Query psy11001
Match_columns 81
No_of_seqs 117 out of 2005
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 15:40:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11001.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11001hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vdc_G Glutamate synthase [NAD 99.9 4.9E-22 1.7E-26 143.7 6.7 80 1-80 68-150 (456)
2 1gte_A Dihydropyrimidine dehyd 99.7 1.3E-18 4.4E-23 135.3 6.2 80 1-80 125-216 (1025)
3 2bry_A NEDD9 interacting prote 99.4 6.3E-14 2.2E-18 101.8 0.5 79 1-80 30-120 (497)
4 3fpz_A Thiazole biosynthetic e 99.1 2.9E-11 9.9E-16 82.9 4.5 68 2-80 26-95 (326)
5 1o94_A Tmadh, trimethylamine d 99.1 4.1E-11 1.4E-15 90.5 2.8 75 3-80 342-417 (729)
6 2xag_A Lysine-specific histone 99.1 2.2E-10 7.5E-15 88.4 6.8 72 9-80 233-306 (852)
7 3kkj_A Amine oxidase, flavin-c 99.1 1.6E-10 5.5E-15 72.5 4.5 28 53-80 3-30 (336)
8 2z3y_A Lysine-specific histone 99.0 2.2E-10 7.7E-15 85.6 5.6 72 9-80 62-135 (662)
9 1d4d_A Flavocytochrome C fumar 98.9 5.7E-10 2E-14 82.2 3.1 75 2-80 66-154 (572)
10 3k30_A Histamine dehydrogenase 98.9 4.6E-10 1.6E-14 84.1 1.7 32 49-80 388-419 (690)
11 3oz2_A Digeranylgeranylglycero 98.8 4.6E-09 1.6E-13 71.7 4.0 29 52-80 4-32 (397)
12 1mo9_A ORF3; nucleotide bindin 98.7 2.1E-08 7.2E-13 72.9 5.8 64 17-80 5-71 (523)
13 4dgk_A Phytoene dehydrogenase; 98.7 9E-09 3.1E-13 73.3 3.7 28 53-80 2-29 (501)
14 4fk1_A Putative thioredoxin re 98.7 1.6E-08 5.6E-13 68.2 4.1 29 52-80 6-34 (304)
15 4a5l_A Thioredoxin reductase; 98.7 1.8E-08 6.2E-13 67.5 4.2 29 52-80 4-32 (314)
16 3itj_A Thioredoxin reductase 1 98.6 2.1E-08 7.1E-13 67.4 3.6 31 50-80 20-50 (338)
17 4gcm_A TRXR, thioredoxin reduc 98.6 2.7E-08 9.3E-13 67.0 4.1 29 52-80 6-34 (312)
18 3rp8_A Flavoprotein monooxygen 98.6 3.7E-08 1.3E-12 68.7 4.2 32 49-80 20-51 (407)
19 2gjc_A Thiazole biosynthetic e 98.6 8.1E-09 2.8E-13 72.5 0.7 61 20-80 14-95 (326)
20 4hb9_A Similarities with proba 98.6 3.6E-08 1.2E-12 67.7 3.9 28 53-80 2-29 (412)
21 1ps9_A 2,4-dienoyl-COA reducta 98.6 1.2E-08 4.1E-13 76.2 1.5 31 50-80 371-401 (671)
22 4gde_A UDP-galactopyranose mut 98.6 3.3E-08 1.1E-12 70.2 3.3 31 50-80 8-39 (513)
23 1ryi_A Glycine oxidase; flavop 98.5 7.2E-08 2.5E-12 66.2 3.9 31 50-80 15-45 (382)
24 2e1m_A L-glutamate oxidase; L- 98.5 1.6E-07 5.4E-12 66.8 5.6 62 9-80 5-72 (376)
25 3r9u_A Thioredoxin reductase; 98.5 1.1E-07 3.7E-12 63.3 4.1 30 51-80 3-32 (315)
26 3dme_A Conserved exported prot 98.5 1.3E-07 4.3E-12 64.1 4.2 29 52-80 4-32 (369)
27 3ka7_A Oxidoreductase; structu 98.4 1.4E-07 4.8E-12 65.7 3.8 28 53-80 1-28 (425)
28 3nlc_A Uncharacterized protein 98.4 2.2E-07 7.6E-12 68.8 5.1 30 51-80 106-135 (549)
29 1yvv_A Amine oxidase, flavin-c 98.4 2E-07 6.9E-12 62.9 4.5 28 53-80 3-30 (336)
30 3fbs_A Oxidoreductase; structu 98.4 1.8E-07 6.2E-12 61.8 4.0 28 53-80 3-30 (297)
31 2x8g_A Thioredoxin glutathione 98.4 4E-08 1.4E-12 72.2 0.8 30 51-80 106-135 (598)
32 3cgv_A Geranylgeranyl reductas 98.4 1.8E-07 6E-12 64.4 4.0 28 53-80 5-32 (397)
33 3f8d_A Thioredoxin reductase ( 98.4 1.9E-07 6.4E-12 62.2 4.0 29 52-80 15-43 (323)
34 3nix_A Flavoprotein/dehydrogen 98.4 1.8E-07 6E-12 65.1 3.6 29 52-80 5-33 (421)
35 2b9w_A Putative aminooxidase; 98.4 2.9E-07 1E-11 64.3 4.7 30 51-80 5-35 (424)
36 3nrn_A Uncharacterized protein 98.4 2.2E-07 7.5E-12 65.1 4.0 28 53-80 1-28 (421)
37 3dje_A Fructosyl amine: oxygen 98.4 3.1E-07 1.1E-11 64.5 4.7 29 52-80 6-35 (438)
38 3lzw_A Ferredoxin--NADP reduct 98.4 2.4E-07 8.1E-12 62.1 4.0 29 52-80 7-35 (332)
39 3ihm_A Styrene monooxygenase A 98.4 1.7E-07 5.8E-12 66.5 3.4 30 51-80 21-50 (430)
40 3k7m_X 6-hydroxy-L-nicotine ox 98.4 2.1E-07 7.2E-12 65.0 3.7 28 53-80 2-29 (431)
41 2oln_A NIKD protein; flavoprot 98.4 2.9E-07 9.8E-12 63.8 4.2 28 53-80 5-32 (397)
42 2vou_A 2,6-dihydroxypyridine h 98.4 3E-07 1E-11 64.1 4.3 29 52-80 5-33 (397)
43 1y0p_A Fumarate reductase flav 98.4 4.4E-07 1.5E-11 66.5 5.3 30 51-80 125-154 (571)
44 2jae_A L-amino acid oxidase; o 98.4 3.2E-07 1.1E-11 65.4 4.4 30 51-80 10-39 (489)
45 1y56_B Sarcosine oxidase; dehy 98.4 3.4E-07 1.2E-11 62.9 4.5 29 52-80 5-33 (382)
46 1c0p_A D-amino acid oxidase; a 98.4 3.4E-07 1.2E-11 62.9 4.4 29 52-80 6-34 (363)
47 2cul_A Glucose-inhibited divis 98.4 4.2E-07 1.4E-11 59.6 4.6 29 52-80 3-31 (232)
48 3nks_A Protoporphyrinogen oxid 98.4 2.2E-07 7.6E-12 65.7 3.4 28 53-80 3-32 (477)
49 2gf3_A MSOX, monomeric sarcosi 98.4 3.6E-07 1.2E-11 62.8 4.3 29 52-80 3-31 (389)
50 1k0i_A P-hydroxybenzoate hydro 98.4 3.3E-07 1.1E-11 63.5 4.1 28 53-80 3-30 (394)
51 2uzz_A N-methyl-L-tryptophan o 98.4 2.7E-07 9.3E-12 63.1 3.7 28 53-80 3-30 (372)
52 3nyc_A D-arginine dehydrogenas 98.4 2.2E-07 7.4E-12 63.5 3.1 30 50-80 7-36 (381)
53 1s3e_A Amine oxidase [flavin-c 98.3 3.8E-07 1.3E-11 65.7 4.1 29 52-80 4-32 (520)
54 4gut_A Lysine-specific histone 98.3 6.3E-07 2.2E-11 68.6 5.5 57 24-80 302-364 (776)
55 3alj_A 2-methyl-3-hydroxypyrid 98.3 4.3E-07 1.5E-11 62.9 4.2 29 52-80 11-39 (379)
56 2gag_B Heterotetrameric sarcos 98.3 4.5E-07 1.5E-11 62.6 4.2 31 50-80 19-51 (405)
57 2xdo_A TETX2 protein; tetracyc 98.3 3.9E-07 1.3E-11 63.5 4.0 29 52-80 26-54 (398)
58 3i6d_A Protoporphyrinogen oxid 98.3 1.9E-07 6.6E-12 65.4 2.4 29 52-80 5-39 (470)
59 3pvc_A TRNA 5-methylaminomethy 98.3 5.6E-07 1.9E-11 67.4 5.0 30 51-80 263-292 (689)
60 3c96_A Flavin-containing monoo 98.3 5.1E-07 1.7E-11 63.2 4.5 29 52-80 4-33 (410)
61 3cty_A Thioredoxin reductase; 98.3 4.2E-07 1.4E-11 61.2 4.0 29 52-80 16-44 (319)
62 4a9w_A Monooxygenase; baeyer-v 98.3 4.4E-07 1.5E-11 61.1 3.9 28 53-80 4-31 (357)
63 2x3n_A Probable FAD-dependent 98.3 4.4E-07 1.5E-11 63.0 4.0 29 52-80 6-34 (399)
64 1trb_A Thioredoxin reductase; 98.3 3.8E-07 1.3E-11 61.1 3.5 29 52-80 5-33 (320)
65 3v76_A Flavoprotein; structura 98.3 5.1E-07 1.8E-11 64.4 4.3 30 51-80 26-55 (417)
66 2q7v_A Thioredoxin reductase; 98.3 4.7E-07 1.6E-11 61.1 4.0 29 52-80 8-36 (325)
67 2bcg_G Secretory pathway GDP d 98.3 5.5E-07 1.9E-11 64.3 4.4 29 52-80 11-39 (453)
68 1fl2_A Alkyl hydroperoxide red 98.3 4.6E-07 1.6E-11 60.6 3.8 28 53-80 2-29 (310)
69 1rsg_A FMS1 protein; FAD bindi 98.3 4.2E-07 1.4E-11 65.6 3.8 29 52-80 8-37 (516)
70 2qa1_A PGAE, polyketide oxygen 98.3 5.7E-07 1.9E-11 65.3 4.5 30 51-80 10-39 (500)
71 2ivd_A PPO, PPOX, protoporphyr 98.3 4.4E-07 1.5E-11 64.2 3.8 29 52-80 16-44 (478)
72 3urh_A Dihydrolipoyl dehydroge 98.3 5.6E-07 1.9E-11 64.6 4.3 29 52-80 25-53 (491)
73 2zbw_A Thioredoxin reductase; 98.3 5.2E-07 1.8E-11 60.9 4.0 29 52-80 5-33 (335)
74 3atr_A Conserved archaeal prot 98.3 4E-07 1.4E-11 64.7 3.5 29 52-80 6-34 (453)
75 2a87_A TRXR, TR, thioredoxin r 98.3 4.7E-07 1.6E-11 61.5 3.7 30 51-80 13-42 (335)
76 2qa2_A CABE, polyketide oxygen 98.3 5.7E-07 1.9E-11 65.2 4.2 30 51-80 11-40 (499)
77 3ab1_A Ferredoxin--NADP reduct 98.3 6.3E-07 2.1E-11 61.4 4.2 29 52-80 14-42 (360)
78 1vdc_A NTR, NADPH dependent th 98.3 5.5E-07 1.9E-11 60.8 3.8 29 52-80 8-36 (333)
79 3ps9_A TRNA 5-methylaminomethy 98.3 6.2E-07 2.1E-11 66.9 4.4 30 51-80 271-300 (676)
80 2yg5_A Putrescine oxidase; oxi 98.3 5.6E-07 1.9E-11 63.3 4.0 29 52-80 5-33 (453)
81 3lad_A Dihydrolipoamide dehydr 98.3 7.3E-07 2.5E-11 63.6 4.5 29 52-80 3-31 (476)
82 2q0l_A TRXR, thioredoxin reduc 98.3 6.4E-07 2.2E-11 59.9 4.0 28 53-80 2-30 (311)
83 2i0z_A NAD(FAD)-utilizing dehy 98.3 8E-07 2.7E-11 63.3 4.6 30 51-80 25-54 (447)
84 2vvm_A Monoamine oxidase N; FA 98.3 6.2E-07 2.1E-11 63.9 4.0 28 53-80 40-67 (495)
85 3o0h_A Glutathione reductase; 98.3 6.7E-07 2.3E-11 64.2 4.2 29 52-80 26-54 (484)
86 2ywl_A Thioredoxin reductase r 98.3 7.6E-07 2.6E-11 55.7 4.0 28 53-80 2-29 (180)
87 3ihg_A RDME; flavoenzyme, anth 98.3 6.7E-07 2.3E-11 64.7 4.0 29 52-80 5-33 (535)
88 3c4a_A Probable tryptophan hyd 98.2 7.3E-07 2.5E-11 61.9 3.8 28 53-80 1-30 (381)
89 2iid_A L-amino-acid oxidase; f 98.2 9.1E-07 3.1E-11 63.1 4.4 30 51-80 32-61 (498)
90 1sez_A Protoporphyrinogen oxid 98.2 7.5E-07 2.6E-11 63.5 3.8 29 52-80 13-41 (504)
91 3d1c_A Flavin-containing putat 98.2 8.6E-07 2.9E-11 60.5 4.0 28 53-80 5-33 (369)
92 3e1t_A Halogenase; flavoprotei 98.2 7.3E-07 2.5E-11 64.5 3.6 29 52-80 7-35 (512)
93 3i3l_A Alkylhalidase CMLS; fla 98.2 9.6E-07 3.3E-11 65.6 4.3 29 52-80 23-51 (591)
94 3jsk_A Cypbp37 protein; octame 98.2 1.2E-06 3.9E-11 61.9 4.4 29 52-80 79-109 (344)
95 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 5.6E-07 1.9E-11 61.4 2.7 28 53-80 2-32 (342)
96 4dna_A Probable glutathione re 98.2 9.1E-07 3.1E-11 63.1 3.8 29 52-80 5-33 (463)
97 2gqf_A Hypothetical protein HI 98.2 1.2E-06 4E-11 62.1 4.3 28 53-80 5-32 (401)
98 1v0j_A UDP-galactopyranose mut 98.2 1.2E-06 4.1E-11 61.7 4.4 29 52-80 7-36 (399)
99 3dgh_A TRXR-1, thioredoxin red 98.2 1.1E-06 3.8E-11 62.9 4.3 30 51-80 8-37 (483)
100 3c4n_A Uncharacterized protein 98.2 8.5E-07 2.9E-11 62.2 3.6 29 52-80 36-66 (405)
101 1qo8_A Flavocytochrome C3 fuma 98.2 8.1E-07 2.8E-11 65.1 3.6 30 51-80 120-149 (566)
102 3ics_A Coenzyme A-disulfide re 98.2 1.1E-06 3.7E-11 64.4 4.1 31 50-80 34-66 (588)
103 3lov_A Protoporphyrinogen oxid 98.2 1E-06 3.4E-11 62.5 3.8 29 52-80 4-34 (475)
104 3fg2_P Putative rubredoxin red 98.2 1.4E-06 4.9E-11 61.1 4.5 28 53-80 2-31 (404)
105 1rp0_A ARA6, thiazole biosynth 98.2 1E-06 3.5E-11 59.4 3.6 29 52-80 39-68 (284)
106 3g3e_A D-amino-acid oxidase; F 98.2 8.4E-07 2.9E-11 60.6 3.1 27 54-80 2-34 (351)
107 3dk9_A Grase, GR, glutathione 98.2 1.4E-06 4.6E-11 62.4 4.3 30 51-80 19-48 (478)
108 1hyu_A AHPF, alkyl hydroperoxi 98.2 1.4E-06 4.8E-11 63.4 4.4 30 51-80 211-240 (521)
109 3hdq_A UDP-galactopyranose mut 98.2 1.6E-06 5.4E-11 62.0 4.5 31 50-80 27-57 (397)
110 2gv8_A Monooxygenase; FMO, FAD 98.2 1.4E-06 4.7E-11 61.9 4.1 29 52-80 6-36 (447)
111 1zk7_A HGII, reductase, mercur 98.2 1.6E-06 5.3E-11 61.9 4.4 29 52-80 4-32 (467)
112 3fmw_A Oxygenase; mithramycin, 98.2 1.4E-06 4.9E-11 64.3 4.2 30 51-80 48-77 (570)
113 2qae_A Lipoamide, dihydrolipoy 98.2 1.6E-06 5.3E-11 61.9 4.2 29 52-80 2-30 (468)
114 2aqj_A Tryptophan halogenase, 98.2 1.5E-06 5.2E-11 63.1 4.2 29 52-80 5-36 (538)
115 2qcu_A Aerobic glycerol-3-phos 98.2 1.7E-06 5.8E-11 62.5 4.4 29 52-80 3-31 (501)
116 3axb_A Putative oxidoreductase 98.2 9.7E-07 3.3E-11 62.2 3.0 29 52-80 23-52 (448)
117 1dxl_A Dihydrolipoamide dehydr 98.2 1.9E-06 6.4E-11 61.3 4.5 30 51-80 5-34 (470)
118 4at0_A 3-ketosteroid-delta4-5a 98.2 1.5E-06 5E-11 63.0 4.0 29 52-80 41-69 (510)
119 2r0c_A REBC; flavin adenine di 98.1 1.7E-06 5.9E-11 63.2 4.2 29 52-80 26-54 (549)
120 3l8k_A Dihydrolipoyl dehydroge 98.1 1.7E-06 5.8E-11 61.9 4.0 28 53-80 5-32 (466)
121 3dgz_A Thioredoxin reductase 2 98.1 1.6E-06 5.4E-11 62.3 3.8 30 51-80 5-34 (488)
122 1fec_A Trypanothione reductase 98.1 1.9E-06 6.6E-11 62.1 4.1 29 52-80 3-32 (490)
123 1v59_A Dihydrolipoamide dehydr 98.1 1.8E-06 6.3E-11 61.6 4.0 29 52-80 5-33 (478)
124 2e4g_A Tryptophan halogenase; 98.1 2.1E-06 7E-11 62.8 4.2 29 52-80 25-56 (550)
125 1i8t_A UDP-galactopyranose mut 98.1 2E-06 6.8E-11 60.1 4.0 28 53-80 2-29 (367)
126 3lxd_A FAD-dependent pyridine 98.1 1.8E-06 6.3E-11 60.6 3.8 30 51-80 8-39 (415)
127 2weu_A Tryptophan 5-halogenase 98.1 1.3E-06 4.3E-11 62.8 3.0 28 53-80 3-33 (511)
128 2a8x_A Dihydrolipoyl dehydroge 98.1 2E-06 6.8E-11 61.3 4.0 28 53-80 4-31 (464)
129 1ebd_A E3BD, dihydrolipoamide 98.1 2.5E-06 8.5E-11 60.7 4.3 28 53-80 4-31 (455)
130 3vrd_B FCCB subunit, flavocyto 98.1 2.4E-06 8.1E-11 59.4 4.1 29 52-80 2-32 (401)
131 2r9z_A Glutathione amide reduc 98.1 2.5E-06 8.4E-11 61.1 4.2 29 52-80 4-32 (463)
132 3qfa_A Thioredoxin reductase 1 98.1 3E-06 1E-10 61.6 4.7 30 51-80 31-60 (519)
133 2yqu_A 2-oxoglutarate dehydrog 98.1 2.4E-06 8.1E-11 60.8 4.1 28 53-80 2-29 (455)
134 2gmh_A Electron transfer flavo 98.1 2.3E-06 7.9E-11 63.2 4.2 29 52-80 35-69 (584)
135 3h8l_A NADH oxidase; membrane 98.1 2.1E-06 7.2E-11 60.0 3.7 28 53-80 2-32 (409)
136 3ic9_A Dihydrolipoamide dehydr 98.1 1.9E-06 6.6E-11 62.1 3.6 29 52-80 8-36 (492)
137 1lvl_A Dihydrolipoamide dehydr 98.1 2.6E-06 8.7E-11 60.9 4.1 29 52-80 5-33 (458)
138 2hqm_A GR, grase, glutathione 98.1 2.3E-06 7.9E-11 61.4 3.9 29 52-80 11-39 (479)
139 2pyx_A Tryptophan halogenase; 98.1 2E-06 6.9E-11 62.4 3.6 29 52-80 7-47 (526)
140 3da1_A Glycerol-3-phosphate de 98.1 2.6E-06 8.9E-11 62.7 4.1 29 52-80 18-46 (561)
141 1zmd_A Dihydrolipoyl dehydroge 98.1 2.6E-06 8.8E-11 60.9 4.0 29 52-80 6-34 (474)
142 1onf_A GR, grase, glutathione 98.1 3.2E-06 1.1E-10 61.1 4.4 28 53-80 3-30 (500)
143 3h28_A Sulfide-quinone reducta 98.1 3.2E-06 1.1E-10 59.7 4.2 28 53-80 3-32 (430)
144 3iwa_A FAD-dependent pyridine 98.1 2.3E-06 7.7E-11 61.1 3.4 28 53-80 4-33 (472)
145 4g6h_A Rotenone-insensitive NA 98.1 2.3E-06 7.9E-11 62.3 3.5 34 47-80 37-70 (502)
146 2e5v_A L-aspartate oxidase; ar 98.1 3.4E-06 1.1E-10 60.8 4.2 27 54-80 1-27 (472)
147 2dkh_A 3-hydroxybenzoate hydro 98.1 3E-06 1E-10 63.1 4.0 29 52-80 32-61 (639)
148 1ges_A Glutathione reductase; 98.1 2.7E-06 9.1E-11 60.7 3.6 29 52-80 4-32 (450)
149 2wpf_A Trypanothione reductase 98.1 2.9E-06 9.9E-11 61.3 3.8 29 52-80 7-36 (495)
150 4dsg_A UDP-galactopyranose mut 98.0 4.4E-06 1.5E-10 60.3 4.7 29 52-80 9-38 (484)
151 3ces_A MNMG, tRNA uridine 5-ca 98.0 3.6E-06 1.2E-10 63.7 4.4 30 51-80 27-56 (651)
152 2bi7_A UDP-galactopyranose mut 98.0 3.4E-06 1.2E-10 59.3 4.0 28 53-80 4-31 (384)
153 3oc4_A Oxidoreductase, pyridin 98.0 3E-06 1E-10 60.2 3.8 28 53-80 3-32 (452)
154 3kd9_A Coenzyme A disulfide re 98.0 3.5E-06 1.2E-10 59.8 4.1 29 52-80 3-33 (449)
155 2rgh_A Alpha-glycerophosphate 98.0 4.1E-06 1.4E-10 61.7 4.6 29 52-80 32-60 (571)
156 3g5s_A Methylenetetrahydrofola 98.0 4E-06 1.4E-10 61.0 4.3 28 53-80 2-29 (443)
157 1ojt_A Surface protein; redox- 98.0 3.4E-06 1.2E-10 60.5 4.0 29 52-80 6-34 (482)
158 3ef6_A Toluene 1,2-dioxygenase 98.0 4.2E-06 1.4E-10 58.9 4.3 28 53-80 3-32 (410)
159 2zxi_A TRNA uridine 5-carboxym 98.0 4.2E-06 1.4E-10 63.2 4.5 30 51-80 26-55 (637)
160 3cp8_A TRNA uridine 5-carboxym 98.0 4E-06 1.4E-10 63.3 4.2 30 51-80 20-49 (641)
161 2xve_A Flavin-containing monoo 98.0 4.6E-06 1.6E-10 59.9 4.3 28 53-80 3-36 (464)
162 2eq6_A Pyruvate dehydrogenase 98.0 3.9E-06 1.3E-10 60.0 4.0 29 52-80 6-34 (464)
163 3ntd_A FAD-dependent pyridine 98.0 3.7E-06 1.3E-10 61.0 3.8 28 53-80 2-31 (565)
164 1w4x_A Phenylacetone monooxyge 98.0 4.2E-06 1.4E-10 61.0 4.0 29 52-80 16-44 (542)
165 3s5w_A L-ornithine 5-monooxyge 98.0 2.9E-06 9.8E-11 60.0 3.1 29 52-80 30-63 (463)
166 2wdq_A Succinate dehydrogenase 98.0 4.6E-06 1.6E-10 61.8 4.2 29 52-80 7-35 (588)
167 2h88_A Succinate dehydrogenase 98.0 4.7E-06 1.6E-10 62.4 4.2 29 52-80 18-46 (621)
168 1pj5_A N,N-dimethylglycine oxi 98.0 5.4E-06 1.9E-10 63.1 4.5 29 52-80 4-33 (830)
169 1xdi_A RV3303C-LPDA; reductase 98.0 3.2E-06 1.1E-10 60.9 3.1 28 53-80 3-33 (499)
170 3klj_A NAD(FAD)-dependent dehy 98.0 4.7E-06 1.6E-10 58.6 3.8 31 50-80 7-37 (385)
171 3hyw_A Sulfide-quinone reducta 98.0 5.5E-06 1.9E-10 58.7 4.0 28 53-80 3-32 (430)
