -RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 543
+K ++ PT+ N D + +EEIFGP+ I+ ++ +DEV+E N LA
Sbjct: 316 VDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYY 373
Query: 544 VTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTELK 594
+ ++G+ V+ P PFGG SG+G GK D ++ K
Sbjct: 374 FGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPK 433
Query: 595 TV 596
V
Sbjct: 434 PV 435
Score = 79.3 bits (196), Expect = 1e-15
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 235 GGKLEAGGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND 293
GGK+ GG+ +K ++ PT+ N D + +EEIFGP+ I+ ++ +DEV+E N
Sbjct: 307 GGKVVYGGEVDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINS 364
Query: 294 TKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKA 351
LA + ++G+V IN + + P PFGG SG+G GK
Sbjct: 365 RPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKY 424
Query: 352 ALDEYTELKTV 362
D ++ K V
Sbjct: 425 GFDTFSHPKPV 435
Score = 59.7 bits (145), Expect = 2e-09
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 75 VQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEA 134
V I D F++ A+++A G+ KS V+ ++ IK + GGK+
Sbjct: 257 VHRSIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312
Query: 135 GGK-RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLA 193
GG+ +K ++ PT+ N D + +EEIFGP+ I+ ++ +DEV+E N LA
Sbjct: 313 GGEVDIENK--YVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLA 370
Query: 194 SGIVTTNIDTANTFAHAINAGSV 216
+ ++G+V
Sbjct: 371 LYYFGEDKRHKELVLENTSSGAV 393
>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde
dehydrogenase, AstD-like. N-succinylglutamate
5-semialdehyde dehydrogenase or succinylglutamic
semialdehyde dehydrogenase (SGSD, E. coli AstD,
EC=1.2.1.71) involved in L-arginine degradation via the
arginine succinyltransferase (AST) pathway and catalyzes
the NAD+-dependent reduction of succinylglutamate
semialdehyde into succinylglutamate.
Length = 431
Score = 102 bits (256), Expect = 3e-23
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAG------SRTYVQEDIY-DTFVKK 433
K ++LE+GG +PLV+ AD+D A Y F+ AG R V + D F+++
Sbjct: 201 KILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLER 260
Query: 434 AVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFI 493
VE A ++G P + GP + A + L + + GG+ +R F+
Sbjct: 261 LVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFL 320
Query: 494 EPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANT 553
P + +VTD + EEIFGP+ + ++ DE I AN T++GL++G+++ +
Sbjct: 321 SPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFER 379
Query: 554 FAHAINAG------------SAVVPQAPFGGFKESGIGRELGKAALD 588
F I AG S APFGG SG R A D
Sbjct: 380 FLARIRAGIVNWNRPTTGASST----APFGGVGLSGNHRPSAYYAAD 422
Score = 70.0 bits (172), Expect = 1e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 71 SRTYVQEDIY-DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
R V + D F+++ VE A ++G P + GP + A + L + + G
Sbjct: 244 RRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALG 303
Query: 130 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 189
G+ +R F+ P + +VTD + EEIFGP+ + ++ DE I AN T+
Sbjct: 304 GEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATR 362
Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
+GL++G+++ + F I AG V
Sbjct: 363 FGLSAGLLSDDEALFERFLARIRAGIV 389
Score = 69.6 bits (171), Expect = 1e-12
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 232 VEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERA 291
+ GG+ +R F+ P + +VTD + EEIFGP+ + ++ DE I A
Sbjct: 300 LALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALA 358
Query: 292 NDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAVVP-QAPFGGFKESGIGRELGK 350
N T++GL++G+++ + F I AG V N APFGG SG R
Sbjct: 359 NATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAY 418
Query: 351 AALD 354
A D
Sbjct: 419 YAAD 422
Score = 54.6 bits (132), Expect = 9e-08
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
PAL AG V+ KP+E TP A + L ++AG P GV++++ G
Sbjct: 120 PALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG 162
>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2,
and B1 and related proteins. NAD(P)+-dependent,
aldehyde dehydrogenase, family 3 members A1 and B1
(ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde
dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3),
and similar sequences are included in this CD. Human
ALDH3A1 is a homodimer with a critical role in cellular
defense against oxidative stress; it catalyzes the
oxidation of various cellular membrane lipid-derived
aldehydes. Corneal crystalline ALDH3A1 protects the
cornea and underlying lens against UV-induced oxidative
stress. Human ALDH3A2, a microsomal homodimer, catalyzes
the oxidation of long-chain aliphatic aldehydes to fatty
acids. Human ALDH3B1 is highly expressed in the kidney
and liver and catalyzes the oxidation of various medium-
and long-chain saturated and unsaturated aliphatic
aldehydes.
Length = 443
Score = 99.6 bits (249), Expect = 2e-22
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC-------FVCAG----SRTYV- 422
I+ AAA +L V+LELGGKSP + D+D+A F+ AG + YV
Sbjct: 191 IVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVA---ARRIAWGKFINAGQTCIAPDYVL 247
Query: 423 -QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
++ + FV+ +K G+ +S G ++ F ++ + GGK+
Sbjct: 248 CTPEVQEKFVEAL-KKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS-----GGKVAI 301
Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
GG + +K +I PTV ++V + +EEIFGP+ I+ LDE IE N + LA
Sbjct: 302 GG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLAL 360
Query: 542 GIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIGRELGKAALDEYTE 592
+ + N N ++G + PFGG SG+G GK + D ++
Sbjct: 361 YVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSH 420
Query: 593 LKTV 596
++
Sbjct: 421 KRSC 424
Score = 73.0 bits (180), Expect = 1e-13
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
++ F ++ + GGK+ GG + +K +I PTV ++V + +EEIFGP+
Sbjct: 282 INDRHFQRLKKLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPI 335
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQ 333
I+ LDE IE N + LA + + N N ++G V +N +
Sbjct: 336 LPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDS 395
Query: 334 APFGGFKESGIGRELGKAALDEYTELKTV 362
PFGG SG+G GK + D ++ ++
Sbjct: 396 LPFGGVGNSGMGAYHGKYSFDTFSHKRSC 424
Score = 54.9 bits (133), Expect = 6e-08
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 62 SCLSPLAYRSRTYV--QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVL 119
+C++P YV ++ + FV+ +K G+ +S G ++ F ++
Sbjct: 239 TCIAP------DYVLCTPEVQEKFVEAL-KKTLKEFYGEDPKESPDYGRIINDRHFQRLK 291
Query: 120 NYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLD 179
+ GGK+ GG + +K +I PTV ++V + +EEIFGP+ I+ LD
Sbjct: 292 KLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLD 345
Query: 180 EVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
E IE N + LA + + N N ++G V
Sbjct: 346 EAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGV 382
>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate
dehydrogenase, ALDH families 4 and 17.
Delta(1)-pyrroline-5-carboxylate dehydrogenase
(EC=1.5.1.12 ), families 4 and 17: a proline catabolic
enzyme of the aldehyde dehydrogenase (ALDH) protein
superfamily. Delta(1)-pyrroline-5-carboxylate
dehydrogenase (P5CDH), also known as ALDH4A1 in humans,
is a mitochondrial homodimer involved in proline
degradation and catalyzes the NAD + -dependent
conversion of P5C to glutamate. This is a necessary step
in the pathway interconnecting the urea and
tricarboxylic acid cycles. The preferred substrate is
glutamic gamma-semialdehyde, other substrates include
succinic, glutaric and adipic semialdehydes. Also
included in this CD is the Aldh17 Drosophila
melanogaster (Q9VUC0) P5CDH and similar sequences.
