RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11002
(195 letters)
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 125 bits (315), Expect = 4e-37
Identities = 72/83 (86%), Positives = 78/83 (93%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
EFI+GVSQFSVKGDKE KLRFAFRIYDMD DG+ISNGELFQVLKMMVGNNLKD QLQQIV
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
DKTI+ ADKD DG+I+FEEFC+V
Sbjct: 119 DKTIINADKDGDGRISFEEFCAV 141
Score = 44.9 bits (107), Expect = 1e-06
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 112 DKESKLRF--AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
D + R F+ D+DN G +S E + ++ + +Q+++D D D
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ-----NPLVQRVIDI----FDTDG 51
Query: 170 DGKINFEEFCSV 181
+G+++F+EF
Sbjct: 52 NGEVDFKEFIEG 63
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 113 bits (284), Expect = 9e-32
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNN---LKDAQLQ 155
EF++ + F K++FAF++YD+ GFI EL +++ ++ + L + ++
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE 154
Query: 156 QIVDKTILFADKDEDGKINFEEFCSV 181
+VDK + AD+ DGKI+ +E+
Sbjct: 155 VMVDKAFVQADRKNDGKIDIDEWKDF 180
Score = 29.4 bits (66), Expect = 0.64
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
+ +DG I E L N ++ +I D D +G I F EF
Sbjct: 49 SIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFD----VFDVKRNGVIEFGEF 96
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 111 bits (279), Expect = 3e-31
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG----NNLKDAQL 154
+F+ +S FS + K +AFRI+D D+DG ++ +L +++ + G L +++
Sbjct: 82 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 141
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSVSTAS 185
+Q++D + +D D DG IN EF V + S
Sbjct: 142 KQLIDNILEESDIDRDGTINLSEFQHVISRS 172
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 111 bits (280), Expect = 3e-31
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 98 SEFIQGVSQF----------------SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVL 141
F++ ++ F + +KL +AF++YD+D DG IS E+ QVL
Sbjct: 81 PGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVL 140
Query: 142 KMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
++MVG + + QL+ I D+T+ AD+D DG ++F EF
Sbjct: 141 RLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKS 180
Score = 43.2 bits (102), Expect = 1e-05
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 11/83 (13%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
+ I+ + FS +L FR D + G++S +L Q+ + N ++ +
Sbjct: 15 DSIRRETGFSQA--SLLRLHHRFRALDRNKKGYLSRMDLQQIGAL--AVNPLGDRIIESF 70
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
D +++F F V
Sbjct: 71 FP-------DGSQRVDFPGFVRV 86
Score = 29.0 bits (65), Expect = 0.82
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 12/73 (16%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKT--------ILFA----DKD 168
+ D + +VL +D + Q + +A D D
Sbjct: 67 IESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLD 126
Query: 169 EDGKINFEEFCSV 181
DGKI+ E V
Sbjct: 127 RDGKISRHEMLQV 139
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 111 bits (278), Expect = 1e-30
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNNLKDAQLQ 155
EF + +S F + K+ F+F++YD+ GFI E+ Q++ G NLKD ++
Sbjct: 106 EFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 165
Query: 156 QIVDKTILFADKDEDGKINFEEFCSV 181
I+DKT AD DGKI+ EE+ S+
Sbjct: 166 DIIDKTFEEADTKHDGKIDKEEWRSL 191
Score = 29.4 bits (66), Expect = 0.52
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF 178
+ +DG I+ E L + + D+ D +G + FEEF
Sbjct: 60 AVIDDGLINKEEFQLALFKT------NKKESLFADRVFDLFDTKHNGILGFEEF 107
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 107 bits (268), Expect = 2e-29
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 99 EFIQGVSQFSVKGD---------------KESKLRFAFRIYDMDNDGFISNGELFQVLKM 143
F++ ++ F D + +KL FAFR+YD+D D IS EL QVL+M
Sbjct: 82 GFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRM 141
Query: 144 MVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV-STASIITMF 190
MVG N+ D QL I D+TI AD+D D I+F EF V +
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189
Score = 37.8 bits (88), Expect = 9e-04
Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 13/84 (15%)
Query: 99 EFIQGVSQFSVKGDKE-SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
E I+ + FS + ++L F D +G +S + ++ ++ N ++
Sbjct: 15 EEIKKETGFSHS---QITRLYSRFTSLDKGENGTLSREDFQRIPEL--AINPLGDRIINA 69
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + ++NF F
Sbjct: 70 FFS-------EGEDQVNFRGFMRT 86
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 106 bits (267), Expect = 3e-29
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG----NNLKDAQL 154
+F+ +S FS + K +AFRI+D D+DG ++ +L +++ + G L +++
Sbjct: 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 172
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSV 181
+Q++D + +D D DG IN EF V
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHV 199
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 99.9 bits (249), Expect = 1e-26
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK-MMVGNNLKDAQLQQI 157
EFI V+ + E KL++ F++YD D +G I EL + + N + ++
Sbjct: 78 EFIAAVNLIM-QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF 136
Query: 158 VDKTILFADKDEDGKINFEEFC 179
++ D + DG++ EEF
Sbjct: 137 INLVFHKIDINNDGELTLEEFI 158
Score = 37.1 bits (86), Expect = 0.002
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
G + E +L + N + + Q+ + D ++DG ++F EF +
Sbjct: 30 MEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYN----TFDTNKDGFVDFLEFIA 81
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 95.2 bits (237), Expect = 6e-25
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL--QQ 156
E++ +S KG + KLR+ F++YD+D +G I GEL ++K + N + + ++
Sbjct: 73 EYVAALSLVL-KGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEE 131
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
+ D + DG+++ EEF
Sbjct: 132 FTNMVFDKIDINGDGELSLEEFM 154
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 91.8 bits (228), Expect = 1e-23
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM------------VG 146
E++ ++ +G E KL++ F+IYD D +G I EL +++ +
Sbjct: 80 EYVAALNLVL-RGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAE 138
Query: 147 NNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
K +++VD+ L D++ DG+++ EF
Sbjct: 139 QQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
Score = 41.3 bits (97), Expect = 5e-05
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 9/82 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
E V +E +F + G + E + K+ N ++ +
Sbjct: 11 EENGAVGAADAAQLQEWYKKF----LEECPSGTLFMHEFKRFFKVP-DNEEATQYVEAMF 65
Query: 159 DKTILFADKDEDGKINFEEFCS 180
D + D I+F E+ +
Sbjct: 66 R----AFDTNGDNTIDFLEYVA 83
Score = 26.3 bits (58), Expect = 6.1
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 163 LFADKDEDGKINFEEFCSV 181
F ++ G + EF
Sbjct: 30 KFLEECPSGTLFMHEFKRF 48
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 88.1 bits (219), Expect = 2e-23
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGN-NLKDAQLQQIVDKTILFADKDEDGK 172
+++L AF+ D + DG+++ EL + + L ++++ K I ADK+ DGK
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 173 INFEEFCSV 181
I+ EEF +
Sbjct: 66 ISKEEFLNA 74
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 89.1 bits (221), Expect = 1e-22
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG-------NNLKD 151
EFIQ +S S +G + KLR+AF++YD+DNDG+I+ E+ ++ + ++
Sbjct: 84 EFIQALSVTS-RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMFPTFN 194
++ VD+ DK+ DGK+ +EF S A SI+ ++
Sbjct: 143 NTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 187
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 89.9 bits (223), Expect = 1e-22
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM-------MVGNNLKD 151
+FI+G+S +G + KL +AF +YD++ DG+I+ E+ ++K LK+
Sbjct: 123 DFIKGLSILL-RGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE 181
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFC 179
+Q V+ DK++DG + +EF
Sbjct: 182 DAPRQHVETFFQKMDKNKDGVVTIDEFI 209
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 89.3 bits (221), Expect = 2e-22
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM-------MVGNNLKD 151
+F+ +S +G KLR+ F +YD++ DG+I+ E+ ++K LK+
Sbjct: 110 DFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 168
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMFPTFN 194
+Q VD DK++DG + +EF +I+ F
Sbjct: 169 DTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQ 213
Score = 36.1 bits (83), Expect = 0.004
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
F Q +QF GD + + F +D G + + L +++ + + +
Sbjct: 73 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK-----L 127
Query: 159 DKTILFADKDEDGKINFEEFCSVSTASIITM 189
T D ++DG IN EE + A M
Sbjct: 128 RWTFNLYDINKDGYINKEEMMDIVKAIYDMM 158
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 86.8 bits (215), Expect = 7e-22
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM-------MVGNNLKD 151
+F+ +S +G KLR+ F +YD++ DG+I+ E+ ++K LK+
Sbjct: 77 DFVTALSILL-RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 135
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFC 179
+Q VD DK++DG + +EF
Sbjct: 136 DTPRQHVDVFFQKMDKNKDGIVTLDEFL 163
Score = 37.9 bits (88), Expect = 7e-04
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
F Q +QF GD + + F +D G + + L + L + + +
Sbjct: 40 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL-----SILLRGTVHEKL 94
Query: 159 DKTILFADKDEDGKINFEEFCSVSTASIITM 189
T D ++DG IN EE + A M
Sbjct: 95 RWTFNLYDINKDGYINKEEMMDIVKAIYDMM 125
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 88.6 bits (219), Expect = 7e-22
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM---MVGNN----LKD 151
+F+ G+S +G KL++AF +YD++ DG I+ E+ ++K M+G + L++
Sbjct: 150 DFVVGLSILL-RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILRE 208
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMFPTFN 194
+ V++ D+++DG + +EF +I+ F
Sbjct: 209 DAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFE 253
Score = 37.7 bits (87), Expect = 0.001
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
F SQF +GD + F F +D D +G I + L +++ + + +
Sbjct: 113 TFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEK-----L 167
Query: 159 DKTILFADKDEDGKINFEEFCSVSTASIITM 189
D ++DG I EE ++ + M
Sbjct: 168 KWAFNLYDINKDGCITKEEMLAIMKSIYDMM 198
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 86.8 bits (215), Expect = 9e-22
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM-------VGNNLKD 151
EFI +S S +G E KL +AF +YD+++DG+I+ E+ ++ + V N +
Sbjct: 84 EFITVLSTTS-RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMFPTFN 194
A + V K DK+EDG I +EF S SII ++
Sbjct: 143 ATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD 187
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 86.4 bits (214), Expect = 2e-21
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG-------NNLK 150
EFI +S S +G E KL++AF +YD+D +G+IS E+ ++++ +
Sbjct: 83 REFIIALSVTS-RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPED 141
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMF 190
++ ++ +K D + DGK++ EEF + + SI+ +
Sbjct: 142 ESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 85.6 bits (212), Expect = 2e-21
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM-------VGNNLKD 151
EFI +S S +G+ KL +AF++YD+DN+G IS E+ +++ + V +
Sbjct: 84 EFICALSVTS-RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDE 142
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFCSVSTA--SIITMFPTFN 194
++ V+K DK++DG++ EEFC S +I++ ++
Sbjct: 143 DTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSLYD 187
Score = 25.9 bits (57), Expect = 7.7
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 11/46 (23%)
Query: 147 NNLKDAQLQQIVDKTIL-----------FADKDEDGKINFEEFCSV 181
+ L QLQ +V T F G +N EF +
Sbjct: 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKI 51
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 76.1 bits (188), Expect = 1e-18
