BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11010
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27963|VMAT2_BOVIN Synaptic vesicular amine transporter OS=Bos taurus GN=SLC18A2 PE=1
SV=1
Length = 517
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 121/146 (82%)
Query: 85 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144
+ K L+ E VG++F SKA VQLL NP +G+LT+R+GY +PMFTGF IMF+ST++FA
Sbjct: 121 PSEDKDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFA 180
Query: 145 FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 204
F RTY L +ARSLQGIGSSCSSV+GMGMLA Y DD ERGNAMGIALGGLA+GVL+GPP
Sbjct: 181 FSRTYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPP 240
Query: 205 FGGIMYQFVGKTAPFLILSALALGDG 230
FG ++Y+FVGKTAPFL+L+AL L DG
Sbjct: 241 FGSVLYEFVGKTAPFLVLAALVLLDG 266
>sp|Q8BRU6|VMAT2_MOUSE Synaptic vesicular amine transporter OS=Mus musculus GN=Slc18a2
PE=1 SV=1
Length = 517
Score = 197 bits (502), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
Query: 80 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139
D E++ L+ E VG++F SKA VQLL NP +G+LT+R+GY +PMF GF IMF+S
Sbjct: 118 PDCPSEDKD--LLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAGFCIMFIS 175
Query: 140 TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 199
T++FAF +Y L +ARSLQGIGSSCSSV+GMGMLA Y DD ERGNAMGIALGGLA+GV
Sbjct: 176 TVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGV 235
Query: 200 LIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
L+GPPFG ++Y+FVGKTAPFL+L+AL L DG
Sbjct: 236 LVGPPFGSVLYEFVGKTAPFLVLAALVLLDG 266
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH 121
++I A ++ NM + +E + + +GV F + L+ + GIL H
Sbjct: 297 ILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGILAH 356
Query: 122 RVGYSLPMFTGFVIMFLSTLIFAFGRT-YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180
++G L G +++ +S L F + YG+ +A + G+G + V M Y
Sbjct: 357 KMGRWLCALLGMIVVGISILCIPFAKNIYGL--IAPNF-GVGFAIGMVDSSMMPIMGYLV 413
Query: 181 DRER----GNAMGIALGGLALGVLIGPPFGGIMYQFVG 214
D G+ IA +G IGP GG + + +G
Sbjct: 414 DLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIG 451
>sp|Q01827|VMAT2_RAT Synaptic vesicular amine transporter OS=Rattus norvegicus
GN=Slc18a2 PE=1 SV=2
Length = 515
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 120/154 (77%), Gaps = 2/154 (1%)
Query: 77 TTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136
T D E+R L+ E VG++F SKA VQLL NP +G+LT+R+GY +PMF GF IM
Sbjct: 113 TVPSDCPSEDRD--LLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAGFCIM 170
Query: 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLA 196
F+ST++FAF +Y L +ARSLQGIGSSCSSV+GMGMLA Y DD ERG MGIALGGLA
Sbjct: 171 FISTVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGKPMGIALGGLA 230
Query: 197 LGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
+GVL+GPPFG ++Y+FVGKTAPFL+L+AL L DG
Sbjct: 231 MGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDG 264
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH 121
++I A ++ NM + +E + + +GV F + L+ + GIL H
Sbjct: 295 ILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGILAH 354
Query: 122 RVGYSLPMFTGFVIMFLSTLIFAFGRT-YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180
++G L G VI+ +S L F + YG+ +A + G+G + V M Y
Sbjct: 355 KMGRWLCALLGMVIVGISILCIPFAKNIYGL--IAPNF-GVGFAIGMVDSSMMPIMGYLV 411
Query: 181 DRER----GNAMGIALGGLALGVLIGPPFGGIMYQFVG 214
D G+ IA +G IGP GG + + +G
Sbjct: 412 DLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIG 449
>sp|Q05940|VMAT2_HUMAN Synaptic vesicular amine transporter OS=Homo sapiens GN=SLC18A2
PE=1 SV=2
Length = 514
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 7/209 (3%)
Query: 26 SRVKTSGAGHRGHSSGSGQHVAHHCRKKS----RESRRLVLVIVAIALVLDNMLLTTVED 81
+ ++T+ H S S Q + + + +R L L A ++ N D
Sbjct: 58 TEIQTARPVHTASISDSFQSIFSYYDNSTMVTGNATRDLTLHQTATQHMVTNAS-AVPSD 116
Query: 82 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141
E++ L+ E VG++F SKA VQL+ NP +G+LT+R+GY +P+F GF IMF+ST+
