Query psy11010
Match_columns 256
No_of_seqs 291 out of 1461
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 15:54:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11010.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11010hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 99.9 1.1E-25 2.4E-30 184.5 20.2 182 55-238 8-189 (394)
2 PRK14995 methyl viologen resis 99.9 1.6E-24 3.4E-29 187.9 20.9 183 58-242 4-187 (495)
3 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.6E-24 3.5E-29 183.8 19.9 184 56-241 4-193 (412)
4 PRK03545 putative arabinose tr 99.9 3.8E-24 8.2E-29 180.4 20.1 182 57-240 6-187 (390)
5 PRK10213 nepI ribonucleoside t 99.9 1.2E-23 2.7E-28 177.4 21.7 181 57-239 17-197 (394)
6 KOG1330|consensus 99.9 1.6E-25 3.4E-30 183.6 9.6 186 55-242 28-214 (493)
7 PF07690 MFS_1: Major Facilita 99.9 3E-23 6.5E-28 172.0 18.0 173 66-239 2-174 (352)
8 PRK11663 regulatory protein Uh 99.9 3.7E-23 8E-28 176.7 18.6 180 58-239 21-200 (434)
9 PRK15403 multidrug efflux syst 99.9 1.6E-22 3.5E-27 171.6 20.9 174 66-241 22-195 (413)
10 TIGR00891 2A0112 putative sial 99.9 1E-22 2.2E-27 172.0 19.7 182 55-239 7-190 (405)
11 TIGR00903 2A0129 major facilit 99.9 7.4E-23 1.6E-27 170.8 18.3 167 73-242 4-170 (368)
12 TIGR00710 efflux_Bcr_CflA drug 99.9 1.6E-22 3.4E-27 169.9 20.3 179 61-241 6-184 (385)
13 PRK11551 putative 3-hydroxyphe 99.9 1.2E-22 2.7E-27 172.0 19.7 184 56-241 11-194 (406)
14 TIGR00711 efflux_EmrB drug res 99.9 6.1E-23 1.3E-27 177.6 18.1 178 61-240 3-180 (485)
15 TIGR01299 synapt_SV2 synaptic 99.9 1.2E-22 2.6E-27 181.0 19.3 184 56-242 163-359 (742)
16 PRK10091 MFS transport protein 99.9 1.8E-22 3.9E-27 169.7 19.4 178 61-240 4-181 (382)
17 PRK05122 major facilitator sup 99.9 1.3E-22 2.7E-27 171.6 18.4 172 57-229 12-191 (399)
18 PRK12382 putative transporter; 99.9 3.9E-22 8.4E-27 168.3 19.6 168 60-228 15-190 (392)
19 PRK15402 multidrug efflux syst 99.9 5.6E-22 1.2E-26 168.0 19.7 184 56-241 9-192 (406)
20 COG2271 UhpC Sugar phosphate p 99.9 5.6E-23 1.2E-27 167.2 12.3 186 55-242 24-211 (448)
21 PRK10504 putative transporter; 99.9 8.3E-22 1.8E-26 170.1 20.3 178 60-239 10-187 (471)
22 PRK10054 putative transporter; 99.9 9.2E-22 2E-26 166.1 19.5 175 62-238 9-183 (395)
23 PRK11652 emrD multidrug resist 99.9 1.3E-21 2.9E-26 165.1 20.0 182 58-241 6-187 (394)
24 PRK12307 putative sialic acid 99.9 8.7E-22 1.9E-26 167.8 18.6 170 56-227 14-183 (426)
25 PRK09556 uhpT sugar phosphate 99.9 1E-22 2.2E-27 175.6 12.7 180 58-239 27-214 (467)
26 PRK03699 putative transporter; 99.9 2.5E-21 5.5E-26 163.5 20.8 177 57-235 4-181 (394)
27 PLN00028 nitrate transmembrane 99.9 3.2E-21 6.9E-26 166.5 21.8 179 58-239 34-221 (476)
28 PRK11646 multidrug resistance 99.9 1.5E-21 3.2E-26 165.1 19.3 174 64-239 14-187 (400)
29 TIGR00900 2A0121 H+ Antiporter 99.9 9.8E-22 2.1E-26 163.6 17.9 169 66-236 5-178 (365)
30 PRK10207 dipeptide/tripeptide 99.9 1.7E-21 3.6E-26 168.2 19.9 171 57-228 11-185 (489)
31 KOG3764|consensus 99.9 4.1E-23 8.8E-28 166.3 8.7 152 92-243 102-253 (464)
32 PRK10406 alpha-ketoglutarate t 99.9 2.3E-21 5E-26 165.6 19.9 171 57-229 19-211 (432)
33 TIGR00893 2A0114 d-galactonate 99.9 6.4E-22 1.4E-26 166.1 16.3 167 73-241 7-173 (399)
34 PRK10077 xylE D-xylose transpo 99.9 1.4E-21 3E-26 169.0 18.3 183 56-241 8-218 (479)
35 TIGR00890 2A0111 Oxalate/Forma 99.9 9.3E-22 2E-26 164.3 16.4 161 76-239 19-179 (377)
36 TIGR00886 2A0108 nitrite extru 99.9 2.9E-21 6.2E-26 161.3 18.8 174 64-239 5-190 (366)
37 PRK03893 putative sialic acid 99.9 5.8E-21 1.3E-25 165.9 20.7 171 56-228 16-186 (496)
38 PRK10473 multidrug efflux syst 99.9 6.7E-21 1.5E-25 160.7 20.4 177 63-241 6-182 (392)
39 TIGR00924 yjdL_sub1_fam amino 99.9 4.8E-21 1E-25 165.1 19.4 173 60-233 10-188 (475)
40 PRK09705 cynX putative cyanate 99.9 6.2E-21 1.3E-25 161.0 19.6 168 59-230 9-177 (393)
41 PRK11043 putative transporter; 99.9 1E-20 2.2E-25 160.1 20.3 168 69-238 15-182 (401)
42 TIGR00892 2A0113 monocarboxyla 99.9 8.8E-21 1.9E-25 162.9 19.8 179 56-237 15-194 (455)
43 TIGR00894 2A0114euk Na(+)-depe 99.9 2.8E-21 6.1E-26 166.5 16.7 185 55-241 14-223 (465)
44 TIGR00895 2A0115 benzoate tran 99.9 2.3E-21 4.9E-26 163.2 15.7 181 57-239 14-194 (398)
45 PRK15034 nitrate/nitrite trans 99.9 1.2E-20 2.6E-25 159.7 19.7 181 58-240 32-235 (462)
46 TIGR00899 2A0120 sugar efflux 99.9 9.6E-21 2.1E-25 158.6 19.0 174 67-241 4-180 (375)
47 TIGR00879 SP MFS transporter, 99.9 2.9E-21 6.4E-26 166.1 16.0 175 63-240 31-219 (481)
48 PRK09874 drug efflux system pr 99.9 2.4E-20 5.2E-25 158.0 20.7 177 61-240 15-196 (408)
49 PRK11102 bicyclomycin/multidru 99.9 9.9E-21 2.2E-25 158.7 17.9 164 75-240 6-169 (377)
50 PRK10642 proline/glycine betai 99.9 2.6E-20 5.7E-25 161.5 20.4 179 59-240 15-215 (490)
51 PRK09952 shikimate transporter 99.9 2.3E-20 5.1E-25 159.6 19.7 170 57-228 19-211 (438)
52 TIGR00881 2A0104 phosphoglycer 99.9 2.6E-21 5.7E-26 161.7 13.4 168 71-240 6-174 (379)
53 PRK11273 glpT sn-glycerol-3-ph 99.9 2.3E-20 5E-25 160.3 18.1 181 57-240 26-211 (452)
54 TIGR00887 2A0109 phosphate:H+ 99.9 3.2E-20 7E-25 161.4 18.9 186 55-242 11-229 (502)
55 TIGR00806 rfc RFC reduced fola 99.9 5.8E-20 1.2E-24 153.6 19.4 143 75-220 40-183 (511)
56 PRK09584 tppB putative tripept 99.9 8.3E-20 1.8E-24 158.3 20.1 171 60-230 21-194 (500)
57 PRK15075 citrate-proton sympor 99.9 7.9E-20 1.7E-24 156.3 19.2 167 57-225 12-200 (434)
58 PRK10133 L-fucose transporter; 99.8 2.6E-19 5.5E-24 153.0 21.5 151 58-210 24-177 (438)
59 PRK11195 lysophospholipid tran 99.8 1E-19 2.2E-24 153.6 18.3 170 64-240 7-176 (393)
60 PRK03633 putative MFS family t 99.8 1.7E-19 3.7E-24 151.7 19.5 154 61-216 7-160 (381)
61 TIGR00885 fucP L-fucose:H+ sym 99.8 2.5E-19 5.5E-24 151.8 19.7 171 62-234 5-204 (410)
62 TIGR00897 2A0118 polyol permea 99.8 3.4E-19 7.3E-24 150.9 19.5 177 60-238 13-194 (402)
63 TIGR00712 glpT glycerol-3-phos 99.8 2E-19 4.3E-24 153.9 17.5 180 58-240 25-209 (438)
64 cd06174 MFS The Major Facilita 99.8 3.5E-19 7.6E-24 147.2 17.9 168 65-234 4-171 (352)
65 PRK15011 sugar efflux transpor 99.8 1E-18 2.2E-23 147.5 20.9 177 64-241 19-198 (393)
66 PRK10489 enterobactin exporter 99.8 9.3E-20 2E-24 155.0 13.8 165 69-235 26-195 (417)
67 PRK15462 dipeptide/tripeptide 99.8 8.1E-19 1.8E-23 150.1 19.5 174 59-233 8-185 (493)
68 PF06609 TRI12: Fungal trichot 99.8 3.2E-19 6.9E-24 154.3 17.0 153 85-240 68-220 (599)
69 KOG2532|consensus 99.8 1E-19 2.2E-24 154.9 13.3 154 89-243 66-222 (466)
70 TIGR00805 oat sodium-independe 99.8 1.8E-19 4E-24 159.7 13.8 168 68-237 41-281 (633)
71 TIGR00898 2A0119 cation transp 99.8 3.2E-19 6.9E-24 155.3 13.6 150 87-241 115-267 (505)
72 KOG2533|consensus 99.8 7.8E-19 1.7E-23 150.0 14.2 182 60-242 45-232 (495)
73 PTZ00207 hypothetical protein; 99.8 1.5E-17 3.3E-22 144.6 21.9 179 56-241 24-209 (591)
74 KOG0254|consensus 99.8 4.9E-18 1.1E-22 148.1 17.1 144 97-242 90-234 (513)
75 TIGR00896 CynX cyanate transpo 99.8 4.8E-18 1E-22 141.5 16.3 149 77-229 17-167 (355)
76 KOG2615|consensus 99.8 2E-18 4.4E-23 138.7 12.8 121 89-211 61-181 (451)
77 COG2223 NarK Nitrate/nitrite t 99.8 3.1E-18 6.7E-23 139.7 14.0 183 56-242 10-198 (417)
78 PRK15011 sugar efflux transpor 99.8 3.2E-17 6.9E-22 138.5 20.7 156 79-236 235-390 (393)
79 TIGR00889 2A0110 nucleoside tr 99.8 1.2E-17 2.6E-22 142.0 17.6 145 96-241 251-406 (418)
80 TIGR00880 2_A_01_02 Multidrug 99.8 6.1E-18 1.3E-22 121.5 11.3 136 102-238 4-139 (141)
81 TIGR00890 2A0111 Oxalate/Forma 99.8 3E-17 6.4E-22 137.1 16.8 148 81-230 226-375 (377)
82 PRK09528 lacY galactoside perm 99.8 1E-17 2.3E-22 142.6 13.1 149 92-241 258-407 (420)
83 PRK10489 enterobactin exporter 99.8 8.3E-17 1.8E-21 136.9 18.4 169 79-248 242-410 (417)
84 PRK06814 acylglycerophosphoeth 99.8 6.3E-17 1.4E-21 153.5 19.1 142 96-239 52-196 (1140)
85 TIGR00882 2A0105 oligosacchari 99.8 7.1E-17 1.5E-21 136.5 17.4 174 62-239 4-185 (396)
86 KOG0255|consensus 99.8 1.6E-17 3.4E-22 145.3 13.7 148 89-241 111-258 (521)
87 TIGR00899 2A0120 sugar efflux 99.8 2.6E-16 5.7E-21 131.7 20.5 153 81-235 220-372 (375)
88 PRK05122 major facilitator sup 99.8 2.7E-16 5.8E-21 133.0 20.7 156 79-238 235-390 (399)
89 TIGR00902 2A0127 phenyl propri 99.7 2.7E-16 5.8E-21 132.3 20.3 167 62-232 207-374 (382)
90 PRK08633 2-acyl-glycerophospho 99.7 1E-16 2.3E-21 152.1 19.8 148 64-212 13-165 (1146)
91 PRK10642 proline/glycine betai 99.7 2.9E-16 6.2E-21 136.3 20.8 170 71-242 261-434 (490)
92 TIGR00883 2A0106 metabolite-pr 99.7 5.5E-17 1.2E-21 136.3 15.9 160 72-232 5-186 (394)
93 PRK09556 uhpT sugar phosphate 99.7 1.1E-16 2.4E-21 138.2 17.9 174 61-235 259-447 (467)
94 TIGR00902 2A0127 phenyl propri 99.7 1.5E-16 3.3E-21 133.8 17.9 159 65-227 9-169 (382)
95 PRK03699 putative transporter; 99.7 2.1E-16 4.5E-21 133.6 18.8 167 66-234 211-377 (394)
96 PRK11902 ampG muropeptide tran 99.7 2.4E-16 5.2E-21 133.5 19.2 170 65-239 4-183 (402)
97 PRK11010 ampG muropeptide tran 99.7 2.7E-16 5.9E-21 136.3 19.8 174 62-240 14-197 (491)
98 PRK09874 drug efflux system pr 99.7 9.7E-17 2.1E-21 136.0 16.6 161 77-238 236-399 (408)
99 cd06174 MFS The Major Facilita 99.7 3.1E-16 6.7E-21 129.6 18.8 164 70-234 185-349 (352)
100 TIGR00893 2A0114 d-galactonate 99.7 2.2E-16 4.7E-21 132.5 18.1 172 61-234 216-396 (399)
101 PRK11551 putative 3-hydroxyphe 99.7 1.8E-16 3.8E-21 134.4 17.5 157 78-236 238-395 (406)
102 PRK09528 lacY galactoside perm 99.7 1.8E-16 3.9E-21 135.1 17.3 175 62-240 12-194 (420)
103 PRK03545 putative arabinose tr 99.7 5.7E-16 1.2E-20 130.7 19.8 156 81-238 226-381 (390)
104 KOG2504|consensus 99.7 1.4E-16 3E-21 137.3 16.0 181 55-238 41-222 (509)
105 PRK12382 putative transporter; 99.7 6.5E-16 1.4E-20 130.4 19.5 155 79-237 235-389 (392)
106 PRK09705 cynX putative cyanate 99.7 1.7E-15 3.7E-20 128.0 21.7 169 71-242 216-386 (393)
107 TIGR00901 2A0125 AmpG-related 99.7 3.2E-16 6.9E-21 130.6 16.9 157 79-239 7-180 (356)
108 PRK11128 putative 3-phenylprop 99.7 4E-16 8.7E-21 131.3 17.2 154 72-231 16-173 (382)
109 PRK03633 putative MFS family t 99.7 1.9E-15 4.2E-20 127.1 20.7 150 81-235 221-370 (381)
110 TIGR01299 synapt_SV2 synaptic 99.7 1.1E-15 2.5E-20 136.7 20.2 139 99-240 598-736 (742)
111 PRK11273 glpT sn-glycerol-3-ph 99.7 8.4E-16 1.8E-20 132.1 17.7 181 62-243 255-441 (452)
112 TIGR00883 2A0106 metabolite-pr 99.7 3.2E-16 6.9E-21 131.7 14.6 165 62-227 221-391 (394)
113 COG3104 PTR2 Dipeptide/tripept 99.7 4.8E-16 1E-20 129.7 14.1 180 58-237 19-206 (498)
114 TIGR00891 2A0112 putative sial 99.7 1.1E-15 2.4E-20 129.1 16.3 147 74-221 252-400 (405)
115 PF11700 ATG22: Vacuole efflux 99.7 5.6E-15 1.2E-19 126.7 19.7 178 57-235 278-466 (477)
116 PRK11663 regulatory protein Uh 99.7 3.4E-15 7.3E-20 127.8 18.1 176 62-239 245-426 (434)
117 PF05977 MFS_3: Transmembrane 99.7 4.7E-15 1E-19 128.5 19.0 177 60-238 10-191 (524)
118 TIGR01301 GPH_sucrose GPH fami 99.7 7.3E-15 1.6E-19 125.4 19.3 180 61-242 5-223 (477)
119 COG0738 FucP Fucose permease [ 99.7 9.3E-15 2E-19 118.9 18.8 167 69-237 22-210 (422)
120 PRK03893 putative sialic acid 99.7 2.8E-15 6E-20 130.4 17.0 148 80-228 295-444 (496)
121 PF05977 MFS_3: Transmembrane 99.7 5.8E-15 1.3E-19 127.9 18.6 161 74-235 232-392 (524)
122 PRK09952 shikimate transporter 99.7 8E-15 1.7E-19 125.6 19.4 162 73-235 263-431 (438)
123 TIGR00879 SP MFS transporter, 99.7 7.3E-15 1.6E-19 126.4 18.6 158 82-241 306-474 (481)
124 PRK11128 putative 3-phenylprop 99.7 1.8E-14 3.8E-19 121.3 19.9 153 76-232 221-374 (382)
125 COG2271 UhpC Sugar phosphate p 99.7 1.6E-15 3.4E-20 124.1 12.8 181 58-239 250-436 (448)
126 TIGR00897 2A0118 polyol permea 99.7 1.4E-14 3.1E-19 122.7 19.1 166 67-236 229-400 (402)
127 PRK10504 putative transporter; 99.7 1.3E-14 2.7E-19 125.5 18.9 146 69-215 270-418 (471)
128 TIGR00792 gph sugar (Glycoside 99.7 3.7E-15 8.1E-20 127.5 15.5 171 71-241 10-198 (437)
129 COG2814 AraJ Arabinose efflux 99.6 2.6E-14 5.7E-19 117.8 18.8 172 64-238 215-387 (394)
130 PF00083 Sugar_tr: Sugar (and 99.6 3.7E-18 7.9E-23 146.6 -5.0 145 96-242 46-196 (451)
131 PRK15075 citrate-proton sympor 99.6 2.8E-14 6.1E-19 122.1 18.5 144 72-216 250-398 (434)
132 TIGR00882 2A0105 oligosacchari 99.6 1.5E-14 3.2E-19 122.3 16.4 152 83-235 238-393 (396)
133 TIGR00892 2A0113 monocarboxyla 99.6 5.6E-15 1.2E-19 127.1 13.5 167 63-231 244-415 (455)
134 TIGR00900 2A0121 H+ Antiporter 99.6 1.4E-14 3E-19 120.6 15.1 133 81-214 232-365 (365)
135 TIGR00712 glpT glycerol-3-phos 99.6 1.5E-14 3.2E-19 124.0 15.2 164 77-241 268-437 (438)
136 COG2223 NarK Nitrate/nitrite t 99.6 1.9E-14 4.2E-19 117.7 14.6 179 56-239 217-403 (417)
137 KOG0252|consensus 99.6 1.7E-15 3.7E-20 124.8 8.4 185 55-241 36-249 (538)
138 TIGR00895 2A0115 benzoate tran 99.6 4E-14 8.6E-19 119.2 17.0 138 70-209 260-397 (398)
139 TIGR00889 2A0110 nucleoside tr 99.6 5.6E-14 1.2E-18 119.6 17.5 167 65-240 7-182 (418)
140 PRK12307 putative sialic acid 99.6 4.6E-14 1E-18 120.4 16.6 139 80-220 251-391 (426)
141 TIGR01272 gluP glucose/galacto 99.6 2E-13 4.4E-18 111.5 19.4 161 61-225 141-303 (310)
142 TIGR00792 gph sugar (Glycoside 99.6 2.8E-14 6.1E-19 122.1 14.9 149 65-215 227-383 (437)
143 TIGR02718 sider_RhtX_FptX side 99.6 1.1E-13 2.3E-18 116.9 18.0 152 80-232 228-386 (390)
144 PRK10077 xylE D-xylose transpo 99.6 8.6E-14 1.9E-18 120.5 17.8 158 83-242 294-462 (479)
145 PRK11010 ampG muropeptide tran 99.6 1.7E-13 3.6E-18 119.0 19.3 155 81-236 243-402 (491)
146 TIGR00881 2A0104 phosphoglycer 99.6 2.8E-14 6.1E-19 119.2 14.0 157 62-219 218-379 (379)
147 KOG2325|consensus 99.6 1.2E-13 2.6E-18 116.5 17.4 187 54-242 28-234 (488)
148 KOG0569|consensus 99.6 1.3E-13 2.7E-18 117.0 17.6 143 98-242 62-209 (485)
149 TIGR02332 HpaX 4-hydroxyphenyl 99.6 6.6E-14 1.4E-18 119.0 16.1 163 63-226 245-410 (412)
150 TIGR00887 2A0109 phosphate:H+ 99.6 1.4E-13 3.1E-18 119.9 18.5 138 103-242 342-493 (502)
151 PRK15402 multidrug efflux syst 99.6 1.5E-13 3.2E-18 116.6 18.1 158 80-239 235-397 (406)
152 PF03825 Nuc_H_symport: Nucleo 99.6 2.5E-13 5.4E-18 114.4 19.1 172 66-239 213-397 (400)
153 PRK10406 alpha-ketoglutarate t 99.6 2.1E-13 4.6E-18 116.6 19.0 160 74-235 257-422 (432)
154 PRK10054 putative transporter; 99.6 6.5E-14 1.4E-18 118.4 15.6 149 90-240 238-387 (395)
155 PRK10091 MFS transport protein 99.6 2E-13 4.4E-18 114.9 18.5 153 81-236 220-375 (382)
156 COG2807 CynX Cyanate permease 99.6 3.2E-13 6.9E-18 108.6 18.4 174 59-236 11-185 (395)
157 TIGR02718 sider_RhtX_FptX side 99.6 3.3E-13 7.1E-18 113.9 18.9 176 62-239 3-186 (390)
158 PLN00028 nitrate transmembrane 99.6 1.3E-13 2.7E-18 119.4 15.9 156 79-237 271-433 (476)
159 KOG0253|consensus 99.6 8E-14 1.7E-18 112.1 13.3 184 54-242 72-255 (528)
160 PRK11902 ampG muropeptide tran 99.6 3E-13 6.4E-18 114.7 17.5 149 84-237 233-390 (402)
161 PRK10213 nepI ribonucleoside t 99.6 1E-12 2.2E-17 111.1 20.3 149 82-232 238-386 (394)
162 COG2270 Permeases of the major 99.5 2.2E-13 4.8E-18 111.7 15.0 172 61-233 253-425 (438)
163 PF01306 LacY_symp: LacY proto 99.5 4.6E-13 1E-17 111.5 16.5 151 92-243 255-406 (412)
164 TIGR00894 2A0114euk Na(+)-depe 99.5 3.5E-13 7.6E-18 116.3 16.0 177 59-237 260-450 (465)
165 TIGR00896 CynX cyanate transpo 99.5 1.6E-12 3.5E-17 108.3 18.3 139 74-214 211-350 (355)
166 PRK09669 putative symporter Ya 99.5 8E-13 1.7E-17 113.5 16.6 176 65-240 14-207 (444)
167 PRK08633 2-acyl-glycerophospho 99.5 9E-13 2E-17 125.4 18.0 151 77-228 249-401 (1146)
168 TIGR00711 efflux_EmrB drug res 99.5 8.8E-13 1.9E-17 114.3 16.3 144 69-213 264-411 (485)
169 TIGR00898 2A0119 cation transp 99.5 9.1E-13 2E-17 114.9 16.4 138 100-241 359-498 (505)
170 PRK11646 multidrug resistance 99.5 1.2E-12 2.7E-17 110.8 16.2 150 81-232 229-383 (400)
171 PRK10133 L-fucose transporter; 99.5 2.6E-12 5.7E-17 110.0 18.0 146 82-231 280-427 (438)
172 PRK06814 acylglycerophosphoeth 99.5 8E-13 1.7E-17 125.7 16.2 165 65-230 230-415 (1140)
173 PRK14995 methyl viologen resis 99.5 1.2E-12 2.6E-17 113.9 16.0 144 67-211 266-412 (495)
174 KOG0569|consensus 99.5 2E-12 4.3E-17 109.8 15.6 160 82-243 291-460 (485)
175 TIGR00710 efflux_Bcr_CflA drug 99.5 5.1E-12 1.1E-16 106.2 17.8 138 79-219 225-368 (385)
176 PRK10473 multidrug efflux syst 99.5 6.5E-12 1.4E-16 106.1 18.5 138 81-224 224-361 (392)
177 PRK11195 lysophospholipid tran 99.5 6.1E-12 1.3E-16 106.4 18.2 153 81-236 226-379 (393)
178 PRK15034 nitrate/nitrite trans 99.5 4.9E-12 1.1E-16 107.6 17.3 178 59-241 254-458 (462)
179 TIGR00788 fbt folate/biopterin 99.5 6.3E-12 1.4E-16 108.5 17.5 178 59-240 25-211 (468)
180 PRK09848 glucuronide transport 99.5 2.8E-12 6.1E-17 110.3 15.1 151 65-215 233-391 (448)
181 KOG2504|consensus 99.4 2.2E-12 4.9E-17 111.4 13.5 175 60-236 298-475 (509)
182 KOG4686|consensus 99.4 1.4E-11 3E-16 96.2 16.4 176 57-239 264-444 (459)
183 PF13347 MFS_2: MFS/sugar tran 99.4 2E-11 4.2E-16 104.4 17.6 153 62-215 227-387 (428)
184 PRK10429 melibiose:sodium symp 99.4 1.8E-11 3.9E-16 106.0 17.4 176 65-240 11-204 (473)
185 PF05631 DUF791: Protein of un 99.4 6.8E-11 1.5E-15 95.8 19.1 151 89-241 62-220 (354)
186 PF07690 MFS_1: Major Facilita 99.4 6.2E-12 1.3E-16 104.2 13.6 128 75-203 221-352 (352)
187 PF13347 MFS_2: MFS/sugar tran 99.4 3.3E-12 7.1E-17 109.2 11.9 167 73-239 14-200 (428)
188 TIGR00903 2A0129 major facilit 99.4 2.7E-11 5.8E-16 101.5 16.9 165 62-234 194-362 (368)
189 PRK11462 putative transporter; 99.4 3.8E-11 8.3E-16 103.5 18.3 177 64-240 13-207 (460)
190 COG2807 CynX Cyanate permease 99.4 6.1E-11 1.3E-15 95.7 18.0 168 69-238 217-386 (395)
191 KOG0253|consensus 99.4 8.2E-12 1.8E-16 100.8 12.8 134 105-241 390-523 (528)
192 PF06813 Nodulin-like: Nodulin 99.4 4.9E-11 1.1E-15 93.4 16.6 175 58-237 1-182 (250)
193 PF01306 LacY_symp: LacY proto 99.4 2.5E-11 5.4E-16 101.3 15.2 174 62-239 9-190 (412)
194 TIGR00901 2A0125 AmpG-related 99.4 2.1E-11 4.5E-16 101.6 14.8 126 69-196 218-355 (356)
195 PRK11102 bicyclomycin/multidru 99.4 8.1E-11 1.8E-15 98.7 18.0 132 75-208 209-345 (377)
196 TIGR00924 yjdL_sub1_fam amino 99.4 7.3E-11 1.6E-15 102.1 17.6 177 61-238 273-469 (475)
197 PRK11043 putative transporter; 99.3 1.8E-10 4E-15 97.5 18.5 136 81-219 224-364 (401)
198 PRK10429 melibiose:sodium symp 99.3 6.3E-11 1.4E-15 102.6 15.3 151 64-215 235-396 (473)
199 PRK09669 putative symporter Ya 99.3 8.2E-11 1.8E-15 101.1 13.9 121 95-215 263-391 (444)
200 TIGR00885 fucP L-fucose:H+ sym 99.3 5.2E-10 1.1E-14 95.1 18.2 144 78-225 250-400 (410)
201 KOG3762|consensus 99.3 2.9E-11 6.3E-16 101.9 10.2 167 67-235 378-545 (618)
202 PRK09848 glucuronide transport 99.3 4.5E-10 9.7E-15 96.6 17.5 148 61-208 9-173 (448)
203 PF03825 Nuc_H_symport: Nucleo 99.2 4.1E-10 8.9E-15 95.0 16.0 159 67-229 9-172 (400)
204 KOG2532|consensus 99.2 1E-10 2.2E-15 100.1 12.2 178 58-237 256-447 (466)
205 PRK11652 emrD multidrug resist 99.2 8.6E-10 1.9E-14 93.2 17.7 134 81-216 228-364 (394)
206 KOG3764|consensus 99.2 4.8E-11 1E-15 97.3 8.9 173 64-236 274-453 (464)
207 TIGR00926 2A1704 Peptide:H+ sy 99.2 6.8E-10 1.5E-14 98.7 16.4 157 79-235 6-180 (654)
208 KOG2563|consensus 99.2 6.2E-10 1.3E-14 92.3 14.9 184 53-239 38-237 (480)
209 TIGR00886 2A0108 nitrite extru 99.2 3.3E-10 7.2E-15 94.6 11.7 119 78-198 243-365 (366)
210 COG2211 MelB Na+/melibiose sym 99.2 1.2E-09 2.5E-14 92.4 14.7 154 62-215 238-399 (467)
211 PRK09584 tppB putative tripept 99.2 2.1E-09 4.5E-14 93.7 16.4 137 98-235 318-477 (500)
212 PF00083 Sugar_tr: Sugar (and 99.2 1.4E-13 2.9E-18 118.4 -9.6 156 87-245 279-444 (451)
213 COG2211 MelB Na+/melibiose sym 99.2 3.3E-09 7.1E-14 89.7 16.5 184 59-242 11-212 (467)
214 PF03209 PUCC: PUCC protein; 99.1 9E-09 1.9E-13 85.0 16.6 159 75-234 223-395 (403)
215 PRK10207 dipeptide/tripeptide 99.1 5.6E-09 1.2E-13 90.7 15.9 140 98-238 311-477 (489)
216 TIGR00788 fbt folate/biopterin 99.1 1.6E-09 3.5E-14 93.6 12.1 126 88-214 280-415 (468)
217 COG0738 FucP Fucose permease [ 99.1 7.4E-09 1.6E-13 85.0 15.1 166 61-230 237-402 (422)
218 PRK15403 multidrug efflux syst 99.1 2.3E-08 5E-13 85.2 18.4 165 65-232 223-392 (413)
219 COG0477 ProP Permeases of the 99.1 2.2E-08 4.7E-13 80.6 17.5 154 74-228 16-176 (338)
220 KOG2816|consensus 99.1 1.1E-08 2.3E-13 87.6 15.9 133 106-244 72-206 (463)
221 TIGR01301 GPH_sucrose GPH fami 99.0 7.4E-08 1.6E-12 82.8 17.7 183 59-241 257-475 (477)
222 PRK11462 putative transporter; 99.0 6.8E-08 1.5E-12 83.4 17.4 121 95-215 262-390 (460)
223 KOG3626|consensus 99.0 6.5E-09 1.4E-13 91.8 11.0 179 61-241 98-347 (735)
224 PF03137 OATP: Organic Anion T 98.9 1.7E-10 3.8E-15 100.6 -0.4 173 65-239 8-252 (539)
225 PF03209 PUCC: PUCC protein; 98.9 1.5E-07 3.3E-12 77.8 15.9 127 87-215 6-154 (403)
226 KOG0254|consensus 98.9 1.7E-07 3.6E-12 82.2 16.9 183 59-244 294-490 (513)
227 KOG4686|consensus 98.8 3.7E-10 8E-15 88.4 -0.9 155 57-213 41-199 (459)
228 PF03092 BT1: BT1 family; Int 98.8 1.3E-07 2.8E-12 81.0 13.9 155 84-239 13-177 (433)
229 KOG0252|consensus 98.8 1.4E-08 3.1E-13 84.5 7.6 181 60-243 304-503 (538)
230 PF11700 ATG22: Vacuole efflux 98.8 1.7E-06 3.7E-11 74.7 19.2 145 97-242 71-252 (477)
231 PF06609 TRI12: Fungal trichot 98.7 1E-06 2.2E-11 77.3 16.4 148 60-208 310-463 (599)
232 PF01770 Folate_carrier: Reduc 98.7 2.8E-06 6.1E-11 71.1 18.1 161 74-236 17-181 (412)
233 TIGR01272 gluP glucose/galacto 98.6 2.3E-07 5E-12 76.0 9.9 90 145-235 6-111 (310)
234 PF05978 UNC-93: Ion channel r 98.6 4.9E-06 1.1E-10 60.6 15.0 110 99-210 40-149 (156)
235 KOG2615|consensus 98.6 5.9E-07 1.3E-11 73.4 11.2 145 67-212 268-414 (451)
236 KOG0637|consensus 98.6 1.7E-07 3.7E-12 78.1 8.2 148 60-209 32-202 (498)
237 KOG2533|consensus 98.6 1.8E-07 3.9E-12 80.7 8.5 162 61-223 274-442 (495)
238 PF12832 MFS_1_like: MFS_1 lik 98.6 5.4E-07 1.2E-11 57.4 8.3 70 66-136 6-75 (77)
239 KOG1237|consensus 98.6 3.1E-06 6.8E-11 74.4 15.7 181 55-235 32-243 (571)
240 PTZ00207 hypothetical protein; 98.6 3.3E-06 7.1E-11 74.5 15.3 176 59-237 352-552 (591)
241 PRK15462 dipeptide/tripeptide 98.6 4E-06 8.7E-11 72.6 15.4 131 98-229 310-469 (493)
242 PF06779 DUF1228: Protein of u 98.5 9.8E-07 2.1E-11 56.8 8.1 79 73-152 5-83 (85)
243 KOG0255|consensus 98.4 2.5E-05 5.4E-10 68.7 17.5 143 99-243 353-498 (521)
244 KOG2816|consensus 98.4 5.5E-06 1.2E-10 71.1 11.8 126 84-211 265-391 (463)
245 PF00854 PTR2: POT family; In 98.4 4.2E-06 9.1E-11 70.4 10.6 110 127-236 2-122 (372)
246 COG2270 Permeases of the major 98.3 2.7E-06 5.9E-11 70.6 7.5 159 82-241 37-224 (438)
247 TIGR00769 AAA ADP/ATP carrier 98.2 0.00023 5E-09 61.3 18.2 145 60-210 7-189 (472)
248 PRK03612 spermidine synthase; 98.2 0.00025 5.5E-09 62.1 18.0 157 71-230 25-190 (521)
249 COG3104 PTR2 Dipeptide/tripept 98.1 0.00031 6.8E-09 59.9 15.3 141 97-238 325-488 (498)
250 PF02487 CLN3: CLN3 protein; 98.0 9.6E-05 2.1E-09 62.0 11.4 138 65-209 252-394 (402)
251 TIGR00805 oat sodium-independe 98.0 0.0001 2.2E-09 66.3 12.3 152 60-212 330-581 (633)
252 KOG2563|consensus 97.9 2.2E-05 4.8E-10 65.8 5.5 179 61-241 267-454 (480)
253 PF03092 BT1: BT1 family; Int 97.8 0.00019 4.2E-09 61.6 10.2 148 89-237 245-413 (433)
254 KOG2325|consensus 97.8 6.9E-05 1.5E-09 64.2 7.4 182 55-237 257-475 (488)
255 PF03137 OATP: Organic Anion T 97.7 7.8E-06 1.7E-10 71.8 0.0 156 56-212 301-514 (539)
256 PF02487 CLN3: CLN3 protein; 97.7 0.002 4.3E-08 54.2 13.6 133 99-238 62-196 (402)
257 PF06963 FPN1: Ferroportin1 (F 97.5 0.019 4.2E-07 49.1 17.7 127 79-207 277-413 (432)
258 KOG4332|consensus 97.4 0.00023 5E-09 56.1 4.2 143 88-234 64-217 (454)
259 PF06963 FPN1: Ferroportin1 (F 97.2 0.068 1.5E-06 45.8 17.4 173 62-235 4-198 (432)
260 KOG3762|consensus 97.2 0.00031 6.7E-09 60.4 3.3 77 69-146 20-97 (618)
261 KOG3098|consensus 97.1 0.0087 1.9E-07 51.3 11.2 105 102-208 56-160 (461)
262 KOG3098|consensus 97.1 0.057 1.2E-06 46.5 15.5 142 62-205 242-407 (461)
263 KOG3574|consensus 97.0 0.026 5.5E-07 47.1 12.3 148 56-208 27-191 (510)
264 KOG1330|consensus 96.9 0.0043 9.3E-08 52.7 7.7 134 82-216 269-417 (493)
265 TIGR00939 2a57 Equilibrative N 96.9 0.052 1.1E-06 46.8 14.0 109 97-207 308-429 (437)
266 PF03219 TLC: TLC ATP/ADP tran 96.3 0.6 1.3E-05 40.9 17.1 152 57-211 21-205 (491)
267 TIGR00806 rfc RFC reduced fola 96.2 0.12 2.5E-06 44.9 11.6 99 97-196 299-399 (511)
268 PF01770 Folate_carrier: Reduc 96.0 0.18 3.9E-06 42.8 11.7 103 92-195 281-385 (412)
269 KOG3880|consensus 95.9 0.025 5.5E-07 45.7 6.0 173 61-239 13-201 (409)
270 COG3202 ATP/ADP translocase [E 95.7 1.2 2.6E-05 38.6 16.6 151 56-212 23-210 (509)
271 KOG0637|consensus 95.7 0.045 9.8E-07 46.6 7.1 135 99-233 335-492 (498)
272 KOG3626|consensus 95.4 0.034 7.3E-07 50.3 5.7 83 59-141 391-476 (735)
273 PF01733 Nucleoside_tran: Nucl 95.4 0.005 1.1E-07 50.5 0.4 106 100-206 186-304 (309)
274 KOG1479|consensus 95.2 0.28 6E-06 41.5 10.1 108 97-206 283-399 (406)
275 KOG3097|consensus 95.0 0.76 1.6E-05 37.8 11.5 102 106-208 68-183 (390)
276 KOG4332|consensus 94.9 0.96 2.1E-05 36.3 11.7 134 98-232 284-426 (454)
277 PF13000 Acatn: Acetyl-coenzym 94.5 0.57 1.2E-05 40.7 10.3 146 63-209 3-177 (544)
278 TIGR00769 AAA ADP/ATP carrier 94.4 3.3 7.1E-05 36.2 18.0 73 156-228 273-345 (472)
279 KOG3810|consensus 93.9 1 2.3E-05 37.4 10.2 135 97-235 272-419 (433)
280 COG4262 Predicted spermidine s 93.6 3.7 8E-05 34.3 13.4 86 91-176 38-132 (508)
281 KOG1479|consensus 93.6 4 8.7E-05 34.7 15.0 30 149-178 117-146 (406)
282 KOG2601|consensus 93.5 2.9 6.4E-05 35.2 12.1 164 65-228 32-217 (503)
283 KOG3810|consensus 92.7 0.34 7.3E-06 40.2 5.7 154 80-235 24-181 (433)
284 TIGR00939 2a57 Equilibrative N 92.3 3.5 7.7E-05 35.7 11.8 76 104-180 53-136 (437)
285 KOG3880|consensus 92.3 0.15 3.3E-06 41.4 3.2 109 96-209 288-401 (409)
286 TIGR00880 2_A_01_02 Multidrug 89.1 5.5 0.00012 27.3 9.6 44 96-139 87-130 (141)
287 PF03219 TLC: TLC ATP/ADP tran 88.2 18 0.00038 32.0 18.8 74 157-230 290-363 (491)
288 PF13000 Acatn: Acetyl-coenzym 88.0 18 0.0004 31.9 13.9 57 155-212 411-467 (544)
289 PRK10263 DNA translocase FtsK; 84.6 12 0.00026 36.9 10.2 20 105-124 61-80 (1355)
290 COG5336 Uncharacterized protei 84.6 6.2 0.00013 26.5 6.1 27 105-131 51-78 (116)
291 KOG3574|consensus 83.8 19 0.00041 30.8 10.0 125 88-215 292-434 (510)
292 KOG1237|consensus 83.0 8.6 0.00019 34.6 8.4 63 148-211 457-519 (571)
293 PF05631 DUF791: Protein of un 80.2 34 0.00074 28.7 17.1 142 70-211 129-303 (354)
294 PF06912 DUF1275: Protein of u 79.1 26 0.00057 26.8 17.9 36 189-225 165-200 (209)
295 PF12805 FUSC-like: FUSC-like 78.6 20 0.00044 29.0 8.6 35 132-166 5-40 (284)
296 PF02694 UPF0060: Uncharacteri 76.7 7.4 0.00016 26.2 4.5 50 96-145 54-103 (107)
297 PRK02237 hypothetical protein; 74.2 13 0.00028 25.1 5.2 50 96-145 56-105 (109)
298 TIGR01667 YCCS_YHJK integral m 72.7 59 0.0013 30.2 10.7 53 116-168 43-100 (701)
299 PF11947 DUF3464: Protein of u 72.4 16 0.00034 26.5 5.7 50 148-201 96-145 (153)
300 TIGR01666 YCCS hypothetical me 71.6 66 0.0014 29.9 10.8 52 117-168 44-100 (704)
301 PRK11469 hypothetical protein; 69.9 45 0.00098 25.2 9.4 78 58-143 104-182 (188)
302 COG2233 UraA Xanthine/uracil p 68.9 79 0.0017 27.6 10.0 117 61-180 17-136 (451)
303 PF07760 DUF1616: Protein of u 67.7 65 0.0014 26.2 9.4 58 152-212 22-79 (287)
304 KOG4830|consensus 66.0 7.4 0.00016 31.2 3.1 64 65-129 22-94 (412)
305 TIGR00926 2A1704 Peptide:H+ sy 64.9 44 0.00095 30.8 8.3 60 148-208 564-623 (654)
306 PF11947 DUF3464: Protein of u 62.8 39 0.00085 24.6 6.1 32 95-126 95-126 (153)
307 PF07672 MFS_Mycoplasma: Mycop 62.8 79 0.0017 25.4 11.3 78 100-177 145-232 (267)
308 KOG2765|consensus 62.4 63 0.0014 27.4 7.8 59 120-180 208-272 (416)
309 PF00854 PTR2: POT family; In 59.8 68 0.0015 26.9 8.2 73 73-145 44-121 (372)
310 PF06813 Nodulin-like: Nodulin 59.4 74 0.0016 25.3 7.7 49 188-237 39-87 (250)
311 PLN02776 prenyltransferase 57.6 1.1E+02 0.0025 25.6 9.5 20 126-145 76-95 (341)
312 COG1268 BioY Uncharacterized c 55.9 64 0.0014 24.3 6.4 24 102-125 88-111 (184)
313 COG5336 Uncharacterized protei 55.1 64 0.0014 21.9 5.8 32 182-213 38-69 (116)
314 PF06779 DUF1228: Protein of u 54.2 57 0.0012 21.1 7.3 65 160-228 5-69 (85)
315 PF02632 BioY: BioY family; I 53.8 78 0.0017 22.9 6.5 26 102-127 59-84 (148)
316 PRK14199 camphor resistance pr 51.4 83 0.0018 22.1 9.1 23 157-179 70-92 (128)
317 PRK14214 camphor resistance pr 51.3 79 0.0017 21.8 8.9 24 156-179 62-85 (118)
318 PRK14232 camphor resistance pr 49.6 86 0.0019 21.7 8.7 24 156-179 60-83 (120)
319 PRK03612 spermidine synthase; 49.3 2E+02 0.0042 25.8 17.2 29 96-124 54-82 (521)
320 COG2119 Predicted membrane pro 48.0 1.2E+02 0.0026 22.9 9.2 36 104-139 142-177 (190)
321 TIGR00844 c_cpa1 na(+)/h(+) an 47.5 2.6E+02 0.0056 26.6 11.9 14 213-226 128-141 (810)
322 PLN02332 membrane bound O-acyl 47.2 2E+02 0.0043 25.3 10.8 28 126-153 341-368 (465)
323 PF04226 Transgly_assoc: Trans 47.2 52 0.0011 18.5 4.2 33 198-230 7-39 (48)
324 PRK14200 camphor resistance pr 47.0 99 0.0021 21.7 9.2 24 156-179 69-92 (127)
325 PRK03818 putative transporter; 46.1 2.3E+02 0.005 25.6 10.1 80 97-177 436-516 (552)
326 PRK14229 camphor resistance pr 45.9 93 0.002 21.1 8.3 24 156-179 56-79 (108)
327 PF11299 DUF3100: Protein of u 45.5 17 0.00036 28.4 2.0 109 89-205 106-225 (241)
328 KOG4830|consensus 45.3 47 0.001 26.9 4.4 120 60-180 201-324 (412)
329 PRK14206 camphor resistance pr 45.0 1.1E+02 0.0023 21.5 9.6 24 156-179 67-90 (127)
330 PRK14205 camphor resistance pr 44.6 1E+02 0.0022 21.3 8.7 24 156-179 61-84 (118)
331 PF10183 ESSS: ESSS subunit of 43.7 32 0.00069 23.2 3.0 33 209-241 53-85 (105)
332 PRK14228 camphor resistance pr 43.3 1.1E+02 0.0024 21.2 9.7 24 156-179 64-87 (122)
333 PF09527 ATPase_gene1: Putativ 41.5 70 0.0015 18.4 6.6 33 104-136 8-41 (55)
334 TIGR03802 Asp_Ala_antiprt aspa 41.2 2.8E+02 0.006 25.2 9.5 82 97-180 451-533 (562)
335 PF10785 NADH-u_ox-rdase: NADH 40.9 99 0.0021 20.0 5.5 39 111-149 33-78 (86)
336 PF11511 RhodobacterPufX: Intr 40.5 79 0.0017 19.3 3.9 30 214-243 29-58 (67)
337 PF04341 DUF485: Protein of un 40.2 1E+02 0.0023 20.0 5.5 52 56-107 12-63 (91)
338 PRK11588 hypothetical protein; 40.2 2.7E+02 0.0059 24.8 9.4 37 116-152 136-174 (506)
339 PRK10692 hypothetical protein; 39.2 89 0.0019 20.2 4.2 19 125-143 3-21 (92)
340 PRK14227 camphor resistance pr 38.9 1.3E+02 0.0029 20.9 9.3 24 156-179 66-89 (124)
341 PRK14195 camphor resistance pr 38.9 1.3E+02 0.0029 20.9 9.2 24 156-179 66-89 (125)
342 PRK14222 camphor resistance pr 38.1 1.4E+02 0.003 20.8 9.6 24 156-179 66-89 (124)
343 TIGR00801 ncs2 uracil-xanthine 37.5 2.7E+02 0.0059 24.0 14.3 101 84-187 26-131 (415)
344 PF07857 DUF1632: CEO family ( 37.5 1.9E+02 0.0041 23.1 6.8 17 92-108 214-230 (254)
345 TIGR03173 pbuX xanthine permea 37.1 2.7E+02 0.0058 23.9 11.7 102 84-187 16-118 (406)
346 PF10225 DUF2215: Uncharacteri 36.4 2.1E+02 0.0046 22.8 7.0 34 145-180 30-63 (249)
347 PRK14219 camphor resistance pr 35.3 1.6E+02 0.0035 20.8 9.6 24 156-179 65-88 (132)
348 COG1742 Uncharacterized conser 35.2 44 0.00095 22.5 2.5 46 95-140 54-99 (109)
349 KOG3097|consensus 34.2 1.9E+02 0.004 24.5 6.4 43 95-137 309-351 (390)
350 PF00860 Xan_ur_permease: Perm 33.7 2E+02 0.0043 24.5 6.9 99 84-187 22-127 (389)
351 COG3619 Predicted membrane pro 33.2 2.4E+02 0.0052 22.1 18.6 31 95-125 54-84 (226)
352 PF13940 Ldr_toxin: Toxin Ldr, 33.2 75 0.0016 16.4 2.6 20 103-122 15-34 (35)
353 COG3202 ATP/ADP translocase [E 33.1 3.6E+02 0.0077 24.1 18.5 78 157-234 292-370 (509)
354 COG2076 EmrE Membrane transpor 32.4 1.6E+02 0.0035 19.9 9.6 67 112-178 16-83 (106)
355 PRK14234 camphor resistance pr 32.1 1.8E+02 0.0038 20.3 9.5 24 156-179 67-90 (124)
356 PF10762 DUF2583: Protein of u 30.9 1.1E+02 0.0024 19.6 3.6 18 125-142 3-20 (89)
357 PF04474 DUF554: Protein of un 30.2 1.7E+02 0.0036 23.0 5.4 52 107-158 13-64 (226)
358 PRK14212 camphor resistance pr 29.5 2E+02 0.0044 20.1 9.4 24 156-179 66-89 (128)
359 PRK14215 camphor resistance pr 29.5 2E+02 0.0043 20.1 9.4 24 156-179 66-89 (126)
360 PRK14233 camphor resistance pr 28.5 2.2E+02 0.0047 20.2 9.1 24 156-179 70-93 (133)
361 PRK14198 camphor resistance pr 28.4 2.1E+02 0.0045 19.9 9.3 24 156-179 65-88 (124)
362 PRK10599 calcium/sodium:proton 28.4 3.7E+02 0.0081 22.9 9.6 48 88-138 249-299 (366)
363 COG4769 Predicted membrane pro 28.4 1.1E+02 0.0025 22.5 3.8 49 106-160 83-131 (181)
364 TIGR00986 3a0801s05tom22 mitoc 28.3 1.8E+02 0.0039 20.9 4.8 26 172-198 56-81 (145)
365 COG1971 Predicted membrane pro 28.2 2.7E+02 0.0058 21.2 10.0 76 59-142 107-183 (190)
366 PF02990 EMP70: Endomembrane p 27.9 4.4E+02 0.0096 23.6 8.7 25 98-122 295-319 (521)
367 PF07672 MFS_Mycoplasma: Mycop 27.8 51 0.0011 26.4 2.3 56 182-237 2-62 (267)
368 COG5547 Small integral membran 27.4 1.4E+02 0.003 17.6 4.6 38 127-164 9-46 (62)
369 COG1811 Uncharacterized membra 27.2 1.8E+02 0.0039 22.6 4.9 50 108-157 15-64 (228)
370 PRK04972 putative transporter; 26.9 4.8E+02 0.01 23.7 9.5 91 97-190 446-537 (558)
371 PRK14208 camphor resistance pr 26.8 2.3E+02 0.0049 19.8 9.4 24 156-179 66-89 (126)
372 PLN02601 beta-carotene hydroxy 26.4 2.6E+02 0.0057 22.6 5.8 20 104-123 138-157 (303)
373 PF07857 DUF1632: CEO family ( 26.0 3.1E+02 0.0067 21.9 6.3 9 182-190 77-85 (254)
374 COG4177 LivM ABC-type branched 25.9 3.8E+02 0.0083 22.2 8.9 60 150-211 209-268 (314)
375 PF11151 DUF2929: Protein of u 25.3 1.5E+02 0.0033 17.4 5.2 38 197-234 13-50 (57)
376 cd02432 Nodulin-21_like_1 Nodu 25.2 3.3E+02 0.0071 21.2 8.4 33 107-139 172-204 (218)
377 PF12832 MFS_1_like: MFS_1 lik 24.6 1.9E+02 0.004 18.1 7.4 38 186-223 35-72 (77)
378 PRK14225 camphor resistance pr 24.6 2.6E+02 0.0057 19.9 10.2 24 156-179 77-100 (137)
379 TIGR02230 ATPase_gene1 F0F1-AT 24.4 2.3E+02 0.0049 19.0 6.6 18 112-129 58-76 (100)
380 PF06826 Asp-Al_Ex: Predicted 24.1 3E+02 0.0066 20.4 10.0 82 96-179 56-138 (169)
381 PF03601 Cons_hypoth698: Conse 24.1 3.2E+02 0.007 22.5 6.3 21 186-206 146-166 (305)
382 PF03741 TerC: Integral membra 24.1 3.2E+02 0.0069 20.6 6.7 58 166-228 13-72 (183)
383 PRK14230 camphor resistance pr 23.8 2.5E+02 0.0055 19.4 9.4 24 156-179 60-83 (119)
384 PF06341 DUF1056: Protein of u 23.5 1.8E+02 0.0039 17.6 3.7 31 149-180 28-58 (63)
385 PF13937 DUF4212: Domain of un 23.4 1.2E+02 0.0026 19.4 3.0 33 203-235 30-64 (81)
386 PF02990 EMP70: Endomembrane p 23.1 2.9E+02 0.0064 24.7 6.4 14 153-166 303-316 (521)
387 PF11298 DUF3099: Protein of u 23.0 1.8E+02 0.0038 18.2 3.5 29 120-148 11-39 (73)
388 COG1230 CzcD Co/Zn/Cd efflux s 22.8 4.4E+02 0.0094 21.7 12.6 49 87-141 51-102 (296)
389 KOG2927|consensus 22.6 1E+02 0.0023 25.7 3.1 22 188-209 216-237 (372)
390 PRK14216 camphor resistance pr 22.5 2.9E+02 0.0062 19.5 9.2 22 157-178 71-92 (132)
391 TIGR01625 YidE_YbjL_dupl AspT/ 22.4 3.2E+02 0.0068 19.9 7.1 82 97-179 57-139 (154)
392 TIGR02840 spore_YtaF putative 22.1 3.7E+02 0.008 20.6 9.7 74 58-140 127-203 (206)
393 PF04281 Tom22: Mitochondrial 21.8 3.1E+02 0.0067 19.6 5.8 27 172-199 58-84 (137)
394 COG1280 RhtB Putative threonin 21.6 3.6E+02 0.0078 20.6 5.9 32 61-92 113-144 (208)
395 KOG2881|consensus 21.3 1.3E+02 0.0028 24.1 3.3 38 105-142 249-286 (294)
396 COG1079 Uncharacterized ABC-ty 21.2 4.8E+02 0.01 21.6 9.2 95 110-209 21-117 (304)
397 PRK14220 camphor resistance pr 21.0 2.9E+02 0.0064 19.1 8.9 24 156-179 62-85 (120)
398 PF13493 DUF4118: Domain of un 20.7 1.1E+02 0.0023 20.2 2.5 24 103-126 82-105 (105)
399 PF06570 DUF1129: Protein of u 20.7 3.9E+02 0.0084 20.4 10.1 28 209-236 170-197 (206)
400 PF09930 DUF2162: Predicted tr 20.6 3.9E+02 0.0085 20.9 5.8 50 88-140 123-172 (224)
401 PF03911 Sec61_beta: Sec61beta 20.5 1.6E+02 0.0035 15.9 2.8 19 122-140 17-35 (41)
402 PF04550 Phage_holin_2: Phage 20.3 2.6E+02 0.0057 18.2 5.4 32 149-180 31-62 (89)
403 COG4239 ABC-type uncharacteriz 20.3 4.9E+02 0.011 21.3 6.9 49 113-161 165-215 (341)
404 PF15192 TMEM213: TMEM213 fami 20.2 89 0.0019 19.4 1.8 15 207-221 46-60 (82)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.1e-25 Score=184.49 Aligned_cols=182 Identities=24% Similarity=0.302 Sum_probs=173.6
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
++..+..++.+.++.|..+.......+++|+. .+|+|.+..+.|+..+.|.++..++.|+...+.||+.||++++....
