Your job contains 1 sequence.
>psy11001
FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS
GPSGLGAAHQLNKEAGTELIK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11001
(81 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036663 - symbol:CG9674 species:7227 "Drosophila m... 354 1.1e-30 1
CGD|CAL0000516 - symbol:GLT1 species:5476 "Candida albica... 309 6.8e-26 1
WB|WBGene00012326 - symbol:W07E11.1 species:6239 "Caenorh... 306 1.5e-25 1
TAIR|locus:2178461 - symbol:GLT1 "NADH-dependent glutamat... 293 3.6e-24 1
ASPGD|ASPL0000027159 - symbol:gltA species:162425 "Emeric... 292 4.4e-24 1
UNIPROTKB|Q0JKD0 - symbol:LOC_Os01g48960 "Glutamate synth... 289 9.3e-24 1
TIGR_CMR|CPS_0762 - symbol:CPS_0762 "glutamate synthase, ... 269 9.1e-23 1
UNIPROTKB|P96219 - symbol:gltD "Glutamate synthase [NADPH... 259 1.1e-21 1
POMBASE|SPAPB1E7.07 - symbol:glt1 "glutamate synthase Glt... 269 1.2e-21 1
UNIPROTKB|Q9KPJ3 - symbol:VC_2374 "Glutamate synthase, sm... 258 1.4e-21 1
TIGR_CMR|VC_2374 - symbol:VC_2374 "glutamate synthase, sm... 258 1.4e-21 1
SGD|S000002330 - symbol:GLT1 "NAD(+)-dependent glutamate ... 250 1.3e-19 1
UNIPROTKB|Q5HXE8 - symbol:gltD "Glutamate synthase, small... 209 3.1e-16 1
TIGR_CMR|CJE_0008 - symbol:CJE_0008 "glutamate synthase, ... 209 3.1e-16 1
UNIPROTKB|P09832 - symbol:gltD "glutamate synthase, small... 175 1.5e-12 1
UNIPROTKB|Q9KPJ0 - symbol:VC_2377 "Glutamate synthase, sm... 173 2.4e-12 1
TIGR_CMR|VC_2377 - symbol:VC_2377 "glutamate synthase, sm... 173 2.4e-12 1
TIGR_CMR|CPS_4502 - symbol:CPS_4502 "glutamate synthase, ... 173 2.5e-12 1
UNIPROTKB|Q4KJI5 - symbol:gltD "Glutamate synthase, small... 171 4.0e-12 1
TIGR_CMR|SO_1324 - symbol:SO_1324 "glutamate synthase, sm... 162 3.7e-11 1
UNIPROTKB|P37127 - symbol:aegA species:83333 "Escherichia... 159 1.4e-10 1
TIGR_CMR|SPO_3770 - symbol:SPO_3770 "glutamate synthase, ... 156 1.7e-10 1
UNIPROTKB|Q46820 - symbol:ygfT "fused predicted oxidoredu... 153 5.8e-10 1
TIGR_CMR|DET_0866 - symbol:DET_0866 "hydrogenase subunit,... 149 9.3e-10 1
UNIPROTKB|Q0C617 - symbol:gltD "Glutamate synthase, small... 142 5.7e-09 1
TIGR_CMR|CHY_1991 - symbol:CHY_1991 "glutamate synthase (... 132 6.5e-08 1
TIGR_CMR|SO_0988 - symbol:SO_0988 "formate dehydrogenase,... 133 2.2e-07 1
TIGR_CMR|DET_0038 - symbol:DET_0038 "glutamate synthase (... 121 1.0e-06 1
UNIPROTKB|Q74FU5 - symbol:sfrB "NADPH oxidoreductase, bet... 119 2.8e-06 1
TIGR_CMR|GSU_0510 - symbol:GSU_0510 "Fe(III) reductase, b... 119 2.8e-06 1
TIGR_CMR|GSU_3057 - symbol:GSU_3057 "glutamate synthase (... 112 9.5e-06 1
TIGR_CMR|SPO_1776 - symbol:SPO_1776 "pyridine nucleotide-... 108 2.4e-05 1
>FB|FBgn0036663 [details] [associations]
symbol:CG9674 species:7227 "Drosophila melanogaster"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0016040 "glutamate synthase
(NADH) activity" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 InterPro:IPR016040 EMBL:AE014296
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0004355
GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 HSSP:P55038
UniGene:Dm.11253 GeneID:39878 KEGG:dme:Dmel_CG9674
FlyBase:FBgn0036663 ChiTaRS:CG9674 GenomeRNAi:39878 NextBio:815851
EMBL:AY094734 RefSeq:NP_648922.1 RefSeq:NP_788517.1 IntAct:Q9VVA4
MINT:MINT-312597 STRING:Q9VVA4 EnsemblMetazoa:FBtr0075341
EnsemblMetazoa:FBtr0075344 UCSC:CG9674-RA InParanoid:Q9VVA4
Uniprot:Q9VVA4
Length = 2114
Score = 354 (129.7 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 66/76 (86%), Positives = 72/76 (94%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEG+CVLGI+EPAVTIKNIECAIIDHAFEQGWIKPEIP +RTGK+VAIVGS
Sbjct: 1715 FTGRVCPAPCEGSCVLGISEPAVTIKNIECAIIDHAFEQGWIKPEIPEVRTGKRVAIVGS 1774
Query: 61 GPSGLGAAHQLNKEAG 76
GPSGL A+ QLN+ AG
Sbjct: 1775 GPSGLAASQQLNR-AG 1789
>CGD|CAL0000516 [details] [associations]
symbol:GLT1 species:5476 "Candida albicans" [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
InterPro:IPR000583 InterPro:IPR001327 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310
Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 EMBL:AACQ01000038
SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
GO:GO:0016040 TIGRFAMs:TIGR01317 RefSeq:XP_718760.1
ProteinModelPortal:Q5AAQ5 STRING:Q5AAQ5 GeneID:3639651
KEGG:cal:CaO19.13636 CGD:CAL0069988 Uniprot:Q5AAQ5
Length = 2126
Score = 309 (113.8 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 57/76 (75%), Positives = 63/76 (82%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGR+CPAPC GACVLGINE V IK++ECAIIDH FEQGWIKP P RTGK VA++GS
Sbjct: 1715 FTGRICPAPCNGACVLGINEDPVNIKSVECAIIDHGFEQGWIKPTPPAHRTGKTVAVIGS 1774
Query: 61 GPSGLGAAHQLNKEAG 76
GP+GL AA QLNK AG
Sbjct: 1775 GPAGLAAADQLNK-AG 1789
>WB|WBGene00012326 [details] [associations]
symbol:W07E11.1 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0015930 "glutamate synthase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 GeneTree:ENSGT00500000044896
Gene3D:2.160.20.60 SUPFAM:SSF69336 EMBL:Z49868 GO:GO:0016040
TIGRFAMs:TIGR01317 OMA:PPAWQSN EMBL:Z49889 RefSeq:NP_509693.2
ProteinModelPortal:G5EF05 SMR:G5EF05 EnsemblMetazoa:W07E11.1
GeneID:181223 KEGG:cel:CELE_W07E11.1 CTD:181223 WormBase:W07E11.1
Uniprot:G5EF05
Length = 2175
Score = 306 (112.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 57/80 (71%), Positives = 65/80 (81%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEGAC LGI PAVTIK+IECAIID+AF QGW+KP P TGK++AI+GS
Sbjct: 1763 FTGRVCPAPCEGACTLGIGSPAVTIKSIECAIIDYAFMQGWMKPCKPAFNTGKRIAIIGS 1822
Query: 61 GPSGLGAAHQLNKEAGTELI 80
GPSGLGAA QL K T ++
Sbjct: 1823 GPSGLGAAAQLVKVGHTVVV 1842
>TAIR|locus:2178461 [details] [associations]
symbol:GLT1 "NADH-dependent glutamate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA;IMP] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA]
[GO:0015930 "glutamate synthase activity" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016638
"oxidoreductase activity, acting on the CH-NH2 group of donors"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0042128 "nitrate assimilation" evidence=TAS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009536 "plastid" evidence=TAS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0009570
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
EMBL:AB020754 GO:GO:0051538 GO:GO:0006537 GO:GO:0048589
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
ProtClustDB:CLSN2683760 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OMA:WMAARQA HSSP:P55038
EMBL:AY099795 EMBL:AK222185 EMBL:AK230382 IPI:IPI00521970
RefSeq:NP_001190529.1 RefSeq:NP_001190530.1 RefSeq:NP_200158.2
UniGene:At.67093 UniGene:At.8951 ProteinModelPortal:Q9LV03
SMR:Q9LV03 STRING:Q9LV03 PaxDb:Q9LV03 PRIDE:Q9LV03
EnsemblPlants:AT5G53460.1 EnsemblPlants:AT5G53460.2
EnsemblPlants:AT5G53460.3 GeneID:835427 KEGG:ath:AT5G53460
TAIR:At5g53460 InParanoid:Q9LV03 PhylomeDB:Q9LV03 BRENDA:1.4.1.14
Genevestigator:Q9LV03 Uniprot:Q9LV03
Length = 2208
Score = 293 (108.2 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 55/73 (75%), Positives = 62/73 (84%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEG+CVLGI E V+IK+IECAIID AFE+GW+ P P RTGKKVAI+GS
Sbjct: 1794 FTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPLKRTGKKVAIIGS 1853
Query: 61 GPSGLGAAHQLNK 73
GP+GL AA QLNK
Sbjct: 1854 GPAGLAAADQLNK 1866
>ASPGD|ASPL0000027159 [details] [associations]
symbol:gltA species:162425 "Emericella nidulans"
[GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISA;RCA;IMP] [GO:0009064 "glutamine family amino acid
metabolic process" evidence=IGI;RCA;IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 EMBL:BN001305
GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0016040 TIGRFAMs:TIGR01317
OMA:WMAARQA ProteinModelPortal:C8VEZ6 EnsemblFungi:CADANIAT00003118
Uniprot:C8VEZ6
Length = 2126
Score = 292 (107.8 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 54/73 (73%), Positives = 60/73 (82%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEGACVLGINE V IK+IECAIID FE GW+ P P +RTGK VAI+GS