Sbjct: 117 CPSEDKD--LLNENVQVGLLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFVSTI 174
Query: 142 IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI 201
+FAF +Y L +ARSLQGIGSSCSSV+GMGMLA Y DD ERGN MGIALGGLA+GVL+
Sbjct: 175 MFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNVMGIALGGLAMGVLV 234
Query: 202 GPPFGGIMYQFVGKTAPFLILSALALGDG 230
GPPFG ++Y+FVGKTAPFL+L+AL L DG
Sbjct: 235 GPPFGSVLYEFVGKTAPFLVLAALVLLDG 263
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH 121
++I A ++ NM + +E + + +GV F + L+ + GIL H
Sbjct: 294 ILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGILAH 353
Query: 122 RVGYSLPMFTGFVIMFLSTLIFAFGRT-YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180
++G L G +I+ +S L F + YG+ +A + G+G + V M Y
Sbjct: 354 KMGRWLCALLGMIIVGVSILCIPFAKNIYGL--IAPNF-GVGFAIGMVDSSMMPIMGYLV 410
Query: 181 DRER----GNAMGIALGGLALGVLIGPPFGGIMYQFVG 214
D G+ IA +G IGP GG + + +G
Sbjct: 411 DLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIG 448
>sp|Q08C75|VACHA_DANRE Probable vesicular acetylcholine transporter-A OS=Danio rerio
GN=slc18a3a PE=2 SV=1
Length = 513
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 138/245 (56%), Gaps = 27/245 (11%)
Query: 22 VAEMSRVKTSGAGHRGHSSGSGQHVAHHCRKKSRESRRLVLVIVAIALVLDNMLLTTVED 81
+A+ + VK S G R G+ + RR++LVIV +AL+LDNML +
Sbjct: 9 LAQTAAVKLSEMGERTKQLGNA-------IQDPERQRRIILVIVCVALLLDNMLYMVIVP 61
Query: 82 VA--------RENRHKYLMGETK-----------AVGVMFGSKAFVQLLANPLVGILTHR 122
+ E+ ++ G + +GV+F SKA +QLL NPL G R
Sbjct: 62 IVPDYLAHLESESEQAHVKGNSSINITQNENFDLQIGVLFASKAILQLLVNPLTGTFIDR 121
Query: 123 VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDR 182
VGY +P+ G IMF+ST IFAF Y LF+ARSLQG+GS+ + SG+ M+A++Y ++
Sbjct: 122 VGYDIPLLIGLSIMFVSTCIFAFAENYATLFMARSLQGLGSAFADTSGIAMIADKYAEES 181
Query: 183 ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSS 242
ER A+GIAL ++ G L PPFGG++Y+F GK PF+ L+ + L DG C T+++ S
Sbjct: 182 ERSRALGIALAFISFGSLAAPPFGGVLYEFAGKRFPFIALACVCLADGILC-LTVLKPFS 240
Query: 243 SHDRN 247
S R
Sbjct: 241 SRTRE 245
>sp|P81721|VACHT_TORCA Vesicular acetylcholine transporter OS=Torpedo californica PE=2
SV=2
Length = 515
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 32/211 (15%)
Query: 52 KKSRESRRLVLVIVAIALVLDNMLLTTVEDVA-------RENRHKYLM------------ 92
+ R R+++LVIV IA++LDNML + + R + Y+
Sbjct: 33 NEPRRKRKILLVIVCIAMLLDNMLYMVIVPIIPNYLETIRTYKLVYITTPSNGTNGSLLN 92
Query: 93 -------------GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139
E +GV+F SKA +QLL+NP G RVGY +P+ G IMF S
Sbjct: 93 STQRAVLERNPNANEDIQIGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFS 152
Query: 140 TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 199
T+ FAFG +Y VLF ARSLQG+GS+ + SG+ M+A++Y ++ ER A+GIAL ++ G
Sbjct: 153 TITFAFGESYAVLFAARSLQGLGSAFADTSGIAMIADKYTEESERTQALGIALAFISFGS 212
Query: 200 LIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
L+ PPFGG++YQF GK PFL+LS + L DG
Sbjct: 213 LVAPPFGGVLYQFAGKWVPFLVLSFVCLLDG 243
>sp|Q91498|VACHT_TORMA Vesicular acetylcholine transporter OS=Torpedo marmorata PE=2 SV=2
Length = 511
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 32/211 (15%)
Query: 52 KKSRESRRLVLVIVAIALVLDNMLLTTVEDVA-------RENRHKYLM------------ 92
+ R R+++LVIV IA++LDNML + + R + Y+
Sbjct: 29 NEPRRKRKILLVIVCIAMLLDNMLYMVIVPIIPNYLETIRTYKLVYITTPSNGTNGSLLN 88
Query: 93 -------------GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139
E +GV+F SKA +QLL+NP G RVGY +P+ G IMF S
Sbjct: 89 STQRAVLERNPNANEDIQIGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFS 148
Query: 140 TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 199
T+ FAFG +Y +LF ARSLQG+GS+ + SG+ M+A++Y ++ ER A+GIAL ++ G
Sbjct: 149 TITFAFGESYAILFAARSLQGLGSAFADTSGIAMIADKYTEESERTQALGIALAFISFGS 208
Query: 200 LIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
L+ PPFGG++YQF GK PFL+LS + L DG
Sbjct: 209 LVAPPFGGVLYQFAGKWVPFLVLSFVCLLDG 239