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 34567778888899999899999998998886 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
+++++.+++++++|++.++++|++.|+..|..++...++..+..|+ ++|++++++...+..++.++|.+++.++.+.+|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp-~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPP-GKRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhHhhheee
Q psy11010 215 KTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
||++|++.++++++..+..+...|
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999988888888
No 2
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=1.6e-24 Score=187.94 Aligned_cols=183 Identities=20% Similarity=0.217 Sum_probs=165.2
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
+|..+..+++..++...+.+.+...+|.. .+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++.+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56778888888999889988887777776 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcc-cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY-PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
++.+++++++|++.++++|+++|+|.+...+.....+.+.+ |+ ++|++++|++.....+|..+||.+++++.++.|||
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~-~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEE-KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 99999999999999999999999999999888888887776 55 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 217 APFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
+.|++...+.++..++..+..|++++
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999888888777666666665443
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1.6e-24 Score=183.79 Aligned_cols=184 Identities=14% Similarity=0.079 Sum_probs=163.7
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+.+|+.+..+++..+++.++........+ .+++++|.+..+.+++.+++.+++.+++++.|+++||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 34577777788888888888877766665 56899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh----
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---- 211 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~---- 211 (256)
..++.++++++++++.+++.|++.|++.+...+....++.|++|+ ++|++++++++....+|..+++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-YFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999989999999998 999999999999999999999999998864
Q ss_pred --ccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 212 --FVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 212 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
..|||+.|++.+++.++..++.+++.+|.+
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 368999999998888876666666666554
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=3.8e-24 Score=180.40 Aligned_cols=182 Identities=20% Similarity=0.206 Sum_probs=157.6
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
++|..++.+.++.+..........++.|. +.+++|.++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34555556566555544444444455565 47889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
.++.+++.+++|++.++++|+++|++.+...+...+++.|++|+ ++|++++|+++.+..+|..++|++++.+.++.|||
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPA-GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhheeecC
Q psy11010 217 APFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
+.|++.+++.++..+..+...|+.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999988877666655555543
No 5
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.2e-23 Score=177.42 Aligned_cols=181 Identities=14% Similarity=0.174 Sum_probs=156.7
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
..|+.+..+.++.+..........+.+|++ .+++|.++++.++..+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 355655666666555555555555666665 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+ ++|++++++.....++|..++|.+++++.+..|||
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPP-RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhheeec
Q psy11010 217 APFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+.|++.+++.++..+......|+
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~ 197 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPS 197 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999887777655444443444
No 6
>KOG1330|consensus
Probab=99.92 E-value=1.6e-25 Score=183.57 Aligned_cols=186 Identities=21% Similarity=0.293 Sum_probs=173.5
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
....++.+.++++...++.++.+.+..+++.. ++.+|++++..|++.+.+.+.+.+++|++|+++|||.||.++.+|..
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v-~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEV-QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHH-HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 35567778889999999999999988877664 78899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
++.++.++.+++..+|++.++|.+.|+|.+...+..+++++|.+|. .+|++.+++++.+..+|..+|.+++..+.+..+
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~-~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD-DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcc-hhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 9999999999999999999999999999999999999999999997 999999999999999999999999999988877
Q ss_pred -chHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 215 -KTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
|||.|+..+++.++..++.+++.+++.+
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999988888776654
No 7
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=3e-23 Score=171.99 Aligned_cols=173 Identities=27% Similarity=0.460 Sum_probs=150.8
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
+++.++.........+..+.++.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 44556666666667777775668999999999999999999999999999999999999999999999999999666666
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHH
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 225 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~ 225 (256)
+++.+.++++|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..++|.+++.+.+..||++.|++.+++
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchh-hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 67777999999999999999999999999999998 99999999999999999999999999999889999999999999
Q ss_pred HHHHHhHhhheeec
Q psy11010 226 ALGDGCKCNYTIVQ 239 (256)
Q Consensus 226 ~~~~~~~~~~~~~~ 239 (256)
.++..++..+..++
T Consensus 161 ~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 161 SLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHCCC--
T ss_pred hhhhhhhHhhhhhh
Confidence 99877654344443
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=3.7e-23 Score=176.69 Aligned_cols=180 Identities=16% Similarity=0.137 Sum_probs=155.7
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
++..+...++..+...+....+....|.+ .+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 44455555666666666655555666665 57799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchH
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTA 217 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~ 217 (256)
++.++++++++++.+++.|++.|++.|...+...+++.|++|+ ++|++++++++.+..+|..++|.+.+++.+..|||+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR-TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 9999999999999999999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhhheeec
Q psy11010 218 PFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
.|++.+++.++..++..+..++
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999888776655544444443
No 9
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=1.6e-22 Score=171.60 Aligned_cols=174 Identities=16% Similarity=0.154 Sum_probs=152.5
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
.+..+........+.|.+|. +.++++.+..+.++..+++.+++.+++++.|+++||+|||++++.+.++.+++.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF 100 (413)
T ss_pred HHHHHHHHHHHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 33344455566666777777 47889999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHH
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 225 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~ 225 (256)
+++++.++++|+++|++.+...+...+++.|++|+ ++|++++++.+....+|..+||.+++.+.++.|||+.|++.+++
T Consensus 101 a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 101 TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ-TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999987777778889999997 99999999999999999999999999999989999999999988
Q ss_pred HHHHHhHhhheeecCC
Q psy11010 226 ALGDGCKCNYTIVQKS 241 (256)
Q Consensus 226 ~~~~~~~~~~~~~~~~ 241 (256)
.++..+..++..|+++
T Consensus 180 ~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 180 GLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHhCCCCc
Confidence 8877665555556543
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=1e-22 Score=171.96 Aligned_cols=182 Identities=21% Similarity=0.258 Sum_probs=161.3
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
.+++|+.+...++..+.+.++.....++.+.+ .+++|.++.+.+++.+++.++..+++++.|+++||+|||++++.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45677888888899999998888887777765 78899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
+.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPK-HLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999988766
Q ss_pred --chHHHHHHHHHHHHHHhHhhheeec
Q psy11010 215 --KTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
||+.|++.++..++..+ .....|+
T Consensus 165 ~~w~~~f~~~~~~~~~~~~-~~~~~~~ 190 (405)
T TIGR00891 165 DGWRALFFISILPIIFALW-LRKNIPE 190 (405)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHhCCC
Confidence 99999887666555433 3333444
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=7.4e-23 Score=170.82 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=139.4
Q ss_pred HhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHH
Q psy11010 73 NMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL 152 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
+.....+.+..|.. .+++|.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.......+++..+
T Consensus 4 ~~~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 4 QAIWVTFSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hHHHHHHHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34444555666665 78899999999999999999999999999999999999988776655555544333334789999
Q ss_pred HHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 153 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 153 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
+++|+++|++.+. .......++|++|+ ++|++++++.+.+..+|..+++++++++.++.|||+.|++.+++.++..++
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~-~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIRE-ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 9999999999986 45556777999998 999999999999999999999999999999999999999988888887777
Q ss_pred hhheeecCCC
Q psy11010 233 CNYTIVQKSS 242 (256)
Q Consensus 233 ~~~~~~~~~~ 242 (256)
.++..||+++
T Consensus 161 ~~~~lp~~p~ 170 (368)
T TIGR00903 161 VLAALPALPF 170 (368)
T ss_pred HHHHcCCCCC
Confidence 7777776543
No 12
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=1.6e-22 Score=169.85 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+..+....++.........+..|.+ .+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEI-AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 33444444455566667777777765 68899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
+++.++++++.+++.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..++|.+++.+.++.+|++.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 85 LGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPG-EELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 9999999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhheeecCC
Q psy11010 221 ILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+.+++.++..+..++..|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 988887777666665555543
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.91 E-value=1.2e-22 Score=171.97 Aligned_cols=184 Identities=17% Similarity=0.142 Sum_probs=162.6
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+++|..+...++..+.+.++........|.+ .+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRM-AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 4667777778888888888888776666665 688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..+++.+++.+.+..+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGP-RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 999998899999999999999999999999999999999999998 9999999999999999999999999998888899
Q ss_pred hHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
++.|++.+++.++..++..+..|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999888776665555555555543
No 14
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=6.1e-23 Score=177.62 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+..+++..++..++.....+..|.+ .+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTI-AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34556667777777777776666665 68899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
++++++++++.++++|+++|++.+...+...+++.|++|+ ++|++++++++....+|..+||.+++++.++.|||+.|+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP-EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 9999999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhheeecC
Q psy11010 221 ILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~ 240 (256)
+.+.+.++..++..+..+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCc
Confidence 98888777666666555543
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.90 E-value=1.2e-22 Score=181.04 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=156.2
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+..|..+.+++++.+..++....+..++|.+ .++++.+..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i-~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSA-EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 4455566667777777777777666666654 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc---
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--- 212 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~--- 212 (256)
.+++.++++++++++.++++|++.|++.|...+...+++.|++|+ ++|++.++++..+..+|.++++.++.++...
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-EKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999888766543
Q ss_pred ----------cCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 213 ----------VGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 213 ----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.+||+.+++.++..++.. +..++.|+.++
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPr 359 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPR 359 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHH
Confidence 358998888777666644 44455666543
No 16
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=1.8e-22 Score=169.74 Aligned_cols=178 Identities=15% Similarity=0.195 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+..+.+..+..........+.+|.+ .+++|.+.++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 34555666666666666777777775 68899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
++++++++++.+++.|++.|++.+...+....++.|++++ ++|++++++...+..+|..++|++++++.+..|||+.|+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP-GKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh-HHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 9999999999999999999999999888888999999997 899999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHhHhhheeecC
Q psy11010 221 ILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~ 240 (256)
+.+++.++..+..++..|+.
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99888777666555555553
No 17
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.90 E-value=1.3e-22 Score=171.58 Aligned_cols=172 Identities=20% Similarity=0.233 Sum_probs=150.4
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
+.++.+..+++..++...+.....+.++.++.+++|.++.+.|++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 44556667777788888888888889998888999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhh---c-----hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 137 FLSTLIFAFG---R-----TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 137 ~~~~~~~~~~---~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
+++.+.+.++ + +++.+++.|+++|++.+...+...+++.|++|+ ++|++++++.+....+|..+||.++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGA-LHTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcCh-hhhccchhhhhhhhhHHHHHHHHHHHH
Confidence 7776655432 2 466789999999999999999999999999998 999999999999999999999999999
Q ss_pred hhhccCchHHHHHHHHHHHHH
Q psy11010 209 MYQFVGKTAPFLILSALALGD 229 (256)
Q Consensus 209 l~~~~g~~~~~~~~~~~~~~~ 229 (256)
+.++.||++.+++.+++.++.
T Consensus 171 l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 171 LYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHcccHHHHHHHHHHHHHHH
Confidence 999999999888776665543
No 18
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=3.9e-22 Score=168.27 Aligned_cols=168 Identities=20% Similarity=0.210 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
..+..+.++.++.........|.+|.++.+++|.++.+.|++.+++.++..+++++.|+++||+|||++++.+.+...++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 34444555566666677777888888888899999999999999999999999999999999999999999988877665
Q ss_pred HHHH---Hh-----hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 140 TLIF---AF-----GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 140 ~~~~---~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
.+.. .. .++++.++++|+++|++.+...+...+++.|++|+ ++|++++++.+.+..+|..+||.+++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP-KHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc-cccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 4432 21 35778899999999999999989888999999998 999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHH
Q psy11010 212 FVGKTAPFLILSALALG 228 (256)
Q Consensus 212 ~~g~~~~~~~~~~~~~~ 228 (256)
..||++.+.+..++.++
T Consensus 174 ~~g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 174 HFGFAALALTTMVLPLL 190 (392)
T ss_pred ccChHHHHHHHHHHHHH
Confidence 89999887765555443
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=5.6e-22 Score=168.04 Aligned_cols=184 Identities=16% Similarity=0.179 Sum_probs=159.9
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
++.+.....+.+..++..+....+.+.++.+ .+++|.++.+.++..+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAV-VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 4445556666666666677777777777775 688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
..++.+++.++++++.+++.|+++|++.+...+...+++.|.+|+ ++|.+++++......+|..++|.+++++.++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEE-ADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999999999999999998888889999999998 9999999999888889999999999999998999
Q ss_pred hHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
++.|++.+++.++..+..++..|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999988888877666555555543
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.6e-23 Score=167.17 Aligned_cols=186 Identities=12% Similarity=0.113 Sum_probs=167.5
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
++.|+.++..+++.+....+.........|. +.++.++|.++.|++.+.+.+.+.++..+.|.++||.++|..+..+++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 4555666777777777666666655444444 578889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH--hhhhhc
Q psy11010 135 IMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG--GIMYQF 212 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~--~~l~~~ 212 (256)
+.++..++++++++.+.+.+..++.|..+|...|++...+..|+|+ ++||+..++++++.++|+.+.|++. +++..+
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr-~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR-KERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc-cccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999998 9999999999999999999999999 899988
Q ss_pred cCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 213 VGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.+||..|++.++++++..++.++..+++|+
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 899999999999999988888888777664
No 21
>PRK10504 putative transporter; Provisional
Probab=99.89 E-value=8.3e-22 Score=170.10 Aligned_cols=178 Identities=24% Similarity=0.284 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
+.++.++++.++..++.+.+.+..|.+ .+++|.++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSM-AQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 345566667777777777777777877 4679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHH
Q psy11010 140 TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPF 219 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~ 219 (256)
.+++.++++.+.+++.|+++|++.+...+...+++.|++|+ ++|+++.++.+....+|..+||.+++.+.++.|||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR-EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHH
Confidence 98888899999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhhheeec
Q psy11010 220 LILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~ 239 (256)
++...+..+..+......++
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 99887777766655554443
No 22
>PRK10054 putative transporter; Provisional
Probab=99.89 E-value=9.2e-22 Score=166.11 Aligned_cols=175 Identities=11% Similarity=0.073 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
+..+.+..++.........++++.++++++|.+..+.|++.+.+.++..+++++.|+++||+|||++++.+.++..++.+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 34455566666777777788889898899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHH
Q psy11010 142 IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLI 221 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~ 221 (256)
+..++++++.+++++++.|.+.+...+...++..|.+|+ ++|++++++.+...++|..++|.+++++.+ .+|+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 89 AIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSS-TSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 899999998888889888888888888889999999998 999999999999999999999999999876 689999998
Q ss_pred HHHHHHHHHhHhhheee
Q psy11010 222 LSALALGDGCKCNYTIV 238 (256)
Q Consensus 222 ~~~~~~~~~~~~~~~~~ 238 (256)
.+++.++..++..+..+
T Consensus 167 ~~~~~~i~~i~~~~~~~ 183 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQ 183 (395)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88877776555544443
No 23
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=1.3e-21 Score=165.11 Aligned_cols=182 Identities=21% Similarity=0.299 Sum_probs=156.8
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
.++.+....+...+..+......+.+|.+ .+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 45555555555656666666777777775 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchH
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTA 217 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~ 217 (256)
++.+++.++++++.+++.|++.|++.+...+....+..|.+++ ++++++.+..+.+..++..++|.+++++.+..||++
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG-TQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 9999999999999999999999999998888888899999997 899999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHhHhhheeecCC
Q psy11010 218 PFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.|++.+++.++..++..+..||++
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccC
Confidence 999988877765555555555543
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=8.7e-22 Score=167.82 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=152.5
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+.+++.+....+..+.++++.....+..+. +.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 345566677777777778888777666665 4788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
.+++.++.+++++++.++++|++.|++.+..++....++.|++|+ ++|++++++...+..+|.++++.+.+.+.+..||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPK-HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH-hHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999999998999
Q ss_pred hHHHHHHHHHHH
Q psy11010 216 TAPFLILSALAL 227 (256)
Q Consensus 216 ~~~~~~~~~~~~ 227 (256)
|+.|++..+..+
T Consensus 172 ~~~f~i~~~~~~ 183 (426)
T PRK12307 172 RAAFFVGLLPVL 183 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999987554433
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.89 E-value=1e-22 Score=175.58 Aligned_cols=180 Identities=14% Similarity=0.058 Sum_probs=150.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
.+..+..+++.+++...+...+....|. +.+++|.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 4445555666666666666666666665 478999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHh-----hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 138 LSTLIFAF-----GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 138 ~~~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
+..++.++ +++++.+++.|++.|++.+...+...++++|++|+ ++||+++|+++.+..+|..+++.+..++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 106 ICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPR-RKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCc-cceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 77665554 58999999999999999999999999999999998 9999999999999999999999998877665
Q ss_pred c---CchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 213 V---GKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 213 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
. +|+..|.+.+++.++..++.++..++
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 59998888888777766655555443
No 26
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=2.5e-21 Score=163.46 Aligned_cols=177 Identities=14% Similarity=0.126 Sum_probs=154.1
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
++++..+..++..++.+.......+.+|.+ .+++|.++++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPI-AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345666666777777777776666667775 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh-ccCc
Q psy11010 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-FVGK 215 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~-~~g~ 215 (256)
+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+ ++|+++++..+....+|..++|.+.+.+.+ ..||
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEG-KQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999999999998889999999997 899999999989999999999999888764 5799
Q ss_pred hHHHHHHHHHHHHHHhHhhh
Q psy11010 216 TAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~ 235 (256)
|+.|.+.+++.++..++.++
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF 181 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999988877765554443
No 27
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.89 E-value=3.2e-21 Score=166.51 Aligned_cols=179 Identities=11% Similarity=0.014 Sum_probs=144.2
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
+++.+....+..+...+......+..+.+ .+++|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34455555555555555555566666654 78899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh----h--
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY----Q-- 211 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~----~-- 211 (256)
++.++++++++++.++++|++.|++.+... ....+++|++|+ ++|++++|+.+....+|..+++.+...+. +
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~-~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNG-KIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcCh-hheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999988654 456789999998 99999999998777777777766665442 2
Q ss_pred ---ccCchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 212 ---FVGKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 212 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
..|||+.|++.+++.++..++.++..++
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 2489999999999888776666555433
No 28
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.89 E-value=1.5e-21 Score=165.08 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=154.0
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 143 (256)
.+....++.........|+++.++++++|.++.+.|++.+...+...+.+++.|+++||+|||++++.+.++.+++.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 34455555666667777888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHH
Q psy11010 144 AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILS 223 (256)
Q Consensus 144 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~ 223 (256)
.+.++++.+++.+++.|++.+...+...+++.|++|+ ++|++++|+.+....+|..+||.+++++. ..||++.|++.+
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~ 171 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP-HQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGA 171 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 9999999999999999999998889999999999998 99999999999999999999999999998 679999999988
Q ss_pred HHHHHHHhHhhheeec
Q psy11010 224 ALALGDGCKCNYTIVQ 239 (256)
Q Consensus 224 ~~~~~~~~~~~~~~~~ 239 (256)
+..++..++..+..|+
T Consensus 172 ~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 172 VLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhCCc
Confidence 8777665554444443
No 29
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=9.8e-22 Score=163.60 Aligned_cols=169 Identities=13% Similarity=0.114 Sum_probs=147.5
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
+...++.........+.+|.+. .+.+.++.+.+++.+++.++..+++++.|+++||+|||++++.+.++..++.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYV-LAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 3445555555656666667764 568899999999999999999999999999999999999999999998888888877
Q ss_pred hc-----hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 146 GR-----TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 146 ~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
.+ +++.+++.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..+||.+++++.+..||++.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~ 162 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE-EQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIW 162 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 76 899999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhhe
Q psy11010 221 ILSALALGDGCKCNYT 236 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~ 236 (256)
+.++..++..+..+..
T Consensus 163 ~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 163 VDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8887776655554443
No 30
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=1.7e-21 Score=168.18 Aligned_cols=171 Identities=12% Similarity=0.155 Sum_probs=151.3
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVI 135 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~ 135 (256)
++++.++.+++..+.+.+.++...+.++.|+++++|.+.++.+++.+.+.....+..+++|+++|| +|||++++.+.++
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 345567777778888888988888899999999999999999999999998888899999999999 9999999999999
Q ss_pred HHHHHHHHHhhchHHH-HHHHHHHHHhhhhchhhhhhhhhhhcccCcc--hhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 136 MFLSTLIFAFGRTYGV-LFLARSLQGIGSSCSSVSGMGMLAERYPDDR--ERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
+.++.++++++.+... ++++++++|+|.|...+...+++.|.+|+ + +|++++++++.+.++|..+||.+++++.++
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~-~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPP-KDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCC-CchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988776444 55789999999999999999999999987 5 457899999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHH
Q psy11010 213 VGKTAPFLILSALALG 228 (256)
Q Consensus 213 ~g~~~~~~~~~~~~~~ 228 (256)
.||++.|++.++..++
T Consensus 170 ~gw~~~F~i~~i~~~~ 185 (489)
T PRK10207 170 FGYSVTYNLCGAGLII 185 (489)
T ss_pred hChHHHHHHHHHHHHH
Confidence 9999999986654443
No 31
>KOG3764|consensus
Probab=99.89 E-value=4.1e-23 Score=166.32 Aligned_cols=152 Identities=53% Similarity=0.969 Sum_probs=143.5
Q ss_pred cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhh
Q psy11010 92 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGM 171 (256)
Q Consensus 92 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 171 (256)
+.+++++|++.+...+.+.+.+++.|.+.||+|+|..+++|+.++....+++++.++++.++++|.++|+|.+...+...
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 172 GMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
++++|.+|+|++|++++|+.-.+.++|..+||+.+|.+++..|++.+|++.++++++...+.++..++.+.+
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 999999998778999999999999999999999999999999999999999999999988888887764443
No 32
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=165.58 Aligned_cols=171 Identities=16% Similarity=0.172 Sum_probs=136.5
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhc---CcchhHHH---HHHHHHHHHHHhhhHHHHhhhhcCchhHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLM---GETKAVGV---MFGSKAFVQLLANPLVGILTHRVGYSLPMF 130 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~ 130 (256)
++++.+...+++.+++.++...+.... +++.++++ .+..+.+. +.+...++..++++++|+++||+|||+++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCS-LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345566666777888888888865444 45567764 44544444 444455555599999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhh
Q psy11010 131 TGFVIMFLSTLIFAFGRTYG--------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG 202 (256)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g 202 (256)
.+.++++++.+++++++++. .++++|+++|++.|...+...++++|++|+ ++|+++.++.+.+...|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVE-GRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC-CcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999887753 588899999999999999999999999998 999999999888888888888
Q ss_pred hhHHhhhh--------hccCchHHHHHHHHHHHHH
Q psy11010 203 PPFGGIMY--------QFVGKTAPFLILSALALGD 229 (256)
Q Consensus 203 ~~i~~~l~--------~~~g~~~~~~~~~~~~~~~ 229 (256)
+.+...+. +.+|||++|++.+++.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 77655443 2579999999888777664
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=6.4e-22 Score=166.11 Aligned_cols=167 Identities=21% Similarity=0.174 Sum_probs=148.4
Q ss_pred HhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHH
Q psy11010 73 NMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL 152 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
..+...+....|. +.+++|.++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++++++.+
T Consensus 7 ~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
T TIGR00893 7 YLDRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSL 85 (399)
T ss_pred HHHHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3344444444444 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 153 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 153 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
+++|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..++|.+++.+.+..+|++.|++.+++.++..++
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPA-SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCH-HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 999999999999999999999999999999999999999988888776666
Q ss_pred hhheeecCC
Q psy11010 233 CNYTIVQKS 241 (256)
Q Consensus 233 ~~~~~~~~~ 241 (256)
.++..++++
T Consensus 165 ~~~~~~~~~ 173 (399)
T TIGR00893 165 WLKFIPDPP 173 (399)
T ss_pred hhheecCCC
Confidence 665555433
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.88 E-value=1.4e-21 Score=168.97 Aligned_cols=183 Identities=16% Similarity=0.112 Sum_probs=151.8
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhh--------cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchh
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYL--------MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL 127 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~ 127 (256)
+...+......++.+..+++...+.+..+.+ ++++ +.++.+.+++.+.+.++..++++++|+++||+|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESL-NTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHH-HHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3445566667777888888888877776654 5555 888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh------------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHH
Q psy11010 128 PMFTGFVIMFLSTLIFAFG------------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGL 195 (256)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~ 195 (256)
+++.+.++..++.++++++ +.+..++++|+++|++.|...+...++++|++|+ ++|++++++.+.+.
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~ 165 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA-HIRGKLVSFNQFAI 165 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh-hhhhHHHHHHHHHH
Confidence 9999999998888877652 2246678999999999999999999999999998 99999999999999
Q ss_pred HHHHhhhhhHHhhhh--------hccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 196 ALGVLIGPPFGGIMY--------QFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 196 ~lg~~~g~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.+|..+++.+++.+. +..|||+.|++.+++.++..+. .++.|+++
T Consensus 166 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 166 IFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 999999888776543 3568999999988887776544 44556554
No 35
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=9.3e-22 Score=164.35 Aligned_cols=161 Identities=21% Similarity=0.280 Sum_probs=141.4
Q ss_pred hhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q psy11010 76 LTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLA 155 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
.....++.|. +.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.++++
T Consensus 19 ~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 19 VYTWTLLAPP-LGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred HhhhhhHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445444 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
|++.|++.+..++.....+.+++| ++|+++.++...+..+|..+++++.+.+.+..|||+.|++.+++.++..+..++
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP--DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC--cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888999986 579999999999999999887777777778889999999999888887766655
Q ss_pred eeec
Q psy11010 236 TIVQ 239 (256)
Q Consensus 236 ~~~~ 239 (256)
..++
T Consensus 176 ~~~~ 179 (377)
T TIGR00890 176 LIGY 179 (377)
T ss_pred heec
Confidence 5543
No 36
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=2.9e-21 Score=161.29 Aligned_cols=174 Identities=16% Similarity=0.184 Sum_probs=142.1
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 143 (256)
..+++.++.........++.|.++++++|.++.+.+++.+++.+++.+++++.|+++||+|||+.++.+.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 45555555566666667777766789999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh----------c
Q psy11010 144 AFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ----------F 212 (256)
Q Consensus 144 ~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~----------~ 212 (256)
++++ +++.+++.|+++|++.+. .+...++++|++|+ ++|++++++......+|..+++.+++.+.+ +
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK-KIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH-hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999 999999999999998664 45678899999998 999999999998888888888877766654 2
Q ss_pred cCchHHH-HHHHHHHHHHHhHhhheeec
Q psy11010 213 VGKTAPF-LILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 213 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (256)
.+||+.| +..+++.++..++.+...++
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 4799999 44455544444444444443
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=5.8e-21 Score=165.86 Aligned_cols=171 Identities=20% Similarity=0.281 Sum_probs=153.7
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+.+++.+..+++..++..++.....+..+.+ .+++|.++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEV-QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3456677778888888888887777666664 688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
.+++.++++++++++.+++.|++.|++.+...+...+++.|.+|+ ++|++++++......+|..++|.+.+.+.+..+|
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-HLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q psy11010 216 TAPFLILSALALG 228 (256)
Q Consensus 216 ~~~~~~~~~~~~~ 228 (256)
|+.|++.++..++
T Consensus 174 ~~~f~~~~~~~~~ 186 (496)
T PRK03893 174 RALFFIGILPIIF 186 (496)
T ss_pred HHHHHHHHHHHHH
Confidence 9999875444333
No 38
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=6.7e-21 Score=160.73 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHH
Q psy11010 63 VIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI 142 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~ 142 (256)
.+.....+..........+.+|.+ .+++|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++..++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 334444444555555555666665 6889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHH
Q psy11010 143 FAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL 222 (256)
Q Consensus 143 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~ 222 (256)
+.++++.+.+++.|+++|++.+...+...+++.|.+|+ ++|++++++.+....+|..++|.+++.+.+..||++.|++.
T Consensus 85 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 85 CSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD-RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred HHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 99999999999999999999999999999999999998 99999999999999999999999999988888999999998
Q ss_pred HHHHHHHHhHhhheeecCC
Q psy11010 223 SALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~ 241 (256)
+++.++..++.++..++++
T Consensus 164 ~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 164 AAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 8887777666555555543
No 39
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=4.8e-21 Score=165.10 Aligned_cols=173 Identities=13% Similarity=0.173 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhh--hcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKY--LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIM 136 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~~ 136 (256)
+.+..+++..+.+.+.++...+.++.|+.++ +|.+..+.+++.+.+.++..++++++|+++|| +|||+++..+.++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 3456666777778888888888999998777 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcch---hhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRE---RGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~---r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+++.++.+++++.+.+++++++.|+|.|...+...++++|++|+ ++ |+++.++++.+.++|..+||.+++++.++.
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~-~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYER-GDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCC-CCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988888888999999999999999999999999986 54 888999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHhHh
Q psy11010 214 GKTAPFLILSALALGDGCKC 233 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~ 233 (256)
||++.|.+.++..+++.+..
T Consensus 169 g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 99999999886655544433
No 40
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=6.2e-21 Score=161.02 Aligned_cols=168 Identities=14% Similarity=0.088 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
|.....+++..+... ......+.+|.. ++++|.+.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+.++
T Consensus 9 ~~~~~~~~~~~~~~~-~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 9 FMLLVLVLIGLNMRP-LLTSVGPLLPQL-RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHcch-hhhccchhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 334444444444322 234455666765 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc-CchH
Q psy11010 139 STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTA 217 (256)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~-g~~~ 217 (256)
+.++++++++++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+
T Consensus 87 ~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 87 GALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ--QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 99999999999999999999999999999999999999985 67999999999999999999999999988875 7999
Q ss_pred HHHHHHHHHHHHH
Q psy11010 218 PFLILSALALGDG 230 (256)
Q Consensus 218 ~~~~~~~~~~~~~ 230 (256)
.+.+.++..++..
T Consensus 165 ~~~~~~~~~~~~~ 177 (393)
T PRK09705 165 TLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 8877666555433
No 41
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1e-20 Score=160.10 Aligned_cols=168 Identities=18% Similarity=0.182 Sum_probs=147.6
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhch
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 148 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~ 148 (256)
..+..+....+.|..+.+ .+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++.++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 93 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAI-QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVES 93 (401)
T ss_pred HHHHHHHHHHHHhhHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 444455566666776664 6889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
++.+++.|+++|++.+...+...+++.|++|+ +++++..+.......+|..++|.+++++.++.||++.|++.+++.++
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA-QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 99999999999999888888888999999998 88999999998889999999999999999999999999998888877
Q ss_pred HHhHhhheee
Q psy11010 229 DGCKCNYTIV 238 (256)
Q Consensus 229 ~~~~~~~~~~ 238 (256)
..+..++..+
T Consensus 173 ~~~~~~~~~~ 182 (401)
T PRK11043 173 LILPTLRLKP 182 (401)
T ss_pred HHHHHHHcCC
Confidence 6665554433
No 42
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.87 E-value=8.8e-21 Score=162.90 Aligned_cols=179 Identities=19% Similarity=0.231 Sum_probs=146.5
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
.++|.++...++...........+....+. +.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKE-LQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHH-HHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 345656555555544333333333334454 4788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHH-HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 136 MFLSTLIFAFGRTYGVLFL-ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~-~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
..++.++++++++++.+++ .|++.|++.+...+...+++.++++ ++|+++.|+.+.+..+|..++|.+++.+.+..|
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~--~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 94 ASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY--RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH--hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 9999999999999888765 4689999999877777888899984 789999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhHhhhee
Q psy11010 215 KTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
||++|++.+++.++..+..++..
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988776655544443
No 43
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.87 E-value=2.8e-21 Score=166.55 Aligned_cols=185 Identities=14% Similarity=0.205 Sum_probs=153.8
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHh----------------------hhcCcchhHHHHHHHHHHHHHHh
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHK----------------------YLMGETKAVGVMFGSKAFVQLLA 112 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~~~~~~~~~~~~~~~~~~~~ 112 (256)
.+.++.....++++..+...+........+. +.+ +++.+..+.|++.+.+.+++.++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVA-MVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEE-cccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 3456666666666666655555544433332 223 68899999999999999999999
Q ss_pred hhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHH
Q psy11010 113 NPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI 190 (256)
Q Consensus 113 ~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~ 190 (256)
+++.|+++||+|+|+++..+.++..++.+++.++ .+++.+++.|+++|++.+...+....+++|++|+ ++|++++++
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~ 171 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP-KERSRLLGM 171 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCH-HHHHHHHHH
Confidence 9999999999999999999999998888877543 5577889999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHhhhhhHHhhhhhcc-CchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 191 ALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 191 ~~~~~~lg~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.+.+..+|..++|++++.+.+.. ||++.|++.+++.++..++.++..++++
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999884 9999999999888776666555554433
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.87 E-value=2.3e-21 Score=163.22 Aligned_cols=181 Identities=17% Similarity=0.223 Sum_probs=155.3
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
.+++.+...++..+..++.........|.+ .+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAI-SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 345555555556666666665555555554 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 137 FLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
.++.++..++++++.+++.+++.|++.+...+...+++.|++|+ ++|++++++.+....+|..+++.+++++.+..||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK-RFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCH-HhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 99999999999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhheeec
Q psy11010 217 APFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+.|++.+++.++..++.++..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCC
Confidence 99998876666655555555544
No 45
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.87 E-value=1.2e-20 Score=159.73 Aligned_cols=181 Identities=15% Similarity=0.116 Sum_probs=144.9
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
.++.+....+..++.........++.+.+.++++|+++++.+++.+++.+++.+.+++.|++.||+|.|+++..+.++..
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34566666666666666666666666665455899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh--
Q psy11010 138 LSTLIFAFG-----RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-- 210 (256)
Q Consensus 138 ~~~~~~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~-- 210 (256)
+..++.+++ ++++.+++.|++.|++ +..++.....+++++|+ ++||+++|+.....++|..++++++..+.
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~-~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK-AKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH-hHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999988876 7999999999999998 77888899999999998 99999999996666666655555443322
Q ss_pred ---h-------------ccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 211 ---Q-------------FVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 211 ---~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
+ ..+|+.++++..++.++..++.++..++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2 23478888888888777776766665543
No 46
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.87 E-value=9.6e-21 Score=158.58 Aligned_cols=174 Identities=16% Similarity=0.151 Sum_probs=146.5
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHH-HHHHHHHHHHHHHh
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT-GFVIMFLSTLIFAF 145 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~-~~~~~~~~~~~~~~ 145 (256)
+..++..+......|.++.++++++|.++.+.|++.+.+.+...+.+++.|+++||+|||+.++. +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 34566667777778888988888999999999999999999999999999999999999887654 56666677778888
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHH--HHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHH
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNA--MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILS 223 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~--~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~ 223 (256)
+++++.+++.|++.|.+.+...|...++..|+.|+ +.|+++ .+......++|..+||.+++.+.+..|||+.|++.+
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADR-TGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh-cchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 99999999999999888888888888899999876 677654 678888889999999999999999999999999998
Q ss_pred HHHHHHHhHhhheeecCC
Q psy11010 224 ALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~ 241 (256)
++.++..++.++..|+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHhCCCcc
Confidence 887776666666555543
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.87 E-value=2.9e-21 Score=166.14 Aligned_cols=175 Identities=15% Similarity=0.147 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHhHhhhchhhhHHHHHhhhcCc--------chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 63 VIVAIALVLDNMLLTTVEDVARENRHKYLMGE--------TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
..+.+..++..++...+.+..+.. ..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++.+.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~ 109 (481)
T TIGR00879 31 LIAAIGGLMFGYDTGVIGGALALP-AFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIAL 109 (481)
T ss_pred HHHHHHHHhcccccchhhhhhhcH-HHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHH
Confidence 334444445555555555555544 4555555 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh---chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH---hh
Q psy11010 135 IMFLSTLIFAFG---RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG---GI 208 (256)
Q Consensus 135 ~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~---~~ 208 (256)
+..++.+++.+. .+++.++++|++.|++.+...+...+++.|++|+ ++|++++++++.+..+|..+++.++ +.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 110 LFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPK-ALRGALTSLYQLAITFGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCCh-hhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 999998888553 3455889999999999999999999999999998 9999999999999999999999999 67
Q ss_pred hhhccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 209 MYQFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 209 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..+..+||+.|++.++..++..+. .++.++.
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~~~-~~~l~~~ 219 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLFLG-LFFLPES 219 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 667789999999966665554433 3444543
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.87 E-value=2.4e-20 Score=158.01 Aligned_cols=177 Identities=18% Similarity=0.249 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchh-----HHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKA-----VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
....+++..++.........+++|.+. +++|.+..+ .+++.+++.++..+++++.|+++||+|||++++.+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 93 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYV-EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH-HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHH
Confidence 344555666677777777788888875 668887554 48899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
.+++.+++.+.++++.+++.|++.|++.+ ..+....++.+.+|+ ++|++++++.+....+|..++|.+++.+.+..+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 171 (408)
T PRK09874 94 MGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPR-NKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL 171 (408)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 99999888888999999999999999765 457778889999998 9999999999999999999999999999998999
Q ss_pred hHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
++.|++.+++.++..+..++..+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999888777666665555543
No 49
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=9.9e-21 Score=158.75 Aligned_cols=164 Identities=15% Similarity=0.211 Sum_probs=148.2
Q ss_pred HhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHH
Q psy11010 75 LLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL 154 (256)
Q Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
....+.|.+|.+ .+++|.++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++
T Consensus 6 ~~~~~~p~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 6 AIDMYLPALPVI-AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 344556777876 5779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhh
Q psy11010 155 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 155 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..++|.+++.+.+..||++.|++.+++.++..+...
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPK-EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 99999999999999999999999999999999999999998888877666665
Q ss_pred heeecC
Q psy11010 235 YTIVQK 240 (256)
Q Consensus 235 ~~~~~~ 240 (256)
+..+++
T Consensus 164 ~~~~~~ 169 (377)
T PRK11102 164 FFIPET 169 (377)
T ss_pred HhCCcc
Confidence 555554
No 50
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=2.6e-20 Score=161.48 Aligned_cols=179 Identities=20% Similarity=0.213 Sum_probs=142.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchh-HHH-----HHHHHHHHHHHhhhHHHHhhhhcCchhHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKA-VGV-----MFGSKAFVQLLANPLVGILTHRVGYSLPMFTG 132 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~-----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~ 132 (256)
+..+....++.+++.++...+....+. +.++++.+... ..+ +.++..++..++++++|+++||+|||+++..+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 93 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYA-LGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 345666778888999999887666554 46776533211 122 25777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhchHHH--------HHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhh
Q psy11010 133 FVIMFLSTLIFAFGRTYGV--------LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 204 (256)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~ 204 (256)
.++++++.+++++++|+.. ++++|+++|++.|..++...++++|++|+ ++||++.++...+..+|..+|+.
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPD-RKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 78899999999999999999999999998 99999999999888888888876
Q ss_pred HHhhhh--------hccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 205 FGGIMY--------QFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 205 i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
+...+. ..+|||+.|++.+++.++..+ .....||+
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~-~~~~~~es 215 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY-LRHALEET 215 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH-HHHcCCCC
Confidence 665443 257999999997766554333 33444544
No 51
>PRK09952 shikimate transporter; Provisional
Probab=99.87 E-value=2.3e-20 Score=159.62 Aligned_cols=170 Identities=16% Similarity=0.149 Sum_probs=139.8
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhh--cCcchhHHHHH-----HHHHHHHHHhhhHHHHhhhhcCchhHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYL--MGETKAVGVMF-----GSKAFVQLLANPLVGILTHRVGYSLPM 129 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~G~r~~l 129 (256)
++++.+...++..+++.++...+..+.+..+.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34456777777888888988877666665555554 56665 45553 345566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhh
Q psy11010 130 FTGFVIMFLSTLIFAFGRTYG--------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI 201 (256)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~ 201 (256)
+.+.++++++.+++++++++. .++++|+++|++.|...+....++.|++|+ ++|++..+..+.+..+|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPK-NKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999876 488899999999999999999999999998 99999999999999999998
Q ss_pred hhhHHhhhh--------hccCchHHHHHHHHHHHH
Q psy11010 202 GPPFGGIMY--------QFVGKTAPFLILSALALG 228 (256)
Q Consensus 202 g~~i~~~l~--------~~~g~~~~~~~~~~~~~~ 228 (256)
+..+..++. +.+|||++|++.+++.++
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 887776654 257999999988777655
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.86 E-value=2.6e-21 Score=161.72 Aligned_cols=168 Identities=12% Similarity=0.085 Sum_probs=146.9
Q ss_pred HHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHH
Q psy11010 71 LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG 150 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~ 150 (256)
...++........|. +.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++..++.+++.++++++
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (379)
T TIGR00881 6 AYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLW 84 (379)
T ss_pred HHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHH
Confidence 334444444445454 5788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhh-hHHhhhhhccCchHHHHHHHHHHHHH
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP-PFGGIMYQFVGKTAPFLILSALALGD 229 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~-~i~~~l~~~~g~~~~~~~~~~~~~~~ 229 (256)
.+++.|++.|++.+...+...+++.|++|+ ++|++++++.+....+|..++| .+++.+.+..+|++.|++.+++.++.
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSR-SERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIV 163 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCH-hhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999998 9999999999999999999999 57777777889999999988887776
Q ss_pred HhHhhheeecC
Q psy11010 230 GCKCNYTIVQK 240 (256)
Q Consensus 230 ~~~~~~~~~~~ 240 (256)
.++.++..+++
T Consensus 164 ~~~~~~~~~~~ 174 (379)
T TIGR00881 164 SLICFLLLRDS 174 (379)
T ss_pred HHHHheeeCCC
Confidence 66666655543
No 53
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=2.3e-20 Score=160.31 Aligned_cols=181 Identities=11% Similarity=0.025 Sum_probs=140.6
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
.+|..+...++................| ++.++ |.++.+.+++.+.+.++..+++++.|+++||+|||++++.+.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 3444444444444444434333333444 45666 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHh-hhhhHHhhhhh
Q psy11010 137 FLSTLIFAFG----RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL-IGPPFGGIMYQ 211 (256)
Q Consensus 137 ~~~~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~-~g~~i~~~l~~ 211 (256)
+++.+++++. .+++.+++.|++.|++.+...+.....+.|++|+ ++|++++++++.+..+|.. .+|+++..+..
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9998888765 3677888999999999999888888899999998 9999999999999998864 45555444434
Q ss_pred ccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 212 FVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..|||+.|++.+++.++..++.+++.+++
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 45899999998888777666665555543
No 54
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.86 E-value=3.2e-20 Score=161.42 Aligned_cols=186 Identities=17% Similarity=0.097 Sum_probs=152.6
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhh----hcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKY----LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMF 130 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~ 130 (256)
.+.+++.+..+.++.+.++++...+....+..-.+. .+.+..+.+++.+...++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 345666777788888888898888777666542221 2345667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhch------HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhh
Q psy11010 131 TGFVIMFLSTLIFAFGRT------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 204 (256)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~ 204 (256)
.+.++..++.++++++.+ ++.++++|+++|++.|...+....+++|++|+ ++|++++++.+....+|..+++.