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK--MMVGNNLKDAQLQQ 156
F V KG +++++ F I D D GFI EL VLK G +L D + +
Sbjct: 28 RFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKA 84
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
+ + D D DGKI +EF
Sbjct: 85 L----LAAGDSDHDGKIGADEFA 103
Score = 27.9 bits (63), Expect = 0.82
Identities = 15/63 (23%), Positives = 19/63 (30%), Gaps = 15/63 (23%)
Query: 123 IYDMDNDGFISNGELFQ--VLKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEF 178
I + G F LK +K+ F DKD+ G I EE
Sbjct: 15 ISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEV-----------FEILDKDQSGFIEEEEL 63
Query: 179 CSV 181
V
Sbjct: 64 KGV 66
Score = 26.8 bits (60), Expect = 2.1
Identities = 4/35 (11%), Positives = 12/35 (34%), Gaps = 6/35 (17%)
Query: 149 LKDAQLQQIVDKTILFADKDEDGKINFEEFCSVST 183
LK + + + + G +++ F +
Sbjct: 6 LKADDINK------AISAFKDPGTFDYKRFFHLVG 34
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 75.8 bits (186), Expect = 5e-18
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 99 EFIQGVSQFSVKGDKESKLRF-AFRIYDMDNDGFISNGELFQVLKMM-------VGNNLK 150
E ++GV +L+ F+++D D + + EL + + +
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 110
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFCS 180
+ +L I+D + DK+ DG I++ EF
Sbjct: 111 EDELINIIDGVLRDDDKNNDGYIDYAEFAK 140
Score = 25.3 bits (55), Expect = 8.9
Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 46 VVRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVD-STFIYYIILYQFVSEFIQGV 104
V +++ ++ + K + ++ P H+ +H+ D + + + L ++ +
Sbjct: 42 TVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEE 101
Query: 105 SQFSVKGDKESKLRFA----FRIYDMDNDGFISNGELFQVLK 142
E +L R D +NDG+I E + L+
Sbjct: 102 GSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 77.3 bits (190), Expect = 6e-18
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLK-------- 150
E++ + + G KL +AF +YD+D +G IS E+ +++ +
Sbjct: 92 EYVIALHMTT-AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPD 150
Query: 151 -DAQLQQIVDKTILFADKDEDGKINFEEFC 179
+ ++ +K + K++D K+ +EF
Sbjct: 151 DENTPEKRAEKIWKYFGKNDDDKLTEKEFI 180
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 73.0 bits (180), Expect = 9e-18
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++ AF+++D + DG I E +++ + L DA++++ + + AD+D +G
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKE----ADEDGNG 60
Query: 172 KINFEEFCSV 181
I+ EF +
Sbjct: 61 VIDIPEFMDL 70
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 75.7 bits (187), Expect = 1e-17
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+ ++ + D ++ AFR++D DN G I+ +L +V K + G NL + +LQ++
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM 142
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + AD+++D +I+ +EF +
Sbjct: 143 IAE----ADRNDDNEIDEDEFIRI 162
Score = 62.2 bits (152), Expect = 1e-12
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+R AF ++D D G I EL ++ + G K ++++++ + DKD G I+FE
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRAL-GFEPKKEEIKKMISE----IDKDGSGTIDFE 84
Query: 177 EFCSV 181
EF ++
Sbjct: 85 EFLTM 89
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 75.3 bits (186), Expect = 1e-17
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 99 EFIQGVSQFSVKGDKESK----LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL 154
+F++ + + + LR AFR +D + DG IS EL + ++ ++G+ + +
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDI 127
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSV 181
++I+ D + DG+++FEEF +
Sbjct: 128 EEIIRD----VDLNGDGRVDFEEFVRM 150
Score = 65.2 bits (160), Expect = 5e-14
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
LR AFR +D D DG+I+ +L ++ M G + +L ++ + + + G ++F+
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTM-GYMPTEMELIELSQQ----INMNLGGHVDFD 67
Query: 177 EFCSV 181
+F +
Sbjct: 68 DFVEL 72
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 75.3 bits (186), Expect = 1e-17
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
+F + + +K D +++ AF+++D D+ G IS L +V K + G L D +L+ ++
Sbjct: 80 DFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL-GETLTDEELRAMI 138
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
++ D D DG+IN EF ++
Sbjct: 139 EE----FDLDGDGEINENEFIAI 157
Score = 63.7 bits (156), Expect = 3e-13
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++DM+NDGF+ EL +K + G L ++ ++D+ D + + ++
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKAL-GFELPKREILDLIDE----YDSEGRHLMKYD 79
Query: 177 EFCSV 181
+F V
Sbjct: 80 DFYIV 84
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 74.4 bits (184), Expect = 1e-17
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+F+ ++Q + D + ++ AF+++D D G IS L +V K + G NL D +LQ++
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM 120
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+D+ AD+D DG+++ +EF +
Sbjct: 121 IDE----ADRDGDGEVSEQEFLRI 140
Score = 62.5 bits (153), Expect = 4e-13
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+R AF ++D D G I EL ++ + G K ++++++ + DK+ GK+NF
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRAL-GFEPKKEEIKKMISE----IDKEGTGKMNFG 62
Query: 177 EFCSV 181
+F +V
Sbjct: 63 DFLTV 67
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 74.5 bits (184), Expect = 3e-17
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+ +++ D E ++R AFR++D D +G+IS EL V+ + G L D ++ ++
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM 125
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + AD D DG++N+EEF +
Sbjct: 126 IRE----ADIDGDGQVNYEEFVQM 145
Score = 63.3 bits (155), Expect = 6e-13
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+F
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTIDFP 67
Query: 177 EFCSV 181
EF ++
Sbjct: 68 EFLTM 72
Score = 34.4 bits (80), Expect = 0.009
Identities = 7/38 (18%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 99 EFIQGVSQFSVKGDKESK---LRFAFRIYDMDNDGFIS 133
EF+Q ++ G ++ +R R F
Sbjct: 141 EFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 74.8 bits (184), Expect = 3e-17
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 98 SEFIQGVSQFSVKGDKESK------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKD 151
E + +K E K + D D DG++S E L+ + G +L D
Sbjct: 79 EEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV-GPDLTD 137
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFC 179
+ + D +++G+I+ +EF
Sbjct: 138 DKAITCFNT----LDFNKNGQISRDEFL 161
Score = 52.8 bits (127), Expect = 4e-09
Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDA----QL 154
E + + ++ K++ + D+ DGFIS + + + A +
Sbjct: 3 EITESERAYHLR-----KMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEET 57
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSVSTASIITM 189
+Q + +I+ EE +T S++ M
Sbjct: 58 RQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKM 92
Score = 37.8 bits (88), Expect = 8e-04
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEF 178
+ IS E + + + ++ I++ D D+DG ++ EF
Sbjct: 65 ADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF 124
Query: 179 CSV 181
+
Sbjct: 125 KAF 127
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 75.3 bits (185), Expect = 3e-17
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF++ +L F D + + E + + + K +
Sbjct: 114 VEFLE-FRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL 172
Query: 158 VDKTILFADKDEDGKINFEEFC 179
+ DK+ G + F+EF
Sbjct: 173 FKE----LDKNGTGSVTFDEFA 190
Score = 56.4 bits (136), Expect = 3e-10
Identities = 10/72 (13%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDK-----TILFADKDED 170
+ F+ +D + G + E++ ++ + ++++ I + L + +
Sbjct: 49 RRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENK 108
Query: 171 GKINFEEFCSVS 182
G +F EF
Sbjct: 109 GSEDFVEFLEFR 120
Score = 32.6 bits (74), Expect = 0.060
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 9/59 (15%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEFCSV 181
++N G E F ++M+ +L +F D + ++ EEF
Sbjct: 104 KLENKGSEDFVE-FLEFRLMLCYIYDFFELTV------MFDEIDASGNMLVDEEEFKRA 155
Score = 26.8 bits (59), Expect = 3.9
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Query: 97 VSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNL 149
EF + V + G K F+ D + G ++ E F L
Sbjct: 149 EEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDE-F--AAWASAVKL 198
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 71.9 bits (177), Expect = 3e-17
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E +L+ AF+++D D +G+IS EL V+ + G L D +++Q++ + AD D DG
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIKE----ADLDGDG 60
Query: 172 KINFEEFCSV 181
++N+EEF +
Sbjct: 61 QVNYEEFVKM 70
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 73.3 bits (181), Expect = 5e-17
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+ +++ + D E +L AF+++D D +G IS EL V+ + G L D ++ ++
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEM 124
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + AD D DG IN+EEF +
Sbjct: 125 IRE----ADIDGDGHINYEEFVRM 144
Score = 62.9 bits (154), Expect = 4e-13
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G I+F
Sbjct: 12 FKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNGTIDFP 66
Query: 177 EFCSV 181
EF S+
Sbjct: 67 EFLSL 71
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 73.4 bits (181), Expect = 5e-17
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 99 EFIQGVSQF---SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
EF+ + + KG E +L FRI+D + DGFI EL ++L+ G ++ + ++
Sbjct: 77 EFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT-GEHVTEEDIE 135
Query: 156 QIVDKTILFADKDEDGKINFEEFCSVSTA 184
++ +DK+ DG+I+F+EF +
Sbjct: 136 DLMKD----SDKNNDGRIDFDEFLKMMEG 160
Score = 64.9 bits (159), Expect = 9e-14
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D D G IS EL V++M+ G N +L I+++ D+D G I+FE
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEE----VDEDGSGTIDFE 76
Query: 177 EFCSV 181
EF +
Sbjct: 77 EFLVM 81
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 73.0 bits (180), Expect = 7e-17
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 96 FVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
F + + + + +LR AFR+YD + +G+IS + ++L + L L
Sbjct: 72 FKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLD 130
Query: 156 QIVDKTILFADKDEDGKINFEEFCSV 181
++D+ D D G ++FEEF V
Sbjct: 131 AMIDE----IDADGSGTVDFEEFMGV 152
Score = 59.9 bits (146), Expect = 6e-12
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 117 LRFAFRIYDM-DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
L AFR ++ + G +S ++ +L+++ G + ++Q++D+ D +G I+F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVL-GIQQTKSTIRQLIDE----FDPFGNGDIDF 69
Query: 176 EEFCSV 181
+ F +
Sbjct: 70 DSFKII 75
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 74.0 bits (182), Expect = 7e-17
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 15/92 (16%)
Query: 98 SEFIQGVSQFSVKGDKES----------KLRFAFRIYDMDNDGFISNGELFQVLKMMVGN 147
+F+ G Q + K+ F I+D D G I+ E K+ G
Sbjct: 86 PQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-GI 144
Query: 148 NLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
+ + D D G ++ +E
Sbjct: 145 SPSQEDCEATFRH----CDLDNAGDLDVDEMT 172
Score = 53.2 bits (128), Expect = 4e-09
Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQ-----VLKMMVGNNLKDAQLQQIVDKTILFA-DKD 168
+ + F D++ +G I+ E+ + + + + Q+ + +
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKL-EATPEQTKRHQVCVEAFFRGCGME 78
Query: 169 EDGKINFEEFCS 180
+I F +F
Sbjct: 79 YGKEIAFPQFLD 90
Score = 27.8 bits (62), Expect = 2.1
Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 11/68 (16%)
Query: 125 DMDNDGFISNGE------LFQVLKMMVGNNLKDAQLQQIVDKTILFA-----DKDEDGKI 173
G E L ++ K A+ + + + A DKD G I
Sbjct: 71 FFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTI 130
Query: 174 NFEEFCSV 181
+E+ +
Sbjct: 131 TLDEWKAY 138
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 71.1 bits (175), Expect = 1e-16
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQ 156