>sp|Q91514|VACHT_TORTO Vesicular acetylcholine transporter OS=Torpedo torpedo PE=2 SV=1
Length = 511
Score = 167 bits (422), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 32/205 (15%)
Query: 58 RRLVLVIVAIALVLDNMLLTTVEDVA-------RENRHKYLM------------------ 92
R+++LVIV IA++LDNML + + R + Y+
Sbjct: 35 RKILLVIVCIAMLLDNMLYMVIVPIVPNYLETIRTYKLVYITIPSNGTNGSLLNSTQRAV 94
Query: 93 -------GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145
E +GV+F SKA +QLL+NP G RVGY +P+ G IMF ST+ FAF
Sbjct: 95 LERNPNANEDIQIGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFSTITFAF 154
Query: 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 205
G +Y +LF ARSLQG+GS+ + SG+ M+A++Y ++ ER A+GIAL ++ G L+ PPF
Sbjct: 155 GESYAILFAARSLQGLGSAFADTSGIAMIADKYTEESERTQALGIALAFISFGSLVAPPF 214
Query: 206 GGIMYQFVGKTAPFLILSALALGDG 230
GG++YQF GK PFL+LS + L DG
Sbjct: 215 GGVLYQFAGKWVPFLVLSFVCLLDG 239
>sp|O17444|VACHT_DROME Vesicular acetylcholine transporter OS=Drosophila melanogaster
GN=VAChT PE=2 SV=2
Length = 578
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 26/198 (13%)
Query: 52 KKSRESRRLVLVIVAIALVLDNML----LTTVEDVARE---------------------- 85
++ RRL+LVIV+IAL+LDNML + + D RE
Sbjct: 25 QEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDDGPTPPPLRDNITGKII 84
Query: 86 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145
H G+ A G++F SKA VQL+ NP G L ++GY LPM G IMF ST +FA
Sbjct: 85 PVHHDHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFAC 144
Query: 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 205
G +Y VLF ARSLQG GS+ + +G+ M+A+R+ ++ ER A+GIAL ++ G L+ PPF
Sbjct: 145 GSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPF 204
Query: 206 GGIMYQFVGKTAPFLILS 223
GG +YQF GK PFLIL+
Sbjct: 205 GGALYQFAGKEVPFLILA 222
>sp|P59845|VACHB_DANRE Probable vesicular acetylcholine transporter-B OS=Danio rerio
GN=slc18a3b PE=2 SV=1
Length = 493
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 137/233 (58%), Gaps = 15/233 (6%)
Query: 22 VAEMSRVKTSGAGHRGHSSGSGQHVAHHCRKKSRESRRLVLVIVAIALVLDNMLLTTVED 81
+A+ + ++ S G R G R+ R+ RRL+LV+V +AL+LDNML +
Sbjct: 9 LAQSAVLQLSAMGERSRELGGA------LREPERK-RRLLLVVVCVALLLDNMLYMVIVP 61
Query: 82 VA-------RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134
+ R R +GV+F SKA +QLL NPL G RVGY LP+ G +
Sbjct: 62 IIPDYLADLRGERGNSSADLDIQIGVLFASKALLQLLVNPLSGTFIDRVGYDLPLLIGLL 121
Query: 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGG 194
+MFLST IFAF YG LF ARSLQG+GS+ + SG+ M+A+++ ++ ER A+GIAL
Sbjct: 122 VMFLSTCIFAFAENYGTLFAARSLQGLGSAFADTSGIAMIADKFTEEAERSRALGIALAF 181
Query: 195 LALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSSSHDRN 247
++ G L+ PPFGGI+Y+F GK PF++L+ + L DG T+V+ S R
Sbjct: 182 ISFGSLVAPPFGGILYEFAGKRVPFIVLACVCLADGVLL-LTVVKPFSDRTRE 233
>sp|Q16572|VACHT_HUMAN Vesicular acetylcholine transporter OS=Homo sapiens GN=SLC18A3 PE=1
SV=2
Length = 532
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 52/231 (22%)
Query: 52 KKSRESRRLVLVIVAIALVLDNMLLTTVEDVAREN------------------------- 86
++ R RRLVLVIV +AL+LDNML + + +
Sbjct: 26 QEPRRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGGEGPTRTPEVWEPTLPLP 85
Query: 87 --------------------------RHKYLM-GETKAVGVMFGSKAFVQLLANPLVGIL 119
R +Y E +GV+F SKA +QLL NPL G
Sbjct: 86 TPANASAYTANTSASPTAAWPAGSALRPRYPTESEDVKIGVLFASKAILQLLVNPLSGPF 145
Query: 120 THRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYP 179
R+ Y +P+ G +MF ST++FAF Y LF ARSLQG+GS+ + SG+ M+A++YP
Sbjct: 146 IDRMSYDVPLLIGLGVMFASTVLFAFAEDYATLFAARSLQGLGSAFADTSGIAMIADKYP 205
Query: 180 DDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
++ ER A+G+AL ++ G L+ PPFGGI+Y+F GK PFL+L+A++L D
Sbjct: 206 EEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVSLFDA 256
>sp|Q62666|VACHT_RAT Vesicular acetylcholine transporter OS=Rattus norvegicus GN=Slc18a3
PE=2 SV=2
Length = 530
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 52/231 (22%)
Query: 52 KKSRESRRLVLVIVAIALVLDNMLLTTVEDVARE-------------------------- 85