Sbjct: 1706 FTGRVCPAPCEGACVLGINEDPVGIKSIECAIIDRGFEMGWMVPRPPPVRTGKTVAIIGS 1765
Query: 61 GPSGLGAAHQLNK 73
GP+GL AA QLN+
Sbjct: 1766 GPAGLAAADQLNR 1778
>UNIPROTKB|Q0JKD0 [details] [associations]
symbol:LOC_Os01g48960 "Glutamate synthase 1 [NADH],
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0006537 "glutamate biosynthetic process" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0060359 "response to ammonium ion"
evidence=IEP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0009507 GO:GO:0009536
Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660 GO:GO:0051538
GO:GO:0006537 GO:GO:0048589 eggNOG:COG0493 Gene3D:1.10.1060.10
EMBL:AP008207 GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 GO:GO:0060359 SUPFAM:SSF46548 Gene3D:2.160.20.60
SUPFAM:SSF69336 EMBL:AB008845 RefSeq:NP_001043884.1
UniGene:Os.12738 ProteinModelPortal:Q0JKD0 STRING:Q0JKD0
PRIDE:Q0JKD0 GeneID:4324398 KEGG:osa:4324398 Gramene:Q0JKD0
KO:K00264 OMA:IEKHIAY ProtClustDB:CLSN2683760 GO:GO:0016040
GO:GO:0097054 TIGRFAMs:TIGR01317 Uniprot:Q0JKD0
Length = 2167
Score = 289 (106.8 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 54/73 (73%), Positives = 61/73 (83%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEG+CVLGI E V+IK+IECAIID FE+GW+ P P RTGKKVAI+GS
Sbjct: 1755 FTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKGFEEGWMVPRPPLQRTGKKVAIIGS 1814
Query: 61 GPSGLGAAHQLNK 73
GP+GL AA QLNK
Sbjct: 1815 GPAGLAAADQLNK 1827
>TIGR_CMR|CPS_0762 [details] [associations]
symbol:CPS_0762 "glutamate synthase, NADH/NADPH, small
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 GO:GO:0016639 Gene3D:1.10.1060.10 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 RefSeq:YP_267511.1 ProteinModelPortal:Q488K3
STRING:Q488K3 GeneID:3520782 KEGG:cps:CPS_0762 PATRIC:21464835
OMA:WAEGWVK BioCyc:CPSY167879:GI48-848-MONOMER Uniprot:Q488K3
Length = 496
Score = 269 (99.8 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 52/76 (68%), Positives = 60/76 (78%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEGACVLGIN V IK E IIDHAF++GW+ + P+ RTGK VA++GS
Sbjct: 102 FTGRVCPAPCEGACVLGINADPVAIKLHEKEIIDHAFKEGWVVAQPPSARTGKNVAVIGS 161
Query: 61 GPSGLGAAHQLNKEAG 76
GP+GL AA QLNK AG
Sbjct: 162 GPAGLAAAAQLNK-AG 176
>UNIPROTKB|P96219 [details] [associations]
symbol:gltD "Glutamate synthase [NADPH] small chain"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
UniPathway:UPA00634 InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0046872 EMBL:BX842584 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 GO:GO:0097054 TIGRFAMs:TIGR01317
KO:K00266 ProtClustDB:PRK12810 PIR:G70655 RefSeq:NP_218375.1
RefSeq:NP_338527.1 RefSeq:YP_006517358.1 HSSP:Q39243
ProteinModelPortal:P96219 SMR:P96219 PRIDE:P96219
EnsemblBacteria:EBMYCT00000002545 EnsemblBacteria:EBMYCT00000069396
GeneID:13317485 GeneID:886196 GeneID:922550 KEGG:mtc:MT3973
KEGG:mtu:Rv3858c KEGG:mtv:RVBD_3858c PATRIC:18130493
TubercuList:Rv3858c HOGENOM:HOG000031443 OMA:QIMPKEP Uniprot:P96219
Length = 488
Score = 259 (96.2 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 48/77 (62%), Positives = 58/77 (75%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGR+CPAPCE ACVLGIN+ VTIK IE IID AF++GW++P P TG+ VA+VGS
Sbjct: 93 FTGRLCPAPCEPACVLGINQDPVTIKQIELEIIDKAFDEGWVQPRPPRKLTGQTVAVVGS 152
Query: 61 GPSGLGAAHQLNKEAGT 77
GP+GL AA QL + T
Sbjct: 153 GPAGLAAAQQLTRAGHT 169
>POMBASE|SPAPB1E7.07 [details] [associations]
symbol:glt1 "glutamate synthase Glt1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=ISO] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 PomBase:SPAPB1E7.07 GO:GO:0005829 GO:GO:0005739
EMBL:CU329670 Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660
GO:GO:0051538 GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10
GO:GO:0004355 GO:GO:0010181 GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 EMBL:D89165 PIR:T42527
RefSeq:NP_594133.1 ProteinModelPortal:Q9C102 STRING:Q9C102
PRIDE:Q9C102 EnsemblFungi:SPAPB1E7.07.1 GeneID:2543509
