RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10990
(486 letters)
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 194 bits (495), Expect = 3e-60
Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 30/250 (12%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TTIVG F +GVV+ ADTR+T IVA+KNC K+H ++ I+C GAGTAADT+ T LI
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIG 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
S +EL L T + PRV++A ++L+Q LF+Y
Sbjct: 61 SNIELHSLYTSREPRVVSALQMLKQHLFKY-----------------------------Q 91
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
GH+ A L++ GVD TG+HLF+I+ HGS+D + ++GSGSLAAM+V ES+WK ++T+EE
Sbjct: 92 GHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEA 151
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIANVKGKKDGDYRFKRGTTA 464
KL DAI AG++NDLGSGSN+D+CV++ EYLR Y NV+ +K Y+F RGTTA
Sbjct: 152 IKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTA 211
Query: 465 LLSTQRIPIV 474
+L + I
Sbjct: 212 VLKESIVNIC 221
Score = 56.3 bits (135), Expect = 1e-09
Identities = 50/190 (26%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSY-SDLIAVTVSSIGFQKNAFLASKG 215
TTIVG F +GVV+ ADTR+T IVA+KNC L S I + A G
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIG 60
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
+ + + A ++ + + ++ + G
Sbjct: 61 SNIELHSLYTSREPRVVSA-------------LQMLKQHLFKYQGHIGAYLIVAGVDPTG 107
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFND 335
+ S L+ G + L +EE KL DAI AG++ND
Sbjct: 108 SHLFSIHAHGSTDVGYYLSLGS-GSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWND 166
Query: 336 LGSGSNIDLC 345
LGSGSN+D+C
Sbjct: 167 LGSGSNVDVC 176
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 220
Score = 191 bits (487), Expect = 5e-59
Identities = 142/248 (57%), Positives = 184/248 (74%), Gaps = 29/248 (11%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TTI G ++ DG+VLGADTRAT+ +VA+KNC KIH+++ NIYCCGAGTAADT +TT LI+
Sbjct: 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLIS 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
S LEL L+TG++PRV+TANR+L+QMLFRY+
Sbjct: 61 SNLELHSLSTGRLPRVVTANRMLKQMLFRYR----------------------------- 91
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
G++ AALVLGGVD TG HL++IYPHGS+D +P+ TMGSGSLAAM+VFE ++P+M EEE
Sbjct: 92 GYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEA 151
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKDGDYRFKRGTTAL 465
K LV +AIAAG+FNDLGSGSNIDLCVI KN +++LRPY + N KG + G YR ++GTTA+
Sbjct: 152 KNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAV 211
Query: 466 LSTQRIPI 473
L+ + P+
Sbjct: 212 LTEKITPL 219
Score = 63.6 bits (154), Expect = 4e-12
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 17/191 (8%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSY-SDLIAVTVSSIGFQKNAFLASKG 215
TTI G ++ DG+VLGADTRAT+ +VA+KNC + + S I + +
Sbjct: 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLIS 60
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
+ + + + A + ++ + + Y+ + G
Sbjct: 61 SNLELHSLSTGRLPRVVTA-------------NRMLKQMLFRYRGYIGAALVLGGVDVTG 107
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQML-FRYQEEECKKLVRDAIAAGVFN 334
+ S +L + G + A + +EEE K LV +AIAAG+FN
Sbjct: 108 PHLYSIYPHGSTDKLPYVTMGS--GSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFN 165
Query: 335 DLGSGSNIDLC 345
DLGSGSNIDLC
Sbjct: 166 DLGSGSNIDLC 176
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 202
Score = 154 bits (391), Expect = 4e-45
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TTI+ F GVVLGAD+R T + +A + K+ + I+CC +G+AADTQ D +
Sbjct: 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVT 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
QL + + P V TA L ++M +RY+
Sbjct: 61 YQLGFHSIELNEPPLVHTAASLFKEMCYRYR----------------------------- 91
Query: 346 GHVSAALVLGGVDD-TGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEE 404
+ A +++ G D G ++++ G F GSGS ++ ++ MT+EE
Sbjct: 92 EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEE 151
Query: 405 CKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVE--YLRPYEIAN 447
C + +A+A + D SG I L I ++GVE L +I
Sbjct: 152 CLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPK 196
Score = 55.9 bits (134), Expect = 9e-10
Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 28/197 (14%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAFLAS 213
TTI+ F GVVLGAD+R T + +A + + + S+ Q A +
Sbjct: 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVT 60
Query: 214 KGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGT 273
+ +V A +++ Y + G
Sbjct: 61 YQLGFHSIELNEPPLVHT--------------------AASLFKEMCYRYREDLMAGIII 100
Query: 274 AADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQML-----FRYQEEECKKLVRDAI 328
A + S + + + + + +EEC + +A+
Sbjct: 101 AGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANAL 160
Query: 329 AAGVFNDLGSGSNIDLC 345
A + D SG I L
Sbjct: 161 ALAMERDGSSGGVIRLA 177
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 212
Score = 154 bits (391), Expect = 4e-45
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TT + F G+++ D+RAT VA + +++ + + AG AAD Q +
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLG 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
SQ L +L + V A+++L ++++Y+
Sbjct: 61 SQCRLHELREKERISVAAASKILSNLVYQYKG---------------------------A 93
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
G ++ G G ++ + G+ +GSG A V +SN+K +++ E+
Sbjct: 94 GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDA 153
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGK 451
L + +I A D SG +++L + ++G Y +++ + K
Sbjct: 154 LYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWK 199
Score = 56.7 bits (136), Expect = 7e-10
Identities = 26/192 (13%), Positives = 58/192 (30%), Gaps = 17/192 (8%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSY-SDLIAVTVSSIGFQKNAFLASKG 215
TT + F G+++ D+RAT VA + + + + T++
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAG------------- 47
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
+ T + + + + + ++ G
Sbjct: 48 -GAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTR 106
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQ--EEECKKLVRDAIAAGVF 333
T + S LK + + T + +++ E+ L + +I A
Sbjct: 107 KEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAH 166
Query: 334 NDLGSGSNIDLC 345
D SG +++L
Sbjct: 167 RDAYSGGSVNLY 178
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 205
Score = 149 bits (376), Expect = 5e-43
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 223 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTD 282
G +I+ F DGV+LGAD+R T +A + K+ + I+CC +G+AADTQ D
Sbjct: 7 SLGASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIAD 66
Query: 283 LIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNI 342
++ LEL G P TA + +++ + +
Sbjct: 67 IVQYHLELYTSQYGT-PSTETAASVFKELCYENK-------------------------- 99
Query: 343 DLCGHVSAALVLGGVDDT-GAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMT 401
+++A +++ G DD ++ I GS +P+ GSGS + N++ NM+
Sbjct: 100 ---DNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMS 156
Query: 402 EEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYE 444
+EE ++ +++ + D SG I + V+ GVE L Y
Sbjct: 157 KEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYP 199
Score = 65.5 bits (159), Expect = 6e-13