172 1d5t_A Guanine nucleotide diss 98.0 7E-06 2.4E-10 58.4 4.5 29 52-80 6-34 (433)
173 3ayj_A Pro-enzyme of L-phenyla 98.0 3.2E-06 1.1E-10 64.6 2.8 30 51-80 55-92 (721)
174 2bs2_A Quinol-fumarate reducta 98.0 5.6E-06 1.9E-10 62.4 4.0 29 52-80 5-33 (660)
175 2gqw_A Ferredoxin reductase; f 98.0 7.5E-06 2.5E-10 57.7 4.4 30 51-80 6-37 (408)
176 1cjc_A Protein (adrenodoxin re 98.0 6.4E-06 2.2E-10 59.3 4.0 30 51-80 5-36 (460)
177 4ap3_A Steroid monooxygenase; 98.0 5.5E-06 1.9E-10 60.9 3.7 29 52-80 21-49 (549)
178 1pn0_A Phenol 2-monooxygenase; 97.9 6.8E-06 2.3E-10 61.7 4.2 29 52-80 8-41 (665)
179 3uox_A Otemo; baeyer-villiger 97.9 7.9E-06 2.7E-10 60.1 4.4 29 52-80 9-37 (545)
180 3sx6_A Sulfide-quinone reducta 97.9 5E-06 1.7E-10 58.9 3.2 29 52-80 4-35 (437)
181 1kf6_A Fumarate reductase flav 97.9 7.3E-06 2.5E-10 60.9 4.2 29 52-80 5-35 (602)
182 1chu_A Protein (L-aspartate ox 97.9 6.2E-06 2.1E-10 60.5 3.8 28 52-80 8-35 (540)
183 2cdu_A NADPH oxidase; flavoenz 97.9 6.8E-06 2.3E-10 58.3 3.8 28 53-80 1-30 (452)
184 1q1r_A Putidaredoxin reductase 97.9 8.3E-06 2.8E-10 57.9 4.1 29 52-80 4-34 (431)
185 2v3a_A Rubredoxin reductase; a 97.9 8.7E-06 3E-10 56.6 4.1 26 52-77 4-29 (384)
186 1b37_A Protein (polyamine oxid 97.9 8.4E-06 2.9E-10 58.0 4.1 29 52-80 4-33 (472)
187 3pl8_A Pyranose 2-oxidase; sub 97.9 7E-06 2.4E-10 61.3 3.8 29 52-80 46-74 (623)
188 4eqs_A Coenzyme A disulfide re 97.9 6.9E-06 2.4E-10 58.5 3.6 28 53-80 1-30 (437)
189 1lqt_A FPRA; NADP+ derivative, 97.9 6E-06 2E-10 59.4 3.3 29 52-80 3-38 (456)
190 1xhc_A NADH oxidase /nitrite r 97.9 7.1E-06 2.4E-10 57.2 3.4 29 51-80 7-35 (367)
191 1nhp_A NADH peroxidase; oxidor 97.9 8.9E-06 3.1E-10 57.7 3.8 28 53-80 1-30 (447)
192 3gwf_A Cyclohexanone monooxyge 97.9 8.3E-06 2.8E-10 59.9 3.7 29 52-80 8-37 (540)
193 3gyx_A Adenylylsulfate reducta 97.9 1E-05 3.5E-10 61.0 4.1 30 51-80 21-56 (662)
194 2gag_A Heterotetrameric sarcos 97.9 9.6E-06 3.3E-10 63.1 4.0 29 52-80 128-156 (965)
195 1m6i_A Programmed cell death p 97.9 8.5E-06 2.9E-10 58.9 3.4 30 51-80 10-41 (493)
196 1jnr_A Adenylylsulfate reducta 97.9 1.1E-05 3.9E-10 60.2 4.0 30 51-80 21-54 (643)
197 2bc0_A NADH oxidase; flavoprot 97.8 1.1E-05 3.7E-10 58.1 3.2 29 52-80 35-66 (490)
198 3cgb_A Pyridine nucleotide-dis 97.8 1.5E-05 5.2E-10 57.1 3.8 29 52-80 36-66 (480)
199 1kdg_A CDH, cellobiose dehydro 97.8 2E-05 6.8E-10 57.4 4.2 30 51-80 6-35 (546)
200 1y56_A Hypothetical protein PH 97.8 1E-05 3.4E-10 58.5 2.6 28 52-80 108-135 (493)
201 4b1b_A TRXR, thioredoxin reduc 97.8 1.8E-05 6.1E-10 58.4 3.7 29 52-80 42-70 (542)
202 3p1w_A Rabgdi protein; GDI RAB 97.8 2E-05 6.8E-10 57.6 3.8 30 51-80 19-48 (475)
203 3t37_A Probable dehydrogenase; 97.5 6.7E-05 2.3E-09 53.8 3.6 29 52-80 17-46 (526)
204 1ju2_A HydroxynitrIle lyase; f 97.3 0.0001 3.5E-09 53.9 2.8 28 52-80 26-53 (536)
205 4gcm_A TRXR, thioredoxin reduc 97.3 0.00018 6E-09 48.2 3.8 29 52-80 145-173 (312)
206 1n4w_A CHOD, cholesterol oxida 97.3 0.00017 5.9E-09 52.2 4.0 29 52-80 5-33 (504)
207 4b63_A L-ornithine N5 monooxyg 97.3 0.00012 4.2E-09 53.0 3.2 27 51-77 38-64 (501)
208 2g1u_A Hypothetical protein TM 97.3 0.00029 1E-08 43.3 4.4 32 49-80 16-47 (155)
209 3lk7_A UDP-N-acetylmuramoylala 97.3 0.00019 6.7E-09 51.4 3.8 30 51-80 8-37 (451)
210 4a5l_A Thioredoxin reductase; 97.3 0.00022 7.6E-09 47.4 3.8 30 51-80 151-180 (314)
211 1coy_A Cholesterol oxidase; ox 97.3 0.00022 7.5E-09 51.7 4.0 30 51-80 10-39 (507)
212 2x5o_A UDP-N-acetylmuramoylala 97.3 0.0002 7E-09 51.1 3.8 30 51-80 4-33 (439)
213 3fwz_A Inner membrane protein 97.3 0.00053 1.8E-08 41.6 5.2 31 50-80 5-35 (140)
214 1nhp_A NADH peroxidase; oxidor 97.2 0.00039 1.3E-08 49.2 4.3 30 51-80 148-177 (447)
215 3klj_A NAD(FAD)-dependent dehy 97.2 0.00038 1.3E-08 48.9 4.2 29 52-80 146-174 (385)
216 1lvl_A Dihydrolipoamide dehydr 97.1 0.0004 1.4E-08 49.5 4.0 29 52-80 171-199 (458)
217 3q9t_A Choline dehydrogenase a 97.1 0.0003 1E-08 52.2 3.3 30 51-80 5-35 (577)
218 2yqu_A 2-oxoglutarate dehydrog 97.1 0.00059 2E-08 48.4 4.5 29 52-80 167-195 (455)
219 1ebd_A E3BD, dihydrolipoamide 97.0 0.00061 2.1E-08 48.3 4.2 29 52-80 170-198 (455)
220 2eq6_A Pyruvate dehydrogenase 97.0 0.00061 2.1E-08 48.6 4.2 29 52-80 169-197 (464)
221 3llv_A Exopolyphosphatase-rela 97.0 0.00094 3.2E-08 40.1 4.5 29 52-80 6-34 (141)
222 2jbv_A Choline oxidase; alcoho 97.0 0.00044 1.5E-08 50.7 3.4 29 52-80 13-42 (546)
223 1lss_A TRK system potassium up 97.0 0.00088 3E-08 39.6 4.0 28 53-80 5-32 (140)
224 1v59_A Dihydrolipoamide dehydr 97.0 0.00072 2.5E-08 48.1 4.2 29 52-80 183-211 (478)
225 3gwf_A Cyclohexanone monooxyge 97.0 0.00035 1.2E-08 51.3 2.5 31 50-80 176-206 (540)
226 3ic5_A Putative saccharopine d 97.0 0.00078 2.7E-08 38.7 3.6 29 52-80 5-34 (118)
227 2v3a_A Rubredoxin reductase; a 97.0 0.00089 3E-08 46.4 4.4 29 52-80 145-173 (384)
228 1gpe_A Protein (glucose oxidas 97.0 0.00059 2E-08 50.5 3.6 30 51-80 23-53 (587)
229 3d1c_A Flavin-containing putat 96.9 0.00091 3.1E-08 45.3 4.3 30 51-80 165-194 (369)
230 2xve_A Flavin-containing monoo 96.9 0.0008 2.7E-08 48.2 4.1 31 50-80 195-225 (464)
231 1xhc_A NADH oxidase /nitrite r 96.9 0.00066 2.2E-08 47.2 3.5 29 52-80 143-171 (367)
232 2gqw_A Ferredoxin reductase; f 96.9 0.00095 3.2E-08 46.9 4.4 29 52-80 145-173 (408)
233 2hmt_A YUAA protein; RCK, KTN, 96.9 0.0013 4.3E-08 38.9 4.3 29 52-80 6-34 (144)
234 3qvp_A Glucose oxidase; oxidor 96.9 0.00063 2.2E-08 50.6 3.5 30 51-80 18-48 (583)
235 2bc0_A NADH oxidase; flavoprot 96.9 0.0011 3.8E-08 47.5 4.5 30 51-80 193-222 (490)
236 1ges_A Glutathione reductase; 96.9 0.0011 3.8E-08 47.1 4.4 29 52-80 167-195 (450)
237 1id1_A Putative potassium chan 96.9 0.0016 5.4E-08 39.8 4.6 29 52-80 3-31 (153)
238 2gv8_A Monooxygenase; FMO, FAD 96.9 0.001 3.5E-08 47.0 4.1 31 50-80 210-241 (447)
239 3c85_A Putative glutathione-re 96.9 0.0018 6.1E-08 40.5 4.9 30 51-80 38-68 (183)
240 2r9z_A Glutathione amide reduc 96.8 0.0013 4.4E-08 47.0 4.5 29 52-80 166-194 (463)
241 3fim_B ARYL-alcohol oxidase; A 96.8 0.00056 1.9E-08 50.7 2.6 29 52-80 2-31 (566)
242 2q0l_A TRXR, thioredoxin reduc 96.8 0.0012 4E-08 43.9 3.9 30 51-80 142-171 (311)
243 2x8g_A Thioredoxin glutathione 96.8 0.0016 5.3E-08 47.8 4.8 29 52-80 286-314 (598)
244 3uox_A Otemo; baeyer-villiger 96.8 0.00049 1.7E-08 50.5 2.0 31 50-80 183-213 (545)
245 3ado_A Lambda-crystallin; L-gu 96.8 0.0015 5E-08 45.6 4.3 29 52-80 6-34 (319)
246 1ojt_A Surface protein; redox- 96.8 0.0012 4.2E-08 47.2 4.0 29 52-80 185-213 (482)
247 3cgb_A Pyridine nucleotide-dis 96.8 0.0011 3.9E-08 47.4 3.7 30 51-80 185-214 (480)
248 1q1r_A Putidaredoxin reductase 96.7 0.0016 5.4E-08 46.1 4.4 29 52-80 149-177 (431)
249 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.0019 6.6E-08 43.0 4.5 32 49-80 28-59 (223)
250 3ic9_A Dihydrolipoamide dehydr 96.7 0.0017 5.9E-08 46.7 4.6 30 51-80 173-202 (492)
251 2a8x_A Dihydrolipoyl dehydroge 96.7 0.0015 5.2E-08 46.3 4.2 29 52-80 171-199 (464)
252 1zmd_A Dihydrolipoyl dehydroge 96.7 0.0015 5.2E-08 46.4 4.2 29 52-80 178-206 (474)
253 3eag_A UDP-N-acetylmuramate:L- 96.7 0.0014 4.9E-08 45.1 3.9 30 51-80 3-33 (326)
254 4b1b_A TRXR, thioredoxin reduc 96.7 0.0019 6.3E-08 47.7 4.7 30 51-80 222-251 (542)
255 1fl2_A Alkyl hydroperoxide red 96.7 0.0013 4.5E-08 43.6 3.6 30 51-80 143-172 (310)
256 3ef6_A Toluene 1,2-dioxygenase 96.7 0.0018 6.1E-08 45.4 4.4 29 52-80 143-171 (410)
257 3kd9_A Coenzyme A disulfide re 96.7 0.002 6.7E-08 45.6 4.5 30 51-80 147-176 (449)
258 2q7v_A Thioredoxin reductase; 96.7 0.0015 5.3E-08 43.7 3.8 30 51-80 151-180 (325)
259 1dxl_A Dihydrolipoamide dehydr 96.7 0.0013 4.5E-08 46.6 3.5 29 52-80 177-205 (470)
260 1trb_A Thioredoxin reductase; 96.7 0.0016 5.6E-08 43.2 3.8 30 51-80 144-173 (320)
261 1vdc_A NTR, NADPH dependent th 96.7 0.0016 5.6E-08 43.5 3.8 30 51-80 158-187 (333)
262 2hqm_A GR, grase, glutathione 96.6 0.0021 7.1E-08 46.0 4.2 29 52-80 185-213 (479)
263 2a87_A TRXR, TR, thioredoxin r 96.6 0.0019 6.5E-08 43.6 3.8 30 51-80 154-183 (335)
264 3urh_A Dihydrolipoyl dehydroge 96.6 0.0022 7.5E-08 45.9 4.3 30 51-80 197-226 (491)
265 1onf_A GR, grase, glutathione 96.6 0.0019 6.5E-08 46.5 3.9 29 52-80 176-204 (500)
266 3itj_A Thioredoxin reductase 1 96.6 0.002 6.9E-08 42.8 3.8 31 50-80 171-201 (338)
267 1zk7_A HGII, reductase, mercur 96.6 0.0023 7.8E-08 45.4 4.2 29 52-80 176-204 (467)
268 3ntd_A FAD-dependent pyridine 96.6 0.0025 8.5E-08 46.1 4.4 29 52-80 151-179 (565)
269 3qfa_A Thioredoxin reductase 1 96.6 0.003 1E-07 45.8 4.8 29 52-80 210-238 (519)
270 3dgz_A Thioredoxin reductase 2 96.6 0.0031 1.1E-07 45.1 4.8 30 51-80 184-213 (488)
271 3dk9_A Grase, GR, glutathione 96.6 0.0024 8.2E-08 45.5 4.2 29 52-80 187-215 (478)
272 1kyq_A Met8P, siroheme biosynt 96.6 0.0017 5.8E-08 44.5 3.3 31 50-80 11-41 (274)
273 4eqs_A Coenzyme A disulfide re 96.5 0.0023 8E-08 45.4 4.1 29 52-80 147-175 (437)
274 1f0y_A HCDH, L-3-hydroxyacyl-C 96.5 0.0031 1E-07 42.6 4.5 29 52-80 15-43 (302)
275 3s5w_A L-ornithine 5-monooxyge 96.5 0.0015 5.3E-08 45.9 3.1 30 51-80 226-257 (463)
276 4ap3_A Steroid monooxygenase; 96.5 0.0019 6.7E-08 47.4 3.7 31 50-80 189-219 (549)
277 4e12_A Diketoreductase; oxidor 96.5 0.0026 8.8E-08 42.8 4.0 28 53-80 5-32 (283)
278 2qae_A Lipoamide, dihydrolipoy 96.5 0.0026 8.9E-08 45.2 4.2 29 52-80 174-202 (468)
279 2zbw_A Thioredoxin reductase; 96.5 0.0019 6.5E-08 43.3 3.2 30 51-80 151-180 (335)
280 3vtf_A UDP-glucose 6-dehydroge 96.5 0.0028 9.6E-08 46.1 4.3 34 47-80 16-49 (444)
281 2cdu_A NADPH oxidase; flavoenz 96.5 0.0024 8.2E-08 45.2 3.9 30 51-80 148-177 (452)
282 3cty_A Thioredoxin reductase; 96.5 0.0023 7.9E-08 42.7 3.5 30 51-80 154-183 (319)
283 3l8k_A Dihydrolipoyl dehydroge 96.5 0.0034 1.2E-07 44.6 4.5 30 51-80 171-200 (466)
284 3hwr_A 2-dehydropantoate 2-red 96.4 0.003 1E-07 43.2 4.0 30 51-80 18-47 (318)
285 3lxd_A FAD-dependent pyridine 96.4 0.0034 1.2E-07 43.8 4.3 29 52-80 152-180 (415)
286 3fg2_P Putative rubredoxin red 96.4 0.0033 1.1E-07 43.8 4.2 29 52-80 142-170 (404)
287 2vdc_G Glutamate synthase [NAD 96.4 0.0043 1.5E-07 44.5 4.8 31 50-80 262-293 (456)
288 3lad_A Dihydrolipoamide dehydr 96.4 0.0041 1.4E-07 44.2 4.5 30 51-80 179-208 (476)
289 2dpo_A L-gulonate 3-dehydrogen 96.3 0.0042 1.4E-07 43.0 4.3 29 52-80 6-34 (319)
290 4a9w_A Monooxygenase; baeyer-v 96.3 0.0036 1.2E-07 41.7 3.9 30 50-80 161-190 (357)
291 3dgh_A TRXR-1, thioredoxin red 96.3 0.0045 1.5E-07 44.2 4.5 30 51-80 186-215 (483)
292 1hyu_A AHPF, alkyl hydroperoxi 96.3 0.0033 1.1E-07 45.6 3.7 30 51-80 354-383 (521)
293 3i83_A 2-dehydropantoate 2-red 96.3 0.004 1.4E-07 42.5 3.9 28 53-80 3-30 (320)
294 3dtt_A NADP oxidoreductase; st 96.3 0.0048 1.6E-07 40.6 4.2 31 50-80 17-47 (245)
295 3fbs_A Oxidoreductase; structu 96.3 0.0029 9.8E-08 41.4 3.0 29 51-80 140-168 (297)
296 3oc4_A Oxidoreductase, pyridin 96.3 0.0049 1.7E-07 43.6 4.3 30 51-80 146-175 (452)
297 2y0c_A BCEC, UDP-glucose dehyd 96.2 0.004 1.4E-07 45.3 3.9 29 52-80 8-36 (478)
298 3ghy_A Ketopantoate reductase 96.2 0.005 1.7E-07 42.2 4.2 28 53-80 4-31 (335)
299 3ab1_A Ferredoxin--NADP reduct 96.2 0.0033 1.1E-07 42.7 3.2 30 51-80 162-191 (360)
300 3f8d_A Thioredoxin reductase ( 96.2 0.005 1.7E-07 40.6 4.0 30 51-80 153-182 (323)
301 1ks9_A KPA reductase;, 2-dehyd 96.2 0.0048 1.6E-07 40.7 3.9 27 54-80 2-28 (291)
302 3ics_A Coenzyme A-disulfide re 96.2 0.0051 1.8E-07 44.9 4.3 30 51-80 186-215 (588)
303 3l4b_C TRKA K+ channel protien 96.2 0.0044 1.5E-07 39.9 3.5 27 54-80 2-28 (218)
304 4b63_A L-ornithine N5 monooxyg 96.2 0.006 2E-07 44.1 4.5 31 50-80 244-276 (501)
305 3hn2_A 2-dehydropantoate 2-red 96.2 0.0044 1.5E-07 42.1 3.7 28 53-80 3-30 (312)
306 2wpf_A Trypanothione reductase 96.2 0.005 1.7E-07 44.4 4.0 29 52-80 191-222 (495)
307 2ew2_A 2-dehydropantoate 2-red 96.2 0.0053 1.8E-07 40.9 3.9 28 53-80 4-31 (316)
308 3r9u_A Thioredoxin reductase; 96.1 0.0049 1.7E-07 40.5 3.7 30 51-80 146-175 (315)
309 3doj_A AT3G25530, dehydrogenas 96.1 0.0069 2.4E-07 41.2 4.4 31 50-80 19-49 (310)
310 2wtb_A MFP2, fatty acid multif 96.1 0.018 6.1E-07 43.9 7.0 29 52-80 312-340 (725)
311 1pzg_A LDH, lactate dehydrogen 96.1 0.008 2.7E-07 41.7 4.7 29 52-80 9-38 (331)
312 1fec_A Trypanothione reductase 96.1 0.0058 2E-07 43.9 4.0 29 52-80 187-218 (490)
313 3k6j_A Protein F01G10.3, confi 96.1 0.0064 2.2E-07 44.3 4.2 30 51-80 53-82 (460)
314 4a7p_A UDP-glucose dehydrogena 96.0 0.0059 2E-07 44.2 3.9 29 52-80 8-36 (446)
315 4ffl_A PYLC; amino acid, biosy 96.0 0.0066 2.2E-07 41.7 4.0 28 53-80 2-29 (363)
316 3gg2_A Sugar dehydrogenase, UD 96.0 0.006 2.1E-07 44.0 3.9 28 53-80 3-30 (450)
317 1xdi_A RV3303C-LPDA; reductase 96.0 0.0089 3E-07 42.8 4.8 29 52-80 182-210 (499)
318 1mo9_A ORF3; nucleotide bindin 96.0 0.007 2.4E-07 43.8 4.2 28 53-80 215-242 (523)
319 3g17_A Similar to 2-dehydropan 96.0 0.007 2.4E-07 40.8 3.9 28 53-80 3-30 (294)
320 1lld_A L-lactate dehydrogenase 96.0 0.0083 2.8E-07 40.6 4.2 28 53-80 8-37 (319)
321 2raf_A Putative dinucleotide-b 95.9 0.0085 2.9E-07 38.6 4.0 30 51-80 18-47 (209)
322 3iwa_A FAD-dependent pyridine 95.9 0.0082 2.8E-07 42.6 4.3 29 52-80 159-188 (472)
323 1zej_A HBD-9, 3-hydroxyacyl-CO 95.9 0.0078 2.7E-07 41.3 4.0 29 51-80 11-39 (293)
324 1z82_A Glycerol-3-phosphate de 95.9 0.0086 2.9E-07 41.0 4.2 29 52-80 14-42 (335)
325 3oj0_A Glutr, glutamyl-tRNA re 95.9 0.0027 9.3E-08 38.4 1.5 29 52-80 21-49 (144)
326 1pjq_A CYSG, siroheme synthase 95.9 0.0074 2.5E-07 43.5 3.9 31 50-80 10-40 (457)
327 1nyt_A Shikimate 5-dehydrogena 95.9 0.0096 3.3E-07 39.9 4.3 30 51-80 118-147 (271)
328 1zcj_A Peroxisomal bifunctiona 95.9 0.0089 3.1E-07 43.1 4.3 30 51-80 36-65 (463)
329 3lzw_A Ferredoxin--NADP reduct 95.9 0.0068 2.3E-07 40.1 3.4 30 51-80 153-182 (332)
330 1txg_A Glycerol-3-phosphate de 95.9 0.0078 2.7E-07 40.7 3.8 27 54-80 2-28 (335)
331 1pjc_A Protein (L-alanine dehy 95.9 0.0099 3.4E-07 41.5 4.3 29 52-80 167-195 (361)
332 3gpi_A NAD-dependent epimerase 95.8 0.012 4.3E-07 38.6 4.6 28 53-80 4-31 (286)
333 4dio_A NAD(P) transhydrogenase 95.8 0.0097 3.3E-07 42.8 4.3 30 51-80 189-218 (405)
334 4hv4_A UDP-N-acetylmuramate--L 95.8 0.0053 1.8E-07 44.5 3.0 31 50-80 20-51 (494)
335 4dna_A Probable glutathione re 95.8 0.01 3.6E-07 42.0 4.4 30 51-80 169-198 (463)
336 1vg0_A RAB proteins geranylger 95.8 0.0098 3.4E-07 45.1 4.5 29 52-80 8-36 (650)
337 1l7d_A Nicotinamide nucleotide 95.8 0.01 3.6E-07 41.7 4.3 30 51-80 171-200 (384)
338 4id9_A Short-chain dehydrogena 95.8 0.011 3.6E-07 39.9 4.2 32 49-80 16-48 (347)
339 1x13_A NAD(P) transhydrogenase 95.8 0.01 3.6E-07 42.1 4.3 30 51-80 171-200 (401)
340 1bg6_A N-(1-D-carboxylethyl)-L 95.8 0.0094 3.2E-07 40.5 3.9 28 53-80 5-32 (359)
341 1mv8_A GMD, GDP-mannose 6-dehy 95.8 0.0073 2.5E-07 43.0 3.4 27 54-80 2-28 (436)
342 2vns_A Metalloreductase steap3 95.7 0.013 4.5E-07 37.8 4.3 30 51-80 27-56 (215)
343 3p2y_A Alanine dehydrogenase/p 95.7 0.01 3.5E-07 42.4 4.1 30 51-80 183-212 (381)
344 3o0h_A Glutathione reductase; 95.7 0.013 4.4E-07 41.8 4.5 30 51-80 190-219 (484)