++ + RRLVLVIV +AL+LDNML + + +
Sbjct: 26 QEPQRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGSEGPTLVSEVWEPTLPPP 85
Query: 86 ---NRHKYLMG-----------------------ETKAVGVMFGSKAFVQLLANPLVGIL 119
N YL E +GV+F SKA +QLL NPL G
Sbjct: 86 TLANASAYLANTSASPTAAGSARSILRPRYPTESEDVKIGVLFASKAILQLLVNPLSGPF 145
Query: 120 THRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYP 179
R+ Y +P+ G +MF ST++FAF Y LF ARSLQG+GS+ + SG+ M+A++YP
Sbjct: 146 IDRMSYDVPLLIGLGVMFASTVMFAFAEDYATLFAARSLQGLGSAFADTSGIAMIADKYP 205
Query: 180 DDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
++ ER A+G+AL ++ G L+ PPFGGI+Y+F GK PFL+L+A++L D
Sbjct: 206 EEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVSLFDA 256
>sp|P34711|UNC17_CAEEL Vesicular acetylcholine transporter unc-17 OS=Caenorhabditis
elegans GN=unc-17 PE=2 SV=1
Length = 532
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 116/216 (53%), Gaps = 32/216 (14%)
Query: 47 AHHCRKKSRESRRLVLVIVAIALVLDNMLLTTVEDVARE---NRHKY------------- 90
A ++ ++ VLVIV+IAL+LDNML + + + + H Y
Sbjct: 19 AKKWLEQQDNQKKCVLVIVSIALLLDNMLYMVIVPIIPKYLRDIHNYQVTFEGYHNETSQ 78
Query: 91 ----------------LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134
+ E +G +F SKA +Q+ NP G + RVGY +PM G
Sbjct: 79 LANGTYLVREVGGRINFLDEELELGWLFASKALLQIFVNPFSGYIIDRVGYEIPMILGLC 138
Query: 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGG 194
MF ST IFA G++YGVL ARSLQG GS+ + SG+ M+A+R+ ++ ER A+GIAL
Sbjct: 139 TMFFSTAIFALGKSYGVLLFARSLQGFGSAFADTSGLAMIADRFTEENERSAALGIALAF 198
Query: 195 LALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
++ G L+ PPFG ++Y GK PFLILS + L D
Sbjct: 199 ISFGCLVAPPFGSVLYSLAGKPVPFLILSFVCLADA 234
>sp|O35304|VACHT_MOUSE Vesicular acetylcholine transporter OS=Mus musculus GN=Slc18a3 PE=2
SV=1
Length = 530
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 52/231 (22%)
Query: 52 KKSRESRRLVLVIVAIALVLDNMLLTTVEDVARE-------------------------- 85
++ + RRLVLVIV +AL+LDNML + + +
Sbjct: 26 QEPQRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGSESPTLISEVWEPTLPPP 85
Query: 86 ---NRHKYLMG-----------------------ETKAVGVMFGSKAFVQLLANPLVGIL 119
N YL E +GV+F SKA +QLL NPL G
Sbjct: 86 TLANASAYLANTSASPTAAGSARSILRPRYPTESEDVKIGVLFASKAILQLLVNPLSGPF 145
Query: 120 THRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYP 179
R+ Y +P+ G +MF ST++FAF Y F ARSLQG+GS+ + SG+ M+A++YP
Sbjct: 146 IDRMSYDVPLLIGLGVMFASTVMFAFAEDYATFFAARSLQGLGSAFADTSGIAMIADKYP 205
Query: 180 DDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230
++ ER A+G+AL ++ G L+ PPFGGI+Y+F GK PFL+L+A++L D
Sbjct: 206 EEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVSLFDA 256
>sp|P54219|VMAT1_HUMAN Chromaffin granule amine transporter OS=Homo sapiens GN=SLC18A1
PE=2 SV=1
Length = 525
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 119/152 (78%), Gaps = 1/152 (0%)
Query: 90 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY 149
+L E VGV+F SKA +QLL NP VG LT+R+GY +PMF GFVIMFLST++FAF TY
Sbjct: 131 FLEEEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTY 190
Query: 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 209
+LF+AR+LQGIGSS SSV+G+GMLA Y DD ERG AMG ALGGLALG+L+G PFG +M
Sbjct: 191 TLLFVARTLQGIGSSFSSVAGLGMLASVYTDDHERGRAMGTALGGLALGLLVGAPFGSVM 250
Query: 210 YQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241
Y+FVGK+APFLIL+ LAL DG I+Q S
Sbjct: 251 YEFVGKSAPFLILAFLALLDGA-LQLCILQPS 281
>sp|Q01818|VMAT1_RAT Chromaffin granule amine transporter OS=Rattus norvegicus
GN=Slc18a1 PE=2 SV=1
Length = 521
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 117/142 (82%)
Query: 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 148
++L E +G++F SKA +QLL NP VG LT+R+GY +PMF GF+IMFLSTL+FAF T
Sbjct: 127 EFLEEENVRIGILFASKALMQLLVNPFVGPLTNRIGYHIPMFVGFMIMFLSTLMFAFSGT 186
Query: 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208
Y +LF+AR+LQGIGSS SSV+G+GMLA Y D+ ERG AMGIALGGLALG+L+G PFG +
Sbjct: 187 YALLFVARTLQGIGSSFSSVAGLGMLASVYTDNYERGRAMGIALGGLALGLLVGAPFGSV 246