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK-KWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988887765 67899999999999999999999999999998 99999999999999999999998
Q ss_pred HHhhhhh-----------------------ccCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 205 FGGIMYQ-----------------------FVGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 205 i~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
++.++.. ..+||+.+.+.++..++..+. .+..||+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr 229 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPR 229 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHH
Confidence 8876532 237999998887777665444 345566544
No 55
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=5.8e-20 Score=153.61 Aligned_cols=143 Identities=12% Similarity=0.076 Sum_probs=131.4
Q ss_pred HhhhchhhhHHHHHhhhcCcchh-HHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy11010 75 LLTTVEDVARENRHKYLMGETKA-VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLF 153 (256)
Q Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
..-...++..+++.+++|+++++ .|.+.+++..++.++.++.|+++||+|.|+++..+.+.+.+..++.++++++..+.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566666778899999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 154 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 154 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
+.|++.|++.|... +...++..++|+ ++|+++.++.+.+..+|.+++++++++ ...+||++-+.
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~-kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~ 183 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPP-SRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYST 183 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHH
Confidence 99999999999999 889999999998 999999999999999999999999999 55678886543
No 56
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.85 E-value=8.3e-20 Score=158.34 Aligned_cols=171 Identities=11% Similarity=0.114 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFL 138 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~~~~ 138 (256)
+.+..+++..+.+.+.++.+.++++.|+.+++|.+.++.+++.+.+........+++|+++|| +|||+.++.+.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 345566677777778877788888999989999999999999888877767777889999999 5999999999999999
Q ss_pred HHHHHHhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc-chhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 139 STLIFAFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 139 ~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
+.+++++++ +...++++++++|++.|...+...+++.|++|++ ++|..++++++.+.++|..+||.+++++.++.||+
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~ 180 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 998888864 4566778899999999999998899999999851 23456888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy11010 217 APFLILSALALGDG 230 (256)
Q Consensus 217 ~~~~~~~~~~~~~~ 230 (256)
+.|++.++..+++.
T Consensus 181 ~~F~i~~i~~~i~~ 194 (500)
T PRK09584 181 VAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998876555543
No 57
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=7.9e-20 Score=156.25 Aligned_cols=167 Identities=20% Similarity=0.204 Sum_probs=137.1
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHH-HHH-----HHHHHHhhhHHHHhhhhcCchhHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMF-GSK-----AFVQLLANPLVGILTHRVGYSLPMF 130 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~G~r~~l~ 130 (256)
.|++....++++.+++.++...+....|. +.++++.++.+.+... +.. .++..+++++.|+++||+|||++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 35556778888999999999988777665 4788888877765433 322 2223467899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhh
Q psy11010 131 TGFVIMFLSTLIFAFGRTYG--------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG 202 (256)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g 202 (256)
.+.++..++.++++++++++ .++++|+++|++.+...+....+++|++|+ ++|++++++.+....+|..++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~~~~~g~~~g 169 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP-GRKGFYTSWQSASQQVAVVFA 169 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc-ccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876 368899999999999999889999999998 999999999998888888888
Q ss_pred hhHHhhhh--------hccCchHHHHHHHHH
Q psy11010 203 PPFGGIMY--------QFVGKTAPFLILSAL 225 (256)
Q Consensus 203 ~~i~~~l~--------~~~g~~~~~~~~~~~ 225 (256)
+.+++.+. +..|||+.|++..+.
T Consensus 170 ~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 170 ALLGYLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 88777652 467999999875443
No 58
>PRK10133 L-fucose transporter; Provisional
Probab=99.85 E-value=2.6e-19 Score=153.04 Aligned_cols=151 Identities=14% Similarity=0.189 Sum_probs=130.4
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
....+..+.++.++..+......+..|.+ ++++|.++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34455556666666666766666666765 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---HhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh
Q psy11010 138 LSTLIF---AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY 210 (256)
Q Consensus 138 ~~~~~~---~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~ 210 (256)
++.+++ .++++++.++++|+++|+|.+...+..++++.|..++ ++|.+.+++.+....+|..++|.+++.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~-~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 4678999999999999999999999999999998765 77777899999999999999999887543
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.85 E-value=1e-19 Score=153.61 Aligned_cols=170 Identities=21% Similarity=0.215 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 143 (256)
.+++..++..++...+....+.. .++++.++.+.+++.+.+.+.+.+++++.|+++||+|||++++++.++.+++.+++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 34555555555444444444444 57788899999999999999999999999999999999999999999999888877
Q ss_pred HhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHH
Q psy11010 144 AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILS 223 (256)
Q Consensus 144 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~ 223 (256)
.++.+. ++.|+++|++.+...|...+++.|++|+ ++|++++++.+....+|..+||.++|++.+. .|+..+.+.+
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~-~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~ 160 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPG-EKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCA 160 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 776554 6789999999999999999999999998 9999999999999999999999999999885 4777777666
Q ss_pred HHHHHHHhHhhheeecC
Q psy11010 224 ALALGDGCKCNYTIVQK 240 (256)
Q Consensus 224 ~~~~~~~~~~~~~~~~~ 240 (256)
...++..+ ..+..|+.
T Consensus 161 ~~~~~~~~-~~~~l~~~ 176 (393)
T PRK11195 161 LIYLLAAL-FNLFIPRL 176 (393)
T ss_pred HHHHHHHH-HHhcCCCC
Confidence 55444333 33444443
No 60
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.85 E-value=1.7e-19 Score=151.68 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+..+++..++.........+.+|.+. +++|.+..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWL-AQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777888888888888875 6789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
++++++++++.++++|+++|++.+...+...+.+.+..++ ++|+++++.++....+|..+||.+++.+.+...+.
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 86 AGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS-RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Confidence 9999999999999999999999999888888888899987 89999999999999999999999999987754333
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.84 E-value=2.5e-19 Score=151.82 Aligned_cols=171 Identities=10% Similarity=0.120 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
+..++...+..++......++.|.+ ++++|.+..+.|++.+.+.+++.+++++.|++.||+|||++++.+.++++++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4455566666666666666777765 789999999999999999999999999999999999999999999999999988
Q ss_pred HHHh---hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc------
Q psy11010 142 IFAF---GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------ 212 (256)
Q Consensus 142 ~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~------ 212 (256)
++.. .++++.+++.+++.|+|.|...+..++++.+..|+ ++|++.+++.+...++|..++|.+++.+...
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPE-STATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 7644 45788999999999999999999999999999997 8999999999999999999999999877422
Q ss_pred --------------------cCchHHHHHHHHHHHHHHhHhh
Q psy11010 213 --------------------VGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 213 --------------------~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
.+||++|++.+++.++..++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999998887776554443
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.84 E-value=3.4e-19 Score=150.91 Aligned_cols=177 Identities=14% Similarity=0.150 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
+.+....++.+..........+..++++ +++|.++.+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 3444455555554455444455666665 678999999999999999999999999999999999999999999988888
Q ss_pred HHHHH---h-hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHH-hhhhhHHhhhhhccC
Q psy11010 140 TLIFA---F-GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV-LIGPPFGGIMYQFVG 214 (256)
Q Consensus 140 ~~~~~---~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~-~~g~~i~~~l~~~~g 214 (256)
.+++. . .++++.+++.|++.|++.+...+...+.+.+.+|+ ++|++++|+++...++|. .++|.+++++.+..|
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-DNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 76542 3 25778888899999999988888888889999998 999999999999999996 689999999998888
Q ss_pred chHHHHHHHHHHHHHHhHhhheee
Q psy11010 215 KTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
|+..++......++..++.++..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 171 EMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccC
Confidence 766655544443333333333333
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.83 E-value=2e-19 Score=153.93 Aligned_cols=180 Identities=12% Similarity=0.068 Sum_probs=144.5
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
++..+....+................| ++++ .|.++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 344444444544444444444443444 4444 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh----chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh-c
Q psy11010 138 LSTLIFAFG----RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-F 212 (256)
Q Consensus 138 ~~~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~-~ 212 (256)
++.+++.+. +++..+.+.|++.|++.+...+.....+.|++|+ ++|++++++++....+|..+++.+.+...+ .
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQ-SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCc-ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 988877654 4667778889999999999999889999999998 999999999999999999999888776444 5
Q ss_pred cCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 213 VGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
.+||+.|++.+++.++..++.++..+++
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 6899999998888887666666555543
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=3.5e-19 Score=147.22 Aligned_cols=168 Identities=25% Similarity=0.408 Sum_probs=151.1
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
+.+..+..........+..+.+ .+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.++..++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLL-AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 4455556666777777777776 467799999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHH
Q psy11010 145 FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSA 224 (256)
Q Consensus 145 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~ 224 (256)
+.++++.+++.|++.|++.+...+...+++.|++|+ ++|++.+++.+....+|..++|.+++.+.+..+|++.+++.++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP-KERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCc-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999899999999888
Q ss_pred HHHHHHhHhh
Q psy11010 225 LALGDGCKCN 234 (256)
Q Consensus 225 ~~~~~~~~~~ 234 (256)
+.++..+...
T Consensus 162 ~~~~~~~~~~ 171 (352)
T cd06174 162 LGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHH
Confidence 8777655543
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.83 E-value=1e-18 Score=147.54 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHH-HHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM-FTGFVIMFLSTLI 142 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l-~~~~~~~~~~~~~ 142 (256)
...+..++.........|.++.++.+++|.+++++|++.+...+...+.+++.+.+.||+|||+.+ ..+.++.+++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~ 98 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTL 98 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 344446666777777788889998999999999999998876665454444544449999999875 4556666677777
Q ss_pred HHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchh--hHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 143 FAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 143 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r--~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
.+++++++.+++.+.+.|...+...+...+++.++.++ +.| +...++.+.+.++|.++||++++.+.++.|||..|+
T Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~ 177 (393)
T PRK15011 99 FAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADK-TGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYL 177 (393)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHH
Confidence 88888888877666555555566778888888888765 544 345678889999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhheeecCC
Q psy11010 221 ILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+.+++.++..+..++..|+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 178 SAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHhhcCccC
Confidence 998888777666666566543
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=9.3e-20 Score=155.03 Aligned_cols=165 Identities=14% Similarity=0.074 Sum_probs=137.6
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh---
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF--- 145 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~--- 145 (256)
.++..+.........|.+ .++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+....
T Consensus 26 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 444444445555556665 4667789999999999999999999999999999999999999888777776655432
Q ss_pred --hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHH
Q psy11010 146 --GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILS 223 (256)
Q Consensus 146 --~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~ 223 (256)
.++++.+++.+++.|++.+...+...+++.|++|+ ++|+++.++.+....+|..+||.+++.+.+..+|++.|++.+
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR-ENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH-HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 46788888999999999998889889999999998 999999999999999999999999999999889999999887
Q ss_pred HHHHHHHhHhhh
Q psy11010 224 ALALGDGCKCNY 235 (256)
Q Consensus 224 ~~~~~~~~~~~~ 235 (256)
+..++..+..+.
T Consensus 184 ~~~~~~~~~~~~ 195 (417)
T PRK10489 184 AGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHHHHh
Confidence 777665554433
No 67
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.83 E-value=8.1e-19 Score=150.08 Aligned_cols=174 Identities=13% Similarity=0.141 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-CchhHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMF 137 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~~~~~~~ 137 (256)
.+.+..+++..+...+.++....+++.|+.+++|.++.+.+.+.+.+.....++.+++|+++||+ |||++++.+.++..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 34455666667777777777778888898888999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcc--hhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 138 LSTLIFAFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDR--ERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
++.++++..+ +...++++..+.++|.|...+...++++|.+|+ + +|.+++++.+...++|+.++|.+.+++.+..|
T Consensus 88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~-~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G 166 (493)
T PRK15462 88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEP-TDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS 166 (493)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCC-CCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 9987776543 223344555566677777778778999999987 4 79999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhHh
Q psy11010 215 KTAPFLILSALALGDGCKC 233 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (256)
|++.|.+.++..+++.+..
T Consensus 167 w~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 167 WAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999998776555544443
No 68
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.83 E-value=3.2e-19 Score=154.29 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=130.9
Q ss_pred HHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhh
Q psy11010 85 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS 164 (256)
Q Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 164 (256)
.++..++|-+ ....|+.+...++..++.++.|+++|.||||.+++.+.++..+|.++++.++|...++++..+.|+|.|
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG 146 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAG 146 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhH
Confidence 3567888854 577899999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 165 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..... ...++|..|. |.|+.+.++.....-+....++.++..+..+.+|||.|++..++..+.+++.++++.++
T Consensus 147 ~~~~~-~~~isEl~p~-k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 147 VQELA-ALAISELVPN-KWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHHHH-HHHHHHhccc-chhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77654 6668999998 99998888777766666667888887777777999999999998888776665555443
No 69
>KOG2532|consensus
Probab=99.83 E-value=1e-19 Score=154.86 Aligned_cols=154 Identities=22% Similarity=0.250 Sum_probs=142.2
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhhhhch
Q psy11010 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCS 166 (256)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~ 166 (256)
.+++.++.+.+++.+.++.|+.+++++.|++.||+|.|+++..+.++.+++.++...+. +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 36788999999999999999999999999999999999999999999999999998765 4457789999999999999
Q ss_pred hhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-cCchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 167 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 167 ~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
+|+...+.++|.|+ ++|++..++...+..+|.+++-+++|++.+. .||++.|++.+++.++..++.+++..++|.+
T Consensus 146 ~pa~~~i~~~W~P~-~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 146 FPAIGSILAKWAPP-NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HhhhhceeeeECCH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999 9999999999999999999999999999998 9999999999999999888877776665554
No 70
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.82 E-value=1.8e-19 Score=159.75 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=140.0
Q ss_pred HHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy11010 68 ALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR 147 (256)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~ 147 (256)
..+............++. ++++++++.++.|++.+.+.+++.++.++.+++.||+|||+++.++.++++++.+++++.+
T Consensus 41 ~~~~~~~~~g~~~~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHHHHHHHHHHHHhhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 344444334444444444 5889999999999999999999999999999999999999999999999999999887653
Q ss_pred ---------------------------------------------------hHHHHHHHHHHHHhhhhchhhhhhhhhhh
Q psy11010 148 ---------------------------------------------------TYGVLFLARSLQGIGSSCSSVSGMGMLAE 176 (256)
Q Consensus 148 ---------------------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 176 (256)
.+..++++|+++|+|.+..++...+++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 14457789999999999999999999999
Q ss_pred cccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc----------------------CchHHHHHHHHHHHHHHhHhh
Q psy11010 177 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV----------------------GKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 177 ~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~ 234 (256)
++|+ ++|++++++++....+|..+|+++++++.+.+ +|+..|++.+++.++..+..+
T Consensus 200 ~~~~-~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 200 FAKS-KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred cCCc-cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 99999999999999999999999999887542 267778888888777665544
Q ss_pred hee
Q psy11010 235 YTI 237 (256)
Q Consensus 235 ~~~ 237 (256)
++.
T Consensus 279 ~~p 281 (633)
T TIGR00805 279 FFP 281 (633)
T ss_pred hCc
Confidence 433
No 71
>TIGR00898 2A0119 cation transport protein.
Probab=99.81 E-value=3.2e-19 Score=155.35 Aligned_cols=150 Identities=17% Similarity=0.108 Sum_probs=135.9
Q ss_pred HHhhhcCc---chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhh
Q psy11010 87 RHKYLMGE---TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS 163 (256)
Q Consensus 87 ~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 163 (256)
+.++++++ +.+.+++.+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+++.|++.|++.
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~ 194 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGI 194 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhc
Confidence 46789998 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 164 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 164 g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+...+...+++.|++|+ ++|+++.++...+..+|.+++|.++..+.+ ||+.|++.+++.++..+.. +..||++
T Consensus 195 ~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 195 GGIWVQAVVLNTEFLPK-KQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESP 267 (505)
T ss_pred cchHHHHHHHhheecCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence 99999999999999998 999999999999999999999998877654 9999999988877765555 4455543
No 72
>KOG2533|consensus
Probab=99.80 E-value=7.8e-19 Score=149.95 Aligned_cols=182 Identities=18% Similarity=0.161 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
.++..+++..+....+-..+......-+.++.+....+.+.+.+++.++++++.++.+.|.||++..+.+....+++.+.
T Consensus 45 ~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 45 FILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 34444455555555554444333222245788889999999999999999999999999999999888888888888888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh------cc
Q psy11010 140 TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------FV 213 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~------~~ 213 (256)
.++....+|++.+++.|++.|+.++..+|....+++.|+.+ ++|+..+|++.+...+|.++|.+++..+.+ ..
T Consensus 125 ~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~-~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 125 GFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGK-SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcCh-hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 87777799999999999999999999999999999999998 999999999999999999999999988643 35
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
||||.|++.++++++..++.++.+|+.+.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChh
Confidence 89999999999999999999998887765
No 73
>PTZ00207 hypothetical protein; Provisional
Probab=99.80 E-value=1.5e-17 Score=144.59 Aligned_cols=179 Identities=15% Similarity=0.134 Sum_probs=140.7
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
.++|..+....+.....+..+. + ++..+.+++++|++..+.+++.++. .....++++.|++.||+|+|++++++.++
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~-f-sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYA-F-NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 4566666555555544433332 2 2334446889999999999998874 44556788899999999999999999999
Q ss_pred HHHHHHHHHhh------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhh-hhhHHhh
Q psy11010 136 MFLSTLIFAFG------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI-GPPFGGI 208 (256)
Q Consensus 136 ~~~~~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~-g~~i~~~ 208 (256)
..++.++++++ ++++.+++.|++.|+|.+...+.....+.+++| ++||++.|+...+.++|..+ +++..++
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp--~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP--SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 689999999999999999999988999999996 68999999999999999976 4444444
Q ss_pred hhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 209 MYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 209 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+. .+|+..|++.+++.++..++.+.+.++++
T Consensus 179 ~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 179 FS--DNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HH--HhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 43 36888888888888887777776665543
No 74
>KOG0254|consensus
Probab=99.79 E-value=4.9e-18 Score=148.06 Aligned_cols=144 Identities=19% Similarity=0.248 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAE 176 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 176 (256)
+.+++.+...++..+++++.|+++|++|||+.++.+.++..++.+++++++|..+++++|++.|+|.|......+.+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-cCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 177 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 177 ~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
..|+ +.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.|++++
T Consensus 170 iap~-~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 170 IAPA-HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred cCCh-hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 9998 9999999999999999999995544444332 48999999988888887776 666776554
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=4.8e-18 Score=141.53 Aligned_cols=149 Identities=17% Similarity=0.170 Sum_probs=129.7
Q ss_pred hhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q psy11010 77 TTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 156 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
....+++|.+ .+++|.++++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+.+ ..++.+.+++.|
T Consensus 17 ~~~~~~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 17 TSVGPLLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred ccCcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 4455666765 78899999999999999999999999999999999999999999998888887777 678888899999
Q ss_pred HHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc--CchHHHHHHHHHHHHH
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGD 229 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~--g~~~~~~~~~~~~~~~ 229 (256)
++.|++.+...+....++.|++| ++|++++++++....+|..+++.+++.+.+.. +||+.|.+.+++.++.
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP--QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999888888888899885 68999999999999999999999999888765 3999888776655443
No 76
>KOG2615|consensus
Probab=99.79 E-value=2e-18 Score=138.70 Aligned_cols=121 Identities=26% Similarity=0.384 Sum_probs=110.9
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhh
Q psy11010 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 168 (256)
+..+.+..-.|.+.+.+.++..+.++.+|.++||+|||++++.+++..++..++.+.+.|+..++++|++.|+..|-...
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v 140 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV 140 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH
Confidence 33445667889999999999999999999999999999999999999999999999999997777779999998886655
Q ss_pred hhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 169 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
. .++++|.+++ ++|+.+++.+++.+++|.++||+++|++.+
T Consensus 141 ~-rAiisdV~se-k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 141 I-RAIISDVVSE-KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred H-HHHHHhhcCh-hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4 8999999998 999999999999999999999999999987
No 77
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=3.1e-18 Score=139.72 Aligned_cols=183 Identities=19% Similarity=0.140 Sum_probs=151.7
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
+..++.+.+..++..+.........++ ...+.+++|+|+.|.+++.++..+...+..++.|.+.||||.|++...+.++
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l-~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPL-GVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 334455555555554444444444344 4445799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhch---HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 136 MFLSTLIFAFGRT---YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 136 ~~~~~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
..+-.+..+++.+ ++++++++++.|++.+ .+....+.++++||+ +++|.++|++. ..++|..+...++..+...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~-~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPK-EKQGLALGIAG-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCCh-hhhhHHHHHhc-cccccHHHHHHHHHHHHHH
Confidence 9999998888654 4599999999999654 566678999999998 99999999999 8999999999999988888
Q ss_pred cC---chHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 213 VG---KTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 213 ~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.| |+.+..+..+..++..+..++...+.+.
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 88 9999999999988888888877766554
No 78
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.79 E-value=3.2e-17 Score=138.46 Aligned_cols=156 Identities=17% Similarity=0.100 Sum_probs=129.4
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (256)
+....|.++++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 33456777788899999999999888888888899999999999999998887766666555555556777777788888
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
.+++.+...+....+..|.+|+ +|++++++++....+|..++|.++|.+.++.||+..|++.+++.++..+..++.
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~--~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG--QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8888887777777888999874 599999999999999999999999999999999999998888877766655543
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.78 E-value=1.2e-17 Score=142.02 Aligned_cols=145 Identities=19% Similarity=0.238 Sum_probs=126.0
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHHHhhhhchhhhhh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSLQGIGSSCSSVSGM 171 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~ 171 (256)
...+.+.++..+..+++.++.|+++||+|+|+++..+.++.+++..+..... +.+.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999988877666532 235567789999999998888889
Q ss_pred hhhhhcccCcchhhHHHHHHH-HHHHHHHhhhhhHHhhhhhc------cCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 172 GMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQF------VGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~~~-~~~~lg~~~g~~i~~~l~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.++.|.+|+ ++|++++|+.+ ...++|..+||.++|++.++ .||+.+|.+.+++.++..++.+++.+++.
T Consensus 331 ~~i~~~~p~-~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 331 VFVEKEVPV-HIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHCCH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999998 99999999997 67889999999999999987 46999999998888888888777776553
No 80
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.77 E-value=6.1e-18 Score=121.50 Aligned_cols=136 Identities=41% Similarity=0.716 Sum_probs=122.6
Q ss_pred HHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc
Q psy11010 102 FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD 181 (256)
Q Consensus 102 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~ 181 (256)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....++.+.+.+.+++.|++.+...+...+++.|.+|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP- 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh-
Confidence 3456778889999999999999999999999999999988888888999999999999999999999999999999998
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheee
Q psy11010 182 RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 182 ~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
++|++..++.+....+|..++|.+.+.+.+..+|++.+++.+++.++..+..++..|
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999899999999988888777666665543
No 81
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.76 E-value=3e-17 Score=137.14 Aligned_cols=148 Identities=12% Similarity=0.091 Sum_probs=126.7
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY--GVLFLARSL 158 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l 158 (256)
...+++ .+++|.++.+.+++.+...++..+++++.|++.||+|||+.+..+.++.+++.++..+.++. ..+++..++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 226 GLYKPY-GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344555 46688888889999999999999999999999999999999999998888888777766532 334456778
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHH
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 230 (256)
.|++.+...+...+++.|.+|+ ++|+++.|+.+....+|..++|.+.+.+.++.||++.|.+.+++.+++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGP-ANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhccchhccHHHHHHHhhh-hhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 8888888888888899999998 9999999999999999999999999999999999999998887776643
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.76 E-value=1e-17 Score=142.63 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=130.4
Q ss_pred cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhh
Q psy11010 92 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGM 171 (256)
Q Consensus 92 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 171 (256)
+.+..+.|++.++..++..++.++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999999999999999888888888999888899999999888888888
Q ss_pred hhhhhcccCcchhhHHHHH-HHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 172 GMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~-~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.++.|.+|+ +.|++..+. ++....+|.+++|.+.|++.+..||+.+|.+.+++.++..++.++..++++
T Consensus 338 ~~~~~~~~~-~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDV-RLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCc-cceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999998 899888766 678889999999999999999999999999988888776666665554443
No 83
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.76 E-value=8.3e-17 Score=136.95 Aligned_cols=169 Identities=17% Similarity=0.109 Sum_probs=142.7
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (256)
.....|.+.++.+|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+...++.++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34456777766689999999999999999999999999999999888888888888888888888888888777788888
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheee
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
.|++.+...+...+++.|..|+ +.||+++|+++....+|..+||.+.|++.+..|++..++..++..++..++.....+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPD-EMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9998888888888999999997 999999999999999999999999999999999998998888777776666666655
Q ss_pred cCCCCccccc
Q psy11010 239 QKSSSHDRNI 248 (256)
Q Consensus 239 ~~~~~~~~~~ 248 (256)
+.++.++++.
T Consensus 401 ~~~~~~~~~~ 410 (417)
T PRK10489 401 ELRRFRQTPP 410 (417)
T ss_pred cccccccccc
Confidence 5444443333
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.75 E-value=6.3e-17 Score=153.46 Aligned_cols=142 Identities=15% Similarity=0.074 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHH---HHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT---GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMG 172 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 172 (256)
...++..+++.+.+.++++++|+++||+|||+++.. ..++..+..+.....++++.++++|+++|++.+...|...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888999999999999999999999999997633 22222222223333478999999999999999999999999
Q ss_pred hhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 173 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 173 ~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
++.+++|+ ++|++++|+.+.+..+|.++||.++|++.+..+|++.|+..+++.++..+ ..+..++
T Consensus 132 ~l~~~~~~-~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 196 (1140)
T PRK06814 132 ILPDHLNK-DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL-ASLFIPK 196 (1140)
T ss_pred hhHhhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HHhhCCC
Confidence 99999998 99999999999999999999999999999999999998554444444333 3333443
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.75 E-value=7.1e-17 Score=136.48 Aligned_cols=174 Identities=14% Similarity=0.132 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
++.+....++.......+.|+++.++.+++|.++.+.+++.+++.++..+++++.|+++||+|||+.++.+.+..+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444555566666677788999998888999999999999999999999999999999999999999887666655443
Q ss_pred HH---Hhhc-----hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 142 IF---AFGR-----TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 142 ~~---~~~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
.. .+.+ ....+++.+++.|++.+...+....+..|.. ++++...|......++|..+||.+++.+.+ .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~ 159 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS---RNSNFEYGKARMFGCVGWALCASIAGILFS-I 159 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh---hhcccccchhhhhcccHHHHHHHHHhhhhc-c
Confidence 22 1111 2334456678888888888888777777753 334567778888889999999999998866 5
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+|+..|++.+++.++..++.+...++
T Consensus 160 ~~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 160 DPQIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999888888766655544443
No 86
>KOG0255|consensus
Probab=99.75 E-value=1.6e-17 Score=145.30 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=133.6
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhh
Q psy11010 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 168 (256)
+....+.....+..+++.+|..+|.+++|.++||+|||+++++++++..++.++.++++|++.+++.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 55677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 169 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
....+++|++++ ++|+.+..+ ......++.+++..++++.. +||+.+++..++.++..++ +++.+|.+
T Consensus 191 ~~~~~~~E~~~~-~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 191 VGFGLVAEIVSP-KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HhHhhheeecCc-chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 999999999998 999999999 77777778888888888887 8999999999988876555 44444544
No 87
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.75 E-value=2.6e-16 Score=131.75 Aligned_cols=153 Identities=18% Similarity=0.080 Sum_probs=129.5
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
...+.++.+++|.++.+.+++.+...+...++.++.|++.||+|||+++..+.++..+......+.++.+.+.+.+++.|
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888999999999988888888888999999999999999998887776666666666677777778888999
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
++.+...+....++.|..|+ ++++++++++....+|..++|.++|.+.+..||+..|++.+++.+++.++..+
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPG--RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99998888888899999874 56799999999999999999999999999999999999988887776665443
No 88
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.75 E-value=2.7e-16 Score=133.03 Aligned_cols=156 Identities=18% Similarity=0.129 Sum_probs=131.0
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (256)
.....+.+.. +.|. ...++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++..++
T Consensus 235 ~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 235 IATFITLYYA-ARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHH-Hccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3344555543 3454 345677788889999999999999999999999999988888888888888888888888999
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheee
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
.|++.+..++.....+.|.+|+ ++|+++.|+++....+|..+++.+.|++.++.||++.|++.+++.+++.+..++..+
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPP-QNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999888888888899997 999999999999999999999999999999999999999988888887666555433
No 89
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.75 E-value=2.7e-16 Score=132.34 Aligned_cols=167 Identities=13% Similarity=0.115 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
++...+..++.......+....+.++ ++.|.++.++|.+.++..++..+..++.+++.||+|+|+.+..+.++..+..+
T Consensus 207 ~~~~l~~~~l~~~~~~~~~~~~~~~l-~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~ 285 (382)
T TIGR00902 207 NLRFLAAVCLIQGAHAAYYGFSAIYW-QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWA 285 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 33333444444444555556677776 45899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHH-HHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 142 IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~-~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
+.++.++.+.+++.+++.|+..+...+....++.+. |+ ++|+++.++++ ...++|..+||.++|++.|+.|+ ..|+
T Consensus 286 ~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~-~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~ 362 (382)
T TIGR00902 286 IIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG-SEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFV 362 (382)
T ss_pred HHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHH
Confidence 999999999999999999999999999999999998 87 89999999986 57789999999999999999986 6788
Q ss_pred HHHHHHHHHHhH
Q psy11010 221 ILSALALGDGCK 232 (256)
Q Consensus 221 ~~~~~~~~~~~~ 232 (256)
+.+++++++.++
T Consensus 363 ~~~~~~~~~~~~ 374 (382)
T TIGR00902 363 FMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHH
Confidence 888887765444
No 90
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.75 E-value=1e-16 Score=152.09 Aligned_cols=148 Identities=14% Similarity=0.088 Sum_probs=117.4
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCc--chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGE--TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
.+++..++..+........+..++..+++.+ ....+++.+++.++..++++++|+++||+|||++++++.++.++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~ 92 (1146)
T PRK08633 13 PLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTL 92 (1146)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHH
Confidence 3334444433333333333333344455554 34579999999999999999999999999999999988876655554
Q ss_pred HH---HhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 142 IF---AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 142 ~~---~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
+. ...++++.++++|+++|++.+...+...+++.|++|+ ++|++++|+.+.+..+|.++|+.+++++.+.
T Consensus 93 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 93 LIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK-ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc-ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 3457889999999999999999999999999999998 9999999999999999999999999999876
No 91
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.75 E-value=2.9e-16 Score=136.33 Aligned_cols=170 Identities=14% Similarity=0.138 Sum_probs=126.4
Q ss_pred HHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHH---HHhhc
Q psy11010 71 LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI---FAFGR 147 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~---~~~~~ 147 (256)
.....++......|.++++.+|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...++
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334445555567788887788988888888888889999999999999999999999988877654433322 22344
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHH
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALA 226 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 226 (256)
+...+++++++.|++.+........++.|.+|+ +.|++++|+.+....+++.++|.+.+++.+..+ |+.++++..+.+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~-~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPT-HIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 567777888888888777777778889999998 999999998544455667789999999887654 777777666666
Q ss_pred HHHHhHhhheeecCCC
Q psy11010 227 LGDGCKCNYTIVQKSS 242 (256)
Q Consensus 227 ~~~~~~~~~~~~~~~~ 242 (256)
++..+..++ .||+++
T Consensus 420 ~i~~~~~~~-~pes~~ 434 (490)
T PRK10642 420 VIGLITGVT-MKETAN 434 (490)
T ss_pred HHHHHHHHH-hccccC
Confidence 665555444 465544
No 92
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.75 E-value=5.5e-17 Score=136.30 Aligned_cols=160 Identities=20% Similarity=0.192 Sum_probs=122.8
Q ss_pred HHhHhhhchhhhHHHHHhhh-cCcchhHHHHHHH-----HHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 72 DNMLLTTVEDVARENRHKYL-MGETKAVGVMFGS-----KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
+.++.+.+....+...++.+ +.++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 84 (394)
T TIGR00883 5 EWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 34444444444333333332 2445555555443 23333468899999999999999999999999999999999
Q ss_pred hchHH--------HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh-------
Q psy11010 146 GRTYG--------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY------- 210 (256)
Q Consensus 146 ~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~------- 210 (256)
++++. .+++.|+++|++.+...+...+++.|++|+ ++|++..++.+.+..+|..+++.++..+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 85 LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP-GKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 88764 478899999999999999999999999998 99999999999999999999998877653
Q ss_pred -hccCchHHHHHHHHHHHHHHhH
Q psy11010 211 -QFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 211 -~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
+..+||+.|++.+++.++...+
T Consensus 164 ~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 164 LLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred hhccchHHHHHHHHHHHHHHHHH
Confidence 3568999998877776654433
No 93
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.75 E-value=1.1e-16 Score=138.17 Aligned_cols=174 Identities=13% Similarity=0.057 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.++..++..++............|.|+++++|.+..+.++..+...++..++.++.|+++||+|||+.+.....+..++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 34445555555455555555678888888899999999999999999999999999999999999988766544444333
Q ss_pred H--HHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHH-HHhhhhhHHhhhhh------
Q psy11010 141 L--IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLAL-GVLIGPPFGGIMYQ------ 211 (256)
Q Consensus 141 ~--~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~l-g~~~g~~i~~~l~~------ 211 (256)
. .....++...+.+.+++.|++...........+.|.+|+ ++||++.|+.+....+ |..++|.+.|++.+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~-~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 339 TLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK-KAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 2 223345565666777778865443333334677799998 9999999999988886 77999999999999
Q ss_pred ------ccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 212 ------FVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 212 ------~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
..||+..|++.++..+++.+..++
T Consensus 418 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 418 PIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 578999999988877776655544
No 94
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.74 E-value=1.5e-16 Score=133.80 Aligned_cols=159 Identities=13% Similarity=0.033 Sum_probs=126.6
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH-HHHHHH-HH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV-IMFLST-LI 142 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~-~~~~~~-~~ 142 (256)
+.+..+..........|++|.++ +++|.+.+++|++.+.+.+...++++++|.++||+||++....... ...+.. ..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~ 87 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF 87 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 34445555566677788889886 6789999999999999999999999999999999998544322211 111111 23
Q ss_pred HHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHH
Q psy11010 143 FAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL 222 (256)
Q Consensus 143 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~ 222 (256)
+..+++++.+++.|+++|.+.+...|...++..++ + ++|++..|......++|..++|++++++.++.|||..|++.
T Consensus 88 ~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~-~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 88 SAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--Q-KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--H-HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 34678899999999999999988888888887664 3 78899999999999999999999999999999999999887
Q ss_pred HHHHH
Q psy11010 223 SALAL 227 (256)
Q Consensus 223 ~~~~~ 227 (256)
....+
T Consensus 165 ~~~~~ 169 (382)
T TIGR00902 165 TAGLA 169 (382)
T ss_pred HHHHH
Confidence 65533
No 95
>PRK03699 putative transporter; Provisional
Probab=99.74 E-value=2.1e-16 Score=133.58 Aligned_cols=167 Identities=13% Similarity=0.017 Sum_probs=135.8
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
.+..++.......+....|.++++++|.+..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+..++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 290 (394)
T PRK03699 211 AIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 33333333344445567788888889999999999999999999999999999999999999998888777777666666
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHH
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 225 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~ 225 (256)
.++.+.+.+..++.|++.+..++...++..|..| +++++..+.......+|..++|.+.|++.+..|++..+++.+++
T Consensus 291 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 291 TDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK--VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGL 368 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHH
Confidence 7777677777788899888888888888888776 45677888888888999999999999999999999999988887
Q ss_pred HHHHHhHhh
Q psy11010 226 ALGDGCKCN 234 (256)
Q Consensus 226 ~~~~~~~~~ 234 (256)
.+++.+...
T Consensus 369 ~~~~~~~~~ 377 (394)
T PRK03699 369 YAVVFVMCI 377 (394)
T ss_pred HHHHHHHHH
Confidence 777655433
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.74 E-value=2.4e-16 Score=133.51 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=138.8
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-----Cchh-HHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSL-PMFTGFVIMFL 138 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~-~l~~~~~~~~~ 138 (256)
....++.++.........+|.+++ +.|.+.+++|++..+... .+.++++|+++||+ |||+ .+..+.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 344556667777777788888875 569999999999777775 58999999999999 8765 67888888877
Q ss_pred HHHHHHhh---chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-cC
Q psy11010 139 STLIFAFG---RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VG 214 (256)
Q Consensus 139 ~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~-~g 214 (256)
+..++.+. .+++.+++..++.+++.+...+...+++.|++|+ ++|+++.++...+..+|..+++.+++.+.+. .|
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~-~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g 159 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP-EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG 159 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC
Confidence 77777765 3567777777788888888899999999999998 9999999999999999999999999999885 59
Q ss_pred chHHHHHHHHHHHHHHhHhhheeec
Q psy11010 215 KTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
||..|++.+++.++..+.. +..++
T Consensus 160 w~~~f~i~a~~~l~~~l~~-~~~~e 183 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALTT-LWAPE 183 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999888777655543 33443
No 97
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.74 E-value=2.7e-16 Score=136.27 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-----CchhH-HHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLP-MFTGFVI 135 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~-l~~~~~~ 135 (256)
...+++..+..+.......+.+|.++ ++.|.+.++++.. +.....+ ++++++|+++||+ |||+. +..+.+.
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l-~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~ 90 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWM-TVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLL 90 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHH
Confidence 44455555556666666777778775 5568898888886 3333443 5899999999999 99885 5677777
Q ss_pred HHHHHHHHHhh---chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh-
Q psy11010 136 MFLSTLIFAFG---RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ- 211 (256)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~- 211 (256)
.+++...+++. ++++.+.+.+++.+++.+...+...+++.|++|+ ++|+++.++...+..+|..+++.+++++.+
T Consensus 91 ~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~-~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 91 LLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA-EERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777776664 4677888899999999999999999999999998 999999999999999999999999999998
Q ss_pred ccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 212 FVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..|||..|++.+++.++..+..++ .+++
T Consensus 170 ~~GWr~~f~i~a~l~ll~~l~~~~-~~e~ 197 (491)
T PRK11010 170 YLGWQGMYWLMAALLIPCIIATLL-APEP 197 (491)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 579999999998887776555444 4443
No 98
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.74 E-value=9.7e-17 Score=135.95 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=133.2
Q ss_pred hhchhhhHHHHHhhhcCcc---hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy11010 77 TTVEDVARENRHKYLMGET---KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLF 153 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
....+..+.+..+..+... ...+.+.++..++..++.++.|+++||+|||+.+..+.++..++.+...+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344556666554333222 1345667777888889999999999999999999999888888877777777888888
Q ss_pred HHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHh
Q psy11010 154 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKC 233 (256)
Q Consensus 154 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 233 (256)
+.+++.|++.+...+...+++.+..|+ ++||+.+++++....+|..+||.++|.+.+..||++.|++.+++.++..+..
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSN-QIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCc-ccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999997 9999999999999999999999999999999999999999999888877766
Q ss_pred hheee
Q psy11010 234 NYTIV 238 (256)
Q Consensus 234 ~~~~~ 238 (256)
++..+
T Consensus 395 ~~~~~ 399 (408)
T PRK09874 395 WNSLR 399 (408)
T ss_pred HHHHH
Confidence 65443
No 99
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.74 E-value=3.1e-16 Score=129.62 Aligned_cols=164 Identities=23% Similarity=0.277 Sum_probs=146.3
Q ss_pred HHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchh-HHHHHHHHHHHHHHHHHhhch
Q psy11010 70 VLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL-PMFTGFVIMFLSTLIFAFGRT 148 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~-~l~~~~~~~~~~~~~~~~~~~ 148 (256)
+.............+.+..+.+|.++.+.+++.+...++..++.++.+++.||+|||+ .+..+.++..++.+.....++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344444455556777766666889999999999999999999999999999999999 999999999999999988888
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
.+.+.+..++.|++.+...+...+++.|..|+ ++|++.+++.+....+|..++|.+.+.+.+..+|+..+.+.+++.++
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPP-EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 88889999999999999999999999999998 99999999999999999999999999999989999999999999888
Q ss_pred HHhHhh
Q psy11010 229 DGCKCN 234 (256)
Q Consensus 229 ~~~~~~ 234 (256)
..+..+
T Consensus 344 ~~i~~~ 349 (352)
T cd06174 344 AALLLL 349 (352)
T ss_pred HHHHhe
Confidence 666543
No 100
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.74 E-value=2.2e-16 Score=132.52 Aligned_cols=172 Identities=16% Similarity=0.093 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchh--HHHH------H
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL--PMFT------G 132 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~--~l~~------~ 132 (256)
.+...++..+.............+.++.+++|.++.+.+++.+...++..++.++.|+++||+|||+ .... +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 3444445555555555566667788888888999999999999999999999999999999999986 1111 1
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 133 FVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
.++..+........++.+.......+.+.+.+ ..+...+++.|.+|+ ++|++++|+.+....+|..++|.+.+.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPG-NIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh-hHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 11111111112222333333333444444444 788889999999998 9999999999999999999999999999999
Q ss_pred cC-chHHHHHHHHHHHHHHhHhh
Q psy11010 213 VG-KTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 213 ~g-~~~~~~~~~~~~~~~~~~~~ 234 (256)
.| |+..|++.+++.+++.+..+
T Consensus 374 ~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 374 TGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred CCchhHHHHHHHHHHHHHHHHHH
Confidence 88 99999988888777665544
No 101
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.74 E-value=1.8e-16 Score=134.40 Aligned_cols=157 Identities=15% Similarity=0.087 Sum_probs=129.0
Q ss_pred hchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q psy11010 78 TVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS 157 (256)
Q Consensus 78 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
......|.++ ++.|.++.+.+.+.+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+..+
T Consensus 238 ~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 238 FLLNWLPSLL-VGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHH-HhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3334566665 457999999999999999999999999999999999999998877777777777777777777777788
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHHHHHHhHhhhe
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
+.|++.+...+...+++.|.+|+ ++|++++|+.+....+|..+||.++|.+.++.+ |...++......+++.+..++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPT-QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcch-hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88988888888889999999998 999999999999999999999999999998754 5666666655555544444433
No 102
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.73 E-value=1.8e-16 Score=135.06 Aligned_cols=175 Identities=15% Similarity=0.119 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
++.+.+..++.........++++.++.+++|.++.+.|++.+++.++..+++++.|+++||+|||++++.+..+.+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33344455555555566788999998888999999999999999999999999999999999999999887665554433
Q ss_pred HHH---hhch-----HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 142 IFA---FGRT-----YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 142 ~~~---~~~~-----~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
... .+.. ....+++.++.|.+.....+....+..+ . . +++++.+|.......+|..++|++++.+.+ .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~ 167 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-S-RRSGFEYGRARMWGSLGWALCAFIAGILFN-I 167 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-H-hhccccchhhHHhhhHHHHHHHHHHHHHHh-c
Confidence 221 1111 1111222333333333333333333322 2 2 566778888888999999999999999887 4
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
+|++.|++.+++.++..++.++..+++
T Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 168 NPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred CchHhHHHHHHHHHHHHHHHhcccccc
Confidence 899999998888777666655544443
No 103
>PRK03545 putative arabinose transporter; Provisional
Probab=99.73 E-value=5.7e-16 Score=130.68 Aligned_cols=156 Identities=13% Similarity=0.061 Sum_probs=127.1
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
...++++.++.|.+..+.+++.+...++..+++++.|+++||+++|+.+....+.......+....++.+.+.++.++.|
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 44566667778999999999999999999999999999999999887544433333333334445667777788888999
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheee
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
++.+...+...+.+.+..| ++|++++|+++....+|..+||.++|++.++.|++..|++.+++.+++.+......+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP--DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9888777777888888865 588999999999999999999999999999999999999999888887777666554
No 104
>KOG2504|consensus
Probab=99.73 E-value=1.4e-16 Score=137.34 Aligned_cols=181 Identities=20% Similarity=0.271 Sum_probs=152.8
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 134 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~ 134 (256)
..+-|.+....++..+...-....+. ++-..+.++++.+.++++|+.++......+..|+.+.+.||+|.|++.+.|.+
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~G-v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFG-LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheeh-hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 34455555555555544333333333 44444578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchHHHHHHH-HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 135 IMFLSTLIFAFGRTYGVLFLA-RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+..++.++.+++++++.+++. -++.|+|.|..+......+..+|. ++|+.+.|+...+.++|.++-|.+...+.+..
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~--kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE--KKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH--HHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 999999999999999888775 577999999999999999999994 89999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHhHhhheee
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
|||+.+++.+.+.+-.++......|
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998776666666555
No 105
>PRK12382 putative transporter; Provisional
Probab=99.73 E-value=6.5e-16 Score=130.38 Aligned_cols=155 Identities=16% Similarity=0.106 Sum_probs=131.6
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (256)
.....+.++. +.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++
T Consensus 235 ~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 235 IGTFVSLYFA-SKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHH-hcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3344555553 345543 5666777888889999999999999999999999999888888888888888888888999
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
.|++.+...+...+.+.|.+|+ ++|+++.|+++....+|..++|.+.+++.++.||+..|.+.+++.++..++.++..
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPS-QVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999998888888899999998 99999999999999999999999999999999999999999988888776665543
No 106
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.73 E-value=1.7e-15 Score=127.98 Aligned_cols=169 Identities=11% Similarity=0.026 Sum_probs=130.5
Q ss_pred HHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh-hchH
Q psy11010 71 LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-GRTY 149 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~ 149 (256)
+............|.++.+ +|.+..+.+...+.+.++..+++++.|++.||+|||+.+..+..+.+++.++... ..+.
T Consensus 216 ~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 294 (393)
T PRK09705 216 LINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQL 294 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchH
Confidence 3344444455667777654 7999999999999999999999999999999999999999888777777665543 2222
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHHHH
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALG 228 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~ 228 (256)
..+ ..++.|++.+...+.......+.+++++++++..|+.+....++..++|.+.|++.+..| |...|.+.++..++
T Consensus 295 ~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 295 PVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 222 234678888888887777777877532789999999999999999999999999999876 88888887777777
Q ss_pred HHhHhhheeecCCC
Q psy11010 229 DGCKCNYTIVQKSS 242 (256)
Q Consensus 229 ~~~~~~~~~~~~~~ 242 (256)
..+....+.||++.
T Consensus 373 ~~~~~~~~~~~~~~ 386 (393)
T PRK09705 373 LMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHhcccccc
Confidence 66666665555443
No 107
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.72 E-value=3.2e-16 Score=130.60 Aligned_cols=157 Identities=17% Similarity=0.042 Sum_probs=126.4
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-----CchhHH-HHHHHHHHHHHHHHHhh---chH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLPM-FTGFVIMFLSTLIFAFG---RTY 149 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~l-~~~~~~~~~~~~~~~~~---~~~ 149 (256)
..+..|.+ .+++|++.+++|+.... .+...+ .+++|++.||+ ||||.+ +.+.++.++.....++. .+.