345 3k96_A Glycerol-3-phosphate de 95.7 0.01 3.5E-07 41.5 3.9 29 52-80 29-57 (356)
346 2ewd_A Lactate dehydrogenase,; 95.7 0.012 4.3E-07 40.1 4.2 28 53-80 5-33 (317)
347 3pef_A 6-phosphogluconate dehy 95.6 0.013 4.6E-07 39.1 4.2 28 53-80 2-29 (287)
348 2eez_A Alanine dehydrogenase; 95.6 0.014 4.7E-07 40.8 4.3 30 51-80 165-194 (369)
349 1m6i_A Programmed cell death p 95.6 0.012 4E-07 42.4 4.0 29 52-80 180-212 (493)
350 3mog_A Probable 3-hydroxybutyr 95.6 0.013 4.6E-07 42.6 4.3 28 53-80 6-33 (483)
351 1ps9_A 2,4-dienoyl-COA reducta 95.6 0.0053 1.8E-07 45.8 2.2 29 51-79 493-521 (671)
352 3phh_A Shikimate dehydrogenase 95.6 0.014 4.9E-07 39.7 4.2 29 52-80 118-146 (269)
353 3e8x_A Putative NAD-dependent 95.6 0.015 5.3E-07 37.2 4.2 31 50-80 19-50 (236)
354 2egg_A AROE, shikimate 5-dehyd 95.6 0.013 4.4E-07 40.0 4.0 30 51-80 140-170 (297)
355 2hjr_A Malate dehydrogenase; m 95.6 0.015 5.1E-07 40.2 4.3 28 53-80 15-43 (328)
356 1p77_A Shikimate 5-dehydrogena 95.6 0.0098 3.3E-07 39.9 3.2 30 51-80 118-147 (272)
357 3g0o_A 3-hydroxyisobutyrate de 95.5 0.015 5.2E-07 39.2 4.2 29 52-80 7-35 (303)
358 3ius_A Uncharacterized conserv 95.5 0.015 5.1E-07 38.1 3.9 28 53-80 6-33 (286)
359 3g79_A NDP-N-acetyl-D-galactos 95.5 0.01 3.5E-07 43.4 3.4 28 53-80 19-48 (478)
360 2vhw_A Alanine dehydrogenase; 95.5 0.016 5.5E-07 40.7 4.3 30 51-80 167-196 (377)
361 1cjc_A Protein (adrenodoxin re 95.5 0.013 4.6E-07 41.9 3.9 22 51-72 144-165 (460)
362 1o94_A Tmadh, trimethylamine d 95.5 0.011 3.6E-07 44.8 3.5 30 51-80 527-558 (729)
363 2pzm_A Putative nucleotide sug 95.4 0.022 7.4E-07 38.3 4.7 34 47-80 15-49 (330)
364 2v6b_A L-LDH, L-lactate dehydr 95.4 0.015 5.1E-07 39.7 3.9 27 54-80 2-30 (304)
365 4dll_A 2-hydroxy-3-oxopropiona 95.4 0.015 5.3E-07 39.6 3.9 30 51-80 30-59 (320)
366 1gte_A Dihydropyrimidine dehyd 95.4 0.017 5.8E-07 45.3 4.6 29 52-80 332-361 (1025)
367 3pdu_A 3-hydroxyisobutyrate de 95.4 0.014 4.9E-07 38.9 3.6 28 53-80 2-29 (287)
368 3zwc_A Peroxisomal bifunctiona 95.4 0.018 6.1E-07 44.2 4.4 32 50-81 314-345 (742)
369 3don_A Shikimate dehydrogenase 95.3 0.015 5.2E-07 39.6 3.7 30 51-80 116-146 (277)
370 3c7a_A Octopine dehydrogenase; 95.3 0.011 3.8E-07 41.3 2.9 27 54-80 4-31 (404)
371 1jw9_B Molybdopterin biosynthe 95.3 0.018 6.3E-07 38.2 3.8 30 51-80 30-60 (249)
372 1w4x_A Phenylacetone monooxyge 95.3 0.015 5.3E-07 42.2 3.7 31 50-80 184-214 (542)
373 4b4o_A Epimerase family protei 95.3 0.019 6.5E-07 38.0 3.9 27 54-80 2-29 (298)
374 3q2o_A Phosphoribosylaminoimid 95.3 0.022 7.5E-07 39.6 4.3 30 51-80 13-42 (389)
375 3tnl_A Shikimate dehydrogenase 95.2 0.022 7.6E-07 39.5 4.3 30 51-80 153-183 (315)
376 1jay_A Coenzyme F420H2:NADP+ o 95.2 0.018 6.1E-07 36.5 3.6 27 54-80 2-29 (212)
377 2h78_A Hibadh, 3-hydroxyisobut 95.2 0.016 5.5E-07 38.8 3.5 28 53-80 4-31 (302)
378 2gag_A Heterotetrameric sarcos 95.2 0.012 4.1E-07 45.9 3.2 29 52-80 284-312 (965)
379 3d4o_A Dipicolinate synthase s 95.2 0.024 8.1E-07 38.3 4.3 30 51-80 154-183 (293)
380 1i36_A Conserved hypothetical 95.2 0.021 7E-07 37.5 3.9 27 54-80 2-28 (264)
381 3tl2_A Malate dehydrogenase; c 95.2 0.024 8.2E-07 39.2 4.3 29 52-80 8-37 (315)
382 1leh_A Leucine dehydrogenase; 95.2 0.023 8E-07 40.1 4.3 30 51-80 172-201 (364)
383 3l9w_A Glutathione-regulated p 95.2 0.025 8.5E-07 40.4 4.5 29 52-80 4-32 (413)
384 3qha_A Putative oxidoreductase 95.2 0.016 5.4E-07 39.1 3.3 29 52-80 15-43 (296)
385 2rir_A Dipicolinate synthase, 95.2 0.025 8.6E-07 38.3 4.3 31 50-80 155-185 (300)
386 2qyt_A 2-dehydropantoate 2-red 95.2 0.015 5.2E-07 38.8 3.2 28 53-80 9-42 (317)
387 1lu9_A Methylene tetrahydromet 95.2 0.025 8.6E-07 37.9 4.3 30 51-80 118-148 (287)
388 1evy_A Glycerol-3-phosphate de 95.2 0.011 3.6E-07 40.9 2.4 27 54-80 17-43 (366)
389 4huj_A Uncharacterized protein 95.1 0.015 5.1E-07 37.6 3.0 29 52-80 23-51 (220)
390 3ego_A Probable 2-dehydropanto 95.1 0.02 6.7E-07 39.0 3.7 27 53-80 3-29 (307)
391 1dlj_A UDP-glucose dehydrogena 95.1 0.016 5.4E-07 41.0 3.3 26 54-80 2-27 (402)
392 1t2d_A LDH-P, L-lactate dehydr 95.1 0.026 9E-07 38.9 4.3 28 53-80 5-33 (322)
393 3l6d_A Putative oxidoreductase 95.1 0.033 1.1E-06 37.8 4.7 29 52-80 9-37 (306)
394 2hk9_A Shikimate dehydrogenase 95.1 0.02 6.9E-07 38.4 3.6 29 52-80 129-157 (275)
395 1y1p_A ARII, aldehyde reductas 95.1 0.038 1.3E-06 36.8 5.0 31 50-80 9-40 (342)
396 3vps_A TUNA, NAD-dependent epi 95.1 0.031 1E-06 36.9 4.5 29 52-80 7-36 (321)
397 3pwz_A Shikimate dehydrogenase 95.1 0.028 9.7E-07 38.1 4.3 30 51-80 119-149 (272)
398 2uyy_A N-PAC protein; long-cha 95.1 0.039 1.3E-06 37.2 5.0 29 52-80 30-58 (316)
399 3jyo_A Quinate/shikimate dehyd 95.1 0.029 9.8E-07 38.2 4.3 30 51-80 126-156 (283)
400 1yj8_A Glycerol-3-phosphate de 95.0 0.007 2.4E-07 42.1 1.2 28 53-80 22-56 (375)
401 3pid_A UDP-glucose 6-dehydroge 95.0 0.019 6.5E-07 41.5 3.5 27 53-80 37-63 (432)
402 1wdk_A Fatty oxidation complex 95.0 0.025 8.4E-07 43.0 4.2 30 51-80 313-342 (715)
403 3t4e_A Quinate/shikimate dehyd 95.0 0.029 9.9E-07 38.9 4.3 30 51-80 147-177 (312)
404 3h2s_A Putative NADH-flavin re 95.0 0.028 9.6E-07 35.4 3.9 27 54-80 2-29 (224)
405 2zyd_A 6-phosphogluconate dehy 95.0 0.026 8.8E-07 41.0 4.1 29 52-80 15-43 (480)
406 3fbt_A Chorismate mutase and s 94.9 0.025 8.7E-07 38.6 3.8 30 51-80 121-151 (282)
407 3ojo_A CAP5O; rossmann fold, c 94.9 0.021 7.2E-07 41.2 3.5 30 51-80 10-39 (431)
408 3ew7_A LMO0794 protein; Q8Y8U8 94.9 0.03 1E-06 35.0 3.9 27 54-80 2-29 (221)
409 3qsg_A NAD-binding phosphogluc 94.9 0.026 8.9E-07 38.4 3.8 29 52-80 24-53 (312)
410 1gpj_A Glutamyl-tRNA reductase 94.9 0.028 9.7E-07 39.7 4.1 30 51-80 166-196 (404)
411 2f1k_A Prephenate dehydrogenas 94.9 0.029 9.8E-07 37.1 3.9 27 54-80 2-28 (279)
412 2pv7_A T-protein [includes: ch 94.9 0.029 9.9E-07 37.9 4.0 29 52-80 21-50 (298)
413 1hdo_A Biliverdin IX beta redu 94.9 0.033 1.1E-06 34.4 4.0 28 53-80 4-32 (206)
414 1y6j_A L-lactate dehydrogenase 94.9 0.032 1.1E-06 38.4 4.2 25 52-76 7-31 (318)
415 1kjq_A GART 2, phosphoribosylg 94.9 0.036 1.2E-06 38.2 4.5 31 50-80 9-39 (391)
416 1a5z_A L-lactate dehydrogenase 94.9 0.026 8.9E-07 38.7 3.7 27 54-80 2-30 (319)
417 3ek2_A Enoyl-(acyl-carrier-pro 94.8 0.033 1.1E-06 36.2 4.0 33 48-80 10-45 (271)
418 3o8q_A Shikimate 5-dehydrogena 94.8 0.031 1.1E-06 38.0 4.0 30 51-80 125-155 (281)
419 2i6t_A Ubiquitin-conjugating e 94.8 0.031 1E-06 38.4 4.0 29 52-80 14-44 (303)
420 1yqg_A Pyrroline-5-carboxylate 94.8 0.029 9.9E-07 36.7 3.8 27 54-80 2-29 (263)
421 2f00_A UDP-N-acetylmuramate--L 94.8 0.028 9.4E-07 40.6 3.9 30 51-80 18-48 (491)
422 4ezb_A Uncharacterized conserv 94.8 0.027 9.4E-07 38.5 3.7 29 52-80 24-53 (317)
423 1ur5_A Malate dehydrogenase; o 94.8 0.033 1.1E-06 38.1 4.0 27 53-79 3-30 (309)
424 4e21_A 6-phosphogluconate dehy 94.7 0.034 1.2E-06 38.9 4.2 29 52-80 22-50 (358)
425 2z1m_A GDP-D-mannose dehydrata 94.7 0.036 1.2E-06 36.9 4.2 29 52-80 3-32 (345)
426 2g5c_A Prephenate dehydrogenas 94.7 0.034 1.2E-06 36.8 4.0 28 53-80 2-31 (281)
427 1nvt_A Shikimate 5'-dehydrogen 94.7 0.027 9.1E-07 37.9 3.5 29 51-80 127-155 (287)
428 3gvi_A Malate dehydrogenase; N 94.7 0.038 1.3E-06 38.4 4.3 29 52-80 7-36 (324)
429 3pqe_A L-LDH, L-lactate dehydr 94.7 0.039 1.3E-06 38.4 4.3 25 52-76 5-29 (326)
430 1p3d_A UDP-N-acetylmuramate--a 94.7 0.025 8.6E-07 40.6 3.4 30 51-80 17-47 (475)
431 3ldh_A Lactate dehydrogenase; 94.7 0.057 1.9E-06 37.8 5.1 30 51-80 20-51 (330)
432 4aj2_A L-lactate dehydrogenase 94.7 0.048 1.6E-06 38.0 4.7 27 50-76 17-43 (331)
433 1npy_A Hypothetical shikimate 94.6 0.039 1.3E-06 37.3 4.1 29 52-80 119-148 (271)
434 2p4q_A 6-phosphogluconate dehy 94.6 0.042 1.4E-06 40.1 4.5 29 52-80 10-38 (497)
435 3o38_A Short chain dehydrogena 94.6 0.029 1E-06 36.6 3.4 30 51-80 21-52 (266)
436 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.033 1.1E-06 37.8 3.7 28 53-80 2-31 (309)
437 1guz_A Malate dehydrogenase; o 94.6 0.037 1.3E-06 37.8 3.9 27 54-80 2-30 (310)
438 3orq_A N5-carboxyaminoimidazol 94.6 0.043 1.5E-06 38.2 4.3 30 51-80 11-40 (377)
439 4g65_A TRK system potassium up 94.6 0.016 5.3E-07 41.9 2.1 28 53-80 4-31 (461)
440 3ond_A Adenosylhomocysteinase; 94.6 0.04 1.4E-06 40.5 4.3 30 51-80 264-293 (488)
441 1vpd_A Tartronate semialdehyde 94.5 0.03 1E-06 37.2 3.4 28 53-80 6-33 (299)
442 2gf2_A Hibadh, 3-hydroxyisobut 94.5 0.035 1.2E-06 36.9 3.7 27 54-80 2-28 (296)
443 3ax6_A Phosphoribosylaminoimid 94.5 0.04 1.4E-06 38.0 4.0 28 53-80 2-29 (380)
444 1yb4_A Tartronic semialdehyde 94.5 0.028 9.6E-07 37.3 3.2 28 53-80 4-31 (295)
445 2o3j_A UDP-glucose 6-dehydroge 94.5 0.025 8.6E-07 41.0 3.1 28 53-80 10-39 (481)
446 1np3_A Ketol-acid reductoisome 94.5 0.05 1.7E-06 37.5 4.5 29 52-80 16-44 (338)
447 3vku_A L-LDH, L-lactate dehydr 94.5 0.044 1.5E-06 38.1 4.2 26 51-76 8-33 (326)
448 2ydy_A Methionine adenosyltran 94.5 0.04 1.4E-06 36.5 3.8 29 52-80 2-31 (315)
449 1lqt_A FPRA; NADP+ derivative, 94.5 0.036 1.2E-06 39.6 3.8 24 51-74 146-169 (456)
450 3ruf_A WBGU; rossmann fold, UD 94.5 0.048 1.7E-06 36.7 4.3 30 51-80 24-54 (351)
451 3c24_A Putative oxidoreductase 94.4 0.041 1.4E-06 36.7 3.8 28 53-80 12-40 (286)
452 3u62_A Shikimate dehydrogenase 94.4 0.055 1.9E-06 36.2 4.4 29 51-80 108-137 (253)
453 4gbj_A 6-phosphogluconate dehy 94.4 0.037 1.3E-06 37.6 3.7 29 52-80 5-33 (297)
454 3k30_A Histamine dehydrogenase 94.4 0.034 1.2E-06 41.6 3.7 30 51-80 522-553 (690)
455 3f9i_A 3-oxoacyl-[acyl-carrier 94.4 0.049 1.7E-06 35.2 4.0 33 48-80 10-43 (249)
456 2d5c_A AROE, shikimate 5-dehyd 94.4 0.058 2E-06 35.7 4.4 27 54-80 118-144 (263)
457 2q3e_A UDP-glucose 6-dehydroge 94.3 0.029 1E-06 40.3 3.1 28 53-80 6-35 (467)
458 3evt_A Phosphoglycerate dehydr 94.3 0.16 5.4E-06 35.3 6.7 32 49-80 134-165 (324)
459 3cky_A 2-hydroxymethyl glutara 94.3 0.043 1.5E-06 36.5 3.7 28 53-80 5-32 (301)
460 1x0v_A GPD-C, GPDH-C, glycerol 94.2 0.025 8.6E-07 38.6 2.5 28 53-80 9-43 (354)
461 3p7m_A Malate dehydrogenase; p 94.2 0.059 2E-06 37.3 4.3 29 52-80 5-34 (321)
462 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.2 0.053 1.8E-06 39.3 4.2 27 54-80 3-29 (478)
463 4e4t_A Phosphoribosylaminoimid 94.2 0.056 1.9E-06 38.3 4.3 30 51-80 34-63 (419)
464 2dwc_A PH0318, 433AA long hypo 94.2 0.071 2.4E-06 37.4 4.8 30 51-80 18-47 (433)
465 3ko8_A NAD-dependent epimerase 94.2 0.056 1.9E-06 35.7 4.0 27 54-80 2-29 (312)
466 3d1l_A Putative NADP oxidoredu 94.1 0.059 2E-06 35.4 4.0 28 53-80 11-39 (266)
467 3aw8_A PURK, phosphoribosylami 94.1 0.05 1.7E-06 37.4 3.8 27 54-80 1-27 (369)
468 3ce6_A Adenosylhomocysteinase; 94.1 0.057 2E-06 39.7 4.3 31 50-80 272-302 (494)
469 2dkn_A 3-alpha-hydroxysteroid 94.1 0.061 2.1E-06 34.3 4.0 28 53-80 2-30 (255)
470 2cvz_A Dehydrogenase, 3-hydrox 94.1 0.042 1.4E-06 36.3 3.3 26 54-80 3-28 (289)
471 2pgd_A 6-phosphogluconate dehy 94.1 0.057 1.9E-06 39.1 4.2 28 53-80 3-30 (482)
472 3ggo_A Prephenate dehydrogenas 94.1 0.057 1.9E-06 37.0 4.0 29 52-80 33-63 (314)
473 1oju_A MDH, malate dehydrogena 94.1 0.05 1.7E-06 37.3 3.7 27 54-80 2-30 (294)
474 1vl6_A Malate oxidoreductase; 94.1 0.057 1.9E-06 38.7 4.1 30 51-80 191-221 (388)
475 1c1d_A L-phenylalanine dehydro 94.1 0.063 2.1E-06 37.9 4.3 31 50-80 173-203 (355)
476 2aef_A Calcium-gated potassium 94.0 0.025 8.5E-07 36.6 2.0 28 52-80 9-36 (234)
477 3ktd_A Prephenate dehydrogenas 94.0 0.078 2.7E-06 37.0 4.7 29 52-80 8-36 (341)
478 3dhn_A NAD-dependent epimerase 94.0 0.041 1.4E-06 34.7 3.0 28 53-80 5-33 (227)
479 2b69_A UDP-glucuronate decarbo 94.0 0.067 2.3E-06 36.0 4.2 30 51-80 26-56 (343)
480 4a26_A Putative C-1-tetrahydro 93.9 0.056 1.9E-06 37.5 3.8 31 50-80 163-194 (300)
481 3vtz_A Glucose 1-dehydrogenase 93.9 0.056 1.9E-06 35.7 3.7 33 48-80 10-43 (269)
482 2gcg_A Glyoxylate reductase/hy 93.9 0.075 2.6E-06 36.6 4.4 31 50-80 153-183 (330)
483 3hn7_A UDP-N-acetylmuramate-L- 93.9 0.053 1.8E-06 39.6 3.8 30 51-80 18-48 (524)
484 3k5i_A Phosphoribosyl-aminoimi 93.9 0.064 2.2E-06 37.7 4.1 29 52-80 24-52 (403)
485 1edz_A 5,10-methylenetetrahydr 93.9 0.049 1.7E-06 38.0 3.5 31 50-80 175-206 (320)
486 2p4h_X Vestitone reductase; NA 93.9 0.071 2.4E-06 35.3 4.1 28 53-80 2-30 (322)
487 1ek6_A UDP-galactose 4-epimera 93.9 0.082 2.8E-06 35.4 4.5 28 53-80 3-31 (348)
488 2gas_A Isoflavone reductase; N 93.9 0.062 2.1E-06 35.4 3.8 29 52-80 2-31 (307)
489 1cyd_A Carbonyl reductase; sho 93.9 0.08 2.8E-06 33.8 4.2 30 51-80 6-36 (244)
490 3nkl_A UDP-D-quinovosamine 4-d 93.8 0.055 1.9E-06 32.2 3.2 28 51-78 3-31 (141)
491 3i6i_A Putative leucoanthocyan 93.8 0.079 2.7E-06 35.8 4.3 29 52-80 10-39 (346)
492 3d3w_A L-xylulose reductase; u 93.8 0.082 2.8E-06 33.8 4.2 30 51-80 6-36 (244)
493 4a5o_A Bifunctional protein fo 93.8 0.061 2.1E-06 37.1 3.7 31 50-80 159-190 (286)
494 3two_A Mannitol dehydrogenase; 93.8 0.079 2.7E-06 36.2 4.3 31 50-80 175-205 (348)
495 1pqw_A Polyketide synthase; ro 93.8 0.062 2.1E-06 33.6 3.5 30 51-80 38-68 (198)
496 2o7s_A DHQ-SDH PR, bifunctiona 93.8 0.058 2E-06 39.4 3.8 30 51-80 363-392 (523)
497 1sb8_A WBPP; epimerase, 4-epim 93.8 0.081 2.8E-06 35.7 4.3 29 52-80 27-56 (352)
498 2dvm_A Malic enzyme, 439AA lon 93.8 0.08 2.8E-06 38.4 4.5 30 51-80 185-217 (439)
499 2dbq_A Glyoxylate reductase; D 93.7 0.08 2.7E-06 36.6 4.3 31 50-80 148-178 (334)
500 1a4i_A Methylenetetrahydrofola 93.7 0.067 2.3E-06 37.2 3.8 31 50-80 163-194 (301)
No 1
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.86 E-value=4.9e-22 Score=143.65 Aligned_cols=80 Identities=41% Similarity=0.814 Sum_probs=72.3
Q ss_pred CccccCcc--chHHHhhcCCC-CCccchhhHHHHHHHhhHhhCCCCCCCCCccCCCcEEEECCCHHHHHHHHHHhHcCCC
Q psy11001 1 FTGRVCPA--PCEGACVLGIN-EPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGT 77 (81)
Q Consensus 1 ~~~riC~~--~C~~~C~~~~~-~~~i~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~ 77 (81)
||||+||+ |||.+|+++.. ++||.|+.+++++.+..+..+|..+..+.+.+.++|+||||||||+++|++|+++|++
T Consensus 68 ~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~ 147 (456)
T 2vdc_G 68 ICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYE 147 (456)
T ss_dssp HHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCC
T ss_pred cccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCe
Confidence 58999999 99999999987 9999999999999999888888765444446678999999999999999999999999
Q ss_pred eee
Q psy11001 78 ELI 80 (81)
Q Consensus 78 v~v 80 (81)
|+|
T Consensus 148 V~v 150 (456)
T 2vdc_G 148 VHV 150 (456)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 2
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.74 E-value=1.3e-18 Score=135.34 Aligned_cols=80 Identities=24% Similarity=0.355 Sum_probs=67.3
Q ss_pred CccccCcc--chHHHhhcCCC-CCccchhhHHHHHHHhhHhhCCCCCCCC--------CccCCCcEEEECCCHHHHHHHH
Q psy11001 1 FTGRVCPA--PCEGACVLGIN-EPAVTIKNIECAIIDHAFEQGWIKPEIP--------TLRTGKKVAIVGSGPSGLGAAH 69 (81)
Q Consensus 1 ~~~riC~~--~C~~~C~~~~~-~~~i~i~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~v~viG~G~aG~~~A~ 69 (81)
||||+||+ +|+.+|+++.. ++||+|+.+|+|+.++....+|.....| ...+.++|+||||||||+++|.