Identities = 37/198 (18%), Positives = 62/198 (31%), Gaps = 25/198 (12%)
Query: 154 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFLAS 213
G +I+ F DGV+LGAD+R T +A + K +
Sbjct: 7 SLGASIMAVTFKDGVILGADSRTTTGAYIANRVT------------------DKLTRVHD 48
Query: 214 KGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGT 273
K + + T + I + L T T A +++ Y K+ G
Sbjct: 49 KIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIV 108
Query: 274 AADTQ------VTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDA 327
A T L S +L G I + +EE ++ +
Sbjct: 109 AGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGY-CDKNFRENMSKEETVDFIKHS 167
Query: 328 IAAGVFNDLGSGSNIDLC 345
++ + D SG I +
Sbjct: 168 LSQAIKWDGSSGGVIRMV 185
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 201
Score = 149 bits (376), Expect = 6e-43
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 28/229 (12%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TT + F GV++ AD+RAT +A + +K+ + + AG AAD L+A
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLA 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
Q + +L + V A++LL M+++Y+
Sbjct: 61 RQCRIYELRNKERISVAAASKLLANMVYQYKGMGL------------------------- 95
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
S ++ G D G L+ + G+ + ++GSGS+ A V + + ++ E+
Sbjct: 96 ---SMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 152
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKDG 454
L R AI + D SG ++L ++++G + +A++ K G
Sbjct: 153 YDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSG 201
Score = 52.5 bits (125), Expect = 2e-08
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 18/192 (9%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCY-LLSYSDLIAVTVSSIGFQKNAFLASKG 215
TT + F GV++ AD+RAT +A + ++ + + T++
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAG------------- 47
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
+ + + + + M ++ G
Sbjct: 48 -GAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 106
Query: 276 D--TQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVF 333
D +++ + G + R + + E+ L R AI +
Sbjct: 107 RGPGLYYVDSEGNRISGATFSVGSGSVYAY-GVMDRGYSYDLEVEQAYDLARRAIYQATY 165
Query: 334 NDLGSGSNIDLC 345
D SG ++L
Sbjct: 166 RDAYSGGAVNLY 177
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 234
Score = 148 bits (374), Expect = 3e-42
Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 22/229 (9%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+T +G ++GV L + R T ++ + +KI + +I C +G AD +
Sbjct: 23 AIKLGSTAIGIQTSEGVCLAVEKRITSP-LMEPSSIEKIVEIDAHIGCAMSGLIADAKTL 81
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
D + + + V + + + + ++ EE+ G
Sbjct: 82 IDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAM-------SRPFG--- 131
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
AL+ GGVD+ G LF++ P G+ +GS S A S + + +M
Sbjct: 132 ---------VALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQELYHKSM 182
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIANV 448
T +E K + V + + +NI+L ++ E+ V
Sbjct: 183 TLKEAIKSSLIILKQ-VMEEKLNATNIELATVQPGQNFHMFTKEELEEV 230
Score = 49.6 bits (118), Expect = 2e-07
Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 9/196 (4%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVS-SIGFQKNAF 210
A K G+T +G ++GV L + R T + ++ I +S I K
Sbjct: 23 AIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLI 82
Query: 211 LASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCG 270
++ + T+ V ++ A+ + + G
Sbjct: 83 DKARVETQNHWFTYNETMTVESVTQAV---SNLALQFGEEDADPGAMSRPFGVALL-FGG 138
Query: 271 AGTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFR-YQEEECKKLVRDAIA 329
D + ++ G A L+++ + +E K +
Sbjct: 139 VDEKGPQLFHMDPSGTFVQCDARAIGS--ASEGAQSSLQELYHKSMTLKEAIKSSLIILK 196
Query: 330 AGVFNDLGSGSNIDLC 345
V + + +NI+L
Sbjct: 197 Q-VMEEKLNATNIELA 211
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 198
Score = 144 bits (364), Expect = 2e-41
Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 28/222 (12%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
I+G D V+L + T V + + K ++ + AG A DT + I
Sbjct: 2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQ 61
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
+ ++L + + +RQ L +
Sbjct: 62 ANIQLYSIREDYELSPQAVSSFVRQELAKSIRS--------------------------R 95
Query: 346 GHVSAALVLGGVDD--TGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEE 403
+++GG D L+ I G+ +P+ G S+ + +++P+MT E
Sbjct: 96 RPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTE 155
Query: 404 ECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEI 445
E L++ + + + ++ K+G+ + ++
Sbjct: 156 EGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQA 197
Score = 50.2 bits (119), Expect = 8e-08
Identities = 21/192 (10%), Positives = 47/192 (24%), Gaps = 14/192 (7%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSY-SDLIAVTVSSIGFQKNAFLASKG 215
I+G D V+L + T V + + S ++ + F
Sbjct: 2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQ 61
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
+ + L ++ K+ + N+ G
Sbjct: 62 ANIQLYSIR----------EDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKK 111
Query: 276 DTQV--TTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVF 333
+ D + +++E L T + L EE L++ +
Sbjct: 112 NKPELYQIDYLGTKVE-LPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEK 170
Query: 334 NDLGSGSNIDLC 345
+ +
Sbjct: 171 RMPMDFKGVIVK 182
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 202
Score = 139 bits (350), Expect = 3e-39
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TT VG + DGVV+ + RAT +A K +KI+ +A + AG+ D Q +I
Sbjct: 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIK 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
+ L ++ + P V L +L Y+
Sbjct: 61 IEANLYEIRRERKPTVRAIATLTSNLLNSYR----------------------------Y 92
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSS-DTVPFCTMGSGSLAAMSVFESNWKPNMTEEE 404
L++GG+D G +++I P G + + GSGSL A V E + P + +E
Sbjct: 93 FPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDE 152
Query: 405 CKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANV 448
+L AI + + D SG ID+ I ++ P E+ +
Sbjct: 153 AVELAVRAIYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQI 196
Score = 52.5 bits (125), Expect = 2e-08
Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 17/192 (8%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAFLAS 213
TT VG + DGVV+ + RAT +A K Y ++ + S Q A +
Sbjct: 1 TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIK 60
Query: 214 KGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGT 273
+ R+ V AI T + + Y+ + + G +
Sbjct: 61 IEANLYEIRRERKPTVRAIA-------------TLTSNLLNSYRYFPYLVQLL-IGGIDS 106
Query: 274 AADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVF 333
+ + D I +E + + L + +E +L AI + +
Sbjct: 107 EGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMK 166
Query: 334 NDLGSGSNIDLC 345
D SG ID+
Sbjct: 167 RDSASGDGIDVV 178
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 217
Score = 138 bits (349), Expect = 5e-39
Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 29/228 (12%)
Query: 223 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTD 282
TGT+++G F GVV+ AD + ++ +N +I + + +G AD Q
Sbjct: 6 VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQ 65
Query: 283 LIASQLELL-KLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSN 341
