BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11002
(195 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/83 (86%), Positives = 78/83 (93%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EFI+GVSQFSVKGDKE KLRFAFRIYDMD DG+ISNGELFQVLKMMVGNNLKD QLQQIV
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 119
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
DKTI+ ADKD DG+I+FEEFC+V
Sbjct: 120 DKTIINADKDGDGRISFEEFCAV 142
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/83 (86%), Positives = 78/83 (93%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EFI+GVSQFSVKGDKE KLRFAFRIYDMD DG+ISNGELFQVLKMMVGNNLKD QLQQIV
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
DKTI+ ADKD DG+I+FEEFC+V
Sbjct: 119 DKTIINADKDGDGRISFEEFCAV 141
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/83 (86%), Positives = 78/83 (93%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EFI+GVSQFSVKGDKE KLRFAFRIYDMD DG+ISNGELFQVLKMMVGNNLKD QLQQIV
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 132
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
DKTI+ ADKD DG+I+FEEFC+V
Sbjct: 133 DKTIINADKDGDGRISFEEFCAV 155
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/83 (86%), Positives = 78/83 (93%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EFI+GVSQFSVKGDKE KLRFAFRIYDMD DG+ISNGELFQVLKMMVGNNLKD QLQQIV
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
DKTI+ ADKD DG+I+FEEFC+V
Sbjct: 134 DKTIINADKDGDGRISFEEFCAV 156
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
+ +KL FAFR+YD+D D IS EL QVL+MMVG N+ D QL I D+TI AD+D D
Sbjct: 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 173 INFEEFCSV 181
I+F EF V
Sbjct: 171 ISFTEFVKV 179
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
+ +KL FAFR+YD+D D IS EL QVL+MMVG N+ D QL I D+TI AD+D D
Sbjct: 111 RSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 173 INFEEFCSV 181
I+F EF V
Sbjct: 171 ISFTEFVKV 179
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
+ +KL +AF++YD+D DG IS E+ QVL++MVG + + QL+ I D+T+ AD+D DG
Sbjct: 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGA 171
Query: 173 INFEEFC 179
++F EF
Sbjct: 172 VSFVEFT 178
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK---MMVGNNL----K 150
SEFIQ +S + +G + KLR+AF++YD+DNDG+I+ E+ ++ MVGN + +
Sbjct: 83 SEFIQALS-VTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEE 141
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFCSVSTA 184
+ ++ VD+ DK+ DGK+ +EF S A
Sbjct: 142 ENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ ++++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 368 EFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 422
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 365
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 366 FPEFLTM 372
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GFIS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF ++ TA
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 426
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 427 QVNYEEFVQMMTA 439
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 356
Query: 175 FEEF 178
F EF
Sbjct: 357 FPEF 360
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMV---GNNLKDAQL 154
EF + +S F + K+ F+F++YD+ GFI E+ Q++ + G NLKD +
Sbjct: 74 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 133
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSV 181
+ I+DKT AD DGKI+ EE+ S+
Sbjct: 134 EDIIDKTFEEADTKHDGKIDKEEWRSL 160
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 369 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 423
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 366
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 367 FPEFLTM 373
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 388
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 331
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 332 FPEFLTM 338
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 388
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 331
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 332 FPEFLTM 338
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 422
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 365
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 366 FPEFLTM 372
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 422
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 365
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 366 FPEFLTM 372
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 435
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 436 QVNYEEFVQMMTA 448
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 365
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 366 FPEFLTM 372
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 434
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 435 QVNYEEFVQMMTA 447
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 364
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 365 FPEFLTM 371
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 434
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 435 QVNYEEFVQMMTA 447
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 364
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 365 FPEFLTM 371
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 331 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 385
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 328
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 329 FPEFLTM 335
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 367 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 421
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 364
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 365 FPEFLTM 371
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 435
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 436 QVNYEEFVQMMTA 448
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 365
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 366 FPEFLTM 372
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTASI 186
D+ I AD D DG++N+EEF + TA +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMTAKL 150
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E KL+ AFR++D D +GFIS EL V+ NL + + V
Sbjct: 67 EFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF V A
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLNL 71
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMV---GNNLKDAQLQ 155
EF + +S F + K+ F+F++YD+ GFI E+ Q++ + G NLKD ++
Sbjct: 106 EFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 165
Query: 156 QIVDKTILFADKDEDGKINFEEFCSV 181
I+DKT AD DGKI+ EE+ S+
Sbjct: 166 DIIDKTFEEADTKHDGKIDKEEWRSL 191
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GFIS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF ++ T+
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GF+S EL V+ + G L D + V
Sbjct: 67 EFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRL-GEKLSDEE----V 121
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
D+ I AD D DG++N+EEF V
Sbjct: 122 DEMIRAADTDGDGQVNYEEFVRV 144
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+L+ ++ + D+D +G ++
Sbjct: 10 TEFKEAFSLFDKDGDGCITTRELGTVMRSL-GQNPTEAELRDMMSEI----DRDGNGTVD 64
Query: 175 FEEFCSV 181
F EF +
Sbjct: 65 FPEFLGM 71
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 56
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 57 QVNYEEFVQMMTA 69
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GFIS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF ++ T+
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 64 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 118
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 61
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 62 FPEFLTM 68
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +GFIS EL V+ NL + + VD+ I AD D DG
Sbjct: 78 DSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 132
Query: 172 KINFEEFCSVSTA 184
++N+EEF ++ T+
Sbjct: 133 QVNYEEFVTMMTS 145
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GFIS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVST 183
D+ I AD D DG++N+EEF ++ T
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMMT 147
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 69 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 123
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 124 DEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 66
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 67 FPEFLTM 73
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 117