Query: 209 MYQFVGKTAPFLILSALALGDG 230
MY+FVGK++PFLIL+ LAL DG
Sbjct: 247 MYEFVGKSSPFLILAFLALLDG 268
>sp|Q8R090|VMAT1_MOUSE Chromaffin granule amine transporter OS=Mus musculus GN=Slc18a1
PE=2 SV=1
Length = 521
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 117/142 (82%)
Query: 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 148
++L E +G++F SKA +QLL NP VG LT+R+GY +PMF GF+IMFLSTL+FAF T
Sbjct: 127 EFLEEENVRIGILFASKALMQLLVNPFVGPLTNRIGYHIPMFVGFMIMFLSTLMFAFSGT 186
Query: 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208
Y +LF+AR+LQGIGSS SSV+G+GMLA Y D+ ERG AMGIALGGLALG+L+G PFG +
Sbjct: 187 YALLFVARTLQGIGSSFSSVAGLGMLASVYTDNYERGRAMGIALGGLALGLLVGAPFGSV 246
Query: 209 MYQFVGKTAPFLILSALALGDG 230
MY+FVGK++PFLIL+ LAL DG
Sbjct: 247 MYEFVGKSSPFLILAFLALLDG 268
>sp|O74852|YQ92_SCHPO Uncharacterized MFS-type transporter C18.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC18.02 PE=3 SV=1
Length = 448
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 53 KSRESRRLVLVIVAIALVLDNML---LTTVEDVARENRHKYLMGETKAV-GVMFGSKAFV 108
K R S ++ +AIAL D L +T + + +R ++V + A
Sbjct: 8 KQRRSLPFIIGTIAIALFTDLFLYGIITPILPFSLVDRVGISPDRVQSVISTLLAVYAVA 67
Query: 109 QLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS 167
+ A+ +G L + + +PM G + + +T + FG + +L +AR LQG+ ++
Sbjct: 68 NIAASSPIGFLADKFLTRKVPMLIGLIFLTSATALLTFGNSVPMLIVARVLQGLSAAVVW 127
Query: 168 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPF 219
G+ +L + D G+ MG G ++LG +I P FGGI+Y+ +G A F
Sbjct: 128 TVGLALLVDVVGAD-NVGSTMGGIFGFISLGEIIAPVFGGIVYESLGYYASF 178
>sp|P11545|MMR_STRCO Methylenomycin A resistance protein OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=mmr PE=3 SV=1
Length = 475
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 115 LVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML 174
L G L +R+G G + FL++L A T L AR +QG G++ S + +L
Sbjct: 80 LAGGLANRIGAKTVYLWGMGVFFLASLACALAPTAETLIAARLVQGAGAALFMPSSLSLL 139
Query: 175 AERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI-LSALALGDGCKC 233
+P+ R+R +G+ +A +GP GG+M G + FL+ L A+G
Sbjct: 140 VFSFPEKRQRTRMLGLWSAIVATSSGLGPTVGGLMVSAFGWESIFLLNLPIGAIGMAMTY 199
Query: 234 NYTIVQKS 241
Y +S
Sbjct: 200 RYIAATES 207
>sp|D3Z5L6|S18B1_MOUSE MFS-type transporter SLC18B1 OS=Mus musculus GN=Slc18b1 PE=2 SV=2
Length = 459
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 51 RKKSRE-SRRLVLVIVAIA-LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFV 108
R+ SR SR + V+V+ A + L M+ ++ + +G++FG A
Sbjct: 23 RETSRRLSREQIFVLVSAASMNLGCMMTYSILGPFFPKEAEKKGASNTMIGMIFGCYALF 82
Query: 109 QLLANPLVGILTHRVGYSLPMFTGFVIMFLS---TLIFAF------GRTY-GVLFLARSL 158
+LLA+ + G +G G MF+S T++F G + + FL R +
Sbjct: 83 ELLASLVFGKYLVHIGAKFMFIAG---MFVSGGVTILFGVLDQLPEGPIFIAMCFLVRIV 139
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP 218
IG + + +LA+ +P++ MG LG++ GPP GG++YQ G P
Sbjct: 140 DAIGFGAAITASSSILAKAFPNNV--ATVMGSLEVFSGLGLVAGPPLGGLLYQSFGYEVP 197
Query: 219 FLILSALAL 227
F+ L + L
Sbjct: 198 FIFLGCIVL 206
>sp|Q6NT16|S18B1_HUMAN MFS-type transporter SLC18B1 OS=Homo sapiens GN=SLC18B1 PE=2 SV=1
Length = 456
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 57 SRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
SR V V+++ A V L +M+ ++ + +G++FG A +LLA+ +
Sbjct: 30 SREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASLV 89
Query: 116 VGILTHRVGYSLPMFTGFVIMFLS---TLIFAF------GRTY-GVLFLARSLQGIGSSC 165
G +G G MF+S T++F G + + FL R + + +
Sbjct: 90 FGNYLVHIGAKFMFVAG---MFVSGGVTILFGVLDRVPDGPVFIAMCFLVRVMDAVSFAA 146
Query: 166 SSVSGMGMLAERYPDDRERGNAMGIALGGL----ALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + +LA+ +P N + LG L LG+++GPP GG +YQ G PF++
Sbjct: 147 AMTASSSILAKAFP------NNVATVLGSLETFSGLGLILGPPVGGFLYQSFGYEVPFIV 200
Query: 222 LSALAL 227
L + L
Sbjct: 201 LGCVVL 206
>sp|Q00538|MMR_BACSU Methylenomycin A resistance protein OS=Bacillus subtilis (strain
168) GN=mmr PE=3 SV=1
Length = 466