T Consensus 125 ~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~ 204 (1025)
T 1gte_A 125 TCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCAS 204 (1025)
T ss_dssp HHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHHHHHHH
T ss_pred hhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECccHHHHHHHH
Confidence 58999997 99999999874 6899999999999999877776532222 1135689999999999999999
Q ss_pred HHhHcCC-Ceee
Q psy11001 70 QLNKEAG-TELI 80 (81)
Q Consensus 70 ~L~~~g~-~v~v 80 (81)
+|+++|+ +|+|
T Consensus 205 ~L~~~G~~~Vtv 216 (1025)
T 1gte_A 205 FLARLGYSDITI 216 (1025)
T ss_dssp HHHHTTCCCEEE
T ss_pred HHHhcCCCcEEE
Confidence 9999999 6876
No 3
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.37 E-value=6.3e-14 Score=101.79 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=58.3
Q ss_pred CccccCcc---chHHHhhcCCCCCccchhhHHHHHHHhhHhhCCC---------CCCCCCccCCCcEEEECCCHHHHHHH
Q psy11001 1 FTGRVCPA---PCEGACVLGINEPAVTIKNIECAIIDHAFEQGWI---------KPEIPTLRTGKKVAIVGSGPSGLGAA 68 (81)
Q Consensus 1 ~~~riC~~---~C~~~C~~~~~~~~i~i~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~viG~G~aG~~~A 68 (81)
+|||+||+ +|+..|.+ ..+.++.+..++.+.........+. +.........++|+|||||++|+++|
T Consensus 30 ~~~rvc~~~~~l~~~~g~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA 108 (497)
T 2bry_A 30 LCQDVLSSFQGLCRALGVE-SGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAA 108 (497)
T ss_dssp SHHHHHHHHHHHHHHHTCC-TTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCC-CCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHH
Confidence 68999998 79999999 4677888888877654432211110 01111234568999999999999999
Q ss_pred HHHhHcCCCeee
Q psy11001 69 HQLNKEAGTELI 80 (81)
Q Consensus 69 ~~L~~~g~~v~v 80 (81)
..|+++|++|+|
T Consensus 109 ~~La~~G~~V~l 120 (497)
T 2bry_A 109 VELALLGARVVL 120 (497)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHCCCeEEE
Confidence 999999999987
No 4
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2.9e-11 Score=82.86 Aligned_cols=68 Identities=21% Similarity=0.160 Sum_probs=50.7
Q ss_pred ccccCccchHHHhhcCCCCCccchhhHHHHHHHhhHhhCCCCCCCCCccCCCcEEEECCCHHHHHHHHHHhH--cCCCee
Q psy11001 2 TGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGPSGLGAAHQLNK--EAGTEL 79 (81)
Q Consensus 2 ~~riC~~~C~~~C~~~~~~~~i~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~--~g~~v~ 79 (81)
|++.|++.++.++ ..+|+.+..+++++.++.+..- .+...++|+||||||||++||++|++ .|++|+
T Consensus 26 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~ 94 (326)
T 3fpz_A 26 LSDIVKKEDWSDF----KFAPIRESTVSRAMTSRYFKDL-------DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVC 94 (326)
T ss_dssp TTTTCCSTTCTTC----CCCCCCHHHHHHHHHHHHHHHH-------HHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEE
T ss_pred hhhhccccccccc----ccCCccHHHHHHHHHHHHHhhh-------hhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEE
Confidence 5666776555433 3468888889988887766542 12345789999999999999999975 599998
Q ss_pred e
Q psy11001 80 I 80 (81)
Q Consensus 80 v 80 (81)
|
T Consensus 95 v 95 (326)
T 3fpz_A 95 I 95 (326)
T ss_dssp E
T ss_pred E
Confidence 7
No 5
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.07 E-value=4.1e-11 Score=90.52 Aligned_cols=75 Identities=27% Similarity=0.402 Sum_probs=48.3
Q ss_pred cccCccchHHHhhcC-CCCCccchhhHHHHHHHhhHhhCCCCCCCCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 3 GRVCPAPCEGACVLG-INEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 3 ~riC~~~C~~~C~~~-~~~~~i~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.|.|++ |+. |.+. ..+++..+-.++.+.. ......|.+...+.....++|+|||||+||+++|..|+++|++|+|
T Consensus 342 ~~~ci~-Cn~-C~~~~~~~~~~~~C~~n~~~g-~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtl 417 (729)
T 1o94_A 342 IRVCIG-CNV-CISRWEIGGPPMICTQNATAG-EEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHL 417 (729)
T ss_dssp CCCCCC-CCH-HHHHHHHSSSCCCCSSCTTTT-THHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccccc-cch-hcccccccCCceeeccCcccc-ccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 478998 885 9865 3333333333332222 1222334322222334568999999999999999999999999987
No 6
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.07 E-value=2.2e-10 Score=88.44 Aligned_cols=72 Identities=25% Similarity=0.234 Sum_probs=58.6
Q ss_pred chHHHhhcCCCCCccchhhHHHHHHHhhHhh-CCCCCC-CCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 9 PCEGACVLGINEPAVTIKNIECAIIDHAFEQ-GWIKPE-IPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 9 ~C~~~C~~~~~~~~i~i~~l~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.|...|.+...++|+.|..+++|+.+..+.+ ++.... .+.....++|+|||+|++||++|++|+++|++|+|
T Consensus 233 ~~~~~~~r~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v 306 (852)
T 2xag_A 233 ATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTL 306 (852)
T ss_dssp HHHHHCCTTTTSCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCCcccCCcHHHHHHHHHHHHHHHHhcCcccccCCcccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 4788899999999999999999999877654 332221 22234568999999999999999999999999987
No 7
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.05 E-value=1.6e-10 Score=72.51 Aligned_cols=28 Identities=32% Similarity=0.507 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+||||||||+++|+.|+++|++|+|
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v 30 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHL 30 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 5799999999999999999999999987
No 8
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.04 E-value=2.2e-10 Score=85.64 Aligned_cols=72 Identities=25% Similarity=0.252 Sum_probs=58.3
Q ss_pred chHHHhhcCCCCCccchhhHHHHHHHhhHhh-CCCCC-CCCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 9 PCEGACVLGINEPAVTIKNIECAIIDHAFEQ-GWIKP-EIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 9 ~C~~~C~~~~~~~~i~i~~l~~~~~~~~~~~-~~~~~-~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.|..++.|...++|+.|..+++++.+..+.+ ++... ..+.....++|+|||+|++|+++|+.|+++|++|+|
T Consensus 62 ~~~~~~~r~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~ 135 (662)
T 2z3y_A 62 ATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTL 135 (662)
T ss_dssp HHHHHSCTTGGGCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccCChHHHHHHHHHHHHHHHHhcCCccccCCCcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 5777788888899999999999999877654 43332 122335668999999999999999999999999987
No 9
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.90 E-value=5.7e-10 Score=82.16 Aligned_cols=75 Identities=23% Similarity=0.457 Sum_probs=56.4
Q ss_pred ccccCccchHHHhhcCCCCCccchhhHHHHHHHhhHhhCCCCCCCCC--------------ccCCCcEEEECCCHHHHHH
Q psy11001 2 TGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPT--------------LRTGKKVAIVGSGPSGLGA 67 (81)
Q Consensus 2 ~~riC~~~C~~~C~~~~~~~~i~i~~l~~~~~~~~~~~~~~~~~~~~--------------~~~~~~v~viG~G~aG~~~ 67 (81)
+|++ +| .+|.+...+.++.+...+.+..+......|..+..+. +...++|+|||+|++|+++
T Consensus 66 ~g~v---~C-~~Ch~~~~~~~~~c~~ch~~~~d~p~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~a 141 (572)
T 1d4d_A 66 IGEI---AC-TSCHKGHEKSVAYCDACHSFGFDMPFGGKWERKFVPVDADKAAQDKAIAAGVKETTDVVIIGSGGAGLAA 141 (572)
T ss_dssp CSCC---CG-GGTSCSSSCCCCGGGGTCCCCCCCTTCCCCCCCCCCTTSSHHHHHHHHHSCCCEECSEEEECCSHHHHHH
T ss_pred CCCC---Cc-ccccccccCCCCcccccccccccCCCccccccCCccccccHHHHHHHhhccCCCCCCEEEECCCHHHHHH
Confidence 3555 79 8999998888888888887654444444565433221 1235699999999999999
Q ss_pred HHHHhHcCCCeee
Q psy11001 68 AHQLNKEAGTELI 80 (81)
Q Consensus 68 A~~L~~~g~~v~v 80 (81)
|+.|+++|++|+|
T Consensus 142 a~~~~~~g~~v~~ 154 (572)
T 1d4d_A 142 AVSARDAGAKVIL 154 (572)
T ss_dssp HHHHHSSSCCEEE
T ss_pred HHHHHHCCCcEEE
Confidence 9999999999987
No 10
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.87 E-value=4.6e-10 Score=84.11 Aligned_cols=32 Identities=34% Similarity=0.546 Sum_probs=29.3
Q ss_pred ccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
....++|+|||||+||+++|+.|+++|++|+|
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~l 419 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVL 419 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 34568999999999999999999999999987
No 11
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.77 E-value=4.6e-09 Score=71.66 Aligned_cols=29 Identities=34% Similarity=0.418 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+||||||||+++|+.|+++|++|+|
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v 32 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLM 32 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 37899999999999999999999999987
No 12
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.70 E-value=2.1e-08 Score=72.92 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=47.6
Q ss_pred CCCCCccchhhHHHHHHHhhHhhCCC---CCCCCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 17 GINEPAVTIKNIECAIIDHAFEQGWI---KPEIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 17 ~~~~~~i~i~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++++.|..+++++.+.....+.. ....+.....++|+|||||++|+++|..|++.|++|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~l 71 (523)
T 1mo9_A 5 NARNDHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLI 71 (523)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHCTTCCCEEEECCTTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccccchhhccchhhhhHHHhhccccchhhhccCCCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 35789999999987777655442211 11112234457999999999999999999999999987
No 13
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.70 E-value=9e-09 Score=73.35 Aligned_cols=28 Identities=29% Similarity=0.444 Sum_probs=27.1
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
|+|+|||||++||+||++|+++|++|+|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~V 29 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLL 29 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEE
Confidence 6899999999999999999999999987
No 14
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.67 E-value=1.6e-08 Score=68.22 Aligned_cols=29 Identities=28% Similarity=0.477 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+||||||||++||++|+|+|++|+|
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~l 34 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIAL 34 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 47999999999999999999999999987
No 15
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.66 E-value=1.8e-08 Score=67.50 Aligned_cols=29 Identities=31% Similarity=0.433 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+||||||||++||.+|+++|++|+|
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~l 32 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVM 32 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 47899999999999999999999999986
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.62 E-value=2.1e-08 Score=67.43 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=28.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||||++|+++|..|+++|++|+|
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~v 50 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPIL 50 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 4568999999999999999999999999987
No 17
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.62 E-value=2.7e-08 Score=67.02 Aligned_cols=29 Identities=28% Similarity=0.510 Sum_probs=27.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+||||||||+++|.+|+++|++|+|
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~l 34 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVM 34 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 58999999999999999999999999987
No 18
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.59 E-value=3.7e-08 Score=68.74 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=27.8
Q ss_pred ccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+.++|+|||||++|+++|+.|+++|++|+|
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v 51 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDV 51 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 34568999999999999999999999999987
No 19
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.58 E-value=8.1e-09 Score=72.46 Aligned_cols=61 Identities=23% Similarity=0.269 Sum_probs=45.3
Q ss_pred CCccchhhHHHHHHHhhHhhCCCCCCCCC--c-----------------cCCCcEEEECCCHHHHHHHHHHhHc--CCCe
Q psy11001 20 EPAVTIKNIECAIIDHAFEQGWIKPEIPT--L-----------------RTGKKVAIVGSGPSGLGAAHQLNKE--AGTE 78 (81)
Q Consensus 20 ~~~i~i~~l~~~~~~~~~~~~~~~~~~~~--~-----------------~~~~~v~viG~G~aG~~~A~~L~~~--g~~v 78 (81)
.-.+++..+++++.++.....|..+..+. . ...++|+|||+|++|+++|+.|+++ |++|
T Consensus 14 ~~~v~~~~~er~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V 93 (326)
T 2gjc_A 14 QLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93 (326)
T ss_dssp --CGGGSCCCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCE
T ss_pred ccccchHHHHHHHHHHHHhcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeE
Confidence 34677777999988887777775433211 0 1124899999999999999999999 9998
Q ss_pred ee
Q psy11001 79 LI 80 (81)
Q Consensus 79 ~v 80 (81)
+|
T Consensus 94 ~v 95 (326)
T 2gjc_A 94 CI 95 (326)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 20
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.58 E-value=3.6e-08 Score=67.73 Aligned_cols=28 Identities=36% Similarity=0.437 Sum_probs=26.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-||+||||||+|+++|..|+++|++|+|
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v 29 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTI 29 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEE
Confidence 3799999999999999999999999987
No 21
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.58 E-value=1.2e-08 Score=76.22 Aligned_cols=31 Identities=29% Similarity=0.447 Sum_probs=28.7
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||||+||+++|..|+++|++|+|
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~l 401 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTL 401 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 4568999999999999999999999999987
No 22
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.56 E-value=3.3e-08 Score=70.25 Aligned_cols=31 Identities=39% Similarity=0.685 Sum_probs=27.7
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
....+|+|||||++||+||++|+++ |++|+|
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~V 39 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMI 39 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEE
Confidence 3457999999999999999999985 999987
No 23
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.51 E-value=7.2e-08 Score=66.23 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=28.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||||++|+++|++|+++|++|+|
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~l 45 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTAL 45 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEE
Confidence 3457999999999999999999999999987
No 24
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.51 E-value=1.6e-07 Score=66.80 Aligned_cols=62 Identities=19% Similarity=0.291 Sum_probs=42.4
Q ss_pred chHHHhhcCCC------CCccchhhHHHHHHHhhHhhCCCCCCCCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 9 PCEGACVLGIN------EPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 9 ~C~~~C~~~~~------~~~i~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.|+..|++... .+++.+...+. + ..++ . +.....++|+|||||++|+++|+.|+++|++|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~----~~~~--~---~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~V 72 (376)
T 2e1m_A 5 TYEQLARELLLVGPAPTNEDLKLRYLDV-L----IDNG--L---NPPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTI 72 (376)
T ss_dssp HHHHHHHHHHTBCCTTTCCBHHHHHHHH-H----HTSC--S---SSCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhhhccCcccCCCCCChhHHHH-H----Hhcc--C---CCCCCCceEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 68999998765 33333322221 1 1112 1 2223467999999999999999999999999987
No 25
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.49 E-value=1.1e-07 Score=63.35 Aligned_cols=30 Identities=30% Similarity=0.492 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||+||+++|..|+++|++|+|
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 32 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVV 32 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEE
Confidence 347999999999999999999999999987
No 26
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.47 E-value=1.3e-07 Score=64.14 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|++|+++|++|+|
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~v 32 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLV 32 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999987
No 27
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.44 E-value=1.4e-07 Score=65.72 Aligned_cols=28 Identities=29% Similarity=0.434 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|++|+++|++|+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~v 28 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEV 28 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEE
Confidence 4799999999999999999999999987
No 28
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.44 E-value=2.2e-07 Score=68.81 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|+.|+++|++|+|
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~V 135 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPII 135 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 347999999999999999999999999987
No 29
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.43 E-value=2e-07 Score=62.87 Aligned_cols=28 Identities=32% Similarity=0.507 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|+.|++.|++|+|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~v 30 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHL 30 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEE
Confidence 5899999999999999999999999987
No 30
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.42 E-value=1.8e-07 Score=61.78 Aligned_cols=28 Identities=36% Similarity=0.464 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|+++|++|+|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~l 30 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILL 30 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 6899999999999999999999999987
No 31
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.42 E-value=4e-08 Score=72.21 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+||||||||+++|..|+++|++|+|
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~l 135 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAV 135 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEE
Confidence 357999999999999999999999999987
No 32
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.42 E-value=1.8e-07 Score=64.35 Aligned_cols=28 Identities=36% Similarity=0.446 Sum_probs=26.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|+.|+++|++|+|
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l 32 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLM 32 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 6899999999999999999999999987
No 33
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.42 E-value=1.9e-07 Score=62.24 Aligned_cols=29 Identities=34% Similarity=0.390 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 43 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLV 43 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEE
Confidence 47999999999999999999999999987
No 34
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.40 E-value=1.8e-07 Score=65.14 Aligned_cols=29 Identities=34% Similarity=0.444 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v 33 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKI 33 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 36899999999999999999999999987
No 35
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.40 E-value=2.9e-07 Score=64.26 Aligned_cols=30 Identities=33% Similarity=0.613 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
..++|+|||||++|+++|++|+++| ++|+|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v 35 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTI 35 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEE
Confidence 3478999999999999999999999 89987
No 36
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.39 E-value=2.2e-07 Score=65.06 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=26.4
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|++|+++|++|+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~v 28 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIV 28 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 3799999999999999999999999987
No 37
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.39 E-value=3.1e-07 Score=64.51 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.++|+|||||++|+++|++|+++|+ +|+|
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~v 35 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTV 35 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEE
Confidence 4789999999999999999999999 8887
No 38
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.39 E-value=2.4e-07 Score=62.08 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||+||+++|..|+++|++|+|
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 35 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKI 35 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 46899999999999999999999999987
No 39
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.39 E-value=1.7e-07 Score=66.51 Aligned_cols=30 Identities=27% Similarity=0.415 Sum_probs=27.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+||||||+|+++|+.|+++|++|+|
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~v 50 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTV 50 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEE
Confidence 347899999999999999999999999987
No 40
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.39 E-value=2.1e-07 Score=65.03 Aligned_cols=28 Identities=36% Similarity=0.497 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|+.|+++|++|+|
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~v 29 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLL 29 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 5799999999999999999999999987
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.38 E-value=2.9e-07 Score=63.83 Aligned_cols=28 Identities=36% Similarity=0.617 Sum_probs=26.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||||++|+++|++|+++|++|+|
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~v 32 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLV 32 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 6899999999999999999999999987
No 42
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.37 E-value=3e-07 Score=64.10 Aligned_cols=29 Identities=31% Similarity=0.366 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v 33 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDV 33 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999987
No 43
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.37 E-value=4.4e-07 Score=66.50 Aligned_cols=30 Identities=27% Similarity=0.437 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|||+|+||+++|+.|+++|++|+|
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~v 154 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVIL 154 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 357999999999999999999999999987
No 44
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.37 E-value=3.2e-07 Score=65.36 Aligned_cols=30 Identities=30% Similarity=0.543 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++||++|+.|+++|++|+|
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v 39 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTV 39 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 357999999999999999999999999987
No 45
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.37 E-value=3.4e-07 Score=62.94 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|++|+++|++|+|
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~l 33 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTV 33 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 46899999999999999999999999987
No 46
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.37 E-value=3.4e-07 Score=62.89 Aligned_cols=29 Identities=34% Similarity=0.479 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||||++|+++|++|+++|++|+|
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~v 34 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHI 34 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 46899999999999999999999999987
No 47
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.36 E-value=4.2e-07 Score=59.63 Aligned_cols=29 Identities=31% Similarity=0.311 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|.+|+|
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~l 31 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGL 31 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 36899999999999999999999999987
No 48
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.36 E-value=2.2e-07 Score=65.66 Aligned_cols=28 Identities=29% Similarity=0.557 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
++|+|||||++||++|++|+++|+ +|+|
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~v 32 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVL 32 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEE
Confidence 589999999999999999999999 8887
No 49
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.36 E-value=3.6e-07 Score=62.76 Aligned_cols=29 Identities=34% Similarity=0.508 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||||++|+++|++|+++|++|+|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~v 31 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLL 31 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999987
No 50
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.36 E-value=3.3e-07 Score=63.47 Aligned_cols=28 Identities=43% Similarity=0.653 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|+++|++|+|
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v 30 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVI 30 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 5899999999999999999999999987
No 51
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.36 E-value=2.7e-07 Score=63.13 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||||++|+++|++|+++|++|+|
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~v 30 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLM 30 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 5899999999999999999999999987
No 52
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.35 E-value=2.2e-07 Score=63.47 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=27.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||||++|+++|++|+ +|++|+|
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~v 36 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVV 36 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEE
Confidence 34689999999999999999999 6999987
No 53
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.33 E-value=3.8e-07 Score=65.66 Aligned_cols=29 Identities=31% Similarity=0.449 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~v 32 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVV 32 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 36899999999999999999999999987
No 54
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.33 E-value=6.3e-07 Score=68.64 Aligned_cols=57 Identities=25% Similarity=0.343 Sum_probs=39.6
Q ss_pred chhhHHHHHHHhhHhhC-CC-----CCCCCCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 24 TIKNIECAIIDHAFEQG-WI-----KPEIPTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 24 ~i~~l~~~~~~~~~~~~-~~-----~~~~~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+..+++++.+..+.+. +. ....+.....++|+|||+|++|+++|+.|+++|++|+|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v 364 (776)
T 4gut_A 302 EVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTV 364 (776)
T ss_dssp HHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 44566667666654321 10 01122334568999999999999999999999999987
No 55
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.33 E-value=4.3e-07 Score=62.87 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~v 39 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRL 39 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 47999999999999999999999999987
No 56
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.33 E-value=4.5e-07 Score=62.58 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=28.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhH-cC-CCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNK-EA-GTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~-~g-~~v~v 80 (81)
....+|+|||||++|+++|++|++ +| ++|+|
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~v 51 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAV 51 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEE
Confidence 345799999999999999999999 99 99987
No 57
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.32 E-value=3.9e-07 Score=63.53 Aligned_cols=29 Identities=38% Similarity=0.571 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v 54 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSV 54 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 46999999999999999999999999987
No 58
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.32 E-value=1.9e-07 Score=65.42 Aligned_cols=29 Identities=38% Similarity=0.504 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC------CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA------GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g------~~v~v 80 (81)
.++|+|||||++|+++|++|+++| ++|+|
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~v 39 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTL 39 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEE
Confidence 468999999999999999999999 89887
No 59
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.32 E-value=5.6e-07 Score=67.39 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=28.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|++|+++|++|+|
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~v 292 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTL 292 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEE
Confidence 357999999999999999999999999987
No 60
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.32 E-value=5.1e-07 Score=63.19 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCC-eee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGT-ELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~-v~v 80 (81)
.++|+|||||++|+++|..|+++|++ |+|
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v 33 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTL 33 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 36899999999999999999999999 987
No 61
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.32 E-value=4.2e-07 Score=61.20 Aligned_cols=29 Identities=31% Similarity=0.382 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~l 44 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAI 44 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999887
No 62
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.32 E-value=4.4e-07 Score=61.09 Aligned_cols=28 Identities=32% Similarity=0.490 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|+++|++|+|
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~v 31 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVI 31 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 6899999999999999999999999987
No 63
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.31 E-value=4.4e-07 Score=63.03 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~v 34 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVV 34 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEE
Confidence 36899999999999999999999999987
No 64
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.31 E-value=3.8e-07 Score=61.15 Aligned_cols=29 Identities=31% Similarity=0.456 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 33 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVL 33 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 36899999999999999999999999876
No 65
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.31 E-value=5.1e-07 Score=64.45 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=27.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|+.|+++|++|+|
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~l 55 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLV 55 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 357999999999999999999999999987
No 66
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.31 E-value=4.7e-07 Score=61.12 Aligned_cols=29 Identities=38% Similarity=0.557 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~l 36 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLI 36 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 47899999999999999999999999886
No 67
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=5.5e-07 Score=64.33 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|+.|+++|++|+|
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~v 39 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLH 39 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 47899999999999999999999999987
No 68
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.30 E-value=4.6e-07 Score=60.59 Aligned_cols=28 Identities=36% Similarity=0.412 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||+|++|+++|..|+++|++|+|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~l 29 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGL 29 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 5899999999999999999999999876
No 69
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.30 E-value=4.2e-07 Score=65.58 Aligned_cols=29 Identities=41% Similarity=0.611 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
.++|+|||||+|||+||+.|+++| ++|+|
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~V 37 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLV 37 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEE
Confidence 368999999999999999999999 99987
No 70
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.30 E-value=5.7e-07 Score=65.26 Aligned_cols=30 Identities=27% Similarity=0.474 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|||+||+|+++|..|+++|++|+|
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~v 39 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVV 39 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 347899999999999999999999999987
No 71
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.30 E-value=4.4e-07 Score=64.24 Aligned_cols=29 Identities=41% Similarity=0.703 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v 44 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVL 44 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 47899999999999999999999999987
No 72
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.30 E-value=5.6e-07 Score=64.65 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~l 53 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAV 53 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 47999999999999999999999999987
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.30 E-value=5.2e-07 Score=60.93 Aligned_cols=29 Identities=31% Similarity=0.374 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 33 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRF 33 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 36899999999999999999999999887
No 74
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.30 E-value=4e-07 Score=64.71 Aligned_cols=29 Identities=34% Similarity=0.415 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~v 34 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILL 34 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 36899999999999999999999999987
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.29 E-value=4.7e-07 Score=61.53 Aligned_cols=30 Identities=30% Similarity=0.483 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+++|..|+++|++|+|
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~l 42 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLV 42 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 457999999999999999999999999876
No 76
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.29 E-value=5.7e-07 Score=65.24 Aligned_cols=30 Identities=30% Similarity=0.496 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+||||||+|+++|..|+++|++|+|
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~v 40 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMV 40 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 457999999999999999999999999987
No 77
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.29 E-value=6.3e-07 Score=61.37 Aligned_cols=29 Identities=31% Similarity=0.431 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~l 42 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRI 42 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEE
Confidence 47899999999999999999999999987
No 78
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.28 E-value=5.5e-07 Score=60.76 Aligned_cols=29 Identities=31% Similarity=0.445 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~l 36 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLL 36 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 36899999999999999999999999886
No 79
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.28 E-value=6.2e-07 Score=66.87 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|++|+++|++|+|
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~v 300 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTL 300 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 347999999999999999999999999987
No 80
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.28 E-value=5.6e-07 Score=63.33 Aligned_cols=29 Identities=48% Similarity=0.690 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|++|+++|++|+|
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v 33 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAV 33 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 46899999999999999999999999987
No 81
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.28 E-value=7.3e-07 Score=63.64 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~l 31 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTAL 31 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEE
Confidence 47999999999999999999999999987
No 82
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.27 E-value=6.4e-07 Score=59.90 Aligned_cols=28 Identities=29% Similarity=0.525 Sum_probs=26.4
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
++|+|||+|++|+++|..|+++|+ +|+|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~l 30 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVL 30 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEE
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEE
Confidence 579999999999999999999999 9876
No 83
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.27 E-value=8e-07 Score=63.33 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|+.|+++|++|+|
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~l 54 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLL 54 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEE
Confidence 447999999999999999999999999987
No 84
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.27 E-value=6.2e-07 Score=63.93 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=27.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||+|++|+++|++|+++|++|+|
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v 67 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLL 67 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEE
Confidence 6999999999999999999999999987
No 85
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.27 E-value=6.7e-07 Score=64.21 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~l 54 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAI 54 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEE
Confidence 47999999999999999999999999987
No 86
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.27 E-value=7.6e-07 Score=55.74 Aligned_cols=28 Identities=43% Similarity=0.579 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++++|||+|++|+.+|..|++.|.+|++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~l 29 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLV 29 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 5799999999999999999999999987
No 87
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=6.7e-07 Score=64.75 Aligned_cols=29 Identities=31% Similarity=0.455 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||||++|+++|+.|+++|++|+|
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~v 33 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLV 33 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 46899999999999999999999999987
No 88
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.24 E-value=7.3e-07 Score=61.95 Aligned_cols=28 Identities=36% Similarity=0.498 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.+|+|||||++|+++|..|+++ |++|+|
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v 30 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDI 30 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEE
Confidence 3799999999999999999999 999987
No 89
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.24 E-value=9.1e-07 Score=63.12 Aligned_cols=30 Identities=37% Similarity=0.449 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|+.|+++|++|+|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~v 61 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTV 61 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 357999999999999999999999999987
No 90
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.24 E-value=7.5e-07 Score=63.52 Aligned_cols=29 Identities=38% Similarity=0.551 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v 41 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTV 41 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 47999999999999999999999999987
No 91
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.23 E-value=8.6e-07 Score=60.46 Aligned_cols=28 Identities=39% Similarity=0.598 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
++|+|||||++|+++|..|++.|+ +|+|
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~l 33 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVII 33 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEE
Confidence 689999999999999999999999 8876
No 92
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.23 E-value=7.3e-07 Score=64.48 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~l 35 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLL 35 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEE
Confidence 47899999999999999999999999987
No 93
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.22 E-value=9.6e-07 Score=65.63 Aligned_cols=29 Identities=41% Similarity=0.520 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~L 51 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTI 51 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEE
Confidence 47999999999999999999999999987
No 94
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.22 E-value=1.2e-06 Score=61.95 Aligned_cols=29 Identities=34% Similarity=0.399 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.++|+|||+|++|+++|+.|+++ |++|+|
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~L 109 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITI 109 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEE
Confidence 47899999999999999999998 999887
No 95
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.22 E-value=5.6e-07 Score=61.43 Aligned_cols=28 Identities=29% Similarity=0.287 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
++|+|||||++|+++|+.|++ .|++|+|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v 32 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAV 32 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEE
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEE
Confidence 479999999999999999999 9999887
No 96
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.21 E-value=9.1e-07 Score=63.11 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|+++|++|+|
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~l 33 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAI 33 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEE
Confidence 47899999999999999999999999987
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.21 E-value=1.2e-06 Score=62.13 Aligned_cols=28 Identities=32% Similarity=0.432 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|+.|+++|++|+|
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~v 32 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTV 32 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEE
Confidence 6899999999999999999999999987
No 98
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.21 E-value=1.2e-06 Score=61.74 Aligned_cols=29 Identities=28% Similarity=0.357 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++ |++|+|
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v 36 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLV 36 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEE
Confidence 47899999999999999999999 999987
No 99
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.21 E-value=1.1e-06 Score=62.94 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|..|++.|++|+|
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~l 37 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVAC 37 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 457999999999999999999999999987
No 100
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.21 E-value=8.5e-07 Score=62.22 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.++|+|||||++|+++|++|+++ |++|+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~v 66 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLL 66 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEE
Confidence 46899999999999999999999 999987
No 101
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.21 E-value=8.1e-07 Score=65.12 Aligned_cols=30 Identities=23% Similarity=0.482 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|||+|++|+++|+.|+++|++|+|
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~v 149 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVIL 149 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 456899999999999999999999999987
No 102
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.20 E-value=1.1e-06 Score=64.41 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=28.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