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 118 DEMIREADIDGDGQVNYEEFVQMMTA 143
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 60
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 61 FPEFLTM 67
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 123 DQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 73 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 127
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 128 DEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 70
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 71 FPEFLTM 77
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 119
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 62
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 63 FPEFLTM 69
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 119
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 62
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 63 FPEFLTM 69
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEXLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEXLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 71 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 125
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 126 DEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 68
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 69 FPEFLTM 75
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 59
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 60 QVNYEEFVQMMTA 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 60
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 61 QVNYEEFVQMMTA 73
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF + TA
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 57
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 58 QVNYEEFVQMMTA 70
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L+ AFR++D D +GFIS EL V+ NL + + VD+ I AD D DG
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDG 55
Query: 172 KINFEEFCSVSTA 184
+IN+EEF V A
Sbjct: 56 QINYEEFVKVMMA 68
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E +L+ AFR++D D +GFIS EL V+ NL + + V
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG+IN+EEF V A
Sbjct: 123 DEMIREADVDGDGQINYEEFVKVMMA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D+ S+ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNG 62
Query: 172 KINFEEFCSV 181
I+F EF ++
Sbjct: 63 TIDFPEFLNL 72
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ ++ D E ++R AFR++D D +G+IS EL V + G L D + V
Sbjct: 67 EFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL-GEKLTDEE----V 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF TA
Sbjct: 122 DEXIREADIDGDGQVNYEEFVQXXTA 147
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V + + G N +A+LQ +++ D D +G IN
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSL-GCNPTEAELQDXINE----VDADGNGTIN 64
Query: 175 FEEF 178
F EF
Sbjct: 65 FPEF 68
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E +L+ AFR++D D +GFIS EL V+ NL + + V
Sbjct: 64 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 118
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF V A
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVMMA 144
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 61
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 62 FPEFLNL 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ ++ D E ++R AFR++D D +G+IS EL V + G L D + V
Sbjct: 68 EFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL-GEKLTDEE----V 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF TA
Sbjct: 123 DQXIREADIDGDGQVNYEEFVQXXTA 148
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V + + G N +A+LQ +++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAELQDXINE----VDADGNGTID 65
Query: 175 FEEFCS 180
F EF +
Sbjct: 66 FPEFLT 71
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ ++ D E ++R AFR++D D +G+IS EL V + G L D + V
Sbjct: 67 EFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL-GEKLTDEE----V 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG++N+EEF TA
Sbjct: 122 DEXIREADIDGDGQVNYEEFVQXXTA 147
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V + + G N +A+LQ +++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAELQDXINE----VDADGNGTID 64
Query: 175 FEEFCS 180
F EF +
Sbjct: 65 FPEFLT 70
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L+ AFR++D D +GFIS EL V+ NL + + VD+ I AD D DG
Sbjct: 80 DSEEELKEAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDG 134
Query: 172 KINFEEFCSVSTA 184
++N+EEF V A
Sbjct: 135 QVNYEEFVQVMMA 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLNL 71
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +GFIS EL V+ NL + + V
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I +D D DG++N+EEF ++ T+
Sbjct: 123 DEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR+ D D +G+IS EL V+ + G L D + VD+ I AD D DG
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDG 80
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 81 QVNYEEFVQMMTA 93
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG++
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 55
Query: 174 NFEEFCSVSTA 184
N+EEF + TA
Sbjct: 56 NYEEFVQMMTA 66
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 119
Query: 159 DKTILFADKDEDGKINFEEFCSVST 183
D+ I AD D DG++N+EEF + T
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMT 144
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 62
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 63 FPEFLTM 69
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 66 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 120
Query: 159 DKTILFADKDEDGKINFEEFCSVST 183
D+ I AD D DG++N+EEF + T
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMMT 145
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 63
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 64 FPEFLTM 70
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E +L+ AFR++D D +GFIS EL V+ NL + + V
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEV 122
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I AD D DG+IN++EF V A
Sbjct: 123 DEMIREADVDGDGQINYDEFVKVMMA 148
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D+ S+ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNG 62
Query: 172 KINFEEFCSV 181
I+F EF ++
Sbjct: 63 TIDFPEFLNL 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E ++R AFR++D D +G+IS EL V+ NL + + V
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEV 121
Query: 159 DKTILFADKDEDGKINFEEFCSVSTA 184
D+ I A+ D DG++N+EEF + TA
Sbjct: 122 DEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS EL V+ NL + + VD+ I AD D DG
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 56
Query: 172 KINFEEFCSV 181
++N+EEF +
Sbjct: 57 QVNYEEFVQM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++D D +G+IS +L V+ NL + + VD+ I AD D DG
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 58
Query: 172 KINFEEFCSVSTA 184
++N+E+F + TA
Sbjct: 59 QVNYEDFVQMMTA 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L+ AF+++D D +G+IS EL V+ + +G L D +++Q++ + AD D DG
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKE----ADLDGDG 60
Query: 172 KINFEEFCSV 181
++N+EEF +
Sbjct: 61 QVNYEEFVKM 70
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNNLK----D 151
EFI +S + +G+ KL +AF++YD+DN+G IS E+ +++ MVG+ +K +
Sbjct: 84 EFICALS-VTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVS 182
++ V+K DK++DG++ EEFC S
Sbjct: 143 DTPEKRVNKIFNMMDKNKDGQLTLEEFCEGS 173
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L+ AF+++D D +G+IS EL V+ + +G L D +++Q++ + AD D DG
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKE----ADLDGDG 55
Query: 172 KINFEEFCSV 181
++N+EEF +
Sbjct: 56 QVNYEEFVKM 65
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ D E +L+ AF+++D D +G+IS EL V+ + +G L D +++Q++
Sbjct: 67 EFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMI 125
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
+ AD D DG++N+EEF +
Sbjct: 126 KE----ADLDGDGQVNYEEFVKM 144
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 118 RFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEE 177
+ AF ++D D DG I+ EL V++ + N + +LQ ++ + D D +G I F+E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEV----DADGNGTIEFDE 67
Query: 178 FCSVSTASI 186
F S+ +
Sbjct: 68 FLSLMAKKV 76
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++R AFR++D D +G+IS EL V+ NL + + VD+ I A+ D DG++N
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREANIDGDGQVN 132
Query: 175 FEEFCSVSTA 184
+EEF + TA
Sbjct: 133 YEEFVQMMTA 142
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 60