Length = 522
Score = 99.6 bits (249), Expect = 5e-22
Identities = 70/222 (31%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 383 NLKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTF 430
R+ E GGK+ ++ ADVD A+ Y C SR YV E ++
Sbjct: 277 TYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAA--SRAYVPESLWPEV 334
Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDK 489
++ +E+ K+GDP D S G +D + F ++ YI ++ AGGK
Sbjct: 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSV 394
Query: 490 GYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF--KTLDEVIERANDT-KYGLASGIVTT 546
GYF+EPTV K+ EEIFGPV T+ + +E +E + T Y L I
Sbjct: 395 GYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQ 454
Query: 547 N---IDTA-NTFAHA-----INAGS--AVVPQAPFGGFKESG 577
+ I A + +A IN AVV Q PFGG + SG
Sbjct: 455 DRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
Score = 77.6 bits (192), Expect = 5e-15
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR YV E ++ ++ +E+ K+GDP D S G +D F ++ YI
Sbjct: 322 SRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPE 381
Query: 131 -KLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF--KTLDEVIERAND 187
++ AGGK GYF+EPTV K+ EEIFGPV T+ + +E +E +
Sbjct: 382 AEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDT 441
Query: 188 T-KYGLASGI 196
T Y L I
Sbjct: 442 TSPYALTGAI 451
Score = 76.5 bits (189), Expect = 1e-14
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 207 FAHAINAGSVDAEMFTKVLNYIKSGVEQGG-KLEAGGKRKGDKGYFIEPTVFSNVTDDFK 265
F++ + A +D + F ++ YI ++ AGGK GYF+EPTV K
Sbjct: 353 FSNFMGA-VIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHK 411
Query: 266 IAREEIFGPVQTIIKF--KTLDEVIERANDT-KYGLASGIVTTN---IDTA-NTFAHAIN 318
+ EEIFGPV T+ + +E +E + T Y L I + I A + +A
Sbjct: 412 LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNA-- 469
Query: 319 AGSVWIN--CYQAVVPQAPFGGFKESG 343
AG+ +IN AVV Q PFGG + SG
Sbjct: 470 AGNFYINDKPTGAVVGQQPFGGARASG 496
Score = 39.9 bits (94), Expect = 0.004
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
PAL G VL KP++ L+ V + ++AG P GVI+ +PG GP+
Sbjct: 193 PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPV 238
>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members
F1, H1, and I1 and related proteins. Aldehyde
dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1,
ALDH3H1, and ALDH3I1), and similar plant sequences, are
in this CD. In Arabidopsis thaliana, stress-regulated
expression of ALDH3I1 was observed in leaves and
osmotic stress expression of ALDH3H1 was observed in
root tissue, whereas, ALDH3F1 expression was not stress
responsive. Functional analysis of ALDH3I1 suggest it
may be involved in a detoxification pathway in plants
that limits aldehyde accumulation and oxidative stress.
Length = 432
Score = 95.2 bits (237), Expect = 8e-21
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVICADADVDMAY-------YYCFVCAG----SRTYV- 422
I+ AAAA +L V+LELGGK P+++ + D+ +A + C G + YV
Sbjct: 192 IIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NNGQACIAPDYVL 249
Query: 423 -QEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEA 481
+E T + A++ + G+ +S V++ F ++ + K+
Sbjct: 250 VEESFAPTLID-ALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD-KIVH 307
Query: 482 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
GG+R Y IEPT+ + D I EEIFGP+ II K ++E IE N LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366
Query: 542 GIVTTNIDTANTFAHAINAGSAVV---------PQAPFGGFKESGIGRELGKAALDEYTE 592
+ T N + ++G PFGG ESG G GK + D ++
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSH 426
Query: 593 LKTV 596
K V
Sbjct: 427 KKAV 430
Score = 81.7 bits (202), Expect = 2e-16
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 241 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 300
GG+R Y IEPT+ + D I EEIFGP+ II K ++E IE N LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366
Query: 301 GIVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDEYTE 358
+ T N + ++G V N Q + PFGG ESG G GK + D ++
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSH 426
Query: 359 LKTV 362
K V
Sbjct: 427 KKAV 430
Score = 55.5 bits (134), Expect = 4e-08
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 135 GGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLAS 194
GG+R Y IEPT+ + D I EEIFGP+ II K ++E IE N LA+
Sbjct: 308 GGERDEKNLY-IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAA 366
Query: 195 GIVTTNIDTANTFAHAINAGSV---DAEMFTKVLNYIKSGVEQGGKLEAG 241
+ T N + ++G V D V+ Y + GG E+G
Sbjct: 367 YVFTKNKELKRRIVAETSSGGVTFNDT-----VVQYAIDTLPFGGVGESG 411
Score = 32.0 bits (73), Expect = 0.85
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQ 37
A+AAG V+LKP+E P T+ +A L +
Sbjct: 125 AIAAGNAVVLKPSELAPATSALLAKLIPE 153
>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase
[acylating].
Length = 604
Score = 95.6 bits (237), Expect = 1e-20
Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 23/253 (9%)
Query: 369 SYTSHSIMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYC----FVCAGSRTYVQE 424
S T+ + A AA+ KR+ +G K+ ++ DA++D F AG R
Sbjct: 336 SNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALS 395
Query: 425 DIY-----DTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKL 479
+ ++ K VE+A A KV + GP + + ++ I+SGV+ G KL
Sbjct: 396 TVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKL 455
Query: 480 EAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
G+ +KG FI PT+ S VT D + +EEIFGPV ++ + DE I N
Sbjct: 456 LLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKN 515
Query: 536 KYGLASGIVTTNIDTANTFAHAINAGS--------AVVPQAPFGGFKESGIG--RELGKA 585
KYG + I T++ A F I AG +P F G K S G GKA
Sbjct: 516 KYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKA 575
Query: 586 ALDEYTELKTVTE 598
+D +T++K VT+
Sbjct: 576 GVDFFTQIKLVTQ 588
Score = 83.6 bits (206), Expect = 8e-17
Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 223 KVLNYIKSGVEQGGKLEAGGKR----KGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 278
++ I+SGV+ G KL G+ +KG FI PT+ S VT D + +EEIFGPV
Sbjct: 440 RICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVC 499
Query: 279 IKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQAV-VPQAPFG 337
++ + DE I N KYG + I T++ A F I AG + IN V +P F
Sbjct: 500 MQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFT 559
Query: 338 GFKESGIG--RELGKAALDEYTELKTVTE 364
G K S G GKA +D +T++K VT+
Sbjct: 560 GNKASFAGDLNFYGKAGVDFFTQIKLVTQ 588
Score = 75.6 bits (185), Expect = 3e-14
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 86 KAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLEAGGKR----KGD 141
K VE+A A KV + GP + ++ I+SGV+ G KL G+ +
Sbjct: 409 KLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE 468
Query: 142 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNI 201
KG FI PT+ S VT D + +EEIFGPV ++ + DE I N KYG + I T++
Sbjct: 469 KGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSG 528
Query: 202 DTANTFAHAINAGSV 216
A F I AG +
Sbjct: 529 AAARKFQMDIEAGQI 543
Score = 40.5 bits (94), Expect = 0.003
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 4 WKWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
W + A+ G +LKP+E+ P ++ +A L +AG PDGV++++ G
Sbjct: 268 WMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHG 314
>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase;
Reviewed.
