BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11003
(96 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 58/59 (98%)
Query: 34 IDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFK 92
+DADEI+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD DGNGEVDFK
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 59
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 58/62 (93%)
Query: 31 LNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVD 90
+ DADEI+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD DGNGEVD
Sbjct: 11 CSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVD 70
Query: 91 FK 92
FK
Sbjct: 71 FK 72
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 110 bits (276), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 58/62 (93%)
Query: 31 LNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVD 90
+ DADEI+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD DGNGEVD
Sbjct: 12 CSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVD 71
Query: 91 FK 92
FK
Sbjct: 72 FK 73
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/58 (89%), Positives = 57/58 (98%)
Query: 35 DADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFK 92
DADEI+RLGKRF+KLDLDNSG+LS++EFMSLPELQQNPLVQRVIDIFD DGNGEVDFK
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 58
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein
1 (Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein
1 (Chp1)
Length = 208
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 38 EIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKG 93
+I RL RF LD +G LS ++F +PEL NPL R+I+ F +G +V+F+G
Sbjct: 27 QITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRG 82
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 38 EIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKG 93
+I RL RF LD +G LS ++F +PEL NPL R+I+ F +G +V+F+G
Sbjct: 27 QITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRG 82
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 41 RLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKG 93
RL RFR LD + G LS + + L NPL R+I+ F DG+ VDF G
Sbjct: 30 RLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPG 82
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 41 RLGKRFRKLDLDNSGALSIDEFMSL---------PELQQNPLVQRVIDIFDEDGNGEVDF 91
+L F+ DLD G +S E + + E Q + R + DEDG+G V F
Sbjct: 115 KLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 2 MNFVYIHEVSNDIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDE 61
M I+++ ++N W LN I D+ R+ + F +D D SG L I+E
Sbjct: 21 MGAACIYQMPPSVRNTWWFPL--------LNTIPLDQYTRIYQWFMGVDRDRSGTLEINE 72
Query: 62 FM--SLPE-LQQNPLVQ-RVIDIFDEDGNGEVDF 91
M P ++ +P R++ IFD D NG + F
Sbjct: 73 LMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISF 106
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 2 MNFVYIHEVSNDIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDE 61
M I+++ ++N W LN I D+ R+ + F +D D SG L I+E
Sbjct: 21 MGAACIYQMPPSVRNTWWFPL--------LNTIPLDQYTRIYQWFMGVDRDRSGTLEINE 72
Query: 62 FM--SLPE-LQQNPLVQ-RVIDIFDEDGNGEVDF 91
M P ++ +P R++ IFD D NG + F
Sbjct: 73 LMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISF 106
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 18/73 (24%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSID-------EFMSLPELQQNPLVQ-----------RVI 78
DE ++L + FRKLD +N G L D EFM L + N L+Q ++
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLM 387
Query: 79 DIFDEDGNGEVDF 91
+ D DG+G +++
Sbjct: 388 PLLDMDGSGSIEY 400
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 49 LDLDNSGALSIDEFMSLPE----LQQNPLVQRVIDIFDEDGNGEVDFK 92
LD+D SG++ EF++ L ++R +FD+DG+G++ K
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTK 437
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 344 PTEAELQDMINEVDADGNGTIDF 366
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 286 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 344
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 345 PTEAELQDMINEVDADGNGTIDF 367
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 344 PTEAELQDMINEVDADGNGTIDF 366
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 344 PTEAELQDMINEVDADGNGTIDF 366
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 248 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 306
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 307 PTEAELQDMINEVDADGNGTIDF 329
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DGNG +DF
Sbjct: 344 PTEAELQDMINEVDADGNGTIDF 366
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E NL +++ ++I + F D D G ++ E + + L QN
Sbjct: 284 DFKEDGNILGHKLEYNLP-DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DG+G +DF
Sbjct: 343 PTEAELQDMINEVDADGDGTIDF 365
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E NL +++ ++I + F D D G ++ E + + L QN