KEGG:spo:SPAPB1E7.07 HOGENOM:HOG000031559 OMA:PPAWQSN
OrthoDB:EOG444PTC NextBio:20804519 Uniprot:Q9C102
Length = 2111
Score = 269 (99.8 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 52/80 (65%), Positives = 63/80 (78%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEGAC LGI E V IK++E AIID A+E+GWI P P RTG++VAI+GS
Sbjct: 1704 FTGRVCPAPCEGACTLGIIESPVGIKSVERAIIDKAWEEGWIVPRPPAERTGRRVAIIGS 1763
Query: 61 GPSGLGAAHQLNKEAGTELI 80
GP+GL AA QLN+ AG ++
Sbjct: 1764 GPAGLAAADQLNR-AGHHVV 1782
>UNIPROTKB|Q9KPJ3 [details] [associations]
symbol:VC_2374 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 258 (95.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 47/72 (65%), Positives = 58/72 (80%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCE ACVLGIN+ +TI NIE I++ A+++G+ KP+ P RTGK VAI+GS
Sbjct: 93 FTGRVCPAPCETACVLGINQDPITICNIEKTIVERAYQEGYAKPKTPRSRTGKTVAIIGS 152
Query: 61 GPSGLGAAHQLN 72
GP+GL AA QLN
Sbjct: 153 GPAGLAAAEQLN 164
>TIGR_CMR|VC_2374 [details] [associations]
symbol:VC_2374 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006005
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 258 (95.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 47/72 (65%), Positives = 58/72 (80%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCE ACVLGIN+ +TI NIE I++ A+++G+ KP+ P RTGK VAI+GS
Sbjct: 93 FTGRVCPAPCETACVLGINQDPITICNIEKTIVERAYQEGYAKPKTPRSRTGKTVAIIGS 152
Query: 61 GPSGLGAAHQLN 72
GP+GL AA QLN
Sbjct: 153 GPAGLAAAEQLN 164
>SGD|S000002330 [details] [associations]
symbol:GLT1 "NAD(+)-dependent glutamate synthase (GOGAT)"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0015930
"glutamate synthase activity" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0045181 "glutamate synthase
activity, NAD(P)H as acceptor" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA;IEP] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=IEA;IMP;IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097054 "L-glutamate biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016638 "oxidoreductase activity, acting
on the CH-NH2 group of donors" evidence=IEA] InterPro:IPR000583
InterPro:IPR001327 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 InterPro:IPR016040
SGD:S000002330 GO:GO:0005739 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 EMBL:BK006938 GO:GO:0051538
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 EMBL:Z67750
GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278
SUPFAM:SSF46548 GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60
SUPFAM:SSF69336 KO:K00264 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OrthoDB:EOG444PTC
EMBL:X89221 EMBL:Z74219 PIR:S61041 RefSeq:NP_010110.1
ProteinModelPortal:Q12680 SMR:Q12680 DIP:DIP-6490N IntAct:Q12680
MINT:MINT-647261 STRING:Q12680 PaxDb:Q12680 PeptideAtlas:Q12680
PRIDE:Q12680 EnsemblFungi:YDL171C GeneID:851383 KEGG:sce:YDL171C
CYGD:YDL171c OMA:WMAARQA BioCyc:MetaCyc:MONOMER-13146
SABIO-RK:Q12680 NextBio:968525 Genevestigator:Q12680
GermOnline:YDL171C Uniprot:Q12680
Length = 2145
Score = 250 (93.1 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 47/77 (61%), Positives = 57/77 (74%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCEGAC LGI E V IK++E IID+AF++GWIKP P+ RTG V ++GS
Sbjct: 1731 FTGRVCPAPCEGACTLGIIEDPVGIKSVERIIIDNAFKEGWIKPCPPSTRTGFTVGVIGS 1790
Query: 61 GPSGLGAAHQLNKEAGT 77
GP+GL A LN+ T
Sbjct: 1791 GPAGLACADMLNRAGHT 1807
>UNIPROTKB|Q5HXE8 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 GO:GO:0050660
GO:GO:0051536 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006537
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 OMA:WAEGWVK RefSeq:YP_178037.1
ProteinModelPortal:Q5HXE8 STRING:Q5HXE8 GeneID:3230664
KEGG:cjr:CJE0008 PATRIC:20041705 BioCyc:CJEJ195099:GJC0-8-MONOMER
Uniprot:Q5HXE8
Length = 481
Score = 209 (78.6 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCE +CV IN +V+IKN E +II++AF++ ++ P GKK+A++GS
Sbjct: 101 FTGRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAVIGS 160