++ + L G + L + ++ + +
Sbjct: 66 VLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSK----------------------- 102
Query: 342 IDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFES--NWKPN 399
+ +V+GG D + L + G + P G G+ A + +P
Sbjct: 103 ---MNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPV 159
Query: 400 MTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIAN 447
+++ E + LV + + D S + + + GVE P
Sbjct: 160 LSQTEARDLVERCMRVLYYRDARSYNRFQTATVTEKGVEIEGPLSTET 207
Score = 55.9 bits (134), Expect = 1e-09
Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 15/196 (7%)
Query: 154 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAF 210
TGT+++G F GVV+ AD + ++ +N ++ S ++ + FQ
Sbjct: 6 VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQ 65
Query: 211 LASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCG 270
+ + G + + T K++ + + G
Sbjct: 66 VLGQMVIDEELLGDGHSYSPRAIHSWL-----------TRAMYSRRSKMNPLWNTMVIGG 114
Query: 271 AGTAADTQVTTDLIASQLELLKLNTG-KIPRVITANRLLRQMLFRYQEEECKKLVRDAIA 329
D++ E L TG R + + + E + LV +
Sbjct: 115 YADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMR 174
Query: 330 AGVFNDLGSGSNIDLC 345
+ D S +
Sbjct: 175 VLYYRDARSYNRFQTA 190
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 138 bits (348), Expect = 1e-38
Identities = 34/239 (14%), Positives = 83/239 (34%), Gaps = 38/239 (15%)
Query: 223 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTD 282
TGT+++ + +GV++ AD + +++ +++ + N +G +D Q
Sbjct: 6 VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIER 65
Query: 283 LIASQLELLKLN-----TGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLG 337
L+ + + + L ++++ + +
Sbjct: 66 LLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSK------------------- 106
Query: 338 SGSNIDLCGHVSAALVLGGVDDTGAHLFNIYPHGS-SDTVPFCTMGSGSLAAMSVFESNW 396
+ A+++ GV G + + P G G+ A +
Sbjct: 107 -------MNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVV 159
Query: 397 K-----PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIANVK 449
P T + ++ + +A+ + D S N L +I KN G+ + + ++ N+K
Sbjct: 160 DRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTGLTFKKNLQVENMK 218
Score = 56.3 bits (135), Expect = 1e-09
Identities = 23/206 (11%), Positives = 58/206 (28%), Gaps = 27/206 (13%)
Query: 154 KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNC-YLLSYSDLIAVTVSSIG-------- 204
TGT+++ + +GV++ AD + +++ L+ D V +S
Sbjct: 6 VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIER 65
Query: 205 -FQKNAFLASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMA 263
+ + A + + T++ ++ +
Sbjct: 66 LLKDLVTENAYDNPLADAEEALEPSYIFEYL-------------ATVMYQRRSKMNPLWN 112
Query: 264 KNIYCCGAGTAADTQVTTDLIASQLELLKLNTGK----IPRVITANRLLRQMLFRYQEEE 319
I +L+ L TG ++ + + +
Sbjct: 113 AIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQV 172
Query: 320 CKKLVRDAIAAGVFNDLGSGSNIDLC 345
++ + +A+ + D S N L
Sbjct: 173 AEEAIVNAMRVLYYRDARSSRNFSLA 198
>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 250
Score = 137 bits (345), Expect = 5e-38
Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 33/246 (13%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G T +G +GVV+ + +++ ++ + K+ + +I +G D +V
Sbjct: 27 AVKQGVTSLGIKATNGVVIATEKKSSSPLAMS-ETLSKVSLLTPDIGAVYSGMGPDYRVL 85
Query: 281 TDLIA--SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGS 338
D + ++ P + + + + M Q
Sbjct: 86 VDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQS--------------------- 124
Query: 339 GSNIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKP 398
+ + L+ G + G L+ + P GS +G GS+AA + E W
Sbjct: 125 ---GGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND 181
Query: 399 NMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKDGDYRF 458
+ E+ + + V + +G I+L +I + L I KG + F
Sbjct: 182 ELELEDAIHIALLTLKESVEGEF-NGDTIELAIIGDENPDLLGYTGIPTDKGPR-----F 235
Query: 459 KRGTTA 464
++ T+
Sbjct: 236 RKLTSQ 241
Score = 52.0 bits (124), Expect = 3e-08
Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 12/196 (6%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A K G T +G +GVV+ + +++ ++E + + I S +G +
Sbjct: 27 AVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLV 86
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+RK T I+ + + + ++ G
Sbjct: 87 D-------KSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGH 139
Query: 272 GTAADTQ-VTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEE-ECKKLVRDAIA 329
D S G + A L + E + + +
Sbjct: 140 DEFNGFSLYQVDPSGSYFPWKATAIG--KGSVAAKTFLEKRWNDELELEDAIHIALLTLK 197
Query: 330 AGVFNDLGSGSNIDLC 345
V + +G I+L
Sbjct: 198 ESVEGEF-NGDTIELA 212
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 224
Score = 135 bits (341), Expect = 9e-38
Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 28/232 (12%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TTIV + GV+L D RAT ++A ++ +K++ + AGTA L A
Sbjct: 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFA 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
+LE + G L M+ + L + G D
Sbjct: 61 VELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLD---------- 110
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHG--SSDTVPFCTMGSGSLAAMSVFESNWKPNMTEE 403
+ + + G + + +GSGSL A S + + P+ EE
Sbjct: 111 ---------ADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEE 161
Query: 404 ECKKLVRDAIAAGVFNDLGSGS-------NIDLCVIKKNGVEYLRPYEIANV 448
+ +++ +D +G I + G ++ + +
Sbjct: 162 TALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAGAVHVSEETTSEL 213
Score = 49.1 bits (116), Expect = 2e-07
Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 12/211 (5%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAFLAS 213
TTIV + GV+L D RAT ++A ++ Y+ + ++ + L +
Sbjct: 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFA 60
Query: 214 KGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGT 273
+ + + A + + + +
Sbjct: 61 VELEHYEKIEGVPLTFDGKANR-----LASMVRGNLGAAMQGLAVVPLLVGYDLDADDES 115
Query: 274 AADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQ-EEECKKLVRDAIAAGV 332
A V+ D++ + E + A L+++ EE + +++
Sbjct: 116 RAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAA 175
Query: 333 FNDLGSGSNIDLCGHVSAALVLGGVDDTGAH 363
+D +G G A+ + GA
Sbjct: 176 DDDSATGGPDLTRGIYPTAVT---ITQAGAV 203
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 132 bits (334), Expect = 2e-36
Identities = 41/233 (17%), Positives = 74/233 (31%), Gaps = 31/233 (13%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A + GTT +G DGVV + T +V +KN KI + ++I C +G D +
Sbjct: 26 AVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNV-KIQVVDRHIGCVYSGLIPDGRHL 84
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + K + L Q + +
Sbjct: 85 VNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLY---------------------- 122
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFE---SNWK 397
+ + + GGVD GAHL+ + P GS G G +A + E +
Sbjct: 123 --NSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHP 180
Query: 398 PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLR---PYEIAN 447
++ E K I ++ +++ + L ++
Sbjct: 181 EGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQ 233
Score = 51.9 bits (124), Expect = 3e-08
Identities = 28/200 (14%), Positives = 54/200 (27%), Gaps = 18/200 (9%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A + GTT +G DGVV + T +V +KN + I S + +
Sbjct: 26 AVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLV 85