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLV--GI 118
VL+++A+ ++ + +T V + ++ M + GV + ++ A+ L+ G
Sbjct: 18 VLIVLALGFLMATLDVTVVNVAMADMKNTLSMSLS---GVTWVVDGYILTFASLLLAGGA 74
Query: 119 LTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178
L R G G + +++ + A +L R +QGIG++ S + +LA Y
Sbjct: 75 LADRFGSKTIYILGLAVFVMASCLCAASINGQMLIAGRLIQGIGAALFMPSSLSLLAASY 134
Query: 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
D+R R G+ ++ +GP GG++ Q G + FLI
Sbjct: 135 LDERARARMFGLWAALVSAASALGPFIGGVLVQLAGWQSIFLI 177
>sp|P39843|BMR2_BACSU Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168)
GN=blt PE=3 SV=1
Length = 400
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 90 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY 149
+L G T +G + + A QL+ +P G R G + G +I LS LIF G
Sbjct: 41 HLSGST--MGYLVAAFAISQLITSPFAGRWVDRFGRKKMIILGLLIFSLSELIFGLGTHV 98
Query: 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 209
+ + +R L G+ ++ + +A+ +ER AMG ++ G +IGP GG +
Sbjct: 99 SIFYFSRILGGVSAAFIMPAVTAYVAD-ITTLKERSKAMGYVSAAISTGFIIGPGAGGFI 157
Query: 210 YQFVGKTAPFLILSALALGDGCKCNYTIVQKSSSHDRN 247
F + PF SA+AL + + + S +R+
Sbjct: 158 AGFGIRM-PFFFASAIALIAAVTSVFILKESLSIEERH 194
>sp|O51798|MMLH_CUPPJ Probable 4-methylmuconolactone transporter OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=mmlH PE=3
SV=1
Length = 428
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 93 GETKA-VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGV 151
G TKA VGV+ V + GIL+ R G + + + L ++ F ++Y
Sbjct: 45 GLTKAEVGVLGTVALVVTAIGGWGAGILSDRYGRARILVLAIIWFTLFGVLAGFAQSYQQ 104
Query: 152 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG 198
L +AR+LQG+G G ++AE D R RG A+G G ALG
Sbjct: 105 LLIARTLQGLGFGGEWAVGAALMAEVI-DSRHRGKAIGFVQSGFALG 150
>sp|A8AEE4|MDTD_CITK8 Putative multidrug resistance protein MdtD OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtD
PE=3 SV=1
Length = 471
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L +VG FT V+ L +L A+ T L LAR LQG+G + G
Sbjct: 63 PASGWLADKVGVRNIFFTAIVLFTLGSLFCAWSSTLNELVLARVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GGI+ ++ FLI
Sbjct: 123 VMKIVPREQYMAAMTFVTLPG-QVGPLLGPALGGILVEYASWHWIFLI 169
>sp|B5XPB7|MDTD_KLEP3 Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae
(strain 342) GN=mdtD PE=3 SV=1
Length = 471
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
S R L IVA + + L TT+ + A + K L + ++ S + P
Sbjct: 6 ASVRWQLWIVAFGFFMQS-LDTTIVNTALPSMAKSLGESPLHMHMIIVSYVLTVAVMLPA 64
Query: 116 VGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175
G L RVG FT V+ +L A T L +AR LQGIG + G +
Sbjct: 65 SGWLADRVGVRNIFFTAIVLFTAGSLFCAQASTLDQLVMARVLQGIGGAMMVPVGRLTVM 124
Query: 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ P D+ + L G +G L+GP GG++ ++ FLI
Sbjct: 125 KIVPRDQYMAAMTFVTLPG-QVGPLLGPALGGVLVEYASWHWIFLI 169
>sp|A6TBH6|MDTD_KLEP7 Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=mdtD PE=3 SV=1
Length = 471
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
S R L IVA + + L TT+ + A + K L + ++ S + P
Sbjct: 6 ASVRWQLWIVAFGFFMQS-LDTTIVNTALPSMAKSLGESPLHMHMIIVSYVLTVAVMLPA 64
Query: 116 VGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175
G L RVG FT V+ +L A T L +AR LQG+G + G +
Sbjct: 65 SGWLADRVGVRNIFFTAIVLFTAGSLFCAQASTLDQLVMARVLQGVGGAMMVPVGRLTVM 124
Query: 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ P D+ + L G +G L+GP GG++ ++ FLI
Sbjct: 125 KIVPRDQYMAAMTFVTLPG-QVGPLLGPALGGVLVEYASWHWIFLI 169
>sp|Q668K2|NANT_YERPS Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=nanT PE=3 SV=1
Length = 510
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|A9QZJ2|NANT_YERPG Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=nanT PE=3 SV=1
Length = 510
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|B2K942|NANT_YERPB Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=nanT PE=3 SV=1
Length = 510
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|A7FG99|NANT_YERP3 Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=nanT PE=3 SV=1