F V ++ AF + D D GFI EL L++ L DA+ +
Sbjct: 29 AFFAKVGL---TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKA 85
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
+ D D DG I +E+
Sbjct: 86 FLKA----GDSDGDGAIGVDEWA 104
Score = 28.4 bits (64), Expect = 0.70
Identities = 5/37 (13%), Positives = 10/37 (27%), Gaps = 6/37 (16%)
Query: 146 GNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVS 182
L DA + + N++ F +
Sbjct: 4 SGILADADVAA------ALKACEAADSFNYKAFFAKV 34
Score = 26.8 bits (60), Expect = 1.9
Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 11/61 (18%)
Query: 123 IYDMDNDGFISNGELFQ--VLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
+ + + F L +++K A D+D+ G I +E
Sbjct: 16 LKACEAADSFNYKAFFAKVGLTAKSADDIKKA---------FFVIDQDKSGFIEEDELKL 66
Query: 181 V 181
Sbjct: 67 F 67
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 69.4 bits (171), Expect = 2e-16
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
L+ AFR +D D DG I+ EL + + + G L +L ++ + AD D+DG
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGL-GQPLPQEELDAMIRE----ADVDQDG 57
Query: 172 KINFEEFCSV 181
++N+EEF +
Sbjct: 58 RVNYEEFARM 67
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 72.6 bits (179), Expect = 2e-16
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM-VGNNLKDAQLQQ 156
++F+ K+ F+ +D+D +G IS EL ++ + N L D +
Sbjct: 113 TDFLAATIDKQ-TYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDS 171
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
++ + D + DG+I+F EF
Sbjct: 172 LLQE----VDLNGDGEIDFHEFM 190
Score = 63.4 bits (155), Expect = 5e-13
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+ LR F D+DN G +S+ E+ LK + G + Q++ D + G+I+
Sbjct: 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKI-GYQKIPPDIHQVLRD----IDSNASGQIH 111
Query: 175 FEEFCSVST 183
+ +F + +
Sbjct: 112 YTDFLAATI 120
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 69.6 bits (171), Expect = 3e-16
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D E ++R AFR+ D D +G+IS EL V+ + G L D ++ +++ + AD D DG
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIRE----ADIDGDG 80
Query: 172 KINFEEFCSVSTA 184
++N+EEF + TA
Sbjct: 81 QVNYEEFVQMMTA 93
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 71.5 bits (176), Expect = 3e-16
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+ F+ + D E + AF++ D D G I L ++L G +++ +
Sbjct: 78 TVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTG-GGRFTPEEIKNM 136
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
D G ++++ C V
Sbjct: 137 WAA----FPPDVAGNVDYKNICYV 156
Score = 56.4 bits (137), Expect = 1e-10
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF + D + DG I +L + M N+K+ +L + K+ G INF
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM--------IKEASGPINFT 78
Query: 177 EFCSV 181
F ++
Sbjct: 79 VFLTM 83
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 74.5 bits (183), Expect = 4e-16
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+ +++ D E ++R AFR++D D +G+IS EL V+ + G L D ++ ++
Sbjct: 368 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM 426
Query: 158 VDKTILFADKDEDGKINFEEFCSVSTA 184
+ + AD D DG++N+EEF + TA
Sbjct: 427 IRE----ADIDGDGQVNYEEFVQMMTA 449
Score = 65.7 bits (160), Expect = 4e-13
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
++ ++ + AF ++D D DG I+ EL V++ + G N +A+LQ ++++ D D +G
Sbjct: 309 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINE----VDADGNG 363
Query: 172 KINFEEFCSV 181
I+F EF ++
Sbjct: 364 TIDFPEFLTM 373
Score = 35.6 bits (82), Expect = 0.008
Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 26/97 (26%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMV------------------------ 145
K I+ D+ + + E+ +V
Sbjct: 242 KSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYN 301
Query: 146 -GNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ L + Q+ + + LF DKD DG I +E +V
Sbjct: 302 TRDQLTEEQIAEFKEAFSLF-DKDGDGTITTKELGTV 337
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 71.0 bits (175), Expect = 4e-16
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 99 EFIQGVSQFSVKGDKESK---LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
EF+ + + K L FR++D + DG+I EL +L+ G + + ++
Sbjct: 76 EFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIE 134
Query: 156 QIVDKTILFADKDEDGKINFEEFCSVSTA 184
+++ DK+ DG+I+++EF
Sbjct: 135 ELMKD----GDKNNDGRIDYDEFLEFMKG 159
Score = 59.5 bits (145), Expect = 9e-12
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 117 LRFAFRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINF 175
+ AF I+ + DG IS EL +V++M+ G N +LQ+++D+ D+D G ++F
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDE----VDEDGSGTVDF 74
Query: 176 EEFCSV 181
+EF +
Sbjct: 75 DEFLVM 80
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 71.9 bits (177), Expect = 4e-16
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+EFI K + + AFR++D+DNDG I+ EL +L +
Sbjct: 107 TEFIAAALD--RKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNR 164
Query: 158 VDKTILFADKDEDGKINFEEFC 179
V + I DK+ DGKI+F EF
Sbjct: 165 VKRMIRDVDKNNDGKIDFHEFS 186
Score = 56.9 bits (138), Expect = 1e-10
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
KL+ F + D D G+I+ +L + L+ G L ++D+ D D GKI+
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKD-GLKLP-YNFDLLLDQ----IDSDGSGKID 105
Query: 175 FEEFCSVST 183
+ EF + +
Sbjct: 106 YTEFIAAAL 114
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 69.5 bits (171), Expect = 5e-16
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK--MMVGNNLKDAQLQQ 156
EF V ++ AF + D D GFI EL L+ L DA+ +
Sbjct: 28 EFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKA 84
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
+ DKD DG I +EF
Sbjct: 85 FLAD----GDKDGDGMIGVDEFA 103
Score = 27.1 bits (61), Expect = 1.5
Identities = 7/33 (21%), Positives = 10/33 (30%), Gaps = 6/33 (18%)
Query: 148 NLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
LKDA + A +EF +
Sbjct: 5 GLKDADVAA------ALAACSAADSFKHKEFFA 31
Score = 26.4 bits (59), Expect = 3.7
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 15/61 (24%)
Query: 125 DMDNDGFISNGELFQ--VLKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEFCS 180
+ E F L +++K A F D+D+ G I +E
Sbjct: 17 ACSAADSFKHKEFFAKVGLASKSLDDVKKA-----------FYVIDQDKSGFIEEDELKL 65
Query: 181 V 181
Sbjct: 66 F 66
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 70.2 bits (173), Expect = 5e-16
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EF+ + + + E LR AFR +D + G+I L L + G+ LK + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNL-GDRLKPHEFAEF 120
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + + G+I ++ F +
Sbjct: 121 LGI----TETE-KGQIRYDNFINT 139
Score = 62.9 bits (154), Expect = 4e-13
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D + GFI+ L VLK G ++ A ++ ++ AD +GKI F
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQF-GVRVEPAAFNEMFNE----ADATGNGKIQFP 62
Query: 177 EFCSV 181
EF S+
Sbjct: 63 EFLSM 67
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 70.6 bits (174), Expect = 6e-16
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EFI + K ++E L AF +D D G+I+ EL Q + ++D +++++
Sbjct: 83 KEFIA-ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF---GVEDVRIEEL 138
Query: 158 VDKTILFADKDEDGKINFEEFC 179
+ D+D DG+I++ EF
Sbjct: 139 MRD----VDQDNDGRIDYNEFV 156
Score = 64.1 bits (157), Expect = 2e-13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ F + D D G I+ EL LK + G NLK++++ ++ AD D G I+++
Sbjct: 29 LKEMFNMIDADKSGQITFEELKAGLKRV-GANLKESEILDLMQA----ADVDNSGTIDYK 83
Query: 177 EFCSVS 182
EF + +
Sbjct: 84 EFIAAT 89
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 69.8 bits (172), Expect = 7e-16
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+ F+ + D E +R AF +D + GFI L ++L M G+ D ++ ++
Sbjct: 59 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM-GDRFTDEEVDEM 117
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ A D+ G N+ EF +
Sbjct: 118 YRE----APIDKKGNFNYVEFTRI 137
Score = 56.3 bits (137), Expect = 1e-10
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF + D + DGFI +L +L M G N D L+ + + G INF
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASM-GKNPTDEYLEGM--------MSEAPGPINFT 59
Query: 177 EFCSV 181
F ++
Sbjct: 60 MFLTM 64
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 69.9 bits (172), Expect = 8e-16
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
++ ++ AFR D + +G I EL Q+L + G+ L +++++++ +
Sbjct: 71 PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNL-GDALTSSEVEELMKE----VSVSG 125
Query: 170 DGKINFEEF 178
DG IN+E F
Sbjct: 126 DGAINYESF 134
Score = 52.9 bits (128), Expect = 2e-09
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ F+I+D DNDG +S EL L+ + G N +A+L I + + E
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSL-GKNPTNAELNTIKGQ----LNAKE-- 54
Query: 172 KINFEEFCSV 181
+ F +V
Sbjct: 55 -FDLATFKTV 63
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 68.8 bits (169), Expect = 9e-16
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQ 156
F V +++ F I D D GFI EL LK L A+ +
Sbjct: 29 SFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKA 85
Query: 157 IVDKTILFADKDEDGKINFEEFCS 180
+ D D DGKI EEF S
Sbjct: 86 F----LAAGDTDGDGKIGVEEFQS 105
Score = 25.3 bits (56), Expect = 6.9
Identities = 5/38 (13%), Positives = 12/38 (31%), Gaps = 6/38 (15%)
Query: 143 MMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
M + + L ++ + N++ F S
Sbjct: 1 MAITDILSAKDIESALS------SCQAADSFNYKSFFS 32
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 68.8 bits (169), Expect = 9e-16
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK--MMVGNNLKDAQLQQ 156
+F V K + ++ F+ D D GFI EL VLK G +L DA+ +
Sbjct: 29 KFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKA 85
Query: 157 IVDKTILFADKDEDGKINFEEFC 179
+ ADKD DGKI +EF
Sbjct: 86 FLKA----ADKDGDGKIGIDEFE 104
Score = 31.4 bits (72), Expect = 0.056
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 15/63 (23%)
Query: 123 IYDMDNDGFISNGELFQV--LKMMVGNNLKDAQLQQIVDKTILFA--DKDEDGKINFEEF 178
+ + +G ++ + F + LK M N++K F D D G I EE
Sbjct: 16 LDAVKAEGSFNHKKFFALVGLKAMSANDVKKV-----------FKAIDADASGFIEEEEL 64
Query: 179 CSV 181
V
Sbjct: 65 KFV 67
Score = 28.7 bits (65), Expect = 0.44
Identities = 6/36 (16%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Query: 146 GNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ LK +++ +D +G N ++F ++
Sbjct: 4 KDLLKADDIKKALD------AVKAEGSFNHKKFFAL 33
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 67.5 bits (166), Expect = 1e-15
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
S + F +D + DG +S E +V + + ++ D D +G++N
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAF-SPYFTQEDIVKFFEE----IDVDGNGELN 55
Query: 175 FEEFCSV 181
+EF S
Sbjct: 56 ADEFTSC 62
Score = 25.5 bits (57), Expect = 3.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 166 DKDEDGKINFEEFCSVSTA 184
DK++DGK++ +EF V+ A
Sbjct: 11 DKNKDGKLSLDEFREVALA 29
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 69.3 bits (170), Expect = 1e-15
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
+ + +++ + S+L F + I+ L + ++ + Q +V
Sbjct: 24 DMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83
Query: 159 DKTILFADKDEDGKINFEEFCSV 181
+ D D DG +N EFC +
Sbjct: 84 RE----GDLDGDGALNQTEFCVL 102
Score = 31.9 bits (73), Expect = 0.055
Identities = 2/31 (6%), Positives = 10/31 (32%), Gaps = 4/31 (12%)
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ + ++ + + +E+ V
Sbjct: 2 EPTEKSMLLE----TTSTTKMETKYEDMLPV 28
Score = 29.2 bits (66), Expect = 0.50
Identities = 7/60 (11%), Positives = 14/60 (23%), Gaps = 4/60 (6%)
Query: 124 YDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVST 183
++ L +M + + ++ L E I E S
Sbjct: 12 TTSTTKMETKYEDM---LPVMAEKMDVEEFVSELCKGFSLL-ADPERHLITAESLRRNSG 67
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 67.6 bits (166), Expect = 1e-15
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ ++ + AF ++D D G IS EL V++M+ G N +L I+++ D+D G