Sbjct: 284 DFKEDGNILGHKLEYNLP-DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DG+G +DF
Sbjct: 343 PTEAELQDMINEVDADGDGTIDF 365
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ DEDG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDEDGDGECDFQ 72
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ DEDG+GE DF+
Sbjct: 44 LEEIKEQEVVDKVMETLDEDGDGECDFQ 71
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ D+I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 14 IKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNP 72
K D + + E N S +++ ++I + F D D G ++ E + + L QNP
Sbjct: 252 FKEDGNILGHKLEYN-SRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 310
Query: 73 L---VQRVIDIFDEDGNGEVDF 91
+Q +I+ D DGNG +DF
Sbjct: 311 TEAELQDMINEVDADGNGTIDF 332
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
D+I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.0 bits (71), Expect = 0.10, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ + + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQN 343
Query: 72 PLVQRVIDIFDE---DGNGEVDF 91
P + D+ +E DGNG +DF
Sbjct: 344 PTEAELQDMINEVGADGNGTIDF 366
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 28 NLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDE 83
N +++ ++I + F D D G ++ E + + L QNP +Q +I+ D
Sbjct: 2 NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 61
Query: 84 DGNGEVDF 91
DGNG +DF
Sbjct: 62 DGNGTIDF 69
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 285 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DG+G +DF
Sbjct: 344 PTEAELQDMINEVDADGDGTIDF 366
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 13 DIKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQN 71
D K D + + E N + +++ ++I + F D D G ++ E + + L QN
Sbjct: 284 DFKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 72 PL---VQRVIDIFDEDGNGEVDF 91
P +Q +I+ D DG+G +DF
Sbjct: 343 PTEAELQDMINEVDADGDGTIDF 365
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 14 IKNDWSSIKPSTELNLSLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNP 72
K D + + E N + +++ ++I + F D D G ++ E + + L QNP
Sbjct: 252 FKEDGNILGHKLEYN-TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 310
Query: 73 L---VQRVIDIFDEDGNGEVDF 91
+Q +I+ D DGNG +DF
Sbjct: 311 TEAELQDMINEVDADGNGTIDF 332
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 31 LNKIDADEIRRLGKRFRKLDL-DNSGALSIDEFMSLPEL----QQNPLVQRVIDIFDEDG 85
++K+ +++++ L FR + + SG +S D+ + E+ Q ++++ID FD G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 86 NGEVDF 91
NG++DF
Sbjct: 64 NGDIDF 69
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 88 EVDF 91
+DF
Sbjct: 354 TIDF 357
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 46 FRKLDLDNSGALSIDE---FMSLPELQQN-PLVQRVIDIFDEDGNGEVD 90
F+++D++ GA+S +E F+S +N L+Q + D DGNGE+D
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEID 54
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 46 FRKLDLDNSGALSIDE---FMSLPELQQNP-LVQRVIDIFDEDGNGEVD 90
F+++D++ GA+S +E F+S +N L+Q + D DGNGE+D
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEID 54
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 46 FRKLDLDNSGALSIDE---FMSLPELQQNP-LVQRVIDIFDEDGNGEVD 90
F+++D++ GA+S +E F+S +N L+Q + D DGNGE+D
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEID 54
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 4 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 63
Query: 88 EVDF 91
+DF
Sbjct: 64 TIDF 67
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQ 72
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 44 LEEIKEQEVVDKVMETLDSDGDGECDFQ 71
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQ 72
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDSDGDGECDFQ 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 8 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 67
Query: 88 EVDF 91
+DF
Sbjct: 68 TIDF 71
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 44 LEEIKEQEVVDKVMETLDSDGDGECDFQ 71
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 88 EVDF 91
+DF
Sbjct: 61 TIDF 64
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 33 KIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGE 88
++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 89 VDF 91
+DF
Sbjct: 61 IDF 63
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDNDGDGECDFQ 72
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 44 LEEIKEQEVVDKVMETLDNDGDGECDFQ 71
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D DG+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDNDGDGECDFQ 72
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 46 FRKLDLDNSGALSIDEFMSLPELQQNPL----VQRVIDIFDEDGNGEVDF 91
FR +D D SGA+S+ E + P ++++ ++D++ +GE+ F
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITF 82