Query: 61 GPSGLGAAHQLN 72
GP+GL A+ LN
Sbjct: 161 GPAGLACANTLN 172
>TIGR_CMR|CJE_0008 [details] [associations]
symbol:CJE_0008 "glutamate synthase, small subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 GO:GO:0050660
GO:GO:0051536 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006537
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 OMA:WAEGWVK RefSeq:YP_178037.1
ProteinModelPortal:Q5HXE8 STRING:Q5HXE8 GeneID:3230664
KEGG:cjr:CJE0008 PATRIC:20041705 BioCyc:CJEJ195099:GJC0-8-MONOMER
Uniprot:Q5HXE8
Length = 481
Score = 209 (78.6 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 1 FTGRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
FTGRVCPAPCE +CV IN +V+IKN E +II++AF++ ++ P GKK+A++GS
Sbjct: 101 FTGRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAVIGS 160
Query: 61 GPSGLGAAHQLN 72
GP+GL A+ LN
Sbjct: 161 GPAGLACANTLN 172
>UNIPROTKB|P09832 [details] [associations]
symbol:gltD "glutamate synthase, small subunit"
species:83333 "Escherichia coli K-12" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 PROSITE:PS51379 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U18997 GO:GO:0051539
GO:GO:0006537 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 GO:GO:0097054 EMBL:M18747 BRENDA:1.4.1.13
PIR:G65112 RefSeq:NP_417680.1 RefSeq:YP_491398.1
ProteinModelPortal:P09832 SMR:P09832 DIP:DIP-9803N IntAct:P09832
MINT:MINT-1248739 SWISS-2DPAGE:P09832 PaxDb:P09832 PRIDE:P09832
EnsemblBacteria:EBESCT00000004091 EnsemblBacteria:EBESCT00000017797
GeneID:12933433 GeneID:947723 KEGG:ecj:Y75_p3133 KEGG:eco:b3213
PATRIC:32121848 EchoBASE:EB0399 EcoGene:EG10404 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 BioCyc:EcoCyc:GLUSYNSMALL-MONOMER
BioCyc:ECOL316407:JW3180-MONOMER BioCyc:MetaCyc:GLUSYNSMALL-MONOMER
BioCyc:MOB3B:GLUSYNSMALL-MONOMER Genevestigator:P09832
Uniprot:P09832
Length = 472
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 39/74 (52%), Positives = 49/74 (66%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLR-TGKKVAIVG 59
GRVCP CEG+C L AVTI NIE I D AFE GW +P++ ++ TGKKVAI+G
Sbjct: 95 GRVCPQDRLCEGSCTLNDEFGAVTIGNIERYINDKAFEMGW-RPDMSGVKQTGKKVAIIG 153
Query: 60 SGPSGLGAAHQLNK 73
+GP+GL A L +
Sbjct: 154 AGPAGLACADVLTR 167
>UNIPROTKB|Q9KPJ0 [details] [associations]
symbol:VC_2377 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 173 (66.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/69 (56%), Positives = 47/69 (68%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLR-TGKKVAIVG 59
GRVCP CEG+C L + AVTI NIE I D AFE GW KP++ + T KKVAI+G
Sbjct: 96 GRVCPQDRLCEGSCTLNADFGAVTIGNIEKYITDTAFEMGW-KPDMSNVVWTDKKVAIIG 154
Query: 60 SGPSGLGAA 68
+GP+GL AA
Sbjct: 155 AGPAGLAAA 163
>TIGR_CMR|VC_2377 [details] [associations]
symbol:VC_2377 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 173 (66.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/69 (56%), Positives = 47/69 (68%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLR-TGKKVAIVG 59
GRVCP CEG+C L + AVTI NIE I D AFE GW KP++ + T KKVAI+G
Sbjct: 96 GRVCPQDRLCEGSCTLNADFGAVTIGNIEKYITDTAFEMGW-KPDMSNVVWTDKKVAIIG 154
Query: 60 SGPSGLGAA 68
+GP+GL AA
Sbjct: 155 AGPAGLAAA 163
>TIGR_CMR|CPS_4502 [details] [associations]
symbol:CPS_4502 "glutamate synthase, small subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 RefSeq:YP_271150.1
ProteinModelPortal:Q47VM2 STRING:Q47VM2 GeneID:3522364
KEGG:cps:CPS_4502 PATRIC:21471827
BioCyc:CPSY167879:GI48-4511-MONOMER Uniprot:Q47VM2
Length = 475
Score = 173 (66.0 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIP-TLRTGKKVAIVG 59
GRVCP CE AC L AVTI NIE I D A QGW KP + ++TGK+VA++G
Sbjct: 95 GRVCPQDRLCESACTLNDEFGAVTIGNIEKHITDTAIAQGW-KPNLSHVVKTGKRVAVIG 153
Query: 60 SGPSGLGAAHQLNKEAGTELI 80
+GP+G+G A L + G +++
Sbjct: 154 AGPAGIGCADVLTRN-GVDVV 173
>UNIPROTKB|Q4KJI5 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK12810 RefSeq:YP_257598.1 ProteinModelPortal:Q4KJI5
STRING:Q4KJI5 GeneID:3481045 KEGG:pfl:PFL_0454 PATRIC:19870053