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEE----VDEDGSG 71
Query: 172 KINFEEFCSV 181
I+FEEF +
Sbjct: 72 TIDFEEFLVM 81
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 70.4 bits (173), Expect = 1e-15
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEF+ +L AF+ +D D G I+N EL ++ + D Q+
Sbjct: 107 SEFVTVCMDKQ-LLLSRERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQV 162
Query: 158 VDKTILFADKDEDGKINFEEFC 179
+ + DK+ DG+++FEEF
Sbjct: 163 LQE----CDKNNDGEVDFEEFV 180
Score = 56.1 bits (136), Expect = 2e-10
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLK----------MMVGNNLKDAQLQQIVDKT 161
++ +L FR D + DG + EL + + + ++ +A++ I+
Sbjct: 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS- 95
Query: 162 ILFADKDEDGKINFEEFCSVST 183
D D +G I + EF +V
Sbjct: 96 ---VDFDRNGYIEYSEFVTVCM 114
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 68.7 bits (169), Expect = 2e-15
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 98 SEFIQGVSQFSV--KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
+EF + D + L+ +++ D+D DG ++ E+ K ++
Sbjct: 56 NEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK-----KHGIEKVA 110
Query: 156 QIVDKTILFADKDEDGKINFEEFC 179
+ V K AD + DG I EEF
Sbjct: 111 EQVMK----ADANGDGYITLEEFL 130
Score = 63.3 bits (155), Expect = 2e-13
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
F+ D++ DG +S E+ + + LQ I D D +G+I+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKS----IDADGNGEIDQN 56
Query: 177 EFCSVSTA 184
EF +
Sbjct: 57 EFAKFYGS 64
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 69.0 bits (170), Expect = 2e-15
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
SEF+ +S+ D E +L AF+++D + DG IS EL VL + G L DA++ ++
Sbjct: 67 SEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI-GEKLTDAEVDEM 125
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + D G+IN ++F ++
Sbjct: 126 LRE----VS-DGSGEINIKQFAAL 144
Score = 62.9 bits (154), Expect = 3e-13
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D DN G IS EL V++ + G + +A++ ++++ D D + I F
Sbjct: 13 FKEAFALFDKDNSGSISASELATVMRSL-GLSPSEAEVADLMNE----IDVDGNHAIEFS 67
Query: 177 EFCSV 181
EF ++
Sbjct: 68 EFLAL 72
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 71.4 bits (175), Expect = 2e-15
Identities = 16/87 (18%), Positives = 33/87 (37%)
Query: 95 QFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL 154
+ + + +F + AF +YD D +G+I EL +LK + N ++ +
Sbjct: 171 RLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDI 230
Query: 155 QQIVDKTILFADKDEDGKINFEEFCSV 181
I + GK+ + +
Sbjct: 231 NNISTYKKNIMALSDGGKLYRTDLALI 257
Score = 69.1 bits (169), Expect = 1e-14
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM---VGNNLKDAQLQQIVDKTILFAD 166
+ + +R YD D+ GFI EL LK + + D +L + D + D
Sbjct: 98 QLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFD 157
Query: 167 KDEDGKINFEEFC 179
+ DGK+ E
Sbjct: 158 SNNDGKLELTEMA 170
Score = 56.4 bits (136), Expect = 4e-10
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDA--QLQQIVDKTILFADKDE 169
S+ + +D D G++ EL +++ + K A +L + + + +
Sbjct: 13 ITASQFFEIWLHFDADGSGYLEGKELQNLIQEL-LQARKKAGLELSPEMKTFVDQYGQRD 71
Query: 170 DGKINFEEFCSV 181
DGKI E V
Sbjct: 72 DGKIGIVELAHV 83
Score = 36.0 bits (83), Expect = 0.004
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 93 LYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMV--GNNLK 150
L F+ + ++ ++ +++D +NDG + E+ +++ N L
Sbjct: 125 LKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEM---ARLLPVQENFLL 181
Query: 151 DAQLQQIVDKTILFA----DKDEDGKINFEEFCSV 181
Q ++ K A D+D +G I+ E ++
Sbjct: 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDAL 216
Score = 33.7 bits (77), Expect = 0.026
Identities = 16/62 (25%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 124 YDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA----DKDEDGKINFEEFC 179
Y +DG I EL VL L Q + + D D G I EE
Sbjct: 67 YGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELK 126
Query: 180 SV 181
+
Sbjct: 127 NF 128
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 69.9 bits (172), Expect = 2e-15
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
EFI + K ++E L AF +D D G+I+ E+ Q K L D + +
Sbjct: 66 GEFIAATVHLN-KLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDM 121
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + D+D DG+I++ EF ++
Sbjct: 122 IKE----IDQDNDGQIDYGEFAAM 141
Score = 63.4 bits (155), Expect = 5e-13
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ F++ D DN G I+ EL LK + G+ L +++++ ++D AD D+ G I++
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDA----ADIDKSGTIDYG 66
Query: 177 EFCSVS 182
EF + +
Sbjct: 67 EFIAAT 72
Score = 30.7 bits (70), Expect = 0.18
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGEL 137
K LR A + D ++ I
Sbjct: 157 RKTLNLRDALGLVDNGSNQVIEGYFK 182
Score = 27.6 bits (62), Expect = 1.8
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 11/61 (18%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTI-------LFADKDEDGKINFEE 177
D DNDG I GE F MM ++ + KT+ L D + I
Sbjct: 126 DQDNDGQIDYGE-F--AAMMRKRKGNGGIGRRTMRKTLNLRDALGLV-DNGSNQVIEGYF 181
Query: 178 F 178
Sbjct: 182 K 182
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 67.7 bits (166), Expect = 3e-15
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQIVDKTILFADK 167
K ++ F I D D GFI EL +LK +L + + ++ DK
Sbjct: 36 KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAA----GDK 91
Query: 168 DEDGKINFEEFCSV 181
D DGKI EEF ++
Sbjct: 92 DGDGKIGVEEFSTL 105
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 68.4 bits (168), Expect = 3e-15
Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 98 SEFIQGVSQFSVKGDKESK--LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
F+ + + + + FR++D + +G + EL VL + G + + +++
Sbjct: 68 ETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTL-GEKMTEEEVE 126
Query: 156 QIVDKTILFADKDEDGKINFEEFCSVSTA 184
++ +D +G IN+E F +
Sbjct: 127 TVLA-----GHEDSNGCINYEAFLKHILS 150
Score = 56.1 bits (136), Expect = 1e-10
Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D DG I + V++ + G N +A++ +++ +D+ + +++FE
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRAL-GQNPTNAEVLKVLGN--PKSDELKSRRVDFE 68
Query: 177 EFCSV 181
F +
Sbjct: 69 TFLPM 73
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 69.5 bits (170), Expect = 4e-15
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 17/91 (18%)
Query: 99 EFIQGVSQFSVKGDKESK----------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNN 148
++++ F+ + + + + D D DG + EL ++K +
Sbjct: 102 DWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF---D 158
Query: 149 LKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
+ +K AD D+ GK+ E
Sbjct: 159 VPQEAAYTFFEK----ADTDKSGKLERTELV 185
Score = 56.4 bits (136), Expect = 3e-10
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGN-NLKDAQLQQI---VDKTILFADKDED 170
S+L F +D+D+DG + E+ M N D Q++++ V L +
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 171 GKINFEEFCS 180
+ E++
Sbjct: 96 NGLLREDWVE 105
Score = 34.8 bits (80), Expect = 0.009
Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA------ 165
+R F ++ + + + ++ + + + +L
Sbjct: 78 KMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVL 137
Query: 166 DKDEDGKINFEEFCSV 181
D D DG ++ +E ++
Sbjct: 138 DDDGDGTVDVDELKTM 153
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 67.6 bits (166), Expect = 6e-15
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 98 SEFIQGVSQFSVKGDKESK-----LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDA 152
+ + + D +K AF+++D ++ G +S G+L +L + G L DA
Sbjct: 61 DQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL-GEKLTDA 119
Query: 153 QLQQIVDKTILFADKDEDGKINFEEF 178
++ +++ + D +G+I++++F
Sbjct: 120 EVDELLKG----VEVDSNGEIDYKKF 141
Score = 59.5 bits (145), Expect = 7e-12
Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ F ++D G I+ L L+ + G N + +Q I++ + + +
Sbjct: 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAI-GYNPTNQLVQDIINADS---SLRDASSLTLD 61
Query: 177 EFCSV 181
+ +
Sbjct: 62 QITGL 66
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 67.2 bits (165), Expect = 1e-14
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+ F+ S D E +R AF ++D ++ + +L+ M G+N +++
Sbjct: 70 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENM-GDNFNKDEMRMT 128
Query: 158 VDKTILFADKDEDGKINFEEFCSVSTAS 185
+ A + GK ++ +F ++ S
Sbjct: 129 FKE----APVE-GGKFDYVKFTAMIKGS 151
Score = 57.1 bits (139), Expect = 7e-11
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
++ AF + D+D DGF+S ++ + + + G D +L ++ K+ G +NF
Sbjct: 20 MKEAFSMIDVDRDGFVSKEDIKAISEQL-GRAPDDKELTAML--------KEAPGPLNFT 70
Query: 177 EFCSV 181
F S+
Sbjct: 71 MFLSI 75
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 67.5 bits (165), Expect = 2e-14
Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDE 169
F I D D +G I+ E K G ++ D DE
Sbjct: 104 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA-GIIQSSEDCEETFRV----CDIDE 158
Query: 170 DGKINFEEF 178
G+++ +E
Sbjct: 159 SGQLDVDEM 167
Score = 49.4 bits (118), Expect = 6e-08
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 13/73 (17%)
Query: 116 KLRFAFRIYDMDNDGFISNGELFQVLKMMV----GNNLKDAQLQQIVDKTILFADKDEDG 171
+ + F D++++G IS E+ +V G + A+ + + A G
Sbjct: 17 RHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVE----AFFGGAG 72
Query: 172 -----KINFEEFC 179
+ ++ +
Sbjct: 73 MKYGVETDWPAYI 85
Score = 28.2 bits (63), Expect = 1.3
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 11/81 (13%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGE------LFQVLKMMVGNNLKDAQLQQIVDKTILFA 165
+++K G E + K+ K A+ + + + A
Sbjct: 54 PEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDA 113
Query: 166 -----DKDEDGKINFEEFCSV 181
DKD++G I +E+ +
Sbjct: 114 LFDIVDKDQNGAITLDEWKAY 134
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 66.4 bits (163), Expect = 2e-14
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+ F+ + D E LR AF ++D D GFI L +L+ M G+N +++ +
Sbjct: 68 TAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENM-GDNFSKEEIKNV 126
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
A + + N+ + +
Sbjct: 127 WKD----APLK-NKQFNYNKMVDI 145
Score = 56.0 bits (136), Expect = 2e-10
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L+ AF + D D DGFI +L + + G D +L ++ K+ G++NF
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSL-GRVPPDDELNAML--------KECPGQLNFT 68
Query: 177 EFCSV 181
F ++
Sbjct: 69 AFLTL 73
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 65.1 bits (159), Expect = 2e-14
Identities = 9/70 (12%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
K + + +D++ +G I L ++L+ + G +L++++ +
Sbjct: 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKKLIGE----VSSGSGE 83
Query: 172 KINFEEFCSV 181
++ +F +
Sbjct: 84 TFSYPDFLRM 93
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 64.1 bits (157), Expect = 3e-14
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
L+ F++ D DN G I+ EL LK + G+ L +++++ ++D AD D+ G I+
Sbjct: 23 GGLKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDA----ADIDKSGTID 77
Query: 175 FEEFCSV 181
+ EF +
Sbjct: 78 YGEFIAA 84
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 65.6 bits (161), Expect = 3e-14
Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 98 SEFIQGVSQFSVKGDKESK--LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
EF+ + + D+ + R++D + +G + EL VL + G + + +++
Sbjct: 66 EEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL-GEKMTEEEVE 124
Query: 156 QIVDKTILFADKDEDGKINFEEFCSVSTA 184
+++ +D +G IN+E F +
Sbjct: 125 ELMK-----GQEDSNGCINYEAFVKHIMS 148
Score = 56.4 bits (137), Expect = 9e-11
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D D I+ ++ + + + G N +A++ +I+ ++ I FE
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARAL-GQNPTNAEINKILGN--PSKEEMNAAAITFE 66
Query: 177 EFCSV 181
EF +
Sbjct: 67 EFLPM 71
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 64.6 bits (158), Expect = 4e-14
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQ 156