...++|+|||||+||+++|..|+++ |++|+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~v 66 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIM 66 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEE
Confidence 4467999999999999999999999 888886
No 103
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.20 E-value=1e-06 Score=62.46 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC--CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA--GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g--~~v~v 80 (81)
.++|+|||||++|+++|++|+++| ++|+|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v 34 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITL 34 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEE
Confidence 368999999999999999999999 99887
No 104
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.20 E-value=1.4e-06 Score=61.06 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
++|+|||+|+||+++|..|+++|+ +|+|
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~l 31 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIAL 31 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEE
Confidence 689999999999999999999999 6765
No 105
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.19 E-value=1e-06 Score=59.44 Aligned_cols=29 Identities=34% Similarity=0.530 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++ |++|+|
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~v 68 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAI 68 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEE
Confidence 46899999999999999999997 999987
No 106
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.19 E-value=8.4e-07 Score=60.65 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=25.5
Q ss_pred cEEEECCCHHHHHHHHHHhHcC------CCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEA------GTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g------~~v~v 80 (81)
+|+|||||++|+++|++|+++| ++|+|
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~v 34 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKV 34 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEE
Confidence 7999999999999999999998 88886
No 107
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.19 E-value=1.4e-06 Score=62.36 Aligned_cols=30 Identities=17% Similarity=0.379 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|..|+++|++|+|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~l 48 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAV 48 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 357999999999999999999999999987
No 108
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.18 E-value=1.4e-06 Score=63.41 Aligned_cols=30 Identities=33% Similarity=0.392 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+||||||||+++|.+|+++|++|+|
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~l 240 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGL 240 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEE
Confidence 357899999999999999999999999876
No 109
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.18 E-value=1.6e-06 Score=61.98 Aligned_cols=31 Identities=32% Similarity=0.368 Sum_probs=28.4
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||||++|+++|++|+++|++|+|
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v 57 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLI 57 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEE
Confidence 3457999999999999999999999999987
No 110
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.18 E-value=1.4e-06 Score=61.86 Aligned_cols=29 Identities=41% Similarity=0.606 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
.++|+|||||++|+++|..|++.|+ +|+|
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v 36 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTL 36 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEE
Confidence 4799999999999999999999999 8876
No 111
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.18 E-value=1.6e-06 Score=61.89 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~l 32 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTL 32 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 47899999999999999999999999887
No 112
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.17 E-value=1.4e-06 Score=64.29 Aligned_cols=30 Identities=33% Similarity=0.482 Sum_probs=26.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|+.|+++|++|+|
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~V 77 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALV 77 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 347999999999999999999999999987
No 113
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.16 E-value=1.6e-06 Score=61.90 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~l 30 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTAC 30 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 36899999999999999999999999987
No 114
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.16 E-value=1.5e-06 Score=63.08 Aligned_cols=29 Identities=31% Similarity=0.415 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
.++|+|||||++|+++|+.|++ .|++|+|
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~l 36 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITL 36 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 4689999999999999999999 9999987
No 115
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.16 E-value=1.7e-06 Score=62.51 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|++|+++|++|+|
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~l 31 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLM 31 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEE
Confidence 36899999999999999999999999987
No 116
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.16 E-value=9.7e-07 Score=62.22 Aligned_cols=29 Identities=34% Similarity=0.442 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
.++|+|||||++|+++|++|+++| ++|+|
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~v 52 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLV 52 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEE
Confidence 468999999999999999999999 99987
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.16 E-value=1.9e-06 Score=61.33 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+++|..|++.|++|+|
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~l 34 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTC 34 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 357899999999999999999999999987
No 118
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.15 E-value=1.5e-06 Score=62.96 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||+|++|+++|+.|+++|++|+|
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~v 69 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLV 69 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 46899999999999999999999999987
No 119
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.15 E-value=1.7e-06 Score=63.24 Aligned_cols=29 Identities=31% Similarity=0.526 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+||||||+|+++|..|+++|++|+|
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~v 54 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLV 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 36899999999999999999999999987
No 120
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.14 E-value=1.7e-06 Score=61.86 Aligned_cols=28 Identities=29% Similarity=0.465 Sum_probs=26.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|++.|++|+|
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~l 32 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLM 32 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 6899999999999999999999999987
No 121
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.14 E-value=1.6e-06 Score=62.32 Aligned_cols=30 Identities=17% Similarity=0.355 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||++|+++|..|++.|++|+|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~l 34 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAV 34 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 347999999999999999999999999987
No 122
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.13 E-value=1.9e-06 Score=62.12 Aligned_cols=29 Identities=17% Similarity=0.369 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
.++|+|||||++|+++|+.|++ .|++|+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~l 32 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAV 32 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEE
Confidence 4789999999999999999999 9999987
No 123
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.13 E-value=1.8e-06 Score=61.58 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~l 33 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTAC 33 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 36899999999999999999999999987
No 124
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.12 E-value=2.1e-06 Score=62.76 Aligned_cols=29 Identities=34% Similarity=0.407 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
.++|+|||||++|+++|+.|++ .|++|+|
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~l 56 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITL 56 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEE
Confidence 5789999999999999999999 9999987
No 125
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.12 E-value=2e-06 Score=60.10 Aligned_cols=28 Identities=36% Similarity=0.373 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++++|||||++|+++|+.|+++|++|+|
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v 29 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLV 29 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEE
Confidence 4799999999999999999999999987
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.12 E-value=1.8e-06 Score=60.60 Aligned_cols=30 Identities=33% Similarity=0.417 Sum_probs=27.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCC--eee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGT--ELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~--v~v 80 (81)
..++|+|||+|+||+++|..|+++|++ |+|
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~l 39 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLV 39 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEE
Confidence 347899999999999999999999998 665
No 127
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.12 E-value=1.3e-06 Score=62.81 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
++|+|||||++|+++|+.|++ .|++|+|
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~l 33 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTL 33 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 589999999999999999999 9999987
No 128
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.12 E-value=2e-06 Score=61.30 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|++.|++|+|
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~l 31 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAI 31 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 6899999999999999999999999987
No 129
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=2.5e-06 Score=60.66 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|++.|++|+|
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~l 31 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTI 31 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 6899999999999999999999999987
No 130
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.11 E-value=2.4e-06 Score=59.43 Aligned_cols=29 Identities=31% Similarity=0.503 Sum_probs=25.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
+|||+|||||+||+++|.+|++.+. +|+|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtl 32 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTL 32 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEE
Confidence 6899999999999999999999886 4554
No 131
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.10 E-value=2.5e-06 Score=61.11 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~l 32 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVAL 32 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEE
Confidence 47899999999999999999999999987
No 132
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.10 E-value=3e-06 Score=61.59 Aligned_cols=30 Identities=23% Similarity=0.425 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+||+|+++|..|++.|++|+|
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~l 60 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMV 60 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 357999999999999999999999999987
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=2.4e-06 Score=60.76 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=26.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||+|++|+++|..|++.|++|+|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~l 29 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGV 29 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEE
Confidence 5899999999999999999999999987
No 134
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.10 E-value=2.3e-06 Score=63.23 Aligned_cols=29 Identities=38% Similarity=0.555 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc------CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE------AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~------g~~v~v 80 (81)
.++|+|||||+||+++|+.|++. |++|+|
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~v 69 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCL 69 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEE
Confidence 47999999999999999999999 999987
No 135
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.10 E-value=2.1e-06 Score=60.02 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=26.3
Q ss_pred CcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
++|+|||||++|+++|.+|++ .|++|+|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~v 32 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKV 32 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 579999999999999999999 8999987
No 136
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.10 E-value=1.9e-06 Score=62.14 Aligned_cols=29 Identities=31% Similarity=0.590 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+||||||+|+++|..|++.|++|+|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~l 36 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVL 36 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEE
Confidence 37999999999999999999999999987
No 137
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=2.6e-06 Score=60.87 Aligned_cols=29 Identities=24% Similarity=0.397 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||||++|+++|..|++.|++|+|
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~l 33 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVL 33 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 47899999999999999999999999987
No 138
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=2.3e-06 Score=61.40 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~l 39 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLL 39 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEE
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEE
Confidence 47899999999999999999999999987
No 139
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.09 E-value=2e-06 Score=62.36 Aligned_cols=29 Identities=24% Similarity=0.232 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhH------------cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK------------EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~------------~g~~v~v 80 (81)
.++|+|||||+||+++|..|++ .|++|+|
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~l 47 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITL 47 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEE
Confidence 4689999999999999999999 9999987
No 140
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.08 E-value=2.6e-06 Score=62.69 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=27.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|+.|+++|++|+|
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~L 46 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGL 46 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEE
Confidence 47999999999999999999999999987
No 141
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.08 E-value=2.6e-06 Score=60.86 Aligned_cols=29 Identities=28% Similarity=0.397 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~l 34 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVC 34 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999987
No 142
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=3.2e-06 Score=61.05 Aligned_cols=28 Identities=18% Similarity=0.458 Sum_probs=26.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||||++|+++|..|++.|++|+|
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~l 30 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVAL 30 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 6899999999999999999999999987
No 143
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.07 E-value=3.2e-06 Score=59.72 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=26.3
Q ss_pred CcEEEECCCHHHHHHHHHHhH--cCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNK--EAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~--~g~~v~v 80 (81)
++|+|||||++|+++|.+|++ .|++|+|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtl 32 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITL 32 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEE
Confidence 689999999999999999999 7899887
No 144
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.07 E-value=2.3e-06 Score=61.12 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
++|+|||||++|+++|..|+++ |++|+|
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtv 33 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTM 33 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEE
Confidence 6899999999999999999999 899887
No 145
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.07 E-value=2.3e-06 Score=62.29 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.7
Q ss_pred CCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 47 PTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 47 ~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
|....+++|+|||||+||+++|..|++++++|+|
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtL 70 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSI 70 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEE
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEE
Confidence 3344567999999999999999999999999987
No 146
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.06 E-value=3.4e-06 Score=60.82 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=25.7
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|||+|++|+++|+.|+++|++|+|
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~v 27 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTL 27 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 589999999999999999999999987
No 147
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.06 E-value=3e-06 Score=63.12 Aligned_cols=29 Identities=41% Similarity=0.486 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
..+|+||||||+|+++|+.|++ .|++|+|
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~v 61 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCI 61 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999 9999987
No 148
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.06 E-value=2.7e-06 Score=60.66 Aligned_cols=29 Identities=10% Similarity=0.201 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~l 32 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCAL 32 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999987
No 149
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.05 E-value=2.9e-06 Score=61.34 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
.++|+|||||++|+++|..|++ .|++|+|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~l 36 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAV 36 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEE
Confidence 4789999999999999999999 9999987
No 150
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.05 E-value=4.4e-06 Score=60.32 Aligned_cols=29 Identities=38% Similarity=0.645 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
.++|+|||||++|+++|++|+++| ++|+|
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v 38 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHL 38 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999999999999 78876
No 151
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.05 E-value=3.6e-06 Score=63.69 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||+||+++|+.|+++|.+|+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlL 56 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLL 56 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEE
Confidence 357999999999999999999999999987
No 152
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.05 E-value=3.4e-06 Score=59.30 Aligned_cols=28 Identities=39% Similarity=0.464 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|++|+++|+.|+++|++|+|
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v 31 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHI 31 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 5899999999999999999999999987
No 153
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.05 E-value=3e-06 Score=60.24 Aligned_cols=28 Identities=25% Similarity=0.356 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
++|+|||||+||+++|..|+++ |++|+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~v 32 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISL 32 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEE
Confidence 5899999999999999999999 888886
No 154
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.05 E-value=3.5e-06 Score=59.81 Aligned_cols=29 Identities=31% Similarity=0.473 Sum_probs=26.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.++|+|||||+||+++|..|++. |++|+|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~v 33 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKV 33 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEE
Confidence 36899999999999999999998 778876
No 155
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.05 E-value=4.1e-06 Score=61.74 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|++|+++|++|+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~L 60 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGL 60 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 47899999999999999999999999987
No 156
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.04 E-value=4e-06 Score=61.00 Aligned_cols=28 Identities=29% Similarity=0.373 Sum_probs=26.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|||+|+||+.+|++|+++|++|+|
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~l 29 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRL 29 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEE
Confidence 5799999999999999999999999987
No 157
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.04 E-value=3.4e-06 Score=60.49 Aligned_cols=29 Identities=31% Similarity=0.447 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~l 34 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAI 34 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999987
No 158
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.04 E-value=4.2e-06 Score=58.93 Aligned_cols=28 Identities=32% Similarity=0.459 Sum_probs=25.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCC--eee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGT--ELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~--v~v 80 (81)
++|+|||+|+||+++|..|+++|++ |+|
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~l 32 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISL 32 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEE
Confidence 5899999999999999999999998 665
No 159
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.04 E-value=4.2e-06 Score=63.22 Aligned_cols=30 Identities=20% Similarity=0.363 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||+||+++|+.|++.|.+|+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlL 55 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAM 55 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 357999999999999999999999999987
No 160
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.03 E-value=4e-06 Score=63.35 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||||+||+++|+.|+++|.+|+|
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlL 49 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLL 49 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEE
Confidence 457999999999999999999999999987
No 161
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.02 E-value=4.6e-06 Score=59.87 Aligned_cols=28 Identities=25% Similarity=0.595 Sum_probs=26.4
Q ss_pred CcEEEECCCHHHHHHHHHHhH---cCCC---eee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNK---EAGT---ELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~---~g~~---v~v 80 (81)
++|+|||||++|+++|..|++ .|++ |+|
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v 36 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVC 36 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEE
Confidence 689999999999999999999 9999 876
No 162
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.02 E-value=3.9e-06 Score=60.00 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|++.|++|+|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~l 34 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLA 34 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 36899999999999999999999999987
No 163
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.02 E-value=3.7e-06 Score=60.98 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=25.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
++|+|||||+||+++|..|+++ |++|+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~l 31 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIM 31 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEE
Confidence 5899999999999999999999 788876
No 164
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.01 E-value=4.2e-06 Score=61.02 Aligned_cols=29 Identities=31% Similarity=0.340 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~i 44 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHV 44 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEE
Confidence 46999999999999999999999999887
No 165
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.01 E-value=2.9e-06 Score=60.02 Aligned_cols=29 Identities=31% Similarity=0.320 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-----CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-----GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-----~~v~v 80 (81)
.++|+|||+|++|+++|..|++.| ++|+|
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~l 63 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLF 63 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEE
Confidence 468999999999999999999999 88876
No 166
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.01 E-value=4.6e-06 Score=61.81 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||||+||+++|+.|+++|++|+|
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~v 35 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCAL 35 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 46899999999999999999999999987
No 167
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.00 E-value=4.7e-06 Score=62.39 Aligned_cols=29 Identities=28% Similarity=0.343 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||+|+||+++|+.|+++|++|+|
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~v 46 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTAC 46 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEE
Confidence 46999999999999999999999999987
No 168
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.99 E-value=5.4e-06 Score=63.15 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|+|||||++|+++|++|+++|+ +|+|
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~v 33 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITV 33 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEE
Confidence 4689999999999999999999998 8887
No 169
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.99 E-value=3.2e-06 Score=60.86 Aligned_cols=28 Identities=25% Similarity=0.471 Sum_probs=26.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHc---CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE---AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~---g~~v~v 80 (81)
++|+|||||++|+++|..|++. |++|+|
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~l 33 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTV 33 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEE
Confidence 6899999999999999999999 999887
No 170
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.99 E-value=4.7e-06 Score=58.65 Aligned_cols=31 Identities=26% Similarity=0.477 Sum_probs=27.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++.||+|||||+||+++|..|++.+++|+|
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itl 37 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITM 37 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEE
Confidence 4557999999999999999999888999887
No 171
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.98 E-value=5.5e-06 Score=58.71 Aligned_cols=28 Identities=25% Similarity=0.396 Sum_probs=24.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcC--CCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEA--GTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g--~~v~v 80 (81)
++|+|||||+||+++|..|++.+ ++|+|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~Vtl 32 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITL 32 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEE
Confidence 68999999999999999999987 56665
No 172
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.97 E-value=7e-06 Score=58.36 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|..|+++|++|+|
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~ 34 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLH 34 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEE
Confidence 46899999999999999999999999987
No 173
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.96 E-value=3.2e-06 Score=64.56 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=27.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcC--------CCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEA--------GTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g--------~~v~v 80 (81)
..++|+|||+|++||++|++|+++| ++|+|
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v 92 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQI 92 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEE
Confidence 3478999999999999999999999 88876
No 174
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.96 E-value=5.6e-06 Score=62.35 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||||.||+++|+.|+++|++|+|
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~v 33 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIV 33 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEE
Confidence 36899999999999999999999999987
No 175
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.96 E-value=7.5e-06 Score=57.68 Aligned_cols=30 Identities=13% Similarity=0.233 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCC--eee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGT--ELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~--v~v 80 (81)
..++|+|||+|++|+++|..|+++|++ |+|
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~l 37 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITV 37 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEE
Confidence 357899999999999999999999985 665
No 176
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.95 E-value=6.4e-06 Score=59.32 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=26.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcC--CCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEA--GTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g--~~v~v 80 (81)
..++|+|||+|++|+.+|..|+++| ++|+|
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~v 36 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDI 36 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEE
Confidence 3579999999999999999999999 88876
No 177
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.95 E-value=5.5e-06 Score=60.94 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~i 49 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRA 49 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999887
No 178
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.95 E-value=6.8e-06 Score=61.66 Aligned_cols=29 Identities=41% Similarity=0.440 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-----cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-----EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-----~g~~v~v 80 (81)
..+|+||||||+|+++|..|++ .|++|+|
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~v 41 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRI 41 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEE
Confidence 4689999999999999999999 9999987
No 179
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.94 E-value=7.9e-06 Score=60.05 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||||++|+++|..|++.|++|+|
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~i 37 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLG 37 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999886
No 180
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.94 E-value=5e-06 Score=58.89 Aligned_cols=29 Identities=24% Similarity=0.465 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhH---cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK---EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~---~g~~v~v 80 (81)
.++|+|||||++|+++|..|++ .|++|+|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtl 35 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTL 35 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEE
Confidence 3689999999999999999999 8999987
No 181
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.94 E-value=7.3e-06 Score=60.93 Aligned_cols=29 Identities=31% Similarity=0.412 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC--CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA--GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g--~~v~v 80 (81)
..+|+|||+|+||+++|+.|+++| ++|+|
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~v 35 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIAL 35 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEE
Confidence 368999999999999999999999 99887
No 182
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.93 E-value=6.2e-06 Score=60.48 Aligned_cols=28 Identities=32% Similarity=0.508 Sum_probs=26.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||+|+||+++|+.|++ |++|+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~v 35 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIV 35 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEE
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEE
Confidence 4689999999999999999999 999987
No 183
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.93 E-value=6.8e-06 Score=58.33 Aligned_cols=28 Identities=25% Similarity=0.202 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
++|+|||||++|+++|..|++. |++|+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~l 30 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTA 30 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEE
Confidence 4799999999999999999999 999886
No 184
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.92 E-value=8.3e-06 Score=57.88 Aligned_cols=29 Identities=28% Similarity=0.393 Sum_probs=26.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
.++|+|||+|++|+++|..|+++|+ +|+|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~l 34 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRL 34 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEE
Confidence 4789999999999999999999998 5665
No 185
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.92 E-value=8.7e-06 Score=56.60 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=23.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCC
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGT 77 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~ 77 (81)
.++|+|||||+||+++|..|+++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~ 29 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGE 29 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCC
Confidence 37899999999999999999999965
No 186
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.92 E-value=8.4e-06 Score=57.99 Aligned_cols=29 Identities=41% Similarity=0.643 Sum_probs=26.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.++|+|||+|++|+++|+.|+++|+ +|+|
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~ 33 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLI 33 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEE
Confidence 4689999999999999999999998 7876
No 187
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.92 E-value=7e-06 Score=61.29 Aligned_cols=29 Identities=34% Similarity=0.376 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|.+|++.|++|+|
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~l 74 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAM 74 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999987
No 188
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.91 E-value=6.9e-06 Score=58.53 Aligned_cols=28 Identities=25% Similarity=0.391 Sum_probs=24.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCC--eee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGT--ELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~--v~v 80 (81)
+||+|||||+||+++|..|++.|++ |+|
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~l 30 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIII 30 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEE
Confidence 4799999999999999999999964 554
No 189
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.91 E-value=6e-06 Score=59.40 Aligned_cols=29 Identities=41% Similarity=0.362 Sum_probs=26.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-c------CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-E------AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~------g~~v~v 80 (81)
.++|+||||||||+++|..|++ + |++|+|
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~l 38 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDM 38 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEE
Confidence 4689999999999999999999 7 898876
No 190
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=7.1e-06 Score=57.21 Aligned_cols=29 Identities=41% Similarity=0.676 Sum_probs=25.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++.+++|||+|+||+++|..|++.| +|+|
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~l 35 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTV 35 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEE
Confidence 4578999999999999999999999 8876
No 191
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.89 E-value=8.9e-06 Score=57.66 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
++|+|||+|++|+++|..|++. |++|+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~l 30 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQW 30 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEE
Confidence 3799999999999999999998 888886
No 192
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.88 E-value=8.3e-06 Score=59.87 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHh-HcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLN-KEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~-~~g~~v~v 80 (81)
..+|+|||||++|+++|..|+ +.|++|+|
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~v 37 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVG 37 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEE
Confidence 368999999999999999999 99999886
No 193
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.88 E-value=1e-05 Score=61.00 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc------CCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE------AGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~------g~~v~v 80 (81)
...+|+|||||+||+++|+.|+++ |++|+|
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~v 56 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILL 56 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEE
Confidence 347999999999999999999998 999987
No 194
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.87 E-value=9.6e-06 Score=63.14 Aligned_cols=29 Identities=31% Similarity=0.646 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+||||+++|..|++.|++|+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~l 156 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVML 156 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEE
Confidence 47899999999999999999999999987
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.86 E-value=8.5e-06 Score=58.85 Aligned_cols=30 Identities=20% Similarity=0.401 Sum_probs=26.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
..++|+|||+|+||+++|..|+++ |++|+|
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~l 41 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLI 41 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEE
Confidence 357899999999999999999988 778876
No 196
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.85 E-value=1.1e-05 Score=60.18 Aligned_cols=30 Identities=30% Similarity=0.374 Sum_probs=27.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHh---H-cCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLN---K-EAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~---~-~g~~v~v 80 (81)
...+|+|||||+||+++|+.|+ + +|.+|+|
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~v 54 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTL 54 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEE
Confidence 3468999999999999999999 6 8999987
No 197
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.82 E-value=1.1e-05 Score=58.07 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC---CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA---GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g---~~v~v 80 (81)
.++|+|||+|++|+++|..|+++| ++|+|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~l 66 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVV 66 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEE
Confidence 479999999999999999999998 88876
No 198
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.80 E-value=1.5e-05 Score=57.14 Aligned_cols=29 Identities=21% Similarity=0.399 Sum_probs=26.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.++|+|||+|++|+++|..|++. |++|+|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~l 66 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVT 66 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEE
Confidence 36899999999999999999997 888876
No 199
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.78 E-value=2e-05 Score=57.35 Aligned_cols=30 Identities=37% Similarity=0.547 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+.+|..|++.|++|+|
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~Vlv 35 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLL 35 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 457999999999999999999999999987
No 200
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.78 E-value=1e-05 Score=58.48 Aligned_cols=28 Identities=43% Similarity=0.627 Sum_probs=26.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|||+|++|+++|.+|++. ++|+|
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~v 135 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVAL 135 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEE
Confidence 46899999999999999999999 99887
No 201
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.76 E-value=1.8e-05 Score=58.41 Aligned_cols=29 Identities=21% Similarity=0.520 Sum_probs=27.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.|+++|||+||+|+++|..+++.|.+|.|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kVal 70 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLL 70 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 47999999999999999999999999987
No 202
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.75 E-value=2e-05 Score=57.58 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+++|+.|+++|++|+|
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~ 48 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILV 48 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 347999999999999999999999999987
No 203
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.51 E-value=6.7e-05 Score=53.82 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
.++++|||||+||+..|..|++ .|++|+|
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLv 46 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLL 46 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEE
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEE
Confidence 6899999999999999999997 7789987
No 204
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.34 E-value=0.0001 Score=53.91 Aligned_cols=28 Identities=32% Similarity=0.382 Sum_probs=26.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||||.||+.+|..|++ |.+|+|
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~Vlv 53 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLV 53 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEE
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEE
Confidence 4799999999999999999999 999987
No 205
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.33 E-value=0.00018 Score=48.18 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|+|
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtl 173 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTI 173 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 47999999999999999999999999987
No 206
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.33 E-value=0.00017 Score=52.20 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+.+|..|++.|++|+|
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~ 33 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLM 33 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999886
No 207
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.33 E-value=0.00012 Score=53.00 Aligned_cols=27 Identities=26% Similarity=0.340 Sum_probs=23.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCC
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGT 77 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~ 77 (81)
.-++|+|||+||+||++|..|.+.|..