Length = 487
Score = 91.9 bits (229), Expect = 1e-19
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAG------SRTYVQEDIY-DTFVKK 433
K ++LE+GG +PLVI AD+D A + F+ AG R V + D F+ +
Sbjct: 238 KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLAR 297
Query: 434 AVEKAAARKVGDPF-DKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK-LEAGGKRKGDKGY 491
V A VG + G + + ++ + GGK L + + G
Sbjct: 298 LVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTG- 356
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
+ P + +VT ++ EE FGP+ ++++ DE I AN+T++GL++G+++ + +
Sbjct: 357 LLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDY 415
Query: 552 NTFAHAINAG------------SAVVPQAPFGGFKESG 577
+ F I AG SA APFGG SG
Sbjct: 416 DQFLLEIRAGIVNWNKPLTGASSA----APFGGVGASG 449
Score = 69.2 bits (170), Expect = 2e-12
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 72 RTYVQEDIY-DTFVKKAVEKAAARKVGDPF-DKSVQQGPQVDAVMFTKVLNYIKSGVEQG 129
R V + D F+ + V A VG + G + ++ + G
Sbjct: 282 RLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALG 341
Query: 130 GK-LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 188
GK L + + G + P + +VT ++ EE FGP+ ++++ DE I AN+T
Sbjct: 342 GKSLLEMTQLQAGTG-LLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNT 399
Query: 189 KYGLASGIVTTNIDTANTFAHAINAGSV 216
++GL++G+++ + + + F I AG V
Sbjct: 400 RFGLSAGLLSDDREDYDQFLLEIRAGIV 427
Score = 62.7 bits (153), Expect = 2e-10
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 269 EEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSV-WINCY 327
EE FGP+ ++++ DE I AN+T++GL++G+++ + + + F I AG V W
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPL 433
Query: 328 QAVVPQAPFGGFKESG 343
APFGG SG
Sbjct: 434 TGASSAAPFGGVGASG 449
Score = 50.0 bits (120), Expect = 3e-06
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
PAL AG V+ KP+E TP A L QQAG P GV++++ G
Sbjct: 157 PALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG 199
>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed.
Length = 1038
Score = 91.4 bits (228), Expect = 4e-19
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 421 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE 480
+VQEDI D ++ A KVGDP S GP +DAE + +I+ +++ +L
Sbjct: 837 FVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLL 895
Query: 481 AGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTK 536
A + G+F+ PT F D E+FGP+ +I++K LD+VI+ N T
Sbjct: 896 AQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATG 953
Query: 537 YGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFGGFKESGIG 579
YGL GI + +TA+ A + G+ AVV PFGG SG G
Sbjct: 954 YGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005
Score = 78.3 bits (194), Expect = 5e-15
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 74 YVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGKLE 133
+VQEDI D ++ A KVGDP S GP +DA + +I+ +++ +L
Sbjct: 837 FVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLL 895
Query: 134 AGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTK 189
A + G+F+ PT F D E+FGP+ +I++K LD+VI+ N T
Sbjct: 896 AQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATG 953
Query: 190 YGLASGIVTTNIDTANTFAHAINAGSV 216
YGL GI + +TA+ A + G+V
Sbjct: 954 YGLTLGIHSRIEETADRIADRVRVGNV 980
Score = 75.2 bits (186), Expect = 5e-14
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 217 DAEMFTKVLNYIKSGVEQGGKLEAGGK--RKGDKGYFIEPTVFSNVTDDFKIAREEIFGP 274
DAE + +I+ +++ +L A + G+F+ PT F D E+FGP
Sbjct: 874 DAEAKANLDAHIER-MKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGP 930
Query: 275 VQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV 330
+ +I++K LD+VI+ N T YGL GI + +TA+ A + G+V++N Q AV
Sbjct: 931 ILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAV 990
Query: 331 VPQAPFGGFKESGIG 345
V PFGG SG G
Sbjct: 991 VGVQPFGGQGLSGTG 1005
Score = 59.8 bits (146), Expect = 3e-09
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
ALAAG V+ KPAEQTPL A L +AG P V+ +LPG G
Sbjct: 708 ALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGA 752
>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate
dehydrogenase, group 1. This model represents one of
two related branches of delta-1-pyrroline-5-carboxylate
dehydrogenase. The two branches are not as closely
related to each other as some aldehyde dehydrogenases
are to this branch, and separate models are built for
this reason. The enzyme is the second of two in the
degradation of proline to glutamate [Energy metabolism,
Amino acids and amines].
Length = 532
Score = 86.8 bits (215), Expect = 7e-18
Identities = 70/225 (31%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Query: 383 NLKRVSLELGGKSPLVICADADVDM--------AYYY----CFVCAGSRTYVQEDIYDTF 430
N R+ E GGK V+ ADV+ A+ Y C C SR YV ++ F
Sbjct: 276 NFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSAC--SRLYVPHSLWPRF 333
Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLE--AGGKRKGD 488
+ + + + KVGDP D G +D + F K++ YI+ L AGGK
Sbjct: 334 KGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDS 393
Query: 489 KGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIERANDTKYGLASGI 543
GYF+EPTV + + +EEIFGPV T+ K+K + ++++ T YGL +
Sbjct: 394 VGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSYGLTGAV 451
Query: 544 VTTNIDTANTFAHAIN--AGS---------AVVPQAPFGGFKESG 577
+ D + AG+ AVV Q PFGG + SG
Sbjct: 452 FAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
Score = 70.6 bits (173), Expect = 9e-13
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 71 SRTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
SR YV ++ F + + + + KVGDP D G +D F K++ YI+
Sbjct: 321 SRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPS 380
Query: 131 KLE--AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIE 183
L AGGK GYF+EPTV + + +EEIFGPV T+ K+K + ++++
Sbjct: 381 ALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVD 440
Query: 184 RANDTKYGLASGI 196
T YGL +
Sbjct: 441 ST--TSYGLTGAV 451
Score = 70.2 bits (172), Expect = 1e-12
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 178 LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKSGVEQGGK 237
++ + K G + D TF A+ +D + F K++ YI+
Sbjct: 334 KGRLLAELSRVKVG--------DPDDFGTFMGAV----IDEKSFAKIVKYIEHAKSDPSA 381
Query: 238 LE--AGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTII-----KFKTLDEVIER 290
L AGGK GYF+EPTV + + +EEIFGPV T+ K+K + ++++
Sbjct: 382 LTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDS 441
Query: 291 ANDTKYGLASGIVTTNIDTANTFAHAIN--AGSVWIN--CYQAVVPQAPFGGFKESG 343
T YGL + + D + AG+ +IN AVV Q PFGG + SG
Sbjct: 442 T--TSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
Score = 30.9 bits (70), Expect = 2.4
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
PAL G V+ KP++ L+ V + ++AG P GVI+ +PG GP
Sbjct: 192 PALM-GNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGP 236
>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed.
Length = 1208
Score = 84.1 bits (209), Expect = 9e-17
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 421 YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGG 477
+QED+ D T +K A+ ++GDP+ S GP +DAE + +I++ G
Sbjct: 829 CLQEDVADRVLTMLKGAM---DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR 885
Query: 478 KLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 534
+ +KG F+ PT+ D E+FGPV +++FK LD VI+ N
Sbjct: 886 LVHQLPLPAETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINA 943
Query: 535 TKYGLASGIVTTNID-TANTFAHAINAGS---------AVVPQAPFGGFKESGIG 579
T YGL G+ + ID T I AG+ AVV PFGG SG G
Sbjct: 944 TGYGLTFGL-HSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
Score = 72.2 bits (178), Expect = 4e-13
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 74 YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
+QED+ D T +K A+ ++GDP+ S GP +DA + +I++ G
Sbjct: 829 CLQEDVADRVLTMLKGAM---DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR 885
Query: 131 KLEAGGKRKG-DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 187
+ +KG F+ PT+ D E+FGPV +++FK LD VI+ N
Sbjct: 886 LVHQLPLPAETEKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINA 943
Query: 188 TKYGLASGIVTTNID-TANTFAHAINAGSV 216
T YGL G+ + ID T I AG++
Sbjct: 944 TGYGLTFGL-HSRIDETIAHVTSRIRAGNI 972
Score = 71.0 bits (175), Expect = 1e-12
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERANDTKYGLASGIVT 304
+KG F+ PT+ D E+FGPV +++FK LD VI+ N T YGL G+
Sbjct: 897 EKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGL-H 953
Query: 305 TNID-TANTFAHAINAGSVWINCYQ--AVVPQAPFGGFKESGIG 345
+ ID T I AG++++N AVV PFGG SG G
Sbjct: 954 SRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
Score = 62.6 bits (153), Expect = 4e-10
Identities = 23/46 (50%), Positives = 26/46 (56%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGPM 54
AL AG VL KPAEQTPL A L +AG P + +LPG G
Sbjct: 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRT 745
>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase
[Energy production and conversion].