+F Q + S+++ FR D D G++ EL L+ L +++ +
Sbjct: 28 KFFQTSG---LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKS 84
Query: 157 IVDKTILFADKDEDGKINFEEFCSV 181
++D AD D DGKI +EF +
Sbjct: 85 LMDA----ADNDGDGKIGADEFQEM 105
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 66.6 bits (163), Expect = 4e-14
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+ F+ D+E + AF ++D + DG L + L G ++ Q
Sbjct: 109 TMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTW-GEKFSQDEVDQA 166
Query: 158 VDKTILFADKDEDGKINFEEFCSV 181
+ + A D +G I+ ++F +
Sbjct: 167 LSE----APIDGNGLIDIKKFAQI 186
Score = 57.3 bits (139), Expect = 1e-10
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF++ D D DGFIS ++ + G + +L +V + G INF
Sbjct: 59 FKEAFQLIDQDKDGFISKNDIRATFDSL-GRLCTEQELDSMV--------AEAPGPINFT 109
Query: 177 EFCSV 181
F ++
Sbjct: 110 MFLTI 114
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 63.7 bits (156), Expect = 4e-14
Identities = 14/70 (20%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ +++ AF ++D + G I EL ++ + G ++K ++ +++++ D++ +G
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-GFDVKKPEILELMNE----YDREGNG 58
Query: 172 KINFEEFCSV 181
I F++F +
Sbjct: 59 YIGFDDFLDI 68
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 63.8 bits (156), Expect = 6e-14
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM--VGNNLKDAQLQQIVDKTILFADK 167
S+L+ FRI D D GFI EL L+ L ++ + + AD
Sbjct: 36 SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAA----ADH 91
Query: 168 DEDGKINFEEFC 179
D DGKI EEF
Sbjct: 92 DGDGKIGAEEFQ 103
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 63.7 bits (155), Expect = 8e-14
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Query: 108 SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADK 167
+ F +D IS E + L D Q ++ ++
Sbjct: 17 KAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRR-VQILTDEQFDRLWNE----MPV 71
Query: 168 DEDGKINFEEFCS 180
+ G++ + +F S
Sbjct: 72 NAKGRLKYPDFLS 84
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 65.2 bits (159), Expect = 8e-14
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 14/88 (15%)
Query: 99 EFIQGVSQFSVKGDKESK-------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKD 151
+FI+ + + S ++ + D + DG I+ E L + +
Sbjct: 79 QFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL---GMSK 135
Query: 152 AQLQQIVDKTILFADKDEDGKINFEEFC 179
A+ + ++ D + +G+++ +E
Sbjct: 136 AEAAEAFNQ----VDTNGNGELSLDELL 159
Score = 58.2 bits (141), Expect = 3e-11
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMV---GNNLKDAQLQQIVDKTILF----- 164
+L+ F +D D +G + + + + + G + A++Q + +
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 165 --ADKDEDGKINFEEFCSV 181
A DG + E+F V
Sbjct: 65 KEAGVGSDGSLTEEQFIRV 83
Score = 36.3 bits (84), Expect = 0.003
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA----DKDEDGKINFEEFCS 180
+ +DG ++ + +V + ++ +A +++ + DK+ DG+IN +EF +
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQ-GEASFNRVLGPVVKGIVGMCDKNADGQINADEFAA 126
Query: 181 V 181
Sbjct: 127 W 127
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 64.8 bits (158), Expect = 1e-13
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 13/87 (14%)
Query: 99 EFIQGVSQFSVKGDKESK------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDA 152
EF+ G + L A + D D DG ++ + + L + +
Sbjct: 76 EFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF---GVPED 132
Query: 153 QLQQIVDKTILFADKDEDGKINFEEFC 179
+Q D D DGK+ E
Sbjct: 133 LARQAAAA----LDTDGDGKVGETEIV 155
Score = 56.7 bits (137), Expect = 1e-10
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 10/80 (12%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMM---VGNNLKDAQLQQIVDKT------- 161
+ E ++ F +D D +G I + K M G + + Q +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 162 ILFADKDEDGKINFEEFCSV 181
AD+D D +I EEF +
Sbjct: 61 AGIADRDGDQRITREEFVTG 80
Score = 37.4 bits (87), Expect = 0.001
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 6/61 (9%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA----DKDEDGKINFEEFCS 180
D D D I+ E + K + ++ + A D D DG + +
Sbjct: 65 DRDGDQRITREEFVTG--AVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTAR 122
Query: 181 V 181
Sbjct: 123 A 123
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 64.5 bits (158), Expect = 1e-13
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 98 SEFIQGVSQF-SVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQ 156
EF+ + + AF+ +D + GFIS EL VL + G L D + +
Sbjct: 66 EEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL-GERLSDEDVDE 124
Query: 157 IVDKTILFAD--KDEDGKINFEEFCSVSTA 184
I+ D +D +G + +E+F A
Sbjct: 125 IIKL----TDLQEDLEGNVKYEDFVKKVMA 150
Score = 57.6 bits (140), Expect = 4e-11
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 117 LRFAFRIYDM--DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
L+ F ++D DG + +L V + + G N ++ + + K + +
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCL-GINPRNEDVFAVGG-----THKMGEKSLP 64
Query: 175 FEEFCSV 181
FEEF
Sbjct: 65 FEEFLPA 71
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 64.2 bits (156), Expect = 1e-13
Identities = 12/89 (13%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
K + + +D++ +G I L ++L+ + G +L++++ + +
Sbjct: 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKRLIRE----VSSGSEE 99
Query: 172 KINFEEFCSV------STASIITMFPTFN 194
++ +F + + +I M+ N
Sbjct: 100 TFSYSDFLRMMLGKRSAILRMILMYEEKN 128
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 62.8 bits (153), Expect = 1e-13
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
G++ ++LR F D + G + E + + ++ A + + + D D D
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCTEL---RVRPADAEAVFQR----LDADRD 75
Query: 171 GKINFEEFCS 180
G I F+EF
Sbjct: 76 GAITFQEFAR 85
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 64.1 bits (156), Expect = 1e-13
Identities = 9/70 (12%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+K + + + +D++N+G I L ++++ + G ++++++ +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKMISE----VTGGVSD 101
Query: 172 KINFEEFCSV 181
I++ +F ++
Sbjct: 102 TISYRDFVNM 111
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 62.3 bits (152), Expect = 2e-13
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ F+ +D + DG IS+ EL LK + ++ ++++++ + D D DG
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTL--GSVTPDEVRRMMAE----IDTDGDG 61
Query: 172 KINFEEFCSV 181
I+F+EF
Sbjct: 62 FISFDEFTDF 71
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 62.3 bits (152), Expect = 2e-13
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+++ + + AF+++D DND ++ EL V++ + G N ++ +IV DKD G
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEIVKD----YDKDNSG 65
Query: 172 KINFEEFCSV 181
K + E F ++
Sbjct: 66 KFDQETFLTI 75
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 64.1 bits (157), Expect = 2e-13
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 98 SEFIQGVSQFSVKGDKESK--LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
E + + S K + AF+ +D + G IS+ E+ VLKM+ G + + Q
Sbjct: 66 EEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKML-GERITEDQCN 124
Query: 156 QIVDKTILFAD--KDEDGKINFEEF 178
I D +D DG I +E+
Sbjct: 125 DIFTF----CDIREDIDGNIKYEDL 145
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 117 LRFAFRIYDM--DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+R F ++D DG + ++ +L+ + G N +AQ+ Q K +
Sbjct: 11 VREVFDLFDFWDGRDGDVDAAKVGDLLRCL-GMNPTEAQVHQHGGT-----KKMGEKAYK 64
Query: 175 FEEFCSV 181
EE +
Sbjct: 65 LEEILPI 71
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 63.3 bits (155), Expect = 2e-13
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 98 SEFIQGVSQFSVKGDKESK--LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQ 155
+F+Q +++ + F+++D D G I GEL VL + G L + ++
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GEKLSNEEMD 115
Query: 156 QIVDKTILFADKDEDGKINFEEFCSVSTAS 185
+++ DG +N+ +F + A+
Sbjct: 116 ELLKG----VPVK-DGMVNYHDFVQMILAN 140
Score = 55.2 bits (134), Expect = 2e-10
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ AF ++D G I + +L+ G N A++ +I + +++ E
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRAC-GQNPTLAEITEI--------ESTLPAEVDME 57
Query: 177 EFCSV 181
+F V
Sbjct: 58 QFLQV 62
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 64.2 bits (157), Expect = 2e-13
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
+R FR D DG + + E+ L G + + Q ++ K D+ G
Sbjct: 91 FILSMREGFRKRDSSGDGRLDSNEVRAALLSS-GYQVSEQTFQALMRK----FDRQRRGS 145
Query: 173 INFEEFCSV 181
+ F+++ +
Sbjct: 146 LGFDDYVEL 154
Score = 56.2 bits (136), Expect = 2e-10
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 94 YQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQ 153
+ + + + + +L FR D D G IS EL L G A
Sbjct: 6 HHHMPTSTGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSA-GVPFSLAT 64
Query: 154 LQQIVDKTILFADKDEDGKINFEEFCSV 181
++++ DK+ G+I F+EF +
Sbjct: 65 TEKLLHM----YDKNHSGEITFDEFKDL 88
Score = 28.4 bits (64), Expect = 0.97
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 116 KLRFAFRIYDMDNDGFIS 133
++R F YD + G ++
Sbjct: 160 RVRNVFAFYDRERTGQVT 177
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 66.0 bits (161), Expect = 3e-13
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
LR + D D G +S E+ +VL+ + + D D+
Sbjct: 251 CLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSV----VDVDDSKS 306
Query: 173 INFEEFC 179
++++EF
Sbjct: 307 LSYQEFV 313
Score = 60.6 bits (147), Expect = 2e-11
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ + L FR D +++G +S E + + + + D +AD+DE
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRL------GFDKKSVQDALFRYADEDESD 238
Query: 172 KINFEEFC 179
+ F E+
Sbjct: 239 DVGFSEYV 246
Score = 60.6 bits (147), Expect = 2e-11
Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 12/144 (8%)
Query: 46 VVRNEDEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVS 105
+ + E E ++++ K + D + D+ +
Sbjct: 46 IAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASG 105
Query: 106 QFSVKGDKE-------SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIV 158
++ K + LR F + G S +L QVL + + + L+++
Sbjct: 106 YNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKY-ADTIPEGPLKKLF 164
Query: 159 DKTILFADKDEDGKINFEEFCSVS 182
+ D G++++ +V+
Sbjct: 165 VM----VENDTKGRMSYITLVAVA 184
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 65.1 bits (158), Expect = 4e-13
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLK---MMVGNNLKDAQLQQIVDKTILFAD 166
D + +R YD D+ G+IS EL LK + + +L + D + D
Sbjct: 99 PLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFD 158
Query: 167 KDEDGKINFEEFC 179
K++DG+++ +
Sbjct: 159 KNKDGRLDLNDLA 171
Score = 64.3 bits (156), Expect = 8e-13
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 110 KGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM---VGNNLKDAQLQQIVDKTILFAD 166
+ +++ F YD+ G + E+ +K M V ++ L + + + D
Sbjct: 191 QVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCD 250
Query: 167 KDEDGKINFEEFCSV 181
++DGKI E
Sbjct: 251 MNKDGKIQKSELALC 265
Score = 54.3 bits (130), Expect = 2e-09
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMV-----GNNLKDAQLQQIVDKTILFADKDE 169
+ ++ +D D++G+I EL + M+ + + D ++QQI + D
Sbjct: 11 AGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATF 70
Query: 170 DGKINFEEFCSV 181
DG++ EE ++
Sbjct: 71 DGRLQIEELANM 82
Score = 32.0 bits (72), Expect = 0.098
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 124 YDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILF------ADKDEDGKINFEE 177
YD DG + EL ++ N L + + +D ++ F D D G I+ E
Sbjct: 66 YDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAE 125
Query: 178 FCSV 181
+
Sbjct: 126 LKNF 129
Score = 31.6 bits (71), Expect = 0.13
Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 7/96 (7%)
Query: 93 LYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKM-------MV 145
L F+ + + + +I+D + DG + +L ++L +
Sbjct: 126 LKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFK 185