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+ +K + A + + +
Sbjct: 86 NRGREEAASFKKLY----------KTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFG 135
Query: 272 GTAADTQ--VTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQE----EECKKLVR 325
G + + S TGK +A L +++ + E E K
Sbjct: 136 GVDKNGAHLYMLEPSGSYWGYKGAATGK--GRQSAKAELEKLVDHHPEGLSAREAVKQAA 193
Query: 326 DAIAAGVFNDLGSGSNIDLC 345
I ++ +++
Sbjct: 194 KIIYLAHEDNKEKDFELEIS 213
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit
(non-catalytic) {Archaeon Thermoplasma acidophilum
[TaxId: 2303]}
Length = 221
Score = 132 bits (332), Expect = 2e-36
Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 27/227 (11%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+T +G FA+GV+L +D + ++ + + +KI + + +G AD +V
Sbjct: 18 AVKKGSTALGMKFANGVLLISDKKVRS-RLIEQNSIEKIQLIDDYVAAVTSGLVADARVL 76
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
D + K+ G + + + + + +Y +
Sbjct: 77 VDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGV------------------- 117
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
+L+ G+D G LF+ P G+ + +GSG A +S E +K N+
Sbjct: 118 -----RPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENL 172
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVI-KKNGVEYLRPYEIA 446
E+E L A+ + + ++ I N E+
Sbjct: 173 PEKEAVTLGIKALKSSLEEGE-ELKAPEIASITVGNKYRIYDQEEVK 218
Score = 47.4 bits (112), Expect = 9e-07
Identities = 32/200 (16%), Positives = 51/200 (25%), Gaps = 22/200 (11%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A K G+T +G FA+GV+L +D + I + D +A S
Sbjct: 18 AVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTS---------- 67
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
G + A VA++ Q Y Y
Sbjct: 68 ---GLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSL 124
Query: 272 GTAADTQ-----VTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFR-YQEEECKKLVR 325
A Q D + E G L + E+E L
Sbjct: 125 IFAGIDQIGPRLFDCDPAGTINEYKATAIG--SGKDAVVSFLEREYKENLPEKEAVTLGI 182
Query: 326 DAIAAGVFNDLGSGSNIDLC 345
A+ + + ++
Sbjct: 183 KALKSSLEEGE-ELKAPEIA 201
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 132 bits (334), Expect = 2e-36
Identities = 33/226 (14%), Positives = 80/226 (35%), Gaps = 25/226 (11%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
+ T +G + +DG+VL A+ + T + + + +K++ + I AG AD ++
Sbjct: 27 SISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEIL 86
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + + V R L + Y +
Sbjct: 87 INTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHG--------------------- 125
Query: 341 NIDLCGHVSAALVLGGVD-DTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPN 399
+ + G D G L+ P G+ ++G+ + AA ++ + ++K +
Sbjct: 126 ---GLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDD 182
Query: 400 MTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEI 445
M ++ +L ++ + + ++ I+K + +I
Sbjct: 183 MKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKI 228
Score = 55.5 bits (133), Expect = 2e-09
Identities = 18/194 (9%), Positives = 50/194 (25%), Gaps = 7/194 (3%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
+ T +G + +DG+VL A+ + T + + + L + + L
Sbjct: 27 SISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEIL 86
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+ + + + + R D + + G
Sbjct: 87 INTARIHAQNYL-------KTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGY 139
Query: 272 GTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAG 331
Q+ T + K + L + ++ +L ++
Sbjct: 140 DDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKT 199
Query: 332 VFNDLGSGSNIDLC 345
+ + ++
Sbjct: 200 TDSSALTYDRLEFA 213
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 132 bits (333), Expect = 2e-36
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 26/229 (11%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+T VG D VVLG + ++ + E+ +KI + N+ AG AD ++
Sbjct: 24 AVKKGSTAVGVRGRDIVVLGVEKKSVAK-LQDERTVRKICALDDNVCMAFAGLTADARIV 82
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + + +L V R + + RY + ++
Sbjct: 83 INRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRP----------------- 125
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
+AL++G D L+ P G+ +G G+ + E N+
Sbjct: 126 ------FGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEA 179
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIANV 448
E + ++ I A + G NI+L V++++ ++ L P EI
Sbjct: 180 IETD-DLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKY 227
Score = 53.9 bits (129), Expect = 8e-09
Identities = 26/194 (13%), Positives = 50/194 (25%), Gaps = 9/194 (4%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A K G+T VG D VVLG + ++ + + D + + + + +
Sbjct: 24 AVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVI 83
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+ R T V ++ + + +
Sbjct: 84 NRARVECQSHRLTVED-------PVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD 136
Query: 272 GTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAG 331
TD + G + L + E ++ I A
Sbjct: 137 FDGTPRLYQTDPSGTYHAWKANAIG--RGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 194
Query: 332 VFNDLGSGSNIDLC 345
+ G NI+L
Sbjct: 195 LEVVQSGGKNIELA 208
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 242
Score = 132 bits (332), Expect = 3e-36
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+T +G +GVVLG + RAT + + + +KI + ++I C +G AD +
Sbjct: 22 AIKLGSTAIGIATKEGVVLGVEKRATSPLLES-DSIEKIVEIDRHIGCAMSGLTADARSM 80
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + L + V + + + + R+ E + + GV
Sbjct: 81 IEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGV-------- 132
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
A L+ G D G LF+ P G+ +GSGS A + + W ++
Sbjct: 133 ---------ALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSL 183
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVI-KKNGVEYLRPYEIA 446
T +E + LV + + L +N L I K++G + + A
Sbjct: 184 TLKEAELLVLKILKQVMEEKL-DENNAQLSCITKQDGFKIYDNEKTA 229
Score = 49.7 bits (118), Expect = 2e-07
Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 5/195 (2%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A K G+T +G +GVVLG + RAT + ++ ++ I +S + + +
Sbjct: 22 AIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMI 81
Query: 212 ASKGYSGPTARKT-GTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCG 270
+ T I V D + + + G
Sbjct: 82 EHARTAAVTHNLYYDEDINVESLTQSV---CDLALRFGEGASGEERLMSRPFGVALLIAG 138
Query: 271 AGTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAA 330
Q+ + LL + +E + LV +
Sbjct: 139 HDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQ 198
Query: 331 GVFNDLGSGSNIDLC 345
+ L +N L
Sbjct: 199 VMEEKL-DENNAQLS 212
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic)
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 203
Score = 130 bits (327), Expect = 5e-36
Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 30/224 (13%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TT VG D V++ + R T + + KN +K+ + AG D QV +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMK 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
++LEL +L + LL ML + +
Sbjct: 61 AELELYRLQRRVNMPIEAVATLLSNMLNQVK----------------------------Y 92
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
L++GG+D H+F+I G S + + GSGS V ES + MT +E