OMA:NDFQFID BioCyc:PFLU220664:GIX8-455-MONOMER Uniprot:Q4KJI5
Length = 472
Score = 171 (65.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLR-TGKKVAIVG 59
GRVCP CEGAC L AVTI ++E I D AF GW +P++ ++ TGK+VAI+G
Sbjct: 98 GRVCPQDRLCEGACTLNDGFGAVTIGSVEKYITDTAFAMGW-RPDMSKVKPTGKRVAIIG 156
Query: 60 SGPSGLGAAHQLNKEAGTELI 80
+GP+GLG A L + T ++
Sbjct: 157 AGPAGLGCADVLVRGGVTPVV 177
>TIGR_CMR|SO_1324 [details] [associations]
symbol:SO_1324 "glutamate synthase, small subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
Pfam:PF00070 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006537
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK12810
OMA:NDFQFID RefSeq:NP_716944.1 ProteinModelPortal:Q8EHA5
GeneID:1169145 KEGG:son:SO_1324 PATRIC:23522304 Uniprot:Q8EHA5
Length = 468
Score = 162 (62.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 37/69 (53%), Positives = 45/69 (65%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGK-KVAIVG 59
GRVCP CEGAC L + AVTI N+E I D A QGW +P++ + K KVAIVG
Sbjct: 94 GRVCPQDRLCEGACTLNADFGAVTIGNVEKYITDTAIAQGW-RPDMSKVTPRKEKVAIVG 152
Query: 60 SGPSGLGAA 68
+GP+GLG A
Sbjct: 153 AGPAGLGCA 161
>UNIPROTKB|P37127 [details] [associations]
symbol:aegA species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009987 "cellular process"
evidence=ND] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR006006 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 InterPro:IPR017900
Prosite:PS00198 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 EMBL:L34011 PIR:C65022 RefSeq:NP_416963.1
RefSeq:YP_490695.1 ProteinModelPortal:P37127 SMR:P37127
DIP:DIP-9060N IntAct:P37127 PRIDE:P37127
EnsemblBacteria:EBESCT00000003403 EnsemblBacteria:EBESCT00000017287
GeneID:12931935 GeneID:947383 KEGG:ecj:Y75_p2420 KEGG:eco:b2468
PATRIC:32120319 EchoBASE:EB2308 EcoGene:EG12409
HOGENOM:HOG000031439 OMA:VESRYRY ProtClustDB:PRK12769
BioCyc:EcoCyc:EG12409-MONOMER BioCyc:ECOL316407:JW2452-MONOMER
Genevestigator:P37127 GO:GO:0016639 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 Uniprot:P37127
Length = 659
Score = 159 (61.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 2 TGRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTL-RTGKKVAIV 58
TGRVCP CEGAC + AVTI NIE I D A +GW +P++ + + K+VAI+
Sbjct: 275 TGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGW-RPDLSHVTKVDKRVAII 333
Query: 59 GSGPSGLGAAHQLNK 73
G+GP+GL A L +
Sbjct: 334 GAGPAGLACADVLTR 348
>TIGR_CMR|SPO_3770 [details] [associations]
symbol:SPO_3770 "glutamate synthase, small subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_168965.1 ProteinModelPortal:Q5LLZ4 GeneID:3196508
KEGG:sil:SPO3770 PATRIC:23381037 OMA:EFRIPIY Uniprot:Q5LLZ4
Length = 477
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 3 GRVCPAP--CEGACVLGIN-EPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVG 59
GR+CP CEG CV+ + VTI +E I D A++ GW+KP P + V I+G
Sbjct: 96 GRICPQDRLCEGNCVIEQSGHGTVTIGAVEKYITDTAWDMGWVKPASPVAERSESVGIIG 155
Query: 60 SGPSGLGAAHQLNKEAGTEL 79
+GP GL AA L ++AG ++
Sbjct: 156 AGPGGLAAADML-RQAGVQV 174
>UNIPROTKB|Q46820 [details] [associations]
symbol:ygfT "fused predicted oxidoreductase, Fe-S subunit
and nucleotide-binding subunit" species:83333 "Escherichia coli
K-12" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001327 InterPro:IPR001450 InterPro:IPR006006
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR023753
Pfam:PF00037 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 GO:GO:0016639
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 EMBL:U28375 PIR:G65072
RefSeq:NP_417363.2 RefSeq:YP_491088.1 ProteinModelPortal:Q46820
SMR:Q46820 DIP:DIP-12175N PRIDE:Q46820
EnsemblBacteria:EBESCT00000001813 EnsemblBacteria:EBESCT00000017804
GeneID:12933341 GeneID:949018 KEGG:ecj:Y75_p2819 KEGG:eco:b2887
PATRIC:32121182 EchoBASE:EB2881 EcoGene:EG13070 OMA:KVVPRIE
ProtClustDB:PRK12809 BioCyc:EcoCyc:G7506-MONOMER
BioCyc:ECOL316407:JW5469-MONOMER Genevestigator:Q46820
Uniprot:Q46820
Length = 639