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 61 FPEFLTM 67
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG----NNLKDAQL 154
+F+ +S FS + K +AFRI+D D+DG ++ +L +++ + G L +++
Sbjct: 82 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 141
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSVSTAS 185
+Q++D + +D D DG IN EF V + S
Sbjct: 142 KQLIDNILEESDIDRDGTINLSEFQHVISRS 172
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNN---LKDAQL 154
EF++ + F K++FAF++YD+ GFI EL +++ ++ + L + +
Sbjct: 94 GEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMI 153
Query: 155 QQIVDKTILFADKDEDGKINFEE---FCSVSTASIITM 189
+ +VDK + AD+ DGKI+ +E F S++ + I M
Sbjct: 154 EVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNM 191
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG----NNLKDAQL 154
+F+ +S FS + K +AFRI+D D+DG ++ +L +++ + G L +++
Sbjct: 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 172
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSVSTAS 185
+Q++D + +D D DG IN EF V + S
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHVISRS 203
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNN---LKDAQLQ 155
EF++ + F K++FAF++YD+ GFI EL +++ ++ + L + ++
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE 154
Query: 156 QIVDKTILFADKDEDGKINFEE---FCSVSTASIITM 189
+VDK + AD+ DGKI+ +E F S++ + I M
Sbjct: 155 VMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNM 191
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR++ D +G+IS +L V+ NL + + VD+ I A D DG
Sbjct: 381 DSEEEIREAFRVFGKDGNGYISAAQLRHVM-----TNLGEKLTDEEVDEMIREAGIDGDG 435
Query: 172 KINFEEFCSVSTA 184
++N+E+F + TA
Sbjct: 436 QVNYEQFVQMMTA 448
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ +L V++ + G N +A+LQ ++++ D +G I+
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSL-GQNPTEAELQDMINE----VGADGNGTID 365
Query: 175 FEEFCSV 181
F +F ++
Sbjct: 366 FPQFLTM 372
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNNLK----D 151
EFI +S + +G E KL++AF +YD+D +G+IS E+ ++++ MV + +K +
Sbjct: 84 EFIIALS-VTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEF--CSVSTASIITMF 190
+ ++ +K D + DGK++ EEF + S SI+ +
Sbjct: 143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AF+I+D D DGFIS EL V+ + +G + D + +D+ I AD D DG
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVM-INLGEKVTDEE----IDEMIREADFDGDG 134
Query: 172 KINFEEF 178
IN+EEF
Sbjct: 135 MINYEEF 141
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF +D + G I+ EL +++ + G N +A+LQ ++ + A+ + +G++N
Sbjct: 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTL-GQNPTEAELQDLIAE----AENNNNGQLN 64
Query: 175 FEEFCSV 181
F EFC +
Sbjct: 65 FTEFCGI 71
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 28/144 (19%)
Query: 47 VRNEDEFIQGVSQFSVKGDKDIDPLSKPAHF-----PSIHNVDSTFIYYIILYQFVSEFI 101
V NE+ F + SQF +GD + AHF + HN +F +FI
Sbjct: 81 VVNEETFKEIYSQFFPQGDS-----TTYAHFLFNAFDTDHNGAVSF----------EDFI 125
Query: 102 QGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQL 154
+G+S ++G + KL +AF +YD++ DG+I+ E+ ++K M+G LK+
Sbjct: 126 KGLS-ILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAP 184
Query: 155 QQIVDKTILFADKDEDGKINFEEF 178
+Q V+ DK++DG + +EF
Sbjct: 185 RQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGEL-------FQVLKMMVGNNLKD 151
EFI +S S +G E KL +AF +YD+++DG+I+ E+ ++++ MV N +
Sbjct: 84 EFITVLSTTS-RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEF 178
A + V K DK+EDG I +EF
Sbjct: 143 ATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
+F++ QF G E F ++D DN+GFI E VL + L++ +
Sbjct: 47 DFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVL-----STTSRGTLEEKL 101
Query: 159 DKTILFADKDEDGKINFEEFCSVSTASIITM 189
D + DG I F+E ++ AS+ M
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTI-VASVYKM 131
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ + D E +L AF+++D D +G IS EL V+ + G L D + V
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDE----V 121
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
D+ I AD D DG IN+EEF +
Sbjct: 122 DEMIREADIDGDGHINYEEFVRM 144
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 64
Query: 175 FEEFCSV---------STASIITMFPTFN 194
F EF S+ S +I F F+
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFD 93
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EF+ +++ + D E +L AF+++D D +G IS EL V+ + G L D + V
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDE----V 121
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
D+ I AD D DG IN+EEF +
Sbjct: 122 DEMIREADIDGDGHINYEEFVRM 144
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEV----DADGNGTID 64
Query: 175 FEEFCSV---------STASIITMFPTFN 194
F EF S+ S +I F F+
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFD 93
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+Q ++ + D ++ AFR++D D G IS L +V K + G N+ D +LQ++
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKEL-GENMTDEELQEM 122
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+D+ AD+D DG++N EEF +
Sbjct: 123 IDE----ADRDGDGEVNEEEFFRI 142
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ ++R AF ++D D G I EL +V +G K +++ K I DKD G
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKEL-KVAMRALGFEPKKEEIK----KMIADIDKDGSG 59
Query: 172 KINFEEFCSVSTASI 186
I+FEEF + TA +
Sbjct: 60 TIDFEEFLQMMTAKM 74
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L AF+++D D +G IS EL V+ + G L D + VD+ I AD D DG
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDE----VDEMIREADIDGDG 59
Query: 172 KINFEEFCSV 181
IN+EEF +
Sbjct: 60 HINYEEFVRM 69
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 47 VRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQ 106
V NED F Q +QF GD S AH+ + D+T + FV+
Sbjct: 32 VVNEDTFKQIYAQFFPHGDA-----STYAHY-LFNAFDTTQTGSVKFEDFVTAL-----S 80
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQLQQIVD 159
++G KLR+ F +YD++ DG+I+ E+ ++K M+G LK+ +Q VD
Sbjct: 81 ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 140
Query: 160 KTILFADKDEDGKINFEEF 178
DK++DG + +EF
Sbjct: 141 VFFQKMDKNKDGIVTLDEF 159
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 81 HNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQV 140
H V + +Y I V + + D+ ++R AF+++D D +GFIS EL
Sbjct: 4 HPVTAALMYRGIYT--VPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTA 61
Query: 141 LKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
++ + G + +L+ I+ + D D DG+++FEEF ++
Sbjct: 62 MRSL-GYMPNEVELEVIIQRL----DMDGDGQVDFEEFVTL 97
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ AFR +D D DG I+ EL + + + G L Q+ +D I AD D+DG++N+E
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGL-GQPLP----QEELDAMIREADVDQDGRVNYE 62
Query: 177 EFCSV 181
EF +
Sbjct: 63 EFARM 67
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 47 VRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQ 106
V NE+ F Q +QF GD S AH+ + D+T + FV+
Sbjct: 68 VVNEETFKQIYAQFFPHGDA-----STYAHY-LFNAFDTTQTGSVKFEDFVTAL-----S 116
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQLQQIVD 159
++G KLR+ F +YD++ DG+I+ E+ ++K M+G LK+ +Q VD
Sbjct: 117 ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 176
Query: 160 KTILFADKDEDGKINFEEF 178
DK++DG + +EF
Sbjct: 177 VFFQKMDKNKDGIVTLDEF 195
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 47 VRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQ 106
V NE+ F Q +QF GD S AH+ + D+T + FV+
Sbjct: 35 VVNEETFKQIYAQFFPHGDA-----STYAHY-LFNAFDTTQTGSVKFEDFVTAL-----S 83
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQLQQIVD 159
++G KLR+ F +YD++ DG+I+ E+ ++K M+G LK+ +Q VD
Sbjct: 84 ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 143
Query: 160 KTILFADKDEDGKINFEEFCS 180
DK++DG + +EF
Sbjct: 144 VFFQKMDKNKDGIVTLDEFLE 164
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 47 VRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQ 106
V NED F Q +QF GD S AH+ + D+T + FV+
Sbjct: 32 VVNEDTFKQIYAQFFPHGDA-----STYAHY-LFNAFDTTQTGSVKFEDFVTAL-----S 80
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQLQQIVD 159
++G KLR+ F +YD++ DG+I+ E+ ++K M+G L + +Q VD
Sbjct: 81 ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVD 140
Query: 160 KTILFADKDEDGKINFEEF 178
DK++DG + +EF
Sbjct: 141 VFFQKMDKNKDGIVTLDEF 159
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGN---NLKDAQLQQIVDKTILFADKDEDGKINFE 176
AFR++D+DNDG I+ EL VL GN N+ + + Q V K I DK+ DGKI+F
Sbjct: 130 AFRVFDVDNDGEITTAELAHVL--FNGNKRGNITERDVNQ-VKKMIREVDKNGDGKIDFY 186
Query: 177 EFCSV 181
EF +
Sbjct: 187 EFSEM 191
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEF+ +S+ D E +L AF+++D + DG IS EL VL +G L DA++ +
Sbjct: 67 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDM 125