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~ 64 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDP 64 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCC
Confidence 447899999999999999999987754
No 208
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.32 E-value=0.00029 Score=43.30 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=28.0
Q ss_pred ccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.....+|+|+|+|..|...|..|.+.|++|++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~v 47 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVV 47 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 34567999999999999999999999998875
No 209
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.29 E-value=0.00019 Score=51.43 Aligned_cols=30 Identities=33% Similarity=0.364 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||.|.+|+++|..|+++|++|++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~ 37 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTV 37 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEE
Confidence 468999999999999999999999999975
No 210
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.28 E-value=0.00022 Score=47.39 Aligned_cols=30 Identities=27% Similarity=0.428 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|..|+..|..|++.|.+|++
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~ 180 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVII 180 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeee
Confidence 357999999999999999999999999987
No 211
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.28 E-value=0.00022 Score=51.75 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+.+|..|++.|++|.|
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~ 39 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQI 39 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 347999999999999999999999999886
No 212
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=97.28 E-value=0.0002 Score=51.10 Aligned_cols=30 Identities=30% Similarity=0.446 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||.|.+|+++|..|+++|++|++
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~ 33 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRV 33 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEE
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEE
Confidence 357899999999999999999999999875
No 213
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.27 E-value=0.00053 Score=41.56 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=28.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
....+++|+|.|..|...|..|.+.|++|++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~v 35 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVV 35 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEE
Confidence 3456899999999999999999999999876
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.17 E-value=0.00039 Score=49.16 Aligned_cols=30 Identities=27% Similarity=0.405 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+.+|..|++.|.+|++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtl 177 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTV 177 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 457999999999999999999999999886
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.17 E-value=0.00038 Score=48.89 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+.+|..|++.|.+|++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtv 174 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASI 174 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 47899999999999999999999999986
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.13 E-value=0.0004 Score=49.49 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+.+|..|++.|.+|++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 199 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSV 199 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 57999999999999999999999999886
No 217
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.11 E-value=0.0003 Score=52.22 Aligned_cols=30 Identities=33% Similarity=0.403 Sum_probs=27.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
..++++|||||.||+.+|..|++.| .+|+|
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLl 35 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLI 35 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEE
Confidence 3489999999999999999999998 68876
No 218
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.09 E-value=0.00059 Score=48.36 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+.+|..|++.|.+|++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~l 195 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIV 195 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 47899999999999999999999999876
No 219
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.04 E-value=0.00061 Score=48.26 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+.+|..|++.|.+|++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 198 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTI 198 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 57999999999999999999999999886
No 220
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.03 E-value=0.00061 Score=48.59 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+.+|..|++.|.+|+|
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 197 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTL 197 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 47999999999999999999999999986
No 221
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.03 E-value=0.00094 Score=40.09 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|+|+|..|...|..|.++|++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~ 34 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLA 34 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 46899999999999999999999999876
No 222
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.02 E-value=0.00044 Score=50.69 Aligned_cols=29 Identities=24% Similarity=0.396 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
.++++|||+|++|+.+|..|++. |++|+|
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~ 42 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVAL 42 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEE
Confidence 47999999999999999999998 899876
No 223
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.99 E-value=0.00088 Score=39.56 Aligned_cols=28 Identities=21% Similarity=0.337 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|+|+|..|...|..|.+.|++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~ 32 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVL 32 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 5799999999999999999999998875
No 224
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.98 E-value=0.00072 Score=48.10 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 211 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTV 211 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 57999999999999999999999999986
No 225
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.97 E-value=0.00035 Score=51.27 Aligned_cols=31 Identities=23% Similarity=0.485 Sum_probs=28.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|.+|+..|..|++.|.+|++
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv 206 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTV 206 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEE
Confidence 4568999999999999999999999999876
No 226
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.97 E-value=0.00078 Score=38.68 Aligned_cols=29 Identities=21% Similarity=0.262 Sum_probs=26.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
.++|+|+|+|..|...+..|.+.| ++|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 468999999999999999999999 87764
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.96 E-value=0.00089 Score=46.38 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 173 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDV 173 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 57999999999999999999999999886
No 228
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.95 E-value=0.00059 Score=50.51 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
..++++|||+|++|+++|..|++ .|++|+|
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~ 53 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLV 53 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEE
Confidence 34799999999999999999999 8999886
No 229
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.95 E-value=0.00091 Score=45.33 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+..|..|++.|.+|++
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~l 194 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIAL 194 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEE
Confidence 356999999999999999999999999876
No 230
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.93 E-value=0.0008 Score=48.16 Aligned_cols=31 Identities=32% Similarity=0.269 Sum_probs=28.4
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|.+|+..|..|++.|.+|++
T Consensus 195 ~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~l 225 (464)
T 2xve_A 195 FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLI 225 (464)
T ss_dssp GTTSEEEEECCSTTHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEE
Confidence 3568999999999999999999999999876
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.93 E-value=0.00066 Score=47.18 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|++|+..|..|++.|.+|++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 171 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKL 171 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 37899999999999999999999999886
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.93 E-value=0.00095 Score=46.86 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 173 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSL 173 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 57999999999999999999999999886
No 233
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.92 E-value=0.0013 Score=38.94 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=26.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|+|+|..|...|..|.+.|++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~ 34 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLA 34 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 46799999999999999999999998875
No 234
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.91 E-value=0.00063 Score=50.64 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=26.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
..++++|||||.||+.+|..|++. +++|+|
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLl 48 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLV 48 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEE
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEE
Confidence 458999999999999999999975 788886
No 235
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.88 E-value=0.0011 Score=47.54 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtl 222 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVL 222 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 357999999999999999999999999886
No 236
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.88 E-value=0.0011 Score=47.07 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 195 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHL 195 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 47999999999999999999999999886
No 237
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.88 E-value=0.0016 Score=39.77 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+++|+|+|..|...|..|.+.|++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~v 31 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTV 31 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 46899999999999999999999999876
No 238
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.86 E-value=0.001 Score=47.00 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=28.1
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCC-eee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGT-ELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~-v~v 80 (81)
...++|+|||+|.+|+..|..|++.|.+ |++
T Consensus 210 ~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l 241 (447)
T 2gv8_A 210 FVGESVLVVGGASSANDLVRHLTPVAKHPIYQ 241 (447)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTTSCSSEEE
T ss_pred cCCCEEEEEccCcCHHHHHHHHHHHhCCcEEE
Confidence 3568999999999999999999999998 775
No 239
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.86 E-value=0.0018 Score=40.53 Aligned_cols=30 Identities=30% Similarity=0.365 Sum_probs=27.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
...+|+|+|.|..|...|..|.+. |++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~v 68 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLG 68 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEE
Confidence 456899999999999999999999 999876
No 240
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.85 E-value=0.0013 Score=46.98 Aligned_cols=29 Identities=31% Similarity=0.399 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtl 194 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTV 194 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 47999999999999999999999999886
No 241
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.83 E-value=0.00056 Score=50.71 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=26.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
.++++|||+|.||+..|..|++ .|++|+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~Vll 31 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLV 31 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEE
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEE
Confidence 3689999999999999999998 7899886
No 242
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.82 E-value=0.0012 Score=43.86 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+..|..|++.|.+|++
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 171 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYL 171 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 358999999999999999999999998876
No 243
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.80 E-value=0.0016 Score=47.79 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|..|+.+|..|++.|.+|++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 314 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTV 314 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 46899999999999999999999999886
No 244
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.79 E-value=0.00049 Score=50.54 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=28.3
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|++|+..|..|++.+.+|++
T Consensus 183 ~~~krV~VIG~G~tgve~a~~la~~~~~Vtv 213 (545)
T 3uox_A 183 FTGKRVGVIGTGATGVQIIPIAAETAKELYV 213 (545)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHTTTBSEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHHhhCCEEEE
Confidence 4568999999999999999999999998876
No 245
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.78 E-value=0.0015 Score=45.63 Aligned_cols=29 Identities=28% Similarity=0.200 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|||+|..|...|..+++.|++|++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l 34 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKL 34 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEE
Confidence 46899999999999999999999999987
No 246
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.77 E-value=0.0012 Score=47.17 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtl 213 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDV 213 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 57999999999999999999999999886
No 247
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.76 E-value=0.0011 Score=47.38 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+.+|..|++.|.+|++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 214 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRM 214 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 457999999999999999999999999876
No 248
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.75 E-value=0.0016 Score=46.08 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtl 177 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTL 177 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 57999999999999999999999999876
No 249
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.74 E-value=0.0019 Score=42.97 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=29.3
Q ss_pred ccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-.+++|+|||+|..|...+..|.+.|.+|+|
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtV 59 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITV 59 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 34678999999999999999999999999987
No 250
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.74 E-value=0.0017 Score=46.70 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtl 202 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKV 202 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 357999999999999999999999999886
No 251
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.73 E-value=0.0015 Score=46.33 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 199 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTI 199 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 57999999999999999999999999886
No 252
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.73 E-value=0.0015 Score=46.44 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 206 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTA 206 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 47999999999999999999999999886
No 253
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.73 E-value=0.0014 Score=45.07 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHH-HHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLG-AAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~-~A~~L~~~g~~v~v 80 (81)
..++|.+||.|.+|++ +|..|.++|++|++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~ 33 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSG 33 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEE
Confidence 3478999999999997 78999999999975
No 254
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.72 E-value=0.0019 Score=47.68 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=27.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|||||+.|+..|..+++.|.+|+|
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTi 251 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTV 251 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 347899999999999999999999999987
No 255
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.72 E-value=0.0013 Score=43.60 Aligned_cols=30 Identities=37% Similarity=0.546 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+..|..|++.|.+|++
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 172 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTL 172 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEE
Confidence 357999999999999999999999988876
No 256
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.71 E-value=0.0018 Score=45.43 Aligned_cols=29 Identities=28% Similarity=0.291 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtv 171 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTI 171 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 57999999999999999999999999876
No 257
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.69 E-value=0.002 Score=45.58 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 176 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTM 176 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 457999999999999999999999999876
No 258
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.69 E-value=0.0015 Score=43.67 Aligned_cols=30 Identities=30% Similarity=0.457 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+..|..|++.|.+|++
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtl 180 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTV 180 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 357999999999999999999999999876
No 259
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.68 E-value=0.0013 Score=46.59 Aligned_cols=29 Identities=21% Similarity=0.353 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 205 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTV 205 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 57999999999999999999999999886
No 260
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.67 E-value=0.0016 Score=43.24 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+..|..|++.|.+|++
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtl 173 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHL 173 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 457999999999999999999999999876
No 261
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.66 E-value=0.0016 Score=43.52 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|.+|+..|..|++.|.+|++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~l 187 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYI 187 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEE
Confidence 457999999999999999999999999876
No 262
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.0021 Score=46.00 Aligned_cols=29 Identities=28% Similarity=0.369 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 213 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHL 213 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEE
Confidence 47999999999999999999999999886
No 263
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.61 E-value=0.0019 Score=43.56 Aligned_cols=30 Identities=23% Similarity=0.407 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+..|..|++.|.+|++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l 183 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTL 183 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEE
Confidence 458999999999999999999999999876
No 264
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.61 E-value=0.0022 Score=45.86 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 226 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTV 226 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999999999999999886
No 265
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.59 E-value=0.0019 Score=46.50 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=27.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 204 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYI 204 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEE
Confidence 57999999999999999999999999886
No 266
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.58 E-value=0.002 Score=42.83 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=28.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++++|||+|++|+..|..|++.|.+|++
T Consensus 171 ~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~ 201 (338)
T 3itj_A 171 FRNKPLAVIGGGDSACEEAQFLTKYGSKVFM 201 (338)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 3467999999999999999999999998876
No 267
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.57 E-value=0.0023 Score=45.44 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 204 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTV 204 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 57999999999999999999999999876
No 268
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.57 E-value=0.0025 Score=46.08 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 179 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTL 179 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEE
Confidence 56999999999999999999999999876
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.56 E-value=0.003 Score=45.78 Aligned_cols=29 Identities=21% Similarity=0.098 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtl 238 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTV 238 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 46799999999999999999999999986
No 270
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.55 E-value=0.0031 Score=45.13 Aligned_cols=30 Identities=20% Similarity=0.140 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 213 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTV 213 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEE
Confidence 346899999999999999999999999986
No 271
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.55 E-value=0.0024 Score=45.46 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 215 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSL 215 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 47999999999999999999999999886
No 272
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.55 E-value=0.0017 Score=44.48 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=28.7
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++|+|||+|..|...+..|.+.|.+|+|
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtV 41 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTL 41 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEE
Confidence 3568999999999999999999999999987
No 273
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.55 E-value=0.0023 Score=45.40 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 175 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTL 175 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCccee
Confidence 46899999999999999999999999986
No 274
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.54 E-value=0.0031 Score=42.62 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-++|.|||+|..|...|..|++.|++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~ 43 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVL 43 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999876
No 275
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.54 E-value=0.0015 Score=45.94 Aligned_cols=30 Identities=30% Similarity=0.341 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
..++|+|||+|.+|+..|..|++. |.+|++
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~ 257 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADM 257 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEE
Confidence 467999999999999999999999 888775
No 276
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.53 E-value=0.0019 Score=47.38 Aligned_cols=31 Identities=29% Similarity=0.583 Sum_probs=28.3
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|.+|+..|..|++.+.+|++
T Consensus 189 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv 219 (549)
T 4ap3_A 189 FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFV 219 (549)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHhhCCEEEE
Confidence 3568999999999999999999999999876
No 277
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.53 E-value=0.0026 Score=42.80 Aligned_cols=28 Identities=21% Similarity=0.189 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|.|||+|..|...|..|+++|++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l 32 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTA 32 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 6899999999999999999999999876
No 278
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.52 E-value=0.0026 Score=45.17 Aligned_cols=29 Identities=17% Similarity=0.309 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 202 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTV 202 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEE
Confidence 57999999999999999999999999886
No 279
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.50 E-value=0.0019 Score=43.26 Aligned_cols=30 Identities=37% Similarity=0.430 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|.+|+..|..|++.|.+|++
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~ 180 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITL 180 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 467999999999999999999999998876
No 280
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.50 E-value=0.0028 Score=46.07 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=29.3
Q ss_pred CCccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 47 PTLRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 47 ~~~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
|......+|.|||.|..|+.+|..|+++|++|+.