Score = 153 (58.9 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 3 GRVCPAP--CEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIP-TLRTGKKVAIVG 59
GRVCP CEGAC L + AV+I N+E I D A GW +P++ + +KVA++G
Sbjct: 259 GRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGW-RPDVSKVVPRSEKVAVIG 317
Query: 60 SGPSGLGAAHQLNKEAGTEL 79
+GP+GLG A L + AG ++
Sbjct: 318 AGPAGLGCADILAR-AGVQV 336
>TIGR_CMR|DET_0866 [details] [associations]
symbol:DET_0866 "hydrogenase subunit, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008901
"ferredoxin hydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009375 "ferredoxin
hydrogenase complex" evidence=ISS] InterPro:IPR001268
InterPro:IPR012285 Pfam:PF00329 GO:GO:0051536 GO:GO:0008137
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0493
Gene3D:1.10.1060.10 RefSeq:YP_181592.1 ProteinModelPortal:Q3Z857
STRING:Q3Z857 GeneID:3229822 KEGG:det:DET0866 PATRIC:21608791
HOGENOM:HOG000275344 OMA:NIYLCAS ProtClustDB:CLSK837232
BioCyc:DETH243164:GJNF-867-MONOMER Uniprot:Q3Z857
Length = 461
Score = 149 (57.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 35/72 (48%), Positives = 44/72 (61%)
Query: 3 GRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGP 62
GRVC APCE AC G A++IK ++ A A+E G TGKKVA+VGSGP
Sbjct: 171 GRVCLAPCESACRQGKCGEAISIKQLKRA----AYEYGHYTDTATAKPTGKKVAVVGSGP 226
Query: 63 SGLGAAHQLNKE 74
+GL AA+ L K+
Sbjct: 227 AGLAAAYFLTKK 238
>UNIPROTKB|Q0C617 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR006006 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 EMBL:CP000158 GenomeReviews:CP000158_GR
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_758826.1 ProteinModelPortal:Q0C617 STRING:Q0C617
GeneID:4289253 KEGG:hne:HNE_0092 PATRIC:32212968 OMA:ANIDNEN
BioCyc:HNEP228405:GI69-139-MONOMER Uniprot:Q0C617
Length = 481
Score = 142 (55.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 3 GRVCPAP--CEGACVLGIN-EPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVG 59
GR+CP CEG C + + VTI ++E I D A+ +GWI+P P + I+G
Sbjct: 95 GRICPQDRLCEGICTIEQSGHGTVTIGSVEKYITDTAWAEGWIQPIKPPRERTQSAGIIG 154
Query: 60 SGPSGLGAAHQLNKE 74
+GP GL AA QL ++
Sbjct: 155 AGPGGLAAAEQLRRK 169
>TIGR_CMR|CHY_1991 [details] [associations]
symbol:CHY_1991 "glutamate synthase (NADPH),
homotetrameric" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004355 "glutamate synthase (NADPH) activity"
evidence=ISS] [GO:0006537 "glutamate biosynthetic process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749 RefSeq:YP_360810.1
ProteinModelPortal:Q3AAM4 STRING:Q3AAM4 GeneID:3728589
KEGG:chy:CHY_1991 PATRIC:21277069 OMA:AYRRTIN
BioCyc:CHYD246194:GJCN-1990-MONOMER InterPro:IPR006004
TIGRFAMs:TIGR01316 Uniprot:Q3AAM4
Length = 464
Score = 132 (51.5 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 32/73 (43%), Positives = 40/73 (54%)
Query: 3 GRVCP--APCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
GRVCP + CEG CVLG V I +E D+ +G + TGKKVA++GS
Sbjct: 91 GRVCPQESQCEGQCVLGKKGEPVAIGRLERFAADYELAKGTQNVTVAP-PTGKKVAVIGS 149
Query: 61 GPSGLGAAHQLNK 73
GP+GL A L K
Sbjct: 150 GPAGLTCAADLAK 162
>TIGR_CMR|SO_0988 [details] [associations]
symbol:SO_0988 "formate dehydrogenase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR001041 InterPro:IPR001327
InterPro:IPR001450 InterPro:IPR006478 InterPro:IPR006656
InterPro:IPR006657 InterPro:IPR006963 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 Pfam:PF00384 Pfam:PF01568
Pfam:PF04879 Pfam:PF12838 PROSITE:PS51085 PROSITE:PS51379
SMART:SM00926 InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198
Gene3D:3.40.50.720 GO:GO:0009055 GO:GO:0050660 GO:GO:0051536
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0030151 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0015942 GO:GO:0008863 GO:GO:0009326 HOGENOM:HOG000031440
KO:K00123 TIGRFAMs:TIGR01591 HSSP:P07658 RefSeq:NP_716617.1
ProteinModelPortal:Q8EI61 GeneID:1168830 KEGG:son:SO_0988
PATRIC:23521625 OMA:MTNDIPS ProtClustDB:CLSK906042 Uniprot:Q8EI61
Length = 1428