Length = 769
Score = 80.9 bits (200), Expect = 7e-16
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
Query: 413 FVCAGSRT------YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
F AG R +QED+ D T +K A+ A +VG+P + GP +DAE
Sbjct: 375 FDSAGQRCSALRVLCLQEDVADRILTMLKGAM---AELRVGNPDRLTTDVGPVIDAEAKA 431
Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKF 522
+ +I++ +G + KG F+ PT+ ++ + E+FGPV ++++
Sbjct: 432 NIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGPVLHVVRY 489
Query: 523 KT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQAPFG 571
K LDEVI++ N T YGL G+ T +T +AG+ AVV PFG
Sbjct: 490 KRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFG 549
Query: 572 GFKESGIGRELG 583
G SG G + G
Sbjct: 550 GEGLSGTGPKAG 561
Score = 69.4 bits (170), Expect = 3e-12
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGP 274
+DAE + +I++ +G + KG F+ PT+ ++ + E+FGP
Sbjct: 425 IDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGP 482
Query: 275 VQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ--AV 330
V ++++K LDEVI++ N T YGL G+ T +T +AG++++N AV
Sbjct: 483 VLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAV 542
Query: 331 VPQAPFGGFKESGIGRELG 349
V PFGG SG G + G
Sbjct: 543 VGVQPFGGEGLSGTGPKAG 561
Score = 67.0 bits (164), Expect = 1e-11
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 74 YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
+QED+ D T +K A+ A +VG+P + GP +DA + +I++ +G
Sbjct: 389 CLQEDVADRILTMLKGAM---AELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGR 445
Query: 131 KLEAGGKRKGD-KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIERAND 187
+ KG F+ PT+ ++ + E+FGPV ++++K LDEVI++ N
Sbjct: 446 LVHQAAAPNSLQKGTFVAPTLIE--LENLDELQREVFGPVLHVVRYKRDELDEVIDQINA 503
Query: 188 TKYGLASGIVTTNIDTANTFAHAINAGSV 216
T YGL G+ T +T +AG++
Sbjct: 504 TGYGLTLGVHTRIDETIAHVTERAHAGNL 532
Score = 61.3 bits (149), Expect = 1e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYGP 53
ALAAG VL KPAEQTPL A L +AG P GV+ +LPG G
Sbjct: 260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGE 304
>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate
dehydrogenase (PutA C-terminal domain). This model
represents one of several related branches of
delta-1-pyrroline-5-carboxylate dehydrogenase. Members
of this branch are the C-terminal domain of the PutA
bifunctional proline dehydrogenase /
delta-1-pyrroline-5-carboxylate dehydrogenase [Energy
metabolism, Amino acids and amines].
Length = 500
Score = 78.8 bits (194), Expect = 2e-15
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 413 FVCAGSRT------YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFT 463
F AG R VQED+ D T ++ A+++ KVG P + GP +DAE
Sbjct: 299 FDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQEL---KVGVPHLLTTDVGPVIDAEAKQ 355
Query: 464 KVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTI 519
+L +I+ + Q K A G F+ PT+F DD EE+FGPV +
Sbjct: 356 NLLAHIEH-MSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHV 412
Query: 520 IKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGS---------AVVPQA 568
+++K LD+++++ N T YGL G+ + T G+ AVV
Sbjct: 413 VRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQ 472
Query: 569 PFGGFKESGIGRELG 583
PFGG SG G + G
Sbjct: 473 PFGGQGLSGTGPKAG 487
Score = 71.1 bits (174), Expect = 6e-13
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEI 271
+DAE +L +I+ + Q K A G F+ PT+F DD EE+
Sbjct: 349 IDAEAKQNLLAHIEH-MSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEV 405
Query: 272 FGPVQTIIKFKT--LDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWINCYQ- 328
FGPV ++++K LD+++++ N T YGL G+ + T G+ ++N Q
Sbjct: 406 FGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQV 465
Query: 329 -AVVPQAPFGGFKESGIGRELG 349
AVV PFGG SG G + G
Sbjct: 466 GAVVGVQPFGGQGLSGTGPKAG 487
Score = 65.7 bits (160), Expect = 3e-11
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 74 YVQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGG 130
VQED+ D T ++ A+++ KVG P + GP +DA +L +I+ + Q
Sbjct: 313 CVQEDVADRVLTMIQGAMQEL---KVGVPHLLTTDVGPVIDAEAKQNLLAHIEH-MSQTQ 368
Query: 131 KLEAGGKRKGD----KGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKT--LDEVIER 184
K A G F+ PT+F DD EE+FGPV ++++K LD+++++
Sbjct: 369 KKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQ 426
Query: 185 ANDTKYGLASGIVTTNIDTANTFAHAINAGSV 216
N T YGL G+ + T G+
Sbjct: 427 INQTGYGLTMGVHSRIETTYRWIEKHARVGNC 458
Score = 59.2 bits (143), Expect = 3e-09
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
ALAAG V+ KPAEQT L A L Q+AGFP G I +LPG G
Sbjct: 184 ALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRG 227
>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde
dehydrogenase. Members of this protein family are
succinylglutamic semialdehyde dehydrogenase (EC
1.2.1.71), the fourth enzyme in the arginine
succinyltransferase (AST) pathway for arginine
catabolism [Energy metabolism, Amino acids and amines].
Length = 484
Score = 77.1 bits (190), Expect = 7e-15
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 385 KRVSLELGGKSPLVICADADVDMAYYY----CFVCAGSRT------YVQEDIY-DTFVKK 433
K ++LE+GG +PL++ AD+D A + F+ AG R V + D F+ +
Sbjct: 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLAR 295
Query: 434 AVEKAAARKVGDPFDKSVQ--QGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGY 491
VE A VG +D Q G + + ++L + GGK ++
Sbjct: 296 LVEVAERLTVGA-WDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAA 354
Query: 492 FIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTA 551
+ P + +VT ++ EE FGP+ +I++ DE I AN+T++GL++G+++ + +
Sbjct: 355 LLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELY 413
Query: 552 NTFAHAINAG--------SAVVPQAPFGGFKESG 577
+ F I AG + APFGG SG
Sbjct: 414 DRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
Score = 62.8 bits (153), Expect = 2e-10
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 259 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN 318
+VT ++ EE FGP+ +I++ DE I AN+T++GL++G+++ + + + F I
Sbjct: 362 DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIR 421
Query: 319 AGSV-WINCYQAVVPQAPFGGFKESG 343
AG V W APFGG SG
Sbjct: 422 AGIVNWNKPLTGASSAAPFGGIGASG 447
Score = 55.1 bits (133), Expect = 5e-08
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 153 NVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAIN 212
+VT ++ EE FGP+ +I++ DE I AN+T++GL++G+++ + + + F I
Sbjct: 362 DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIR 421
Query: 213 AGSVD 217
AG V+
Sbjct: 422 AGIVN 426
Score = 46.3 bits (110), Expect = 3e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPG 50
PAL AG V+ KP+E TP A L ++AG P GV++++ G
Sbjct: 155 PALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG 197
>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1.