T Consensus 7 ~~~~~~~~-~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 7 VGNTLPYW-LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred HHhHHHHH-HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 34455555 57789999999999755 455554 99999999998 888874 56777777776666666 455
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC--------chHHHHH
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--------KTAPFLI 221 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g--------~~~~~~~ 221 (256)
+.+....++.+++.+...+...+++.|++|+ ++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILSD-EELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-hhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 5666677788888888889999999999998 999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHhHhhheeec
Q psy11010 222 LSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~ 239 (256)
.+++.++..+..++..+|
T Consensus 163 ~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 988877765555544444
No 108
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.72 E-value=4e-16 Score=131.28 Aligned_cols=154 Identities=13% Similarity=0.051 Sum_probs=122.7
Q ss_pred HHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCch----hHHHHHHHHHHHHHHHHHhhc
Q psy11010 72 DNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS----LPMFTGFVIMFLSTLIFAFGR 147 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r----~~l~~~~~~~~~~~~~~~~~~ 147 (256)
.........|++|.++ +++|.+..++|++.+++.++..++++++|++.||+||| +.+.....+. .......++
T Consensus 16 ~~~~~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (382)
T PRK11128 16 YFFAYGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH 92 (382)
T ss_pred HHHHHHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc
Confidence 3345566778888886 66899999999999999999999999999999999984 3332222221 222334467
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHH
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALAL 227 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~ 227 (256)
+++.+++.|++.|++.+...+...+++.++ . ++|+++.+......++|..+||++++++.+++|||..|++.++..+
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~-~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--Q-KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--H-hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 899999999999999998888888887776 3 6788888888888999999999999999999999999988776555
Q ss_pred HHHh
Q psy11010 228 GDGC 231 (256)
Q Consensus 228 ~~~~ 231 (256)
+..+
T Consensus 170 ~~~~ 173 (382)
T PRK11128 170 SMLL 173 (382)
T ss_pred HHHH
Confidence 5433
No 109
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.72 E-value=1.9e-15 Score=127.11 Aligned_cols=150 Identities=14% Similarity=0.126 Sum_probs=123.8
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
.+.|.+.+ +.|.++.+.+++.+...++..+++++.|++.||+|+|+++..+..+..++.+... . ........++.|
T Consensus 221 ~~lp~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 221 GLMPLYLN-HQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 45566654 5688988999999999999999999999999999999999888877777665443 2 233445677788
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
++.+...|...+++.|..|+ ++++...+.++...++|..+||.++|++.|+.||++.|.+.+.+.++..+..++
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEH-HELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 87778889999999999987 788888888888999999999999999999999999999988888776555444
No 110
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.72 E-value=1.1e-15 Score=136.69 Aligned_cols=139 Identities=19% Similarity=0.165 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
.+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++...+++.+++.|++.+...+...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677889999999999999999999999999999999998888888778888888889888888899999999999
Q ss_pred cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 179 ~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
|+ ++|++++|+.+....+|.++||.+++.+.+. +...+|++.+++.++++++.++ +|++
T Consensus 678 Pt-~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET 736 (742)
T TIGR01299 678 PS-DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDT 736 (742)
T ss_pred CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 98 9999999999999999999999999988774 4566777777777776655554 3543
No 111
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.71 E-value=8.4e-16 Score=132.15 Aligned_cols=181 Identities=14% Similarity=0.055 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc--CchhHH-HHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV--GYSLPM-FTGFVIMFL 138 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~l-~~~~~~~~~ 138 (256)
++..++..++............|.+++++.|.+..+.+++..++.++..++.++.|+++||+ +||+.. +....+..+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~ 334 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 44444444444444444556788888888899988999999999999999999999999999 555432 222233333
Q ss_pred HHHHHHh--hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHh-hhhhHHhhhhhccCc
Q psy11010 139 STLIFAF--GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL-IGPPFGGIMYQFVGK 215 (256)
Q Consensus 139 ~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~-~g~~i~~~l~~~~g~ 215 (256)
+.+.... ..+.....++.++.|.+..........++.|.+|+ ++||+++|+.+....+|+. ++|.+.|.+.++.||
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~ 413 (452)
T PRK11273 335 ATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK-KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 413 (452)
T ss_pred HHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh-hhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc
Confidence 3332222 23444444444555554333333334567899998 9999999999988888765 489999999999999
Q ss_pred hHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
+..|++.++.++++.+........++++
T Consensus 414 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 414 DGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999988888888776666555444443
No 112
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.70 E-value=3.2e-16 Score=131.69 Aligned_cols=165 Identities=15% Similarity=0.111 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH-
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST- 140 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~- 140 (256)
+.......+.............|.+.++++|.++.+.+.+.....++..++.++.|+++||+|||+.+..+..+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 3334444444445555555677888778889999999999999999999999999999999999998775554443332
Q ss_pred -HHHHh--hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHH-HHHHHHHHHhhhhhHHhhhhhccC-c
Q psy11010 141 -LIFAF--GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVG-K 215 (256)
Q Consensus 141 -~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~-~~~~~~lg~~~g~~i~~~l~~~~g-~ 215 (256)
+...+ .++.+.++...++.|++.+...+...+++.|.+|+ ++|+++.++ ++....+|..++|.++|++.++.| |
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~ 379 (394)
T TIGR00883 301 PLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPT-EVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDW 379 (394)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCc-cceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcc
Confidence 22222 24566667778889999988999999999999998 999999998 456677899999999999999988 8
Q ss_pred hHHHHHHHHHHH
Q psy11010 216 TAPFLILSALAL 227 (256)
Q Consensus 216 ~~~~~~~~~~~~ 227 (256)
+..++...+..+
T Consensus 380 ~~~~~~~~~~~l 391 (394)
T TIGR00883 380 YAIGYYLAALAL 391 (394)
T ss_pred hhHHHHHHHHHH
Confidence 877766665544
No 113
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.70 E-value=4.8e-16 Score=129.72 Aligned_cols=180 Identities=17% Similarity=0.190 Sum_probs=160.0
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhc----CcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-CchhHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLM----GETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTG 132 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~~ 132 (256)
+.+.+..++...+-+.+.++.+..++..|+..+++ .+++++.-+++.+..-.-...+++||++||+ |+|+.++.|
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lG 98 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLG 98 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 45567778888888999998888888888888888 9999999999999888888999999999996 999999999
Q ss_pred HHHHHHHHHHHHhhc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc-chhhHHHHHHHHHHHHHHhhhhhHHhhh
Q psy11010 133 FVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 133 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~lg~~~g~~i~~~l 209 (256)
.+++.+|.++++... +...++++..+.++|.|..-+...+++.|.+|++ .+|-.++++++.+.++|++++|.+.+++
T Consensus 99 ail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~ 178 (498)
T COG3104 99 AILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLL 178 (498)
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHH
Confidence 999999999998874 7888999999999999999999999999999873 3567788999999999999999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 210 YQFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 210 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
.+.+||+..|...++-..++.+..++..
T Consensus 179 ~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 179 AINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999998888776665544
No 114
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.69 E-value=1.1e-15 Score=129.13 Aligned_cols=147 Identities=16% Similarity=0.154 Sum_probs=120.1
Q ss_pred hHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH-HHHhhchHHHH
Q psy11010 74 MLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL-IFAFGRTYGVL 152 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~-~~~~~~~~~~~ 152 (256)
..........|.++.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+.++..+..+ +....++.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (405)
T TIGR00891 252 LYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVL 331 (405)
T ss_pred HHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHH
Confidence 33334445677788888999999999999999999999999999999999999998888766533332 33344556666
Q ss_pred HHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHH
Q psy11010 153 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLI 221 (256)
Q Consensus 153 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~ 221 (256)
.+..++.|++.+...+...+++.|.+|+ ++|++++|+.+....+|..++|++.|++.++.| |+..+..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 332 GLGLFFQQMLVQGIWGILPKHLGEYFPT-DQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHccchhhHHHHHhhhCCc-chhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 6666777777777778888999999998 999999999999999999999999999999988 8776654
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.68 E-value=5.6e-15 Score=126.67 Aligned_cols=178 Identities=17% Similarity=0.138 Sum_probs=153.8
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCch--hHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFV 134 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~l~~~~~ 134 (256)
++.+.+...+++.++..-+.+.+..+...|..+++|++..+...+..+..+..++++.++|++.||+|.| ++++.+.+
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 3445666677777777777777778888888889999999999999999999999999999999999999 88888877
Q ss_pred HHHHHHHHHHh--------hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 135 IMFLSTLIFAF--------GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 135 ~~~~~~~~~~~--------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
++.+..+...+ .++.+.+++.-++.|+..|..++...++.+|+.|+ ++.+..+|++.......+++||++.
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~-g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP-GREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77555554444 56778899999999999999999999999999998 8999999999999999999999999
Q ss_pred hhhhhccC-chHHHHHHHHHHHHHHhHhhh
Q psy11010 207 GIMYQFVG-KTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 207 ~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 235 (256)
|.+.+..| .|+.+....++.+++.++.++
T Consensus 437 g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 437 GLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99999887 899999888888887666644
No 116
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.68 E-value=3.4e-15 Score=127.76 Aligned_cols=176 Identities=11% Similarity=-0.050 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc--Cch-hHHHHHH---HH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV--GYS-LPMFTGF---VI 135 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r-~~l~~~~---~~ 135 (256)
++.+.+..+.............|.++.+++|.+..+.+...+.+.++..++.++.|+++||+ ++| ....... .+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~ 324 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHH
Confidence 33333434444444444556678888788899999999999999999999999999999999 333 3222211 11
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
..+...... ..+.....+..+..|++...........+.|.+|+ ++|++++|+.+....+|..++|.+.|++.++.||
T Consensus 325 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 325 SVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK-EAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred HHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH-hhHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 221212222 22333333333444443322233334567899998 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhHhhheeec
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+..|++.+++.++..+..+...++
T Consensus 403 ~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 403 TGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999988888876666554443
No 117
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.68 E-value=4.7e-15 Score=128.45 Aligned_cols=177 Identities=20% Similarity=0.173 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
+.+..++++..+.+++..+.....+.++. +..-|+...+++..+..+...+.++++|.++||++||++++.+.++.++.
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALV 88 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Confidence 34444555555656666555555555543 45668999999999999999999999999999999999999998877665
Q ss_pred HHHHHh-----hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 140 TLIFAF-----GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 140 ~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
.+..++ ..+.+.+++..++.|++.+...|+.++++.|.+|+ ++...++++.+...++...+||.++|.+....|
T Consensus 89 ~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~-~~L~~A~al~s~~~niar~iGPalgG~Lva~~G 167 (524)
T PF05977_consen 89 ALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK-EDLPAANALNSISFNIARIIGPALGGILVAFFG 167 (524)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-hhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 544433 23678888999999999999999999999999998 999999999999999999999999999999889
Q ss_pred chHHHHHHHHHHHHHHhHhhheee
Q psy11010 215 KTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
-.++|.+.++..++..+.+....+
T Consensus 168 ~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 168 AAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999888776665544444433
No 118
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.68 E-value=7.3e-15 Score=125.44 Aligned_cols=180 Identities=17% Similarity=0.140 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh----hcCchhHHHHH-HHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLPMFTG-FVI 135 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~l~~~-~~~ 135 (256)
.+..++...+..++.+....+..++|+ +++|.++...+++..+..+...+.+|+.|+++| |+|||+.++.+ .+.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 344555555556777777778888875 779999999999999999999999999999999 59999998774 666
Q ss_pred HHHHHHHHHhhchHH-----------------HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchh--hHHHHHHHHHHH
Q psy11010 136 MFLSTLIFAFGRTYG-----------------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER--GNAMGIALGGLA 196 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~-----------------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r--~~~~g~~~~~~~ 196 (256)
.+++.++++++++.. .++++..+..++.+...++..++++|.+|+ ++| +.+.++.+.+.+
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~-~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGG-DARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-hhHHHHHHHHHHHHHHH
Confidence 666667777765532 223333445567788888889999999998 654 689999999999
Q ss_pred HHHhhhhhHHhhh--hhc-------------cCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 197 LGVLIGPPFGGIM--YQF-------------VGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 197 lg~~~g~~i~~~l--~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
+|.++|+.+++.. .+. .+.+..|++.+++.++..++..+..+|.+.
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 9999999999865 221 157889999999888888888887777653
No 119
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=9.3e-15 Score=118.94 Aligned_cols=167 Identities=14% Similarity=0.156 Sum_probs=141.5
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH---h
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---F 145 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~---~ 145 (256)
.++.++..... ..+.+.+++.++++..+++++...+..++.+.+++.|++.+|+|+|+-++.|+.++++++.++. .
T Consensus 22 Ffl~G~~~~l~-diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 22 FFLWGFITCLN-DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HHHHHHHhhcc-hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33434444333 3444445899999999999999999999999999999999999999999999999999999885 4
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-------------
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------------- 212 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~------------- 212 (256)
..++..++++.++.|.|.+...+..+++++...++ +...+-+++.+..+++|++++|++++.+..+
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~-~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKP-ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc-hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 56788899999999999999999999999999998 8888899999999999999999999987762
Q ss_pred ------cCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 213 ------VGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 213 ------~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
..|+++|...+...++..+......
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 2488888888887777666655544
No 120
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.67 E-value=2.8e-15 Score=130.36 Aligned_cols=148 Identities=16% Similarity=0.057 Sum_probs=116.6
Q ss_pred hhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh--chHHHHHHHHH
Q psy11010 80 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--RTYGVLFLARS 157 (256)
Q Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 157 (256)
...+|.++++++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 3567888777899999999999999999999999999999999999999888877666665444332 33333444444
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
+.+.......+...+++.|.+|+ ++|++++|+.+....+|..+||.++|.+.++.||+..+...+....+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDT-EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCH-HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 44443334456667889999998 99999999999999999999999999999999999887665544333
No 121
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.67 E-value=5.8e-15 Score=127.91 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=142.8
Q ss_pred hHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy11010 74 MLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLF 153 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
.....+..++|.+..+.+|.++..+|++.+.+++|.+++..+.+++.+|+++++.+..+.++.+++.+..+++++.+..+
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~ 311 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLAL 311 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHH
Confidence 33334445677777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHh
Q psy11010 154 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKC 233 (256)
Q Consensus 154 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 233 (256)
+..++.|++.........+.+.+..|+ +.|||.++++++....+..+|.++.|.+.+..|.+.++.+.++..+++.++.
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~-~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPD-WVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 9999999999999999999999999999999999999888777666655554
Q ss_pred hh
Q psy11010 234 NY 235 (256)
Q Consensus 234 ~~ 235 (256)
..
T Consensus 391 ~~ 392 (524)
T PF05977_consen 391 LR 392 (524)
T ss_pred HH
Confidence 43
No 122
>PRK09952 shikimate transporter; Provisional
Probab=99.67 E-value=8e-15 Score=125.57 Aligned_cols=162 Identities=16% Similarity=0.097 Sum_probs=120.8
Q ss_pred HhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh---h-ch
Q psy11010 73 NMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---G-RT 148 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~---~-~~ 148 (256)
....+......+.++++++|.+......+.....+...++.++.|+++||+|||+++..+.++.+++.+.+.. . ++
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI 342 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 3344444556777877888888876666666777778888999999999999999998887766555433322 2 23
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHH-HHHHHHHHhhhhhHHhhhhhcc--CchHHHHHHHHH
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIA-LGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSAL 225 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~-~~~~~lg~~~g~~i~~~l~~~~--g~~~~~~~~~~~ 225 (256)
...+++..++.+++.+...+...++++|.+|+ +.|+++.++. +.+..+|+.++|.+.+++.+.. +|...+...++.
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~-~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 421 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA-SYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAG 421 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc-chhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 44444556677888888888889999999998 9999999995 4455689999999999998854 488888877777
Q ss_pred HHHHHhHhhh
Q psy11010 226 ALGDGCKCNY 235 (256)
Q Consensus 226 ~~~~~~~~~~ 235 (256)
.+++.+..+.
T Consensus 422 ~~i~~v~~~~ 431 (438)
T PRK09952 422 CLISAMTALL 431 (438)
T ss_pred HHHHHHHHHH
Confidence 7776655543
No 123
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.67 E-value=7.3e-15 Score=126.45 Aligned_cols=158 Identities=11% Similarity=0.019 Sum_probs=122.6
Q ss_pred hhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh-----hc------hHH
Q psy11010 82 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-----GR------TYG 150 (256)
Q Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-----~~------~~~ 150 (256)
..+.+ .++.|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.++..+ .+ +..
T Consensus 306 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (481)
T TIGR00879 306 YSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNV 384 (481)
T ss_pred HHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Confidence 34444 5678988888899999999999999999999999999999999988888877766652 11 222
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHH
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 230 (256)
.+....++.+.......+....++.|.+|+ ++|++++++.+....+|.+++|.+.+.+.++.+|++.|++.++++++..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 385 AIVFILLFIAFFAMGWGPVPWVIVSEIFPL-SLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHHHccccCeehhhhhccCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHH
Confidence 222222222222223345566778999998 9999999999999999999999999999999999999999998888877
Q ss_pred hHhhheeecCC
Q psy11010 231 CKCNYTIVQKS 241 (256)
Q Consensus 231 ~~~~~~~~~~~ 241 (256)
+..++..++.+
T Consensus 464 i~~~~~~~~~~ 474 (481)
T TIGR00879 464 IFVYFFLPETK 474 (481)
T ss_pred HHHheecccCC
Confidence 77766665543
No 124
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.66 E-value=1.8e-14 Score=121.32 Aligned_cols=153 Identities=12% Similarity=0.095 Sum_probs=127.1
Q ss_pred hhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q psy11010 76 LTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLA 155 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
........+.+. ++.|.+..+.|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++.++.++.+.+++.
T Consensus 221 ~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T PRK11128 221 HAAYYGFSAIYW-QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVI 299 (382)
T ss_pred hHhHHHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 333344556665 5689999999999999999999999999999999999999999999999988888888899988899
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHH-HHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~-~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
.++.|++.+...+....++.+. ++ +++++..+.++ ....+|..+||.++|.+.|..|+ ..|+..+++.+++.++
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAAR-PG-SEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999888888888887 44 67788999875 56678889999999999999887 4677666666654433
No 125
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.6e-15 Score=124.10 Aligned_cols=181 Identities=16% Similarity=0.043 Sum_probs=148.5
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc--CchhHHHH-HHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV--GYSLPMFT-GFV 134 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~l~~-~~~ 134 (256)
+.+.++.++++.++.....+.+....|.|+.|..|.+...+++..+.+-++...+.+++|+++||+ |||....+ ..+
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 455678888888888888988999999999999999999999999999999999999999999996 67766544 344
Q ss_pred HHHHHHHHHHhhc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHH-HHhhhhhHHhhhhh
Q psy11010 135 IMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLAL-GVLIGPPFGGIMYQ 211 (256)
Q Consensus 135 ~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~l-g~~~g~~i~~~l~~ 211 (256)
...++.+..-+++ |+....++.++.|+..-+-.-.......|..|+ +.-|++.|+.+.+..+ |...+....+++.|
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK-~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK-KAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH-hhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 4444444555554 457777788888887777766667788899998 9999999999999999 99999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 212 FVGKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
.+||...|.+..+.++++.++.......
T Consensus 409 ~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 409 TWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998888877766665554443
No 126
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.66 E-value=1.4e-14 Score=122.69 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=124.7
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHH-HHHHHHHHHHHHHH-
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMF-TGFVIMFLSTLIFA- 144 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~-~~~~~~~~~~~~~~- 144 (256)
+..+.............|.++ +++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..++..+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 229 MVRIINTIGLFGFAVFLPMFV-AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 333333444444455667776 568999999999999999999999999999999999888764 33333333322222
Q ss_pred ----hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 145 ----FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 145 ----~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
..++.+..++..++.|++.+...+ ....+.|.. + ++|++++|+.+....+|..++|.+++.+.+..||...++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~ 384 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-P-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVW 384 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-c-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 124566667778888888877654 355666754 4 689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhhhe
Q psy11010 221 ILSALALGDGCKCNYT 236 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~~ 236 (256)
+.+++.++..++..+.
T Consensus 385 ~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 385 IFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9998888877666553
No 127
>PRK10504 putative transporter; Provisional
Probab=99.66 E-value=1.3e-14 Score=125.50 Aligned_cols=146 Identities=16% Similarity=0.123 Sum_probs=118.4
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh--
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-- 146 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-- 146 (256)
.++............|.+.+..+|.++.+.+++.....++..++.++.|++.||+|+|+++..+.++.+++.++..+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence 333333444444456667666789999999999999999999999999999999999999999888888776665543
Q ss_pred -chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 147 -RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 147 -~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
++.+.+.+..++.|++.+...+....++.+.+|+ ++++.++++.++...+|..+|+.++|.+.+..|+
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD-NLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-HhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3334445567788899998888889999999998 9999999999999999999999999998877655
No 128
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.66 E-value=3.7e-15 Score=127.45 Aligned_cols=171 Identities=15% Similarity=0.125 Sum_probs=133.5
Q ss_pred HHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh----cCch-hHHHHHHHHHHHHHHHHHh
Q psy11010 71 LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r-~~l~~~~~~~~~~~~~~~~ 145 (256)
..+.......+.+++++.+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++.+.+..+++.+++..
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 3444455555667777888999999999999999999999999999999998 6774 4667787888877777765
Q ss_pred hch------HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh-------c
Q psy11010 146 GRT------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------F 212 (256)
Q Consensus 146 ~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~-------~ 212 (256)
.++ ...+++.+++.+++.+....+..++..|..+++++|++..++.+.+..+|..+++.+.+.+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~ 169 (437)
T TIGR00792 90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDK 169 (437)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 542 455666778889888888888889999987433899999999988888888777766655542 4
Q ss_pred cCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 213 VGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.+|++.+.+.+++.++..++.++..+|++
T Consensus 170 ~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 170 FGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 57999999999888887766666666544
No 129
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.65 E-value=2.6e-14 Score=117.77 Aligned_cols=172 Identities=18% Similarity=0.138 Sum_probs=138.9
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 143 (256)
...+..++...+.+...++..+++++..|.+.+.++++.-++.++..++..+.|++.|| +.|+.+.....+.++..+.+
T Consensus 215 ~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l 293 (394)
T COG2814 215 LGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLAL 293 (394)
T ss_pred HHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHH
Confidence 33333333334444444566667888899999999999999999999999999999999 99999888877777777766
Q ss_pred Hh-hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHH
Q psy11010 144 AF-GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL 222 (256)
Q Consensus 144 ~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~ 222 (256)
.+ .++.+..++..++.|+..+......+..+++.. + +.++.+.+++....++|..+|..++|.+.+++|+....++.
T Consensus 294 ~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p-~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~ 371 (394)
T COG2814 294 TFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-P-DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVG 371 (394)
T ss_pred HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Confidence 55 455556666777788888777777777777844 4 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhhheee
Q psy11010 223 SALALGDGCKCNYTIV 238 (256)
Q Consensus 223 ~~~~~~~~~~~~~~~~ 238 (256)
+++.+++.++.++..+
T Consensus 372 a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 372 AALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999888777665443
No 130
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.64 E-value=3.7e-18 Score=146.63 Aligned_cols=145 Identities=18% Similarity=0.238 Sum_probs=127.6
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHhhhhchhhhhhh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR---TYGVLFLARSLQGIGSSCSSVSGMG 172 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~ 172 (256)
.+.++..+...++..++++++|+++||+|||+.++.+.++..++.++.++++ +++.+.++|++.|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc---CchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 173 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---GKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 173 ~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
++.|..|+ ++|++...+.+....+|..++..++..+.+.. +||..+++..+++++..+.. +..||.|+
T Consensus 126 ~~~E~~~~-~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~ 196 (451)
T PF00083_consen 126 YISEIAPP-KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPR 196 (451)
T ss_pred cccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 99999998 99999999999999999998888876554433 49999998888887754443 55666553
No 131
>PRK15075 citrate-proton symporter; Provisional
Probab=99.63 E-value=2.8e-14 Score=122.10 Aligned_cols=144 Identities=11% Similarity=0.074 Sum_probs=107.5
Q ss_pred HHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH-HH---Hhhc
Q psy11010 72 DNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL-IF---AFGR 147 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~-~~---~~~~ 147 (256)
.......+....|.++++.+|.+..+.++....+.++..++.++.|+++||+|||++++.+.++.++..+ .. ...+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444445556678888777899998999999999999999999999999999999998876554433221 11 1223
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHH-HHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIA-LGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~-~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
+...+.+..++.|++.+...+....++.|.+|+ +.|+++.++. +.+..+++.++|.+.+++.++.|+.
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPA-EVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCC-CccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 444444445666777777777777889999998 9999999995 4445556788999999999988864
No 132
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.63 E-value=1.5e-14 Score=122.32 Aligned_cols=152 Identities=14% Similarity=0.149 Sum_probs=127.2
Q ss_pred hHHHHHhhh---cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q psy11010 83 ARENRHKYL---MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 159 (256)
Q Consensus 83 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (256)
.+.++.+.+ +.+....|.+.++..+...++.+..|++.||+|+|+.+..+.++.++...+...+++.+.+++.+++.
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 317 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLH 317 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 444544433 44556789999999999999999999999999999999999998888888877888888888889999
Q ss_pred HhhhhchhhhhhhhhhhcccCcchhhHHHHH-HHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 160 GIGSSCSSVSGMGMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 160 G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~-~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
|++..........+..+..++ +.+++..+. ++....+|.++++.++|++.+..||+.+|.+.+++.++..++..+
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~-~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 318 AFEVPFLLVGCFKYITSQFDV-RLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHHHHHhCCc-ceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 998877666667778888887 888887766 678899999999999999999999999999999888877665543
No 133
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.63 E-value=5.6e-15 Score=127.11 Aligned_cols=167 Identities=15% Similarity=0.156 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc--CchhHHHH--HHHHHHH
Q psy11010 63 VIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV--GYSLPMFT--GFVIMFL 138 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~l~~--~~~~~~~ 138 (256)
....+..++...........++.+. ++.|.+..+.+++.++..++..+++++.|+++||. ++|+.... +.++.++
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l 322 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYA-KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGL 322 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHH
Confidence 3333344444444444445567775 55799999999999999999999999999999984 33433333 3344445
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc-CchH
Q psy11010 139 STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTA 217 (256)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~-g~~~ 217 (256)
+.++..+.++++.+++.+++.|++.+...+...+++.|.+|+ +++++++|+++....+|.++||.++|.+.+.. +|++
T Consensus 323 ~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 401 (455)
T TIGR00892 323 THLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA-QRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKY 401 (455)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH-HHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcch
Confidence 555666778888888899999999999999999999999998 99999999999999999999999999999877 4999
Q ss_pred HHHHHHHHHHHHHh
Q psy11010 218 PFLILSALALGDGC 231 (256)
Q Consensus 218 ~~~~~~~~~~~~~~ 231 (256)
.|++.+++.+++.+
T Consensus 402 ~f~~~~~~~li~~~ 415 (455)
T TIGR00892 402 IFYASGSIVVSAGL 415 (455)
T ss_pred HHHHhhHHHHHHHH
Confidence 99988877766554
No 134
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.62 E-value=1.4e-14 Score=120.57 Aligned_cols=133 Identities=17% Similarity=0.224 Sum_probs=118.8
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT-YGVLFLARSLQ 159 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 159 (256)
...|.+.++.+|.++.+.+++.+...++..++.++.+++.||++||+.+..+..+.+++.++..+.++ .+.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 45566666668999999999999999999999999999999999999999888888888777777664 77788889999
Q ss_pred HhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 160 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 160 G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
|++.+...+...+++.|.+|+ ++|+++.|+.+....+|..++|.++|++.++.|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPA-ELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998 999999999999999999999999999988654
No 135
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.62 E-value=1.5e-14 Score=123.98 Aligned_cols=164 Identities=13% Similarity=0.037 Sum_probs=114.8
Q ss_pred hhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH---HHHHHHHh--hchHHH
Q psy11010 77 TTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF---LSTLIFAF--GRTYGV 151 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~---~~~~~~~~--~~~~~~ 151 (256)
.......|.++++..|.++.+.++......++..++.++.|+++||+++++....+..+.. ++.+.... ..+.+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 3444567888877789999999999999999999999999999999975432223322221 12222222 223333
Q ss_pred HHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHH-HhhhhhHHhhhhhccCchHHHHHHHHHHHHHH
Q psy11010 152 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG-VLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230 (256)
Q Consensus 152 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg-~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 230 (256)
..+..++.|++.............|.+|+ ++|++++|+.+....+| ..++|.+.|.+.++.||...|++.+++.+++.
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~ 426 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPK-KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 426 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcCh-hheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHH
Confidence 33334445544322222223567899998 99999999998887776 46899999999999999999998888887777
Q ss_pred hHhhheeecCC
Q psy11010 231 CKCNYTIVQKS 241 (256)
Q Consensus 231 ~~~~~~~~~~~ 241 (256)
+..++..++++
T Consensus 427 ~~~~~~~~~~~ 437 (438)
T TIGR00712 427 ILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHhhcc
Confidence 77777666654
No 136
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.61 E-value=1.9e-14 Score=117.74 Aligned_cols=179 Identities=18% Similarity=0.129 Sum_probs=143.0
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
.++.+.+..+++.+|-.... +...+|.|++++++.++.+.|.+...+.+...+..+.+|+++||+|.++++......
T Consensus 217 ~~~~W~lsllY~~tFG~Fvg---fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~ 293 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVG---FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVG 293 (417)
T ss_pred CcchHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHH
Confidence 34444555555555544444 445667788999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhh-------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 136 MFLSTLIFAFG-------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 136 ~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
++++..+..+. .+....++..+..++..|........++..++| ++-|...|+.....++|++.-|...+.
T Consensus 294 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~--~~~G~v~G~vga~G~lGGf~lp~~~g~ 371 (417)
T COG2223 294 MALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP--KETGAVTGIVGAIGGLGGFFLPLAFGV 371 (417)
T ss_pred HHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH--hhhhHHHHHHHHhccccccchhHHHHH
Confidence 88888877764 344445555555666666666666788889997 688999999999999999999999999
Q ss_pred hhhccC-chHHHHHHHHHHHHHHhHhhheeec
Q psy11010 209 MYQFVG-KTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 209 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
..+..| +...|++...+.+++.+..+..+.+
T Consensus 372 ~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 372 SLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999888 9999999999988888877665544
No 137
>KOG0252|consensus
Probab=99.61 E-value=1.7e-15 Score=124.78 Aligned_cols=185 Identities=14% Similarity=0.122 Sum_probs=142.2
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhc-------CcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchh
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLM-------GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL 127 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~ 127 (256)
+++....+.+..+..+.+.++...+..+.+.+-...+| .++...+.+..+..+|.+++++++|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 34555666777778888999998887775554322222 45667889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc-------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHh
Q psy11010 128 PMFTGFVIMFLSTLIFAFGR-------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL 200 (256)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~ 200 (256)
++...+++++++.+++++.. -..++...|++.|+|.|+-+|...+..+|.... +.||...+..-...++|..
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~-~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANK-KTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhh-ccccceeEEEEEecchhHh
Confidence 99999999999999777632 356788899999999999999999999999997 9999998887777777766
Q ss_pred hhhhHHhhhhhc-------------c--CchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 201 IGPPFGGIMYQF-------------V--GKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 201 ~g~~i~~~l~~~-------------~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
.|.+++-.+... . =||..+.+.++++++....-+ ..||++
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~ 249 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETA 249 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcch
Confidence 666665443321 1 289888888777777544433 344443
No 138
>TIGR00895 2A0115 benzoate transport.
Probab=99.61 E-value=4e-14 Score=119.19 Aligned_cols=138 Identities=17% Similarity=0.147 Sum_probs=109.6
Q ss_pred HHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchH
Q psy11010 70 VLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY 149 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~ 149 (256)
+.............| ++.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+....+......++....++.
T Consensus 260 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 260 FMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 333334444444555 4467789999999999999999999999999999999999955544444333333333335566
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhh
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l 209 (256)
+..++..++.|++.+...+...+++.|.+|+ ++|++++|+.+....+|..+||.++|++
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPT-AIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 7777888899999999999999999999998 9999999999999999999999999876
No 139
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=5.6e-14 Score=119.61 Aligned_cols=167 Identities=13% Similarity=0.011 Sum_probs=122.6
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-hhHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~~~~~~~~~~~~~ 143 (256)
+++..+..........|.++.++.+++|.+..++|++.+++.++..++++++|+++||+|+ |+++..+.++..+...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3445555666677777888888889999999999999999999999999999999999965 778888888888888888
Q ss_pred HhhchHHHHHHHHHHHHhhhhchhhhhhhhhh--------hcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 144 AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA--------ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 144 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~--------~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
.+.++++.+++.+++.|++.+...+...++.. |.... ..|.+..| .+|..++|.+++.+....+|
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~-~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTD-FPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhc-CCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 88889999999999999987777666555432 22221 23444444 36888888888877332234
Q ss_pred hHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 216 TAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
. +|++.+++.++..+. .+..||+
T Consensus 160 ~-~f~~~~~~~~~~~~~-~~~~~e~ 182 (418)
T TIGR00889 160 I-QLYITAGSSALLGVF-ALTLPDI 182 (418)
T ss_pred H-HHHHHHHHHHHHHHH-HhcCCCC
Confidence 4 456666666655544 3445554
No 140
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.60 E-value=4.6e-14 Score=120.37 Aligned_cols=139 Identities=17% Similarity=0.114 Sum_probs=104.5
Q ss_pred hhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q psy11010 80 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 159 (256)
Q Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (256)
...+|.++. +.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+..++.
T Consensus 251 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 251 FGLLPTYLA-GEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 345666654 4688888999999999999999999999999999999999888877766655444322211122222333
Q ss_pred Hh--hhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 160 GI--GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 160 G~--~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
|+ +.....+..+.++.|.+|+ ++|++++|+......+|..++|.+.+++.++.|+....+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPL-EVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcH-HHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 33 2223345566788999998 999999999999999999999999999999988665433
No 141
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.60 E-value=2e-13 Score=111.54 Aligned_cols=161 Identities=11% Similarity=-0.011 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHh--hhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHK--YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
.+....+..++.......+....+.|+.+ .+|.++.+.++..+.+..+..+++.+.+++.||+|+|+.+.++.++.++
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 33334444444444455556667778764 3689999999999999999999999999999999999998888887777
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHH
Q psy11010 139 STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP 218 (256)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~ 218 (256)
+.++....++... ..+.++.|++.+..+|...+...+.+|+ +.+++.++. ....+|+.++|++.|.+.|..|.+.+
T Consensus 221 ~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~--~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 221 LSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGR--HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh--hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHH
Confidence 7766655554333 3456689999999999999999999874 556677775 56678999999999999999999888
Q ss_pred HHHHHHH
Q psy11010 219 FLILSAL 225 (256)
Q Consensus 219 ~~~~~~~ 225 (256)
|++..+.
T Consensus 297 ~~v~~~~ 303 (310)
T TIGR01272 297 FALPVPC 303 (310)
T ss_pred HHHHHHH
Confidence 8754443
No 142
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.60 E-value=2.8e-14 Score=122.08 Aligned_cols=149 Identities=17% Similarity=0.217 Sum_probs=115.0
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
.++..++............+.+.+..++ ++...+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 305 (437)
T TIGR00792 227 LCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFF 305 (437)
T ss_pred HHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333334444444445 456778888888999999999999999999999999999888888877766
Q ss_pred hh-chHHHHHHHHHHHHhhhhchhhhhhhhhhhccc-------CcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 145 FG-RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYP-------DDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 145 ~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~-------~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
+. ++.+.+++..++.|++.+...+...++++|..+ + +++|.+.|+++....+|..+++.+.|++.+..||
T Consensus 306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 306 FAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGV-RAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 54 355666777888999999999998999998865 3 5679999999999999999999999999887766
No 143
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.60 E-value=1.1e-13 Score=116.85 Aligned_cols=152 Identities=15% Similarity=0.056 Sum_probs=116.0
Q ss_pred hhhhHHHHHhhhcCcchhHHHHHHHHHH-HHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh------hchHHHH
Q psy11010 80 EDVARENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF------GRTYGVL 152 (256)
Q Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~------~~~~~~~ 152 (256)
....+.++ +|.|.+++++|++.....+ ...++..+.|++.||+|+|+.+..+.++.++..+.... ..+...+
T Consensus 228 ~~~~~~~l-~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 228 FGLSKLYL-VDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHhhHHH-HhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 34556665 4579999999999988865 56677889999999999999998877665333322211 1233344
Q ss_pred HHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 153 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 153 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
+....+.+++.+...+...+.+.+..++++++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.+++.++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 45556667778888888888887877632788999999999999999999999999999999999999888777665443
No 144
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.60 E-value=8.6e-14 Score=120.48 Aligned_cols=158 Identities=14% Similarity=0.052 Sum_probs=118.8
Q ss_pred hHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc--h-HH-HHHHHHHH
Q psy11010 83 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--T-YG-VLFLARSL 158 (256)
Q Consensus 83 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~l 158 (256)
.|.+ .++.|.+....++......+...++.++.|+++||+|||++++.+.++.+++.+++.... + .. ....+.++
T Consensus 294 ~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 294 APEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 3443 466788877777787888889999999999999999999999999999888877665421 1 11 22334444
Q ss_pred HHhhhhc-hhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh------hhhccCchHHHHHHHHHHHHHHh
Q psy11010 159 QGIGSSC-SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI------MYQFVGKTAPFLILSALALGDGC 231 (256)
Q Consensus 159 ~G~~~g~-~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~------l~~~~g~~~~~~~~~~~~~~~~~ 231 (256)
.+++.+. ..+...++++|.+|+ ++|++++|+.+....+|.++++.+.+. +.+..+|++.|++.+++++++.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 373 YVAAFAMSWGPVCWVLLSEIFPN-AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred HHHHHhccccchhHHHhHhhCCh-hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHH
Confidence 5554443 336678999999998 999999999999999988888666554 34577899999998888887777
Q ss_pred HhhheeecCCC
Q psy11010 232 KCNYTIVQKSS 242 (256)
Q Consensus 232 ~~~~~~~~~~~ 242 (256)
+.+++.||.++
T Consensus 452 ~~~~~~~e~~~ 462 (479)
T PRK10077 452 FMWKFVPETKG 462 (479)
T ss_pred HHHhccccCCC
Confidence 76666665443
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.59 E-value=1.7e-13 Score=119.00 Aligned_cols=155 Identities=11% Similarity=0.029 Sum_probs=122.3
Q ss_pred hhhHHHHHhhhcCcchhHHHHHH-HHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHH---HHhh-chHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFG-SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI---FAFG-RTYGVLFLA 155 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~---~~~~-~~~~~~~~~ 155 (256)
...++++.+++|.+..+.+++.. ...++.+++.++.|+++||+|+|+.+..+.++.++..+. .+.. ++...+.+.
T Consensus 243 ~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 243 SLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 34556666778999999999985 566899999999999999999988877766555544332 2232 344445555
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
.++..++.|...+...++..+..++ +.+++..++.+....+|..+++.+.|++.+..||+..|.+.+++++++.+...+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~-~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNK-SFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666677778999999998 899999999999999999999999999999999999999988888887666655
Q ss_pred e
Q psy11010 236 T 236 (256)
Q Consensus 236 ~ 236 (256)
.
T Consensus 402 ~ 402 (491)
T PRK11010 402 C 402 (491)
T ss_pred H
Confidence 4
No 146
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.59 E-value=2.8e-14 Score=119.22 Aligned_cols=157 Identities=15% Similarity=0.062 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-hhHHH-HHH-HHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMF-TGF-VIMFL 138 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~-~~~-~~~~~ 138 (256)
+..+.+..+.............+.++.+++|.++.+.+++.+...++..++.++.|++.||..+ |+... ... ....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIV 297 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 3334444444444444555667778878889999999999999999999999999999998643 33222 211 22222
Q ss_pred HHHHHHh--hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 139 STLIFAF--GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 139 ~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
+...... ..+.....+..++.|+......+....++.|.+|+ ++|+++.|+.+....+|..++|.+.|.+.++.||+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 298 SLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPK-KAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc-chhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 2222222 23445555666677776666666667889999998 99999999999999999999999999999999998
Q ss_pred HHH
Q psy11010 217 APF 219 (256)
Q Consensus 217 ~~~ 219 (256)
+.|
T Consensus 377 ~~f 379 (379)
T TIGR00881 377 GAF 379 (379)
T ss_pred ccC
Confidence 754
No 147
>KOG2325|consensus
Probab=99.59 E-value=1.2e-13 Score=116.47 Aligned_cols=187 Identities=17% Similarity=0.262 Sum_probs=151.3
Q ss_pred ccccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHh-hhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-hhHHHH
Q psy11010 54 SRESRRLVLVIVAIALVLDNMLLTTVEDVARENRHK-YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFT 131 (256)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~ 131 (256)
.++.+|+.+.+..+..++.....+.+.+-.-+|+++ |.+.+.+..|++.++..++.+++++.+|+++.|.+. |+.++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 345678888888899999888888888776666544 477788899999999999999999999999999986 888899
Q ss_pred HHHHHHHHHHHH-Hh---hc-hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 132 GFVIMFLSTLIF-AF---GR-TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 132 ~~~~~~~~~~~~-~~---~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
+.++.+++.++. +. .+ ..+.++++|++.|+|.|.... .-+|+++.... ++|.++++....+..+|.++||.+.
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~-~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAV-LRAYIADASTV-EDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCc-cchHHHHHHhhhHHHHHHHHhHHHH
Confidence 999999999888 33 23 678899999999999876544 58899998776 8999999999888888888888887
Q ss_pred hhhhhc------------c-CchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 207 GIMYQF------------V-GKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 207 ~~l~~~------------~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
..+..- + -+..+-|+.+++.++..+++.+..+|..+
T Consensus 186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 654321 1 15667788888888888888777766544
No 148
>KOG0569|consensus
Probab=99.59 E-value=1.3e-13 Score=117.02 Aligned_cols=143 Identities=16% Similarity=0.165 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhhhhchhhhhhhhh
Q psy11010 98 VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---GRTYGVLFLARSLQGIGSSCSSVSGMGML 174 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 174 (256)
.+.+++++.+|.++|+.+.|+++||+|||..+.++.++..++.++..+ .+++..++++|++.|+..|......+-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 466788999999999999999999999999999998888888776665 56788999999999999999999999999
Q ss_pred hhcccCcchhhHHHHHHHHHHHHHHhhhhhHHh--hhhhccCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 175 AERYPDDRERGNAMGIALGGLALGVLIGPPFGG--IMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 175 ~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~--~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.|..|+ +.||....+.+.+..+|..++..++. .+-+...|++.+....+++++..++. .+.||+|+
T Consensus 142 ~E~sP~-~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk 209 (485)
T KOG0569|consen 142 TEISPK-NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPK 209 (485)
T ss_pred hhcChh-hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcc
Confidence 999998 99999999999999999999977764 23344569999999988888865554 44666665
No 149
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.59 E-value=6.6e-14 Score=119.00 Aligned_cols=163 Identities=11% Similarity=0.073 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHhHhhhchhhhHHHHHh-hhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhH-HHHHHHHHHHHH
Q psy11010 63 VIVAIALVLDNMLLTTVEDVARENRHK-YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLP-MFTGFVIMFLST 140 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~-l~~~~~~~~~~~ 140 (256)
+...+..+........+...+|.++++ ..+.+..+.+...+...++..++.++.|+++||+++|+. +....++..++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 334444444445555566678888755 246677888999999999999999999999999997774 444444444444
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPF 219 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~ 219 (256)
++....++....+.+..+.++|.....+.......|.+|+ ++|++++|+.+....+|.+++|.+.+.+.+..| |++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~ 403 (412)
T TIGR02332 325 LLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL-QARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGL 403 (412)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccch-HHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhH
Confidence 3332333322222222333333333334444555678898 999999999999999999999999999999875 99998
Q ss_pred HHHHHHH
Q psy11010 220 LILSALA 226 (256)
Q Consensus 220 ~~~~~~~ 226 (256)
++.+++.
T Consensus 404 ~~~~~~~ 410 (412)
T TIGR02332 404 WFVAALL 410 (412)
T ss_pred HHHHHHH
Confidence 8766654
No 150
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.59 E-value=1.4e-13 Score=119.85 Aligned_cols=138 Identities=17% Similarity=0.091 Sum_probs=96.4
Q ss_pred HHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 103 GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 103 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
.+..++..++.++.++++||+|||++++.+.++.+++.++.++.. +...+....+...++.....+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 344456667888899999999999999888877777766555422 1111111111122222234455677889999
Q ss_pred cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc----------cCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF----------VGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 179 ~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
|+ +.|+++.|+.+....+|.+++|.+.+.+.+. .++...|++.+++.+++.+. .++.||++.
T Consensus 422 p~-~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~ 493 (502)
T TIGR00887 422 PT-RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKG 493 (502)
T ss_pred ch-hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCC
Confidence 98 9999999999999999999999999998873 34566788888777776554 455666544
No 151
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.59 E-value=1.5e-13 Score=116.65 Aligned_cols=158 Identities=15% Similarity=-0.055 Sum_probs=121.4
Q ss_pred hhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh-----chHHHHHH
Q psy11010 80 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-----RTYGVLFL 154 (256)
Q Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~ 154 (256)
....|.+..+++|.++.+.++......++..++.++.|+++||+++|+.+..+.++.+++.++..+. .+.+.+++
T Consensus 235 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 235 IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 3445666677889999999998888888899999999999999999999999888887777766542 34566677
Q ss_pred HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhh
Q psy11010 155 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 155 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
..++.|++.+...+........ .++ ++||+..+.++....+|..+|+.+++.+.+..++....+..++..++..+...
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLF-SSD-VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhh-hcc-ccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888999998887776665543 344 89999999999999999999999999999887766555555544444434333
Q ss_pred heeec
Q psy11010 235 YTIVQ 239 (256)
Q Consensus 235 ~~~~~ 239 (256)
...++
T Consensus 393 ~~~~~ 397 (406)
T PRK15402 393 IFLKD 397 (406)
T ss_pred HHhcc
Confidence 33333
No 152
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.59 E-value=2.5e-13 Score=114.38 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=133.5
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhc-CcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLM-GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
.+..++.+.....+..+.+.|++ +.| .+....+.+.++..+..++.-.+.+++..|+|.|+++.++.+..++=..+++
T Consensus 213 ll~~~l~~~~~~~~~~f~~~yl~-~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 213 LLAAFLIGISHAAYYTFFSIYLQ-ELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455555556666764 455 7777888888999999999999999999999999999999999999999988
Q ss_pred hh-chHHHHHH----HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHH-HHHHHHhhhhhHHhhhhhccCch--
Q psy11010 145 FG-RTYGVLFL----ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPPFGGIMYQFVGKT-- 216 (256)
Q Consensus 145 ~~-~~~~~~~~----~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~-~~~lg~~~g~~i~~~l~~~~g~~-- 216 (256)
.. ++.+...+ ...+.|+..+........++.+..|+ +.|+++.++++. ..++|..+|..++|++.|+.|-+
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~-~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~ 370 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP-ELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM 370 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh
Confidence 87 45444333 34569999999999999999999998 999999999765 57899999999999999987644
Q ss_pred ----HHHHHHHHHHHHHHhHhhheeec
Q psy11010 217 ----APFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 217 ----~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
..+.+.+++.++..++.+++.+|
T Consensus 371 ~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 371 FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45556666666655555554443
No 153
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.58 E-value=2.1e-13 Score=116.63 Aligned_cols=160 Identities=16% Similarity=0.068 Sum_probs=105.8
Q ss_pred hHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH--h--hchH
Q psy11010 74 MLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA--F--GRTY 149 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~--~--~~~~ 149 (256)
...+.....+|.++.+++|.+..+.+...++..++..+++++.|+++||+|||+.+..+.++.++..+... . .++.
T Consensus 257 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (432)
T PRK10406 257 LCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSP 336 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 33444556678888788899988999999998888899999999999999999988776654433332111 1 2233
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHH-HHHhhhhhHHhhhhhccC-chHHHHHHHHHHH
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLA-LGVLIGPPFGGIMYQFVG-KTAPFLILSALAL 227 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~-lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~ 227 (256)
...+....+.+++.+...+....+++|.+|+ +.|++++|+.+...+ +.+...|.+.+.+ +..| |...+++.++..+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~-~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 337 YAAFGLVMCALLIVSFYTSISGILKAEMFPA-QVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 3222222223333334445567889999998 999999999766544 3344577877755 4445 6556666656666
Q ss_pred HHHhHhhh
Q psy11010 228 GDGCKCNY 235 (256)
Q Consensus 228 ~~~~~~~~ 235 (256)
+..+..++
T Consensus 415 i~~~~~~~ 422 (432)
T PRK10406 415 VAFLVSLM 422 (432)
T ss_pred HHHHHHHH
Confidence 65554444
No 154
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=6.5e-14 Score=118.41 Aligned_cols=149 Identities=13% Similarity=0.079 Sum_probs=122.4
Q ss_pred hhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHhhhhchhh
Q psy11010 90 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 90 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~ 168 (256)
+.+.+....+++.+...+.....+++.|++.||+++|+.+..+.++..++.+...+. ++.+.+.+..++.|+|.+...|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p 317 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAP 317 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHh
Confidence 456667778888888888888888999999999999999999988888888777654 5666677788899999988888
Q ss_pred hhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 169 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
...+++.+..|+ +.|+++.+..+ ...+|..+||.++|.+.|+.|....|++.+....+..++..+..+++
T Consensus 318 ~~~~~~~~~~p~-~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (395)
T PRK10054 318 GEYMLIDHIAPP-GMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRAR 387 (395)
T ss_pred hHHHHHHHhCCc-ccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccC
Confidence 888999999998 99999988765 56689999999999999999998888887777666555555433333
No 155
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.58 E-value=2e-13 Score=114.91 Aligned_cols=153 Identities=16% Similarity=0.059 Sum_probs=113.9
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-GRTYGVLFLARSLQ 159 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 159 (256)
...++++.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFIC 299 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34455666778999999999999999999999999999999999999999888888887765543 44555556666666
Q ss_pred Hhhhhchhhhhhh-hhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-cCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 160 GIGSSCSSVSGMG-MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 160 G~~~g~~~~~~~~-~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
+++.....+.... ...+..++ +.++.+. .+....+|..+||.++|++.+. .+|++.+.+.+++.++........
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 300 CAGLFALSAPLQILLLQNAKGG-ELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHhhhHHHHHHHHHhCCcc-hHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 7766555554443 34444444 5565543 4667889999999999999985 679999998877766655544443
No 156
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.58 E-value=3.2e-13 Score=108.63 Aligned_cols=174 Identities=19% Similarity=0.186 Sum_probs=148.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
+..+..+.+..+--.-..+.+.|+++.. .+++|.|.+.+|++.++..++..+.+++..++..|+|.++.+..++++.++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~I-r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~ 89 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEI-RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA 89 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHH-HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 3333333333333344555666777664 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc-CchH
Q psy11010 139 STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTA 217 (256)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~-g~~~ 217 (256)
+.++-... +...++.+..+.|.|.+......++++.+.|| |+-+..+|+|.....+|+.+++.+.-.+.++. |||.