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g 49 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVG 49 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEE
Confidence 3444567999999999999999999999999874
No 281
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.49 E-value=0.0024 Score=45.15 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 177 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNL 177 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEE
Confidence 357899999999999999999999999876
No 282
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.46 E-value=0.0023 Score=42.71 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=27.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+..|..|++.|.+|++
T Consensus 154 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~ 183 (319)
T 3cty_A 154 KGKRVVTIGGGNSGAIAAISMSEYVKNVTI 183 (319)
T ss_dssp BTSEEEEECCSHHHHHHHHHHTTTBSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCcEEE
Confidence 357899999999999999999999988875
No 283
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.46 E-value=0.0034 Score=44.65 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 200 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHI 200 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999999999999999876
No 284
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.43 E-value=0.003 Score=43.17 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=26.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|||+|..|...|..|++.|++|++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l 47 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVIL 47 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 457899999999999999999999999876
No 285
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.43 E-value=0.0034 Score=43.84 Aligned_cols=29 Identities=31% Similarity=0.381 Sum_probs=27.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtv 180 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTL 180 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEE
Confidence 67999999999999999999999999876
No 286
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.42 E-value=0.0033 Score=43.83 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+.+|..|++.|.+|++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtv 170 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDV 170 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 57899999999999999999999999876
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.39 E-value=0.0043 Score=44.55 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=27.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCC-eee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGT-ELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~-v~v 80 (81)
..+++|+|||+|.+|+.+|..+.+.|.+ |++
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vti 293 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKC 293 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEE
Confidence 4578999999999999999999999985 765
No 288
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.38 E-value=0.0041 Score=44.16 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 208 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTV 208 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 357999999999999999999999999876
No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.34 E-value=0.0042 Score=43.00 Aligned_cols=29 Identities=28% Similarity=0.200 Sum_probs=26.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|.|||+|.-|...|..|+++||+|++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l 34 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKL 34 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEE
Confidence 36899999999999999999999999986
No 290
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.34 E-value=0.0036 Score=41.73 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=25.9
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|.+|+..|..|++.| +|++
T Consensus 161 ~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~ 190 (357)
T 4a9w_A 161 FAGMRVAIIGGGNSGAQILAEVSTVA-ETTW 190 (357)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTTS-EEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhhC-CEEE
Confidence 34689999999999999999999998 4654
No 291
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.33 E-value=0.0045 Score=44.17 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 215 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTV 215 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 347899999999999999999999999886
No 292
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.30 E-value=0.0033 Score=45.62 Aligned_cols=30 Identities=37% Similarity=0.546 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|.+|+.+|..|++.|.+|++
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtl 383 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTL 383 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 468999999999999999999999998876
No 293
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.29 E-value=0.004 Score=42.50 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|..|...|..|++.|++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~ 30 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSV 30 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 4799999999999999999999999876
No 294
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.28 E-value=0.0048 Score=40.64 Aligned_cols=31 Identities=29% Similarity=0.367 Sum_probs=27.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
....+|.|||.|..|...|..|+++|++|++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~ 47 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTI 47 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999875
No 295
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.26 E-value=0.0029 Score=41.36 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+..|..|++.| +|++
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~ 168 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTF 168 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEE
Confidence 4679999999999999999999998 8765
No 296
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.25 E-value=0.0049 Score=43.63 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|..|+..|..|++.|.+|++
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 175 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHV 175 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 457999999999999999999999999886
No 297
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.25 E-value=0.004 Score=45.28 Aligned_cols=29 Identities=24% Similarity=0.334 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-+|.|||.|..|+..|..|+++|++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~ 36 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFC 36 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEE
Confidence 35899999999999999999999999875
No 298
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.24 E-value=0.005 Score=42.24 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=26.3
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|..|...|..|++.|++|++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~ 31 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINV 31 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999999999876
No 299
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.23 E-value=0.0033 Score=42.71 Aligned_cols=30 Identities=40% Similarity=0.517 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|||+|++|+..|..|++.|.+|++
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~l 191 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTL 191 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence 467999999999999999999999998876
No 300
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.22 E-value=0.005 Score=40.57 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~ 182 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYL 182 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEE
Confidence 457999999999999999999999998876
No 301
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.21 E-value=0.0048 Score=40.69 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=25.3
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||+|..|...|..|++.|++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~ 28 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQG 28 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEE
Confidence 699999999999999999999999875
No 302
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.20 E-value=0.0051 Score=44.89 Aligned_cols=30 Identities=13% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtl 215 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTL 215 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 357999999999999999999999999876
No 303
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.19 E-value=0.0044 Score=39.86 Aligned_cols=27 Identities=22% Similarity=0.223 Sum_probs=25.6
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|+|+|..|...|..|.++|++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~v 28 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVI 28 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEE
Confidence 699999999999999999999999876
No 304
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.18 E-value=0.006 Score=44.12 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=26.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
..+|+|+|||+|.+|...+..|++. +.+|++
T Consensus 244 ~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~ 276 (501)
T 4b63_A 244 SKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTL 276 (501)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEE
T ss_pred cCCcEEEEECCcHHHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999999986 555553
No 305
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.17 E-value=0.0044 Score=42.13 Aligned_cols=28 Identities=29% Similarity=0.394 Sum_probs=25.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|..|.+.|..|++.|++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~ 30 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHF 30 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 4799999999999999999999999876
No 306
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.16 E-value=0.005 Score=44.37 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc---CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE---AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~---g~~v~v 80 (81)
.++++|||+|+.|+..|..|++. |.+|++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 47999999999999999999999 999886
No 307
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.16 E-value=0.0053 Score=40.89 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=25.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||+|..|...|..|++.|++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~ 31 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTL 31 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEE
Confidence 4799999999999999999999999875
No 308
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.14 E-value=0.0049 Score=40.52 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~ 175 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYL 175 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEE
Confidence 457999999999999999999999998875
No 309
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.13 E-value=0.0069 Score=41.17 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=27.8
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
....+|.|||.|..|...|..|++.|++|++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~ 49 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTV 49 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEE
Confidence 3446899999999999999999999999875
No 310
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.11 E-value=0.018 Score=43.87 Aligned_cols=29 Identities=38% Similarity=0.412 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+|.|||+|..|...|..|+++|++|++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l 340 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVIL 340 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEE
Confidence 46899999999999999999999999986
No 311
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.08 E-value=0.008 Score=41.66 Aligned_cols=29 Identities=28% Similarity=0.230 Sum_probs=25.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|+|||+|..|...|..|+++|+ +|.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L 38 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVL 38 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 4689999999999999999999998 7554
No 312
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.07 E-value=0.0058 Score=43.89 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc---CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE---AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~---g~~v~v 80 (81)
.++++|||+|+.|+..|..|++. |.+|++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 218 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDL 218 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEE
Confidence 47999999999999999999999 999886
No 313
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.07 E-value=0.0064 Score=44.33 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-++|.|||+|..|...|..|++.|++|++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 346899999999999999999999999986
No 314
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.04 E-value=0.0059 Score=44.20 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-++.|||.|..|+..|..|+++||+|++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~ 36 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVC 36 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEE
Confidence 35899999999999999999999999975
No 315
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.04 E-value=0.0066 Score=41.72 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=26.3
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|+|||..|..+|+.+.+.|++|++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~ 29 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVL 29 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999999999875
No 316
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.02 E-value=0.006 Score=43.99 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|+..|..|+++|++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~ 30 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRC 30 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEE
Confidence 4799999999999999999999999875
No 317
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.02 E-value=0.0089 Score=42.85 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=27.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++.|.+|++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtl 210 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTV 210 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 57999999999999999999999999876
No 318
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.00 E-value=0.007 Score=43.81 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=26.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++++|||+|..|+..|..|++.|.+|++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtl 242 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVM 242 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 8999999999999999999999999876
No 319
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.98 E-value=0.007 Score=40.81 Aligned_cols=28 Identities=29% Similarity=0.404 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|.-|...|..|++.|++|++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~ 30 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTL 30 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 4799999999999999999999999875
No 320
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.96 E-value=0.0083 Score=40.58 Aligned_cols=28 Identities=21% Similarity=0.356 Sum_probs=25.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
.+|+|||+|..|...|..|++.|+ +|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l 37 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVL 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEE
Confidence 589999999999999999999998 7764
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.94 E-value=0.0085 Score=38.64 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=26.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|.|||+|..|...|..|++.|++|++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~ 47 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTY 47 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 346899999999999999999999998875
No 322
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.94 E-value=0.0082 Score=42.62 Aligned_cols=29 Identities=31% Similarity=0.291 Sum_probs=27.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhHc-CCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKE-AGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~-g~~v~v 80 (81)
.++++|||+|++|+..|..|++. |.+|++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtl 188 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTV 188 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEE
Confidence 57999999999999999999999 999876
No 323
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.93 E-value=0.0078 Score=41.33 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=26.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+.++|.|||+|..|...|..|+ .|++|++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v 39 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVL 39 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEE
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEE
Confidence 4589999999999999999999 9999986
No 324
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.92 E-value=0.0086 Score=40.96 Aligned_cols=29 Identities=17% Similarity=0.317 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||+|..|...|..|++.|++|++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~ 42 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVIL 42 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 36899999999999999999999999876
No 325
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.92 E-value=0.0027 Score=38.41 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=26.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|..|...|..|.+.|++|++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v 49 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTV 49 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 57899999999999999999999988654
No 326
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.91 E-value=0.0074 Score=43.54 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=28.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++|+|||+|.+|...+..|.+.|.+|+|
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~v 40 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTV 40 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEE
Confidence 3468999999999999999999999999887
No 327
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.90 E-value=0.0096 Score=39.89 Aligned_cols=30 Identities=20% Similarity=0.312 Sum_probs=27.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|+|+|-+|..+|..|++.|.+|++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEE
Confidence 357899999999999999999999988775
No 328
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.88 E-value=0.0089 Score=43.13 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=27.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-.+|.|||+|..|...|..|+++|++|++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l 65 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVA 65 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 346899999999999999999999999876
No 329
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.87 E-value=0.0068 Score=40.14 Aligned_cols=30 Identities=37% Similarity=0.450 Sum_probs=27.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|++|+..|..|++.|.+|++
T Consensus 153 ~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~ 182 (332)
T 3lzw_A 153 AGRRVAILGGGDSAVDWALMLEPIAKEVSI 182 (332)
T ss_dssp BTCEEEEECSSHHHHHHHHHHTTTBSEEEE
T ss_pred CCCEEEEECCCHhHHHHHHHHHhhCCeEEE
Confidence 468999999999999999999999988875
No 330
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.87 E-value=0.0078 Score=40.66 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=25.3
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||+|..|...|..|++.|++|++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~ 28 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRI 28 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEE
Confidence 689999999999999999999999875
No 331
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.85 E-value=0.0099 Score=41.47 Aligned_cols=29 Identities=31% Similarity=0.274 Sum_probs=26.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|+|+|.+|+.++..|...|.+|++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v 195 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQI 195 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 47999999999999999999999997765
No 332
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.85 E-value=0.012 Score=38.65 Aligned_cols=28 Identities=29% Similarity=0.359 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|.|+|..|...+..|.++|++|++
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~ 31 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTG 31 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999999999875
No 333
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.84 E-value=0.0097 Score=42.82 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=27.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|+|+|.+|+.+|..|...|.+|++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v 218 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSA 218 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 457999999999999999999999998875
No 334
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.83 E-value=0.0053 Score=44.54 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=26.7
Q ss_pred cCCCcEEEECCCHHHHH-HHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLG-AAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~-~A~~L~~~g~~v~v 80 (81)
...++|+|||.|-+|++ +|..|.++|++|++
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~ 51 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISG 51 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEE
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEE
Confidence 44689999999999997 69999999999975
No 335
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.83 E-value=0.01 Score=42.04 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~ 198 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTL 198 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 357999999999999999999999999876
No 336
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.83 E-value=0.0098 Score=45.07 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=27.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|+|+|..|...|..|++.|.+|++
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~ 36 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLH 36 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEE
Confidence 58999999999999999999999999986
No 337
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.81 E-value=0.01 Score=41.68 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=27.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+.+|+|+|+|.+|+.++..+...|.+|++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~ 200 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMA 200 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999988664
No 338
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.80 E-value=0.011 Score=39.89 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=25.6
Q ss_pred ccCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
..+.++|+|.|| |..|...+..|+++|++|++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~ 48 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRG 48 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEE
Confidence 345679999998 99999999999999999875
No 339
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.79 E-value=0.01 Score=42.15 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=26.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+.+|+|+|+|.+|+.+|..+...|.+|++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v 200 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRA 200 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999987764
No 340
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.79 E-value=0.0094 Score=40.54 Aligned_cols=28 Identities=29% Similarity=0.335 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||+|..|...|..|++.|++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~ 32 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLA 32 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999999999999875
No 341
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.76 E-value=0.0073 Score=43.04 Aligned_cols=27 Identities=22% Similarity=0.242 Sum_probs=25.3
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||.|..|+..|..|+++|++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~ 28 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIG 28 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 689999999999999999999999875
No 342
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.75 E-value=0.013 Score=37.83 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=26.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|.|||+|..|...|..|++.|++|++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~ 56 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVV 56 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEE
Confidence 346899999999999999999999998865
No 343
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.75 E-value=0.01 Score=42.41 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=27.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|+|+|..|+.+|..|...|.+|++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v 212 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTG 212 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 457999999999999999999999998875
No 344
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.71 E-value=0.013 Score=41.84 Aligned_cols=30 Identities=23% Similarity=0.276 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|||+|+.|+..|..|++.|.+|++
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtl 219 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTL 219 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEE
Confidence 357999999999999999999999998876
No 345
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.70 E-value=0.01 Score=41.54 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||+|.-|.+.|..|+++|++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l 57 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRL 57 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEE
Confidence 35899999999999999999999999876
No 346
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.69 E-value=0.012 Score=40.12 Aligned_cols=28 Identities=29% Similarity=0.444 Sum_probs=25.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+|.|||+|..|...|..|+++|+ +|++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l 33 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVL 33 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 589999999999999999999998 7654
No 347
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.65 E-value=0.013 Score=39.09 Aligned_cols=28 Identities=29% Similarity=0.362 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|+++|++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~ 29 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTI 29 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEE
Confidence 4799999999999999999999999875
No 348
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.62 E-value=0.014 Score=40.81 Aligned_cols=30 Identities=27% Similarity=0.273 Sum_probs=27.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|+|+|+|..|..+|..|+..|.+|++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~ 194 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTI 194 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 457999999999999999999999998765
No 349
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.61 E-value=0.012 Score=42.38 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=24.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhH----cCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNK----EAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~----~g~~v~v 80 (81)
.++++|||+|+.|+..|..|++ .|.+|++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~ 212 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQ 212 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEE
Confidence 5799999999999999999987 4666664
No 350
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.61 E-value=0.013 Score=42.64 Aligned_cols=28 Identities=32% Similarity=0.515 Sum_probs=26.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|.|||+|..|...|..|+++|++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l 33 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLL 33 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 5899999999999999999999999986
No 351
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.59 E-value=0.0053 Score=45.78 Aligned_cols=29 Identities=34% Similarity=0.541 Sum_probs=25.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTEL 79 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~ 79 (81)
..++|+|||+|..|+..|.+|++.|.+|+
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 45799999999999999999999997654
No 352
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.59 E-value=0.014 Score=39.68 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=26.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|+|+|-+|.+++..|++.|.+++|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V 146 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSV 146 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 68999999999999999999999977765
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.58 E-value=0.015 Score=37.22 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=26.9
Q ss_pred cCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++|+|.|+ |..|...+..|+++|++|++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~ 50 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVA 50 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEE
Confidence 34679999998 99999999999999999875
No 354
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.58 E-value=0.013 Score=39.99 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=26.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|.+|..+|..|++.|. +|+|
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v 170 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDM 170 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEE
Confidence 35789999999999999999999998 6765
No 355
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.57 E-value=0.015 Score=40.23 Aligned_cols=28 Identities=29% Similarity=0.412 Sum_probs=25.3
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+|+|||+|..|...|..|+++|+ +|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L 43 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYM 43 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 589999999999999999999999 7554
No 356
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.55 E-value=0.0098 Score=39.92 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=27.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|+|+|-+|...|..|++.|.+|+|
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 357899999999999999999999988776
No 357
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.53 E-value=0.015 Score=39.21 Aligned_cols=29 Identities=31% Similarity=0.357 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|...|..|++.|++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~ 35 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWG 35 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 36899999999999999999999999876
No 358
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.50 E-value=0.015 Score=38.13 Aligned_cols=28 Identities=11% Similarity=0.018 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|.|+|..|...+..|.++|++|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~ 33 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIG 33 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999999999875
No 359
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.50 E-value=0.01 Score=43.39 Aligned_cols=28 Identities=29% Similarity=0.320 Sum_probs=26.3
Q ss_pred CcEEEECCCHHHHHHHHHHhHc-CC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE-AG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~-g~-~v~v 80 (81)
.+|.|||.|..|+..|..|+++ |+ +|++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~ 48 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLG 48 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEE
Confidence 5899999999999999999999 99 8875
No 360
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.49 E-value=0.016 Score=40.70 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=27.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++|+|+|+|..|..+|..+...|.+|++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~ 196 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTV 196 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 467999999999999999999999998764
No 361
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.49 E-value=0.013 Score=41.95 Aligned_cols=22 Identities=27% Similarity=0.371 Sum_probs=20.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHh
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLN 72 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~ 72 (81)
..++++|||+|..|+.+|..|+
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~ 165 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILL 165 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHh
Confidence 4689999999999999999999
No 362
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.49 E-value=0.011 Score=44.76 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=27.4
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVG--SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG--~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+||| +|..|+..|..|++.|.+|++
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtl 558 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTI 558 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEE
Confidence 357999998 999999999999999999886
No 363
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.45 E-value=0.022 Score=38.34 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=28.8
Q ss_pred CCccCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 47 PTLRTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 47 ~~~~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
+.....++|+|.|+ |..|...+..|+++|++|++
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~ 49 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILV 49 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 33445678999998 99999999999999999875
No 364
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.45 E-value=0.015 Score=39.69 Aligned_cols=27 Identities=33% Similarity=0.422 Sum_probs=24.6
Q ss_pred cEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
+|+|||+|..|...|..|+++|+ +|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L 30 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVL 30 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEE
Confidence 79999999999999999999998 6654
No 365
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.42 E-value=0.015 Score=39.65 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=27.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...+|.|||.|..|...|..|++.|++|++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~ 59 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQV 59 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEE
Confidence 346899999999999999999999999875
No 366
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.41 E-value=0.017 Score=45.29 Aligned_cols=29 Identities=14% Similarity=0.285 Sum_probs=26.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.++|+|||+|..|+.+|..|++.|. +|++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtv 361 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFL 361 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEE
Confidence 4699999999999999999999996 6775
No 367
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.38 E-value=0.014 Score=38.94 Aligned_cols=28 Identities=18% Similarity=0.138 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|+++|++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~ 29 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTV 29 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEE
Confidence 4799999999999999999999999876
No 368
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.35 E-value=0.018 Score=44.20 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=28.8
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeeeC
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELIK 81 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v~ 81 (81)
..-++|.|||+|..|...|..+++.|++|+++
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~ 345 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAV 345 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcc
Confidence 34579999999999999999999999999874
No 369
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.35 E-value=0.015 Score=39.59 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|-+|.++|..|++.|. +|+|
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 45789999999999999999999998 6765
No 370
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.29 E-value=0.011 Score=41.29 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=24.8
Q ss_pred cEEEECCCHHHHHHHHHHhH-cCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNK-EAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~-~g~~v~v 80 (81)
+|.|||+|..|...|..|++ .|++|++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~ 31 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRV 31 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 79999999999999999998 5999875
No 371
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.28 E-value=0.018 Score=38.23 Aligned_cols=30 Identities=27% Similarity=0.321 Sum_probs=25.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
...+|+|||+|-.|..+|..|++.|. ++++
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~l 60 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTL 60 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEE
Confidence 34789999999999999999999997 4443
No 372
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.27 E-value=0.015 Score=42.17 Aligned_cols=31 Identities=29% Similarity=0.648 Sum_probs=28.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|||+|.+|+..|..|++.|.+|++
T Consensus 184 ~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv 214 (542)
T 1w4x_A 184 FSGQRVGVIGTGSSGIQVSPQIAKQAAELFV 214 (542)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHHBSEEEE
T ss_pred cCCCEEEEECCCccHHHHHHHHhhcCceEEE
Confidence 3578999999999999999999999988875
No 373
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.26 E-value=0.019 Score=38.02 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=25.2
Q ss_pred cEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
||+|.|| |..|...+..|.++||+|++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~ 29 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTL 29 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 5999998 99999999999999999875
No 374
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.25 E-value=0.022 Score=39.62 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=27.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++|+|+|+|..|...+..+.+.|++|++
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~ 42 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAV 42 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 467999999999999999999999999875
No 375
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.25 E-value=0.022 Score=39.48 Aligned_cols=30 Identities=27% Similarity=0.309 Sum_probs=26.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+++++|+|+|-+|.++|..|++.|. +|+|
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i 183 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISI 183 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEE
Confidence 46899999999999999999999998 5665
No 376
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.24 E-value=0.018 Score=36.52 Aligned_cols=27 Identities=30% Similarity=0.481 Sum_probs=24.9
Q ss_pred cEEEEC-CCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVG-SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG-~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|+| +|..|...|..|+++|++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~ 29 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVV 29 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEE
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEE
Confidence 689999 999999999999999998865
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.24 E-value=0.016 Score=38.84 Aligned_cols=28 Identities=29% Similarity=0.305 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|++.|++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~ 31 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNV 31 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEE
Confidence 5899999999999999999999999875
No 378
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.22 E-value=0.012 Score=45.89 Aligned_cols=29 Identities=17% Similarity=0.359 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|+.|+.+|..|++.|.+|+|
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtv 312 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAV 312 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEE
Confidence 47899999999999999999999999876
No 379
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.21 E-value=0.024 Score=38.29 Aligned_cols=30 Identities=23% Similarity=0.442 Sum_probs=27.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++.|||.|..|...|..|...|.+|++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~ 183 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKV 183 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEE
Confidence 468999999999999999999999998765
No 380
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.20 E-value=0.021 Score=37.48 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=25.2
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||.|..|...|..|++.|++|++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~ 28 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVT 28 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEE
Confidence 689999999999999999999999875
No 381
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.18 E-value=0.024 Score=39.21 Aligned_cols=29 Identities=28% Similarity=0.442 Sum_probs=25.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|.|||+|..|...|+.|+++|+ ++++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l 37 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVL 37 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 4689999999999999999999999 6654
No 382
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.17 E-value=0.023 Score=40.15 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=27.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++|+|+|+|..|..+|..|.+.|.+|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv 201 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVV 201 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 468999999999999999999999999875
No 383
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.17 E-value=0.025 Score=40.39 Aligned_cols=29 Identities=24% Similarity=0.271 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|+|+|.|..|...|..|.+.|++|++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvv 32 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVV 32 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 45799999999999999999999999886
No 384
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.17 E-value=0.016 Score=39.14 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=26.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|...|..|+++|++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~ 43 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTV 43 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEE
Confidence 35899999999999999999999999876
No 385
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.17 E-value=0.025 Score=38.26 Aligned_cols=31 Identities=23% Similarity=0.404 Sum_probs=27.8
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.++++.|||.|..|...|..|...|.+|++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~ 185 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKV 185 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEE
Confidence 3468999999999999999999999998765
No 386
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.17 E-value=0.015 Score=38.85 Aligned_cols=28 Identities=21% Similarity=0.064 Sum_probs=25.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHc-----C-CCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE-----A-GTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~-----g-~~v~v 80 (81)
.+|.|||+|..|...|..|++. | ++|++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~ 42 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSW 42 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 4799999999999999999999 9 88875
No 387
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.16 E-value=0.025 Score=37.90 Aligned_cols=30 Identities=30% Similarity=0.586 Sum_probs=26.9
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVG-SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG-~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|+| +|.+|...|..|++.|.+|++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i 148 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVL 148 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEE
Confidence 457899999 899999999999999998765
No 388
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.16 E-value=0.011 Score=40.86 Aligned_cols=27 Identities=30% Similarity=0.397 Sum_probs=25.5
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||+|..|...|..|++.|++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~ 43 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCV 43 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 799999999999999999999999875
No 389
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.14 E-value=0.015 Score=37.63 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=26.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||+|..|...|..|++.|++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~ 51 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAII 51 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEE
Confidence 35899999999999999999999999876
No 390
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.14 E-value=0.02 Score=38.97 Aligned_cols=27 Identities=30% Similarity=0.352 Sum_probs=24.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|+|||+|..|...|..|+ .|++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~ 29 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTV 29 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEE
Confidence 47999999999999999999 9998875
No 391
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.14 E-value=0.016 Score=41.03 Aligned_cols=26 Identities=35% Similarity=0.432 Sum_probs=24.1
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||.|..|+..|..|++ |++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~ 27 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTI 27 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEE
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEE
Confidence 68999999999999999999 999875
No 392
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.10 E-value=0.026 Score=38.94 Aligned_cols=28 Identities=25% Similarity=0.280 Sum_probs=24.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+|.|||+|..|...|..|+++|+ +|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L 33 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVL 33 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 589999999999999999999998 6443
No 393
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.09 E-value=0.033 Score=37.76 Aligned_cols=29 Identities=28% Similarity=0.292 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|...|..|++.|++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~ 37 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAI 37 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 46899999999999999999999999876
No 394
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.08 E-value=0.02 Score=38.36 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=26.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++++|||+|-+|.+.|..|.+.|++|++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v 157 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFL 157 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEE
Confidence 47899999999999999999999987665
No 395
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.08 E-value=0.038 Score=36.78 Aligned_cols=31 Identities=19% Similarity=0.102 Sum_probs=27.5
Q ss_pred cCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|.|+ |..|...+..|+++|++|++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~ 40 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRG 40 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEE
Confidence 34578999998 99999999999999999874
No 396