Length = 484
Score = 72.8 bits (178), Expect = 2e-13
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 25/250 (10%)
Query: 370 YTSHS----IMAAAAASNLKRVSLELGGKSPLVICADADVDMAYYYCFV----CAGSRTY 421
YT S ++ AAAA +L V LELGGKSP+V+ +D D+ + C +
Sbjct: 194 YTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQAC 253
Query: 422 VQEDI------YDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQ 475
+ D Y V A++K G +S V++ F + L+ + E
Sbjct: 254 ISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDR-LSKLLDEKEV 312
Query: 476 GGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDT 535
K+ GG+ K + I PT+ +V D I EEIFGP+ I+ L+E +
Sbjct: 313 SDKIVYGGE-KDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSR 371
Query: 536 KYGLASGIVTTNIDTANTFAHAINAGSAVVPQA---------PFGGFKESGIGRELGKAA 586
LA+ + T N FA ++AG VV PFGG ESG+G GK +
Sbjct: 372 PKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFS 431
Query: 587 LDEYTELKTV 596
D ++ K V
Sbjct: 432 FDAFSHKKAV 441
Score = 55.8 bits (134), Expect = 4e-08
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 242 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 301
G K + I PT+ +V D I EEIFGP+ I+ L+E + LA+
Sbjct: 319 GGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAY 378
Query: 302 IVTTNIDTANTFAHAINAGSVWIN--CYQAVVPQAPFGGFKESGIGRELGKAALDEYTEL 359
+ T N FA ++AG + +N + PFGG ESG+G GK + D ++
Sbjct: 379 LFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHK 438
Query: 360 KTV 362
K V
Sbjct: 439 KAV 441
Score = 36.2 bits (83), Expect = 0.050
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 136 GKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYGLASG 195
G K + I PT+ +V D I EEIFGP+ I+ L+E + LA+
Sbjct: 319 GGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAY 378
Query: 196 IVTTNIDTANTFAHAINAGSV 216
+ T N FA ++AG +
Sbjct: 379 LFTHNKKLKERFAATVSAGGI 399
>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase.
Length = 484
Score = 71.7 bits (176), Expect = 3e-13
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 37/257 (14%)
Query: 375 IMAAAAASNLKRVSLELGGKSPLVI-CADADVDMAYYYCFV-------CAG----SRTYV 422
I+ AAA +L V+LELGGK P ++ + D + CAG + YV
Sbjct: 199 IIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYV 258
Query: 423 Q-EDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNY-----IKSGVEQG 476
E+ + + + ++ + G+ +S ++ + F ++ N + + + G
Sbjct: 259 LVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHG 318
Query: 477 GKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTK 536
G ++ K FIEPT+ N D I EEIFGP+ II K +++ I N
Sbjct: 319 GSIDE-------KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKP 371
Query: 537 YGLASGIVTTNIDTANTFAHAINAGS-----AVVPQA----PFGGFKESGIGRELGKAAL 587
LA T N ++GS A++ A PFGG ESG GR GK +
Sbjct: 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF 431
Query: 588 DEYTELKTVTESPLRSY 604
D ++ K V RS
Sbjct: 432 DTFSHEKAVLR---RSL 445
Score = 64.7 bits (158), Expect = 6e-11
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 17/162 (10%)
Query: 216 VDAEMFTKVLNY-----IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREE 270
++ + F ++ N + + + GG ++ K FIEPT+ N D I EE
Sbjct: 294 LNKKHFQRLSNLLKDPRVAASIVHGGSIDE-------KKLFIEPTILLNPPLDSDIMTEE 346
Query: 271 IFGPVQTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVWIN--CYQ 328
IFGP+ II K +++ I N LA T N ++GSV N Q
Sbjct: 347 IFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQ 406
Query: 329 AVVPQAPFGGFKESGIGRELGKAALDEYTELKTVTESPLRSY 370
PFGG ESG GR GK + D ++ K V RS
Sbjct: 407 YACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR---RSL 445
Score = 40.9 bits (96), Expect = 0.002
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 122 IKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEV 181
+ + + GG ++ K FIEPT+ N D I EEIFGP+ II K +++
Sbjct: 311 VAASIVHGGSIDE-------KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDS 363
Query: 182 IERANDTKYGLASGIVTTN 200
I N LA T N
Sbjct: 364 IAFINSKPKPLAIYAFTNN 382
Score = 31.6 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAA 33
A+AAG V+LKP+E P T+ ++AA
Sbjct: 132 AIAAGNAVVLKPSELAPATSAFLAA 156
>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed.
Length = 1318
Score = 65.0 bits (159), Expect = 9e-11
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 422 VQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
+Q+D+ D ++ A+ A ++G+P S GP +DAE + +I++ +G
Sbjct: 925 LQDDVADRTLKMLRGAM---AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRP 981
Query: 479 ---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 533
G F+ PT+ D F + E+FGPV ++++ LDE+IE+ N
Sbjct: 982 VFQAARENSEDWQSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQIN 1039
Query: 534 DTKYGLASGIVTTNIDTANTFAHAI---NAGS---------AVVPQAPFGGFKESGIG 579
+ YGL G V T ID T A + G+ AVV PFGG SG G
Sbjct: 1040 ASGYGLTLG-VHTRID--ETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
Score = 60.0 bits (146), Expect = 3e-09
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 247 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVT 304
G F+ PT+ D F + E+FGPV ++++ LDE+IE+ N + YGL G V
Sbjct: 994 QSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLG-VH 1050
Query: 305 TNIDTANTFAHAI---NAGSVWI--NCYQAVVPQAPFGGFKESGIG 345
T ID T A + G++++ N AVV PFGG SG G
Sbjct: 1051 TRID--ETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
Score = 60.0 bits (146), Expect = 3e-09
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQAGFPDGVISVLPGYG 52
ALAAG VL KPAEQTPL A + +AG P GV+ +LPG G
Sbjct: 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRG 835
Score = 52.3 bits (126), Expect = 6e-07
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 75 VQEDIYD---TFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
+Q+D+ D ++ A+ A ++G+P S GP +DA + +I++ +G
Sbjct: 925 LQDDVADRTLKMLRGAM---AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRP 981
Query: 132 ---LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERAN 186
G F+ PT+ D F + E+FGPV ++++ LDE+IE+ N
Sbjct: 982 VFQAARENSEDWQSGTFVPPTLIE--LDSFDELKREVFGPVLHVVRYNRNQLDELIEQIN 1039
Query: 187 DTKYGLASGIVTTNIDTANTFAHAINAGSV 216
+ YGL G V T ID T A + V
Sbjct: 1040 ASGYGLTLG-VHTRID--ETIAQVTGSAHV 1066
>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C
dehydratase. The N-terminal domain of the MaoC
dehydratase, a monoamine oxidase regulatory protein.
Orthologs of MaoC include PaaZ (Escherichia coli) and
PaaN (Pseudomonas putida), which are putative
ring-opening enzymes of the aerobic phenylacetic acid
(PA) catabolic pathway. The C-terminal domain of MaoC
has sequence similarity to enoyl-CoA hydratase. Also
included in this CD is a novel Burkholderia xenovorans
LB400 ALDH of the aerobic benzoate oxidation (box)
pathway. This pathway involves first the synthesis of a
CoA thio-esterified aromatic acid, with subsequent
dihydroxylation and cleavage steps, yielding the CoA
thio-esterified aliphatic aldehyde,
3,4-dehydroadipyl-CoA semialdehyde, which is further
converted into its corresponding CoA acid by the
Burkholderia LB400 ALDH.