Query: 146 GNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ + ++ +K D G + E
Sbjct: 186 MDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGF 221
Score = 25.8 bits (56), Expect = 9.6
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 93 LYQFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK 142
+ FV + ++ V GD + DM+ DG I EL L
Sbjct: 218 VDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLG 267
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 63.5 bits (155), Expect = 5e-13
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
+EF+ G + K + + L+ AF D D DG+IS ++ ++ L + +
Sbjct: 93 TEFMAGCYR--WKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVH---DKVLDNNDIDNF 147
Query: 158 VDKTILFADKDEDG--------KINFEEFC 179
+ G KI+F+EF
Sbjct: 148 FLS----VHSIKKGIPREHIINKISFQEFK 173
Score = 59.6 bits (145), Expect = 1e-11
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+ SV + + F D +++G +S+ E++ VL + +K + +I+
Sbjct: 28 AHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASV---GIKKWDINRILQA--- 81
Query: 164 FADKDEDGKINFEEFCSVS 182
D ++ G I + EF +
Sbjct: 82 -LDINDRGNITYTEFMAGC 99
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 62.8 bits (153), Expect = 6e-13
Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 11/85 (12%)
Query: 99 EFIQGVSQFSVKGDKESK----LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL 154
FI + + + +S L FR D + D IS E M+ L
Sbjct: 74 TFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML---GLDKTMA 130
Query: 155 QQIVDKTILFADKDEDGKINFEEFC 179
D D + DG ++ EEF
Sbjct: 131 PASFDA----IDTNNDGLLSLEEFV 151
Score = 51.6 bits (124), Expect = 9e-09
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVL-KMMVGNNLKDAQLQQIVDK-----TILFADK 167
K++ F D D DG I+ + + + + +K + ++D
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAV 64
Query: 168 DEDGKINFEEFCSV 181
I+ F +
Sbjct: 65 AGGKGIDETTFINS 78
Score = 37.8 bits (88), Expect = 6e-04
Identities = 10/60 (16%), Positives = 20/60 (33%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSVSTA 184
+ I +K MV N + ++ + D +ED I+ +E+
Sbjct: 63 AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 62.2 bits (152), Expect = 7e-13
Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
++++ +S D +L F +D + G+++ ++ +L G+ L D +
Sbjct: 67 EQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW-GDALTDQEAIDA 125
Query: 158 VDKTILFADKDEDGKINFEEFC 179
++ + I+++ FC
Sbjct: 126 LN------AFSSEDNIDYKLFC 141
Score = 53.0 bits (128), Expect = 2e-09
Identities = 7/70 (10%), Positives = 20/70 (28%), Gaps = 9/70 (12%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+K + + + G IS + + G ++I +
Sbjct: 12 EKVDESDVRIYFNEKSSGGKISIDNASYNARKL-GLAPSSIDEKKI--------KELYGD 62
Query: 172 KINFEEFCSV 181
+ +E++
Sbjct: 63 NLTYEQYLEY 72
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 64.7 bits (158), Expect = 1e-12
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 51 DEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNVD----------STFIYYIILYQFVSEF 100
DE ++G +F D + L + +D S I Y SEF
Sbjct: 351 DELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEY-------SEF 403
Query: 101 IQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDK 160
I + ++ AF+++D D G IS ELF++ ++++ +L+ I+++
Sbjct: 404 IASAIDRT-ILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA-DSSIQMEELESIIEQ 461
Query: 161 TILFADKDEDGKINFEEFC 179
D ++DG+++F EF
Sbjct: 462 ----VDNNKDGEVDFNEFV 476
Score = 48.5 bits (116), Expect = 3e-07
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 17/81 (20%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLK-------------MMVGNNLKDAQLQQIVDKT 161
+L FR D +NDG + EL + + + + Q+ ++
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPL- 389
Query: 162 ILFADKDEDGKINFEEFCSVS 182
D D G I + EF + +
Sbjct: 390 ---LDMDGSGSIEYSEFIASA 407
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 59.5 bits (145), Expect = 1e-12
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
+ F+ +D + DG IS EL L+ + G+ D ++Q+++ + D D DG I
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTL-GSTSAD-EVQRMMAE----IDTDGDGFI 55
Query: 174 NFEEFCSVSTASIITM 189
+F EF S A+ M
Sbjct: 56 DFNEFISFCNANPGLM 71
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 64.0 bits (156), Expect = 2e-12
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 19/133 (14%)
Query: 51 DEFIQGVSQFSVKGDKDIDPLSKPAH----FPSIHNVDSTFIYYIILYQFVSEFIQGVSQ 106
E I G S+ S + D + + + +I Y SEF+
Sbjct: 366 QELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDY-------SEFVTVAMD 418
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFAD 166
+ KL AF+ +D D +G IS EL V ++L+ ++++ D
Sbjct: 419 RK-SLLSKDKLESAFQKFDQDGNGKISVDELASVFG---LDHLESKTWKEMISG----ID 470
Query: 167 KDEDGKINFEEFC 179
+ DG ++FEEFC
Sbjct: 471 SNNDGDVDFEEFC 483
Score = 50.9 bits (122), Expect = 6e-08
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL---QQIVDKTILFADKDEDG 171
+L FR D + DG + EL + G + L + VD + AD D +G
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 172 KINFEEFCSVS 182
I++ EF +V+
Sbjct: 406 YIDYSEFVTVA 416
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 61.5 bits (150), Expect = 2e-12
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
+ + FR YD DN G I EL Q L G L D ++ K D+ G+
Sbjct: 72 YITDWQNVFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDILIRK----FDRQGRGQ 126
Query: 173 INFEEF--CSVSTASIITMFPTF 193
I F++F + + +F +
Sbjct: 127 IAFDDFIQGCIVLQRLTDIFRRY 149
Score = 53.4 bits (129), Expect = 2e-09
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 114 ESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKI 173
+S L F+ D D G IS+ EL Q L ++ I+ D++ +
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISM----FDRENKAGV 61
Query: 174 NFEEFCS 180
NF EF
Sbjct: 62 NFSEFTG 68
Score = 27.2 bits (61), Expect = 2.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 116 KLRFAFRIYDMDNDGFIS 133
+L FR YD D DG+I
Sbjct: 141 RLTDIFRRYDTDQDGWIQ 158
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 63.2 bits (154), Expect = 4e-12
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 19/133 (14%)
Query: 51 DEFIQGVSQFSVKGDKDIDPLSKPAHFPSI-HNVD---STFIYYIILYQFVSEFIQGVSQ 106
E I+G + ++ + + +I VD + +I Y SEFI
Sbjct: 375 KELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEY-------SEFISVCMD 427
Query: 107 FSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFAD 166
E +LR AF ++D D G I+ EL + ++ + ++ + AD
Sbjct: 428 KQ-ILFSEERLRRAFNLFDTDKSGKITKEELANLFG---LTSISEKTWNDVLGE----AD 479
Query: 167 KDEDGKINFEEFC 179
+++D I+F+EF
Sbjct: 480 QNKDNMIDFDEFV 492
Score = 49.7 bits (119), Expect = 1e-07
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLKMM-------VGNNLKDAQLQQIVDKTILFADK 167
+L F+ D + DG + EL + ++ + ++ I+ + D
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE----VDF 410
Query: 168 DEDGKINFEEFCSVS 182
D++G I + EF SV
Sbjct: 411 DKNGYIEYSEFISVC 425
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 62.4 bits (152), Expect = 7e-12
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 51 DEFIQGVSQFSVKGDKDIDPLSKPAHFPSIHNV-------DSTFIYYIILYQFVSEFIQG 103
E I+G + +D L A + V + +I Y SEF+
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEY-------SEFVTV 407
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
+L AFR++D DN G IS+ EL + +++ + ++ +
Sbjct: 408 AMDRK-TLLSRERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSE--- 460
Query: 164 FADKDEDGKINFEEFC 179
DK+ DG+++F+EF
Sbjct: 461 -VDKNNDGEVDFDEFQ 475
Score = 50.5 bits (121), Expect = 7e-08
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 14/78 (17%)
Query: 115 SKLRFAFRIYDMDNDGFISNGELFQVLK----------MMVGNNLKDAQLQQIVDKTILF 164
+L F D + DG + EL + K M+ + + ++ Q++D
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA---- 390
Query: 165 ADKDEDGKINFEEFCSVS 182
D D++G I + EF +V+
Sbjct: 391 VDFDKNGYIEYSEFVTVA 408
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 60.4 bits (147), Expect = 8e-12
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
L FR D D + E Q L + G L A+ + + K D++ G ++ E
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKL-GLVLDQAEAEGVCRK----WDRNGSGTLDLE 93
Query: 177 EFCSV 181
EF
Sbjct: 94 EFLRA 98
Score = 57.0 bits (138), Expect = 2e-10
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLK------MMVGNNLKDA 152
EF++ + + +E+ + AF D DG ++ +L V + G +D
Sbjct: 94 EFLRALRP-PMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDE 152
Query: 153 QLQQIVDKTILFADKDEDGKINFEEFC 179
L++ +D F ++DG++ EF
Sbjct: 153 VLRRFLDN---FDSSEKDGQVTLAEFQ 176
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 56.8 bits (138), Expect = 1e-11
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 114 ESKLRFAFRIYDMD--NDGFISNGELFQVLKMMVGNNLKD-AQLQQIVDKTILFADKDED 170
+++ AF ++ + IS EL V++ + + LK + L +++++ DK+ D
Sbjct: 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEE----VDKNGD 59
Query: 171 GKINFEEFCSV 181
G+++FEEF +
Sbjct: 60 GEVSFEEFLVM 70
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 59.5 bits (144), Expect = 1e-11
Identities = 12/91 (13%), Positives = 24/91 (26%), Gaps = 15/91 (16%)
Query: 99 EFIQGVSQFSVKGDKESK--------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLK 150
E+++ ++ +K + F F + D D I E V +
Sbjct: 85 EWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY---GIP 141
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ D + E F +
Sbjct: 142 KSDCDAAFDT----LSDGGKTMVTREIFARL 168
Score = 48.3 bits (115), Expect = 2e-07
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 11/79 (13%)
Query: 114 ESKLRFAFR-IYDMDNDGFISNGELFQVLKMMV---GNNLKDAQLQQIVDKTILF----- 164
+K+ F YD ++DG I + +K + + + L
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLR 70
Query: 165 --ADKDEDGKINFEEFCSV 181
AD++ED ++ EE+ +
Sbjct: 71 KYADENEDEQVTKEEWLKM 89
Score = 38.3 bits (89), Expect = 6e-04
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA----DKDEDGKINFE 176
+ D + D ++ E ++ V + K L + + K + F D D I+
Sbjct: 70 RKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKH 129
Query: 177 EFCSVSTA 184
E+ +V +
Sbjct: 130 EYSTVYMS 137
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 55.9 bits (135), Expect = 8e-11
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 104 VSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTIL 163
V++++V K R F +D G ++ + +L ++L AQL I +
Sbjct: 3 VAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWN---- 55
Query: 164 FADKDEDGKINFEEFC 179
+D D+DGK+ EEF
Sbjct: 56 LSDIDQDGKLTAEEFI 71
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 54.0 bits (130), Expect = 3e-10
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ F F + D G+++ +L +++ L++ + VDK + D+ DGK+ F+
Sbjct: 11 MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQ 69
Query: 177 EFCSV 181
F S+
Sbjct: 70 SFFSL 74
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 55.7 bits (134), Expect = 4e-10
Identities = 10/89 (11%), Positives = 24/89 (26%), Gaps = 15/89 (16%)
Query: 99 EFIQGVSQFSVKGDKESK--------LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLK 150
E++ + + + F F+ D+ DG + E K L+
Sbjct: 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF---QLQ 137
Query: 151 DAQLQQIVDKTILFADKDEDGKINFEEFC 179
A + + + + +
Sbjct: 138 CADVPAVYNV----ITDGGKVTFDLNRYK 162
Score = 46.1 bits (109), Expect = 1e-06
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 103 GVSQFSVKGDKESKLRFAFR-IYDMDNDGFISNGEL---FQVLKMMVGNNLKDAQ----- 153
G++ F ++ K++F F DM++DG I + + K + +L DA
Sbjct: 1 GLNDF-----QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQ 55
Query: 154 --LQQIVDKTILFADKDEDGKINFEEFCS 180
L+ AD ++D +++EE+ +
Sbjct: 56 ASLEDEWRDLKGRADINKDDVVSWEEYLA 84
Score = 37.2 bits (86), Expect = 0.001
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFA----DKDEDGKINFE 176
D++ D +S E + + + A L I F D DG ++ E
Sbjct: 66 KGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLE 125
Query: 177 EFCSVSTA 184
EF +
Sbjct: 126 EFQNYCKN 133
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 55.9 bits (135), Expect = 4e-10
Identities = 6/80 (7%), Positives = 17/80 (21%), Gaps = 8/80 (10%)