Length = 510
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|A4TMJ0|NANT_YERPP Putative sialic acid transporter OS=Yersinia pestis (strain
Pestoides F) GN=nanT PE=3 SV=1
Length = 510
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana
GN=ANTR3 PE=2 SV=2
Length = 512
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 117 GILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL--ARSLQGIGSSCSSVSGMGML 174
G L R G + G + L+TL+ + + L L R+ G+ + S +L
Sbjct: 156 GALVDRYGGKRVLAWGVALWSLATLLTPWAAAHSTLALLCVRAFFGLAEGVAMPSMTTLL 215
Query: 175 AERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALAL 227
+ +P D ER +A+GI++ G +G ++G +M +G + PF++ ++L L
Sbjct: 216 SRWFPMD-ERASAVGISMAGFHMGNVVGLLLTPLMLSSIGISGPFILFASLGL 267
>sp|Q8Z5F5|MDTD_SALTI Putative multidrug resistance protein MdtD OS=Salmonella typhi
GN=mdtD PE=3 SV=1
Length = 470
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
++ R L IVA + + L TT+ + A + K L + ++ S + P
Sbjct: 6 DNTRWQLWIVAFGFFMQS-LDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPA 64
Query: 116 VGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175
G L ++G F V+ L +L A T L LAR LQG+G + G +
Sbjct: 65 SGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVM 124
Query: 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235
+ P + +AL G +G L+GP GG++ ++ FLI + + G +
Sbjct: 125 KIVPRAQYMAAMTFVALPG-QIGPLLGPALGGVLVEYASWHWIFLINIPVGI-VGAMATF 182
Query: 236 TIVQKSSSHDRNINLD 251
++ + R +L
Sbjct: 183 MLMPNYTIETRRFDLP 198
>sp|Q668C4|MDTD_YERPS Putative multidrug resistance protein MdtD OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=mdtD
PE=3 SV=1
Length = 465
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGDAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|A9N7L0|MDTD_SALPB Putative multidrug resistance protein MdtD OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=mdtD PE=3 SV=1
Length = 470
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
++ R L IVA+ + + L TT+ + A + K L + ++ S + P
Sbjct: 6 DNTRWQLWIVALGFFMQS-LDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPA 64
Query: 116 VGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175
G L ++G F V+ L +L A T L LAR LQG+G + G +
Sbjct: 65 SGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVM 124
Query: 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ P + + L G +G L+GP GG++ ++ FLI
Sbjct: 125 KIVPRAQYMAAMTFVTLPG-QIGPLLGPALGGVLVEYASWHWIFLI 169
>sp|P94574|YWOD_BACSU Uncharacterized MFS-type transporter YwoD OS=Bacillus subtilis
(strain 168) GN=ywoD PE=3 SV=1
Length = 452
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 54 SRESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLAN 113
S++SR + L VA +L+ + + + +H++ + T V + S +A
Sbjct: 3 SKKSRAVFLTAVASGTMLNPLNSSMISLALHSIQHEFHLSFTT-VSWLISSFYLASAVAQ 61
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P+ G L +G G +++ +S + F T+ L + R Q +GSS SG+G+
Sbjct: 62 PVTGKLGDLIGRKRLFLFGLILVAVSAIGAPFAPTFMTLLVMRLFQSVGSSAIYPSGVGL 121
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTA------PFLILSAL 225
+ + +R+ +++ A+ L GP GG + + G A PF+ILS L
Sbjct: 122 I-RNHIHERQASALAVLSIFASAMTAL-GPTAGGFLIVWGGWPAIFIVNLPFIILSFL 177
>sp|Q8ZCH3|NANT_YERPE Putative sialic acid transporter OS=Yersinia pestis GN=nanT PE=3
SV=1
Length = 510
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI 201
GIG + S + E +P + R A G + G ++G ++
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVL 172
>sp|Q1C5V2|NANT_YERPA Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=nanT PE=3 SV=1
Length = 510
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M T V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI 201
GIG + S + E +P + R A G + G ++G ++
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVL 172
>sp|B4T9U3|MDTD_SALHS Putative multidrug resistance protein MdtD OS=Salmonella heidelberg
(strain SL476) GN=mdtD PE=3 SV=1
Length = 470
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPL 115