Length = 513
Score = 63.8 bits (156), Expect = 1e-10
Identities = 50/191 (26%), Positives = 74/191 (38%), Gaps = 26/191 (13%)
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKV---LNYIKSGVEQ 475
R +V E D ++ + A VGDP + V+ GP V E V + + + E
Sbjct: 297 RAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEV 356
Query: 476 ---GGKLEAGGKRKGDKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEVIE 530
G +KG F PT+ + D + E FGPV T++ + +L E IE
Sbjct: 357 VFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIE 416
Query: 531 RANDTKYGLASGIVTTNIDTANTFA----------HAINAGSA--------VVPQAPFGG 572
A + L + +VT + A +N SA +PQ GG
Sbjct: 417 LAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGG 476
Query: 573 FKESGIGRELG 583
+G G ELG
Sbjct: 477 PGRAGGGEELG 487
Score = 57.7 bits (140), Expect = 9e-09
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 12/150 (8%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGP-----QVDAVMFTKVLNYIKSGV 126
R +V E D ++ + A VGDP + V+ GP Q + V + + +
Sbjct: 297 RAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVR--AAVATLLAEA 354
Query: 127 EQ---GGKLEAGGKRKGDKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEV 181
E G +KG F PT+ + D + E FGPV T++ + +L E
Sbjct: 355 EVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEA 414
Query: 182 IERANDTKYGLASGIVTTNIDTANTFAHAI 211
IE A + L + +VT + A
Sbjct: 415 IELAARGRGSLVASVVTNDPAFARELVLGA 444
Score = 43.0 bits (102), Expect = 4e-04
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 247 DKGYFIEPTVF-SNVTDDFKIARE-EIFGPVQTIIKFKTLDEVIERANDTKYGLASGIVT 304
+KG F PT+ + D + E FGPV T++ + +L E IE A + L + +VT
Sbjct: 372 EKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVT 431
Query: 305 TNIDTANTFAHAINA--GSVWIN---------CYQAVVPQAPFGGFKESGIGRELG 349
+ A G + + + + +PQ GG +G G ELG
Sbjct: 432 NDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELG 487
Score = 36.9 bits (86), Expect = 0.033
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 5 KWGPALAAGCPVLLKPAEQTP-LTALYVAALTQQAGFPDGVISVLPG 50
K+ PAL AG PV++KPA T LT V + + P+G + ++ G
Sbjct: 164 KFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG 210
>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA
hydratase; Provisional.
Length = 675
Score = 53.3 bits (129), Expect = 3e-07
Identities = 51/194 (26%), Positives = 74/194 (38%), Gaps = 32/194 (16%)
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
R V + D ++ + A VGDP + V+ G E V + + + +
Sbjct: 301 RAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAE 359
Query: 479 LEAGGKRK-------GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDE 527
+ GG +KG F PT+ DD A E FGPV T++ + LDE
Sbjct: 360 IVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDE 417
Query: 528 VIERANDTKYGLASGIVTTNIDTANTFA----------HAINAGSAV--------VPQAP 569
IE A K L + +VT + + A +N SA +PQ
Sbjct: 418 AIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLV 477
Query: 570 FGGFKESGIGRELG 583
GG +G G ELG
Sbjct: 478 HGGPGRAGGGEELG 491
Score = 48.7 bits (117), Expect = 7e-06
Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V + D ++ + A VGDP + V+ G V + + + +
Sbjct: 301 RAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAE 359
Query: 132 LEAGGKRK-------GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDE 180
+ GG +KG F PT+ DD A E FGPV T++ + LDE
Sbjct: 360 IVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDE 417
Query: 181 VIERANDTKYGLASGIVTTNIDTANTFAHAINA 213
IE A K L + +VT + + A
Sbjct: 418 AIELAARGKGSLVASLVTADPEVARELVLGAAP 450
Score = 41.0 bits (97), Expect = 0.002
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 247 DKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 302
+KG F PT+ DD A E FGPV T++ + LDE IE A K L + +
Sbjct: 376 EKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASL 433
Query: 303 VTTNIDTANTFAHAINA 319
VT + + A
Sbjct: 434 VTADPEVARELVLGAAP 450
Score = 33.7 bits (78), Expect = 0.32
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MLAWKWGPALAAGCPVLLKPAEQT-PLTALYVAALTQQAGFPDGVISVLPG 50
ML K PA AG P ++KPA T LT V + + P+G + ++ G
Sbjct: 165 MLE-KLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICG 214
>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN.
This enzyme is proposed to act in the ring-opening step
of phenylacetic acid degradation which follows ligation
of the acid with coenzyme A (by PaaF) and hydroxylation
by a multicomponent non-heme iron hydroxylase complex
(PaaGHIJK). Gene symbols have been standardized in. This
enzyme is related to aldehyde dehydrogenases and has
domains which are members of the pfam00171 and pfam01575
families. This family includes paaN genes from
Pseudomonas, Sinorhizobium, Rhodopseudomonas,
Escherichia, Deinococcus and Corynebacterium. Another
homology family (TIGR02288) includes several other
species.
Length = 663
Score = 52.5 bits (126), Expect = 5e-07
Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 18/183 (9%)
Query: 419 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGK 478
R V + + + +K + A +GDP ++ V GP V E V + + + G +
Sbjct: 297 RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAE 356
Query: 479 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 538
+ GG + D +F + + + E FGPV T + E A
Sbjct: 357 VRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416
Query: 539 LASGIVTTNIDTANTFA----------HAINAGSAV--------VPQAPFGGFKESGIGR 580
L + + T++ + A F H +N A +P+ GG +G G
Sbjct: 417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGE 476
Query: 581 ELG 583
ELG
Sbjct: 477 ELG 479
Score = 45.2 bits (107), Expect = 8e-05
Identities = 29/140 (20%), Positives = 54/140 (38%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R V + + + +K + A +GDP ++ V GP V V + + + G +
Sbjct: 297 RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAE 356
Query: 132 LEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERANDTKYG 191
+ GG + D +F + + + E FGPV T + E A
Sbjct: 357 VRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416
Query: 192 LASGIVTTNIDTANTFAHAI 211
L + + T++ + A F +
Sbjct: 417 LVATLATSDPEEARQFILGL 436
Score = 31.7 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 5 KWGPALAAGCPVLLKPAEQTP-LTALYVAALTQQAGFPDGVISVLPG 50
K+ PA AG P L KPA T + V + + P+G + ++ G
Sbjct: 164 KFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG 210
Score = 29.0 bits (65), Expect = 9.4
Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 11/145 (7%)
Query: 216 VDAEMFTKVLNYIKSGVEQGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAREEIFGPV 275
V E V + + + G ++ GG + D +F + + + E FGPV
Sbjct: 335 VSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPV 394
Query: 276 QTIIKFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINA--GSVWI--------- 324
T + E A L + + T++ + A F + G + I
Sbjct: 395 ATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAES 454
Query: 325 NCYQAVVPQAPFGGFKESGIGRELG 349
+ + +P+ GG +G G ELG
Sbjct: 455 TGHGSPLPRLLHGGPGRAGGGEELG 479
>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional.
Length = 521
Score = 52.0 bits (125), Expect = 6e-07
Identities = 59/258 (22%), Positives = 91/258 (35%), Gaps = 45/258 (17%)
Query: 386 RVSLELGGKSPLVICADADVDMAYYYCFV--------------C-AGSRTYVQEDIYDTF 430
RV++E + ++ DA + FV C A R +V E +YD
Sbjct: 253 RVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAV 312
Query: 431 VKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRK---- 486
+ + A VG+P + V+ GP V V + + Q L GG
Sbjct: 313 AEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDA 372
Query: 487 -GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVIERANDTKYGLAS 541
+ PT+ D A E+FGPV T++ ++ + A + L +
Sbjct: 373 DPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVA 430
Query: 542 GIVTTNIDTANTFA----------HAINAGSA--------VVPQAPFGGFKESGIGRELG 583
+ + + A H I+ A V+PQ+ GG +G G ELG
Sbjct: 431 SVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELG 490
Query: 584 KA-ALDEYTELKTVTESP 600
AL Y V SP
Sbjct: 491 GLRALAFYHRRSAVQASP 508
Score = 45.1 bits (107), Expect = 8e-05
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Query: 72 RTYVQEDIYDTFVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVEQGGK 131
R +V E +YD + + A VG+P + V+ GP V V + + Q
Sbjct: 301 RIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEV 360
Query: 132 LEAGGKRK-----GDKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVI 182
L GG + PT+ D A E+FGPV T++ ++ +
Sbjct: 361 LFDGGGFALVDADPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVATLLPYRDAAHAL 418
Query: 183 ERA 185
A
Sbjct: 419 ALA 421
Score = 36.2 bits (84), Expect = 0.043
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 3 AW----KWGPALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPG 50
AW K PAL AG PV++KPA T + AG P G +SV+ G
Sbjct: 162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG 214
Score = 28.9 bits (65), Expect = 9.6
Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 18/136 (13%)
Query: 247 DKGYFIEPTVFSNVTDDFKIARE----EIFGPVQTIIKFKTLDEVIERANDTKYGLASGI 302
+ PT+ D A E+FGPV T++ ++ + A + L + +
Sbjct: 375 AVAACVGPTLL--GASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASV 432
Query: 303 VTTNIDTANTFAHAINA--GSVWI--NCYQA-------VVPQAPFGGFKESGIGRELGKA 351
+ + A + G V + A V+PQ+ GG +G G ELG
Sbjct: 433 YSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGL 492
Query: 352 -ALDEYTELKTVTESP 366
AL Y V SP
Sbjct: 493 RALAFYHRRSAVQASP 508
>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent
alpha-ketoglutaric semialdehyde dehydrogenases and plant
delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH
family 12-like. ALDH subfamily which includes the
NAD(P)+-dependent, alpha-ketoglutaric semialdehyde
dehydrogenases (KGSADH, EC 1.2.1.26); plant
delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH,
EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of
the MaoC (monoamine oxidase C) dehydratase regulatory
protein; and orthologs of MaoC, PaaZ and PaaN, which are
putative ring-opening enzymes of the aerobic
phenylacetic acid catabolic pathway.