Query: 113 KESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
F + G + E+ L+ + G + +
Sbjct: 115 FMELAYNLFVMNARARSGTLEPHEILPALQQL-GFYINQRTSLLLHRL-----FARGMAF 168
Query: 173 INFEEF--CSVSTASIITMF 190
+ + A + +
Sbjct: 169 CDLNCWIAICAFAAQTRSAY 188
Score = 49.8 bits (119), Expect = 6e-08
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
D+ +++ F D D G + EL G L +++ D D +G
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRMMRI----FDTDFNG 102
Query: 172 KINFEEFCSV 181
I+F EF ++
Sbjct: 103 HISFYEFMAM 112
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 51.8 bits (125), Expect = 9e-10
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
F+ D++ DG +S E+ + + LQ I D D +G+I+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKS----IDADGNGEIDQN 56
Query: 177 EFCSV 181
EF
Sbjct: 57 EFAKF 61
Score = 35.6 bits (83), Expect = 8e-04
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM 144
E VS+ E L+ F+ D D +G I E + +
Sbjct: 20 EEVKAFVSKKR-AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 51.2 bits (123), Expect = 3e-09
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 113 KESKLRF--AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
K ++ F D D DGF+S E+ ++ L L I D +
Sbjct: 6 PAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK---TGLPSTLLAHIWS----LCDTKDC 58
Query: 171 GKINFEEFC 179
GK++ ++F
Sbjct: 59 GKLSKDQFA 67
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 51.3 bits (123), Expect = 3e-09
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 113 KESKLRF--AFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
E + + F+ D +GFI + L +L I + +D D+D
Sbjct: 5 DEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS---KLPILELSHIWE----LSDFDKD 57
Query: 171 GKINFEEFC 179
G + +EFC
Sbjct: 58 GALTLDEFC 66
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 51.3 bits (123), Expect = 4e-09
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 105 SQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILF 164
+ + ++ FR D FIS + L +L I +
Sbjct: 12 EPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWE----L 64
Query: 165 ADKDEDGKINFEEFC 179
+D D DG + EFC
Sbjct: 65 SDADCDGALTLPEFC 79
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 47.5 bits (113), Expect = 8e-08
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 125 DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
IS ++L+ + + L D ++ DK I D + DG+I+F+E+ ++
Sbjct: 24 YSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTL 80
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 48.5 bits (116), Expect = 9e-08
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ + F D D G + + EL Q + +M G L L IV + ++G
Sbjct: 67 AALNAWKENFMTVDQDGSGTVEHHELRQAIGLM-GYRLSPQTLTTIVKR------YSKNG 119
Query: 172 KINFEEF 178
+I F+++
Sbjct: 120 RIFFDDY 126
Score = 36.6 bits (85), Expect = 0.002
Identities = 13/55 (23%), Positives = 19/55 (34%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
DG + EL + L N + I D+D GK+ F F +
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 47.2 bits (112), Expect = 1e-07
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 117 LRFAFRIY--DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+ F Y + ++ EL ++L + + L + K + D + D +++
Sbjct: 15 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVD 74
Query: 175 FEEFCSV 181
F+E+C
Sbjct: 75 FQEYCVF 81
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 47.8 bits (114), Expect = 2e-07
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ R F +D D G + EL + L M G L + I + +G
Sbjct: 100 AVLNGWRQHFISFDTDRSGTVDPQELQKALTTM-GFRLSPQAVNSIAKR------YSTNG 152
Query: 172 KINFEEF--CSVSTASIITMFPTF 193
KI F+++ C V ++ F
Sbjct: 153 KITFDDYIACCVKLRALTDSFRRR 176
Score = 38.2 bits (89), Expect = 6e-04
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDED 170
G + L F DG I EL + L + + D+D
Sbjct: 29 GQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMS 87
Query: 171 GKINFEEFCS 180
G + F EF
Sbjct: 88 GTMGFNEFKE 97
Score = 26.7 bits (59), Expect = 4.5
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 116 KLRFAFRIYDMDNDGFIS 133
L +FR D G ++
Sbjct: 168 ALTDSFRRRDTAQQGVVN 185
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 48.1 bits (115), Expect = 5e-07
Identities = 9/81 (11%), Positives = 15/81 (18%), Gaps = 8/81 (9%)
Query: 98 SEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQI 157
F + + D I+ + Q L + +
Sbjct: 365 HRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLD---AGGIPRTAQSEE 421
Query: 158 VDKTILFADKDEDGKINFEEF 178
DGK F
Sbjct: 422 TR-----VWHRRDGKWQIVHF 437
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 46.2 bits (110), Expect = 8e-07
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ R F +D D G + EL + L M G L + I + G
Sbjct: 69 AVLNGWRQHFISFDSDRSGTVDPQELQKALTTM-GFRLNPQTVNSIAKRY------STSG 121
Query: 172 KINFEEF 178
KI F+++
Sbjct: 122 KITFDDY 128
Score = 34.3 bits (79), Expect = 0.011
Identities = 12/55 (21%), Positives = 18/55 (32%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
DG I EL + L + + D+D G + F EF +
Sbjct: 13 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 67
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 44.8 bits (106), Expect = 8e-07
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ + EL +++ + + L++ + Q++VDK + D + DG+ +F+EF +
Sbjct: 23 GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAF 77
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 44.8 bits (106), Expect = 9e-07
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
+R + N G + + LK + L D L +I D AD D G ++ +EF
Sbjct: 17 YRQVEAGNTGRVLALDAAAFLKK---SGLPDLILGKIWD----LADTDGKGVLSKQEFF 68
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 45.1 bits (107), Expect = 2e-06
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ K + ++ +D+D G I + EL + G +L + I+ + DE G
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAA-GFHLNEHLYSMIIRR-----YSDEGG 127
Query: 172 KINFEEFCSVSTASIITMFPTF 193
++F+ F S + MF F
Sbjct: 128 NMDFDNFISC-LVRLDAMFRAF 148
Score = 37.0 bits (86), Expect = 0.001
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKT----ILFADK 167
++ + R F +D +S EL +L V D + T + D
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDS 58
Query: 168 DEDGKINFEEFCSV 181
D GK+ FEEF +
Sbjct: 59 DTTGKLGFEEFKYL 72
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 43.6 bits (103), Expect = 2e-06
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 105 SQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILF 164
S ++VK + ++K F +GF+S ++ VL L L ++ +
Sbjct: 5 SPWAVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNS---KLPVDILGRVWE----L 56
Query: 165 ADKDEDGKINFEEFC 179
+D D DG ++ +EF
Sbjct: 57 SDIDHDGMLDRDEFA 71
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 44.7 bits (105), Expect = 3e-06
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 99 EFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNN---LKDAQLQ 155
E Q + +++LR F + D + DG ++ E+ +++ + N +
Sbjct: 83 ELKDFYEQLT-DQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERAD 141
Query: 156 QIVDKTILFADKDEDGKINFEEF 178
+ + D G I E+
Sbjct: 142 EYTALIMEELDPTNLGYIEMEDL 164
Score = 33.9 bits (77), Expect = 0.016
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Query: 111 GDKESKLRFAFRIYDM------DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILF 164
G S FA +++D ++ EL + + D +L+ D
Sbjct: 53 GMDGSDE-FAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGF-DNRLRTFFD----M 106
Query: 165 ADKDEDGKINFEEFCSVSTASIIT 188
DK+ DG++ EE + S
Sbjct: 107 VDKNADGRLTAEEVKEIIALSASA 130
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 43.7 bits (103), Expect = 3e-06
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 95 QFVSEFIQGVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQL 154
QF + F + +++ ++ +K F GFI+ + + L L
Sbjct: 13 QFPTPFGGSLDTWAITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ---SGLPQPVL 68
Query: 155 QQIVDKTILFADKDEDGKINFEEFC 179
QI AD + DG+++ EF
Sbjct: 69 AQIWA----LADMNNDGRMDQVEFS 89
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 42.3 bits (100), Expect = 3e-06
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 117 LRFAFRIYDMD--NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
L+ F Y + +S EL Q+++ + LK + +D DK+ DG+++
Sbjct: 9 LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKG---PRTLDDLFQELDKNGDGEVS 65
Query: 175 FEEFCS 180
FEEF
Sbjct: 66 FEEFQV 71
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding
protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Length = 113
Score = 43.0 bits (101), Expect = 4e-06
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 117 LRFAFRIY--DMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKIN 174
+ F Y + ++ EL ++L + + L + K + D + D +++
Sbjct: 24 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVD 83
Query: 175 FEEFCSV 181
F+E+C
Sbjct: 84 FQEYCVF 90
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 42.2 bits (99), Expect = 8e-06
Identities = 11/78 (14%), Positives = 29/78 (37%), Gaps = 11/78 (14%)
Query: 112 DKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVG-----------NNLKDAQLQQIVDK 160
+ F ++D+++DG + EL + + + + ++ +
Sbjct: 17 PNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREH 76
Query: 161 TILFADKDEDGKINFEEF 178
+ D ++D + EEF
Sbjct: 77 VMKNVDTNQDRLVTLEEF 94
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 41.3 bits (97), Expect = 1e-05
Identities = 10/55 (18%), Positives = 25/55 (45%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ ++ EL ++L + + L + K + D + D +++F+E+C
Sbjct: 24 GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 78
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 41.4 bits (97), Expect = 1e-05
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
N+ IS E + + ++ + ++D+ + D D DG+++F+EF ++
Sbjct: 27 GNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNL 81
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 42.2 bits (99), Expect = 2e-05
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 114 ESKLRFA--FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDG 171
+ K + F +G I+ + + L + L +I AD D+DG
Sbjct: 48 KDKPTYDEIFYTLS-PVNGKITGANAKKEMVKS---KLPNTVLGKIWK----LADVDKDG 99
Query: 172 KINFEEFC 179
++ EEF
Sbjct: 100 LLDDEEFA 107
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 39.8 bits (93), Expect = 4e-05
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ +S EL +L+ + + L + VDK + D++ DG+++F+EF +
Sbjct: 23 GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVL 77
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 39.8 bits (93), Expect = 5e-05
Identities = 12/55 (21%), Positives = 27/55 (49%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ ++ GEL +++ + L+ + + VDK + D + D +++F EF
Sbjct: 23 GSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVF 77
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 39.4 bits (92), Expect = 6e-05
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
+ +S GEL Q+L + N +K+ + + ++D+ D ++D +++F+EF S
Sbjct: 26 GHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 79
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 39.4 bits (92), Expect = 6e-05
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ +S GEL ++L + + L + +V+K + D ++D +++F EF +
Sbjct: 24 GDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVL 78
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 38.2 bits (89), Expect = 2e-04
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ +S EL +++K + + +D + DK+ D +I+F+E+
Sbjct: 24 GSKLTLSRKELKELIKKELCLGEMK---ESSIDDLMKSLDKNSDQEIDFKEYSVF 75
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1mr8_A
Length = 93
Score = 38.2 bits (89), Expect = 2e-04
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
N + +L ++L+ ++ + D D + DG +NF+EF +
Sbjct: 24 GNFHAVYRDDLKKLLETESPQYIRK----KGADVWFKELDINTDGAVNFQEFLIL 74
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 38.0 bits (88), Expect = 3e-04
Identities = 11/56 (19%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQL-QQIVDKTILFADKDEDGKINFEEFCSV 181