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 33 KIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGE 88
++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 89 VDF 91
+DF
Sbjct: 61 IDF 63
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 33 KIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGE 88
++ ++I + F D D G ++ E + + L QNP +Q +I+ D DGNG
Sbjct: 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 89 VDF 91
+DF
Sbjct: 63 IDF 65
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++ E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++++E + + L QNP +Q +I D DGNG ++F
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++++E + + L QNP +Q +I D DGNG ++F
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNGEVDF 91
++I + F D D G ++++E + + L QNP +Q +I D DGNG ++F
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 46 FRKLDLDNSGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVD 90
F K D + G LS+DEF + P Q +V+ +I D DGNGE++
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI-DVDGNGELN 55
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 46 FRKLDLDNSGALSIDEFMSLPE----LQQNPLVQRVIDIFDEDGNGEVD 90
F++LD + G++S +E + ++ L+Q + D DGNGE+D
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEID 54
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E ++ L QNP +Q I+ D DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNG 62
Query: 88 EVDF 91
+DF
Sbjct: 63 TIDF 66
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 41 RLGKRFRKLDLDNSGALSIDEFMSLPELQ--QNPLVQRVIDIFDEDGNGEVDFK 92
+L F+K D D +G +S+DE S+ L ++ + +I D + +G+VDF+
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFE 197
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E ++ L QNP +Q I+ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 41 RLGKRFRKLDLDNSGALSIDEFMSLPELQ--QNPLVQRVIDIFDEDGNGEVDFK 92
+L F+K D D +G +S+DE S+ L ++ + +I D + +G+VDF+
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFE 480
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 8 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 16 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 73
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 65 LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
L E+++ +V +V++ D +G+GE DF+
Sbjct: 45 LEEIKEQEVVDKVMETLDSNGDGECDFQ 72
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPLVQRVIDIF---DEDGNG 87
+++ +++ + F D D G ++ E + + L QNP + D+ D DGNG
Sbjct: 2 DQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNG 61
Query: 88 EVDF 91
VDF
Sbjct: 62 TVDF 65
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQNPL--VQRVIDIFDEDGNGEVDF 91
AD++ R+ KRF D + G +S+ E +L L VQR++ D DG+G +DF
Sbjct: 2 ADDMERIFKRF---DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 57
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGNG 87
+++ ++I + F D D G ++ E + + L QNP +Q +I+ D DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 88 EVDF 91
+DF
Sbjct: 62 TIDF 65
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 31 LNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDEDGN 86
++++ ++I + F D D G ++ E + + L NP +Q +I+ D DGN
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 87 GEVDF 91
G +DF
Sbjct: 61 GTIDF 65
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQNPL--VQRVIDIFDEDGNGEVDF 91
AD++ R+ KRF D + G +S+ E +L L VQR++ D DG+G +DF
Sbjct: 1 ADDMERIFKRF---DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 56
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|4H8S|A Chain A, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|B Chain B, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|C Chain C, Crystal Structure Of Human Appl2barph Domain
pdb|4H8S|D Chain D, Crystal Structure Of Human Appl2barph Domain
Length = 407
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 54 SGALSIDEFMSLPELQQNPLVQRVIDIFDEDGNGEVDFKGKLL 96
S A ++D+ + LQ +P + ++ +F+ED D+ +LL
Sbjct: 22 SNAPAVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLL 64
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin
Delta At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin
Delta At 2.4 Angstroms
Length = 193
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG LS++EF + P + + V FD +G+G +DF+
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFR 83
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 68 LQQNPL---VQRVIDIFDEDGNGEVDF 91
L QNP +Q +ID DEDG+G VDF
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDF 74
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S+ E ++ L Q P + +I+ DEDG+G +DF+
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S+ E ++ L Q P + +I+ DEDG+G +DF+
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDGNGEVDFK 92
I F D D G +S E ++ L QNP + +I DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo
Form
Length = 190
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 32 NKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGN 86