Length = 442
Score = 43.8 bits (103), Expect = 2e-04
Identities = 47/197 (23%), Positives = 71/197 (36%), Gaps = 21/197 (10%)
Query: 369 SYTSHSIMAAAAASNLK--RVSLELGGKSPLVICADAD---------VDMAYYYC--FVC 415
+T S +A A + K R+ LEL G + V+ DA V
Sbjct: 184 LFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCT 243
Query: 416 AGSRTYVQEDIYDT-FVKKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVE 474
A S +V E+ T V+K A RK+ D VQ A M + N + S +
Sbjct: 244 AQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQT-FTTLA-MIAHMENLLGSVLL 301
Query: 475 QGGKLEAGGKRKGDKGYFIEPTVFSNVTDDFKIAR---EEIFGPVQTIIKFKTLDE--VI 529
GK G + +F + + K EEIFGP ++++K V+
Sbjct: 302 FSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVL 361
Query: 530 ERANDTKYGLASGIVTT 546
E L + I +
Sbjct: 362 ELLERMHGSLTAAIYSN 378
Score = 40.7 bits (95), Expect = 0.002
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 8 PALAAGCPVLLKPAEQTPLTALYVAALTQQAG-FPDGVISVLPGYGPMSA 56
ALA G PV++KP + + L AG P ++++ G G
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQ 172
>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde
Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA)
Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the
NAD(P)+-dependent conversion of KGSA to
alpha-ketoglutarate. This CD contains such sequences as
those seen in Azospirillum brasilense, KGSADH-II
(D-glucarate/D-galactarate-inducible) and KGSADH-III
(hydroxy-L-proline-inducible). Both show similar high
substrate specificity for KGSA and different coenzyme
specificity; KGSADH-II is NAD+-dependent and KGSADH-III
is NADP+-dependent. Also included in this CD is the
NADP(+)-dependent aldehyde dehydrogenase from Vibrio
harveyi which catalyzes the oxidation of long-chain
aliphatic aldehydes to acids.
Length = 454
Score = 40.6 bits (96), Expect = 0.002
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 9 ALAAGCPVLLKPAEQTPLTALYVAALTQQA----GFPDGVISVLPGYGP 53
ALAAGCPV++K P T+ VA + A G P GV S+L G G
Sbjct: 131 ALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGR 179
Score = 29.0 bits (66), Expect = 8.9
Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 18/108 (16%)
Query: 87 AVEKAAARKVGDPFDKSVQQGPQVDAVMFTK-VLNYIKSGVEQ----GGKLEAGGKRKGD 141
A A A + M T + + GVE G G +
Sbjct: 275 AFIAALAEALAA----------APAQTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAAE 324
Query: 142 KGYFIEPTVFSNVTDDF---KIAREEIFGPVQTIIKFKTLDEVIERAN 186
G PT+F F +EE+FGP ++++ E++ A
Sbjct: 325 GGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAE 372
>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate
dehydrogenase, ALDH family 12.
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH,
EC=1.5.1.12), family 12: a proline catabolic enzyme of
the aldehyde dehydrogenase (ALDH) protein superfamily.
P5CDH is a mitochondrial enzyme involved in proline
degradation and catalyzes the NAD + -dependent
conversion of P5C to glutamate. The P5CDH, ALDH12A1
gene, in Arabidopsis, has been identified as an
osmotic-stress-inducible ALDH gene. This CD contains
both Viridiplantae and Alveolata P5CDH sequences.
Length = 489
Score = 39.0 bits (91), Expect = 0.006
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 50/252 (19%)
Query: 370 YTSHSIMAAAAASNLK-RVSLELGGKSPLVICAD-ADVDMAYYYC----FVCAGSRTYVQ 423
+T S +A A L +V LE G ++ D +DVD + C + C+G + Q
Sbjct: 226 FTGSSKVAERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQ 285
Query: 424 EDIY-------DTFVKKAVEKAAARKVGDPFDKSVQQGP--QVDAEMFTKVLNYIKSGVE 474
++ + K A RK+ D + GP E ++L+++ +
Sbjct: 286 SILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWTTE---RILDHVDKLLA 337
Query: 475 -QGGKLEAGGKRKGDKGY-----FIEPT-VF-----SNVTDDFKIAREEIFGPVQTIIKF 522
G K+ GGK + EPT VF + ++F++ E+FGP Q + ++
Sbjct: 338 IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEY 397
Query: 523 K--TLDEVIERANDTKYGLASGIVTTNI--------DTANTFAHA-INAGSAVVPQ---- 567
K L V+E L + +V+ +I +T N +A I A + PQ
Sbjct: 398 KDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWF 457
Query: 568 APFGGFKESGIG 579
P G + +GIG
Sbjct: 458 GPAGDPRGAGIG 469
Score = 35.5 bits (82), Expect = 0.080
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 83 FVKKAVEKAAARKVGDPFDKSVQQGPQVDAVMFTKVLNYIKSGVE-QGGKLEAGGKRKGD 141
+ K A RK+ D + GP V ++L+++ + G K+ GGK +
Sbjct: 299 ILDKLKALAEQRKLED-----LTIGP-VLTWTTERILDHVDKLLAIPGAKVLFGGKPLTN 352
Query: 142 KGY-----FIEPT-VF-----SNVTDDFKIAREEIFGPVQTIIKFK--TLDEVIERANDT 188
EPT VF + ++F++ E+FGP Q + ++K L V+E
Sbjct: 353 HSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERM 412
Query: 189 KYGLASGIVTTNIDTAN-TFAHAIN 212
L + +V+ +I A+ +N
Sbjct: 413 HAHLTAAVVSNDIRFLQEVLANTVN 437
Score = 33.6 bits (77), Expect = 0.29
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 223 KVLNYIKSGVE-QGGKLEAGGKRKGDKGY-----FIEPT-VF-----SNVTDDFKIAREE 270
++L+++ + G K+ GGK + EPT VF + ++F++ E
Sbjct: 327 RILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTE 386
Query: 271 IFGPVQTIIKFK--TLDEVIERANDTKYGLASGIVTTNIDTAN-TFAHAIN 318
+FGP Q + ++K L V+E L + +V+ +I A+ +N
Sbjct: 387 VFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVN 437
>gnl|CDD|223721 COG0648, Nfo, Endonuclease IV [DNA replication, recombination, and
repair].
Length = 280
Score = 33.0 bits (76), Expect = 0.36
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 174 KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINAGSVDAEMFTKVLNYIKS 230
+F L E+I+ + + I IDT + A + E F KVLN
Sbjct: 153 QFGELAEIIDLIEEKE-----RIGVC-IDTCHA--FAAGYDIITEEDFEKVLNEFDK 201
>gnl|CDD|143398 cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase
(GPR), aldehyde dehydrogenase families 18 and 19.