+ ++ GE ++++ + N LK +++++ + D + D +++FEEF +
Sbjct: 26 GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIML 81
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 37.5 bits (87), Expect = 3e-04
Identities = 9/55 (16%), Positives = 29/55 (52%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ +S GE+ ++L + + + + ++ + K + D++ D +++F+E+
Sbjct: 25 GDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVF 79
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 37.5 bits (87), Expect = 3e-04
Identities = 8/50 (16%), Positives = 22/50 (44%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ EL ++L+ + + +K + D ++D +++F E+
Sbjct: 29 LCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRS 78
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 39.1 bits (90), Expect = 5e-04
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 117 LRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFE 176
+ R D + D ++ EL LK + + D ++I D + + E
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKEL-NIQVDDGYARKIFR----ECDHSQTDSLEDE 67
Query: 177 EFCS 180
E +
Sbjct: 68 EIET 71
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 36.7 bits (85), Expect = 8e-04
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 132 ISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
+S E +++ + + LKD +D+ + D ++D ++ F E+
Sbjct: 41 LSVNEFKELVTQQLPHLLKD---VGSLDEKMKSLDVNQDSELKFNEYWR 86
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases,
like, EF-hand, structural genomics, structural genomics
CON SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 37.6 bits (87), Expect = 0.001
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 103 GVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMM---VGNNLKDAQLQQIVD 159
+F+ + + F+ + G + + +L++ ++ G + L +
Sbjct: 64 DQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTL 122
Query: 160 KTILFADKDEDGKINFEEFCSVSTASIITMFPTF 193
+ D G+++F + M TF
Sbjct: 123 R-----YSDSVGRVSFPSLVCF-LMRLEAMAKTF 150
Score = 28.0 bits (62), Expect = 1.4
Identities = 7/55 (12%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQ-QIVDKTILFADKDEDGKINFEEFCS 180
I +L +L + + + +G+++ EEF
Sbjct: 16 PRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFAR 70
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 38.2 bits (88), Expect = 0.001
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 103 GVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTI 162
G +F + K + ++ ++ D G I + EL + G +L I+ +
Sbjct: 792 GFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAFEAA-GFHLNQHIYSMIIRR-- 848
Query: 163 LFADKDEDGKINFEEF--CSVSTASIITMFPTF 193
++D+ G ++F+ F C V + MF F
Sbjct: 849 -YSDE--TGNMDFDNFISCLV---RLDAMFRAF 875
Score = 36.7 bits (84), Expect = 0.004
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 103 GVSQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTI 162
G+ +F++ ++ FR +D+D G +S E+ ++ G L Q IV +
Sbjct: 595 GLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAA-GFKLPCQLHQVIVAR-- 651
Query: 163 LFADKDEDGKINFEEF--CSVSTASIITMFPTF 193
FA D++ I+F+ F C V + +F F
Sbjct: 652 -FA--DDELIIDFDNFVRCLV---RLEILFKIF 678
Score = 29.4 bits (65), Expect = 0.80
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 111 GDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKT----ILFAD 166
++E + R F +D +S EL +L V D + T + D
Sbjct: 727 SEEERQFRKLFVQLA-GDDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMD 784
Query: 167 KDEDGKINFEEFC 179
D GK+ FEEF
Sbjct: 785 SDTTGKLGFEEFK 797
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB:
2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 35.9 bits (83), Expect = 0.001
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQL--QQIVDKTILFADKDEDGKINFEEFCSV 181
D I L ++K N L + DK+ED KI+F EF S+
Sbjct: 21 RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSL 77
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 37.2 bits (85), Expect = 0.001
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 121 FRIYDMD-NDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
F D DG++S+ EL + ++ ++ + D D D I +E+
Sbjct: 161 FGQLDQHPIDGYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWA 213
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 37.5 bits (86), Expect = 0.002
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 121 FRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEF-- 178
+R D+D G +++ E+ + L+ G L Q IV + FA D++ I+F+ F
Sbjct: 611 YREIDVDRSGTMNSYEMRKALEEA-GFKLPCQLHQVIVAR---FA--DDELIIDFDNFVR 664
Query: 179 CSVSTASIITMFPTF 193
C V + +F F
Sbjct: 665 CLV---RLEILFKIF 676
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 37.5 bits (86), Expect = 0.002
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 13/131 (9%)
Query: 55 QGVSQFSVKGDKDIDPLSKPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVSQFSVKGDKE 114
++Q K + + + + + + + D E
Sbjct: 391 DMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGPDEAIEDGEEGSEDDAE 450
Query: 115 SKLRFAFRIYDM------DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKD 168
+ YD DG +S + MVG L ++ L +I +D D
Sbjct: 451 WVVTKDKSKYDEIFYNLAPADGKLSGS---KAKTWMVGTKLPNSVLGRIWK----LSDVD 503
Query: 169 EDGKINFEEFC 179
DG ++ EEF
Sbjct: 504 RDGMLDDEEFA 514
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free,
signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A
2cnp_A 2jtt_A
Length = 90
Score = 34.0 bits (78), Expect = 0.006
Identities = 9/55 (16%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 127 DNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCSV 181
+ +S EL ++++ + K + + + D+++D ++NF+E+ +
Sbjct: 24 GDKHTLSKKELKELIQKELTIGSKLQD--AEIARLMEDLDRNKDQEVNFQEYVTF 76
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.0 bits (80), Expect = 0.012
Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 34/142 (23%)
Query: 1 MNTYRYRINHITIISTSSSKCISYIILYPITRLLFLNKSCHDLIIVVRNEDEFIQGVSQF 60
M+ Y R +T+ S + +++L P T F+ L +++F + + +
Sbjct: 1 MDAYSTR--PLTLSHGS----LEHVLLVP-TASFFI---ASQL------QEQFNKILPEP 44
Query: 61 SVKGDKDIDPLSKP---AHFPS--IHNVD----STF--IYYIILYQFVSEFIQG------ 103
+ D +P + F V+ F + + L +F + +++G
Sbjct: 45 TEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHAL 104
Query: 104 VSQFSVKGDKE-SKLRFAFRIY 124
++ + D K + + Y
Sbjct: 105 AAKLLQENDTTLVKTKELIKNY 126
Score = 34.6 bits (79), Expect = 0.019
Identities = 27/211 (12%), Positives = 59/211 (27%), Gaps = 65/211 (30%)
Query: 12 TIISTSSSKCISYIILYPITRLLF-LNKSCHDL-------IIVVRNEDEFIQGV--SQFS 61
I+ + S ++ + +LF + C++ ++ + E +GV S
Sbjct: 281 VAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS 340
Query: 62 VKG------DKDID------PLSKPAHFPSIHNVDSTFI---YYIILYQFVSEF-----I 101
+ ++ P K S+ N + LY
Sbjct: 341 ISNLTQEQVQDYVNKTNSHLPAGKQVEI-SLVNGAKNLVVSGPPQSLYGLNLTLRKAKAP 399
Query: 102 QGVSQFSVKGDKESKLRFAFR---I-------Y----------DMDNDGF---------- 131
G+ Q + + KL+F+ R + D+ +
Sbjct: 400 SGLDQSRIPFSER-KLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIP 458
Query: 132 ---ISNGELFQVLKMMVGNNLKDAQLQQIVD 159
+G +VL + + D ++ V
Sbjct: 459 VYDTFDGSDLRVLSGSISERIVDCIIRLPVK 489
Score = 30.8 bits (69), Expect = 0.29
Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 91/215 (42%)
Query: 2 NTYRYRINHITIISTSSSKCISYIILYPITRLLFLNKSCHDLIIVVRNEDEFIQGVSQFS 61
TY + +I S+ L L ++ D E F QG+
Sbjct: 178 QTYHVLVG--DLIKFSAE------------TLSELIRTTLD------AEKVFTQGL---- 213
Query: 62 VKGDKDIDP-LSKPAHFPSIHNVDSTFIYY--IILYQFVS----------------EFIQ 102
+I L P++ P + S I I + Q +++
Sbjct: 214 -----NILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLK 268
Query: 103 GVSQ----------FSVKGDKES-------KLRFAFRIYDMDNDGFISNGELFQVLKM-- 143
G + + ES + F I G E + +
Sbjct: 269 GATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFI------GVRCY-EAYPNTSLPP 321
Query: 144 ----------------MVG-NNLKDAQLQQIVDKT 161
M+ +NL Q+Q V+KT
Sbjct: 322 SILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKT 356
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.1 bits (72), Expect = 0.12
Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 65/204 (31%)
Query: 18 SSKCISYIILYP--ITRLLFLNKSCHDLIIVVRNEDEFIQGVSQFSVKGDKD-----IDP 70
S + I +II+ ++ L L + ++ E + V +F + + + P
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRL-------FWTLLSKQE--EMVQKFVEEVLRINYKFLMSP 97
Query: 71 LSKPAHFPS------------IHNVDSTFIYYII------------LYQFVSE---FIQG 103
+ PS ++N + F Y + L + I G
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 104 VSQF-------SVKGDKESKLRFAFRIYDMDNDGFISNGELF---QVLKMMVGNNLKDAQ 153
V V + + + F+I+ +++ VL+M+ L
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIF------WLNLKNCNSPETVLEML--QKL---- 205
Query: 154 LQQIVDKTILFADKDEDGKINFEE 177
L QI +D + K+
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHS 229
Score = 29.8 bits (66), Expect = 0.57
Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 53/206 (25%)
Query: 1 MNTYRYRINHITIISTSSSKCISY---IILYPITRLLFLNKSCHDLIIV--VRNEDEFIQ 55
+ Y+I+ + S I I + RLL + L+++ V+N
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA--- 258
Query: 56 GVSQFSVK-------GDKDI-DPLS--KPAHFPSIHNVDSTFIYYIILYQFVSEFIQGVS 105
+ F++ K + D LS H H+ + + + S
Sbjct: 259 -WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT----------LTPD--EVKS 305
Query: 106 QFS-VKGDKESKLR-------------FAFRIYDMDN--DGF--ISNGELFQVLKMMVGN 147
+ L A I D D + ++ +L +++ + N
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL-N 364
Query: 148 NLKDAQLQQIVDKTILFADKDEDGKI 173
L+ A+ +++ D+ +F I
Sbjct: 365 VLEPAEYRKMFDRLSVF---PPSAHI 387
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein;
2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1
PDB: 1eg4_A
Length = 261
Score = 28.1 bits (62), Expect = 1.9
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 6/74 (8%)
Query: 105 SQFSVKGDKESKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILF 164
+ +V + L + +YD G I + + +L+D + + +
Sbjct: 122 NLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLED-KYRYLFK---QV 177
Query: 165 ADKDEDGKINFEEF 178
A G +
Sbjct: 178 ASS--TGFCDQRRL 189
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM
barrel domain, hydrolase, calcium binding, phospholipid
binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Length = 816
Score = 28.4 bits (62), Expect = 1.9
Identities = 7/60 (11%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 121 FRIYDMDND-GFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFC 179
FR+ ++ + I + + L + + ++ + + D + +F+ F
Sbjct: 160 FRLTTVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFF 219
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle,
oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus}
SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Length = 661
Score = 27.9 bits (62), Expect = 2.6
Identities = 11/50 (22%), Positives = 15/50 (30%), Gaps = 6/50 (12%)
Query: 123 IYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGK 172
YD FI N +K G K + I+ A G+
Sbjct: 155 TYDPKTQEFILNSPTVTSIKWWPGGLGKTSNH------AIVLAQLITQGE 198
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2;
phospholipase C, phosphoinositide phospholipase,
PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens}
SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Length = 799
Score = 26.5 bits (57), Expect = 7.4
Identities = 8/58 (13%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Query: 123 IYDMDNDGFISNGELFQVLKMMVGNNLKDAQLQQIVDKTILFADKDEDGKINFEEFCS 180
++++G I FQ+ ++ A + K D + S
Sbjct: 156 KMQLNSEGKIPVKNFFQMFPADR-KRVEAALSACHLPK--GKNDAINPEDFPEPVYKS 210
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.140 0.404
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,891,791
Number of extensions: 160600
Number of successful extensions: 1225
Number of sequences better than 10.0: 1
Number of HSP's gapped: 838
Number of HSP's successfully gapped: 327
Length of query: 195
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 106
Effective length of database: 4,216,824
Effective search space: 446983344
Effective search space used: 446983344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (24.8 bits)