Sbjct: 93 MPYMVQLLVGGIDT-APHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEG 151
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVI-KKNGVEYLRPYEIANV 448
LV AI+A D SG ID+ VI +K+G L +I +
Sbjct: 152 VDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESR 195
Score = 49.4 bits (117), Expect = 2e-07
Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 15/190 (7%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFLASKGY 216
TT VG D V++ + R T + + KN + + G +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNG------KKLFQIDTYTGMTIAGLVGDAQV 54
Query: 217 SGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAAD 276
+ V + + AT + ++ YM + G
Sbjct: 55 LVRYMKAELELY---RLQRRVNMPIEAVAT----LLSNMLNQVKYMPYMVQLLVGGIDTA 107
Query: 277 TQV-TTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFND 335
V + D +E + +TG + L Q + +E LV AI+A D
Sbjct: 108 PHVFSIDAAGGSVEDIYASTGSGSPFVYGV-LESQYSEKMTVDEGVDLVIRAISAAKQRD 166
Query: 336 LGSGSNIDLC 345
SG ID+
Sbjct: 167 SASGGMIDVA 176
>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 245
Score = 130 bits (327), Expect = 2e-35
Identities = 41/230 (17%), Positives = 74/230 (32%), Gaps = 28/230 (12%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A + +T +G DGVV G + E + +++ + +++ AG AD +
Sbjct: 29 AVENSSTAIGIRCKDGVVFGVEKLVLSKLYE-EGSNKRLFNVDRHVGMAVAGLLADARSL 87
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
D+ + + N G + + + Y +
Sbjct: 88 ADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVR------------------ 129
Query: 341 NIDLCGHVSAALVLGGVD-DTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPN 399
+ +LG + GA L+ I P G S C +G AA + E
Sbjct: 130 ------PFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKE 183
Query: 400 MTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKK--NGVEYLRPYEIAN 447
MT + K V I ++L + + NG + P +I
Sbjct: 184 MTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIRE 233
Score = 45.0 bits (106), Expect = 8e-06
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSI 203
A + +T +G DGVV G + N L + + + V+ +
Sbjct: 29 AVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGL 80
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 243
Score = 129 bits (324), Expect = 5e-35
Identities = 41/230 (17%), Positives = 86/230 (37%), Gaps = 29/230 (12%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G T +G +GV+L AD R + +KI+ + ++I +G AD +V
Sbjct: 27 AVKRGATAIGIKCKEGVILIADKRVGSKLLEK-DTIEKIYKIDEHICAATSGLVADARVL 85
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
D + ++ +L V + + +Y
Sbjct: 86 IDRARIEAQINRLTYDIPITVKELAKKICDFKQQYT------------------------ 121
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
+L++ GV++ L+ P G+ +G G +A FE ++ ++
Sbjct: 122 QYGGVRPFGVSLLIAGVNEVP-KLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYRDDL 180
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEY--LRPYEIANV 448
+ ++ L A+ + ++L NI++ +K + + + P E+
Sbjct: 181 SFDDAMVLGLVAMGLSIESELVP-ENIEVGYVKVDDRTFKEVSPEELKPY 229
Score = 47.7 bits (113), Expect = 1e-06
Identities = 31/198 (15%), Positives = 53/198 (26%), Gaps = 19/198 (9%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A K G T +G +GV+L AD R + + + + I S
Sbjct: 27 AVKRGATAIGIKCKEGVILIADKRVGSKLLEKDTIEKIYKIDEHICAATS---------- 76
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
G + A T + + Q Y +
Sbjct: 77 ---GLVADARVLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSL 133
Query: 272 GTAADTQV----TTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDA 327
A +V TD + LE G +T ++ L A
Sbjct: 134 LIAGVNEVPKLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYR-DDLSFDDAMVLGLVA 192
Query: 328 IAAGVFNDLGSGSNIDLC 345
+ + ++L NI++
Sbjct: 193 MGLSIESELVP-ENIEVG 209
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 250
Score = 127 bits (319), Expect = 3e-34
Identities = 39/234 (16%), Positives = 81/234 (34%), Gaps = 30/234 (12%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A T +G + DGV+L A+ R + +KI+ + +++ C AG +D V
Sbjct: 26 AIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVL 85
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
T+ + + L + L + Y + K
Sbjct: 86 TNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGK------------------- 126
Query: 341 NIDLCGHVSAALVLGGVDD-TGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNW-KP 398
+L+ G D G L+ P G+ +G+ S AA+S+ + ++ +
Sbjct: 127 -----RPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEG 181
Query: 399 NMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNG----VEYLRPYEIANV 448
MT + L + + S +++ + + + L+ E+ +
Sbjct: 182 EMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQL 235
Score = 55.5 bits (133), Expect = 2e-09
Identities = 25/198 (12%), Positives = 53/198 (26%), Gaps = 14/198 (7%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCY-LLSYSDLIAVTVSSIGFQKNAF 210
A T +G + DGV+L A+ R + + ++ +A +V+ I N
Sbjct: 26 AIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVL 85
Query: 211 LASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCG 270
+ + + A D A ++ G
Sbjct: 86 TNELRLIAQRYLLQ--------YQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIG 137
Query: 271 AGTAADTQV-TTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQ--EEECKKLVRDA 327
Q+ +D + G A +L+Q + + L
Sbjct: 138 WDKHYGFQLYQSDPSGNYGGWKATCIG--NNSAAAVSMLKQDYKEGEMTLKSALALAIKV 195
Query: 328 IAAGVFNDLGSGSNIDLC 345
+ + S +++
Sbjct: 196 LNKTMDVSKLSAEKVEIA 213
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 204
Score = 125 bits (315), Expect = 3e-34
Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 37/232 (15%)
Query: 225 GTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLI 284
G ++ + V + AD R + + QKI M +Y AG A D Q +
Sbjct: 7 GGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRL 66
Query: 285 ASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDL 344
+L L +L G+ + T ++ +L+ +
Sbjct: 67 KFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFG-------------------------- 100
Query: 345 CGHVSAALVLGGVDDTGAHLFNIYPHGSSDTV---PFCTMGSGSLAAMSVFESNWKPNMT 401
V+ G+D F + F G+ + + ES W+PNM
Sbjct: 101 --PYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMD 158
Query: 402 EEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKD 453
+ + + A+ V D SG + + +I+K+ + +K + D
Sbjct: 159 PDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKI------TTRTLKARMD 204
Score = 52.9 bits (126), Expect = 1e-08
Identities = 20/193 (10%), Positives = 45/193 (23%), Gaps = 15/193 (7%)
Query: 156 GTTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAFLA 212
G ++ + V + AD R + + + + I + + Q A
Sbjct: 7 GGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRL 66
Query: 213 SKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAG 272
+ ++ T + + + +Y I
Sbjct: 67 KFRLNLYELKEGRQIKP------------YTLMSMVANLLYEKRFGPYYTEPVIAGLDPK 114
Query: 273 TAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGV 332
T + DLI + + + + A+ V
Sbjct: 115 TFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAV 174
Query: 333 FNDLGSGSNIDLC 345
D SG + +
Sbjct: 175 DRDAVSGMGVIVH 187
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 124 bits (313), Expect = 8e-34
Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 47/234 (20%)
Query: 224 TGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDL 283
G TI+G D VL DTR D + + K+ NI G AAD
Sbjct: 8 NGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKR 67