+ D E+++ K F K D SG L+ EF + P + + V ++FD D N
Sbjct: 20 TRFDKKELQQWYKGFFK-DCP-SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKN 77
Query: 87 GEVDFK 92
G +DFK
Sbjct: 78 GYIDFK 83
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 30 SLNKIDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIF 81
+L + DE+RR+ ++D D G +S DEF + LV+ V IF
Sbjct: 39 TLGSVTPDEVRRM---MAEIDTDGDGFISFDEFTDFARANRG-LVKDVSKIF 86
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 55 GALSIDEFMSLPELQQNPLVQRVIDIF 81
+ ++ +SLPEL+ NP +R+ +F
Sbjct: 74 AQVPFEQILSLPELKANPFKERICRVF 100
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib
(Calcium-And Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding
Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding
Protein
Length = 183
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 55 GALSIDEFMSLPELQQNPLVQRVIDIF 81
+ ++ +SLPEL+ NP +R+ +F
Sbjct: 43 AQVPFEQILSLPELKANPFKERICRVF 69
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 55 GALSIDEFMSLPE-LQQNPL---VQRVIDIFDEDGNGEVDF 91
G +S E + L QNP +Q ID DEDG+G VDF
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDF 74
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 12/54 (22%)
Query: 49 LDLDNSGALSIDEFMSLPELQQNPLVQ------------RVIDIFDEDGNGEVD 90
D +N G L + E L +Q+N L++ + +++D+DGNG +D
Sbjct: 156 FDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYID 209
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 33 KIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-----LPELQQNPLVQRVIDIFDEDGNG 87
++ +EI L + F+ +D DNSG ++ DE EL ++ ++ ++D D D +G
Sbjct: 16 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE-IKDLMDAADIDKSG 74
Query: 88 EVDF 91
+D+
Sbjct: 75 TIDY 78
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 34 IDADEIRRLGKRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDGNGEV 89
I DE+ + + F+ D D +G +S E SL + ++ +I D DG+G+V
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 90 DFK 92
DF+
Sbjct: 90 DFE 92
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 66 PEL--QQNPLVQRVIDIFDEDGNGEVDFK 92
PEL +Q ++ D+FD DG G +D K
Sbjct: 23 PELTEEQKQEIREAFDLFDADGTGTIDVK 51
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 66 PEL--QQNPLVQRVIDIFDEDGNGEVDFK 92
PEL +Q ++ D+FD DG G +D K
Sbjct: 23 PELTEEQKQEIREAFDLFDADGTGTIDVK 51
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE-LQQNPLVQR---VIDIFDEDGNGEVDFK 92
I F D D G +S ++ L QNP + +I+ DEDG+G +DF+
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDEF----MSLPELQQNPLVQRVIDIFDEDGNGEVDF 91
A I+ L + FR+LD D S +L DEF L + + V +D +G+G +D
Sbjct: 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDL 92
Query: 92 K 92
+
Sbjct: 93 E 93
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 35 DADEIRRLGKRFRKLDLDNSGALSIDEF-MSLPELQQNPL----VQRVIDIFDEDGNGEV 89
D +EI R F+ D + G + DEF + ++ + PL V+ + DEDGNG +
Sbjct: 6 DEEEILRA---FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVI 62
Query: 90 D 90
D
Sbjct: 63 D 63
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 44 KRFRKLDLDNSGALSIDE 61
K F+ DLDNSG L +DE
Sbjct: 156 KTFKHCDLDNSGKLDVDE 173
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 33 KIDADEIRRLGKRFRKLDLDNSGALSIDEFMS-----LPELQQNPLVQRVIDIFDEDGNG 87
++ +EI L + F+ +D DNSG ++ DE EL ++ ++ ++D D D +G
Sbjct: 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE-IKDLMDAADIDKSG 61
Query: 88 EVDF 91
+D+
Sbjct: 62 TIDY 65
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 39 IRRLGKRFRKLDLDNSGALSIDEFMSLPE 67
+ RL KRF DLD+ G DE + P+
Sbjct: 35 LSRLYKRFDTFDLDSDGKXEXDEVLYWPD 63
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 7 IHEVSNDIKNDWSSIKPSTELNLSLNKI----DADEIRRLGKRFRKLDLDNSGALSIDEF 62
I E + D S + EL +++ + +EI+++ +D D SG + +EF
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM---IADIDKDGSGTIDFEEF 66
Query: 63 MSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
+ + E + + +FD+D G++ FK
Sbjct: 67 LQMMTAKMGERDSREEIMKAFRLFDDDETGKISFK 101
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 44 KRFRKLDLDNSGALSIDEFMSLP-ELQQNPL---VQRVIDIFDEDGNGEV 89
K FR D D +G +S + EL +N +Q +ID D DG+GEV
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEV 134
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 74 VQRVIDIFDEDGNGEVDFK 92
V +V+ DEDG+GEVDF+
Sbjct: 54 VDKVMKELDEDGDGEVDFQ 72
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With
Calcium Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium
Sensor In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr,
22 Structures
Length = 201
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 83
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 54 SGALSIDEFMSL-----PELQQNPLVQRVIDIFDEDGNGEVDFK 92
SG ++ EF ++ PE Q V FD + +G +DFK
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFK 84