++ R L IVA+ + + L TT+ + A + K L + ++ S + P
Sbjct: 6 DNTRWQLWIVALGFFMQS-LDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPA 64
Query: 116 VGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175
G L ++G F V+ L +L A T L LAR LQG+G + G +
Sbjct: 65 SGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVM 124
Query: 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ P + + L G +G L+GP GG++ ++ FLI
Sbjct: 125 KIVPRAQYMAAMTFVTLPG-QIGPLLGPALGGVLVEYASWHWIFLI 169
>sp|P23054|TCRB_BACSU Tetracycline resistance protein OS=Bacillus subtilis (strain 168)
GN=tetB PE=3 SV=1
Length = 458
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 49 HCRKKSRESRRLV-LVIVAIALVLDNMLL-TTVEDVARENRHKYLMGETKAVGVMFGSKA 106
+ + R ++ L+ L +++ VL+ M+L ++ D+A N L V F
Sbjct: 5 YSQSTLRHNQVLIWLCVLSFFSVLNEMVLNVSLPDIA--NEFNKLPASANWVNTAF---M 59
Query: 107 FVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY-GVLFLARSLQGIGSSC 165
+ L G L+ ++G + G ++ L ++I G ++ +L LAR +QGIG++
Sbjct: 60 LTFSIGTALYGKLSDQLGIKNLLLFGIMVNGLGSIIGFVGHSFFPILILARFIQGIGAAA 119
Query: 166 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSA 224
M ++A RY RG A G+ +A+G +GP GG++ ++ + LI +A
Sbjct: 120 FPALVMVVVA-RYIPKENRGKAFGLIGSLVAMGEGVGPAIGGMVAHYIHWSYLLLIPTA 177
>sp|B1JFW5|NANT_YERPY Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=nanT PE=3 SV=1
Length = 510
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 14/184 (7%)
Query: 40 SGSGQHVAHHCRKKSRESRRLVLVIVAIALV-LDNMLLTTVEDVARENRHKYLMGETKAV 98
SG + + + + + V + AL D +L+T V ++ L+ T +
Sbjct: 15 SGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLI 74
Query: 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158
F S+ F L+ +G + R G L M V+ TL Y LF+AR +
Sbjct: 75 SAAFISRWFGGLV----LGAMGDRYGRKLAMIISIVLFSFGTLACGLAPGYTTLFIARLI 130
Query: 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG--------PPFGGIMY 210
GIG + S + E +P + R A G + G ++G ++ P FG M
Sbjct: 131 IGIGMAGEYGSSSTYVMESWPKNM-RNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRML 189
Query: 211 QFVG 214
++G
Sbjct: 190 FYIG 193
>sp|B1JSD2|MDTD_YERPY Putative multidrug resistance protein MdtD OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtD
PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|A4TMR4|MDTD_YERPP Putative multidrug resistance protein MdtD OS=Yersinia pestis
(strain Pestoides F) GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|Q1CK62|MDTD_YERPN Putative multidrug resistance protein MdtD OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|A9QZU7|MDTD_YERPG Putative multidrug resistance protein MdtD OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|Q7CJL1|MDTD_YERPE Putative multidrug resistance protein MdtD OS=Yersinia pestis
GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|B2K9M2|MDTD_YERPB Putative multidrug resistance protein MdtD OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=mdtD
PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|Q1C5L8|MDTD_YERPA Putative multidrug resistance protein MdtD OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
>sp|A7FG15|MDTD_YERP3 Putative multidrug resistance protein MdtD OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=mdtD PE=3 SV=1
Length = 465
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 114 PLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 173
P G L R+G F+ ++ +L+ A T L L+R LQG+G + G
Sbjct: 63 PASGWLADRIGVKWVFFSAIILFTFGSLMCAQSATLNELILSRVLQGVGGAMMVPVGRLT 122
Query: 174 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221
+ + P ++ + L G +G L+GP GG + +F FLI
Sbjct: 123 VMKIVPREQYMAAMAFVTLPG-QIGPLVGPALGGFLVEFASWHWIFLI 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,230,201
Number of Sequences: 539616
Number of extensions: 3812759
Number of successful extensions: 12877
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 12382
Number of HSP's gapped (non-prelim): 709
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)