Query: 284 IASQLELLKLN-TGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNI 342
+ ++ + K + +A R ++ +L+ +
Sbjct: 68 FKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR-------------------------- 101
Query: 343 DLCGHVSAALVLGGVDDTG-AHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWK---- 397
++ G+D+ G +++ P GS + G+ + M ++
Sbjct: 102 --FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ 159
Query: 398 -------------PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVE 438
++ EE KLVRD+ + + G +++ ++ K+GV
Sbjct: 160 YEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVR 213
Score = 55.6 bits (133), Expect = 2e-09
Identities = 30/198 (15%), Positives = 54/198 (27%), Gaps = 7/198 (3%)
Query: 155 TGTTIVGAIFADGVVLGADTRATDDTIVAEKNC---YLLSYSDLIAVTVSSIGFQKNAFL 211
G TI+G D VL DTR D + + + + +++ +
Sbjct: 8 NGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKR 67
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+ A + + V +Y
Sbjct: 68 FKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDP 127
Query: 272 -GTAADTQVTTDLIASQL---ELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDA 327
G+ Q A+ L L K N +++ L EE KLVRD+
Sbjct: 128 VGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDS 187
Query: 328 IAAGVFNDLGSGSNIDLC 345
+ + G +++
Sbjct: 188 FTSATERHIQVGDGLEIL 205
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 199
Score = 124 bits (311), Expect = 9e-34
Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 25/222 (11%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
++G D V++ +D A + + + + K+ M++ I G A DT + I
Sbjct: 2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQ 61
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
++L K+ G A R+ L V +A
Sbjct: 62 KNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLA---------------- 105
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
G + G L+ + + PF G G+ +S+ + + P ++ E
Sbjct: 106 ---------GYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERA 156
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIAN 447
+L+R + + + + +I KNG+ L
Sbjct: 157 VELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPK 198
Score = 46.0 bits (108), Expect = 3e-06
Identities = 17/193 (8%), Positives = 45/193 (23%), Gaps = 17/193 (8%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC-YLLSYSDLIAVTVSSIGFQKNAFLASKG 215
++G D V++ +D A + + + + + S+ I + F
Sbjct: 2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQ 61
Query: 216 YSGPTAR-KTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTA 274
+ + + G + A + ++ AG
Sbjct: 62 KNVQLYKMRNGYELSPTAAA-------------NFTRRNLADCLRSRTPYHVNLLLAGYD 108
Query: 275 ADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQ--EEECKKLVRDAIAAGV 332
+ L K + + E +L+R +
Sbjct: 109 EHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQ 168
Query: 333 FNDLGSGSNIDLC 345
+ + +
Sbjct: 169 KRFILNLPTFSVR 181
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 243
Score = 124 bits (311), Expect = 3e-33
Identities = 25/237 (10%), Positives = 63/237 (26%), Gaps = 32/237 (13%)
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
Y+ +T + D V+ + + D ++ I +++ I G
Sbjct: 21 YAFKATNQTNINSLAVRGKDCTVVISQKKVPDK-LLDPTTVSYIFCISRTIGMVVNGPIP 79
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFND 335
D + ++ + G + + + Y +
Sbjct: 80 DARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQ------------------ 121
Query: 336 LGSGSNIDLCGHVSAALVLGGVD-DTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFES 394
+ L VD + G ++ P G G + E+
Sbjct: 122 ------RAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLEN 175
Query: 395 NWKPNMTEEECKKLVRDAIAAG------VFNDLGSGSNIDLCVIKKNGVEYLRPYEI 445
++K + + ++ + S +++++ V K+ L I
Sbjct: 176 HFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAENI 232
Score = 45.1 bits (106), Expect = 6e-06
Identities = 9/64 (14%), Positives = 19/64 (29%)
Query: 147 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQ 206
Y+ +T + D V+ + + D + Y+ S I + V+
Sbjct: 21 YAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPD 80
Query: 207 KNAF 210
Sbjct: 81 ARNA 84
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 213
Score = 121 bits (304), Expect = 1e-32
Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 44/240 (18%)
Query: 224 TGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDL 283
G TI+ D ++ +DTR ++ + ++ K + + +G D T +
Sbjct: 8 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKI 67
Query: 284 IASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNID 343
I ++L++ K + K +L +L+ +
Sbjct: 68 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYV--------------------- 106
Query: 344 LCGHVSAALVLGGVDDTGAHLFNIYPHGSS-DTVPFCTMGSGSLAAMSVFESNWK----- 397
++GG+D+ G + S F GS S + ++
Sbjct: 107 -------YNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQ 159
Query: 398 ----PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKD 453
++ + +LV+D + D+ +G + +C++ K G+ V +KD
Sbjct: 160 NVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI------REETVSLRKD 213
Score = 51.8 bits (123), Expect = 3e-08
Identities = 21/193 (10%), Positives = 50/193 (25%), Gaps = 6/193 (3%)
Query: 155 TGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSD--LIAVTVSSIGFQKNAFLA 212
G TI+ D ++ +DTR ++ + ++ + G
Sbjct: 8 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKI 67
Query: 213 SKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAG 272
+ + A + +R V +Y
Sbjct: 68 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPV 127
Query: 273 TAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGV 332
+ ++ L L ++ N + + +LV+D +
Sbjct: 128 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPL----SLDRAMRLVKDVFISAA 183
Query: 333 FNDLGSGSNIDLC 345
D+ +G + +C
Sbjct: 184 ERDVYTGDALRIC 196
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 238
Score = 121 bits (305), Expect = 2e-32
Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 31/230 (13%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+ VG VL A RA + +K KI ++ +I AG AD ++
Sbjct: 25 AVKQGSATVGLKSKTHAVLVALKRAQSELAAHQK---KILHVDNHIGISIAGLTADARLL 81
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + + + + V L+ + ++
Sbjct: 82 CNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRR------------------ 123
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
L++ G DD G H+F P + ++G+ S +A + E + M
Sbjct: 124 ------PYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 177
Query: 401 --TEEECKKLVRDAIAAGVFNDLG-SGSNIDLCVIKKN-GVEYLRPYEIA 446
E K A+ + + + N+ + ++ K+ +++
Sbjct: 178 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVS 227
Score = 46.9 bits (111), Expect = 2e-06
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQ 206
A K G+ VG VL A RA + +K + I++ + +
Sbjct: 25 AVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADAR 79
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 241
Score = 121 bits (304), Expect = 3e-32
Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 27/230 (11%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K GT VG + VVLG + R+T K+ + ++ +G AD+++
Sbjct: 24 AVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRIL 83
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ + + +L V R + + RY +
Sbjct: 84 IEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQS---------------------- 121
Query: 341 NIDLCGHVSAALVLGGVDDT--GAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKP 398