T Consensus 90 G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 90 GILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 99998877 67788999999999999999999999999998 68999999999999999999999999988887 7999
Q ss_pred HHHHHHHHHHHHHhHhhhe
Q psy11010 218 PFLILSALALGDGCKCNYT 236 (256)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~ 236 (256)
...+-+.++++.+++.+..
T Consensus 167 aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 167 ALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999988866654443
No 157
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.57 E-value=3.3e-13 Score=113.91 Aligned_cols=176 Identities=14% Similarity=0.171 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHH--HHHHHHHHHHhhhHHHH-hhhhcCchhHHHHHHHHH-H
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVM--FGSKAFVQLLANPLVGI-LTHRVGYSLPMFTGFVIM-F 137 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~g~-l~dr~G~r~~l~~~~~~~-~ 137 (256)
+..+...++.++.......|.+|.++ ++.|.+.+++|.+ ..+..+...+.+|+.++ ..||+|||+.+++...+. .
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l-~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLL-REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHH
Confidence 45566677888888888889999986 5679999999997 46778888889999855 799999998876555332 2
Q ss_pred HHHHHHH---hhch-HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 138 LSTLIFA---FGRT-YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 138 ~~~~~~~---~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
....... ...+ ...++...++.++..+...+...++..|..++ ++++...+....+..+|..+|+.+.+++.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~-~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 82 ACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNG-RTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222222 2222 23334445556666777777778888898887 88888888888888999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
|||..|++.+++.++..+..++..++
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999998888766665555443
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.56 E-value=1.3e-13 Score=119.38 Aligned_cols=156 Identities=11% Similarity=0.094 Sum_probs=111.7
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCch-------hHHHHHHHHHHHHHHHHHhhchHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS-------LPMFTGFVIMFLSTLIFAFGRTYGV 151 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-------~~l~~~~~~~~~~~~~~~~~~~~~~ 151 (256)
.....|.++.+++|.+..+.+.+.++..++..++.+++|+++||++|| ..+....++.++..++....++.+.
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~ 350 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGA 350 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 344567777778899999999999999999999999999999999865 2223333333343444455556655
Q ss_pred HHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHh
Q psy11010 152 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGC 231 (256)
Q Consensus 152 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 231 (256)
..+..++.+++.+...+...+++.+..| +++|.+.|+.+....+|.+++|.+.+ ..+..+|+..|++.+++.+++.+
T Consensus 351 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 351 AIVVMILFSIFVQAACGATFGIVPFVSR--RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHhhhhhcccCcccCh--hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 5556666777666666666677777654 79999999987777777777766644 22234699999999888888776
Q ss_pred Hhhhee
Q psy11010 232 KCNYTI 237 (256)
Q Consensus 232 ~~~~~~ 237 (256)
+.++..
T Consensus 428 ~~~~~~ 433 (476)
T PLN00028 428 PVAFIH 433 (476)
T ss_pred HHHhee
Confidence 665543
No 159
>KOG0253|consensus
Probab=99.56 E-value=8e-14 Score=112.15 Aligned_cols=184 Identities=11% Similarity=0.025 Sum_probs=152.3
Q ss_pred ccccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHH
Q psy11010 54 SRESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGF 133 (256)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~ 133 (256)
..+.++.......+..+...+-... .....+...+..|.+..+..++......+..+++..+|.++|++|||+.+....
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~-~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMML-LSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHH-HHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 3566777777777766655444333 344444457778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 134 VIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+...+..++.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|. .+|..-+-+. ..+.+|.++...+.-.+..+.
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~-~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPS-SHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccC-cCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 88889999999998 8998877777 889999999999998888999
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
||||..........+.+.+ .+..++.++
T Consensus 228 gwr~~l~~~~~pl~~~a~f-~~w~~ESpR 255 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARF-LVWVYESPR 255 (528)
T ss_pred hHHHHHHHHHhHHHHHHHH-HhhcccCcc
Confidence 9999988888665554444 444566554
No 160
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.56 E-value=3e-13 Score=114.67 Aligned_cols=149 Identities=15% Similarity=0.099 Sum_probs=106.6
Q ss_pred HHHHHhhhcCcchhHHHHHHHHH-HHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH---Hhh-chHHHHHHHHH-
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKA-FVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFG-RTYGVLFLARS- 157 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~- 157 (256)
++++.+++|.++.+++++..... ++..++.++.|++.||+|+|+.+..+.++..+..+.. ++. ++.+.+++..+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 33456778999999999987655 4688999999999999999998877776655554332 343 45555555544
Q ss_pred ---HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhh
Q psy11010 158 ---LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 158 ---l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
..|++.+...+....++.+.+|. +++ ++++...++|..+++.++|.+.++.||+..|.+.+++++++.++.+
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSA-TQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcH-HHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 44555555566666677777665 544 5555556677776777899999999999999999988888766654
Q ss_pred hee
Q psy11010 235 YTI 237 (256)
Q Consensus 235 ~~~ 237 (256)
...
T Consensus 388 ~~~ 390 (402)
T PRK11902 388 LMR 390 (402)
T ss_pred HHh
Confidence 433
No 161
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.56 E-value=1e-12 Score=111.14 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=116.9
Q ss_pred hhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHh
Q psy11010 82 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 161 (256)
Q Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 161 (256)
..++++.+++|.+..+.+.+.....++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|+
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33333456789999999999999999999999999999999654444444333344444555556677777788899999
Q ss_pred hhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 162 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
+.+...+...+++.+..| +++++..+......++|..+||.++|++.+..|++..+...+++.++..+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA--DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHhhhHHHHHHHHHHCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 999999999999999886 456677888888889999999999999999999998888877766554443
No 162
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.55 E-value=2.2e-13 Score=111.71 Aligned_cols=172 Identities=19% Similarity=0.158 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+....++.++..=+.+.+......+-..++|++..+...+.....+..+++++++|+|.||+|.|+++..+.++..+.+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 44444555555555555666666777777999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPF 219 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~ 219 (256)
+...+......++++-.+.|...|..++..-++..+..|+ ++-++.+|+++.....+.++||.+.+.+.+..| -|..+
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~-~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPK-GKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCC-ccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 8777777677788888999999999999999999999998 999999999999999999999999999998765 67777
Q ss_pred HHHHHHHHHHHhHh
Q psy11010 220 LILSALALGDGCKC 233 (256)
Q Consensus 220 ~~~~~~~~~~~~~~ 233 (256)
....++..++.++.
T Consensus 412 ~~i~vll~iGl~~L 425 (438)
T COG2270 412 LSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHhhHhhE
Confidence 77666666654443
No 163
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.54 E-value=4.6e-13 Score=111.53 Aligned_cols=151 Identities=17% Similarity=0.240 Sum_probs=133.1
Q ss_pred cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhh
Q psy11010 92 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGM 171 (256)
Q Consensus 92 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 171 (256)
+.+...+|.+.++.-+..++...+..++.+|+|.|+.++++..++.+=..+++++++.+.+.+.+.+-|+-.........
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCcchhhHHHHH-HHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 172 GMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~-~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
-++++.+|+ |..++...+ .+.+.++|.++.+.++|.+.|+.|++.+|++.+.+.+...++..+.++++++.
T Consensus 335 kYI~~~fd~-rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 335 KYITAHFDK-RLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHS-G-GGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHhCCH-hHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999997 888888888 57899999999999999999999999999999999888888888777665544
No 164
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.53 E-value=3.5e-13 Score=116.34 Aligned_cols=177 Identities=16% Similarity=0.040 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHH--------H
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM--------F 130 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l--------~ 130 (256)
+..++...+..+............+|.++.+.+|.+..+.++..++..++..++.++.|+++||+++|+.. .
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIF 339 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 33455555555665566666666788888888999999999999999999999999999999998654221 1
Q ss_pred HHHHHH--HHHHHHHHh-hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHh
Q psy11010 131 TGFVIM--FLSTLIFAF-GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 207 (256)
Q Consensus 131 ~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~ 207 (256)
.+.... ++..+.... ..+....++...+.+.+.+...+.......|..| +.+|.+.++.+....+|.+++|.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~l~~~i~p~l~g 417 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP--RFLGFIKGITGLPGFIGGLIASTLAG 417 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh--hHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111111 111111222 2334444444555555555555555555566665 68999999999999999999999999
Q ss_pred hhhhcc---CchHHHHHHHHHHHHHHhHhhhee
Q psy11010 208 IMYQFV---GKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 208 ~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
.+.+.. +|...|.+.++..++..++..+..
T Consensus 418 ~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 418 NILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 987653 388899998888888766555433
No 165
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.52 E-value=1.6e-12 Score=108.31 Aligned_cols=139 Identities=14% Similarity=0.102 Sum_probs=109.1
Q ss_pred hHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-CchhHHHHHHHHHHHHHHHHHhhchHHHH
Q psy11010 74 MLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMFLSTLIFAFGRTYGVL 152 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
..........|.+++ +.|.+..+.+.+.+...++.++++++.|++.||+ +||+.+..+.++.+++.+.+.+..+....
T Consensus 211 ~~~~~~~~~lp~~~~-~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T TIGR00896 211 GLYYSLIGWLPAILI-SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLW 289 (355)
T ss_pred HHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 333344456677764 5799999999999999999999999999999999 56667777777777777766665443322
Q ss_pred HHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 153 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 153 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
...++.|++.+..++...+.+.+..+++++++...++.+....+|..++|.+.|++.++.|
T Consensus 290 -~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 290 -AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2456789999999988778777665532677899999998889999999999999999876
No 166
>PRK09669 putative symporter YagG; Provisional
Probab=99.52 E-value=8e-13 Score=113.50 Aligned_cols=176 Identities=15% Similarity=0.073 Sum_probs=127.1
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh----cCc-hhHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGY-SLPMFTGFVIMFLS 139 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~-r~~l~~~~~~~~~~ 139 (256)
..+..+..+........+++.++.+.+|+++.++|.+..+..+..++..|+.|+++|| +|| |+.++++.+..++.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 3344444444444455567777889999999999999999999999999999999998 776 45566676777666
Q ss_pred HHHHHhhc------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh--
Q psy11010 140 TLIFAFGR------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-- 211 (256)
Q Consensus 140 ~~~~~~~~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~-- 211 (256)
.++....+ ....+++...+.+.+......+..++.+|+.+++++|.+..+.......+|..+++.+...+..
T Consensus 94 ~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 94 CLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65544433 2455566666777777777777889999998544889998888888888887777665543332
Q ss_pred -----ccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 212 -----FVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 212 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..+|+..+.+.+++.++..+..++..+|+
T Consensus 174 ~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 174 GKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 24688888888887777666555555543
No 167
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.51 E-value=9e-13 Score=125.43 Aligned_cols=151 Identities=14% Similarity=0.105 Sum_probs=126.8
Q ss_pred hhchhhhHHHHHhhhcCcch-hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q psy11010 77 TTVEDVARENRHKYLMGETK-AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLA 155 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
......++.++.+.+|.+.. ..+++.+...++.+++.++.|+++||+++++++.++.++.+++.++..+..+.+.++++
T Consensus 249 ~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (1146)
T PRK08633 249 QLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVL 328 (1146)
T ss_pred HHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 33445567777888999998 99999999999999999999999999999999999888888888888887888888888
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc-cCchHHHHHHHHHHHH
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALG 228 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~-~g~~~~~~~~~~~~~~ 228 (256)
.++.|++.+...+...+++.+..|+ +.||+++|+.++...+|.++++.+++.+... .++...|++.+.+.++
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~p~-~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 329 FFLFGFSAGLFIVPLNALIQFRAPE-KELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHHHHhhHHHHHHHhhcCCc-cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999999999999998888887766542 3455556655554443
No 168
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.51 E-value=8.8e-13 Score=114.30 Aligned_cols=144 Identities=13% Similarity=0.137 Sum_probs=120.7
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh---
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF--- 145 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~--- 145 (256)
.++............|.++++.+|.++.+.++......++..++.++.|++.||+|||+.+..+.++.+++..+..+
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (485)
T TIGR00711 264 MSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT 343 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 33333444444456777888888999999999999999999999999999999999999999999888888877662
Q ss_pred -hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 146 -GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 146 -~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
..+.+.+....++.|++.+...+.......+..|+ ++|+++.|+.+....+|..+|+.+.+.+.++.
T Consensus 344 ~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 344 PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-HKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23456667778899999998888878888888998 99999999999999999999999999988753
No 169
>TIGR00898 2A0119 cation transport protein.
Probab=99.50 E-value=9.1e-13 Score=114.93 Aligned_cols=138 Identities=18% Similarity=0.167 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHhhhhchhhhhhhhhhhc
Q psy11010 100 VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY--GVLFLARSLQGIGSSCSSVSGMGMLAER 177 (256)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 177 (256)
+...+..+...++.++.+++.||+|||+.+..+.++.+++.++..+.++. +...+..++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445567778888999999999999999999999888888877765543 4445556667777777888889999999
Q ss_pred ccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 178 YPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 178 ~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+|+ +.|++++|+.+....+|.+++|.+.+ + +..++..++++.+++.++..++.++ .|+++
T Consensus 439 ~p~-~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 498 (505)
T TIGR00898 439 YPT-VVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPETK 498 (505)
T ss_pred ccH-HHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCCC
Confidence 998 99999999999999999999999998 4 4456677888888877776665544 45433
No 170
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.50 E-value=1.2e-12 Score=110.83 Aligned_cols=150 Identities=23% Similarity=0.229 Sum_probs=117.0
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh-hcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-RVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 159 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (256)
...|.+.++..+ ++.+.+++.++..++...+..+.+++.| |++.++.+..+.++.+++.++.++.++.+.+.+..++.
T Consensus 229 ~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 307 (400)
T PRK11646 229 LMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF 307 (400)
T ss_pred HhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 345666655444 6788899988888777766666666665 56767777888888888888887888887777778888
Q ss_pred HhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc---C-chHHHHHHHHHHHHHHhH
Q psy11010 160 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---G-KTAPFLILSALALGDGCK 232 (256)
Q Consensus 160 G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~---g-~~~~~~~~~~~~~~~~~~ 232 (256)
|++.+...|...+++.+..|+ ++||+++|+++....+|..+||.++|++.++. + ....+++.+++.++..+.
T Consensus 308 ~~g~~~~~p~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 308 YIGSIIAEPARETLSASLADA-RARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHccHHHHHHhcCCc-ccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 999888888989999999998 99999999999999999999999999999874 2 345555555555554444
No 171
>PRK10133 L-fucose transporter; Provisional
Probab=99.49 E-value=2.6e-12 Score=110.02 Aligned_cols=146 Identities=12% Similarity=-0.067 Sum_probs=117.2
Q ss_pred hhHHHH-HhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 82 VARENR-HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 82 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
..+.++ ++.+|.++.+.++....+.++..+++++.|++.||+|+|+++..+.++.+++.++..+.++.. .+....+.|
T Consensus 280 ~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g 358 (438)
T PRK10133 280 YLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCS 358 (438)
T ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 345553 566899999999999999999999999999999999999999988887777766666555532 345677899
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHHHHHHh
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGC 231 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~ 231 (256)
++.+..+|...+...+.++ ++.+.+.++... ..+|..++|.+.|.+.+..| .+..|++..+..+....
T Consensus 359 lg~~~i~P~~~s~a~~~~~--~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLG--QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHcccc--hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 456778887764 44688889999999999887 78888766655554333
No 172
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.49 E-value=8e-13 Score=125.71 Aligned_cols=165 Identities=12% Similarity=-0.033 Sum_probs=128.8
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
..+..++..+....+...+|.++.+.+|.++.+.|++.+.+.++.++++++.|+++|+.++++.+..+.++.+++.+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLA 309 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHH
Confidence 33333333444444555678888888999999999999999999999999999999988877766666655555554443
Q ss_pred hh--------------------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhh
Q psy11010 145 FG--------------------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 204 (256)
Q Consensus 145 ~~--------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~ 204 (256)
+. .+.+.++++.++.|++.+...+...+++.+.+|+ ++||+++|+.++...+|..++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~G~v~g~~~~~~~~~~~ig~~ 388 (1140)
T PRK06814 310 FASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANP-AHRARVIAANNVLNAAFMVAGTI 388 (1140)
T ss_pred hcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCc-ccceeeeHHHHHHHHHHHHHHHH
Confidence 32 5667778888999999999999999999999998 99999999999999999999999
Q ss_pred HHhhhhh-ccCchHHHHHHHHHHHHHH
Q psy11010 205 FGGIMYQ-FVGKTAPFLILSALALGDG 230 (256)
Q Consensus 205 i~~~l~~-~~g~~~~~~~~~~~~~~~~ 230 (256)
+.+.+.+ ..++...+++.+++.++..
T Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 389 ILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9998874 4466666665555444433
No 173
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.49 E-value=1.2e-12 Score=113.86 Aligned_cols=144 Identities=16% Similarity=0.173 Sum_probs=119.8
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh-
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF- 145 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~- 145 (256)
+..+.............|.++++.+|.++.+.|.......++..++.++.|++.||+|+|+++..+.++.+++.++..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~ 345 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT 345 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh
Confidence 3333333334344456677888889999999999999999999999999999999999999999898888877765543
Q ss_pred --hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 146 --GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 146 --~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
.++.+......++.|+|.|...+.....+.+..|+ ++++.+.+++++...+|..+|+.+.+.+.+
T Consensus 346 ~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 346 DFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPP-EKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred cCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH-HhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24555666778899999999999889999999998 999999999999999999999999998765
No 174
>KOG0569|consensus
Probab=99.48 E-value=2e-12 Score=109.80 Aligned_cols=160 Identities=14% Similarity=0.019 Sum_probs=126.3
Q ss_pred hhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc----hH--H---HH
Q psy11010 82 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TY--G---VL 152 (256)
Q Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~----~~--~---~~ 152 (256)
.+...+-++.|++..++-+......+...+..+++.++.||+|||+.++.+..++.+..+++.... .. | ..
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344445577899999999999999999999999999999999999999999998888887765421 11 1 12
Q ss_pred HHHHHHHHhhhhc-hhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHh
Q psy11010 153 FLARSLQGIGSSC-SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGC 231 (256)
Q Consensus 153 ~~~~~l~G~~~g~-~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 231 (256)
+++.++..+..+. ..|...-+.+|++|+ +.|..++++.....-+..++-....-.+.+..|- +.|....+.+++..+
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~-~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i 448 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQ-SARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLI 448 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHH
Confidence 3444444444443 367778899999998 9999999999888888888877777777777776 778888888888888
Q ss_pred HhhheeecCCCC
Q psy11010 232 KCNYTIVQKSSS 243 (256)
Q Consensus 232 ~~~~~~~~~~~~ 243 (256)
..++..||++.+
T Consensus 449 ~~~~~lPETkgr 460 (485)
T KOG0569|consen 449 YLYRYLPETKGR 460 (485)
T ss_pred HHHHhCcccCCC
Confidence 888989887754
No 175
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.47 E-value=5.1e-12 Score=106.15 Aligned_cols=138 Identities=14% Similarity=0.193 Sum_probs=104.4
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh-----chHHHHH
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-----RTYGVLF 153 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 153 (256)
.....|.+..+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++..++.+++... ++...+.
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMII 304 (385)
T ss_pred HHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 33445666777889999999999999999999999999999999999999988887777776655542 2334455
Q ss_pred HHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHH-HHhhhhhHHhhhhhccCchHHH
Q psy11010 154 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLAL-GVLIGPPFGGIMYQFVGKTAPF 219 (256)
Q Consensus 154 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~l-g~~~g~~i~~~l~~~~g~~~~~ 219 (256)
...++.|++.+...+.......|..| ++++++.++++..... |.+.+|.+ +.+.+..+|...+
T Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~~~~ 368 (385)
T TIGR00710 305 GPMMFVGIGNSMISSIAMAYALEDFP--HVAGTASALFGTLRLVLGAIVGYLV-SLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCc--ccchHHHHHHHHHHHHHHHHHHHHH-HhccccChHHHHH
Confidence 56778899999988988888888885 5799999998776654 55555554 4554444444333
No 176
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.47 E-value=6.5e-12 Score=106.05 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=98.0
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
...+.+..+++|.++.+.+.+.+...++..++.++.+++.||+|+|+++..+.++..++.++..+.++.+..+....+.+
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLIC 303 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667788999999999999999999999999999999999999999999888888887777665554444445555
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHH
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSA 224 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~ 224 (256)
.|.+...+. ....+..|. ++|+ |.......++..+|+.+++++.++.|+.....+.+.
T Consensus 304 ~g~~~~~~~--~~~~~~~~~-~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 304 AGFSVGFGV--AMSQALGPF-SLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHHhHH--HHHHHhccC-cccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 554444433 333445554 4443 333444556777788888888887777654444444
No 177
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.47 E-value=6.1e-12 Score=106.37 Aligned_cols=153 Identities=12% Similarity=-0.050 Sum_probs=121.1
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
...+.+.++.+|.++.+.|++.+...++..+++++.+++.||.++|+++..+.. .++..++..+.++.+...+..++.|
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G 304 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIG 304 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 344556677789999999999999999999999999999999999988887753 3444445556667776777788899
Q ss_pred hhhhchhhhhhhhhhhcccCcch-hhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRE-RGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~-r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
++.+...+...+.+.+..|+ +. +|++.++.+....+|..++..+.+.+ +..|-+..+.+.++..++.+.+.+.+
T Consensus 305 ~~~g~~~~~~~~~~q~~~~~-~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 305 ALGGFFVVPMNALLQHRGHV-LVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HhhhhhhhhHHHHHHhhCcc-cccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888887654 54 79999999999999999999998855 56787777777666655555554443
No 178
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.47 E-value=4.9e-12 Score=107.65 Aligned_cols=178 Identities=11% Similarity=0.056 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
.+.+..+.++.+...... ...+|.+.++.+ +.........+..+...+.+|++|+++||+|+|+++.++.+.+++
T Consensus 254 ~Wllslly~~tFG~fvg~---s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i 328 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGF---SAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAI 328 (462)
T ss_pred hhHHHHHHHHHHHHHHHH---HHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHH
Confidence 334444444444333333 334555665554 333333344556778889999999999999999999998887777
Q ss_pred HHHHHH-hh-----chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC------c--------------chhhHHHHHHH
Q psy11010 139 STLIFA-FG-----RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD------D--------------RERGNAMGIAL 192 (256)
Q Consensus 139 ~~~~~~-~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~------~--------------~~r~~~~g~~~ 192 (256)
...... .. .+++.+.+..+...++.|........++.+++|+ + ++-|...|+.+
T Consensus 329 ~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~ 408 (462)
T PRK15034 329 FSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS 408 (462)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH
Confidence 654321 11 2455555555555555565666666677777752 0 15678889999
Q ss_pred HHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 193 GGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 193 ~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
....+|+++-|.+.+...+..| +...|+...+..+++.++.++.+.++.
T Consensus 409 a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 409 AIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999988888877655 888999999999998888887665443
No 179
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.45 E-value=6.3e-12 Score=108.46 Aligned_cols=178 Identities=15% Similarity=0.082 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC-----chhHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTGF 133 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~l~~~~ 133 (256)
...+.++...++..+.. .......++++.+++|+++++++...+...+...+ .+++|.++||++ ||+.++.+.
T Consensus 25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~ 102 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSG 102 (468)
T ss_pred chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHH
Confidence 34445555566666666 55555667777888999999999999999999987 555999999997 777777776
Q ss_pred HHH-HHHHHHHHhhchHHHHH-HHHHHHHhhhhchhhhhhhhhhhcccCcchh--hHHHHHHHHHHHHHHhhhhhHHhhh
Q psy11010 134 VIM-FLSTLIFAFGRTYGVLF-LARSLQGIGSSCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 134 ~~~-~~~~~~~~~~~~~~~~~-~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r--~~~~g~~~~~~~lg~~~g~~i~~~l 209 (256)
++. .+.....+..++..... +..++.+++.+.......++..|..++ +++ +...+.......+|..+|+.++|.+
T Consensus 103 ~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~-~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 103 LLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRE-SPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhc-CCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 665 34434444444443333 478889999999999999999999873 332 2234444455668999999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 210 YQFVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 210 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
.+..+|+..|++.+++.++..+. .+..+|+
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~ 211 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFV-SNLSKER 211 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHH-HHhcccc
Confidence 99999999999998888876433 3444553
No 180
>PRK09848 glucuronide transporter; Provisional
Probab=99.45 E-value=2.8e-12 Score=110.26 Aligned_cols=151 Identities=15% Similarity=0.113 Sum_probs=113.4
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
..++.++............+.+.++.+|.++...++......++..++.++.+++.||+|+|+++..+.++.+++.++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~ 312 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFF 312 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344455566666777665555555555677888999999999999999999999988888877776
Q ss_pred hhc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc------chhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 145 FGR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD------RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 145 ~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~------~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
+.+ +.+.+++..++.|+|.+...+...++.+|..+.+ +++|...|+++....+|..+|+.+.+.+.+..||
T Consensus 313 ~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 313 WVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 643 5666677788899999999999999999988641 2358999999999999999999999988776554
No 181
>KOG2504|consensus
Probab=99.44 E-value=2.2e-12 Score=111.45 Aligned_cols=175 Identities=18% Similarity=0.224 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC--chhHHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG--YSLPMFTGFVIMF 137 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~l~~~~~~~~ 137 (256)
+.++.+.+...+....+......++.+. ++.+.+..+.+.+.++.++...++.++.|+++|+.. ++.+..++.++.+
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~-~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYA-KSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 4455555555565666665555677774 588999999999999999999999999999999988 4555667777888
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-ch
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KT 216 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~ 216 (256)
+..+.+++.++++.+...-.+.|++.|.........+.|..+. ++-..+.|+.....+++..+||+++|++.|..| |.
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~-~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL-EKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh-hhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 8888889999999999999999999999999888899999998 999999999999999999999999999999887 99
Q ss_pred HHHHHHHHHHHHHHhHhhhe
Q psy11010 217 APFLILSALALGDGCKCNYT 236 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~ 236 (256)
..|+..++..+++.+..+..
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred eehhhcChHHHHHHHHHHHh
Confidence 99999998888877655443
No 182
>KOG4686|consensus
Probab=99.44 E-value=1.4e-11 Score=96.22 Aligned_cols=176 Identities=16% Similarity=0.226 Sum_probs=129.1
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHH-H
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV-I 135 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~-~ 135 (256)
...+.+.++++++.+..+.+. .+-|.+.++.+|+|+...+.+.+.......+.+++.|.++||+|++...+.+.. .
T Consensus 264 ppfw~~~iicv~yyva~fPFi---~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFI---TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHh---hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 345566666666666554443 345557789999999999999999999999999999999999999977766543 3
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG- 214 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g- 214 (256)
..++=....+ +.+.=+++..+.|+............++...|+ ++.|++.|..++..++|-.+.|+++|.+.++.|
T Consensus 341 tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE-~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 341 TLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPE-EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH-HHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 3333333333 223335667788998888877788999999997 999999999999999999999999999998765
Q ss_pred --chHHHHHH-HHHHHHHHhHhhheeec
Q psy11010 215 --KTAPFLIL-SALALGDGCKCNYTIVQ 239 (256)
Q Consensus 215 --~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (256)
|--+|.+. +.+++. .+.+.+...+
T Consensus 418 y~~le~ffl~~~~~aL~-svgil~~~N~ 444 (459)
T KOG4686|consen 418 YDNLEAFFLIIGLMALT-SVGILFYLNK 444 (459)
T ss_pred hhhHHHHHHHHHHHHHH-HHHHHhheec
Confidence 44444443 344444 3444444433
No 183
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.41 E-value=2e-11 Score=104.43 Aligned_cols=153 Identities=20% Similarity=0.237 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
+..+++..++............+.+.+..+|.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.+
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFL 305 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHH
Confidence 334444455555555555566666766667755 6788888899999999999999999999999999999999999999
Q ss_pred HHHhhc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc------chhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 142 IFAFGR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD------RERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 142 ~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~------~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+..+.+ +.+.+++..++.|++.+.......++++|..+.+ ++.|..+|+++....+|..+++.+.+.+.+..
T Consensus 306 ~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 306 LLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred HHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 888775 8899999999999999999999999999988631 33588899999999999999999999887765
Q ss_pred Cc
Q psy11010 214 GK 215 (256)
Q Consensus 214 g~ 215 (256)
|+
T Consensus 386 Gy 387 (428)
T PF13347_consen 386 GY 387 (428)
T ss_pred Cc
Confidence 44
No 184
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.41 E-value=1.8e-11 Score=106.00 Aligned_cols=176 Identities=13% Similarity=0.062 Sum_probs=126.8
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh----hcCc-hhHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGY-SLPMFTGFVIMFLS 139 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~-r~~l~~~~~~~~~~ 139 (256)
..+..+..+.....+.++++.|+++.+|+++..+|.+..+..+..++..|+.|+++| |+|| |+.++++.+..+++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 344445555666666677788888999999999999999999999999999999999 6698 56666777777777
Q ss_pred HHHHHhhc------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh--
Q psy11010 140 TLIFAFGR------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-- 211 (256)
Q Consensus 140 ~~~~~~~~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~-- 211 (256)
.+++...+ .+..+++...+.+++......+..++.+|..+++++|.+..+.......+|..+.+.+...+.+
T Consensus 91 ~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 91 LFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65554322 1334555566778888888888899999998533899999998777777776666555443322
Q ss_pred -----ccCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 212 -----FVGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 212 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..+|+....+.+++.++..+..++..+|+
T Consensus 171 g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 171 GGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 12466666676666666555555545554
No 185
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.40 E-value=6.8e-11 Score=95.83 Aligned_cols=151 Identities=18% Similarity=0.176 Sum_probs=115.3
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhh
Q psy11010 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 168 (256)
+++|.++.+++.+.........+..++.|.++||+|||+..+..+++.+++++. -..++++.++++|++.|++....+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999998864 4457899999999999999999999
Q ss_pred hhhhhhhhc-----ccCcchhhHHHHHHH-HHHHHHHhhhhhHHhhhhhccCc--hHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 169 SGMGMLAER-----YPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 169 ~~~~~~~~~-----~~~~~~r~~~~g~~~-~~~~lg~~~g~~i~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
..-++.... +|+ +..+..++... ...++-+++...++.++.+..+. ..+|....++.+++.+++....+|.
T Consensus 141 ~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 888865433 232 33333333333 23344445555666667666554 7888888888888777776555554
Q ss_pred C
Q psy11010 241 S 241 (256)
Q Consensus 241 ~ 241 (256)
.
T Consensus 220 y 220 (354)
T PF05631_consen 220 Y 220 (354)
T ss_pred C
Confidence 3
No 186
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.40 E-value=6.2e-12 Score=104.18 Aligned_cols=128 Identities=21% Similarity=0.261 Sum_probs=108.1
Q ss_pred HhhhchhhhHHHHHhhhcCc-chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh---chHH
Q psy11010 75 LLTTVEDVARENRHKYLMGE-TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---RTYG 150 (256)
Q Consensus 75 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~---~~~~ 150 (256)
.........+.++.+++|.+ ..+.+.+.++..++..++.++.|++.||+++|+.+........+..+..... ++..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33334556666667888999 7899999999999999999999999999999888877777777766655543 3456
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhh
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP 203 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~ 203 (256)
..++..++.|++.+...+...+++.|.+|+ ++||++.|+.+...++|..+||
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPP-EYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHT-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHCC
Confidence 677788889999999999999999999998 9999999999999999999987
No 187
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.40 E-value=3.3e-12 Score=109.19 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=131.8
Q ss_pred HhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh----hcCchhH-HHHHHHHHHHHHHHHHhh-
Q psy11010 73 NMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLP-MFTGFVIMFLSTLIFAFG- 146 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~-l~~~~~~~~~~~~~~~~~- 146 (256)
+.........+..+..+.+|+++...|.+..+..+..++..|+.|.++| |+|||+. ++.+.+..+++.+++...
T Consensus 14 ~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~ 93 (428)
T PF13347_consen 14 NMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPP 93 (428)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccc
Confidence 3333334445666778889999999999999999999999999999999 8996655 457778888887777654
Q ss_pred c-------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc------
Q psy11010 147 R-------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV------ 213 (256)
Q Consensus 147 ~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~------ 213 (256)
+ ....+.+..++..++......+..++..|..+++++|.+..+..+....+|..+...+.+.+.+..
T Consensus 94 p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~ 173 (428)
T PF13347_consen 94 PAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTS 173 (428)
T ss_pred cchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence 3 233456677778999999999999999999985479999999988888888876666666555321
Q ss_pred -CchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 214 -GKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 214 -g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+|++..++.+++.++..++..+..+|
T Consensus 174 ~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 174 NGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 58999999999988888888777777
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.40 E-value=2.7e-11 Score=101.45 Aligned_cols=165 Identities=15% Similarity=0.017 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc---hhHHHH-HHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY---SLPMFT-GFVIMF 137 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~---r~~l~~-~~~~~~ 137 (256)
++.+.+..+........+...+|.+++ +.|.+.. .+....+..+...++ .++++||..| |+.... ..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHH
Confidence 344444444445555555667888874 4677654 566666666555555 4677777654 333332 344444
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchH
Q psy11010 138 LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTA 217 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~ 217 (256)
+...+.++..+....++...+.|++.....+...++.+|.+|+ +.|+++.|+.+....+|++.+|++.+.+.. |...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~ 345 (368)
T TIGR00903 269 AFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK-ELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEA 345 (368)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch-hhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHH
Confidence 4444555555554445556667777777778788999999998 999999999999999999999999988774 6777
Q ss_pred HHHHHHHHHHHHHhHhh
Q psy11010 218 PFLILSALALGDGCKCN 234 (256)
Q Consensus 218 ~~~~~~~~~~~~~~~~~ 234 (256)
.|.+.++..+++.+..+
T Consensus 346 ~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 346 YFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888777666654
No 189
>PRK11462 putative transporter; Provisional
Probab=99.39 E-value=3.8e-11 Score=103.48 Aligned_cols=177 Identities=12% Similarity=0.042 Sum_probs=130.7
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh----cCch-hHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFL 138 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r-~~l~~~~~~~~~ 138 (256)
...+..+..+.........+..+..+..|+++..+|.+..+.-+.-++.-|+.|+++|| +||| +.++++.+..++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 33344444445555555566777789999999999999999999999999999999996 6876 445567677777
Q ss_pred HHHHHHhhch------HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 139 STLIFAFGRT------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 139 ~~~~~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
+.+++...++ ...+++...+..++......+..++.+|..+..++|.+..++...+..+|..+++.+...+.+.
T Consensus 93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666554332 3445566667788888888889999999988658999999999999998888887776554443
Q ss_pred -------cCchHHHHHHHHHHHHHHhHhhheeecC
Q psy11010 213 -------VGKTAPFLILSALALGDGCKCNYTIVQK 240 (256)
Q Consensus 213 -------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
.+|+....+.+++.+++..+.++..+|+
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 2577777777777666655555545544
No 190
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.39 E-value=6.1e-11 Score=95.65 Aligned_cols=168 Identities=16% Similarity=0.103 Sum_probs=136.4
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-CchhHHHHHHHHHHHHHHHHHhhc
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMFLSTLIFAFGR 147 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~~~~~~~~~~~~~~~~~ 147 (256)
.-+++..++.....+|.+. .|.|+|+.+.|++.+...+......+....+.+|. .+|+..+....++.++.+.+.+.+
T Consensus 217 mGlqS~~~Y~~~~WLP~il-i~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAIL-IDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred HHhhHHHHHHHHHHHHHHH-HHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 3345566666677888875 66799999999999999999999999999999965 578888888889999988887776
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHH
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALA 226 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 226 (256)
....+.- -++.|+|.|..++....++.+..++.++-++-.|+.+...++=+.+||.+.|++.|..| |+......+...
T Consensus 296 ~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 296 GQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred hhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 4433333 48999999999999999999988764666777888888888888999999999999875 998888877777
Q ss_pred HHHHhHhhheee
Q psy11010 227 LGDGCKCNYTIV 238 (256)
Q Consensus 227 ~~~~~~~~~~~~ 238 (256)
++..+.-+..-+
T Consensus 375 i~m~i~Gl~a~r 386 (395)
T COG2807 375 LLMLIFGLRAGR 386 (395)
T ss_pred HHHHHHHhhcch
Confidence 776666555443
No 191
>KOG0253|consensus
Probab=99.39 E-value=8.2e-12 Score=100.78 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=105.2
Q ss_pred HHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchh
Q psy11010 105 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER 184 (256)
Q Consensus 105 ~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r 184 (256)
..+....+.++.+++.||+|||+.+..+++++++..++...+.+-..+.+..+..-++..+.+.+.+.|..|.+|. +.|
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPT-avR 468 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPT-AVR 468 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccch-hhh
Confidence 3455677889999999999999999999999999998887765444444444444455566677789999999999 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 185 GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 185 ~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+++.|.-..+..+|+++.|.++ +.....-..+..+.+.+++++.+...++..+++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 9999999999999999999998 333344556677778888887777776655544
No 192
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.38 E-value=4.9e-11 Score=93.37 Aligned_cols=175 Identities=16% Similarity=0.119 Sum_probs=124.3
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
||..+....+.....+..+ . .+...+.+++.+|.+.++...+.+...+|..+ .++.|.+.|++|++.++.+|.+...
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y-~-Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTY-T-FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred ChhhHHHHHHHHHhcCccc-c-hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 3444444444444433222 2 23444456889999999999999999999886 5888999999999999999999999
Q ss_pred HHHHHHHhh-------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh
Q psy11010 138 LSTLIFAFG-------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY 210 (256)
Q Consensus 138 ~~~~~~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~ 210 (256)
+|+.+...+ .+++.+.+..++.|.+.+...........+.|| ++||++.|+.-...++++.+-..+...+.
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP--~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP--RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc--cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 998877642 356777777777878777777776677778887 68999999999999998888777777666
Q ss_pred hccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 211 QFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 211 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
+...-...+.......+++.+...+..
T Consensus 156 ~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 156 GDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred CCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 653334333333334444333334433
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.37 E-value=2.5e-11 Score=101.29 Aligned_cols=174 Identities=15% Similarity=0.169 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH--HH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF--LS 139 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~--~~ 139 (256)
.+......+...+..+...|+.+.++++..|++++++|.+.++..+...+.+|+.|.++||+|.||-++....+.. .+
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~ 88 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFG 88 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 3333444444455577778899999888899999999999999999999999999999999997776554433222 22
Q ss_pred H-HHHHhh----chHH-HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 140 T-LIFAFG----RTYG-VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 140 ~-~~~~~~----~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
. +...+. .|.+ ..+++....|+......|..-+++.+.. ++.+.-.|-.....++|.+++..++|.+.+.
T Consensus 89 pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s---r~~~feYG~~R~wGSig~ai~s~~~G~L~~i- 164 (412)
T PF01306_consen 89 PFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS---RRNGFEYGRARMWGSIGFAIASLLAGILFNI- 164 (412)
T ss_dssp HHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH---HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH---HHhcCCcchHHHHhhHHHHHHHHHhheeeee-
Confidence 2 222222 2221 2223333344445555555555555554 5556667778888999999999999999874
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+....||+.....++..++.++..++
T Consensus 165 ~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 165 NPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 55677887666655555555555443
No 194
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.37 E-value=2.1e-11 Score=101.62 Aligned_cols=126 Identities=12% Similarity=0.094 Sum_probs=100.9
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHH-HHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh-
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKA-FVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG- 146 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~- 146 (256)
.++............+.++.+ +|.++++.+.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~ 296 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLA 296 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444555667777655 8999999998888766 5778999999999999999999988888877776655442
Q ss_pred ----------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHH
Q psy11010 147 ----------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLA 196 (256)
Q Consensus 147 ----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~ 196 (256)
++.+.+..+.++.+++.+...+...+++.|.+|+ ++||+.+|+++...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 297 SNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP-KFGATQMALLSSLSA 355 (356)
T ss_pred hcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHh
Confidence 3456677788889999999999999999999998 999999999887654
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.36 E-value=8.1e-11 Score=98.74 Aligned_cols=132 Identities=14% Similarity=0.141 Sum_probs=92.2
Q ss_pred HhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH---Hh-hchHH
Q psy11010 75 LLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AF-GRTYG 150 (256)
Q Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~---~~-~~~~~ 150 (256)
.........+.+..+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..+..+.. .. ..+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
T PRK11102 209 GMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFW 288 (377)
T ss_pred HHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 333344455666677789999999999999999999999999999999999999988876544433222 22 22344
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHH-HHHHHHhhhhhHHhh
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPPFGGI 208 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~-~~~lg~~~g~~i~~~ 208 (256)
...++..+.+.+.+........++.|..| ++++++.++.+. ...+|..+++.+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 289 ALVVGVAAFVGCVSMISSNAMAVILDEFP--HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcccc--ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44445555555555555666667777765 689999998655 355777777776543
No 196
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.35 E-value=7.3e-11 Score=102.13 Aligned_cols=177 Identities=18% Similarity=0.169 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcch----hHHHHHHHHHHHHHHhhhHHHH----hhhh-cCchhHH--
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETK----AVGVMFGSKAFVQLLANPLVGI----LTHR-VGYSLPM-- 129 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~g~----l~dr-~G~r~~l-- 129 (256)
.+..+++...+....+....+.++.+..++.+.+.. ..+++.++..+..++.+++..+ +.|| .+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 344444444444555555555556665554443322 2678999999999988888664 4544 3334433
Q ss_pred HHHHHHHHHHHHHHHh---------hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHh
Q psy11010 130 FTGFVIMFLSTLIFAF---------GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL 200 (256)
Q Consensus 130 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~ 200 (256)
.+|.++.+++.+..++ ..|++++++..++.|+|.....|...+++.+..|+ +.||+++|++.....+|..
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~-~~~g~~~g~~~l~~~~g~~ 431 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ-RLMGQMLGMWFLAQAMGSL 431 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHH
Confidence 7788888888877664 45889999999999999999999999999999998 9999999999999999999
Q ss_pred hhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheee
Q psy11010 201 IGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 201 ~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
+++.+.....+..+|...|...++..++..++.++..|
T Consensus 432 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 432 LGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877778888888888888877766655443
No 197
>PRK11043 putative transporter; Provisional
Probab=99.33 E-value=1.8e-10 Score=97.53 Aligned_cols=136 Identities=7% Similarity=-0.027 Sum_probs=102.4
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH---Hh--hchHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AF--GRTYGVLFLA 155 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~ 155 (256)
...|.+. ++.|.++.+.++......++..++..+.+++.||+|+|+.+....+..+++.+.. .. .++...+++.
T Consensus 224 ~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 224 TGSPFIL-EQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHhHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 3455554 5689999999998888889999999999999999999987655554444443322 22 3445555666
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHH
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPF 219 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~ 219 (256)
..+.|++.+..++...+...+..| ++++++.|+++.....+...++.+.+.+.+.......+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP--QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc--ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 777888888888888888777775 68999999999988888889999999887754444433
No 198
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.32 E-value=6.3e-11 Score=102.60 Aligned_cols=151 Identities=13% Similarity=0.057 Sum_probs=108.3
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~ 143 (256)
.+....++............+.+.+...+ ++...+++.+...++.+++.+++++++||+|+|+.+..+.++.+++.+..
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVL 313 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 33333333333444333444444333333 45667777887788999999999999999999999998887766665544
Q ss_pred Hh-----hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc------chhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 144 AF-----GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD------RERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 144 ~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~------~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
.+ .++.+.+++..++.|++.+...+...++++|..+.+ +..|..++.......+|..+++.+.|++.+.
T Consensus 314 ~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 314 LLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 345566677778899999999998899999986520 3346688999999999999999999998876
Q ss_pred cCc
Q psy11010 213 VGK 215 (256)
Q Consensus 213 ~g~ 215 (256)
.|+
T Consensus 394 ~Gy 396 (473)
T PRK10429 394 IGY 396 (473)
T ss_pred cCC
Confidence 655
No 199
>PRK09669 putative symporter YagG; Provisional
Probab=99.28 E-value=8.2e-11 Score=101.08 Aligned_cols=121 Identities=13% Similarity=0.122 Sum_probs=94.7
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH-h-hchHHHHHHHHHHHHhhhhchhhhhhh
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA-F-GRTYGVLFLARSLQGIGSSCSSVSGMG 172 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~G~~~g~~~~~~~~ 172 (256)
+...+.+.....+...++.+++++++||+|+|+.+..+.++.++..+... . .++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566667778888889999999999999999888776665433222 2 356667777888999999999999999
Q ss_pred hhhhcccC------cchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 173 MLAERYPD------DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 173 ~~~~~~~~------~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
+++|..+. ++..|...+.++....+|..+|+.++|.+.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998752 13346778899999999999999999999887766
No 200
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.28 E-value=5.2e-10 Score=95.11 Aligned_cols=144 Identities=10% Similarity=0.013 Sum_probs=107.0
Q ss_pred hchhhhHHHHHhh-hcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q psy11010 78 TVEDVARENRHKY-LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 156 (256)
Q Consensus 78 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
...+.++.|..+. .+.+....+...+.+..+..+++++.+++.||+++|+++.+..++.++..++..+.++... ....
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l 328 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCL 328 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHH
Confidence 3445666665432 2444444555677777888999999999999999999999988888888888877766443 5677
Q ss_pred HHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc------CchHHHHHHHHH
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV------GKTAPFLILSAL 225 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~------g~~~~~~~~~~~ 225 (256)
.+.|++.+..+|...++..+..++ +.+....++.. +. +|+.+.|++.|++.|.. +.+..|++..+.
T Consensus 329 ~~~glf~s~~fp~i~sl~~~~~g~-~~~~~s~~l~~-~~-~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 329 TLCSAFMSLMFPTIYGIALKGLGQ-DTKYGAAGLVM-AI-IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHHHH-HH-hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 788899999999999999999975 44433333333 33 89999999999999954 477777764443
No 201
>KOG3762|consensus
Probab=99.28 E-value=2.9e-11 Score=101.90 Aligned_cols=167 Identities=17% Similarity=0.089 Sum_probs=144.9
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG 146 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~ 146 (256)
+...+.+.....+..++-.+ .++++..+...|........+-++.-++.+++..|+|+-+++..++.+..+-++..++.
T Consensus 378 ~~av~mG~g~~lv~tFLfWH-led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWH-LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 33444455555566666555 47778788888988888888999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHH-HHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHH
Q psy11010 147 RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIA-LGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 225 (256)
Q Consensus 147 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~-~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~ 225 (256)
.|.|..+...+++|+..+.++.+..+|++...|| +.|.++.++. ....++|..+|.+++|.+.+.+|-+..|.+.++.
T Consensus 457 ~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp-~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 457 QNPWMVLPIEILQGITHALIWAAIISYASHVAPP-GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC-cchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 9999999999999999999999999999999999 9999999996 5567899999999999999999999999998888
Q ss_pred HHHHHhHhhh
Q psy11010 226 ALGDGCKCNY 235 (256)
Q Consensus 226 ~~~~~~~~~~ 235 (256)
+++.+++...
T Consensus 536 cl~~l~~~~~ 545 (618)
T KOG3762|consen 536 CLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHH
Confidence 8876665543
No 202
>PRK09848 glucuronide transporter; Provisional
Probab=99.27 E-value=4.5e-10 Score=96.64 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc----CchhHH-HHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV----GYSLPM-FTGFVI 135 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----G~r~~l-~~~~~~ 135 (256)
......+..+..+.......++++.|+++..|+++.++|.+..+..+..++..++.|+++||. |||+.+ .++.+.
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~ 88 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP 88 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH
Confidence 334444455555555555566667788888999999999999999999999999999999996 766654 555554
Q ss_pred HHHHHHHH-Hh----hc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHH-----HHHHhhhh
Q psy11010 136 MFLSTLIF-AF----GR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGL-----ALGVLIGP 203 (256)
Q Consensus 136 ~~~~~~~~-~~----~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~-----~lg~~~g~ 203 (256)
..+..++. .. .. ....+++...+.+++.+...++..++..+..+++++|.+..+....+. .++..++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p 168 (448)
T PRK09848 89 LMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGP 168 (448)
T ss_pred HHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433332 21 11 223344455678888888888888888887765367888777665433 34555666
Q ss_pred hHHhh
Q psy11010 204 PFGGI 208 (256)
Q Consensus 204 ~i~~~ 208 (256)
.+.+.
T Consensus 169 ~i~~~ 173 (448)
T PRK09848 169 SIKNS 173 (448)
T ss_pred HHHHh
Confidence 66554
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.25 E-value=4.1e-10 Score=95.03 Aligned_cols=159 Identities=16% Similarity=0.169 Sum_probs=112.8
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC-chhHHHHHHHHHHHHHHHHHh
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-YSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~l~~~~~~~~~~~~~~~~ 145 (256)
...++..+......|.++.++ ++.|.+..++|.+.++..+..+++++++|.++||++ +|+++.+..++.++..+....