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + D G+IN ++F ++
Sbjct: 126 LREV-----SDGSGEINIQQFAAL 144
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D DN+G IS+ EL V++ + G + +A++ ++++ D D + +I
Sbjct: 11 AEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEI----DVDGNHQIE 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FSEFLAL 72
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+ S K KE L+ AF+++D D G IS L +V K + G NL D +LQ+++D+
Sbjct: 11 TQKMSEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDE--- 65
Query: 164 FADKDEDGKINFEEFCSV 181
AD+D DG+++ +EF +
Sbjct: 66 -ADRDGDGEVSEQEFLRI 82
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DGFI EL +
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIFDKNADGFIDIEELGE 120
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+L+ G ++ + ++ ++ + DK+ DG+I+F+EF +
Sbjct: 121 ILR-ATGEHVTEEDIEDLMKDS----DKNNDGRIDFDEFLKM 157
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DG+I EL +
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDAEELAE 117
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ + G ++ D +++ ++ DK+ DG+I+F+EF +
Sbjct: 118 IFR-ASGEHVTDEEIESLMKD----GDKNNDGRIDFDEFLKM 154
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G +L I+++ D+D G I+
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIEEV----DEDGSGTID 71
Query: 175 FEEF 178
FEEF
Sbjct: 72 FEEF 75
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+ S K KE L+ AF+++D D G IS L +V K + G NL D +LQ+++D+
Sbjct: 1 TQKMSEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDE--- 55
Query: 164 FADKDEDGKINFEEFCSV 181
AD+D DG+++ +EF +
Sbjct: 56 -ADRDGDGEVSEQEFLRI 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D DG I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGDGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEF+ +S+ D E +L AF+++D + DG IS EL VL +G L DA++ +
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDM 124
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + D G+IN ++F ++
Sbjct: 125 LREV-----SDGSGEINIQQFAAL 143
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D DN+G IS+ EL V++ + G + +A++ ++++ D D + +I
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEI----DVDGNHQIE 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FSEFLAL 71
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+LR AFR +D + DG IS EL + ++ ++G+ + +++I+ L DG+++F
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNG----DGRVDF 63
Query: 176 EEFCSV 181
EEF +
Sbjct: 64 EEFVRM 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+ S K KE L+ AF+++D D G IS L +V K + G NL D +LQ+++D+
Sbjct: 69 TQKMSEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDE--- 123
Query: 164 FADKDEDGKINFEEFCSV 181
AD+D DG+++ +EF +
Sbjct: 124 -ADRDGDGEVSEQEFLRI 140
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ ++R AF ++D D G I EL +V +G K ++++++ + DK+ G
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEI----DKEGTG 57
Query: 172 KINFEEFCSVSTASI 186
K+NF +F +V T +
Sbjct: 58 KMNFGDFLTVMTQKM 72
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DGFI EL +
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+L+ G ++ + ++ ++ + DK+ DG+I+F+EF +
Sbjct: 121 ILR-ATGEHVTEEDIEDLMKDS----DKNNDGRIDFDEFLKM 157
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEF+ +S+ D E +L AF+++D + DG IS EL VL +G L DA++ ++
Sbjct: 67 SEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDEM 125
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + D G+IN ++F ++
Sbjct: 126 LREV-----SDGSGEINIKQFAAL 144
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D DN G IS EL V++ + G + +A++ ++++ D D + I
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSL-GLSPSEAEVADLMNEI----DVDGNHAIE 65
Query: 175 FEEF---------CSVSTASIITMFPTFN 194
F EF C+ S ++ F F+
Sbjct: 66 FSEFLALMSRQLKCNDSEQELLEAFKVFD 94
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 99 EFIQGVSQFSV--KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQ 156
+F++ V+ S+ KG + KLR+ F++YD+D +G I GEL ++K + N + +
Sbjct: 70 DFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTA 129
Query: 157 IVDKTILF--ADKDEDGKINFEEF 178
++F D + DG+++ EEF
Sbjct: 130 EEFTNMVFDKIDINGDGELSLEEF 153
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DGFI EL +
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELADCFRIFDKNADGFIDIEELGE 120
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+L+ G ++ + ++ ++ + DK+ DG+I+F+EF +
Sbjct: 121 ILR-ATGEHVTEEDIEDLMKDS----DKNNDGRIDFDEFLKM 157
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DGFI EL +
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGE 117
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+L+ G ++ + ++ ++ + DK+ DG+I+F+EF +
Sbjct: 118 ILR-ATGEHVTEEDIEDLMKDS----DKNNDGRIDFDEFLKM 154
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 71
Query: 175 FEEF 178
FEEF
Sbjct: 72 FEEF 75
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+LR AFR +D + DG IS EL + ++ ++G+ + +++I+ L DG+++F
Sbjct: 89 ELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNG----DGRVDF 144
Query: 176 EEFCSVST 183
EEF + +
Sbjct: 145 EEFVRMMS 152
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM 144
S++ ++ +LR AFR +D D DG+I+ +L ++ M
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM 40
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DG+I EL +
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAELFRIFDRNADGYIDAEELAE 117
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ + G ++ D +++ ++ DK+ DG+I+F+EF +
Sbjct: 118 IFR-ASGEHVTDEEIESLMKD----GDKNNDGRIDFDEFLKM 154
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G +L I+++ D+D G I+
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIEEV----DEDGSGTID 71
Query: 175 FEEFC 179
FEEF
Sbjct: 72 FEEFL 76
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+LR AFR +D + DG IS EL + ++ ++G+ + +++I+ L DG+++
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNG----DGRVD 143
Query: 175 FEEFCSVST 183
FEEF + +
Sbjct: 144 FEEFVRMMS 152
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM 144
S++ ++ +LR AFR +D D DG+I+ +L ++ M
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM 40
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+LR AFR +D + DG IS EL + ++ ++G+ + +++I+ L DG+++
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNG----DGRVD 157
Query: 175 FEEF 178
FEEF
Sbjct: 158 FEEF 161
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM 144
S++ ++ +LR AFR +D D DG+I+ +L ++ M
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM 54
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I VD I +F+ ++ + + KG E +L FRI+D + DGFI EL +
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+L+ G ++ +++ ++ + +DK+ DG+I+F+EF +
Sbjct: 121 ILR-ATGEHV----IEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF +YD D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSL-GLNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI--VDKTILFADKDEDGKINFEE 177
AFR++D+DNDG I+ EL +L GN + + + V + I DK+ DGKI+F E
Sbjct: 127 AFRVFDVDNDGEITTAELAHIL--YNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHE 184
Query: 178 FCSV 181
F +
Sbjct: 185 FSEM 188
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 76 HFPSIHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNG 135
+F IH V F Y +L +F + ++Q S D E KL+ F + D D G+I+
Sbjct: 15 YFQGIH-VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVE-KLKSTFLVLDEDGKGYITKE 72
Query: 136 ELFQVLKMMVGNNLK-----DAQLQQIVDKTILFADKDEDGKINFEEFCSVS 182
+L + L+ + LK D L QI D D GKI++ EF + +
Sbjct: 73 QLKKGLEK---DGLKLPYNFDLLLDQI--------DSDGSGKIDYTEFIAAA 113
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKDAQLQQIVDKTIL 163
G KL++AF +YD++ DG+I+ E+ ++K M+G + L++ + V++
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 164 FADKDEDGKINFEEF 178
D+++DG + EEF
Sbjct: 65 KMDRNQDGVVTIEEF 79
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNNL-----K 150
+F+ G+S ++G KL++AF +YD++ DG I+ E+ ++K M+G + +
Sbjct: 150 DFVVGLS-ILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILRE 208
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEF 178
DA L+ V++ D+++DG + +EF
Sbjct: 209 DAPLEH-VERFFQKMDRNQDGVVTIDEF 235
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+ S K KE L+ AF+++D D G IS L +V K + G NL D +LQ+ +D+
Sbjct: 94 TQKXSEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEXIDE--- 148
Query: 164 FADKDEDGKINFEEFCSV 181
AD+D DG+++ +EF +
Sbjct: 149 -ADRDGDGEVSEQEFLRI 165
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA-DKDEDGKINFEEFC 179
F I D D DGFI EL +LK ++ +D ++ KT++ A DKD DGKI EEF
Sbjct: 47 FHILDKDKDGFIDEDELGSILKGF-SSDARDLSAKET--KTLMAAGDKDGDGKIGVEEFS 103
Query: 180 SVSTAS 185
++ S
Sbjct: 104 TLVAES 109