Score = 133 (51.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 3 GRVCPAPCEGACVLGINEPAVTIKNIE--CAIIDHAFEQGWIKPEIPTLR-TGKKVAIVG 59
GRVCPA CE C G+ + + I+ ++ A +D A ++ + P L TGKK+AI+G
Sbjct: 154 GRVCPAFCETECRRGLIDDPIAIRQLKRHAADLDLADDEHGNSYQPPRLADTGKKIAIIG 213
Query: 60 SGPSGLGAAHQLNKE 74
SGP+GL A + L+ +
Sbjct: 214 SGPAGLSAGYYLSNQ 228
>TIGR_CMR|DET_0038 [details] [associations]
symbol:DET_0038 "glutamate synthase (NADPH),
homotetrameric" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
InterPro:IPR006004 TIGRFAMs:TIGR01316 RefSeq:YP_180793.1
ProteinModelPortal:Q3ZAF6 STRING:Q3ZAF6 GeneID:3229074
KEGG:det:DET0038 PATRIC:21607179 OMA:CSANEFL
BioCyc:DETH243164:GJNF-38-MONOMER Uniprot:Q3ZAF6
Length = 465
Score = 121 (47.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 3 GRVCP--APCEGACVLGINEPAVTIKNIECAIID----HAFEQGWIKPEIPTLRTGKKVA 56
GRVCP CE AC+L E + I +E + D H+ E K P ++GKK A
Sbjct: 90 GRVCPQETQCEQACILNKKEAPIAIGRLERFVADWERGHSAEVNLPKSLKP--KSGKKAA 147
Query: 57 IVGSGPSGLGAAHQL 71
+VG+GP+GL AA +L
Sbjct: 148 VVGAGPAGLTAAAEL 162
>UNIPROTKB|Q74FU5 [details] [associations]
symbol:sfrB "NADPH oxidoreductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 119 (46.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 3 GRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGP 62
GRVCP PCE C + +V I ++ + D+ + P P + KKVAIVG+GP
Sbjct: 204 GRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMHNAAPPMQPKPQKNKKVAIVGAGP 263
Query: 63 SGLGAAHQLNKE 74
+GL A+ L E
Sbjct: 264 AGLACAYYLALE 275
>TIGR_CMR|GSU_0510 [details] [associations]
symbol:GSU_0510 "Fe(III) reductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 119 (46.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 3 GRVCPAPCEGACVLGINEPAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGSGP 62
GRVCP PCE C + +V I ++ + D+ + P P + KKVAIVG+GP
Sbjct: 204 GRVCPHPCETHCRRKNVDDSVNIMVLKRSASDYEWMHNAAPPMQPKPQKNKKVAIVGAGP 263
Query: 63 SGLGAAHQLNKE 74
+GL A+ L E
Sbjct: 264 AGLACAYYLALE 275
>TIGR_CMR|GSU_3057 [details] [associations]
symbol:GSU_3057 "glutamate synthase (NADPH),
homotetrameric" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000031439
Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
OMA:AYRRTIN InterPro:IPR006004 TIGRFAMs:TIGR01316
RefSeq:NP_954099.1 ProteinModelPortal:Q748E7 GeneID:2686900
KEGG:gsu:GSU3057 PATRIC:22028965
BioCyc:GSUL243231:GH27-2997-MONOMER Uniprot:Q748E7
Length = 470
Score = 112 (44.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 30/75 (40%), Positives = 40/75 (53%)
Query: 3 GRVCP--APCEGACVLGINEPAVTIKNIECAIIDHAFEQ-GWIKPEIPTLRTGKKVAIVG 59
GRVCP CE CV GI V I +E + D A + E TG++VA+VG
Sbjct: 97 GRVCPQETQCEARCVRGIKGEPVAIGYLERFVADWATANVAELGDEPLPPPTGRRVAVVG 156
Query: 60 SGPSGLGAAHQLNKE 74
GP+GL AA +L ++
Sbjct: 157 CGPAGLTAAGELARK 171
>TIGR_CMR|SPO_1776 [details] [associations]
symbol:SPO_1776 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008152 "metabolic process" evidence=ISS] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR000103 InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PRINTS:PR00469
InterPro:IPR016040 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK11749 RefSeq:YP_167013.1 ProteinModelPortal:Q5LSJ2
GeneID:3193113 KEGG:sil:SPO1776 PATRIC:23376877 OMA:PKPGGLN
Uniprot:Q5LSJ2
Length = 445
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 4 RVCPAP--CEGACVLGINE-PAVTIKNIECAIIDHAFEQGWIKPEIPTLRTGKKVAIVGS 60
RVCP CE ACV E V I ++ D +G + P +GK+VA+VG+
Sbjct: 93 RVCPTETLCEEACVREAAEGKPVEIGRLQRYATDTLMARG-VHPFTRAAPSGKRVAVVGA 151
Query: 61 GPSGLGAAHQL 71
GP+GL AH+L
Sbjct: 152 GPAGLACAHRL 162
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 81 81 0.00091 102 3 11 22 0.45 29
29 0.42 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 535 (57 KB)
Total size of DFA: 107 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 9.57u 0.08s 9.65t Elapsed: 00:00:12
Total cpu time: 9.57u 0.08s 9.65t Elapsed: 00:00:13
Start: Thu Aug 15 11:43:01 2013 End: Thu Aug 15 11:43:14 2013