+ ++ G D L+ P G + T+G S E N+
Sbjct: 122 --GGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDR 179
Query: 399 NMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIAN 447
++ V+ + + + NI++ V+K + + L EI
Sbjct: 180 KEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQ 229
Score = 44.3 bits (104), Expect = 1e-05
Identities = 29/198 (14%), Positives = 54/198 (27%), Gaps = 14/198 (7%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSY-SDLIAVTVSSIGFQKNAF 210
A K GT VG + VVLG + R+T +S + ++ S +
Sbjct: 24 AVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRIL 83
Query: 211 LASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCG 270
+ + R T D V + TR + + G
Sbjct: 84 IEKARVEAQSHRLT--------LEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAG 135
Query: 271 AGTAADTQVT--TDLIASQLELLKLNTGKIPRVITANRLLRQML-FRYQEEECKKLVRDA 327
D T+ G+ T L + + ++ V+
Sbjct: 136 FDPRDDEPKLYQTEPSGIYSSWSAQTIGR--NSKTVREFLEKNYDRKEPPATVEECVKLT 193
Query: 328 IAAGVFNDLGSGSNIDLC 345
+ + + NI++
Sbjct: 194 VRSLLEVVQTGAKNIEIT 211
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 204
Score = 118 bits (296), Expect = 1e-31
Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 32/217 (14%)
Query: 225 GTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLI 284
G +V D V + D R ++ +KI + +++ G A D ++
Sbjct: 8 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEMF 66
Query: 285 ASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDL 344
+ L KL + T +L+ L+ +
Sbjct: 67 RYKTNLYKLKEERAIEPETFTQLVSSSLYERR---------------------------- 98
Query: 345 CGHVSAALVLGGVDDTGAHLFNIY--PHGSSDTVP-FCTMGSGSLAAMSVFESNWKPNMT 401
G V+ G++ F G D F G+ S + ES ++PN+
Sbjct: 99 FGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLE 158
Query: 402 EEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVE 438
E+ + + A+ D SG + +IKK+ V
Sbjct: 159 PEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVV 195
Score = 53.3 bits (127), Expect = 9e-09
Identities = 17/191 (8%), Positives = 42/191 (21%), Gaps = 12/191 (6%)
Query: 156 GTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFLASKG 215
G +V D V + D R ++ + + + + ++
Sbjct: 8 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGIT-------GLATDVT 60
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
R + + +++ + + +
Sbjct: 61 TLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLY---ERRFGPYFVGPVVAGINSKSGK 117
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQ-EEECKKLVRDAIAAGVFN 334
DLI E K + + E+ + + A+
Sbjct: 118 PFIAGFDLIGCIDE-AKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADR 176
Query: 335 DLGSGSNIDLC 345
D SG +
Sbjct: 177 DALSGWGAVVY 187
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 244
Score = 117 bits (293), Expect = 1e-30
Identities = 37/235 (15%), Positives = 71/235 (30%), Gaps = 31/235 (13%)
Query: 216 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAA 275
Y+ + G T V D V+ + D + + + + +NI C G A
Sbjct: 26 YAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDS-STVTHLFKITENIGCVMTGMTA 84
Query: 276 DTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFND 335
D++ + K G V + + + Y
Sbjct: 85 DSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVY-------------------- 124
Query: 336 LGSGSNIDLCGHVSAALVLGGVD-DTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFES 394
+ L ++L G+D + G ++ P G G + S E
Sbjct: 125 TQNAEMRPLGCC----MILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEK 180
Query: 395 NWK--PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEY--LRPYEI 445
K + T E+ + ++ + D S I++ V+ ++ L EI
Sbjct: 181 KVKKKFDWTFEQTVETAITCLSTVLSIDFKP-SEIEVGVVTVENPKFRILTEAEI 234
Score = 45.4 bits (107), Expect = 5e-06
Identities = 9/60 (15%), Positives = 21/60 (35%)
Query: 147 YSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQ 206
Y+ + G T V D V+ + D + + +L ++ I ++ +
Sbjct: 26 YAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTAD 85
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 233
Score = 116 bits (292), Expect = 1e-30
Identities = 34/228 (14%), Positives = 73/228 (32%), Gaps = 26/228 (11%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A G VG A+GVVL + + E++ K+ + K+I +G D +V
Sbjct: 27 AVAGGAPSVGIKAANGVVLATEKKQKSILY-DERSVHKVEPITKHIGLVYSGMGPDYRVL 85
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
+ L + + + ++ Y +
Sbjct: 86 VHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQ----------------------- 122
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNM 400
+L++ G ++ +LF P G+ MG + + E + ++
Sbjct: 123 -SGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDL 181
Query: 401 TEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANV 448
E+ + + + NI++ + + G L P E+ +
Sbjct: 182 ELEDAIHTAILTLKESFEGQM-TEDNIEVGICNEAGFRRLTPTEVKDY 228
Score = 53.2 bits (127), Expect = 1e-08
Identities = 21/194 (10%), Positives = 48/194 (24%), Gaps = 10/194 (5%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIGFQKNAFL 211
A G VG A+GVVL + + + + I + S +G +
Sbjct: 27 AVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLV 86
Query: 212 ASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGA 271
+ + + + + + ++ CG
Sbjct: 87 HRARKLAQQYYLV--------YQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGW 138
Query: 272 GTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAG 331
+D + GK L ++ + E+ +
Sbjct: 139 NEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTF-LEKRYNEDLELEDAIHTAILTLKES 197
Query: 332 VFNDLGSGSNIDLC 345
+ + NI++
Sbjct: 198 FEGQM-TEDNIEVG 210
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 115 bits (289), Expect = 3e-30
Identities = 45/231 (19%), Positives = 80/231 (34%), Gaps = 32/231 (13%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
A K G+ VG VL A R D+ +K KI +++ AG A D +V
Sbjct: 27 AIKQGSVTVGLRSNTHAVLVALKRNADELSSYQK---KIIKCDEHMGLSLAGLAPDARVL 83
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
++ + Q L + V A LL + + S
Sbjct: 84 SNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQ--------------------SYG 123
Query: 341 NIDLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWK--- 397
L++ G D +GAHL P G+ + +G+ S A + E
Sbjct: 124 GRPYGVG----LLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFI 179
Query: 398 -PNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCVIKKN-GVEYLRPYEIA 446
+ +E K +AI+ + ++ + N+ + ++ K+ +A
Sbjct: 180 KIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVA 230
Score = 47.4 bits (112), Expect = 1e-06
Identities = 22/204 (10%), Positives = 56/204 (27%), Gaps = 27/204 (13%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSIG------- 204
A K G+ VG VL A R D+ +K + + ++++ +
Sbjct: 27 AIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKII--KCDEHMGLSLAGLAPDARVLS 84
Query: 205 --FQKNAFLASKGYSGPTARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIH-Y 261
++ +S ++ A + ++ ++ + H
Sbjct: 85 NYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLL 144
Query: 262 MAKNIYCCGAGTAADTQVTTDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECK 321
+ + + LE L + +E
Sbjct: 145 EFQPSGNVTELYGTAIGARSQGAKTYLE---------------RTLDTFIKIDGNPDELI 189
Query: 322 KLVRDAIAAGVFNDLGSGSNIDLC 345
K +AI+ + ++ + N+ +
Sbjct: 190 KAGVEAISQSLRDESLTVDNLSIA 213
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 227
Score = 108 bits (270), Expect = 1e-27