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 65
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 66 FPEFLTM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
S+ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLNL 71
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADK 167
KG E +L FRI+D + DGFI EL ++L+ G ++ +++ ++ + +DK
Sbjct: 3 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHV----IEEDIEDLMKDSDK 57
Query: 168 DEDGKINFEEF 178
+ DG+I+F+EF
Sbjct: 58 NNDGRIDFDEF 68
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMV--GNNLKDAQLQQIVDKTILFA 165
+KG +++++ F I D D GFI EL VLK G +L D + + + +
Sbjct: 34 GLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKAL----LAAG 89
Query: 166 DKDEDGKINFEEFCSV 181
D D DGKI +EF +
Sbjct: 90 DSDHDGKIGADEFAKM 105
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 109 VKGDKESKLRFAFRIYDMDNDGFISNGELFQV------LKMMVGNNLKDAQL------QQ 156
++G E KL++ F+IYD D +G I EL + LK ++ Q ++
Sbjct: 89 LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148
Query: 157 IVDKTILFADKDEDGKINFEEF 178
+VD+ L D++ DG+++ EF
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEF 170
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTID 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FPEFLTM 71
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
SEF+ +S+ D E +L AF+++D + DG IS EL VL +G L DA+L+
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAELE 122
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D DN+G IS+ EL V++ + G + +A++ ++++ D D + +I
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEI----DVDGNHQIE 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FSEFLAL 71
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA-DKDEDGKINFEEFC 179
F I D D GFI EL +LK G + A L KT++ A DKD DGKI EEF
Sbjct: 47 FHILDKDKSGFIEEDELGSILK---GFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 180 SV 181
++
Sbjct: 104 TL 105
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
AFR++D DN G I+ +L +V K + G NL + +LQ++ I AD+++D +I+ +EF
Sbjct: 106 AFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRNDDNEIDEDEFI 160
Query: 180 SV 181
+
Sbjct: 161 RI 162
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 102 QGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKT 161
Q + + +++ ++R AF ++D D G I EL +V +G K ++++++ +
Sbjct: 15 QKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKEL-KVAMRALGFEPKKEEIKKMISEI 73
Query: 162 ILFADKDEDGKINFEEFCSVSTASI 186
DKD G I+FEEF ++ TA +
Sbjct: 74 ----DKDGSGTIDFEEFLTMMTAKM 94
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
+ +LR AFR+YD + +G+IS + ++L + L L ++D+ D D G +
Sbjct: 90 QQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEI----DADGSGTV 144
Query: 174 NFEEFCSVSTAS 185
+FEEF V T
Sbjct: 145 DFEEFMGVMTGG 156
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 111 GDKESKLRF--AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
G+++S+ AFR++D DN G I+ +L +V K + G NL + +LQ++ I AD++
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRN 57
Query: 169 EDGKINFEEFCSV 181
+D +I+ +EF +
Sbjct: 58 DDNEIDEDEFIRI 70
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
+ +LR AFR+YD + +G+IS + ++L + L L ++D+ D D G +
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEI----DADGSGTV 56
Query: 174 NFEEFCSVSTAS 185
+FEEF V T
Sbjct: 57 DFEEFMGVMTGG 68
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 63
Query: 175 FEEF 178
FEEF
Sbjct: 64 FEEF 67
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA-DKDEDGKINFEEFC 179
F I D D GFI EL +LK ++ +D ++ KT++ A DKD DGKI EEF
Sbjct: 47 FHILDKDKSGFIEEDELGSILKGF-SSDARDLSAKET--KTLMAAGDKDGDGKIGVEEFS 103
Query: 180 SV 181
++
Sbjct: 104 TL 105
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA-DKDEDGKINFEEFC 179
F I D D GFI EL +LK ++ +D ++ KT++ A DKD DGKI EEF
Sbjct: 11 FHILDKDKSGFIEEDELGSILKGFS-SDARDLSAKET--KTLMAAGDKDGDGKIGVEEFS 67
Query: 180 SVSTAS 185
++ S
Sbjct: 68 TLVAES 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS EL V++M+ G N +L D I D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKCEL----DAIICEVDEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D ++ +I++ T L +D +G + +EEF
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGL-GERLSDEEVDEIINLTDL--QEDLEGNVKYEEF 144
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D ++ +I++ T L +D +G + +EEF
Sbjct: 90 AFKTFDREGQGFISGAELRHVLSGL-GERLSDEEVDEIINLTDL--QEDLEGNVKYEEF 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D ++ +I++ T L +D +G + +EEF
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGL-GERLSDEEVDEIINLTDL--QEDLEGNVKYEEF 144
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEFI ++ +E ++ AF+++D D G IS ELF++ ++++ +L+ I
Sbjct: 401 SEFIASAIDRTILLSRE-RMERAFKMFDKDGSGKISTKELFKLFS-QADSSIQMEELESI 458
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+++ D ++DG+++F EF +
Sbjct: 459 IEQ----VDNNKDGEVDFNEFVEM 478
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMV--GNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
F+ D D GFI EL VLK G +L DA+ + + ADKD DGKI +EF
Sbjct: 48 FKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF----LKAADKDGDGKIGIDEF 103
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 109 VKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
+K D +++ AF+++D D+ G IS L +V K + G L D +L+ ++++ D D
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL-GETLTDEELRAMIEEF----DLD 144
Query: 169 EDGKINFEEFCSVSTAS 185
DG+IN EF ++ T S
Sbjct: 145 GDGEINENEFIAICTDS 161
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDK 160
AF ++DM+NDGF+ EL +K + G L ++ ++D+
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMKAL-GFELPKREILDLIDE 67
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D D G IS L V++M+ G N +L I+++ D+D G I+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRML-GQNPTKEELDAIIEEV----DEDGSGTID 74
Query: 175 FEEF 178
FEEF
Sbjct: 75 FEEF 78
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA-DKDEDGKINFEEFC 179
F I D D GFI EL +LK ++ +D ++ KT++ A DKD GKI EEF
Sbjct: 47 FHILDKDKSGFIEEDELGSILKGF-SSDARDLSAKET--KTLMAAGDKDGSGKIEVEEFS 103
Query: 180 SV 181
++
Sbjct: 104 TL 105
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ ++R AF ++D D G I EL +V +G K ++++++ + DKD G
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKEL-KVAMRALGFEPKKEEIKKMISEI----DKDGSG 81
Query: 172 KINFEEFCSVSTASI 186
I+FEEF ++ TA +
Sbjct: 82 TIDFEEFLTMMTAKM 96
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 80 IHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQ 139
I ++ST + + QF+ + + + F + GD E ++ F+++D D G I GEL
Sbjct: 43 ITEIESTLPAEVDMEQFL-QVLNRPNGFDMPGDPEEFVK-GFQVFDKDATGMIGVGELRY 100
Query: 140 VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTAS 185
VL + G L + ++ +++ + +DG +N+ +F + A+
Sbjct: 101 VLTSL-GEKLSNEEMDELLKGVPV-----KDGMVNYHDFVQMILAN 140
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 109 VKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
+K D +++ AF+++D D+ G IS L +V K + G L D +L+ +++ D D
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL-GETLTDEELRAXIEEF----DLD 144
Query: 169 EDGKINFEEFCSVSTAS 185
DG+IN EF ++ T S
Sbjct: 145 GDGEINENEFIAICTDS 161
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVL 141
EF+ +++ D E ++R AFR++D D +G+IS EL V+
Sbjct: 22 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEF 178
G ++F+EF
Sbjct: 70 GTVDFDEF 77
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 144
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 144
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 142
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 141
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKSEEELSDLFRMWDKNADGYIDLDEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEFCS 180
DG+I+++EF
Sbjct: 145 DGRIDYDEFLE 155
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 144
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+ +D + GFIS EL VL + G L D + +I+ T L +D +G + +E+F
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDEIIKLTDL--QEDLEGNVKYEDF 141
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGEL------FQVLKMMVGNNLKDAQLQQIVDKTILFADK 167
+++L AF+ D + DG+++ EL K + + +K+A K I ADK
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASA-----KLIKMADK 60
Query: 168 DEDGKINFEEF 178
+ DGKI+ EEF
Sbjct: 61 NSDGKISKEEF 71
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
KL AF+ +D D +G IS EL V + ++L+ ++++ D + DG ++F
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGI----DSNNDGDVDF 479
Query: 176 EEFCSV 181
EEFC +
Sbjct: 480 EEFCKM 485
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+L AFR++D DN G IS+ EL + G + D++ + V + DK+ DG+++F