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L-~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYL-ESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666778888886 557899999999999999999999999999999986 567777777777777777777
Q ss_pred hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhH-HhhhhhccC---chHHHHH
Q psy11010 146 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF-GGIMYQFVG---KTAPFLI 221 (256)
Q Consensus 146 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i-~~~l~~~~g---~~~~~~~ 221 (256)
.++++.+++..++..+......|...++..+... +++.-.|-.....++|-+++... .+.+....+ ....+++
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~---~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG---DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc---cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 8888888888888888888888888888888874 33344455555555665555433 223333222 2344555
Q ss_pred HHHHHHHH
Q psy11010 222 LSALALGD 229 (256)
Q Consensus 222 ~~~~~~~~ 229 (256)
.+...++.
T Consensus 165 ~~~~~~ll 172 (400)
T PF03825_consen 165 AAILSLLL 172 (400)
T ss_pred HHHHHHHH
Confidence 55544443
No 204
>KOG2532|consensus
Probab=99.25 E-value=1e-10 Score=100.13 Aligned_cols=178 Identities=17% Similarity=0.080 Sum_probs=129.6
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCch--------hHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS--------LPM 129 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--------~~l 129 (256)
+...++.+.++.+........+....|.|+.+.+|.+..+.|++.++..+.+.+..+++|+++||.-+| |.+
T Consensus 256 ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 256 TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 345678888888888888888888999999999999999999999999999999999999999987552 222
Q ss_pred -HHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhhhhchhhhh-hhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 130 -FTGFVIMFLSTLIFAFGRT-YGVLFLARSLQGIGSSCSSVSG-MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~-~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
.++....++..+..++.++ .....+..+..+.+..+..... ..-..+.. + ++-+..+|+.+....+..+++|.+.
T Consensus 336 n~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-p-q~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-P-QHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-c-hHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 4455566666666666552 1111111222222222222222 22222324 3 8999999999999999999999999
Q ss_pred hhhhhc---cCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 207 GIMYQF---VGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 207 ~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
+.+... ..|+++|++.+++.++..++..++-
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 999842 3699999999999998776655553
No 205
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.24 E-value=8.6e-10 Score=93.22 Aligned_cols=134 Identities=13% Similarity=-0.002 Sum_probs=100.1
Q ss_pred hhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHH-HHHHHHHHHHHHh--hchHHHHHHHHH
Q psy11010 81 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG-FVIMFLSTLIFAF--GRTYGVLFLARS 157 (256)
Q Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~ 157 (256)
...+.++++.+|.++.+.+++.....++..++..+.+++.||++++...... .++..+....... ..+.+.+....+
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAA 307 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 3445566666899999999999999999999999999999999843332222 2222222222222 235566777788
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
+.|++.+...+...++..|.+| ++++.+.++.+....+|..+++.+++.+.+...+.
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 308 LFFFGAGMLFPLATSGAMEPFP--YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc--ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 9999999999999999999886 67899999999999999999999999887654333
No 206
>KOG3764|consensus
Probab=99.23 E-value=4.8e-11 Score=97.26 Aligned_cols=173 Identities=20% Similarity=0.192 Sum_probs=137.4
Q ss_pred HHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC--chhHHHHHHHHHHHHHH
Q psy11010 64 IVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG--YSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~l~~~~~~~~~~~~ 141 (256)
.........+.......|.++.++.|.+..+..+.|...--..+.+.++..+.|.++||++ |-.....++++..+...
T Consensus 274 ~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 274 LIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhc
Confidence 3333444456677777888899888998866779999999999999999999999999999 43333455566666666
Q ss_pred HHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc--c---hhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCch
Q psy11010 142 IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD--R---ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 216 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~---~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~ 216 (256)
...+++++.++++-++..+++.+................. + ..|...++...++.+|..+||.++|.+.+..|++
T Consensus 354 ~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~ 433 (464)
T KOG3764|consen 354 PIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFE 433 (464)
T ss_pred hhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHH
Confidence 7778999999999888888888887777666666665431 2 4478889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhhhe
Q psy11010 217 APFLILSALALGDGCKCNYT 236 (256)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~ 236 (256)
|...+.++..++..-+..+.
T Consensus 434 wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 434 WLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999988876655443
No 207
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.22 E-value=6.8e-10 Score=98.72 Aligned_cols=157 Identities=12% Similarity=0.097 Sum_probs=129.4
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHHHHHHHHHHHhhch--------H
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRT--------Y 149 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~~~~~~~~~~~~~~--------~ 149 (256)
+...+..|+.+.+|.+.+.+..+...+....-+...++|+++|+ +|+++.+..+.++..++.++.++... .
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 34455667778899999999999999999999999999999995 69999999999999999888776421 2
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCc--chhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc-------CchHHHH
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFL 220 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~-------g~~~~~~ 220 (256)
...+++..+..+|.|++-+...+...|.++++ ++|.+.+.++..+.++|+++++.+..++.+.. +|...|.
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 33667788899999999999999999999751 24678888999999999999999999887443 6999999
Q ss_pred HHHHHHHHHHhHhhh
Q psy11010 221 ILSALALGDGCKCNY 235 (256)
Q Consensus 221 ~~~~~~~~~~~~~~~ 235 (256)
+.++..+++.++...
T Consensus 166 i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 166 VPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888887666544
No 208
>KOG2563|consensus
Probab=99.22 E-value=6.2e-10 Score=92.30 Aligned_cols=184 Identities=14% Similarity=0.092 Sum_probs=131.7
Q ss_pred cccccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHH
Q psy11010 53 KSRESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG 132 (256)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~ 132 (256)
+..++||..++...+..+.+.+....+.++ ..+....+| +....-|...++++.++...+.+-|+.||+|-|..++++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i-~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPI-NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhH-HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 455777877777777777665555555444 334466677 777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc------hHH--HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhh
Q psy11010 133 FVIMFLSTLIFAFGR------TYG--VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 204 (256)
Q Consensus 133 ~~~~~~~~~~~~~~~------~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~ 204 (256)
.....+|..+-..+. .++ ....++.+.+..+-.....-.-+..-||++ ++|..+..+-.++..+|..+|.+
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~-~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPP-DQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCc-chhhhhhhHHHhcchHHHHHHhh
Confidence 999999998776542 233 556777888777766666555667779998 99999998877777777777777
Q ss_pred HHhhhhhcc------CchH--HHHHHHHHHHHHHhHhhheeec
Q psy11010 205 FGGIMYQFV------GKTA--PFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 205 i~~~l~~~~------g~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+...+..+. .|.. .|+...+++.+.+++..+..++
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 766665443 3443 3444444444444444343333
No 209
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.17 E-value=3.3e-10 Score=94.59 Aligned_cols=119 Identities=15% Similarity=0.168 Sum_probs=92.3
Q ss_pred hchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh--hc--hHHHHH
Q psy11010 78 TVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF--GR--TYGVLF 153 (256)
Q Consensus 78 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~--~~--~~~~~~ 153 (256)
......+.+.++.+|.++.+.+++.++..+...++.++.|+++||+|+|+.+..+......+..+..+ .. +.+..+
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 34456677877888999999999999999999999999999999999998887777666666555443 22 555555
Q ss_pred HHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHH
Q psy11010 154 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG 198 (256)
Q Consensus 154 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg 198 (256)
+...+.+++.|...+...+++.+..| +++|++.|+.+....+|
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 323 VLFVALFFFSGAGNGSTFALVPHIFR--RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhccccchhhhcchhhch--hhcccHHHHHHHhccCC
Confidence 55566666666666777788888885 79999999998877665
No 210
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.2e-09 Score=92.40 Aligned_cols=154 Identities=14% Similarity=0.119 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
+...++..++..........+...|.+.-+|.++....+.......+..++.+++.++.+|+|+|+++.++.++.+++.+
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 33333344444455555556666666666777777777888888888888899999999999999999999999999998
Q ss_pred HHHhhc--hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC------cchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 142 IFAFGR--TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD------DRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 142 ~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~------~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+..+.+ +.+.+++..++.++|.+...+...++++|..+- ++.-|...+......-+|..++..+.|++.+..
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 887755 677888888999999999999999999987632 134477788888899999999999999888765
Q ss_pred Cc
Q psy11010 214 GK 215 (256)
Q Consensus 214 g~ 215 (256)
|+
T Consensus 398 Gy 399 (467)
T COG2211 398 GY 399 (467)
T ss_pred CC
Confidence 53
No 211
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.16 E-value=2.1e-09 Score=93.69 Aligned_cols=137 Identities=20% Similarity=0.183 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHhhhHH----HHhhhhcCchhHHHHHHHHHHHHHHHHHhhch---------HHHHHHHHHHHHhhhh
Q psy11010 98 VGVMFGSKAFVQLLANPLV----GILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT---------YGVLFLARSLQGIGSS 164 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~----g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~G~~~g 164 (256)
.+++.++..+...+..++. +++.+|++..+.+.+|.++.+++.+..+...+ .+++....++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777777666776666 66677777778889999999999888776544 4578889999999999
Q ss_pred chhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh----------hccCchHHHHHHHHHHHHHHhHhh
Q psy11010 165 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY----------QFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~----------~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
...|...+++.+..|+ +.||+++|++.....+|..++..+.+... ...++.+.|...++++++..++.+
T Consensus 398 ~~~p~g~s~~~~~aP~-~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 398 MISGLGLAMVAQLVPQ-RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred HHhHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 99999999998887777777666654221 112367788777777665554444
Q ss_pred h
Q psy11010 235 Y 235 (256)
Q Consensus 235 ~ 235 (256)
.
T Consensus 477 ~ 477 (500)
T PRK09584 477 L 477 (500)
T ss_pred H
Confidence 4
No 212
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.16 E-value=1.4e-13 Score=118.39 Aligned_cols=156 Identities=17% Similarity=0.114 Sum_probs=106.7
Q ss_pred HHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH--h---hch----HHHHHHHHH
Q psy11010 87 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA--F---GRT----YGVLFLARS 157 (256)
Q Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~~ 157 (256)
+.+..+.+.. -.......+...++.+....+.||+|||++++.+.++.++..+..+ . .++ -...++...
T Consensus 279 i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 356 (451)
T PF00083_consen 279 IFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLA 356 (451)
T ss_pred cccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeee
Confidence 3455666655 2233344455556666777999999999999999888888777664 1 111 111222222
Q ss_pred HHHhhhh-chhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 158 LQGIGSS-CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 158 l~G~~~g-~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
+...+.+ ...+....+.+|.+|. +.|+++.++......++.++++.+...+.+..+-...+.+.++++++..+..+++
T Consensus 357 l~~~~~~~g~~~~~~~~~~ElfPt-~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 357 LFFAFFSLGWGPLPWIYTAELFPT-KVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred eccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 2222222 3445566889999999 9999999999998899999999998888877664556777777777777777788
Q ss_pred eecCCCCcc
Q psy11010 237 IVQKSSSHD 245 (256)
Q Consensus 237 ~~~~~~~~~ 245 (256)
.||++.+..
T Consensus 436 lpET~g~~l 444 (451)
T PF00083_consen 436 LPETKGKTL 444 (451)
T ss_pred EeeCCCCCH
Confidence 888765543
No 213
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.15 E-value=3.3e-09 Score=89.73 Aligned_cols=184 Identities=13% Similarity=0.105 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh----cCc-hhHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGY-SLPMFTGF 133 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~-r~~l~~~~ 133 (256)
.+.-....+..+..+.........+..+.++..|+++..+|.+..+.-+--++.-|+.|.+.|| +|| |+.++++.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 3344455555555666666666677778899999999999999999999999999999999995 675 56667777
Q ss_pred HHHHHHHHHHHhhc------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHh
Q psy11010 134 VIMFLSTLIFAFGR------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 207 (256)
Q Consensus 134 ~~~~~~~~~~~~~~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~ 207 (256)
+-.++...++..++ +....++...+.+++......+..++.+|+.++.++|.+..+..+.+..+|..+...+..
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~ 170 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP 170 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776655 344566677889999999999999999999876689999999999998888777666665
Q ss_pred hhhh-------ccCchHHHHHHHHHHHHHHhHhhheeecCCC
Q psy11010 208 IMYQ-------FVGKTAPFLILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 208 ~l~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.+.. ..||+....+.+++.++..+..++..+|+..
T Consensus 171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 5443 2468888888888888877777776666554
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.10 E-value=9e-09 Score=84.99 Aligned_cols=159 Identities=14% Similarity=0.099 Sum_probs=131.3
Q ss_pred HhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh-hcCchhHHHHHHHHHHHHHHHHHh---hchHH
Q psy11010 75 LLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-RVGYSLPMFTGFVIMFLSTLIFAF---GRTYG 150 (256)
Q Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~l~~~~~~~~~~~~~~~~---~~~~~ 150 (256)
.+++.-.++.+|-.+-+|++..+...+......+..++....|++.. |.++++.-.+++...+++..+..+ ..+.+
T Consensus 223 a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~ 302 (403)
T PF03209_consen 223 AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPW 302 (403)
T ss_pred HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 33344456777788889999999999999999999999999998877 677888888888888877765544 45778
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc----------cCchHHHH
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF----------VGKTAPFL 220 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~----------~g~~~~~~ 220 (256)
.+....++.|++.|.......+.+.+...+ ++.|..+|.++....+...++-.++|.+.|. .+|..+|.
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~-~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~ 381 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSA-GRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFA 381 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 888999999999999999999999999998 8999999999999999999999999987653 24677777
Q ss_pred HHHHHHHHHHhHhh
Q psy11010 221 ILSALALGDGCKCN 234 (256)
Q Consensus 221 ~~~~~~~~~~~~~~ 234 (256)
+.++..+++..+..
T Consensus 382 lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 382 LEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666555443
No 215
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.09 E-value=5.6e-09 Score=90.69 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhhcCchhH-------HHHHHHHHHHHHHHHH-----hh-----chHHHHHHHHHHHH
Q psy11010 98 VGVMFGSKAFVQLLANPLVGILTHRVGYSLP-------MFTGFVIMFLSTLIFA-----FG-----RTYGVLFLARSLQG 160 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~l~G 160 (256)
.+++.++..+...+..|+.+++.||+++|+. +.+|.++.+++.+..+ +. .+.+++....++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4566667777888899999999999998873 6777777777764321 21 35677778889999
Q ss_pred hhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh----------ccCchHHHHHHHHHHHHHH
Q psy11010 161 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ----------FVGKTAPFLILSALALGDG 230 (256)
Q Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~----------~~g~~~~~~~~~~~~~~~~ 230 (256)
+|.+...+...+++.+..|+ +.++.++|+++....+|..+|..++..... ...+.+.|...++.+++..
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~-~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 469 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQ-HLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVA 469 (489)
T ss_pred HHHHHHhHHHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 999999999999999999999888765521 1125677777777777666
Q ss_pred hHhhheee
Q psy11010 231 CKCNYTIV 238 (256)
Q Consensus 231 ~~~~~~~~ 238 (256)
++.+...|
T Consensus 470 v~~~~~~~ 477 (489)
T PRK10207 470 VVMALMVP 477 (489)
T ss_pred HHHHHHHH
Confidence 65555443
No 216
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.08 E-value=1.6e-09 Score=93.62 Aligned_cols=126 Identities=13% Similarity=0.070 Sum_probs=110.1
Q ss_pred HhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh----------hchHHHHHHHHH
Q psy11010 88 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF----------GRTYGVLFLARS 157 (256)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 157 (256)
.+.+|.++...|.+.....++.+++....+++.+|++.|+++.++.++.+++.+.... .++.+.+....+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 4568999999999999999999999999999999999999999999988887755431 133334455678
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 214 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g 214 (256)
+.+++.+..+.+...++++..|+ +++|+..++.++..++|..+++.+++.+.++.|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~-~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPS-GCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCC-CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88999999999999999999998 999999999999999999999999999998876
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.08 E-value=7.4e-09 Score=84.95 Aligned_cols=166 Identities=15% Similarity=0.031 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+....++.|+.-........+++.++.+..|.++.+.+...+.+..+.++++.+..++..|+...|.+....++..+-+
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 34444444444444555556777888777789999999999999999999999999999999999999999888888888
Q ss_pred HHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHH
Q psy11010 141 LIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFL 220 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~ 220 (256)
+...+.++... +.+.++.|+..++.+|...++..+..|. +-.. .|..-.+..+|+.+-|.+.|++.|+.|-...+.
T Consensus 317 ~~~~l~~g~v~-~~~l~~ig~F~simfPTIfslal~~l~~--~ts~-~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 317 LAVALIGGVVA-LYALFLIGLFNSIMFPTIFSLALKNLGE--HTSV-GSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHHHHhccCc--cccc-cceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 88888888544 4556789999999999999999999974 3322 333334555788899999999999999888777
Q ss_pred HHHHHHHHHH
Q psy11010 221 ILSALALGDG 230 (256)
Q Consensus 221 ~~~~~~~~~~ 230 (256)
....+|.+..
T Consensus 393 ~~pllc~lyV 402 (422)
T COG0738 393 IVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHH
Confidence 5555555543
No 218
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.07 E-value=2.3e-08 Score=85.20 Aligned_cols=165 Identities=12% Similarity=0.004 Sum_probs=107.0
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
..+..++............|.++++.+|.++.+.++.......+..++..+.+++.++..+++.+.....+..++.++..
T Consensus 223 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~ 302 (413)
T PRK15403 223 GAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLI 302 (413)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Confidence 33333333334444445567777788899999999998888888888888888876554444433322233333332222
Q ss_pred -----hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHH
Q psy11010 145 -----FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPF 219 (256)
Q Consensus 145 -----~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~ 219 (256)
..+++...++..++.++|.+...+......-... + ..+|++.++.+.....+..+++.+++++.++ +-.+.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~-~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 379 (413)
T PRK15403 303 VGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-N-LPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPF 379 (413)
T ss_pred HHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHH
Confidence 1233434567788889999988887765332222 2 4679999999998888899999999988776 556667
Q ss_pred HHHHHHHHHHHhH
Q psy11010 220 LILSALALGDGCK 232 (256)
Q Consensus 220 ~~~~~~~~~~~~~ 232 (256)
...+++..+....
T Consensus 380 ~~~~~~~~~~~~~ 392 (413)
T PRK15403 380 HLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHHH
Confidence 6666555544333
No 219
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.06 E-value=2.2e-08 Score=80.62 Aligned_cols=154 Identities=25% Similarity=0.380 Sum_probs=117.6
Q ss_pred hHhhhchhhhHHHHHhhhcCcc--hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhch--H
Q psy11010 74 MLLTTVEDVARENRHKYLMGET--KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT--Y 149 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~--~ 149 (256)
..........+.+ ..+.+.+. ...++..+...++..++.++.|++.||+|||+.+..+.....++.++..+..+ .
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 16 LDLGLLSPALPLL-LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HhcchHHHHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 3333333444444 34444444 47899999999999999999999999999998888887765666666666655 8
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHH-HHHHHHhhhhhHHhhhhhc--cCchHHHHHHHHHH
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPPFGGIMYQF--VGKTAPFLILSALA 226 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~-~~~lg~~~g~~i~~~l~~~--~g~~~~~~~~~~~~ 226 (256)
+.+.+.|++.|++.+...+...+++.|.+|+.++|+...+.... ...+|..++|.+++.+... .+|+..|.......
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 88889999999999999999999999999720278888888877 6888889998887776654 57888776666655
Q ss_pred HH
Q psy11010 227 LG 228 (256)
Q Consensus 227 ~~ 228 (256)
..
T Consensus 175 ~~ 176 (338)
T COG0477 175 LL 176 (338)
T ss_pred HH
Confidence 44
No 220
>KOG2816|consensus
Probab=99.06 E-value=1.1e-08 Score=87.58 Aligned_cols=133 Identities=25% Similarity=0.436 Sum_probs=111.6
Q ss_pred HHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhh--hhchhhhhhhhhhhcccCcch
Q psy11010 106 AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG--SSCSSVSGMGMLAERYPDDRE 183 (256)
Q Consensus 106 ~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~--~g~~~~~~~~~~~~~~~~~~~ 183 (256)
.+...+.++..|.++||+|||..+........+..+...+.. +++++ +.++. .+..+....++++|.... ++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~-~~ 145 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSE-EE 145 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccch-hH
Confidence 677888999999999999999999999988888888777765 33333 44433 334566678999999997 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCCCCc
Q psy11010 184 RGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSSSH 244 (256)
Q Consensus 184 r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (256)
|....|+.+.....+..++|.+++.+.+..|.-..|.+..+..++..+...+..||+..++
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 9999999999999999999999999999999999999999999998888888887755443
No 221
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.97 E-value=7.4e-08 Score=82.81 Aligned_cols=183 Identities=11% Similarity=0.026 Sum_probs=137.5
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhh-hcCcch----------hHHHHHHHHHHHHHHhhhHHHHhhhhcCc-h
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKY-LMGETK----------AVGVMFGSKAFVQLLANPLVGILTHRVGY-S 126 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~----------~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r 126 (256)
.+.+..+++..++..++...+......++.++ ++-++. .-.+....+.+...+.+++..++.+|+|+ |
T Consensus 257 P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k 336 (477)
T TIGR01301 257 PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK 336 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 34566777777777777777666666666543 332211 12344555666666777888899999995 7
Q ss_pred hHHHHHHHHHHHHHHHHHhhch---------------------HHHHHHHHHHHHhhhhchhhhhhhhhhhcccC-cchh
Q psy11010 127 LPMFTGFVIMFLSTLIFAFGRT---------------------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD-DRER 184 (256)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~r 184 (256)
.+...+.++.+++.+...+.++ .+..++...+.|+..+..+..-++++++..++ +++.
T Consensus 337 ~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~ 416 (477)
T TIGR01301 337 RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQ 416 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCC
Confidence 7779998888888877765442 25667778889999999999999999999985 1455
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHhhhhhccC--chHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 185 GNAMGIALGGLALGVLIGPPFGGIMYQFVG--KTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 185 ~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
|..+|+.|.+..+..++..+..|.+.+..| -.+++.+.++..+++.+..++.+|+.+
T Consensus 417 G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 417 GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999988888665544 667888899999998888888877654
No 222
>PRK11462 putative transporter; Provisional
Probab=98.96 E-value=6.8e-08 Score=83.43 Aligned_cols=121 Identities=16% Similarity=0.123 Sum_probs=83.8
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhhhhchhhhhhh
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSSVSGMG 172 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~ 172 (256)
+...+.+...+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++..++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456777888888999999999999999999987765554444333333322 2333445556678877777766677
Q ss_pred hhhhcccC------cchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 173 MLAERYPD------DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 173 ~~~~~~~~------~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
+++|..+- ++..|...+.......+|..+++.++|++.+..|+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77776541 03335556777788999999999999988876554
No 223
>KOG3626|consensus
Probab=98.96 E-value=6.5e-09 Score=91.82 Aligned_cols=179 Identities=21% Similarity=0.242 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+.++++..+..++....+...+.. +++.++++.++.|++.+.+-++..+...+..+..-|..|-+.+-+|.++++++.
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~Itt-iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITT-IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 3455556666666666444444444 588899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--------------------c---------------------------h----HH-HHHHHHHHHHhhhhchhh
Q psy11010 141 LIFAFG--------------------R---------------------------T----YG-VLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 141 ~~~~~~--------------------~---------------------------~----~~-~~~~~~~l~G~~~g~~~~ 168 (256)
+++++- + + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988751 0 0 22 567789999999999999
Q ss_pred hhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc------------------cC-chHHHHHHHHHHHHH
Q psy11010 169 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------------------VG-KTAPFLILSALALGD 229 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~------------------~g-~~~~~~~~~~~~~~~ 229 (256)
...+|+-|...+ ++-...+|+......+|-++|-++++++... .| |..-|++.+.+.++.
T Consensus 257 lGisYiDDnvk~-~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 257 LGISYIDDNVKK-KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred CCCccccccccc-cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999997 8999999999999999999999999887642 12 777888899998888
Q ss_pred HhHhhheeecCC
Q psy11010 230 GCKCNYTIVQKS 241 (256)
Q Consensus 230 ~~~~~~~~~~~~ 241 (256)
.+..+++.++.+
T Consensus 336 a~p~f~fPk~lp 347 (735)
T KOG3626|consen 336 AVPLFFFPKELP 347 (735)
T ss_pred HHHHHhCcccCc
Confidence 887777655444
No 224
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.91 E-value=1.7e-10 Score=100.59 Aligned_cols=173 Identities=18% Similarity=0.202 Sum_probs=3.0
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~ 144 (256)
+++..+.+ .....+......-+++.++++.++.|++.+.+-++..+..++..++.+|..|-+.+-.|.++++++.++++
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33334444 33333333333345899999999999999999999999999999999998888889999999999998876
Q ss_pred hh------------c--------------------------------------hHHHHHHHHHHHHhhhhchhhhhhhhh
Q psy11010 145 FG------------R--------------------------------------TYGVLFLARSLQGIGSSCSSVSGMGML 174 (256)
Q Consensus 145 ~~------------~--------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~ 174 (256)
+- . -+..+++++++.|+|....++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 40 0 024477789999999999999999999
Q ss_pred hhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc---------------------cC-chHHHHHHHHHHHHHHhH
Q psy11010 175 AERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF---------------------VG-KTAPFLILSALALGDGCK 232 (256)
Q Consensus 175 ~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~ 232 (256)
-|..++ ++-+..+|++.....+|..+|-.+++.+... .| |...|++.+++.++..+.
T Consensus 167 DDnv~~-~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 167 DDNVSK-KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc-ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 9999999999999999999999998876532 13 777788888888887777
Q ss_pred hhheeec
Q psy11010 233 CNYTIVQ 239 (256)
Q Consensus 233 ~~~~~~~ 239 (256)
.+++.++
T Consensus 246 l~~FPk~ 252 (539)
T PF03137_consen 246 LFFFPKK 252 (539)
T ss_dssp -------
T ss_pred HHcCCcc
Confidence 6665543
No 225
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.89 E-value=1.5e-07 Score=77.80 Aligned_cols=127 Identities=19% Similarity=0.167 Sum_probs=101.1
Q ss_pred HHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC-----chhHHHHH-HHHHHHHHHHHHh-----hc--------
Q psy11010 87 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTG-FVIMFLSTLIFAF-----GR-------- 147 (256)
Q Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~l~~~-~~~~~~~~~~~~~-----~~-------- 147 (256)
+..|++++..-.+.+.++..+... .++.+|+.+|+.+ ||..+++. .++...+..+..+ +.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998888765 6999999999998 88777654 4555554444443 12
Q ss_pred h-HH--HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 148 T-YG--VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 148 ~-~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
. .+ ...+...+.|+|.+...+...+++.|..|+ ++|+++.++...+.-+|.+++..+.+.+.+.+..
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e-~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE-ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH-hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 1 12 233456679999999999999999999998 9999999999999999999999999998887653
No 226
>KOG0254|consensus
Probab=98.87 E-value=1.7e-07 Score=82.18 Aligned_cols=183 Identities=12% Similarity=0.012 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
.+.+..+.+..+....+...+....+.. -+..|.+... .+...+..+...++..+...+.||+|||+.++.+.+.+.+
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 3344444555555545555555555555 4555655433 5666667777777788889999999999999999999999
Q ss_pred HHHHHHhhchH-------------HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhH
Q psy11010 139 STLIFAFGRTY-------------GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 205 (256)
Q Consensus 139 ~~~~~~~~~~~-------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i 205 (256)
+.++++..... ..+....+..........+....+.+|.+|. +.|+++.++......+...+-...
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~-~~r~~~~s~~~~~n~~~~~~v~~~ 450 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL-RLRSKGASLAVAVNWLWNFLISFF 450 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH-hHHhhhHHHHHHHHHHHHHHHHHH
Confidence 98877653111 1111122222222333445556788999998 999999999776666655554333
Q ss_pred HhhhhhccCchHHHHHHHHHHHHHHh-HhhheeecCCCCc
Q psy11010 206 GGIMYQFVGKTAPFLILSALALGDGC-KCNYTIVQKSSSH 244 (256)
Q Consensus 206 ~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 244 (256)
.-.+.+..++...|...+..+.+..+ ..+++.||.+...
T Consensus 451 ~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 451 FPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred HHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 33444443345667777777777666 6677777766543
No 227
>KOG4686|consensus
Probab=98.84 E-value=3.7e-10 Score=88.38 Aligned_cols=155 Identities=17% Similarity=0.219 Sum_probs=122.3
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVI 135 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~ 135 (256)
+|...++.+|+..+...+++-.-. .+..+...+.++..++..++.+++..-+++.+.++|++.|| +|-|..-++-++.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~-alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPG-ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCch-hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 344455555555555555544332 23444467778888899999999999999999999999996 6777766666666
Q ss_pred HHHHHHHHH---hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 136 MFLSTLIFA---FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 136 ~~~~~~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
..++-++++ ..+.+|.+.++|++.|+|.-....+-+.++..||.. |+.+.++|+......+|..+--.+.+++++.
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKG-KELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKG-KELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecC-ccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 667766664 468899999999999999887878889999999997 9999999999999999999988888888875
Q ss_pred c
Q psy11010 213 V 213 (256)
Q Consensus 213 ~ 213 (256)
.
T Consensus 199 ~ 199 (459)
T KOG4686|consen 199 M 199 (459)
T ss_pred H
Confidence 3
No 228
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.82 E-value=1.3e-07 Score=80.98 Aligned_cols=155 Identities=19% Similarity=0.237 Sum_probs=120.7
Q ss_pred HHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc---C--chhHHHHHHHHHHHHHHHHHhh----chHHHHHH
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV---G--YSLPMFTGFVIMFLSTLIFAFG----RTYGVLFL 154 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---G--~r~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 154 (256)
.+++.+++|.++++...+.++..+... ..++.|.++|.+ | ||+-++++.++..++.+.++.. .+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 445689999999999998888888775 588899999976 2 4555566666665555545442 35566667
Q ss_pred HHHHHHhhhhchhhhhhhhhhhcccCc-chhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHh
Q psy11010 155 ARSLQGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKC 233 (256)
Q Consensus 155 ~~~l~G~~~g~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 233 (256)
..++..+|.........+++.|....+ +.||...+.......+|.+++..+.|.+.+..+++..|.+.+.+.++..+..
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~ 171 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVA 171 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHH
Confidence 778888999999999999999987431 3477888888889999999999999999999999999999888887776666
Q ss_pred hheeec
Q psy11010 234 NYTIVQ 239 (256)
Q Consensus 234 ~~~~~~ 239 (256)
++..+|
T Consensus 172 ~~~~~e 177 (433)
T PF03092_consen 172 LFLLEE 177 (433)
T ss_pred HHhhhh
Confidence 665554
No 229
>KOG0252|consensus
Probab=98.81 E-value=1.4e-08 Score=84.50 Aligned_cols=181 Identities=16% Similarity=0.022 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHH--------HHHHHH-HHHHHhhhHHHHhhhhcCchhHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGV--------MFGSKA-FVQLLANPLVGILTHRVGYSLPMF 130 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~G~r~~l~ 130 (256)
..++..+...|+.-...+...-.... +-+..|..+..... ...+.. .++..+-.+...++|++|||+..+
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~-I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~ 382 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSV-IFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQL 382 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHH-HHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHH
Confidence 45555666666544444444333333 33545555543333 111111 122234555677899999999999
Q ss_pred HHHHHHHHHHHHHHhhch----HHHHHHHHHH-HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhH
Q psy11010 131 TGFVIMFLSTLIFAFGRT----YGVLFLARSL-QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 205 (256)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i 205 (256)
-|++++.+..+..+..-| ...+++...+ +=++.-+-......+.+|.+|. +.|+++-|+.....-.|+++|...
T Consensus 383 ~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa-rvR~t~hGIsAA~GK~GAivg~~~ 461 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA-RVRSTCHGISAASGKAGAIVGAFG 461 (538)
T ss_pred hhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchH-HHhhhhhhHHHHhccchHHHHHHH
Confidence 999999999888877544 1122222222 2222333445556788999999 999999999999999999999999
Q ss_pred Hhhhhh-----ccCchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 206 GGIMYQ-----FVGKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 206 ~~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
..++.+ ..+.++++++.+...++..+..+ +.||++.+
T Consensus 462 F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~ 503 (538)
T KOG0252|consen 462 FLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKGK 503 (538)
T ss_pred hhHhhhccCCccccchHHHHHHHHHHHHhHheeE-Eeeccccc
Confidence 999998 67899999999999988655554 45555443
No 230
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.77 E-value=1.7e-06 Score=74.73 Aligned_cols=145 Identities=15% Similarity=0.121 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHH-HHHHHHHHHHHhh-c-hHHHHHHHHHHHHhhhhchhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGF-VIMFLSTLIFAFG-R-TYGVLFLARSLQGIGSSCSSVSGMGM 173 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~ 173 (256)
..++..++..+..++..|+.|.++|+-++||.++... ++..+...++.+. + +++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999776665544 4444555555553 3 34444444555667778888888999
Q ss_pred hhhcccCcchh--------------------------hHHHHHHHHHHHHHHhhhhhHHhhhhhc--------cCchHHH
Q psy11010 174 LAERYPDDRER--------------------------GNAMGIALGGLALGVLIGPPFGGIMYQF--------VGKTAPF 219 (256)
Q Consensus 174 ~~~~~~~~~~r--------------------------~~~~g~~~~~~~lg~~~g~~i~~~l~~~--------~g~~~~~ 219 (256)
+.|..++ +.+ ++..+.-....++|+++.-.+.-.+... .+.|..+
T Consensus 151 LP~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 151 LPDLARP-EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred hHhhcCC-ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 9999997 777 8888888888888888776665544321 2358888
Q ss_pred HHHHHHHHHHHhHhhheeecCCC
Q psy11010 220 LILSALALGDGCKCNYTIVQKSS 242 (256)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~ 242 (256)
.+.++..++..+..++..|++++
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 99998888878887877777655
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.72 E-value=1e-06 Score=77.34 Aligned_cols=148 Identities=15% Similarity=0.136 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcc---hhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-hhHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGET---KAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVI 135 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~~~~~ 135 (256)
+.+...+++.++.++.+.....+.|.....-++.++ ...++......++..+++.+.|.+..+++| |+.++++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 456666666666666666655666665555555544 257888888999999999999999988876 4455577666
Q ss_pred HHHHHHHHHh--hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 136 MFLSTLIFAF--GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 136 ~~~~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
+.++.-+++. .+|....+...++.|++.|.........+.-..|+ ++-+.+.|+..+...+|+.+|..+...
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~-~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPD-EDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCc-hHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6655444433 34555666778899999999888877777778887 999999999999999998888877643
No 232
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.71 E-value=2.8e-06 Score=71.08 Aligned_cols=161 Identities=12% Similarity=0.060 Sum_probs=126.5
Q ss_pred hHhhhchhhhHHHHHhh-hcCcchhHH-HHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHH
Q psy11010 74 MLLTTVEDVARENRHKY-LMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGV 151 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~ 151 (256)
-..--..|++.+|+.+. .|++..++. -+.-...-.+....++...+.|..+.|++++.+.+...+...++.+.++...
T Consensus 17 ~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~ 96 (412)
T PF01770_consen 17 KEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLA 96 (412)
T ss_pred HhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHH
Confidence 34445567777777665 788877754 5566666777888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc--cCchHHHHHHHHHHHHH
Q psy11010 152 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGD 229 (256)
Q Consensus 152 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~--~g~~~~~~~~~~~~~~~ 229 (256)
+-+..++.|++.+. ..+..+++-...++ ++--++.+....+.-+|..++..++-.+... .+++....+......++
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~-~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a 174 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDK-EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA 174 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 99999999998776 55568899999987 8888999998888888888888888777653 34666666655555554
Q ss_pred HhHhhhe
Q psy11010 230 GCKCNYT 236 (256)
Q Consensus 230 ~~~~~~~ 236 (256)
.+..+++
T Consensus 175 ~~~~~fL 181 (412)
T PF01770_consen 175 LLIALFL 181 (412)
T ss_pred HHHHHHc
Confidence 5554443
No 233
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.65 E-value=2.3e-07 Score=75.97 Aligned_cols=90 Identities=17% Similarity=0.179 Sum_probs=77.1
Q ss_pred hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc------------
Q psy11010 145 FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------------ 212 (256)
Q Consensus 145 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~------------ 212 (256)
..++++.++++.++.|.|.+...+..++++++..++ +++.+.+++.+.++++|..++|.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~-~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPI-ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc-chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 457899999999999999999999999999999998 8999999999999999999999999987732
Q ss_pred ----cCchHHHHHHHHHHHHHHhHhhh
Q psy11010 213 ----VGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 213 ----~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
.+|+++|++.+.+.++..++..+
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36999999777665555544433
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.62 E-value=4.9e-06 Score=60.58 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
-.-.++......+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-.+.|++.+..+.....++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 344555666677788888899999999999999999888655544 4556778899999999999999999999999999
Q ss_pred cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh
Q psy11010 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMY 210 (256)
Q Consensus 179 ~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~ 210 (256)
.+ +.+++..+++-.....+.++|.++.-.+.
T Consensus 119 ~~-~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TE-ETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CH-HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 99999999988877788888877765554
No 235
>KOG2615|consensus
Probab=98.62 E-value=5.9e-07 Score=73.43 Aligned_cols=145 Identities=17% Similarity=0.256 Sum_probs=119.7
Q ss_pred HHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC--chhHHHHHHHHHHHHHHHHH
Q psy11010 67 IALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG--YSLPMFTGFVIMFLSTLIFA 144 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~l~~~~~~~~~~~~~~~ 144 (256)
+-.++....+..+......+..+.+|.++.+.|-+.+...+.+.+.+....+..||.. -+-.+..++.++.-..++.+
T Consensus 268 l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls 347 (451)
T KOG2615|consen 268 LHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS 347 (451)
T ss_pred HHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh
Confidence 3333333333333333344445679999999999999999999999999999999987 67777777777777777888
Q ss_pred hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 145 FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 145 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
.+.....+..+..+-.+..+...+....++....|. ++||..+|+......++.++||.++|.+..+
T Consensus 348 ~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~-~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 348 LARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQ-SQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred ccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCc-ccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 888888889999999999999999999999999998 9999999999999999999999999887654
No 236
>KOG0637|consensus
Probab=98.61 E-value=1.7e-07 Score=78.13 Aligned_cols=148 Identities=17% Similarity=0.174 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh----hcCchhHHH-HHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLPMF-TGFV 134 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~l~-~~~~ 134 (256)
+.+.......+...++...-..+.++|+ +++|++..+.+.+.....+...+.+|+.|..+| |||||+.++ .+..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl-~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYL-QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHH-HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 4445555555555666666667778875 679999999999999999999999999999999 588776665 4566
Q ss_pred HHHHHHHHHHhhchH-----------------HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhH-HHHHHHHHHH
Q psy11010 135 IMFLSTLIFAFGRTY-----------------GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGN-AMGIALGGLA 196 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~-----------------~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~-~~g~~~~~~~ 196 (256)
...++.++..++.++ ..++++.-+.=++......+.-+++.|.... +++.+ +++.+..+.+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~-d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARG-DAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccC-hhhhhccchhHHHHHH
Confidence 677777777765432 2234444455566667888889999999987 55555 9999999999
Q ss_pred HHHhhhhhHHhhh
Q psy11010 197 LGVLIGPPFGGIM 209 (256)
Q Consensus 197 lg~~~g~~i~~~l 209 (256)
+|+.+|..+++++
T Consensus 190 vGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 190 VGNVLGYALGSYL 202 (498)
T ss_pred hcceeeeeccccc
Confidence 9999998888743
No 237
>KOG2533|consensus
Probab=98.61 E-value=1.8e-07 Score=80.72 Aligned_cols=162 Identities=9% Similarity=0.049 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh----cCchhHHHHHHHH-
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSLPMFTGFVI- 135 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~l~~~~~~- 135 (256)
.++..+++.+......+.+...+|.++.+..|.+..+.+.+.+.+.++.+++.+++|.++|| ..+|........+
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 44555566666566666666777778766567899999999999999999999999999999 6666666555444
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchh-hHHHHHHHHHHHH-HHhhhhhHHhhhhhcc
Q psy11010 136 MFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER-GNAMGIALGGLAL-GVLIGPPFGGIMYQFV 213 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r-~~~~g~~~~~~~l-g~~~g~~i~~~l~~~~ 213 (256)
..++.+......+........+....+.....+......++...+ +.| -...+.+..+.+. |.+.+++..+.....+
T Consensus 354 ~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g-~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 354 AIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAG-NTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccc-hHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 444434444444344444444445555666677778888888765 444 3444444444444 4444444445556667
Q ss_pred CchHHHHHHH
Q psy11010 214 GKTAPFLILS 223 (256)
Q Consensus 214 g~~~~~~~~~ 223 (256)
+|.+.|....
T Consensus 433 ~~~~~f~~~~ 442 (495)
T KOG2533|consen 433 GWGAVFYMLV 442 (495)
T ss_pred hhhhHHHHHH
Confidence 8888884433
No 238
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.59 E-value=5.4e-07 Score=57.41 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=58.0
Q ss_pred HHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHH
Q psy11010 66 AIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
-...++.........|..+.+. ++.|.++.++|.+.++..+...++.+++|.++||+++++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~-~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYL-KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhh-hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3444555566667788888886 568999999999999999999999999999999999988887765543
No 239
>KOG1237|consensus
Probab=98.58 E-value=3.1e-06 Score=74.41 Aligned_cols=181 Identities=14% Similarity=0.028 Sum_probs=138.6
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhc-CchhHHHHHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGF 133 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~~~ 133 (256)
+...|+....+.....+.......+..-+..|+.++++.+...+.-.++.+.-........+++++|-| ||-+.+.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 344555555555555566666655555566677889999888888888888888888889999999975 8889999998
Q ss_pred HHHHHHHHHHHhhch-------------------------HHHHHHHHHHHHhhhhchhhhhhhhhhhccc---Ccchh-
Q psy11010 134 VIMFLSTLIFAFGRT-------------------------YGVLFLARSLQGIGSSCSSVSGMGMLAERYP---DDRER- 184 (256)
Q Consensus 134 ~~~~~~~~~~~~~~~-------------------------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~---~~~~r- 184 (256)
++..++..+..+... ...++.+..+..+|.|+.-+...++-+|.++ +++.+
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 888888655543211 2356667778889999999999999999997 21223
Q ss_pred -hHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 185 -GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 185 -~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
...+.++....++|..++..+.-++-+..+|.+.|.+..+..+++.++.+.
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 377888999999999999888888888899999999988887776655543
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.57 E-value=3.3e-06 Score=74.47 Aligned_cols=176 Identities=9% Similarity=-0.032 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhh-cCcc-hhHHH-HHHHHHHHHHHhhhHHHHhhhhcC--------chh
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYL-MGET-KAVGV-MFGSKAFVQLLANPLVGILTHRVG--------YSL 127 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-~~~~~-~~~~~~~~~~~~~~~~g~l~dr~G--------~r~ 127 (256)
...++++++..+........+..-+.+. .+.+ |.+. .+... ++++..+++.+|.+..|.+....- +|+
T Consensus 352 ~~d~Wll~~~~~cg~g~gl~~~~N~~qI-~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt 430 (591)
T PTZ00207 352 TARLWCLLWSIFCCVGAHFVIIFNARFI-YTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPIT 430 (591)
T ss_pred chhHHHHHHHHHHhhCchheeeecHHHH-HHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchh
Confidence 3455566655554333333333333333 4556 5522 32222 789999999999999998872221 223
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhh-hhHH
Q psy11010 128 PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIG-PPFG 206 (256)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g-~~i~ 206 (256)
..+....++.++.+++.+.-....+++..++.|++.|..++.....++|+|. |+-|+-..+......+|.++- -.+.
T Consensus 431 ~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg--k~~g~~yN~~~~a~pigs~~~n~~l~ 508 (591)
T PTZ00207 431 IALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA--KDPAKHYNFCFLGSVLSAIFLNRLLY 508 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc--cchHHHhhHHhHHHHHHHHHHHHHHH
Confidence 3333333366666666665433678999999999999999999999999995 688888888888888887775 5567
Q ss_pred hhhhhc----------cC---chHHHHHHHHHHHHHHhHhhhee
Q psy11010 207 GIMYQF----------VG---KTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 207 ~~l~~~----------~g---~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
|.++|+ .| ++.+|++.+++++.+.+......
T Consensus 509 G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 509 GEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 777754 13 78999999999998887765544
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.56 E-value=4e-06 Score=72.57 Aligned_cols=131 Identities=13% Similarity=0.066 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhhcCc--hh----H-HHHHHHHHHHHHHHHHhh---------chHHHHHHHHHHHHh
Q psy11010 98 VGVMFGSKAFVQLLANPLVGILTHRVGY--SL----P-MFTGFVIMFLSTLIFAFG---------RTYGVLFLARSLQGI 161 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~--r~----~-l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~ 161 (256)
.+|..+++.+..++.+|+.+++=.|..+ |. . +.+|+++.+++.+.+.++ .+.+++++..+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5788888999888888888877666532 21 1 577888888887666431 256778888999999
Q ss_pred hhhchhhhhhhhhhhcccCcchhhHHHHHHHHH-HHHHHhhhhhHHhhhhhc------------cCchHHHHHHHHHHHH
Q psy11010 162 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQF------------VGKTAPFLILSALALG 228 (256)
Q Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~-~~lg~~~g~~i~~~l~~~------------~g~~~~~~~~~~~~~~ 228 (256)
|.-...|...+.+++..|+ +.||+.+|.+... ..+|..++..+++..... ..+...|...+...++
T Consensus 390 gEl~~sPvgls~~~~laP~-~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIP-GVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHChHHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999998 9999999998663 357776666666554311 1255567777766665
Q ss_pred H
Q psy11010 229 D 229 (256)
Q Consensus 229 ~ 229 (256)
.
T Consensus 469 ~ 469 (493)
T PRK15462 469 C 469 (493)
T ss_pred H
Confidence 5
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.52 E-value=9.8e-07 Score=56.77 Aligned_cols=79 Identities=11% Similarity=0.021 Sum_probs=68.9
Q ss_pred HhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHH
Q psy11010 73 NMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL 152 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
+.+.+.+.|++|. ++++.++|.++.|++.+.+.+|+.++.+...++.++..+++.+..+.+...+..+.+++.++.+..
T Consensus 5 GigRFayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 5 GIGRFAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhHHHHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 4455566677666 578899999999999999999999999999999999888999999999999999999998877654
No 243
>KOG0255|consensus
Probab=98.43 E-value=2.5e-05 Score=68.70 Aligned_cols=143 Identities=19% Similarity=0.166 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG---VLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
..................+.+.|++|||.....+.++..++.++.++..... ...+...+...+.+..+.....+.+
T Consensus 353 ~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
T KOG0255|consen 353 YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSA 432 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444446666666678999999999999999999999999888765332 2444455555666666777789999
Q ss_pred hcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 176 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 176 ~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
|++|+ ..|+.+.+.......+|.+++|.+...... ......+.+.+....+...+..++.|+....
T Consensus 433 el~pt-~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 433 ELIPT-VVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred hhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 99998 999999999999999999999998866554 2222232334555555555665666665443
No 244
>KOG2816|consensus
Probab=98.39 E-value=5.5e-06 Score=71.11 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=112.1
Q ss_pred HHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHH-HhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhh
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVG-ILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 162 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 162 (256)
..++...++++..+.+...+...+...+++.+.. .+...+|-|+++..|+..-.+..++.+++++.|+++....+.++
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~- 343 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVAL- 343 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHh-
Confidence 4456777999999999999999999999998876 88888999999999999999999999999999998888777666
Q ss_pred hhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 163 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 163 ~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
.+...+...++++.+..+ +++|+++++......+..+++|.+-+.+..
T Consensus 344 ~~~~~pa~~s~~s~~v~~-~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 344 AGIVFPAIRAFASILVSP-EEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hcchhHHHHhHHHhhccc-ccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 567888889999999998 999999999999999999999999887754
No 245
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.36 E-value=4.2e-06 Score=70.38 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhc---------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc--chhhHHHHHHHHHH
Q psy11010 127 LPMFTGFVIMFLSTLIFAFGR---------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGL 195 (256)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~--~~r~~~~g~~~~~~ 195 (256)
+.+.++.++..+|.+++.++. +...++++..+.++|.|+.-|...++.+|.++++ ++|.+++.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888754421 2356888999999999999999999999999862 36778889999999
Q ss_pred HHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 196 ALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 196 ~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
++|..+++.+.+++-++.||.+.|.+.++..+++.+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999888876665543
No 246
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.29 E-value=2.7e-06 Score=70.64 Aligned_cols=159 Identities=19% Similarity=0.081 Sum_probs=111.5
Q ss_pred hhHHHHHhhhcC-------cchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHH-HHHHHHHHHHHHHHhhch--HH-
Q psy11010 82 VARENRHKYLMG-------ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMF-TGFVIMFLSTLIFAFGRT--YG- 150 (256)
Q Consensus 82 ~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~-~~~~~~~~~~~~~~~~~~--~~- 150 (256)
+.|.|.++..+. +.+..+...++..+..++.+|+.|.++|+.|+||..+ ...++..+..+.+.++++ ++
T Consensus 37 ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~ 116 (438)
T COG2270 37 IFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLL 116 (438)
T ss_pred hhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHH
Confidence 345555554333 2356788889999999999999999999999666554 445555666666666554 43
Q ss_pred HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH--hhh-h---------------hc
Q psy11010 151 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG--GIM-Y---------------QF 212 (256)
Q Consensus 151 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~--~~l-~---------------~~ 212 (256)
..++...+..++.........+++.+..++ ++-++..++-.....+|+.+.-.+. +.+ . +.