Identities = 25/227 (11%), Positives = 64/227 (28%), Gaps = 41/227 (18%)
Query: 221 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVT 280
G ++V F DGV+ A+ +T K+ + + G + +
Sbjct: 15 GIARGRSVVVLTFRDGVLFVAENPSTAL--------HKVSELYDRLGFAAVGKYNEFENL 66
Query: 281 TDLIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGS 340
++ + + R L + + +
Sbjct: 67 RRAGIVHADMRGYSYDRRDVTG---RSLANAYAQTLGTIFTEQPK--------------- 108
Query: 341 NIDLCGHVSAALVLGGVD----DTGAHLFNIYPHGS-SDTVPFCTMGSGSLAAMSVFESN 395
+ + V L+ I GS D F MG + + +
Sbjct: 109 ------PYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRES 162
Query: 396 WKPNMTEEECKKLVRDAIAAGVFNDLGSG----SNIDLCVIKKNGVE 438
++ ++ E + +A+ G + +++++ V+ ++
Sbjct: 163 YRADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPR 209
Score = 44.6 bits (105), Expect = 8e-06
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 7/52 (13%)
Query: 152 ARKTGTTIVGAIFADGVVLGADTRATDDTIVAEKNCYLLSYSDLIAVTVSSI 203
G ++V F DGV+ A+ +T V+E D +
Sbjct: 15 GIARGRSVVVLTFRDGVLFVAENPSTALHKVSE-------LYDRLGFAAVGK 59
>d1m4ya_ d.153.1.4 (A:) HslV (ClpQ) protease {Thermotoga maritima
[TaxId: 2336]}
Length = 171
Score = 95.2 bits (236), Expect = 1e-23
Identities = 27/204 (13%), Positives = 56/204 (27%), Gaps = 36/204 (17%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKNIYCCGAGTAADTQVTTDLIA 285
TTI+ V+G D + T + V + N +K+ + + G + +T
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60
Query: 286 SQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDLC 345
V A + R E
Sbjct: 61 EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEA--------------------------- 93
Query: 346 GHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEEC 405
+L D + + +GSG A++ ++ + T+
Sbjct: 94 -------LLLVADKENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLR--NTDLSA 144
Query: 406 KKLVRDAIAAGVFNDLGSGSNIDL 429
+++V A+ + + NI +
Sbjct: 145 REIVEKAMTIAGEICIYTNQNIVI 168
Score = 43.2 bits (101), Expect = 1e-05
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC 187
TTI+ V+G D + T + V + N
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNA 31
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis
[TaxId: 1423]}
Length = 180
Score = 93.3 bits (231), Expect = 7e-23
Identities = 26/213 (12%), Positives = 55/213 (25%), Gaps = 41/213 (19%)
Query: 225 GTTIVGAIFADGVVLGADTRATDDTIVAEKNCQKI--HYMAKNIYCCGAGTAADTQVTTD 282
TTI + D + T V K+ + + AG+ AD +
Sbjct: 5 ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFE 64
Query: 283 LIASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNI 342
++LE N + + ++L + +
Sbjct: 65 KFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLE-------------------------- 98
Query: 343 DLCGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTE 402
+ + +G +GSG A++ + K
Sbjct: 99 ---AMLIVMNQDTLLLVSGTGEVIEPDD------GILAIGSGGNYALAAGRALKKHAGES 149
Query: 403 EECKKLVRDA--IAAGVFNDLGSGSNIDLCVIK 433
++ R A A + + + I L ++
Sbjct: 150 MSASEIARAALETAGEI--CVYTNDQIILEELE 180
Score = 44.8 bits (105), Expect = 5e-06
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 156 GTTIVGAIFADGVVLGADTRATDDTIVAEKNC 187
TTI + D + T V K+
Sbjct: 5 ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHT 36
>d1g3ka_ d.153.1.4 (A:) HslV (ClpQ) protease {Haemophilus influenzae
[TaxId: 727]}
Length = 173
Score = 90.2 bits (223), Expect = 8e-22
Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 41/210 (19%)
Query: 226 TTIVGAIFADGVVLGADTRATDDTIVAEKNCQKIHYMAKN-IYCCGAGTAADTQVTTDLI 284
TTIV VV+G D + + V + N +K+ + + AG AD +L
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60
Query: 285 ASQLELLKLNTGKIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGVFNDLGSGSNIDL 344
+LE+ + + K + + + L + +
Sbjct: 61 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLE---------------------------- 92
Query: 345 CGHVSAALVLGGVDDTGAHLFNIYPHGSSDTVPFCTMGSGSLAAMSVFESNWKPNMTEEE 404
A+++ + + I + +GSG A+S TE
Sbjct: 93 ------AMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAAR--ALVENTELS 144
Query: 405 CKKLVRDA--IAAGVFNDLGSGSNIDLCVI 432
++V + IA + + + +N + +
Sbjct: 145 AHEIVEKSLRIAGDI--CVFTNTNFTIEEL 172
Score = 44.8 bits (105), Expect = 4e-06
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 157 TTIVGAIFADGVVLGADTRATDDTIVAEKNC 187
TTIV VV+G D + + V + N
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNA 31
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus
subtilis [TaxId: 1423]}
Length = 311
Score = 34.2 bits (77), Expect = 0.026
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 385 SLAAMSVFESNWKPNMTEEECKKLVRDAIAAGV 417
L +V N PN+ EE K+LVR+AI GV
Sbjct: 16 GLGTNAVGGHNLYPNLNEETGKELVREAIRNGV 48
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.9 bits (66), Expect = 0.65
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 8/43 (18%)
Query: 291 LKLNTG-KIPRVITANRLLRQMLFRYQEEECKKLVRDAIAAGV 332
+KL G +P++ +++ EE ++ A+ G
Sbjct: 6 IKLQDGNVMPQLGLG-------VWQASNEEVITAIQKALEVGY 41
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 28.5 bits (62), Expect = 1.8
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 289 ELLKLNTGKIPRVITANRLLRQMLFRYQ 316
L K RV+ N L +ML Q
Sbjct: 443 TLHSSVNDKGLRVLEDNSALDKMLQNVQ 470
>d1ylqa1 d.218.1.5 (A:1-90) Putative nucleotidyltransferase AF0614
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 90
Score = 26.7 bits (59), Expect = 2.2
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 403 EECKKLVRDA-------IAAGVFNDLGSGSNIDLCVIKKNGVEYLRPYEIANVKGKKDGD 455
E KK V+DA + G ++ S+ID+ ++ + R E KK D
Sbjct: 6 EITKKDVQDAEIYLYGSVVEGDYSI--GLSDIDVAIVSDVFEDRNRKLEFFGKITKKFFD 63
Query: 456 YRF 458
F
Sbjct: 64 SPF 66
>d1iyjb1 a.170.1.1 (B:2403-2598) BRCA2 helical domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 196
Score = 27.6 bits (61), Expect = 2.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 300 RVITANRLLRQMLFRYQEE 318
R + R+L Q+ +RY E
Sbjct: 173 RCLNPERVLLQLKYRYDVE 191
>d1dqua_ c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidulans
[TaxId: 162425]}
Length = 519
Score = 27.7 bits (61), Expect = 4.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 395 NWKPNMTEEECKKLVRDAIAAGVF 418
NWK M +E + ++ A G
Sbjct: 428 NWKKAMPRDEQETYIKRLGALGYA 451
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 319
Score = 27.2 bits (59), Expect = 4.1
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 9/45 (20%)
Query: 291 LKLNTG-KIPRVI--TANRLLRQMLFRYQEEECKKLVRDAIAAGV 332
+ LN G IP + T + + ++E K + AI G
Sbjct: 8 VALNDGNFIPVLGFGTT------VPEKVAKDEVIKATKIAIDNGF 46
>d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba
histolytica [TaxId: 5759]}
Length = 260
Score = 26.4 bits (57), Expect = 8.6
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 395 NWKPNMTEEECKKLVRDAIAAGVFNDLGSGSNIDLCV 431
NWK N T + L + +AA V +L + + V
Sbjct: 10 NWKCNGTLASIETLTK-GVAASVDAELAKKVEVIVGV 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.406
Gapped
Lambda K H
0.267 0.0493 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,812,318
Number of extensions: 86088
Number of successful extensions: 396
Number of sequences better than 10.0: 1
Number of HSP's gapped: 315
Number of HSP's successfully gapped: 87
Length of query: 486
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 397
Effective length of database: 1,185,626
Effective search space: 470693522
Effective search space used: 470693522
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)