Sbjct: 419 RLERAFRMFDSDNSGKISSTELATIF----GVSDVDSETWKSVLSEV---DKNNDGEVDF 471
Query: 176 EEF 178
+EF
Sbjct: 472 DEF 474
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL------QQIVDKTILFA 165
D+ +L F D + DG + EL + K ++ +DA + + VD+ +
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 166 DKDEDGKINFEEFCSVS 182
D D++G I + EF +V+
Sbjct: 392 DFDKNGYIEYSEFVTVA 408
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+L AFR++D DN G IS+ EL + G + D++ + V + DK+ DG+++F
Sbjct: 442 RLERAFRMFDSDNSGKISSTELATIF----GVSDVDSETWKSVLSEV---DKNNDGEVDF 494
Query: 176 EEF 178
+EF
Sbjct: 495 DEF 497
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL------QQIVDKTILFA 165
D+ +L F D + DG + EL + K ++ +DA + + VD+ +
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 166 DKDEDGKINFEEFCSVS 182
D D++G I + EF +V+
Sbjct: 415 DFDKNGYIEYSEFVTVA 431
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+L AFR++D DN G IS+ EL + G + D++ + V + DK+ DG+++F
Sbjct: 443 RLERAFRMFDSDNSGKISSTELATIF----GVSDVDSETWKSVLSEV---DKNNDGEVDF 495
Query: 176 EEF 178
+EF
Sbjct: 496 DEF 498
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL------QQIVDKTILFA 165
D+ +L F D + DG + EL + K ++ +DA + + VD+ +
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 166 DKDEDGKINFEEFCSVS 182
D D++G I + EF +V+
Sbjct: 416 DFDKNGYIEYSEFVTVA 432
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
AFR D + +G I EL Q+L + +G+ L +++++++ + + D G IN+E F
Sbjct: 81 AFRALDKEGNGTIQEAELRQLL-LNLGDALTSSEVEELMKEVSVSGD----GAINYESFV 135
Query: 180 SVSTASIITMFP 191
+ ++T +P
Sbjct: 136 DM----LVTGYP 143
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 13/63 (20%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ F+I+D DNDG +S EL L+ + G N +A+L I G++N
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSL-GKNPTNAELNTI------------KGQLNA 52
Query: 176 EEF 178
+EF
Sbjct: 53 KEF 55
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 100 FIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVD 159
+Q V++ +G E L FR++D + +G + EL VL + G + + +++
Sbjct: 73 MLQAVAKNRGQGTYEDYLE-GFRVFDKEGNGKVMGAELRHVLTTL-GEKMTEEEVE---- 126
Query: 160 KTILFADKDEDGKINFEEF 178
T+L +D +G IN+E F
Sbjct: 127 -TVLAGHEDSNGCINYEAF 144
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
V++++V K R F +D G ++ Q +++ ++L AQL I +
Sbjct: 3 VAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGP---QARTILMQSSLPQAQLASIWN---- 55
Query: 164 FADKDEDGKINFEEF 178
+D D+DGK+ EEF
Sbjct: 56 LSDIDQDGKLTAEEF 70
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKSEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEFCS 180
DG+I+++EF
Sbjct: 145 DGRIDYDEFLE 155
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 109 VKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
+KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKN 55
Query: 169 EDGKINFEEFCS 180
DG+I+++EF
Sbjct: 56 NDGRIDYDEFLE 67
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKTEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEFCS 180
DG+I+++EF
Sbjct: 145 DGRIDYDEFLE 155
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKTEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEF 178
DG+I+++EF
Sbjct: 145 DGRIDYDEF 153
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
KL AF+ +D D +G IS EL V + ++L+ ++++ D + DG ++F
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGI----DSNNDGDVDF 196
Query: 176 EEFCSV 181
EEFC +
Sbjct: 197 EEFCKM 202
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 95 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 154
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 155 WGFFGKKDDDKLTEKEFIEGTLAN 178
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 95 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 154
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 155 WGFFGKKDDDKLTEKEFIEGTLAN 178
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 95 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 154
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 155 WGFFGKKDDDKLTEKEFIEGTLAN 178
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 95 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 154
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 155 WGFFGKKDDDKLTEKEFIEGTLAN 178
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 95 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 154
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 155 WGFFGKKDDDKLTEKEFIEGTLAN 178
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKT 161
G KL +AF +YD+D +G IS E+ +++ KM+ + K + ++ +K
Sbjct: 96 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKI 155
Query: 162 ILFADKDEDGKINFEEFCSVSTAS 185
F K +D K+ +EF + A+
Sbjct: 156 WGFFGKKDDDKLTEKEFIEGTLAN 179
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNN 64
Query: 170 DGKINFEEF 178
DG+I+++EF
Sbjct: 65 DGRIDYDEF 73
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+L AFR +D DN G IS+ EL + G + D++ + V + DK+ DG+++F
Sbjct: 419 RLERAFRXFDSDNSGKISSTELATIF----GVSDVDSETWKSVLSEV---DKNNDGEVDF 471
Query: 176 EEF 178
+EF
Sbjct: 472 DEF 474
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ------LQQIVDKTILFA 165
D+ +L F D + DG + EL + K + +DA ++ VD+ +
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 166 DKDEDGKINFEEFCSVS 182
D D++G I + EF +V+
Sbjct: 392 DFDKNGYIEYSEFVTVA 408
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+L AF+ +D D G I+N EL ++ + + D Q++ + DK+ DG+++F
Sbjct: 398 RLLAAFQQFDSDGSGKITNEELGRLFGV---TEVDDETWHQVLQE----CDKNNDGEVDF 450
Query: 176 EEF 178
EEF
Sbjct: 451 EEF 453
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ F++ D DN G I+ EL LK VG+ L +++++ ++D AD D+ G I++
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDA----ADIDKSGTIDYG 79
Query: 177 EFCSVS 182
EF + +
Sbjct: 80 EFIAAT 85
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+S GEL Q+L + N +K+ + + ++D+ D ++D +++F+EF S+
Sbjct: 27 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISL 76
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D+ S+ + AF ++D + GFI+ L VLK G ++ A ++ ++ AD +G
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQF-GVRVEPAAFNEMFNE----ADATGNG 57
Query: 172 KINFEEFCSV 181
KI F EF S+
Sbjct: 58 KIQFPEFLSM 67
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 73 KPAHFPSIHN-VDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGF 131
+PA F + N D+T I +F+S + + Q + E LR AFR +D + G+
Sbjct: 40 EPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTT----SEDILRQAFRTFDPEGTGY 95
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
I L L + +G+ LK + + + T + E G+I ++ F +
Sbjct: 96 IPKAALQDAL-LNLGDRLKPHEFAEFLGIT-----ETEKGQIRYDNFINT 139
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKSEEELSDLFRMFDKNADGYIDLDEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEFCS 180
DG+I+++E+
Sbjct: 145 DGRIDYDEWLE 155
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+S GEL Q+L + N +K+ + + ++D+ D ++D +++F+EF S+
Sbjct: 31 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISL 80
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNN 59
Query: 170 DGKINFEEFCS 180
DG+I+++EF
Sbjct: 60 DGRIDYDEFLE 70
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 118 RFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEE 177
+ AF ++D D DG I+ EL V++ + N + +LQ ++ + D D +G I F+E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEV----DADGNGTIEFDE 67
Query: 178 FCSV 181
F S+
Sbjct: 68 FLSL 71
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR+ D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKSEEELSDLFRMXDKNADGYIDLDEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEEFCS 180
DG+I+++EF
Sbjct: 145 DGRIDYDEFLE 155
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++++ + AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEV----DEDGS 69
Query: 171 GKINFEEFCSVSTASI 186
G ++F+EF + S+
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
KG E +L FR++D + DG+I EL +++ G + + +++++ DK+
Sbjct: 90 KGKSEEELSDLFRMFDKNADGYIDLDEL-KIMLQATGETITEDDIEELMKD----GDKNN 144
Query: 170 DGKINFEE 177
DG+I+++E
Sbjct: 145 DGRIDYDE 152
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVL-KMMVGNNLKDAQLQQIVDKTIL-FADKDEDGK 172
S+L+ FRI D D GFI EL L + G + L KT L AD D DGK
Sbjct: 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARV----LTASETKTFLAAADHDGDGK 96
Query: 173 INFEEF 178
I EEF
Sbjct: 97 IGAEEF 102
>pdb|2WCE|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCE|B Chain B, Calcium-Free (Apo) S100a12
Length = 95
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
+S GEL Q+L + N +K+ + + ++D+ D ++D +++F+EF S
Sbjct: 31 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 79
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 118 RFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEE 177