T Consensus 117 ~~l~~~il~~i~~~~s~Vfyds~L~~~~~k-~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~ 195 (438)
T COG2270 117 LLLLFLILASIGFEFSNVFYDSMLPRLTTK-DNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADG 195 (438)
T ss_pred HHHHHHHHHHHhcchhheehhhHhhhhcCc-cccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccc
Confidence 445556778888888888899999999997 7888887775555556655443332 111 1 23
Q ss_pred cCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 213 VGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
..-|.++.+.++..++..+..++..++.+
T Consensus 196 ~~~ri~~~l~A~W~li~~iPm~~~v~~~~ 224 (438)
T COG2270 196 EDVRITGLLAALWWLLFALPMILNVHDAE 224 (438)
T ss_pred ccchhHHHHHHHHHHHHHhHHHhcccccc
Confidence 34788899999999998888887776654
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.23 E-value=0.00023 Score=61.29 Aligned_cols=145 Identities=9% Similarity=-0.046 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcC-----cchhHHHHHHHHHHHHHHh-hhHHHHhhhhcCchhHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMG-----ETKAVGVMFGSKAFVQLLA-NPLVGILTHRVGYSLPMFTGF 133 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~G~r~~l~~~~ 133 (256)
..+....+..++..+.++..-++ .+.+.. +.+.+.++-+...+...+. .++.+++++|++|++++-...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~l-----KD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDT-----KDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 34444555555555555544444 455544 3357888888777766665 888999999999999987776
Q ss_pred HHHHHHHHHHHhh----c---------------------------hHHHHHHHHHHHHhhhhchhh-hhhhhhhhcccCc
Q psy11010 134 VIMFLSTLIFAFG----R---------------------------TYGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDD 181 (256)
Q Consensus 134 ~~~~~~~~~~~~~----~---------------------------~~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~~~~ 181 (256)
..+....+++++. + +.|...+..+...+-...... ....++.|.++.
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~- 160 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI- 160 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-
Confidence 6666666555543 1 122222333444554455555 778999999998
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHhhhh
Q psy11010 182 RERGNAMGIALGGLALGVLIGPPFGGIMY 210 (256)
Q Consensus 182 ~~r~~~~g~~~~~~~lg~~~g~~i~~~l~ 210 (256)
++-.|..++++.+.++|.++++.+..++.
T Consensus 161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 161 DEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988876
No 248
>PRK03612 spermidine synthase; Provisional
Probab=98.19 E-value=0.00025 Score=62.14 Aligned_cols=157 Identities=15% Similarity=0.104 Sum_probs=90.9
Q ss_pred HHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH---H-HHH---
Q psy11010 71 LDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS---T-LIF--- 143 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~---~-~~~--- 143 (256)
+.++....+..+..-.+...+|.+..+.+.+.+++..+..+|+.+.+++.++.-++.. .+-..+..++ . ++.
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~ 103 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAF 103 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444444555678888899999999999999999998888744322222 1111111111 1 111
Q ss_pred HhhchH-HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhh-hccCchHHHHH
Q psy11010 144 AFGRTY-GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLI 221 (256)
Q Consensus 144 ~~~~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~-~~~g~~~~~~~ 221 (256)
.+.... ..++...++.++..|...|....+..+... ++-+...|-.+....+|+++|.++.+++. ...|-....++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~--~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~ 181 (521)
T PRK03612 104 AFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD--QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAAL 181 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 111111 112333455677777777776665554332 34567788888888999999999988654 46675544444
Q ss_pred HHHHHHHHH
Q psy11010 222 LSALALGDG 230 (256)
Q Consensus 222 ~~~~~~~~~ 230 (256)
.+.+.+++.
T Consensus 182 ~a~l~~~~a 190 (521)
T PRK03612 182 TGSLNLLAA 190 (521)
T ss_pred HHHHHHHHH
Confidence 444444433
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00031 Score=59.89 Aligned_cols=141 Identities=19% Similarity=0.227 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCch-------hHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHHH
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYS-------LPMFTGFVIMFLSTLIFAFG----------RTYGVLFLARSLQ 159 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 159 (256)
..++..++..+..++.+|+..++-.+.+++ .=+-++.++.+.+.++.... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 457888888888899999988888875443 11355666666666655432 2678888999999
Q ss_pred HhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh------hhhccCchHHHHHHHHHHHHHHhHh
Q psy11010 160 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI------MYQFVGKTAPFLILSALALGDGCKC 233 (256)
Q Consensus 160 G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~------l~~~~g~~~~~~~~~~~~~~~~~~~ 233 (256)
++|.=...|...+++....|+ +-.+..++++-.....|..++..+.+. ..+.......|+..++..++..+..
T Consensus 405 s~gEL~iSpvGLs~~t~laP~-~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPP-ALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999998 999999999998888888888777763 2333445677888887777766665
Q ss_pred hheee
Q psy11010 234 NYTIV 238 (256)
Q Consensus 234 ~~~~~ 238 (256)
+...|
T Consensus 484 ~~~~~ 488 (498)
T COG3104 484 LLLSP 488 (498)
T ss_pred HHhhH
Confidence 54443
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.02 E-value=9.6e-05 Score=61.97 Aligned_cols=138 Identities=13% Similarity=0.143 Sum_probs=89.9
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHH--HHHHHHHH-
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGF--VIMFLSTL- 141 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~--~~~~~~~~- 141 (256)
+.+.++.+......+.+.+... .+......++-+...++.+|..+++--.-.+ |+ |++.+... .+..+..+
T Consensus 252 L~lVY~aEY~InqGv~~tl~fp--~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l 325 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLLFP--NSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLL 325 (402)
T ss_pred HHHHHHHHHHHHhchHHHhcCC--ccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHH
Confidence 3344444444444443332211 2233345677788888888877765543222 33 33333322 22222222
Q ss_pred --HHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhh
Q psy11010 142 --IFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 142 --~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l 209 (256)
+.-+.++.+.+++..+..|+..|..+......+.|..++ ++|..++|....+-++|..++.+++-++
T Consensus 326 ~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~-~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 326 QSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPP-EDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 223457888888889999999999999999999999998 9999999999999999998887776554
No 251
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.01 E-value=0.0001 Score=66.26 Aligned_cols=152 Identities=12% Similarity=0.117 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHH-HHHHhhhHHHHhhhhcC--chhHHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVG--YSLPMFTGFVIM 136 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~l~~~~~~~ 136 (256)
+.++...+..++.......+...+|.++++++|.++.+++++.+...+ +.+++.++.|+++||++ .|+.+..+.++.
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLS 409 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHH
Confidence 345555566666666666677788999988999999999999988776 67889999999999998 456666666655
Q ss_pred HHHHHHHHh---------------------------h----------c--------------------------------
Q psy11010 137 FLSTLIFAF---------------------------G----------R-------------------------------- 147 (256)
Q Consensus 137 ~~~~~~~~~---------------------------~----------~-------------------------------- 147 (256)
.++.++... . .
T Consensus 410 ~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~ 489 (633)
T TIGR00805 410 TLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNM 489 (633)
T ss_pred HHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcc
Confidence 555433110 0 0
Q ss_pred --------------------------h-HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHH-HHHH
Q psy11010 148 --------------------------T-YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGL-ALGV 199 (256)
Q Consensus 148 --------------------------~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~-~lg~ 199 (256)
+ +..+++..++..+..+.........+-+.+|+ ++|..++|+..... -+|.
T Consensus 490 ~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~-~~rs~alg~~~~~~rllg~ 568 (633)
T TIGR00805 490 VYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNP-EEKSLAIGLQWLCMRVFAT 568 (633)
T ss_pred eecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCc-ccchHHhhHHHHHHHHhcC
Confidence 0 11222333333333334444445566678887 99999999965544 5688
Q ss_pred hhhhhHHhhhhhc
Q psy11010 200 LIGPPFGGIMYQF 212 (256)
Q Consensus 200 ~~g~~i~~~l~~~ 212 (256)
+-+|++.|++.|.
T Consensus 569 iP~pi~fG~~iD~ 581 (633)
T TIGR00805 569 IPAPILFGLLIDV 581 (633)
T ss_pred CChhHHHhhhhhc
Confidence 9999999999875
No 252
>KOG2563|consensus
Probab=97.89 E-value=2.2e-05 Score=65.79 Aligned_cols=179 Identities=15% Similarity=0.078 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-hhHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLS 139 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~~~~~~~~~ 139 (256)
.+.++.+++.+....++.....+...+ ..-|.+....|++.....++.++++.+.|.+.||... |+.+.+......++
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 344444444333333333333333222 3345666789999999999999999999999999874 45555555554444
Q ss_pred HHHH-Hh---hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-
Q psy11010 140 TLIF-AF---GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG- 214 (256)
Q Consensus 140 ~~~~-~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g- 214 (256)
.... .. ....+.++..-.+.|.+.....|...-+..|..-| ..-+.-.|+.+....+-+++-..+.+...+..+
T Consensus 346 ~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyP-v~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~ 424 (480)
T KOG2563|consen 346 TLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYP-VAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP 424 (480)
T ss_pred HHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccc-cCCcccceeEEeehhHHHHHHHHHHHHHhhccCC
Confidence 2221 11 12344566677788888888999888888887555 566667777766666655666666677766555
Q ss_pred ---chHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 215 ---KTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 215 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
+...-+.....+++..++..++.++.+
T Consensus 425 ~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 425 PGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 443444455555555555566555433
No 253
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.82 E-value=0.00019 Score=61.61 Aligned_cols=148 Identities=13% Similarity=0.038 Sum_probs=104.8
Q ss_pred hhhc---CcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH-hh---------chHHHHHHH
Q psy11010 89 KYLM---GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA-FG---------RTYGVLFLA 155 (256)
Q Consensus 89 ~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~-~~---------~~~~~~~~~ 155 (256)
+..+ .++...+.+..+..++..++..+..++.-+..-|+++.+..++.++..+.-. +. ++.+-.+.-
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd 324 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGD 324 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEh
Confidence 4455 8888899999888889999998888877777888888887776666544321 11 122222233
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC--------chHHHHHHHHHHH
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--------KTAPFLILSALAL 227 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g--------~~~~~~~~~~~~~ 227 (256)
-++..+.....+-+...+++|.+|+ ..-|+..++.....++|..++..++..+.+..+ ..+..++..+..+
T Consensus 325 ~~l~~~~~~i~~mP~lvl~a~lcP~-G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~l 403 (433)
T PF03092_consen 325 TILEEVIGMIAFMPSLVLAARLCPK-GSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQL 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHH
Confidence 4566666667777778999999998 999999999999999999999999988887654 2344455555554
Q ss_pred HHHhHhhhee
Q psy11010 228 GDGCKCNYTI 237 (256)
Q Consensus 228 ~~~~~~~~~~ 237 (256)
+...+..+..
T Consensus 404 l~l~ll~lLp 413 (433)
T PF03092_consen 404 LPLPLLFLLP 413 (433)
T ss_pred HHHHHHHHcC
Confidence 4444433433
No 254
>KOG2325|consensus
Probab=97.82 E-value=6.9e-05 Score=64.16 Aligned_cols=182 Identities=15% Similarity=0.198 Sum_probs=111.5
Q ss_pred cccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHH----HHHHHHHhhhHHHHhh-hhcCchhHH
Q psy11010 55 RESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGS----KAFVQLLANPLVGILT-HRVGYSLPM 129 (256)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~g~l~-dr~G~r~~l 129 (256)
.+..+...+.+.+..+...+....+....+......++.+.++.-+..+. ..+......+..+... -++.+|..+
T Consensus 257 ~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~ 336 (488)
T KOG2325|consen 257 PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRII 336 (488)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceee
Confidence 34455555555555555555555555555555556677766555444443 3333333333333332 233445555
Q ss_pred HHHHHHHHHHHHHHHh----h---------------------------chHHHHHHH-HHHHHhhhhchhhhhhhhhhhc
Q psy11010 130 FTGFVIMFLSTLIFAF----G---------------------------RTYGVLFLA-RSLQGIGSSCSSVSGMGMLAER 177 (256)
Q Consensus 130 ~~~~~~~~~~~~~~~~----~---------------------------~~~~~~~~~-~~l~G~~~g~~~~~~~~~~~~~ 177 (256)
..++++......+..+ . .+.+.++.+ -++.|++.=.......++-+|.
T Consensus 337 ~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySki 416 (488)
T KOG2325|consen 337 LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKI 416 (488)
T ss_pred eehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHH
Confidence 6554444433332221 0 012223333 2346666666677778999999
Q ss_pred ccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 178 YPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 178 ~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
..+ ++++...++++....++..++|.+...+....|.++...+.++..++...+.....
T Consensus 417 Lgp-~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 417 LGP-RDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred hCC-ccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 998 99999999999999999999999999999999999888877777666555444333
No 255
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.71 E-value=7.8e-06 Score=71.78 Aligned_cols=156 Identities=13% Similarity=0.114 Sum_probs=0.0
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHH-HHHHhhhHHHHhhhhcC--chhHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVG--YSLPMFTG 132 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~l~~~ 132 (256)
..+...+....++.....+....+..+.|.|++.+++.++++++++..+..+ +.+++.+++|++..|+. .|+.+-..
T Consensus 301 Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~ 380 (539)
T PF03137_consen 301 LLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFC 380 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHH
Confidence 3445566777777777788888888899999999999999999999887777 67788888999999885 44444443
Q ss_pred HHHHHHHHHH---HHh--------h---c----------------------------------------hHHHHHHHHHH
Q psy11010 133 FVIMFLSTLI---FAF--------G---R----------------------------------------TYGVLFLARSL 158 (256)
Q Consensus 133 ~~~~~~~~~~---~~~--------~---~----------------------------------------~~~~~~~~~~l 158 (256)
.++..+..+. ..+ + . ++..+++..++
T Consensus 381 ~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~ 460 (539)
T PF03137_consen 381 IVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFI 460 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHH
Confidence 3333333322 100 0 0 01223333333
Q ss_pred HHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHH-HHHHHhhhhhHHhhhhhc
Q psy11010 159 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 159 ~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~-~~lg~~~g~~i~~~l~~~ 212 (256)
.-+..+.........+-+.+|+ ++|..++|+.... .-+|.+-||++.|.+.|.
T Consensus 461 ~~~~~~~~~~p~~~i~LR~V~~-~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 461 LSFFTFMSQVPSTLITLRCVPP-EQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHhcccchheeeeccCCh-hhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 3344444455555666688887 9999999996554 556888899999999885
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.67 E-value=0.002 Score=54.24 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
+.+.-+-.+-..+..+.+.++.+|+..+.-+....+++.++.++.+++++.+.-+++-.+.+++.|........+.+ .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 34555555666777777888999998776677777889999999999999998889999999999988887777644 55
Q ss_pred cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC--chHHHHHHHHHHHHHHhHhhheee
Q psy11010 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--KTAPFLILSALALGDGCKCNYTIV 238 (256)
Q Consensus 179 ~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~ 238 (256)
++ ...+.+..+.+.++++|+..-..+.+ .| .|..+.+..++.++..+..++.++
T Consensus 141 ~~-----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 141 GK-----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred Cc-----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 43 24677888888888888877766665 55 466777777766554444444444
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.51 E-value=0.019 Score=49.08 Aligned_cols=127 Identities=16% Similarity=0.130 Sum_probs=90.2
Q ss_pred chhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh------hc----h
Q psy11010 79 VEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF------GR----T 148 (256)
Q Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~------~~----~ 148 (256)
..+.+..|+..+ |+++..+|..-+...+....+.....++.+|+|..+.=+++...-.+...++.. .+ +
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 345566676444 999999999999999999999999999999999877777766544433332221 11 2
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHh
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 207 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~ 207 (256)
...++.+-.+.=+|.=.......-++.|..|+ ++||...|.-+...++--.+-..++-
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~-~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPE-SERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH-HHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344444444455445566667889999997 99999999988888776666544433
No 258
>KOG4332|consensus
Probab=97.38 E-value=0.00023 Score=56.05 Aligned_cols=143 Identities=20% Similarity=0.164 Sum_probs=95.0
Q ss_pred HhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchh
Q psy11010 88 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS 167 (256)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 167 (256)
-+.+|....++|.+.....-..++...+.|.+.||-|||+.-+.-++...++++ .-.++++-.++++|.+.|+..+..+
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHH
Confidence 466788888999998888888889999999999999999986665555444432 2346778889999999999999988
Q ss_pred hhhhhh-hhhcccCcchhhHHHHHHHH----HHHHHHhhhhhH----Hhhhhhcc--CchHHHHHHHHHHHHHHhHhh
Q psy11010 168 VSGMGM-LAERYPDDRERGNAMGIALG----GLALGVLIGPPF----GGIMYQFV--GKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 168 ~~~~~~-~~~~~~~~~~r~~~~g~~~~----~~~lg~~~g~~i----~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~ 234 (256)
.+.-++ ++|.. ++|+.-.-+... +..+|.-+-.++ +..+.+.. |.-.+|-..+++..++..+++
T Consensus 143 SaFEsWliaEHn---ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 143 SAFESWLIAEHN---EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred HHHHHHHHHHhh---hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 887764 45554 344433322211 222333333333 33444543 566777776666666555544
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.19 E-value=0.068 Score=45.82 Aligned_cols=173 Identities=14% Similarity=0.068 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~ 141 (256)
...++...++.....-+.....+.++.+-+.-+---.+...-.-.+..+++++..|.+.||..|.+++-.+.++--++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 34455566666666666655666666554443333344444455566778888999999999999887665443322222
Q ss_pred HHH------hh--c----hHHHH---HHHHHHHHhhhhchhhh-hhhhhhhc----c--cCcchhhHHHHHHHHHHHHHH
Q psy11010 142 IFA------FG--R----TYGVL---FLARSLQGIGSSCSSVS-GMGMLAER----Y--PDDRERGNAMGIALGGLALGV 199 (256)
Q Consensus 142 ~~~------~~--~----~~~~~---~~~~~l~G~~~g~~~~~-~~~~~~~~----~--~~~~~r~~~~g~~~~~~~lg~ 199 (256)
+.+ +. . +.+.. ++...+.|.-....... ..+.=-|| . ++ +.+.+.++...-.--+..
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHHHH
Confidence 111 11 1 01111 22222222211111111 11111123 2 22 455666666666667799
Q ss_pred hhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 200 LIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 200 ~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
+++|++.|.+.+..+......+.++..+++..+=++
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999889888888888888887765443
No 260
>KOG3762|consensus
Probab=97.19 E-value=0.00031 Score=60.40 Aligned_cols=77 Identities=22% Similarity=0.343 Sum_probs=59.7
Q ss_pred HHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHH-HHHHHHHHHHHHhh
Q psy11010 69 LVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG-FVIMFLSTLIFAFG 146 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~-~~~~~~~~~~~~~~ 146 (256)
.++.......+.|+++.| -+++|+++.+.|.+++.--+..+++.|++|+++||+-+|+.++++ ++......++..+.
T Consensus 20 ~~~~~~~~g~l~pll~vy-~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVY-FKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred eeeeeecccccchHHHHH-HHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 344455666777888887 478999999999999999999999999999999999866555554 55555555555553
No 261
>KOG3098|consensus
Probab=97.10 E-value=0.0087 Score=51.34 Aligned_cols=105 Identities=14% Similarity=0.064 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCc
Q psy11010 102 FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD 181 (256)
Q Consensus 102 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~ 181 (256)
.++.+....+++++.+.+.|+.|.|+.++++........+.+-+-+ -+.++++..+.|+|.+..+..-..+++|..++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~- 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTR- 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCCh-
Confidence 6777778888999999999999999999999998888777666644 56678899999999999999999999999998
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 182 RERGNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 182 ~~r~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
+.+.+..++.=.....+.++|..+...
T Consensus 134 ~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 899998888766666666666555443
No 262
>KOG3098|consensus
Probab=97.05 E-value=0.057 Score=46.50 Aligned_cols=142 Identities=13% Similarity=0.187 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHhHhhhchhhhHHHHHhh--hcCcc-hhHHHHHHHHHHHHHHhhhHHHHhhh---hcCchhHHHHHHHH
Q psy11010 62 LVIVAIALVLDNMLLTTVEDVARENRHKY--LMGET-KAVGVMFGSKAFVQLLANPLVGILTH---RVGYSLPMFTGFVI 135 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d---r~G~r~~l~~~~~~ 135 (256)
...+....+..+........+.|.-+.-. .+.+. ...+.......++..++..+.+.+++ ++|+++.+.++.++
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~ 321 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIII 321 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHH
Confidence 34444444444455555555544443222 22222 23344444555566666666777765 57899999999888
Q ss_pred HHHHHHHHHhh------------------chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHH
Q psy11010 136 MFLSTLIFAFG------------------RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLAL 197 (256)
Q Consensus 136 ~~~~~~~~~~~------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~l 197 (256)
..++.++.-.. ++....++.-++.|++-+......+.++.+.+| ++|..+.+++..-..+
T Consensus 322 ~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~--~~~~~~fsi~kfyq~~ 399 (461)
T KOG3098|consen 322 HLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP--DDRAQAFSLFKFYQSV 399 (461)
T ss_pred HHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHH
Confidence 88887766431 235567778899999999999999999999995 6888888887776666
Q ss_pred HHhhhhhH
Q psy11010 198 GVLIGPPF 205 (256)
Q Consensus 198 g~~~g~~i 205 (256)
+..++-..
T Consensus 400 ~s~v~~f~ 407 (461)
T KOG3098|consen 400 ASCVAFFF 407 (461)
T ss_pred HHHHHhhh
Confidence 66554333
No 263
>KOG3574|consensus
Probab=96.99 E-value=0.026 Score=47.06 Aligned_cols=148 Identities=11% Similarity=0.016 Sum_probs=92.0
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhh-----hcCchhHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-----RVGYSLPMF 130 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~G~r~~l~ 130 (256)
+.....+..+.+.+.+++....... ..|.++ +.-|.|-++.+....++. - .-..+.+..+.| |+||||..+
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL-~ak~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLL-QAKGVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHh-cCCCcchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhcccccee
Confidence 4445567777777888888777765 556665 455667666554433221 1 123566788888 999988765
Q ss_pred HH-HHHHHHHHHHHHh-----------hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHH
Q psy11010 131 TG-FVIMFLSTLIFAF-----------GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG 198 (256)
Q Consensus 131 ~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg 198 (256)
+- ..+....+.+++. .++........++.-+..+.--.+.-.+.-.+..+ ++-|.+......+...|
T Consensus 103 vp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~-e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574|consen 103 VPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSR-ENLGYASTCQSVGQTAG 181 (510)
T ss_pred eehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH-hhcCchhHHHHHHHhhh
Confidence 42 2333333333332 12233333344566666666666677788888887 89999988888888888
Q ss_pred HhhhhhHHhh
Q psy11010 199 VLIGPPFGGI 208 (256)
Q Consensus 199 ~~~g~~i~~~ 208 (256)
.+++..+.-.
T Consensus 182 yfL~~~ifLa 191 (510)
T KOG3574|consen 182 YFLGNVVFLA 191 (510)
T ss_pred HHhhcceeeE
Confidence 8877655433
No 264
>KOG1330|consensus
Probab=96.94 E-value=0.0043 Score=52.66 Aligned_cols=134 Identities=15% Similarity=0.057 Sum_probs=78.8
Q ss_pred hhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC----chhHHHHHHHHH------HHHHHHH-Hh-hchH
Q psy11010 82 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG----YSLPMFTGFVIM------FLSTLIF-AF-GRTY 149 (256)
Q Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G----~r~~l~~~~~~~------~~~~~~~-~~-~~~~ 149 (256)
...++..+-.|.+..+..++..+...+..+|..++|.++||+- +-.......+.. .+.++.+ .. ..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s 348 (493)
T KOG1330|consen 269 AFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS 348 (493)
T ss_pred hHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHH
Confidence 3333333444556666677788888899999999999999842 212222222111 1111211 11 2222
Q ss_pred HHHHHHHHHHHhhhhch-hhhhhhhhhhcccCcchhhHHHHHHHH-HHHHHHhhhhhHHhhhhhcc-Cch
Q psy11010 150 GVLFLARSLQGIGSSCS-SVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPPFGGIMYQFV-GKT 216 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~-~~~~~~~~~~~~~~~~~r~~~~g~~~~-~~~lg~~~g~~i~~~l~~~~-g~~ 216 (256)
..+.+..++.|+..... ......+..|..|+ ++|..+.++-.. ...+|.+-+|.+.|.+.++. ||+
T Consensus 349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p-~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 349 MIFGLILFLVGETISWFNWATNNPIFLEVVPP-SRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHHHHHhcccccccceeeEecCc-ccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 33334445555544333 33345577788898 999999999654 44557777776889998864 555
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.87 E-value=0.052 Score=46.77 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCch--hHHHHH--HHHHHHHHHHHHhh---------chHHHHHHHHHHHHhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTG--FVIMFLSTLIFAFG---------RTYGVLFLARSLQGIGS 163 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~l~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~ 163 (256)
..-....+++++-.+|..+..+. ..-++| .+++.. =+++....+++... ++-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 34456677788888877755432 111222 333322 22333333444322 35566677799999999
Q ss_pred hchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHh
Q psy11010 164 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 207 (256)
Q Consensus 164 g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~ 207 (256)
|........+..+..++ ++|..+-.+...+..+|-.+|..++-
T Consensus 387 Gy~~s~~m~~~p~~v~~-~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDP-HEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred hHHHHHHHHhcCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 99999988888888888888877643
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.35 E-value=0.6 Score=40.89 Aligned_cols=152 Identities=13% Similarity=0.040 Sum_probs=91.5
Q ss_pred cchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHH-HHHHhhhHHHHhhhhcCchhHHHHHHHH
Q psy11010 57 SRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVI 135 (256)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~l~~~~~~ 135 (256)
..+..+..+.+..++..+.++..-..=...+.... .++.+..+=....+ +..+...+..+++|++++.+++-.....
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34455666666666655555544333111111111 33445555443333 4455667789999999999988666555
Q ss_pred HHHHHHHHHhh---------ch----------------------HHHHHHHHHHHHhhhhchhh-hhhhhhhhcccCcch
Q psy11010 136 MFLSTLIFAFG---------RT----------------------YGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRE 183 (256)
Q Consensus 136 ~~~~~~~~~~~---------~~----------------------~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~~~~~~ 183 (256)
+.....++++. ++ .|.+.+.-++.-+-.....+ ....++.|.++. ++
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~-~e 177 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTV-EE 177 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HH
Confidence 55554444431 11 12222222222332233333 457889999998 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 184 RGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 184 r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
-.|..++++.+.++|.+++..+..++.+
T Consensus 178 AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888777
No 267
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.18 E-value=0.12 Score=44.85 Aligned_cols=99 Identities=11% Similarity=-0.040 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCch--hHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML 174 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 174 (256)
.-|.+-++..+..++..+..|++-.++.+- ..+.+..++.+...++++..+|.+..+++.++.+.......+.+..-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888888889999999997777542 334444555555667778889999999999999999999999988888
Q ss_pred hhcccCcchhhHHHHHHHHHHH
Q psy11010 175 AERYPDDRERGNAMGIALGGLA 196 (256)
Q Consensus 175 ~~~~~~~~~r~~~~g~~~~~~~ 196 (256)
+..... +.-|..+|++++...
T Consensus 379 A~~L~~-~~~aLvFGiNtfvAl 399 (511)
T TIGR00806 379 ASSLSK-ELCALVFGINTFVAT 399 (511)
T ss_pred HHHhcc-cceEEEEecHHHHHH
Confidence 888875 666888888766443
No 268
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.97 E-value=0.18 Score=42.81 Aligned_cols=103 Identities=11% Similarity=-0.011 Sum_probs=77.6
Q ss_pred cCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHH--HHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhh
Q psy11010 92 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG--FVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVS 169 (256)
Q Consensus 92 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 169 (256)
+.....-|.+-++..+..+++....|++..++.+..-+..+ .++.+...++++..++.+..+++.++.+.......+.
T Consensus 281 ~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 281 DNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445678899999999999999999997777765444433 4455555667788899999999999888888888888
Q ss_pred hhhhhhhcccCcchhhHHHHHHHHHH
Q psy11010 170 GMGMLAERYPDDRERGNAMGIALGGL 195 (256)
Q Consensus 170 ~~~~~~~~~~~~~~r~~~~g~~~~~~ 195 (256)
+..-++..... +.-+..+|+..+..
T Consensus 361 A~~qIA~~l~~-e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 361 ASFQIAKNLSE-ERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHHhccc-cceeeeeeeHHHHH
Confidence 77777777765 67777777765543
No 269
>KOG3880|consensus
Probab=95.89 E-value=0.025 Score=45.67 Aligned_cols=173 Identities=13% Similarity=0.141 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcC--------------cchhHHHHHHHHHHHHHHhhhHHHHhhhhcCch
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMG--------------ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS 126 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r 126 (256)
.....++....+++.+..+.+.....+.++.+. .....|.+.-.-.+-..+..+.+..+.||+---
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 344555556667777777666655555554430 011134555555555566666677788887655
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 127 LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
.-+....++.+.+.++.+++++.++-+.+-.+..++.|.......++.+.+ ++ ...+.+..+.+..+.+|..--
T Consensus 93 ~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y-~~-----~~i~~WSSGTGgAGliGa~SY 166 (409)
T KOG3880|consen 93 FRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY-PS-----IVIAGWSSGTGGAGLIGASSY 166 (409)
T ss_pred hHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC-CC-----ceeccccCCCCcchhhhhhHH
Confidence 555666678888888999999999888888888888887766654444433 32 123334444444455555444
Q ss_pred hhhhhc--cCchHHHHHHHHHHHHHHhHhhheeec
Q psy11010 207 GIMYQF--VGKTAPFLILSALALGDGCKCNYTIVQ 239 (256)
Q Consensus 207 ~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
..+.+. ...+.+.+++..+.++-+...++.+++
T Consensus 167 a~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 167 AFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred HHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 445442 356777777777766655555555543
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.75 E-value=1.2 Score=38.64 Aligned_cols=151 Identities=8% Similarity=-0.037 Sum_probs=99.1
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhc---CcchhHHHHHHHHHH-HHHHhhhHHHHhhhhcCchhHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLM---GETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFT 131 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~l~~ 131 (256)
+..+..+..+.+..++..+.++..-++ .+.+. .++..+.++=+..-+ +..+..++..++.+++.+.+++-.
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~l-----KDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRSL-----KDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 334555555555555555555443333 34433 345667777777777 677888899999999999999877
Q ss_pred HHHHHHHHHHHHHhh---------ch-----------------------HHHHHHHHHHHHhhhhchhh-hhhhhhhhcc
Q psy11010 132 GFVIMFLSTLIFAFG---------RT-----------------------YGVLFLARSLQGIGSSCSSV-SGMGMLAERY 178 (256)
Q Consensus 132 ~~~~~~~~~~~~~~~---------~~-----------------------~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~ 178 (256)
-+..+....+++++. ++ .|...+...+.-+=...... ....+..|.+
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776666666666541 11 12222222222222223333 4567888999
Q ss_pred cCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 179 PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 179 ~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
.. ++-.|..++++...+++..++..+..++.++
T Consensus 178 t~-~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 178 TI-EEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hH-HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 87 8999999999999999999998888888764
No 271
>KOG0637|consensus
Probab=95.72 E-value=0.045 Score=46.63 Aligned_cols=135 Identities=21% Similarity=0.120 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 99 GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
.|=..++.+...+.+....++.+|+|-|+++..+...+.++..+.+...+.+....-+...|+-.+.....-+..++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 34456777778888999999999999777777776667777767776666666666666666544444333333333211
Q ss_pred ---------------------c-CcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-chHHHHHHHHHHHHHHhHh
Q psy11010 179 ---------------------P-DDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGCKC 233 (256)
Q Consensus 179 ---------------------~-~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~ 233 (256)
. .+.-+|...|+.++...+..++.....|.+.+..| -+.+-+..+..++....+.
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i~ 492 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGIV 492 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHHH
Confidence 1 11334666777888888888888888887777665 3444444444444444433
No 272
>KOG3626|consensus
Probab=95.42 E-value=0.034 Score=50.33 Aligned_cols=83 Identities=14% Similarity=0.113 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHH-HHHhhhHHHHhhhhcC--chhHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFV-QLLANPLVGILTHRVG--YSLPMFTGFVI 135 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~G--~r~~l~~~~~~ 135 (256)
..++....++..+....+..+..++|.|++.++|.+.+.+..+.+...+. .+++..++|++..|+. .|....+..++
T Consensus 391 N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 391 NPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred CchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 44566677777777788888888999999999999999999999777764 5577777999999874 45555444444
Q ss_pred HHHHHH
Q psy11010 136 MFLSTL 141 (256)
Q Consensus 136 ~~~~~~ 141 (256)
..+..+
T Consensus 471 ~~l~l~ 476 (735)
T KOG3626|consen 471 SVLSLL 476 (735)
T ss_pred HHHHHH
Confidence 444433
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.39 E-value=0.005 Score=50.49 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhh-cCchhHHHHHH--HHHHHHHHHHHh----------hchHHHHHHHHHHHHhhhhch
Q psy11010 100 VMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGF--VIMFLSTLIFAF----------GRTYGVLFLARSLQGIGSSCS 166 (256)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~l~G~~~g~~ 166 (256)
....+++++-.+|+...++..=+ ..+|+++..+. +++....+++.. .++-+..++..++.|+..|..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888999988887764211 13444443321 222222233311 234456677788999999999
Q ss_pred hhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 167 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 167 ~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
......+..+..++ ++|..+-.+......+|-.+|..++
T Consensus 266 ~tl~m~~~p~~v~~-~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSP-EERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 8998888888888888877776654
No 274
>KOG1479|consensus
Probab=95.22 E-value=0.28 Score=41.48 Aligned_cols=108 Identities=14% Similarity=0.073 Sum_probs=72.3
Q ss_pred hHHHHHHH-HHHHHHHhhhHHHHhhhhcCchhHHHHHHH--HHHHHHHHHH------hhchHHHHHHHHHHHHhhhhchh
Q psy11010 97 AVGVMFGS-KAFVQLLANPLVGILTHRVGYSLPMFTGFV--IMFLSTLIFA------FGRTYGVLFLARSLQGIGSSCSS 167 (256)
Q Consensus 97 ~~~~~~~~-~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~l~G~~~g~~~ 167 (256)
..-.+..+ +++...+|.+...++.++- ||+..+..++ +..-...+|- +-.+-++++....+.|+..|-..
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 34444555 7888888877777776653 4444433332 2222222222 23466778888999999999999
Q ss_pred hhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHH
Q psy11010 168 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 168 ~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~ 206 (256)
.....+..+..++ +++..+-.+.......|-..|..++
T Consensus 362 sl~m~~aPk~v~~-~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 362 SLIMMYAPKQVKP-SEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hheehhcCCCCCh-HHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999987 7887777777777777777665553
No 275
>KOG3097|consensus
Probab=94.99 E-value=0.76 Score=37.78 Aligned_cols=102 Identities=16% Similarity=0.090 Sum_probs=65.0
Q ss_pred HHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC-cchh
Q psy11010 106 AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD-DRER 184 (256)
Q Consensus 106 ~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~-~~~r 184 (256)
.+..+..+.+.+.+..++|-|+.++++......... .-+-+.+..++..-.+.|++.+..+..--+++++.-.. .++|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~ 146 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQR 146 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhh
Confidence 344455666667899999999998887665554322 22335677788888999999999888777777765432 0233
Q ss_pred -------------hHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 185 -------------GNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 185 -------------~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
|....++++..-+|..+...+...
T Consensus 147 ~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~ 183 (390)
T KOG3097|consen 147 GEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTL 183 (390)
T ss_pred hhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233444555555565555555443
No 276
>KOG4332|consensus
Probab=94.93 E-value=0.96 Score=36.33 Aligned_cols=134 Identities=16% Similarity=0.045 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhhcCch--hHHHHHHHHHHHHHHHHHh----hc---hHHHHHHHHHHHHhhhhchhh
Q psy11010 98 VGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFVIMFLSTLIFAF----GR---TYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~G~~~g~~~~ 168 (256)
-|.+.+.+++..++++-+..++..|-..| ..+.+.+++.++...+... ++ +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999998887765543 3444444444444333222 11 223335666777788899999
Q ss_pred hhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhH
Q psy11010 169 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCK 232 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 232 (256)
...-+=++..|+ +.|...+.++..-..+-.-++-..-..-....+-|..|-+..+...++.+.
T Consensus 364 SimkmRsqyIPE-earstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPE-EARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCH-HHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 998899999997 999988887765444322221111000011124566777666665554443
No 277
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.54 E-value=0.57 Score=40.75 Aligned_cols=146 Identities=10% Similarity=0.018 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhHhhhchhhhHHHHHh-hhcCcchhHHHHHHH--HHHHHHHhhhHH-HHhhhhcCchhHHHHH-HHHHH
Q psy11010 63 VIVAIALVLDNMLLTTVEDVARENRHK-YLMGETKAVGVMFGS--KAFVQLLANPLV-GILTHRVGYSLPMFTG-FVIMF 137 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~--~~~~~~~~~~~~-g~l~dr~G~r~~l~~~-~~~~~ 137 (256)
..+.+.+++++...+......|..+++ .-+.+-++.+...-+ ..-.=.+-+|+. ...+.|+||||..++- ..+.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g 82 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSG 82 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHH
Confidence 345666777777776654445665544 135555555543211 111112222222 2335589999887543 23333
Q ss_pred HHHHHHHhhc----------------------hHH--HHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHH
Q psy11010 138 LSTLIFAFGR----------------------TYG--VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG 193 (256)
Q Consensus 138 ~~~~~~~~~~----------------------~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~ 193 (256)
+..+..+..- +.. .+....++.=+..+.--.+.-.+.-....+ ++++.|......
T Consensus 83 ~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~-~n~~~ASTcqtv 161 (544)
T PF13000_consen 83 ILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSP-ENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcCh-hhcchHHHHHHh
Confidence 3333332211 011 112222222222333333344555666776 899988888888
Q ss_pred HHHHHHhhhhhHHhhh
Q psy11010 194 GLALGVLIGPPFGGIM 209 (256)
Q Consensus 194 ~~~lg~~~g~~i~~~l 209 (256)
+.+.|.+++..+.-.+
T Consensus 162 G~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhhhhHHHHHHHHHhh
Confidence 8888888776655444
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.37 E-value=3.3 Score=36.23 Aligned_cols=73 Identities=19% Similarity=0.086 Sum_probs=57.1
Q ss_pred HHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
-++.|+........--..+.+.+|.+++|...+|-++...++..++..++.+.+.+..||.....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3446666667777667788888887678999999999988888877777779999999999777666555554
No 279
>KOG3810|consensus
Probab=93.94 E-value=1 Score=37.39 Aligned_cols=135 Identities=14% Similarity=0.018 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCch--hHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML 174 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 174 (256)
.-|..-.+..+..+++.+..|++.-++.|. ..+.++.+.-+...+++...++.|..+++.++...-.....+.+..-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 346667777888888999999998777665 344455566666666777788899999998888888888888888888
Q ss_pred hhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccC-----------chHHHHHHHHHHHHHHhHhhh
Q psy11010 175 AERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-----------KTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 175 ~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 235 (256)
++.... +.-|..+|+..+..- ++=.++.-.+.|..| +..-|.+.+++.++.+.....
T Consensus 352 A~nL~~-e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 352 ARNLSS-ELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred HHhhhh-hhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 888876 777888888765432 333334444444222 334467777777776554433
No 280
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=93.64 E-value=3.7 Score=34.28 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=57.1
Q ss_pred hcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH-------HHHHHh--hchHHHHHHHHHHHHh
Q psy11010 91 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS-------TLIFAF--GRTYGVLFLARSLQGI 161 (256)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~l~G~ 161 (256)
.|-+--+.+.+.+.+...+.+++...-++.|.--.-+.+.+-.++..++ ++.+++ .++.+.+++..++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 5667778899999999999998888887777533322222222221111 112222 3466778888899999
Q ss_pred hhhchhhhhhhhhhh
Q psy11010 162 GSSCSSVSGMGMLAE 176 (256)
Q Consensus 162 ~~g~~~~~~~~~~~~ 176 (256)
-.|...|....+...
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 999999988887776
No 281
>KOG1479|consensus
Probab=93.64 E-value=4 Score=34.70 Aligned_cols=30 Identities=13% Similarity=0.058 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
+...++.-.+.+++.+..........++.-
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~P 146 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLFP 146 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcCC
Confidence 445556667788888887777666666554
No 282
>KOG2601|consensus
Probab=93.47 E-value=2.9 Score=35.22 Aligned_cols=164 Identities=15% Similarity=0.015 Sum_probs=86.6
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH------H
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF------L 138 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~------~ 138 (256)
+.+++++.....-+.......++.+-.|.+-...+....+-.....+..++.|...|+..|+|++...+.+-- .
T Consensus 32 Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vag 111 (503)
T KOG2601|consen 32 LYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAG 111 (503)
T ss_pred hhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHH
Confidence 4444444444444444444555555455444444444444555566778888999999999999876654322 2
Q ss_pred HHHHHHhhc------hHHHHHHHHHHHHhhhhc--hhhhhhhhh--hhcc---cCcchhhHHH---HHHHHHHHHHHhhh
Q psy11010 139 STLIFAFGR------TYGVLFLARSLQGIGSSC--SSVSGMGML--AERY---PDDRERGNAM---GIALGGLALGVLIG 202 (256)
Q Consensus 139 ~~~~~~~~~------~~~~~~~~~~l~G~~~g~--~~~~~~~~~--~~~~---~~~~~r~~~~---g~~~~~~~lg~~~g 202 (256)
+.++..+.+ +.+.+..+.++.-.-.++ ......+++ -||. ..++.+.... +.....-..-..+.
T Consensus 112 glvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~La 191 (503)
T KOG2601|consen 112 GLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLA 191 (503)
T ss_pred HHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchh
Confidence 223333322 344444444443222221 111112211 1222 1114444443 33444444567889
Q ss_pred hhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 203 PPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 203 ~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
|.+.|.+....+.|..-.+.++..++
T Consensus 192 pv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 192 PVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhcccceeechhhhhhhhHHHHHH
Confidence 99999998887777665555555555
No 283
>KOG3810|consensus
Probab=92.74 E-value=0.34 Score=40.16 Aligned_cols=154 Identities=10% Similarity=0.042 Sum_probs=100.4
Q ss_pred hhhhHHHHH-hhhcCcchhHH-HHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q psy11010 80 EDVARENRH-KYLMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS 157 (256)
Q Consensus 80 ~~~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
.|.+.+|+. .+.+++..+.. -+.-...-.+.+.-.+.=.+.|-.-.|++++.-.+.......++.+.++.+.+-+.-+
T Consensus 24 eP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~ 103 (433)
T KOG3810|consen 24 EPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEF 103 (433)
T ss_pred CCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehh
Confidence 345444443 34455444332 1222222333344444445889888899988887777788888888899998888888
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc--CchHHHHHHHHHHHHHHhHhhh
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
+.|...+. ..+.++++-+..++ +++-++.|....+.-.|...|..++-.+.... ++...-.+......++.++..+
T Consensus 104 FyG~~tAa-EIAYysYIYs~Vd~-~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f 181 (433)
T KOG3810|consen 104 FYGPATAA-EIAYYSYIYSKVDP-EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALF 181 (433)
T ss_pred hcChHHHH-HHhhhheeeeecCH-HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhh
Confidence 88886654 44568888899998 99999999988888888888888877776533 3443333433333333333333
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.29 E-value=3.5 Score=35.66 Aligned_cols=76 Identities=17% Similarity=0.294 Sum_probs=41.5
Q ss_pred HHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHH-Hh----h---chHHHHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 104 SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF-AF----G---RTYGVLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 104 ~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~-~~----~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
...+...+..+..-.+..|+..|.-+..++++..+..++. .+ . ..++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3444444444555555666665434444544333332222 11 1 23555666677889988888888777766
Q ss_pred hcccC
Q psy11010 176 ERYPD 180 (256)
Q Consensus 176 ~~~~~ 180 (256)
.+|+
T Consensus 133 -~fp~ 136 (437)
T TIGR00939 133 -VFPS 136 (437)
T ss_pred -cCCH
Confidence 5554
No 285
>KOG3880|consensus
Probab=92.25 E-value=0.15 Score=41.41 Aligned_cols=109 Identities=10% Similarity=0.074 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHH-----HHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhhchhhhh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT-----GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSG 170 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 170 (256)
.|+=|....+.+|-.+..-..-. +--+..... -.+++.+.-.+..+.++++..++.-+.-|+-.|..+...
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~----~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNT 363 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINL----FTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNT 363 (409)
T ss_pred hcchhhheeeeeeEEEEeccceE----EechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHH
Confidence 35678777777765543322111 111111111 122333334455678899988888899999999888888
Q ss_pred hhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhh
Q psy11010 171 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 171 ~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l 209 (256)
.--+.+-.++ ++|-.+++....+-++|..++..++-.+
T Consensus 364 f~~i~~e~~p-d~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 364 FHNIHKETEP-DVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHhhcCCc-hHHHHhHhhheecchhhHHHHHHHhccc
Confidence 7778887777 8999999999988888888776665433
No 286
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=89.09 E-value=5.5 Score=27.25 Aligned_cols=44 Identities=27% Similarity=0.461 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
...+.......++..++..+.+.+.|..|.+..+.....+..+.
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 44566677777888888888888888888776665554444443
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.20 E-value=18 Score=31.97 Aligned_cols=74 Identities=20% Similarity=0.149 Sum_probs=55.4
Q ss_pred HHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHH
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 230 (256)
+..|+........--..+.+.+|.++++...+|-++...++-.++-..+++.+.+..||+....+.-++.++..
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 34666666666666677888888767788888988888888777777888999999999988776555444433
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=87.97 E-value=18 Score=31.87 Aligned_cols=57 Identities=18% Similarity=0.033 Sum_probs=45.8
Q ss_pred HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 155 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 155 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
..++..+..-..+.+..++=+.+.+| ..=|+.|.+.++..++|+-....+.-++.|.
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP-~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDP-AIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCc-ccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 44555666666777788888899998 9999999999999999998877777666654
No 289
>PRK10263 DNA translocase FtsK; Provisional
Probab=84.61 E-value=12 Score=36.86 Aligned_cols=20 Identities=15% Similarity=0.057 Sum_probs=9.3
Q ss_pred HHHHHHHhhhHHHHhhhhcC
Q psy11010 105 KAFVQLLANPLVGILTHRVG 124 (256)
Q Consensus 105 ~~~~~~~~~~~~g~l~dr~G 124 (256)
.+.+..+|..+...+..-||
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34444444444444444455
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.61 E-value=6.2 Score=26.55 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=16.0
Q ss_pred HHHHHHHhhhHHHHhhhhc-CchhHHHH
Q psy11010 105 KAFVQLLANPLVGILTHRV-GYSLPMFT 131 (256)
Q Consensus 105 ~~~~~~~~~~~~g~l~dr~-G~r~~l~~ 131 (256)
-.+..++.....||+.||| |-++..++
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 3344455566679999987 44444333
No 291
>KOG3574|consensus
Probab=83.84 E-value=19 Score=30.79 Aligned_cols=125 Identities=14% Similarity=-0.008 Sum_probs=74.1
Q ss_pred HhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHH--HH----HHHHHHHH---HHH-hhc-------hHH
Q psy11010 88 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT--GF----VIMFLSTL---IFA-FGR-------TYG 150 (256)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~--~~----~~~~~~~~---~~~-~~~-------~~~ 150 (256)
.-|.|.+....+++.....-..++.....|+++. |+|+.... +. ....+..+ ... +.+ .+.