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.08 E-value=0.031 Score=36.90 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=26.8
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|.|+ |..|...+..|+++|++|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 36 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTV 36 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 578999999 99999999999999999875
No 397
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.07 E-value=0.028 Score=38.06 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=26.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|-+|.++|..|++.|. +|+|
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i 149 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVI 149 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEE
Confidence 46899999999999999999999996 6654
No 398
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.06 E-value=0.039 Score=37.17 Aligned_cols=29 Identities=31% Similarity=0.402 Sum_probs=26.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||+|..|...|..|++.|++|++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~ 58 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTV 58 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEE
Confidence 36899999999999999999999999875
No 399
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.05 E-value=0.029 Score=38.21 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=26.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCC-eee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGT-ELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~-v~v 80 (81)
..++++|+|+|-+|.+++..|++.|.+ ++|
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 467999999999999999999999984 665
No 400
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.03 E-value=0.007 Score=42.05 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=25.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcC-------CCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEA-------GTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g-------~~v~v 80 (81)
.+|.|||+|..|...|..|++.| ++|++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~ 56 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRM 56 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEE
Confidence 57999999999999999999999 88875
No 401
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.01 E-value=0.019 Score=41.51 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=24.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|+..|..|++ |++|++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~ 63 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVA 63 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEE
Confidence 489999999999999999998 999875
No 402
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.00 E-value=0.025 Score=43.03 Aligned_cols=30 Identities=30% Similarity=0.359 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-.+|.|||+|..|...|..|++.|++|++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l 342 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILM 342 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEE
Confidence 346899999999999999999999999986
No 403
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.99 E-value=0.029 Score=38.85 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|-+|.+++..|++.|. +++|
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEE
Confidence 46799999999999999999999998 5654
No 404
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.97 E-value=0.028 Score=35.41 Aligned_cols=27 Identities=22% Similarity=0.443 Sum_probs=24.9
Q ss_pred cEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|.|+ |..|...+..|+++|++|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~ 29 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLA 29 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEE
Confidence 5899998 99999999999999999875
No 405
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.95 E-value=0.026 Score=41.01 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=26.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|.|||.|..|...|..|+++|++|++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v 43 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSI 43 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEE
Confidence 46899999999999999999999999876
No 406
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=94.93 E-value=0.025 Score=38.63 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|-+|.+++..|++.|. +|+|
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEE
Confidence 46799999999999999999999998 5655
No 407
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.91 E-value=0.021 Score=41.22 Aligned_cols=30 Identities=30% Similarity=0.360 Sum_probs=26.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++.+..|||.|..|+..|..|+++||+|++
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~ 39 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLG 39 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEE
Confidence 456899999999999999999999999975
No 408
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.91 E-value=0.03 Score=35.04 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=24.7
Q ss_pred cEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|.|+ |..|...+..|+++|++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~ 29 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTA 29 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEE
Confidence 6999996 99999999999999999875
No 409
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.90 E-value=0.026 Score=38.42 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=26.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|.|||.|..|...|..|++.|+ +|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~ 53 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAA 53 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEE
Confidence 4689999999999999999999999 7765
No 410
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.90 E-value=0.028 Score=39.73 Aligned_cols=30 Identities=30% Similarity=0.408 Sum_probs=26.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+++|+|+|+|..|..+|..|...|. +|++
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v 196 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLV 196 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEE
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEE
Confidence 46799999999999999999999998 6654
No 411
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.89 E-value=0.029 Score=37.06 Aligned_cols=27 Identities=26% Similarity=0.334 Sum_probs=24.9
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||+|..|...|..|.+.|++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~ 28 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIG 28 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEE
Confidence 689999999999999999999998765
No 412
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.89 E-value=0.029 Score=37.90 Aligned_cols=29 Identities=31% Similarity=0.177 Sum_probs=26.5
Q ss_pred CCcEEEEC-CCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVG-SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG-~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.||| .|..|.+.|..|++.|++|++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~ 50 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISI 50 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEE
Confidence 35899999 999999999999999999875
No 413
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.88 E-value=0.033 Score=34.40 Aligned_cols=28 Identities=32% Similarity=0.439 Sum_probs=25.7
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|.|+ |..|...+..|+++|++|++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~ 32 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTV 32 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEE
Confidence 57999998 99999999999999998865
No 414
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.86 E-value=0.032 Score=38.41 Aligned_cols=25 Identities=36% Similarity=0.464 Sum_probs=23.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG 76 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~ 76 (81)
..||+|||+|..|...|..|+.+|+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~ 31 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT 31 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC
Confidence 3689999999999999999999987
No 415
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=94.86 E-value=0.036 Score=38.20 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=27.4
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
...++|+|+|+|..|...+..+.+.|++|++
T Consensus 9 ~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~ 39 (391)
T 1kjq_A 9 PAATRVMLLGSGELGKEVAIECQRLGVEVIA 39 (391)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 4557999999999999999999999998764
No 416
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.85 E-value=0.026 Score=38.68 Aligned_cols=27 Identities=30% Similarity=0.367 Sum_probs=24.7
Q ss_pred cEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
+|.|||+|..|...|..|++.|+ +|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l 30 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVL 30 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEE
Confidence 69999999999999999999998 7664
No 417
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=94.83 E-value=0.033 Score=36.24 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=27.8
Q ss_pred CccCCCcEEEECCC---HHHHHHHHHHhHcCCCeee
Q psy11001 48 TLRTGKKVAIVGSG---PSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 48 ~~~~~~~v~viG~G---~aG~~~A~~L~~~g~~v~v 80 (81)
...+.++++|.|+. --|...|..|+++|++|++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~ 45 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAF 45 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEE
Confidence 34567899999963 6899999999999999875
No 418
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.82 E-value=0.031 Score=38.05 Aligned_cols=30 Identities=17% Similarity=0.381 Sum_probs=26.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..++++|+|+|-+|...+..|++.|. +|+|
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 155 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITV 155 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEE
Confidence 46799999999999999999999997 6665
No 419
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.82 E-value=0.031 Score=38.42 Aligned_cols=29 Identities=17% Similarity=0.379 Sum_probs=25.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
..+|.|||+|..|...|+.|+.+|+ ++.+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L 44 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVL 44 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999999999999999999998 5544
No 420
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.81 E-value=0.029 Score=36.67 Aligned_cols=27 Identities=26% Similarity=0.252 Sum_probs=24.9
Q ss_pred cEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
+|.|||+|..|...|..|++.| ++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~ 29 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYI 29 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEE
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEE
Confidence 6899999999999999999999 88865
No 421
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.80 E-value=0.028 Score=40.62 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=26.8
Q ss_pred CCCcEEEECCCHHHHH-HHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLG-AAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~-~A~~L~~~g~~v~v 80 (81)
..++|+|||-|-+|++ +|..|.++|++|.+
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~ 48 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISG 48 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEE
Confidence 4568999999999998 89999999999875
No 422
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.77 E-value=0.027 Score=38.49 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=26.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcC-CCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEA-GTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g-~~v~v 80 (81)
..+|.|||.|..|...|..|+++| ++|++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~ 53 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAA 53 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEE
Confidence 368999999999999999999999 98875
No 423
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.76 E-value=0.033 Score=38.11 Aligned_cols=27 Identities=33% Similarity=0.447 Sum_probs=24.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC-Cee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG-TEL 79 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~-~v~ 79 (81)
.+|.|||+|..|...|..|+.+|+ ++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~ 30 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIV 30 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEE
Confidence 479999999999999999999997 644
No 424
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.75 E-value=0.034 Score=38.95 Aligned_cols=29 Identities=17% Similarity=0.382 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|...|..|+++|++|++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v 50 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVV 50 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEE
Confidence 46899999999999999999999999876
No 425
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.75 E-value=0.036 Score=36.90 Aligned_cols=29 Identities=28% Similarity=0.256 Sum_probs=26.2
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
+++|+|.|+ |..|...+..|+++|++|++
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~ 32 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYG 32 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 468999998 99999999999999999875
No 426
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.73 E-value=0.034 Score=36.78 Aligned_cols=28 Identities=29% Similarity=0.214 Sum_probs=24.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
.+|.|||+|..|...|..|++.|+ +|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~ 31 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG 31 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE
Confidence 479999999999999999999998 6654
No 427
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=94.72 E-value=0.027 Score=37.94 Aligned_cols=29 Identities=28% Similarity=0.471 Sum_probs=26.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++++|+|+|-.|.+.|..|++.| +|++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v 155 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIII 155 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEE
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEE
Confidence 3578999999999999999999999 8775
No 428
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.72 E-value=0.038 Score=38.38 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=25.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|.|||+|..|.+.|..|+..|+ ++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L 36 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVL 36 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 4689999999999999999999998 6544
No 429
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.71 E-value=0.039 Score=38.37 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=23.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG 76 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~ 76 (81)
..+|.|||+|..|.+.|..|++.|+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~ 29 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGI 29 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC
Confidence 4689999999999999999999997
No 430
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=94.69 E-value=0.025 Score=40.62 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=26.8
Q ss_pred CCCcEEEECCCHHHHH-HHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLG-AAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~-~A~~L~~~g~~v~v 80 (81)
..++|+|||-|-+|++ +|..|.++|++|.+
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~ 47 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGYQISG 47 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEE
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCCEEEE
Confidence 4568999999999998 89999999999875
No 431
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.68 E-value=0.057 Score=37.76 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=25.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
...+|.|||+|..|...|+.|+.+|+ ++.+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L 51 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVAL 51 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEE
Confidence 45799999999999999999999997 4543
No 432
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.67 E-value=0.048 Score=38.04 Aligned_cols=27 Identities=22% Similarity=0.353 Sum_probs=24.6
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCC
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAG 76 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~ 76 (81)
....+|.|||+|..|.+.|+.|+.+|+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~ 43 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDL 43 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 445799999999999999999999997
No 433
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=94.62 E-value=0.039 Score=37.31 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=25.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.++++|+|+|-+|.+++..|++.|. +++|
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v 148 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKI 148 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 4689999999999999999999997 5665
No 434
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.61 E-value=0.042 Score=40.14 Aligned_cols=29 Identities=10% Similarity=0.048 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|...|..|+++|++|++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v 38 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCA 38 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEE
Confidence 46899999999999999999999999876
No 435
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.60 E-value=0.029 Score=36.63 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=26.6
Q ss_pred CCCcEEEECC-CH-HHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGS-GP-SGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~-G~-aG~~~A~~L~~~g~~v~v 80 (81)
+++.++|.|+ |. -|...|..|+++|++|++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~ 52 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVI 52 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEE
Confidence 4678999998 75 999999999999999875
No 436
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.58 E-value=0.033 Score=37.81 Aligned_cols=28 Identities=29% Similarity=0.506 Sum_probs=24.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcC--CCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEA--GTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g--~~v~v 80 (81)
.+|.|||+|..|...|..|+++| ++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l 31 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVF 31 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEE
Confidence 37999999999999999999999 56654
No 437
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.57 E-value=0.037 Score=37.80 Aligned_cols=27 Identities=26% Similarity=0.537 Sum_probs=23.8
Q ss_pred cEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
+|+|||+|..|...|..|+++ |++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l 30 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVL 30 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEE
Confidence 699999999999999999996 677764
No 438
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.56 E-value=0.043 Score=38.19 Aligned_cols=30 Identities=23% Similarity=0.340 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|+|+|..|...+..+.+.|++|++
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv 40 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVV 40 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 457899999999999999999999999875
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.55 E-value=0.016 Score=41.91 Aligned_cols=28 Identities=32% Similarity=0.368 Sum_probs=26.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
=+|+|+|+|..|...|..|...|++|+|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~v 31 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITI 31 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEE
Confidence 3799999999999999999999999987
No 440
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.55 E-value=0.04 Score=40.53 Aligned_cols=30 Identities=27% Similarity=0.510 Sum_probs=27.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|+|+|..|..+|..|+..|.+|++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv 293 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIV 293 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 468999999999999999999999998875
No 441
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.55 E-value=0.03 Score=37.25 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=25.7
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||+|..|...|..|++.|++|.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~ 33 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVV 33 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEE
Confidence 3799999999999999999999998865
No 442
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.54 E-value=0.035 Score=36.88 Aligned_cols=27 Identities=30% Similarity=0.337 Sum_probs=25.1
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||.|..|...|..|++.|++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~ 28 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLII 28 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEE
Confidence 689999999999999999999999875
No 443
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=94.53 E-value=0.04 Score=38.00 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=25.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|+|+|..|...+..|.+.|+++++
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~ 29 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIV 29 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999999998764
No 444
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.53 E-value=0.028 Score=37.27 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=25.9
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|++.|++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~ 31 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHV 31 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEE
Confidence 4799999999999999999999999875
No 445
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.53 E-value=0.025 Score=40.95 Aligned_cols=28 Identities=25% Similarity=0.247 Sum_probs=25.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.+|.|||.|..|+..|..|+++ |++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~ 39 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTV 39 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEE
Confidence 4899999999999999999999 688865
No 446
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.50 E-value=0.05 Score=37.54 Aligned_cols=29 Identities=38% Similarity=0.536 Sum_probs=26.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|.+.|..|++.|++|++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~ 44 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTV 44 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEE
Confidence 46899999999999999999999998865
No 447
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.50 E-value=0.044 Score=38.15 Aligned_cols=26 Identities=27% Similarity=0.309 Sum_probs=23.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG 76 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~ 76 (81)
...+|+|||+|..|.+.|+.|+..|+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~ 33 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI 33 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 45699999999999999999999988
No 448
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.48 E-value=0.04 Score=36.52 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=26.1
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|.|+ |..|...+..|+++|++|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 31 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVG 31 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEE
Confidence 367999998 99999999999999999875
No 449
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.48 E-value=0.036 Score=39.64 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE 74 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~ 74 (81)
..++|+|||+|.+|+..|..|++.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~ 169 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTD 169 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhh
Confidence 467999999999999999999974
No 450
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.48 E-value=0.048 Score=36.65 Aligned_cols=30 Identities=23% Similarity=0.123 Sum_probs=26.8
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|.|| |..|...+..|.++|++|++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 54 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIG 54 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 3578999996 99999999999999999875
No 451
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.43 E-value=0.041 Score=36.68 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=25.9
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||+ |..|...|..|++.|++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~ 40 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAA 40 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence 48999999 99999999999999998875
No 452
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.42 E-value=0.055 Score=36.22 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=25.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
.+ +++|+|+|-+|.+++..|.+.|. +++|
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v 137 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWV 137 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEE
Confidence 35 89999999999999999999998 6665
No 453
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.42 E-value=0.037 Score=37.62 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+||.+||-|..|...|..|+++||+|++
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v 33 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVV 33 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEE
Confidence 35899999999999999999999999986
No 454
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.41 E-value=0.034 Score=41.59 Aligned_cols=30 Identities=27% Similarity=0.138 Sum_probs=27.2
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVG--SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG--~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+||| +|..|+.+|.+|++.|.+|++
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtl 553 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSI 553 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEE
Confidence 356899999 999999999999999999876
No 455
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=94.40 E-value=0.049 Score=35.16 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=27.5
Q ss_pred CccCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 48 TLRTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 48 ~~~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.....++++|.|+ |-.|...|..|+++|++|++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~ 43 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVII 43 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 3456788999997 45899999999999999875
No 456
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.37 E-value=0.058 Score=35.66 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=25.0
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+++|||+|-.|...|..|.+.|++|++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v 144 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWV 144 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 899999999999999999999987765
No 457
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.34 E-value=0.029 Score=40.32 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=25.6
Q ss_pred CcEEEECCCHHHHHHHHHHhHc--CCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKE--AGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~--g~~v~v 80 (81)
.+|.|||.|..|+..|..|+++ |++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~ 35 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTV 35 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEE
Confidence 4799999999999999999999 788875
No 458
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=94.33 E-value=0.16 Score=35.25 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=28.5
Q ss_pred ccCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 49 LRTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 49 ~~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.-.++++.|||-|..|...|..|...|++|+.
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~ 165 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGMHVIG 165 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCCEEEE
Confidence 34578999999999999999999999998864
No 459
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.31 E-value=0.043 Score=36.55 Aligned_cols=28 Identities=32% Similarity=0.319 Sum_probs=25.8
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|++.|++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~ 32 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYA 32 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEE
Confidence 5799999999999999999999998865
No 460
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.24 E-value=0.025 Score=38.58 Aligned_cols=28 Identities=39% Similarity=0.431 Sum_probs=25.5
Q ss_pred CcEEEECCCHHHHHHHHHHhHcC-------CCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEA-------GTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g-------~~v~v 80 (81)
.+|.|||+|..|...|..|++.| ++|++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~ 43 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTM 43 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEE
Confidence 47999999999999999999999 88765
No 461
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.20 E-value=0.059 Score=37.31 Aligned_cols=29 Identities=28% Similarity=0.307 Sum_probs=25.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
..+|.|||+|..|.+.|..|++.|+ ++.+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l 34 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVL 34 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 3589999999999999999999998 5443
No 462
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.19 E-value=0.053 Score=39.27 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=25.5
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||.|..|...|..|+++|++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v 29 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAV 29 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEE
Confidence 699999999999999999999999875
No 463
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.19 E-value=0.056 Score=38.34 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=27.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++|+|+|+|..|...+..+.+.|++|++
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v 63 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAV 63 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999875
No 464
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=94.18 E-value=0.071 Score=37.40 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=26.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|+|+|..|...+..+.+.|++|++
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~ 47 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVA 47 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 346899999999999999999999999864
No 465
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.17 E-value=0.056 Score=35.70 Aligned_cols=27 Identities=15% Similarity=0.255 Sum_probs=25.0
Q ss_pred cEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|.|+ |..|...+..|+++|++|++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~ 29 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVV 29 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEE
Confidence 6999999 99999999999999999865
No 466
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.12 E-value=0.059 Score=35.36 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=25.2
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCC-eee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGT-ELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~-v~v 80 (81)
.+|.|||+|..|...|..|++.|++ |.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~ 39 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQV 39 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEE
Confidence 4799999999999999999999998 554
No 467
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=94.12 E-value=0.05 Score=37.35 Aligned_cols=27 Identities=19% Similarity=0.034 Sum_probs=24.8
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|+|+|+|..|...+..+.+.|+++++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~ 27 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRF 27 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEE
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 589999999999999999999998764
No 468
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.11 E-value=0.057 Score=39.66 Aligned_cols=31 Identities=32% Similarity=0.470 Sum_probs=27.8
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+++|+|+|.|..|..+|..|...|.+|++
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv 302 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSV 302 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEE
Confidence 3568999999999999999999999998765
No 469
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=94.10 E-value=0.061 Score=34.33 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.0
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
++++|.|+ |..|...|..|+++|++|++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~ 30 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIG 30 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEE
Confidence 46899987 88999999999999999875
No 470
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.09 E-value=0.042 Score=36.27 Aligned_cols=26 Identities=35% Similarity=0.479 Sum_probs=24.1
Q ss_pred cEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
+|.|||+|..|...|..|++ |++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~ 28 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLV 28 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEE
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEE
Confidence 69999999999999999999 999875
No 471
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.09 E-value=0.057 Score=39.05 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=26.0
Q ss_pred CcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+|.|||.|..|...|..|+++|++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v 30 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCA 30 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEE
Confidence 4799999999999999999999999875
No 472
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.08 E-value=0.057 Score=37.00 Aligned_cols=29 Identities=28% Similarity=0.166 Sum_probs=25.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
..+|.|||.|..|.+.|..|++.|+ +|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~ 63 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG 63 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE
Confidence 3689999999999999999999999 6654
No 473
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.07 E-value=0.05 Score=37.27 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=24.0
Q ss_pred cEEEECCCHHHHHHHHHHhHcCC--Ceee
Q psy11001 54 KVAIVGSGPSGLGAAHQLNKEAG--TELI 80 (81)
Q Consensus 54 ~v~viG~G~aG~~~A~~L~~~g~--~v~v 80 (81)
+|.|||+|..|.+.|..|+++|+ ++.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L 30 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIAL 30 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEE
Confidence 69999999999999999999998 5554
No 474
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.06 E-value=0.057 Score=38.73 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=26.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC-Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG-TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~-~v~v 80 (81)
...+|+|+|+|.+|..+|..|...|. ++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v 221 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVA 221 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEE
Confidence 45799999999999999999999998 4544
No 475
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.06 E-value=0.063 Score=37.92 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=28.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++++|+|.|..|..+|..|...|.+|++
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvv 203 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLV 203 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 3578999999999999999999999999874
No 476
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.03 E-value=0.025 Score=36.57 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=24.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+++|+|+|..|...|..|.+.|+ |++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~v 36 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVL 36 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEE
Confidence 4689999999999999999999998 765
No 477
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.03 E-value=0.078 Score=37.01 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=26.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+|.|||.|..|-+.|..|.++|++|++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~ 36 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFG 36 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEE
Confidence 36799999999999999999999999875
No 478
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.99 E-value=0.041 Score=34.74 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=25.5
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|.|| |..|...+..|+++|++|++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~ 33 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTA 33 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEE
Confidence 68999995 99999999999999998875
No 479
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.97 E-value=0.067 Score=35.97 Aligned_cols=30 Identities=20% Similarity=0.291 Sum_probs=26.5
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
..++|+|.|+ |..|...+..|+++|++|++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 56 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 56 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEE
Confidence 4578999998 99999999999999999874
No 480
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=93.94 E-value=0.056 Score=37.52 Aligned_cols=31 Identities=32% Similarity=0.385 Sum_probs=27.3
Q ss_pred cCCCcEEEECCC-HHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSG-PSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G-~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++++|||.| ..|..+|..|.++|..|++
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv 194 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTI 194 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEE
Confidence 467899999965 5899999999999999886
No 481
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=93.94 E-value=0.056 Score=35.73 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=27.5
Q ss_pred CccCCCcEEEECCC-HHHHHHHHHHhHcCCCeee
Q psy11001 48 TLRTGKKVAIVGSG-PSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 48 ~~~~~~~v~viG~G-~aG~~~A~~L~~~g~~v~v 80 (81)
....+++++|.|++ --|...|..|+++|++|++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~ 43 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVS 43 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 34567889999984 4899999999999999875
No 482
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=93.94 E-value=0.075 Score=36.61 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=27.9
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++|.|||.|..|...|..|+..|++|++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~ 183 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFL 183 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 4567999999999999999999999999864
No 483
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.94 E-value=0.053 Score=39.63 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=26.0
Q ss_pred CCCcEEEECCCHHHHHH-HHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGA-AHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~-A~~L~~~g~~v~v 80 (81)
..++|.+||-|-+|+++ |..|.++|++|++
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~ 48 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTG 48 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEE
Confidence 45789999999999985 8889999999975
No 484
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.93 E-value=0.064 Score=37.71 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=27.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|+|+|..|...+..+.+.|++|++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~ 52 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNV 52 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999875
No 485
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.90 E-value=0.049 Score=38.03 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=27.3
Q ss_pred cCCCcEEEECCC-HHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSG-PSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G-~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++++|||+| ..|..+|..|.++|.+|++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv 206 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYS 206 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEE
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEE
Confidence 357899999999 5799999999999988875
No 486
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=93.89 E-value=0.071 Score=35.25 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=25.3
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|.|| |..|...+..|+++|++|++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~ 30 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNT 30 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEE
Confidence 67999995 99999999999999999864
No 487
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.89 E-value=0.082 Score=35.39 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=25.4
Q ss_pred CcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 53 KKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 53 ~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
++|+|.|+ |..|...+..|+++|++|++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 31 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVV 31 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 57999986 99999999999999999875
No 488
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.89 E-value=0.062 Score=35.37 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=25.9
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|.|| |..|...+..|+++|++|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 31 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYA 31 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEE
Confidence 357999997 99999999999999999865
No 489
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=93.86 E-value=0.08 Score=33.81 Aligned_cols=30 Identities=13% Similarity=0.276 Sum_probs=26.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|.|+ |..|...|..|+++|++|++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~ 36 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVA 36 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 3578999998 78999999999999999875
No 490
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.83 E-value=0.055 Score=32.17 Aligned_cols=28 Identities=36% Similarity=0.439 Sum_probs=23.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHc-CCCe
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKE-AGTE 78 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~-g~~v 78 (81)
..++++|+|+|..|...+..|.+. ||++
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~v 31 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHP 31 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEE
Confidence 357899999999999999998875 6664
No 491
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.83 E-value=0.079 Score=35.76 Aligned_cols=29 Identities=24% Similarity=0.173 Sum_probs=26.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|.|+ |..|...+..|.+.|++|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~ 39 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYI 39 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEE
Confidence 468999999 99999999999999999875
No 492
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=93.82 E-value=0.082 Score=33.82 Aligned_cols=30 Identities=20% Similarity=0.428 Sum_probs=26.3
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|.|+ |..|...|..|+++|++|++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~ 36 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVA 36 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 3578999998 78999999999999999875
No 493
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=93.81 E-value=0.061 Score=37.11 Aligned_cols=31 Identities=23% Similarity=0.175 Sum_probs=27.3
Q ss_pred cCCCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++++|||. +..|..+|..|+++|..|++
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv 190 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTV 190 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEE
Confidence 35789999995 56999999999999999876
No 494
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.80 E-value=0.079 Score=36.16 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=27.0
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
..+.+|+|+|+|..|+.++..+...|.+|+.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~ 205 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSV 205 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEE
Confidence 3467999999999999999999999998764
No 495
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.79 E-value=0.062 Score=33.59 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=26.1
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVG-SGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG-~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++|+|+| +|..|..++..++..|.+|++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~ 68 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYT 68 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEE
Confidence 457899999 599999999999999998764
No 496
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=93.78 E-value=0.058 Score=39.38 Aligned_cols=30 Identities=23% Similarity=0.421 Sum_probs=24.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
.+++++|+|+|-+|.++|..|++.|.+|++
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~~V~i 392 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGAKVVI 392 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC-CEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 357899999999999999999999998765
No 497
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.78 E-value=0.081 Score=35.68 Aligned_cols=29 Identities=24% Similarity=0.062 Sum_probs=26.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHhHcCCCeee
Q psy11001 52 GKKVAIVGS-GPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 52 ~~~v~viG~-G~aG~~~A~~L~~~g~~v~v 80 (81)
.++|+|.|+ |..|...+..|+++|++|++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 56 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVG 56 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 468999998 99999999999999999875
No 498
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.76 E-value=0.08 Score=38.40 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=26.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhHcCC---Ceee
Q psy11001 51 TGKKVAIVGSGPSGLGAAHQLNKEAG---TELI 80 (81)
Q Consensus 51 ~~~~v~viG~G~aG~~~A~~L~~~g~---~v~v 80 (81)
...+++|+|+|-||.++|..|.+.|. +++|
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~v 217 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRV 217 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEE
Confidence 35789999999999999999999998 4554
No 499
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=93.74 E-value=0.08 Score=36.59 Aligned_cols=31 Identities=26% Similarity=0.276 Sum_probs=27.8
Q ss_pred cCCCcEEEECCCHHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSGPSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++|.|||.|..|...|..|+..|++|++
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~ 178 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILY 178 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEE
Confidence 3567999999999999999999999998865
No 500
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=93.70 E-value=0.067 Score=37.17 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=27.9
Q ss_pred cCCCcEEEECCC-HHHHHHHHHHhHcCCCeee
Q psy11001 50 RTGKKVAIVGSG-PSGLGAAHQLNKEAGTELI 80 (81)
Q Consensus 50 ~~~~~v~viG~G-~aG~~~A~~L~~~g~~v~v 80 (81)
-.+++++|||+| ..|..+|..|.++|..|++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv 194 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTT 194 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEE
Confidence 357899999999 5899999999999999886
Done!