+ AF ++D D DG I+ EL V++ + N + +LQ ++ + D D +G I F+E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEV----DADGNGTIEFDE 67
Query: 178 FCSV 181
F S+
Sbjct: 68 FLSL 71
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 67 DIDPLSKPAH-FPSI-HNVDST--FIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFR 122
D DP + H F S N+D T F Y+I + G KL +AF
Sbjct: 66 DTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTT-----------AGKTNQKLEWAFS 114
Query: 123 IYDMDNDGFISNGELFQVL----KMMVGNNLK-----DAQLQQIVDKTILFADKDEDGKI 173
+YD+D +G IS E+ +++ K + ++K + ++ +K + K++D K+
Sbjct: 115 LYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKL 174
Query: 174 NFEEFCSVSTAS 185
+EF + A+
Sbjct: 175 TEKEFIEGTLAN 186
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
E +L+ AFR+ D + G I L +LK + G+ L + +++ ++ +T D D G +
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSL-GDELTEDEIENMIAET----DTDGSGTV 60
Query: 174 NFEEF 178
++EEF
Sbjct: 61 DYEEF 65
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
+++ + + AF+++D DND ++ EL V++ + N K Q + + + DKD
Sbjct: 10 AEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTK-----QKISEIVKDYDKDNS 64
Query: 171 GKINFEEFCSV 181
GK + E F ++
Sbjct: 65 GKFDQETFLTI 75
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
++E L AF +D D G+I+ EL Q + +++ +L + V D+D DG
Sbjct: 96 EREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXRDV-------DQDNDG 148
Query: 172 KINFEEFCSVSTASIIT 188
+I++ EF + IT
Sbjct: 149 RIDYNEFVAXXQKGSIT 165
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+L AF+ +D D G I+N EL ++ + + D Q++ + DK+ DG+++
Sbjct: 123 ERLLAAFQQFDSDGSGKITNEELGRLFGV---TEVDDETWHQVLQE----CDKNNDGEVD 175
Query: 175 FEEFCSV 181
FEEF +
Sbjct: 176 FEEFVEM 182
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQV-LKMMVGNNLKDAQLQQI 157
EFI V+ ++ E KL++ F++YD D +G I EL + + + N + ++
Sbjct: 78 EFIAAVN-LIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF 136
Query: 158 VDKTILFADKDEDGKINFEEFCS 180
++ D + DG++ EEF +
Sbjct: 137 INLVFHKIDINNDGELTLEEFIN 159
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ-LQQIVDKTILFA-DKDEDGKIN 174
++ AF I D D GFI E LK+ + N DA+ L KT L A D D DGKI
Sbjct: 44 VKKAFAIIDQDKSGFIEEDE----LKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 99
Query: 175 FEEFCSVSTA 184
+EF ++ A
Sbjct: 100 VDEFTALVKA 109
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ F++ D DN G I+ EL LK VG+ L +++++ ++D AD D+ G I++
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDA----ADIDKSGTIDYG 66
Query: 177 EFCSVS 182
EF + +
Sbjct: 67 EFIAAT 72
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EFI + K ++E L AF +D D G+I+ E+ Q KD L I
Sbjct: 66 GEFIAATVHLN-KLEREENLVSAFSYFDKDGSGYITLDEIQQA--------CKDFGLDDI 116
Query: 158 -VDKTILFADKDEDGKINFEEFCSV 181
+D I D+D DG+I++ EF ++
Sbjct: 117 HIDDMIKEIDQDNDGQIDYGEFAAM 141
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
G E +L FR++D + DG+I EL +++ G + + +++++ DK+ D
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDEL-KIMLQATGETITEDDIEELMKD----GDKNND 56
Query: 171 GKINFEEFCS 180
G+I+++EF
Sbjct: 57 GRIDYDEFLE 66
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ + AF ++D DN+G IS+ EL V++ + G + +A++ ++++ D D + +I
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEI----DVDGNHQIE 64
Query: 175 FEEFCSV 181
F EF ++
Sbjct: 65 FSEFLAL 71
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMV---GNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+R YD D+ GFI EL LK ++ + D +L + D + D + DGK+
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 177 EFCSV 181
E +
Sbjct: 168 EMARL 172
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
AF +YD D +G+I EL +LK + N ++ + I
Sbjct: 196 AFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNI 233
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 109 VKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
V+ D E ++ AF+++D + DG I E +++ + L DA++++ + + AD+D
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKE----ADED 57
Query: 169 EDGKINFEEFCSVSTAS 185
+G I+ EF + S
Sbjct: 58 GNGVIDIPEFMDLIKKS 74
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ-LQQIVDKTILFA-DKDEDGKIN 174
++ AF I D D GFI E LK+ + N DA+ L KT L A D D DGKI
Sbjct: 43 VKKAFAIIDQDKSGFIEEDE----LKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 175 FEEFCSVSTA 184
+E+ ++ A
Sbjct: 99 VDEWTALVKA 108
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
E +L FR++D + DG+I EL +++ G + + +++++ DK+ DG+I
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEEL-KIMLQATGETITEDDIEELMKD----GDKNNDGRI 58
Query: 174 NFEEFCS 180
+++EF
Sbjct: 59 DYDEFLE 65
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 80 FRTYDRDNSGMIDKNELKQALS-GAGYRLSD----QFHDILIRKFDRQGRGQIAFDDF 132
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
E +LR AF ++D D G I+ EL + + + ++ + + AD+++D I
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELANLFGLT-------SISEKTWNDVLGEADQNKDNMI 486
Query: 174 NFEEFCSV 181
+F+EF S+
Sbjct: 487 DFDEFVSM 494
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFAD--KDEDGKINFEE 177
AF+ +D + G IS+ E+ VLKM+ G + + Q I F D +D DG I +E+
Sbjct: 90 AFKTFDREGQGLISSAEIRNVLKML-GERITEDQCNDI----FTFCDIREDIDGNIKYED 144
Query: 178 F 178
Sbjct: 145 L 145
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ ++R AF ++D D G I EL +V +G K ++++++ + DK+ G
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEI----DKEGTG 82
Query: 172 KINFEEFCSVSTASI 186
K+NF +F +V T +
Sbjct: 83 KMNFGDFLTVMTQKM 97
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 98 FRTYDRDNSGMIDKNELKQALSGF-GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 150
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 99 FRTYDRDNSGMIDKNELKQALSGF-GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 151
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 77 FRTYDRDNSGMIDKNELKQALS---GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 127
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 121 FRIYDMDNDGFISNGELFQVLK---MMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEE 177
+R YD D+ G+IS EL LK + + +L + D DK++DG+++ +
Sbjct: 110 WRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLND 169
Query: 178 FCSV 181
+
Sbjct: 170 LARI 173
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 80 FRTYDRDNSGMIDKNELKQALSGF-GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 132
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEF 178
F + D D GFI EL +LK DA+ + +L A DKD DGKI +EF
Sbjct: 48 FHMLDKDKSGFIEEDELGFILKGFS----PDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
Query: 179 CSVSTAS 185
++ S
Sbjct: 104 STLVAES 110
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGF-GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 128
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
FR YD DN G I EL Q L G L D Q D I D+ G+I F++F
Sbjct: 77 FRTYDRDNSGMIDKNELKQALSGF-GYRLSD----QFHDILIRKFDRQGRGQIAFDDF 129
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS----VSTA 184
+ EL +++ + + L++ + Q++VDK + D+D DG+ +F+EF + V+TA
Sbjct: 27 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTA 83
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS----VSTA 184
+ EL +++ + + L++ + Q++VDK + D+D DG+ +F+EF + V+TA
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTA 84
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 29.6 bits (65), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ-LQQIVDKTILFA-DKDEDGKI 173
+++ F I D D GFI EL ++ + N A+ L K L A D D DGKI
Sbjct: 42 QIKKVFGILDQDKSGFIEEEEL----QLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKI 97
Query: 174 NFEEFCSVSTA 184
EEF S+ A
Sbjct: 98 GVEEFQSLVKA 108
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ-LQQIVDKTILFA-DKDEDGKI 173
+++ F I D D GFI EL ++ + N A+ L K L A D D DGKI
Sbjct: 43 QIKKVFGILDQDKSGFIEEEEL----QLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKI 98
Query: 174 NFEEFCSVSTA 184
EEF S+ A
Sbjct: 99 GVEEFQSLVKA 109
>pdb|2RHQ|A Chain A, Phers From Staphylococcus Haemolyticus- Rational Protein
Engineering And Inhibitor Studies
pdb|2RHS|A Chain A, Phers From Staphylococcus Haemolyticus- Rational Protein
Engineering And Inhibitor Studies
pdb|2RHS|C Chain C, Phers From Staphylococcus Haemolyticus- Rational Protein
Engineering And Inhibitor Studies
Length = 294
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 69 DPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDN 128
+ L+ P P+ DS +I IL + + +Q + G K+ ++Y D+
Sbjct: 87 EALNLPKSHPARDMQDSFYITDEILMRTHTSPVQARTMEKRNGQGPVKIICPGKVYRRDS 146
Query: 129 DGFISNGELFQVLKMMVGNNLKDAQLQ---QIVDKTILFADKD 168
D + + Q+ ++V N+K + L+ ++V K + AD++