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 44 KRFRKLDLDNSGALSIDE 61
K F+ DLDNSG L +DE
Sbjct: 153 KTFQHCDLDNSGELDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 46 FRKLDLDNSGALSIDE 61
FR DLDNSG L +DE
Sbjct: 155 FRHCDLDNSGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 46 FRKLDLDNSGALSIDE 61
FR DLDNSG L +DE
Sbjct: 155 FRHCDLDNSGDLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 46 FRKLDLDNSGALSIDE 61
FR DLDNSG L +DE
Sbjct: 155 FRHCDLDNSGDLDVDE 170
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 38 EIRRLGKRFRKLDLDNSGALSIDEFM-SLPELQQN---PLVQRVIDIFDEDGNGEVDF 91
EI L F LD+DNSG LS E + L ++ P + +V+ D + +G++ +
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHY 112
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 7 IHEVSNDIKNDWSSIKPSTELNLSLNKIDAD----EIRRLGKRFRKLDLDNSGALSIDEF 62
+ E N I D S EL L ++ A+ EI L + D+DNSG + EF
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLX---QAADVDNSGTIDYKEF 85
Query: 63 MS----LPELQQNPLVQRVIDIFDEDGNGEV 89
++ L ++++ + FD+DG+G +
Sbjct: 86 IAATLHLNKIEREDHLFAAFTYFDKDGSGYI 116
>pdb|1XMM|B Chain B, Structure Of Human Dcps Bound To M7gdp
pdb|1XMM|A Chain A, Structure Of Human Dcps Bound To M7gdp
pdb|1XMM|C Chain C, Structure Of Human Dcps Bound To M7gdp
pdb|1XMM|D Chain D, Structure Of Human Dcps Bound To M7gdp
Length = 342
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDE 61
AD +LGKR R+LD++ + A S +E
Sbjct: 7 ADAAPQLGKRKRELDVEEAHAASTEE 32
>pdb|1XML|B Chain B, Structure Of Human Dcps
pdb|1XML|A Chain A, Structure Of Human Dcps
Length = 342
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDE 61
AD +LGKR R+LD++ + A S +E
Sbjct: 7 ADAAPQLGKRKRELDVEEAHAASTEE 32
>pdb|1ST0|B Chain B, Structure Of Dcps Bound To M7gpppg
pdb|1ST0|A Chain A, Structure Of Dcps Bound To M7gpppg
pdb|1ST4|B Chain B, Structure Of Dcps Bound To M7gpppa
pdb|1ST4|A Chain A, Structure Of Dcps Bound To M7gpppa
Length = 337
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 36 ADEIRRLGKRFRKLDLDNSGALSIDE 61
AD +LGKR R+LD++ + A S +E
Sbjct: 2 ADAAPQLGKRKRELDVEEAHAASTEE 27
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 69 QQNPLVQRVIDIFDEDGNGEVDFK 92
+Q ++ D+FD DG+G +D K
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAK 50
>pdb|3H86|B Chain B, Crystal Structure Of Adenylate Kinase From Methanococcus
Maripaludis
pdb|3H86|A Chain A, Crystal Structure Of Adenylate Kinase From Methanococcus
Maripaludis
pdb|3H86|C Chain C, Crystal Structure Of Adenylate Kinase From Methanococcus
Maripaludis
pdb|3H86|G Chain G, Crystal Structure Of Adenylate Kinase From Methanococcus
Maripaludis
Length = 192
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 25 TELN---LSLNKIDADEI--RRLGKRFRKLDLDNSGALSIDEFM 63
TELN + + + D DEI RRL RK DL+ + ++ +FM
Sbjct: 111 TELNPDIVIVVETDGDEILMRRLSDESRKRDLETTASIEEHQFM 154
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 26 ELNLSLNKIDADEIRRLGKRFRKLD--LDNSGALSIDEF---MSLPELQQNPLVQRVIDI 80
EL S+ +E+ L + F+KL + + G + +EF + ++N R+ D+
Sbjct: 23 ELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDV 82
Query: 81 FDEDGNGEVDF 91
FD NG ++F
Sbjct: 83 FDVKRNGVIEF 93
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 37 DEIRRLGKRFRKLDLDNSGALSIDEFM----SLPELQQNPLVQRVIDIFDEDGNGEV 89
DEI+R F+ D D++G +SI L E + ++ +I+ FD DG+GE+
Sbjct: 96 DEIKRA---FQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEI 149
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 40 RRLGKRFRKLDLDNSGALSID---EFMS-LPELQQNPLVQRVIDIFDEDGNGEVDFK 92
+ L + FR D + +G +S D E ++ L E + + +ID D DG+G VDF+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 59
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 46 FRKLDLDNSGALSIDE 61
FR DLDN+G L +DE
Sbjct: 155 FRHCDLDNAGDLDVDE 170
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed
With Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed
With Calcium(Ii) Ion
Length = 222
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 26 ELNLSLNKIDADEIRRLGKRFRKLD--LDNSGALSIDEF---MSLPELQQNPLVQRVIDI 80
EL S+ +E+ L + F+KL + + G + +EF + ++N R+ D+
Sbjct: 23 ELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDV 82
Query: 81 FDEDGNGEVDF 91
FD NG ++F
Sbjct: 83 FDVKRNGVIEF 93
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.138 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,959,047
Number of Sequences: 62578
Number of extensions: 106631
Number of successful extensions: 679
Number of sequences better than 100.0: 197
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 441
Number of HSP's gapped (non-prelim): 349
length of query: 96
length of database: 14,973,337
effective HSP length: 62
effective length of query: 34
effective length of database: 11,093,501
effective search space: 377179034
effective search space used: 377179034
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)