Gamma-glutamyl phosphate reductase (GPR), a L-proline
biosynthetic pathway (PBP) enzyme that catalyzes the
NADPH dependent reduction of L-gamma-glutamyl
5-phosphate into L-glutamate 5-semialdehyde and
phosphate. The glutamate route of the PBP involves two
enzymatic steps catalyzed by gamma-glutamyl kinase (GK,
EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are
fused into the bifunctional enzyme, ProA or
delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in
plants and animals, whereas they are separate enzymes in
bacteria and yeast. In humans, the P5CS (ALDH18A1), an
inner mitochondrial membrane enzyme, is essential to the
de novo synthesis of the amino acids proline and
arginine. Tomato (Lycopersicon esculentum) has both the
prokaryotic-like polycistronic operons encoding GK and
GPR (PRO1, ALDH19) and the full-length, bifunctional
P5CS (PRO2, ALDH18B1).
Length = 406
Score = 33.2 bits (77), Expect = 0.37
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 278 IIKFKT---LDEVIERANDTKYGLASG----IVTTNIDTANTFAHAINAGSVWINC 326
I+ K LDE I N +YG SG IVT N +TA F +++ +V++N
Sbjct: 311 ILAVKVVDSLDEAIAHIN--RYG--SGHTEAIVTENYETAERFLREVDSAAVYVNA 362
>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase
(ACDH), ALDH family 20-like. Coenzyme A acylating
aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and
CoA-dependent acetaldehyde dehydrogenase, functions as a
single enzyme (such as the Ethanolamine utilization
protein, EutE, in Salmonella typhimurium) or as part of
a multifunctional enzyme to convert acetaldehyde into
acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase
includes the functional domains, alcohol dehydrogenase
(ADH), ACDH, and pyruvate-formate-lyase deactivase; and
the Entamoeba histolytica aldehyde-alcohol dehydrogenase
2 (ALDH20A1) includes the functional domains ADH and
ACDH and may be critical enzymes in the fermentative
pathway.
Length = 436
Score = 31.7 bits (73), Expect = 1.0
Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 52/210 (24%)
Query: 393 GKSPLVICADADVDMAYY---------YCFVCAGSRT-YVQEDIYDTFV----------- 431
G P I AD+ A +CA ++ V ++IYD
Sbjct: 207 GNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFL 266
Query: 432 ----KKAVEKAAARKVGDPFDKSVQQGPQVDAEMFTKVLNYIKSGVEQGGKLEAGGKRKG 487
K+ +EKA G V + Q AE+ AG +
Sbjct: 267 NEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAEL-------------------AGIEVPE 307
Query: 488 DKGYFIEPTVFSNVTDDFKIAREEIFGPVQTIIKFKTLDEVIERAND-TKYGLA---SGI 543
D + + V + ++RE++ PV + + +E +E+A + +YG A + I
Sbjct: 308 DTKVLVAE--ETGVGPEEPLSREKLS-PVLAFYRAEDFEEALEKARELLEYGGAGHTAVI 364
Query: 544 VTTNIDTANTFAHAINAGSAVVPQ-APFGG 572
+ + + FA + +V + GG
Sbjct: 365 HSNDEEVIEEFALRMPVSRILVNTPSSLGG 394
>gnl|CDD|223093 COG0014, ProA, Gamma-glutamyl phosphate reductase [Amino acid
transport and metabolism].
Length = 417
Score = 31.8 bits (73), Expect = 1.2
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 278 IIKFKT---LDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAINAGSVWINC 326
I+ K LDE I N YG + I+T + A F + +++ +V++N
Sbjct: 317 ILAVKVVDSLDEAIAHIN--TYGSGHSDAIITEDYANAERFVNEVDSAAVYVNA 368
>gnl|CDD|234685 PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.
Length = 417
Score = 31.6 bits (73), Expect = 1.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 284 LDEVIERANDTKYGLASG----IVTTNIDTANTFAHAINAGSVWINC 326
LDE I N +YG SG IVT + A F + +++ +V++N
Sbjct: 326 LDEAIAHIN--RYG--SGHTEAIVTEDYAAAERFLNEVDSAAVYVNA 368
>gnl|CDD|237986 cd00019, AP2Ec, AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of D-arabino-6-hexulose
3-phosphate to D-fructose 6-phosphate, via cleaving the
phosphoesterbond with the sugar. .
Length = 279
Score = 30.8 bits (70), Expect = 2.1
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 155 TDDFKIAREEIFGPVQTII-KFKTLDEVIERANDTKYGLASGIVTTNIDTANTFAHAINA 213
T IA E + G I F+ L E+I+ + V IDT + FA +
Sbjct: 134 TKGVVIALETMAGQGNEIGSSFEELKEIIDLIKEKPR------VGVCIDTCHIFAAGYDI 187
Query: 214 GSVDAEMFTKVLNYIKSGV 232
+V+ F KVL +
Sbjct: 188 STVEG--FEKVLEEFDKVI 204
>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like.
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an
NAD+ and CoA-dependent acetaldehyde dehydrogenase,
acetylating (EC=1.2.1.10), converts acetaldehyde into
acetyl-CoA. This CD is limited to such monofunctional
enzymes as the Ethanolamine utilization protein, EutE,
in Salmonella typhimurium. Mutations in eutE abolish
the ability to utilize ethanolamine as a carbon source.
Length = 429
Score = 30.3 bits (69), Expect = 2.9
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 161 AREEIFGPVQTIIKFKTLDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAIN 212
EE P+ +++ K DE IE A + ++G + I + N++ A A+
Sbjct: 327 VVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380
Score = 30.3 bits (69), Expect = 2.9
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 267 AREEIFGPVQTIIKFKTLDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAIN 318
EE P+ +++ K DE IE A + ++G + I + N++ A A+
Sbjct: 327 VVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380
Score = 30.3 bits (69), Expect = 2.9
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 508 AREEIFGPVQTIIKFKTLDEVIERANDTKYGL--ASGIVTTNIDTANTFAHAIN 559
EE P+ +++ K DE IE A + ++G + I + N++ A A+
Sbjct: 327 VVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380
>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of
homologous glycosyltransferases involved in the final
stages of the biosynthesis of antibiotics vancomycin and
related chloroeremomycin. Gtfs transfer sugar moieties
from an activated NDP-sugar donor to the oxidatively
cross-linked heptapeptide core of vancomycin group
antibiotics. The core structure is important for the
bioactivity of the antibiotics.
Length = 401
Score = 29.6 bits (67), Expect = 5.0
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 26/100 (26%)
Query: 310 ANTFAHAINAGSVWINCYQAVVPQA---PFGG--FKESGIGRELGKAALDEYTE-----L 359
A T A A+ AG Q VVP PF E G G L L E L
Sbjct: 314 AGTTAAALRAG-----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA--ERLAAAL 366
Query: 360 KTVTESPLRSYTSHSIMAAAAASNLKRVSLELGGKSPLVI 399
+ + + P AA+ L+R+ E G S +
Sbjct: 367 RRLLDPP---------SRRRAAALLRRIREEDGVPSAADV 397
>gnl|CDD|236388 PRK09133, PRK09133, hypothetical protein; Provisional.
Length = 472
Score = 29.2 bits (66), Expect = 7.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 23 QTPLTALYVAALTQQAGFPDGVISVLPGYG 52
T A +AA + AGF D I V Y
Sbjct: 57 STTPAAEAMAARLKAAGFADADIEVTGPYP 86
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.316 0.134 0.386
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 31,226,203
Number of extensions: 3144403
Number of successful extensions: 3578
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3023
Number of HSP's successfully gapped: 465
Length of query: 605
Length of database: 10,937,602
Length adjustment: 103
Effective length of query: 502
Effective length of database: 6,369,140
Effective search space: 3197308280
Effective search space used: 3197308280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (27.7 bits)