Sbjct: 147 DDATHSHQFTQIEGLVVDKNIKMSDLKGTLELVAKKLFGADRE 189
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + A I T
Sbjct: 27 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF-VAMITTACH 85
Query: 192 TF 193
F
Sbjct: 86 EF 87
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + A I T
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF-VAMITTACH 86
Query: 192 TF 193
F
Sbjct: 87 EF 88
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + A I T
Sbjct: 27 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF-VAMITTACH 85
Query: 192 TF 193
F
Sbjct: 86 EF 87
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS----VSTA 184
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + V+TA
Sbjct: 27 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTA 83
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS----VSTA 184
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + V+TA
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTA 84
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
DK + R F+ +D + DG IS EL + LK + ++ +++ ++ + D D DG
Sbjct: 7 DKAERERI-FKRFDANGDGKISAAELGEALKTL--GSITPDEVKHMMAEI----DTDGDG 59
Query: 172 KINFEEFCSVSTAS 185
I+F+EF A+
Sbjct: 60 FISFQEFTDFGRAN 73
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + A I T
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF-VAMITTACH 86
Query: 192 TF 193
F
Sbjct: 87 EF 88
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS----VSTA 184
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + V+TA
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTA 84
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D D DG+ +F+EF + A I T
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAF-VAMITTACH 86
Query: 192 TF 193
F
Sbjct: 87 EF 88
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
F+ +D + DG IS+ EL LK + G+ D V + + D D DG I+F+EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTL-GSVTPDE-----VRRMMAEIDTDGDGFISFDEFTD 70
Query: 181 VSTAS 185
+ A+
Sbjct: 71 FARAN 75
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM 144
S++ ++ +LR AFR +D D DG+I+ +L ++ M
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM 39
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 103 GVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGN--NLKDAQLQQIVDK 160
G+S+ S S+++ FR D D G++ EL L+ + L +++ + ++D
Sbjct: 34 GLSKMSA-----SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDA 88
Query: 161 TILFADKDEDGKINFEEF 178
AD D DGKI +EF
Sbjct: 89 ----ADNDGDGKIGADEF 102
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+++D ++ G +S G+L +L + G L DA+ VD+ + + D +G+I++++F
Sbjct: 88 AFQVFDKESTGKVSVGDLRYMLTGL-GEKLTDAE----VDELLKGVEVDSNGEIDYKKF 141
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLK 142
E +L AFRI+D + DG+I EL ++L+
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILR 32
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 105 SQFSVKGDKESKLRFAFRIYDMDNDGFISNGEL---FQVLKMMVGNNLKDAQLQQIVDKT 161
++ + G ++ AF D D GFI EL QV K L DA+ + +
Sbjct: 32 AKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGA-RALTDAETKAFLKA- 89
Query: 162 ILFADKDEDGKINFEEFCSVSTA 184
D D DG I EE+ ++ A
Sbjct: 90 ---GDSDGDGAIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 105 SQFSVKGDKESKLRFAFRIYDMDNDGFISNGEL---FQVLKMMVGNNLKDAQLQQIVDKT 161
++ + G ++ AF D D GFI EL QV K L DA+ + +
Sbjct: 31 AKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGA-RALTDAETKAFLKA- 88
Query: 162 ILFADKDEDGKINFEEFCSVSTA 184
D D DG I EE+ ++ A
Sbjct: 89 ---GDSDGDGAIGVEEWVALVKA 108
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
AF+++D ++ G +S G+L +L + G L DA+ VD+ + + D +G+I++++F
Sbjct: 10 AFQVFDKESTGKVSVGDLRYMLTGL-GEKLTDAE----VDELLKGVEVDSNGEIDYKKF 63
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
IS ++L+ + + L D ++ DK I D + DG+I+F+E+ ++
Sbjct: 32 ISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTL 81
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ-LQQIVDKTILFA-DKDEDGKIN 174
++ AF I D GFI EL K+ + N DA+ L KT L A D D DGKI
Sbjct: 43 VKKAFAIIAQDKSGFIEEDEL----KLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 175 FEEFCSVSTA 184
+E+ ++ A
Sbjct: 99 VDEWTALVKA 108
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
IS ++L+ + + L D ++ DK I D + DG+I+F+E+ ++
Sbjct: 31 ISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTL 80
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
F+ +D + DG IS EL L+ + + + Q + + D D DG I+F EF S
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFIS 61
Query: 181 VSTAS 185
A+
Sbjct: 62 FCNAN 66
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
F+ +D + DG IS EL L+ + + + Q + + D D DG I+F EF S
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFIS 62
Query: 181 VSTAS 185
A+
Sbjct: 63 FCNAN 67
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ AF + D+D DGF+S E + + +G D +L ++ K+ G +NF
Sbjct: 19 EMKEAFSMIDVDRDGFVSK-EDIKAISEQLGRAPDDKELTAML--------KEAPGPLNF 69
Query: 176 EEFCSV 181
F S+
Sbjct: 70 TMFLSI 75
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ AF + D+D DGF+S E + + +G D +L ++ K+ G +NF
Sbjct: 7 EMKEAFSMIDVDRDGFVSK-EDIKAISEQLGRAPDDKELTAML--------KEAPGPLNF 57
Query: 176 EEFCSV 181
F S+
Sbjct: 58 TMFLSI 63
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
F+ +D+D +G IS EL ++ +++++ + + +D + D + DG+I+F EF
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGR---DDIENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ AF + D+D DGF+S E + + +G D +L ++ K+ G +NF
Sbjct: 8 EMKEAFSMIDVDRDGFVSK-EDIKAISEQLGRAPDDKELTAML--------KEAPGPLNF 58
Query: 176 EEFCSV 181
F S+
Sbjct: 59 TMFLSI 64
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 103 GVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGEL-FQVLKMMVGNNLKDAQLQQIVDKT 161
G+S+ S ++++ FR D D G++ EL F + K G +L + K+
Sbjct: 35 GLSKMSA-----NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGAR----ELTESETKS 85
Query: 162 ILFA-DKDEDGKINFEEF 178
++ A D D DGKI EEF
Sbjct: 86 LMAAADNDGDGKIGAEEF 103
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ AF + D+D DGF+S E + + +G D +L ++ K+ G +NF
Sbjct: 8 EMKEAFSMIDVDRDGFVSK-EDIKAISEQLGRAPDDKELTAML--------KEAPGPLNF 58
Query: 176 EEFCSV 181
F S+
Sbjct: 59 TMFLSI 64
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTASIITMFP 191
+ EL +++ + + L++ + Q++VDK + D + DG+ +F+EF + A I T
Sbjct: 28 LKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAF-VAMITTACH 86
Query: 192 TF 193
F
Sbjct: 87 EF 88
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D++ L+ +++ D D DG ++ E+ K +++VD+ I+ AD + DG
Sbjct: 72 DEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF--------GYEKVVDQ-IMKADANGDG 122
Query: 172 KINFEEFCS 180
I EEF +
Sbjct: 123 YITLEEFLA 131
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+++ AF + D+D DGF+S E + + +G D +L ++ K+ G +NF
Sbjct: 5 EMKEAFSMIDVDRDGFVSK-EDIKAISEQLGRAPDDKELTAML--------KEAPGPLNF 55
Query: 176 EEFCSV 181
F S+
Sbjct: 56 TMFLSI 61
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
++ AF + D D GFI EL L+ L DA+ + + DKD DG I
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF----LADGDKDGDGMIG 98
Query: 175 FEEFCSVSTA 184
+EF ++ A
Sbjct: 99 VDEFAAMIKA 108
>pdb|3N9T|A Chain A, Cryatal Structure Of Hydroxyquinol 1,2-Dioxygenase From
Pseudomonas Putida Dll-E4
Length = 290
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 49 NEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSE 99
++D ++ + F VKG + +PAH +D + Y Y+FV E
Sbjct: 238 SDDPYLDSDAVFGVKGSLQVKYEDRPAHDEDAGGLDMPYPYKSAYYEFVME 288
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGN--NLKDAQLQQIVDKTILFADKDEDGKIN 174
++ AF + D D GFI EL L++ L DA+ + + D D DG I
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKA----GDSDGDGAIG 99
Query: 175 FEEFCSVSTA 184
+E+ ++ A
Sbjct: 100 VDEWAALVKA 109
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 120 AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
AF + D + DG I +L + M N+K+ +L ++ K+ G INF F
Sbjct: 17 AFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMI--------KEASGPINFTVFL 68
Query: 180 SV 181
++
Sbjct: 69 TM 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.141 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,901,894
Number of Sequences: 62578
Number of extensions: 187548
Number of successful extensions: 1223
Number of sequences better than 100.0: 280
Number of HSP's better than 100.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 428
length of query: 195
length of database: 14,973,337
effective HSP length: 94
effective length of query: 101
effective length of database: 9,091,005
effective search space: 918191505
effective search space used: 918191505
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)