T Consensus 292 Lle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta--~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~ 369 (510)
T KOG3574|consen 292 LLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA--GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYY 369 (510)
T ss_pred HHHcCCChhHheeeeeehhhHHHhhhhhheeecC--CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechH
Confidence 4567999988888774444444444444555443 22322211 11 11111111 111 111 222
Q ss_pred HHHH-HHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCc
Q psy11010 151 VLFL-ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 215 (256)
Q Consensus 151 ~~~~-~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~ 215 (256)
.+.+ ...+.+...-..+....++.+++.+| +.-|+.|.+.++-.++|+-.-..++.++.|...|
T Consensus 370 il~i~~y~~~~~~~ts~fv~~maf~aqisdp-~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 370 ILLITSYAFHQVFVTSMFVSGMAFHAQISDP-AIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc-ccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 2222 34454555555666678888999998 9999999999999999998888888888876543
No 292
>KOG1237|consensus
Probab=82.98 E-value=8.6 Score=34.58 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
|..+++--.++.|++.........=+.-+.+|+ +.|+.+.+++.+..++|..+...+......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~-sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPE-SMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667778899999999999989999999998 999999999999999999999998865544
No 293
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=80.20 E-value=34 Score=28.71 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=78.1
Q ss_pred HHHHhHhhhchhhhHHHHHh---hhcCcchhHHHHHHHHH-H----HHHHhhhHHHHhhhhcC--chhHHHHHHHHHHHH
Q psy11010 70 VLDNMLLTTVEDVARENRHK---YLMGETKAVGVMFGSKA-F----VQLLANPLVGILTHRVG--YSLPMFTGFVIMFLS 139 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~-~----~~~~~~~~~g~l~dr~G--~r~~l~~~~~~~~~~ 139 (256)
.+.+...+...+....++.. +.|.++.+.+-..+... + ..++++++.-.+.|+.| ++..+..+..+.+++
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 34444444444443333322 34566666665555333 3 34444555556666664 577777777777777
Q ss_pred HHHHHh--hch-------------HH---HHHHH--H-HHHHhhhhchhhhhhhhhhhcccC--cchhhHHHHHHHHHHH
Q psy11010 140 TLIFAF--GRT-------------YG---VLFLA--R-SLQGIGSSCSSVSGMGMLAERYPD--DRERGNAMGIALGGLA 196 (256)
Q Consensus 140 ~~~~~~--~~~-------------~~---~~~~~--~-~l~G~~~g~~~~~~~~~~~~~~~~--~~~r~~~~g~~~~~~~ 196 (256)
.++... ..| .. ..+.. | .+.|+.++......+.++-.|.|. .+.+..-.|+......
T Consensus 209 ~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM 288 (354)
T PF05631_consen 209 AVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFM 288 (354)
T ss_pred HHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHH
Confidence 665542 111 10 01111 2 257787888888888888888875 1234455666666666
Q ss_pred HHHhhhhhHHhhhhh
Q psy11010 197 LGVLIGPPFGGIMYQ 211 (256)
Q Consensus 197 lg~~~g~~i~~~l~~ 211 (256)
....+|..+...+..
T Consensus 289 ~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 289 VAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHHHHHHh
Confidence 666666666654443
No 294
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=79.06 E-value=26 Score=26.75 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHH
Q psy11010 189 GIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 225 (256)
Q Consensus 189 g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~ 225 (256)
.......-++.++|..+++.+.+..+.. ..++.+.+
T Consensus 165 ~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 165 ALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 3344444556666777777777777743 34444433
No 295
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=78.65 E-value=20 Score=28.95 Aligned_cols=35 Identities=14% Similarity=0.034 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHh-hchHHHHHHHHHHHHhhhhch
Q psy11010 132 GFVIMFLSTLIFAF-GRTYGVLFLARSLQGIGSSCS 166 (256)
Q Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~g~~ 166 (256)
+.+++++..++..+ .++.+.+.+..++.+++.++.
T Consensus 5 ~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 5 TLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 33444333333333 333444444444455444433
No 296
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=76.73 E-value=7.4 Score=26.16 Aligned_cols=50 Identities=24% Similarity=0.256 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
+..|-+...+.-.+++.++.+++..|+.-+-+.=.+|..+..++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 55788999999999999999999999988777767777766666655433
No 297
>PRK02237 hypothetical protein; Provisional
Probab=74.20 E-value=13 Score=25.08 Aligned_cols=50 Identities=14% Similarity=0.115 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
+..|-+...+.-.+++.++.+++..|+.-+-+-=.+|..+..++..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 34788999999999999999999999987766666776666666554433
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=72.68 E-value=59 Score=30.25 Aligned_cols=53 Identities=8% Similarity=-0.031 Sum_probs=32.6
Q ss_pred HHHhhhhc----CchhHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhhhhchhh
Q psy11010 116 VGILTHRV----GYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 116 ~g~l~dr~----G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~ 168 (256)
.+-+.|.= ||.+-++++.++++++.+...+.. ..+.+..+.++.+++.++...
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 34455533 556777888888888877666544 445555556666666554444
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=72.44 E-value=16 Score=26.54 Aligned_cols=50 Identities=18% Similarity=0.303 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhh
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLI 201 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~ 201 (256)
+...+++..+++|+|. ....+.+++.-..+ ++-|..+|+-.+-.+++.+.
T Consensus 96 ~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~-~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGL---LGISYGILSASWDP-EREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHHH---HhhhhhhcccccCC-CCCCCcccHHHHHHhHHHHH
Confidence 3444444455555443 22334445555554 67899999988877776553
No 300
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=71.59 E-value=66 Score=29.94 Aligned_cols=52 Identities=6% Similarity=0.025 Sum_probs=31.3
Q ss_pred HHhhhh----cCchhHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHhhhhchhh
Q psy11010 117 GILTHR----VGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSSCSSV 168 (256)
Q Consensus 117 g~l~dr----~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~ 168 (256)
+-++|. -||.+-++++.+++.++.+...+. +..+.+..+.++.+++.++...
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 455663 356666777777777777766554 4455555566666665554433
No 301
>PRK11469 hypothetical protein; Provisional
Probab=69.91 E-value=45 Score=25.18 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhh-HHHHhhhhcCchhHHHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANP-LVGILTHRVGYSLPMFTGFVIM 136 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~G~r~~l~~~~~~~ 136 (256)
..+....+.++..++.+....-..+ .|.+.-.......+..+....... ++.++.+++|+|.-++-|.++.
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~--------~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI 175 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAF--------LQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLI 175 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH--------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666777777766665543333 223333344444444444444444 4445667788888888888888
Q ss_pred HHHHHHH
Q psy11010 137 FLSTLIF 143 (256)
Q Consensus 137 ~~~~~~~ 143 (256)
.++.-..
T Consensus 176 ~iGi~il 182 (188)
T PRK11469 176 GIGVQIL 182 (188)
T ss_pred HHHHHHH
Confidence 8876544
No 302
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=68.90 E-value=79 Score=27.58 Aligned_cols=117 Identities=16% Similarity=0.083 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
....+.+-..+..++... ..|......++++.++...+.+.-.+...++.++.-.-..++|-|-....+.-...++.
T Consensus 17 ~~~~lglQH~lamfg~~V---~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p 93 (451)
T COG2233 17 KLLLLGLQHLLAMFGATV---LVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAP 93 (451)
T ss_pred HHHHHHHHHHHHHHhcch---HhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHH
Confidence 344444444444444333 23445677899999999999999999999988886653334555555544444444444
Q ss_pred HHHHhh---chHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 141 LIFAFG---RTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 141 ~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
...... ......+.+.+..|+..-...+.....+...+||
T Consensus 94 ~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPP 136 (451)
T COG2233 94 MIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPP 136 (451)
T ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 433322 2244444445555554433333322256666665
No 303
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=67.72 E-value=65 Score=26.16 Aligned_cols=58 Identities=16% Similarity=0.301 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhc
Q psy11010 152 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 212 (256)
Q Consensus 152 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~ 212 (256)
.-..|.+.|+-.-.. .+.++++.-.||+ +++--..--...+.+++.++.|++ |.+.+.
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~-~~~l~~~er~~ls~glSi~~~~~~-g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPR-KHDLDGIERLALSVGLSIAIVPLI-GLLLNY 79 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccC-cCCCcHHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 345677777765434 4458999999986 444322322334444444555555 444443
No 304
>KOG4830|consensus
Probab=65.97 E-value=7.4 Score=31.21 Aligned_cols=64 Identities=9% Similarity=0.135 Sum_probs=44.8
Q ss_pred HHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHh---------hhhcCchhHH
Q psy11010 65 VAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGIL---------THRVGYSLPM 129 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~G~r~~l 129 (256)
.....+++-...+.....+..++ ++.|.++...+.++-...+..++..++.|.. .||+|||+..
T Consensus 22 yGvGHmlNDitAScWFTYlllfl-tqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFL-TQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHH-HHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 34445555455555555555554 5578888888888888889889988888643 5799998764
No 305
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=64.94 E-value=44 Score=30.78 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhh
Q psy11010 148 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 208 (256)
Q Consensus 148 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~ 208 (256)
+.++.+.-.++.++|.........=+..+..|+ +.+....+++.+..++|.++...+...
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~-~mks~~~a~~~~~~~~g~~~~~~~~~~ 623 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPP-NMKSVLQALWLLTVAIGNLIVVVIAEF 623 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555666778888888777777788888897 999999999999999999887666543
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.82 E-value=39 Score=24.57 Aligned_cols=32 Identities=16% Similarity=-0.034 Sum_probs=26.6
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCch
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYS 126 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r 126 (256)
+.++.++.+...++..+..+-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 45778888888888889999999999888754
No 307
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=62.76 E-value=79 Score=25.38 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhhhHHHHhhh-hcCchhHHHH----HHHHHHHHHHHHHh-h----chHHHHHHHHHHHHhhhhchhhh
Q psy11010 100 VMFGSKAFVQLLANPLVGILTH-RVGYSLPMFT----GFVIMFLSTLIFAF-G----RTYGVLFLARSLQGIGSSCSSVS 169 (256)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~l~~----~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~G~~~g~~~~~ 169 (256)
....++..+..++....|.++. ++.||+.+.. +.++.++..+.... . .+...+++.-++.|++.=+..+.
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3344455555566666777765 3455555432 23333333333211 1 13556777777888776666666
Q ss_pred hhhhhhhc
Q psy11010 170 GMGMLAER 177 (256)
Q Consensus 170 ~~~~~~~~ 177 (256)
...+-.|.
T Consensus 225 iL~lPhEy 232 (267)
T PF07672_consen 225 ILNLPHEY 232 (267)
T ss_pred HhcChhhh
Confidence 55555554
No 308
>KOG2765|consensus
Probab=62.38 E-value=63 Score=27.35 Aligned_cols=59 Identities=15% Similarity=0.036 Sum_probs=30.0
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHhhc------hHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 120 THRVGYSLPMFTGFVIMFLSTLIFAFGR------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 120 ~dr~G~r~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
.||+.-.|++.+..- ..|.++..... ....-....-+.++..+..+.....++..-.++
T Consensus 208 ~e~ft~sKllav~~s--i~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~ 272 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVS--IAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGD 272 (416)
T ss_pred cchhhHHHHHHHHHh--hccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 899998888765433 33333332221 122212222334444555666666666666654
No 309
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=59.81 E-value=68 Score=26.90 Aligned_cols=73 Identities=11% Similarity=0.078 Sum_probs=49.6
Q ss_pred HhHhhhchhhhHHHHHhhhcCc-chh----HHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh
Q psy11010 73 NMLLTTVEDVARENRHKYLMGE-TKA----VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~-~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~ 145 (256)
..+.+.+=|-..++..++++-+ +.+ ..+.....++|..++....+++.|++|....+.+..+.+.++.+.+..
T Consensus 44 a~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 44 AVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 3444445555566666666544 333 346667777777777778899999999888888888888877776654
No 310
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=59.43 E-value=74 Score=25.31 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 188 MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 188 ~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
......+..+|..+| ++.|.+.|+.|.+....+.++..+++-...+...
T Consensus 39 l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 39 LNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred HHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666676665 6667777877766666666666666555555443
No 311
>PLN02776 prenyltransferase
Probab=57.60 E-value=1.1e+02 Score=25.56 Aligned_cols=20 Identities=10% Similarity=0.105 Sum_probs=10.7
Q ss_pred hhHHHHHHHHHHHHHHHHHh
Q psy11010 126 SLPMFTGFVIMFLSTLIFAF 145 (256)
Q Consensus 126 r~~l~~~~~~~~~~~~~~~~ 145 (256)
+..+..+.++..++..+..+
T Consensus 76 ~~A~~~~~~l~~~g~~~l~~ 95 (341)
T PLN02776 76 PHAVAWAVVVGAAGVALLAY 95 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666544443
No 312
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=55.92 E-value=64 Score=24.34 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhhHHHHhhhhcCc
Q psy11010 102 FGSKAFVQLLANPLVGILTHRVGY 125 (256)
Q Consensus 102 ~~~~~~~~~~~~~~~g~l~dr~G~ 125 (256)
..-|.+++.+...+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 345667888899999999999875
No 313
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.13 E-value=64 Score=21.89 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=20.8
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHhhhhhcc
Q psy11010 182 RERGNAMGIALGGLALGVLIGPPFGGIMYQFV 213 (256)
Q Consensus 182 ~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~ 213 (256)
+.++.+.++--..-.+++++-....||+.+++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777777755555555555555667887765
No 314
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=54.24 E-value=57 Score=21.06 Aligned_cols=65 Identities=17% Similarity=0.018 Sum_probs=36.2
Q ss_pred HhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 160 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 160 G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
|+|--...|..+.++.|.- --....|.....+.+|-.+|.+....+.++...+..+....+.+.+
T Consensus 5 GigRFayTplLP~M~~~~~----ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGG----LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred hhHHHHHHhHhHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3333334455555555542 1223356667777788888888888777665545444444444333
No 315
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=53.75 E-value=78 Score=22.86 Aligned_cols=26 Identities=27% Similarity=0.296 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhhHHHHhhhhcCchh
Q psy11010 102 FGSKAFVQLLANPLVGILTHRVGYSL 127 (256)
Q Consensus 102 ~~~~~~~~~~~~~~~g~l~dr~G~r~ 127 (256)
..-|.++..+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34567788888889999999988763
No 316
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=51.41 E-value=83 Score=22.10 Aligned_cols=23 Identities=9% Similarity=-0.153 Sum_probs=14.1
Q ss_pred HHHHhhhhchhhhhhhhhhhccc
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
.+.+.|.-+.++...++..|...
T Consensus 70 ~~l~tGf~GgfTTFSTf~~E~~~ 92 (128)
T PRK14199 70 LFLTTGIMGGLTTFSTFSYETIN 92 (128)
T ss_pred HHHHhHHhcccccHHHHHHHHHH
Confidence 34445555556667777777664
No 317
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=51.26 E-value=79 Score=21.83 Aligned_cols=24 Identities=13% Similarity=0.014 Sum_probs=15.4
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 62 ~~~l~tGf~GgfTTFSTf~~e~~~ 85 (118)
T PRK14214 62 QLFLGTGFMGGYTTFSTFKVESME 85 (118)
T ss_pred HHHHHHHHcccchhHHHHHHHHHH
Confidence 445555555667777777777764
No 318
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=49.59 E-value=86 Score=21.73 Aligned_cols=24 Identities=17% Similarity=0.044 Sum_probs=15.5
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 60 ~~~l~tGf~GgfTTFSTf~~e~~~ 83 (120)
T PRK14232 60 YLLLGDGFLGAYTTFSTFMYEGFN 83 (120)
T ss_pred HHHHHHHhcccchhHHHHHHHHHH
Confidence 344455555667777788888764
No 319
>PRK03612 spermidine synthase; Provisional
Probab=49.30 E-value=2e+02 Score=25.79 Aligned_cols=29 Identities=17% Similarity=0.138 Sum_probs=13.9
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcC
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVG 124 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G 124 (256)
..++..+...++|..++.-+.....+++.
T Consensus 54 ~ii~~fl~glalGs~l~~~~~~~~~~~~~ 82 (521)
T PRK03612 54 TVIGLMLFAMGVGALLSKYLLRDAAAGFV 82 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 34455555555555555444444444443
No 320
>COG2119 Predicted membrane protein [Function unknown]
Probab=47.97 E-value=1.2e+02 Score=22.91 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=26.2
Q ss_pred HHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 104 SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 104 ~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
...++..++-..+.++++|+..|++-..+.+++.+.
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~f 177 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 345566777777889999999998887765555443
No 321
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=47.50 E-value=2.6e+02 Score=26.64 Aligned_cols=14 Identities=14% Similarity=0.261 Sum_probs=6.4
Q ss_pred cCchHHHHHHHHHH
Q psy11010 213 VGKTAPFLILSALA 226 (256)
Q Consensus 213 ~g~~~~~~~~~~~~ 226 (256)
.+|..++++.++++
T Consensus 128 L~~~~ALLLGAILA 141 (810)
T TIGR00844 128 LNFPASLLMGACIT 141 (810)
T ss_pred CCHHHHHHHHhhhc
Confidence 44544444444443
No 322
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=47.23 E-value=2e+02 Score=25.31 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy11010 126 SLPMFTGFVIMFLSTLIFAFGRTYGVLF 153 (256)
Q Consensus 126 r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
|+......+.+.++.+..++..++....
T Consensus 341 ~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 341 KPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred chhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 3444455566777788888877765544
No 323
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=47.18 E-value=52 Score=18.55 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=13.0
Q ss_pred HHhhhhhHHhhhhhccCchHHHHHHHHHHHHHH
Q psy11010 198 GVLIGPPFGGIMYQFVGKTAPFLILSALALGDG 230 (256)
Q Consensus 198 g~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 230 (256)
|+++|..+.+.+-...++.+.-++.+++..+..
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiil 39 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIIL 39 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 334443333333222233444444444444433
No 324
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=47.05 E-value=99 Score=21.70 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=15.5
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
|.+.+.|.-+.++...++..|...
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~ 92 (127)
T PRK14200 69 RQIIGLGFLGALTTFSTFSMDNVL 92 (127)
T ss_pred HHHHHHHHhccchhHHHHHHHHHH
Confidence 445555656667777777777663
No 325
>PRK03818 putative transporter; Validated
Probab=46.06 E-value=2.3e+02 Score=25.64 Aligned_cols=80 Identities=15% Similarity=0.120 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
+.|+..-++.+|...+.-+..-+.+..|.+.. +.+.++..+..++.... ....-+-..+.+-.++.+...++..+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 45666666666666666665555554555444 34444444433333222 21111222233334555556677777777
Q ss_pred hc
Q psy11010 176 ER 177 (256)
Q Consensus 176 ~~ 177 (256)
|.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 75
No 326
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=45.91 E-value=93 Score=21.09 Aligned_cols=24 Identities=8% Similarity=-0.098 Sum_probs=15.5
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 334455555667777788888764
No 327
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=45.47 E-value=17 Score=28.39 Aligned_cols=109 Identities=18% Similarity=0.219 Sum_probs=57.0
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCc-----hhH---HHHHHHHHHHHHH-HHHhhchH--HHHHHHHH
Q psy11010 89 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-----SLP---MFTGFVIMFLSTL-IFAFGRTY--GVLFLARS 157 (256)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-----r~~---l~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 157 (256)
--+|+....+|...++.- -+=.+.++||||- |-+ +++|.++-.+..- +.++..+. ..=...-.
T Consensus 106 llLGlkREaIGat~SI~R------Ep~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAM 179 (241)
T PF11299_consen 106 LLLGLKREAIGATFSIGR------EPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAM 179 (241)
T ss_pred HHhcccHHhhcceeeccc------CcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHH
Confidence 346666666665444321 1225668899984 233 2344333332221 11211111 11123344
Q ss_pred HHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhH
Q psy11010 158 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 205 (256)
Q Consensus 158 l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i 205 (256)
-.|+|.|...++...-+.+.+|. ......++....+-+..+.|-.+
T Consensus 180 asGvGSgSMMaAa~~aL~~~~P~--~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 180 ASGVGSGSMMAAASGALAAAYPE--MADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HcCCcHHHHHHHHHHHHHHHCcc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899998888888888888874 55555555555444444444333
No 328
>KOG4830|consensus
Probab=45.31 E-value=47 Score=26.90 Aligned_cols=120 Identities=11% Similarity=0.066 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcC-chhH-HHHHHHHHH
Q psy11010 60 LVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-YSLP-MFTGFVIMF 137 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~-l~~~~~~~~ 137 (256)
..+.-+.+.+++.....+.-...++.+..++++.+.+..+++-.+..+.....+.+-.- ...-| |+|. .-.|.+++.
T Consensus 201 v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~e-ipwngkrlKayYsaGgiiwi 279 (412)
T KOG4830|consen 201 VQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSE-IPWNGKRLKAYYSAGGIIWI 279 (412)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhccc-CCcCcceeeeeeecccHHHH
Confidence 34445555566555555554555666667777777777777666655555444433111 11112 2333 344445444
Q ss_pred HHHHHHH-hhchHHH-HHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 138 LSTLIFA-FGRTYGV-LFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 138 ~~~~~~~-~~~~~~~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
.+....- .-++... +++..++.|+..+.......++.++...+
T Consensus 280 fcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~ 324 (412)
T KOG4830|consen 280 FCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINK 324 (412)
T ss_pred HhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4443332 2233332 34556778999998888877777777754
No 329
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=44.97 E-value=1.1e+02 Score=21.49 Aligned_cols=24 Identities=8% Similarity=-0.022 Sum_probs=15.8
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 67 ~~~l~tGf~GgfTTFSTf~~e~~~ 90 (127)
T PRK14206 67 RLFVMVGVCGGFTTFSSFSLQTLN 90 (127)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 445566666667777788888763
No 330
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=44.60 E-value=1e+02 Score=21.25 Aligned_cols=24 Identities=17% Similarity=0.012 Sum_probs=15.3
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 61 ~~~l~tGf~GgfTTFSTf~~e~~~ 84 (118)
T PRK14205 61 QLLLGTGFMGAFTTFSTFKLESVQ 84 (118)
T ss_pred HHHHHhhhccccccHHHHHHHHHH
Confidence 444555555667777778877764
No 331
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=43.70 E-value=32 Score=23.20 Aligned_cols=33 Identities=18% Similarity=0.002 Sum_probs=22.5
Q ss_pred hhhccCchHHHHHHHHHHHHHHhHhhheeecCC
Q psy11010 209 MYQFVGKTAPFLILSALALGDGCKCNYTIVQKS 241 (256)
Q Consensus 209 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (256)
-.+..+|+.+|++...++++.+.+.+...|+..
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 334567999998877777776666666666543
No 332
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=43.35 E-value=1.1e+02 Score=21.25 Aligned_cols=24 Identities=13% Similarity=-0.050 Sum_probs=14.8
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 64 ~~~l~tGf~GgfTTFSTf~~e~~~ 87 (122)
T PRK14228 64 ALLAGTAFVGAYTTFSTWMLETQR 87 (122)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHH
Confidence 344455555566777777777663
No 333
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=41.46 E-value=70 Score=18.40 Aligned_cols=33 Identities=12% Similarity=0.043 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhHHHHhhhh-cCchhHHHHHHHHH
Q psy11010 104 SKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIM 136 (256)
Q Consensus 104 ~~~~~~~~~~~~~g~l~dr-~G~r~~l~~~~~~~ 136 (256)
...+..++.....|+..|+ ++.++......++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444555566677888885 56655554443333
No 334
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=41.19 E-value=2.8e+02 Score=25.19 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
+.|+..-++.+|...+.-+..-+.. .|-+.. +.+.++..+..++..+.. ...-+-....+-.++.+...++..+.+.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 4677777777787777777776643 454443 445555544433332221 1111111222333445556666677777
Q ss_pred hcccC
Q psy11010 176 ERYPD 180 (256)
Q Consensus 176 ~~~~~ 180 (256)
|..+.
T Consensus 529 ~~~~~ 533 (562)
T TIGR03802 529 ERAGS 533 (562)
T ss_pred HhcCC
Confidence 77654
No 335
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=40.94 E-value=99 Score=19.99 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=25.2
Q ss_pred HhhhHHHHhhhhcCc-------hhHHHHHHHHHHHHHHHHHhhchH
Q psy11010 111 LANPLVGILTHRVGY-------SLPMFTGFVIMFLSTLIFAFGRTY 149 (256)
Q Consensus 111 ~~~~~~g~l~dr~G~-------r~~l~~~~~~~~~~~~~~~~~~~~ 149 (256)
.+.+..+++.+|..+ ++.+.++.++...+.++++..+|.
T Consensus 33 a~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 33 AASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 445556666666554 677777777777777777765543
No 336
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=40.53 E-value=79 Score=19.30 Aligned_cols=30 Identities=17% Similarity=0.069 Sum_probs=15.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhheeecCCCC
Q psy11010 214 GKTAPFLILSALALGDGCKCNYTIVQKSSS 243 (256)
Q Consensus 214 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (256)
||..++.+...+.+++.-.+-..+|++++.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 455555554444444444444556665543
No 337
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=40.17 E-value=1e+02 Score=20.03 Aligned_cols=52 Identities=12% Similarity=0.136 Sum_probs=28.4
Q ss_pred ccchHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHH
Q psy11010 56 ESRRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAF 107 (256)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 107 (256)
+.+++..+.+....+...+++.....+.|..+...........|++.++..+
T Consensus 12 r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~ 63 (91)
T PF04341_consen 12 RRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQI 63 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHH
Confidence 3444445555555555555665566667777665544224556666555444
No 338
>PRK11588 hypothetical protein; Provisional
Probab=40.16 E-value=2.7e+02 Score=24.84 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=19.0
Q ss_pred HHHhhhhcCchhHHH--HHHHHHHHHHHHHHhhchHHHH
Q psy11010 116 VGILTHRVGYSLPMF--TGFVIMFLSTLIFAFGRTYGVL 152 (256)
Q Consensus 116 ~g~l~dr~G~r~~l~--~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
.+++.+|++.|..++ +..+++.++....+++.+...+
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f 174 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAF 174 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 466778887664433 3334444444444555444333
No 339
>PRK10692 hypothetical protein; Provisional
Probab=39.19 E-value=89 Score=20.19 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=10.6
Q ss_pred chhHHHHHHHHHHHHHHHH
Q psy11010 125 YSLPMFTGFVIMFLSTLIF 143 (256)
Q Consensus 125 ~r~~l~~~~~~~~~~~~~~ 143 (256)
||...++|-++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5555566666665555443
No 340
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=38.93 E-value=1.3e+02 Score=20.90 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=15.3
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 66 ~l~l~tGf~GgfTTFSTf~~E~~~ 89 (124)
T PRK14227 66 RLFVAVGFCGSFTTFSSFTYETIA 89 (124)
T ss_pred HHHHHhhHhcccccHHHHHHHHHH
Confidence 344455555667777788887764
No 341
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=38.86 E-value=1.3e+02 Score=20.91 Aligned_cols=24 Identities=8% Similarity=-0.108 Sum_probs=15.6
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 66 ~~~l~tGf~GgfTTFSTf~~e~~~ 89 (125)
T PRK14195 66 RLFLIVGVLGGFTTFSAFSLDAAL 89 (125)
T ss_pred HHHHHhHhccCcccHHHHHHHHHH
Confidence 444556666667777778877764
No 342
>PRK14222 camphor resistance protein CrcB; Provisional
Probab=38.10 E-value=1.4e+02 Score=20.81 Aligned_cols=24 Identities=17% Similarity=-0.046 Sum_probs=15.8
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 66 ~~~l~tGf~GgfTTFSTf~~E~~~ 89 (124)
T PRK14222 66 RIGLTIGFLGGLTTFSTFSYETFR 89 (124)
T ss_pred HHHHHHHHcccchhHHHHHHHHHH
Confidence 344555666667777788888763
No 343
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=37.52 E-value=2.7e+02 Score=24.02 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=55.1
Q ss_pred HHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHH-HHhhchHHHHHHHHHHHHhh
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI-FAFGRTYGVLFLARSLQGIG 162 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~ 162 (256)
|..+.... .++++...+.+...+...++.++-+....+.-+-+..+ +.....++... .....++...+.+.++.|+.
T Consensus 26 p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~-G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~ 103 (415)
T TIGR00801 26 PLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYL-GSSFAFVSPMIAIGSGLGIPAIMGALIATGLV 103 (415)
T ss_pred HHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeee-cCcHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 33445566 88899999999999999999999887776541112222 21111122211 11222334444444445544
Q ss_pred hhchhhh----hhhhhhhcccCcchhhHH
Q psy11010 163 SSCSSVS----GMGMLAERYPDDRERGNA 187 (256)
Q Consensus 163 ~g~~~~~----~~~~~~~~~~~~~~r~~~ 187 (256)
....... ...++.+.+|+ .-.+..
T Consensus 104 ~~ll~~~~~~~~~~~i~~~~Pp-~v~g~i 131 (415)
T TIGR00801 104 YTLLSLLIKKLGPRWLMKLFPP-VVTGPV 131 (415)
T ss_pred HHHHHHHHHHhhHHHHHhcCCc-hhHHHh
Confidence 4333221 22355778887 777653
No 344
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.51 E-value=1.9e+02 Score=23.14 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=7.6
Q ss_pred cCcchhHHHHHHHHHHH
Q psy11010 92 MGETKAVGVMFGSKAFV 108 (256)
Q Consensus 92 g~~~~~~~~~~~~~~~~ 108 (256)
+.+......+.+-+.-.
T Consensus 214 ~as~~~ldYvFs~f~GI 230 (254)
T PF07857_consen 214 GASQNGLDYVFSHFSGI 230 (254)
T ss_pred CCCCcchheeHHHHhhH
Confidence 33444454455444333
No 345
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=37.05 E-value=2.7e+02 Score=23.87 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=57.9
Q ss_pred HHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHH-hhchHHHHHHHHHHHHhh
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA-FGRTYGVLFLARSLQGIG 162 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~ 162 (256)
|..+.+..|.++++...+.+...++..++.++..+-.-++|.|..+..+.....+...... ....+...+.+.++.|+-
T Consensus 16 p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii 95 (406)
T TIGR03173 16 PLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLF 95 (406)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 3344556689988888888888888888888864322256766666544433333322221 122344444444555544
Q ss_pred hhchhhhhhhhhhhcccCcchhhHH
Q psy11010 163 SSCSSVSGMGMLAERYPDDRERGNA 187 (256)
Q Consensus 163 ~g~~~~~~~~~~~~~~~~~~~r~~~ 187 (256)
.-... .....+.+.+|+ ...|..
T Consensus 96 ~illg-~~~~~l~~~iPp-~v~G~~ 118 (406)
T TIGR03173 96 VILLA-PFFSKLVRFFPP-VVTGTV 118 (406)
T ss_pred HHHHH-HHHHHHHHHCCc-HHHHHH
Confidence 33332 245567788887 665543
No 346
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=36.35 E-value=2.1e+02 Score=22.76 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=17.7
Q ss_pred hhchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 145 FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 145 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
++.|..-++.+....|+...... ..-..+...|+
T Consensus 30 LS~s~~FyY~sg~~lGv~~s~li--~~~~~~k~lPr 63 (249)
T PF10225_consen 30 LSRSVLFYYSSGISLGVLASLLI--LLFQLSKLLPR 63 (249)
T ss_pred hccChhHHHhhhHHHHHHHHHHH--HHHHHHHHccC
Confidence 34555555555555555433222 23456777774
No 347
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=35.29 E-value=1.6e+02 Score=20.76 Aligned_cols=24 Identities=17% Similarity=-0.079 Sum_probs=15.5
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 65 ~~~l~tGf~GgfTTFSTf~~E~~~ 88 (132)
T PRK14219 65 ITGIGTGFIGSFTTFSTFSVETIQ 88 (132)
T ss_pred HHHHHHHHccchhhHHHHHHHHHH
Confidence 444455555667777788887763
No 348
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=35.17 E-value=44 Score=22.45 Aligned_cols=46 Identities=15% Similarity=0.057 Sum_probs=33.2
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
....|-....+.-.+++.++.+++..|+.-+-+-=..|..+..++.
T Consensus 54 ~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~ 99 (109)
T COG1742 54 AAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGV 99 (109)
T ss_pred chhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhce
Confidence 3457788888999999999999999998765554455544444443
No 349
>KOG3097|consensus
Probab=34.20 E-value=1.9e+02 Score=24.47 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=36.4
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
-..++..+..+.++..+.+...|.|+.++||-..+..+-+.-.
T Consensus 309 v~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l 351 (390)
T KOG3097|consen 309 VSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHL 351 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHH
Confidence 3568999999999999999999999999999988877655433
No 350
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=33.65 E-value=2e+02 Score=24.54 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=38.9
Q ss_pred HHHHHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh------hchHHHHHHHHH
Q psy11010 84 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF------GRTYGVLFLARS 157 (256)
Q Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 157 (256)
|..+.+..|. ..+...+.+...+...++.++.+. +.|.|..+.-+.....+....... ..++.....+.+
T Consensus 22 P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 97 (389)
T PF00860_consen 22 PLILAAAFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVL 97 (389)
T ss_dssp HHTTTS------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHH
T ss_pred HHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHH
Confidence 3344455566 445557777788888888888777 566666665444333333222211 123333444444
Q ss_pred HHHhhhhchhhhh-hhhhhhcccCcchhhHH
Q psy11010 158 LQGIGSSCSSVSG-MGMLAERYPDDRERGNA 187 (256)
Q Consensus 158 l~G~~~g~~~~~~-~~~~~~~~~~~~~r~~~ 187 (256)
+.|+..-...... ...+.+++|+ ..++..
T Consensus 98 i~gi~~~~l~~~g~~~~l~~~~pp-~v~g~v 127 (389)
T PF00860_consen 98 ISGILFILLGLTGLRKRLRRLFPP-VVKGAV 127 (389)
T ss_dssp HHHHHHHHHHTT-SH-HHHHH--H-HHHHHH
T ss_pred HHHHHHHHHHHhchHHHHHHHhCh-hheEee
Confidence 4444333222221 2256666765 555443
No 351
>COG3619 Predicted membrane protein [Function unknown]
Probab=33.24 E-value=2.4e+02 Score=22.13 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=17.7
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHhhhhcCc
Q psy11010 95 TKAVGVMFGSKAFVQLLANPLVGILTHRVGY 125 (256)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~ 125 (256)
+...........+..+++......+..|..+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455556666666666665555555555443
No 352
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=33.18 E-value=75 Score=16.35 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=13.2
Q ss_pred HHHHHHHHHhhhHHHHhhhh
Q psy11010 103 GSKAFVQLLANPLVGILTHR 122 (256)
Q Consensus 103 ~~~~~~~~~~~~~~g~l~dr 122 (256)
....+..++.+.+.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34556666777777877655
No 353
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=33.14 E-value=3.6e+02 Score=24.10 Aligned_cols=78 Identities=18% Similarity=0.023 Sum_probs=55.8
Q ss_pred HHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHH-HhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhh
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG-VLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg-~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
...|++.......--+-+.+.+|..+++...+|-++...++- .++.-.+++-+.+..||-..-.+.-++.++..++.+
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666777888886567888888887777666 566677778888999998887777666666654443
No 354
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=32.41 E-value=1.6e+02 Score=19.94 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=38.9
Q ss_pred hhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhhhcc
Q psy11010 112 ANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 112 ~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
..-..-+.+|.|.|+...+...+...+++.+++.+- +.+.=.+--...|+|..........+-.|-.
T Consensus 16 ~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l 83 (106)
T COG2076 16 VGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL 83 (106)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 334456778888888888877777777777776653 2222233334456655544444444444443
No 355
>PRK14234 camphor resistance protein CrcB; Provisional
Probab=32.13 E-value=1.8e+02 Score=20.29 Aligned_cols=24 Identities=8% Similarity=-0.114 Sum_probs=15.8
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
|.+.+.|.-+.++...++..|.+.
T Consensus 67 ~~~l~tGf~GgfTTFSTf~~e~~~ 90 (124)
T PRK14234 67 RAGLIVGFLGGLTTFSSFSLDTLR 90 (124)
T ss_pred HHHHHHHHccccchHHHHHHHHHH
Confidence 445566666667777788887763
No 356
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=30.90 E-value=1.1e+02 Score=19.65 Aligned_cols=18 Identities=22% Similarity=0.287 Sum_probs=9.8
Q ss_pred chhHHHHHHHHHHHHHHH
Q psy11010 125 YSLPMFTGFVIMFLSTLI 142 (256)
Q Consensus 125 ~r~~l~~~~~~~~~~~~~ 142 (256)
||...++|-+++.++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 455555555555555443
No 357
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=30.23 E-value=1.7e+02 Score=22.96 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=31.7
Q ss_pred HHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy11010 107 FVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 158 (256)
Q Consensus 107 ~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (256)
++..++..+..++.||+.....-..|+....++.-...-.++...++++..+
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvl 64 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILSLVL 64 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 3555566666677777766666667777777776555555555554444443
No 358
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=29.53 E-value=2e+02 Score=20.15 Aligned_cols=24 Identities=8% Similarity=-0.112 Sum_probs=14.9
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 66 ~~~l~tGflGgfTTFSTf~~E~~~ 89 (128)
T PRK14212 66 KLMLTAGFLGAFTTFSTFSYETLD 89 (128)
T ss_pred HHHHHhhHhcCcccHHHHHHHHHH
Confidence 344455555566777777777653
No 359
>PRK14215 camphor resistance protein CrcB; Provisional
Probab=29.47 E-value=2e+02 Score=20.09 Aligned_cols=24 Identities=17% Similarity=-0.021 Sum_probs=15.0
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 66 ~~~l~tGf~GgfTTFSTf~~E~~~ 89 (126)
T PRK14215 66 RLMLVTGLLGGFTTFSTFGYESYS 89 (126)
T ss_pred HHHHHhHHhcccccHHHHHHHHHH
Confidence 444555555566777777777763
No 360
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=28.47 E-value=2.2e+02 Score=20.17 Aligned_cols=24 Identities=4% Similarity=-0.067 Sum_probs=15.1
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 70 ~~~l~tGf~GgfTTFSTf~~E~~~ 93 (133)
T PRK14233 70 HEFIMVGLLGGYTTVSSFCLQSVN 93 (133)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 344455555666777777777753
No 361
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=28.42 E-value=2.1e+02 Score=19.94 Aligned_cols=24 Identities=8% Similarity=-0.144 Sum_probs=14.6
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
|.+.+.|.-+.++...++..|...
T Consensus 65 ~~~l~tGflGgfTTFSTf~~e~~~ 88 (124)
T PRK14198 65 RLFLMTGILGGYTTFSAFSLDAAL 88 (124)
T ss_pred HHHHHHHHhcccccHHHHHHHHHH
Confidence 444455555556666777777653
No 362
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=28.40 E-value=3.7e+02 Score=22.86 Aligned_cols=48 Identities=15% Similarity=0.253 Sum_probs=26.5
Q ss_pred HhhhcCcchhHHHHHHHHHHHHH---HhhhHHHHhhhhcCchhHHHHHHHHHHH
Q psy11010 88 HKYLMGETKAVGVMFGSKAFVQL---LANPLVGILTHRVGYSLPMFTGFVIMFL 138 (256)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~g~l~dr~G~r~~l~~~~~~~~~ 138 (256)
.+++|.++.-.|.+.. .++.. +.+.- ....||..+---+..|..+..+
T Consensus 249 v~~~Glp~afiGvIIa--iv~~apE~~tAV~-aA~kNkmq~slnialGSsLq~i 299 (366)
T PRK10599 249 LTSMNAPVAFTGFLVA--LLILSPEGLGALK-AVLNNQVQRAMNLFFGSVLATI 299 (366)
T ss_pred HHhcCCCHHHHHHHHH--HHHcchhHHHHHH-HHHcCchHHHHHHHHHHHHHHH
Confidence 5779999999997763 33332 22222 2245666555444554444333
No 363
>COG4769 Predicted membrane protein [Function unknown]
Probab=28.38 E-value=1.1e+02 Score=22.54 Aligned_cols=49 Identities=20% Similarity=0.234 Sum_probs=27.8
Q ss_pred HHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q psy11010 106 AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 160 (256)
Q Consensus 106 ~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 160 (256)
.....+.+...-++..++|+|.+=.+|.-+ .-++.+|..++.+.+++.+
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~ 131 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVF 131 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHh
Confidence 334445556667788888987763333221 2234566666666665544
No 364
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=28.31 E-value=1.8e+02 Score=20.90 Aligned_cols=26 Identities=15% Similarity=-0.017 Sum_probs=19.3
Q ss_pred hhhhhcccCcchhhHHHHHHHHHHHHH
Q psy11010 172 GMLAERYPDDRERGNAMGIALGGLALG 198 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~~~~~~~lg 198 (256)
.-+.|++|+ ..|..+...++......
T Consensus 56 ~ALkDm~Pp-~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 56 YALKDIVPP-TTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHHhhCCH-HHHHHHHHHHHHHHHHH
Confidence 346799998 99988887776655443
No 365
>COG1971 Predicted membrane protein [Function unknown]
Probab=28.21 E-value=2.7e+02 Score=21.16 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHH-HHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHH
Q psy11010 59 RLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFG-SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 137 (256)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~ 137 (256)
+.....+.++..++......-..... .+......... +..+...++..++.++...+|.|.-++.|.++..
T Consensus 107 ~~~~~~laiatSidal~vG~~~a~lg--------v~i~~~av~iG~~T~il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~ 178 (190)
T COG1971 107 FKELILLAIATSIDALAVGVGLAFLG--------VNILLAAVAIGLITLILSALGAIIGRKLGKFLGKYAEILGGIILIG 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 55566677777666666555444322 11111122222 2333334444445555666677777777777777
Q ss_pred HHHHH
Q psy11010 138 LSTLI 142 (256)
Q Consensus 138 ~~~~~ 142 (256)
++.-.
T Consensus 179 ~G~~i 183 (190)
T COG1971 179 IGVKI 183 (190)
T ss_pred HHHHH
Confidence 76544
No 366
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=27.93 E-value=4.4e+02 Score=23.59 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhh
Q psy11010 98 VGVMFGSKAFVQLLANPLVGILTHR 122 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~g~l~dr 122 (256)
-|.+.+...+.+++.+.++|+.+-|
T Consensus 295 rg~l~t~~i~~y~~~~~iaGy~S~~ 319 (521)
T PF02990_consen 295 RGSLLTAAIILYALTSFIAGYVSAR 319 (521)
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHH
Confidence 3444444444444444444444443
No 367
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=27.79 E-value=51 Score=26.41 Aligned_cols=56 Identities=11% Similarity=-0.175 Sum_probs=34.8
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHhhh---h--hccCchHHHHHHHHHHHHHHhHhhhee
Q psy11010 182 RERGNAMGIALGGLALGVLIGPPFGGIM---Y--QFVGKTAPFLILSALALGDGCKCNYTI 237 (256)
Q Consensus 182 ~~r~~~~g~~~~~~~lg~~~g~~i~~~l---~--~~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (256)
++|+........+..+|+++.....-.- . -..+|++.+.+.+++.++-+++..++-
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifG 62 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFG 62 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566666666777777777653332111 1 123599999988888877666655543
No 368
>COG5547 Small integral membrane protein [Function unknown]
Probab=27.45 E-value=1.4e+02 Score=17.62 Aligned_cols=38 Identities=26% Similarity=0.455 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhhh
Q psy11010 127 LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS 164 (256)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 164 (256)
..++.+++...++.+++++.-=-..+.+...+.|++.|
T Consensus 9 ypIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 9 YPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555554444432111223333444555444
No 369
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=27.17 E-value=1.8e+02 Score=22.60 Aligned_cols=50 Identities=14% Similarity=0.076 Sum_probs=29.6
Q ss_pred HHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q psy11010 108 VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS 157 (256)
Q Consensus 108 ~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
+..++..+..++.||+..-..-..|+....++.-......+....+....
T Consensus 15 G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv 64 (228)
T COG1811 15 GGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLALV 64 (228)
T ss_pred HHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHH
Confidence 44455555556677765555556666666666666666666665544443
No 370
>PRK04972 putative transporter; Provisional
Probab=26.90 E-value=4.8e+02 Score=23.67 Aligned_cols=91 Identities=11% Similarity=0.044 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
+.|+..-+..+|...+.-+..-+.. .|-+.. ..+.++..+..+...+.. -..-+-..+.+-.++.+...++..+++.
T Consensus 446 ~~GL~lFla~vGl~aG~~f~~~~~~-~g~~~~-~~g~~~t~~~~~~~~~~~~~~~k~~~~~~~G~~aG~~t~~~~l~~~~ 523 (558)
T PRK04972 446 EFGLMVFMAGVGLSAGSGINNGLGA-VGGQML-IAGLIVSLVPVVICFLFGAYVLRMNRALLFGAIMGARTCAPAMEIIS 523 (558)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCCcHHHHHHH
Confidence 4555555555555555555554433 343333 344444433333222221 1111111233333445556667777777
Q ss_pred hcccCcchhhHHHHH
Q psy11010 176 ERYPDDRERGNAMGI 190 (256)
Q Consensus 176 ~~~~~~~~r~~~~g~ 190 (256)
|.... +.-..+.+.
T Consensus 524 ~~~~~-~~~~~gYa~ 537 (558)
T PRK04972 524 DTARS-NIPALGYAG 537 (558)
T ss_pred hhcCC-CCcccccHh
Confidence 77654 333333333
No 371
>PRK14208 camphor resistance protein CrcB; Provisional
Probab=26.80 E-value=2.3e+02 Score=19.84 Aligned_cols=24 Identities=13% Similarity=-0.010 Sum_probs=14.9
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
|.+.+.|.-+.++...++..|...
T Consensus 66 ~~~l~tGflGgfTTFSTf~~e~~~ 89 (126)
T PRK14208 66 RLFLAAGVMGGFTTYSSFNYETLA 89 (126)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHH
Confidence 444455555566777777777653
No 372
>PLN02601 beta-carotene hydroxylase
Probab=26.42 E-value=2.6e+02 Score=22.55 Aligned_cols=20 Identities=10% Similarity=0.057 Sum_probs=13.0
Q ss_pred HHHHHHHHhhhHHHHhhhhc
Q psy11010 104 SKAFVQLLANPLVGILTHRV 123 (256)
Q Consensus 104 ~~~~~~~~~~~~~g~l~dr~ 123 (256)
...++..++.=++.|++-|+
T Consensus 138 al~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 138 ALSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34466667777777777664
No 373
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=26.00 E-value=3.1e+02 Score=21.95 Aligned_cols=9 Identities=22% Similarity=0.601 Sum_probs=4.0
Q ss_pred chhhHHHHH
Q psy11010 182 RERGNAMGI 190 (256)
Q Consensus 182 ~~r~~~~g~ 190 (256)
+.-|.++|+
T Consensus 77 ~~iGLglg~ 85 (254)
T PF07857_consen 77 KTIGLGLGM 85 (254)
T ss_pred hhhhhHHHH
Confidence 444444443
No 374
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=25.92 E-value=3.8e+02 Score=22.19 Aligned_cols=60 Identities=12% Similarity=0.084 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHHHHHHHHHHHHHHhhhhhHHhhhhh
Q psy11010 150 GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 211 (256)
Q Consensus 150 ~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~lg~~~g~~i~~~l~~ 211 (256)
..+.++-++.|++.+...........|.+.. ..+...=++....+.|...||.++..+..
T Consensus 209 ~aF~isa~~AGiAGaL~a~~~~~v~p~~f~~--~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~~ 268 (314)
T COG4177 209 LAFVISAAIAGIAGALYALYLGFVSPESFSF--TLSIEVLAMVVLGGAGTLFGALLGAVLVV 268 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhceeChhhccH--HHHHHHHHHHHHcCccccHHHHHHHHHHH
Confidence 3455556666665444333333333333321 22222223344556678888888876553
No 375
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=25.28 E-value=1.5e+02 Score=17.39 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=19.5
Q ss_pred HHHhhhhhHHhhhhhccCchHHHHHHHHHHHHHHhHhh
Q psy11010 197 LGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGCKCN 234 (256)
Q Consensus 197 lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 234 (256)
+|..+|...+......+++.....+..++.++..++..
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 34444444433333345666666666666655544444
No 376
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=25.24 E-value=3.3e+02 Score=21.17 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=19.6
Q ss_pred HHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHH
Q psy11010 107 FVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 139 (256)
Q Consensus 107 ~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~ 139 (256)
+...+.-.+.|.+.-|+++++....++=...++
T Consensus 172 ~~~~~aL~~~G~~~a~~~~~~~~~~~l~~~~iG 204 (218)
T cd02432 172 IATLLALALTGYVSARLGGASVLRAILRNVIWG 204 (218)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 335555666777777777766665444333333
No 377
>PF12832 MFS_1_like: MFS_1 like family
Probab=24.61 E-value=1.9e+02 Score=18.07 Aligned_cols=38 Identities=26% Similarity=0.348 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHH
Q psy11010 186 NAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILS 223 (256)
Q Consensus 186 ~~~g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~ 223 (256)
.-.|+......+-.++++++.|.+.|..+-+-......
T Consensus 35 ~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 35 SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 44566666667778889999999999988665554433
No 378
>PRK14225 camphor resistance protein CrcB; Provisional
Probab=24.60 E-value=2.6e+02 Score=19.86 Aligned_cols=24 Identities=13% Similarity=0.001 Sum_probs=15.0
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 77 ~~~l~tGflGgfTTFSTfs~E~~~ 100 (137)
T PRK14225 77 RQFVMGGLCGGLTTFSSMSLDTFL 100 (137)
T ss_pred HHHHHHHHhchhccHHHHHHHHHH
Confidence 444555555666777777777653
No 379
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.37 E-value=2.3e+02 Score=19.01 Aligned_cols=18 Identities=22% Similarity=0.196 Sum_probs=8.5
Q ss_pred hhhHHHHhhhh-cCchhHH
Q psy11010 112 ANPLVGILTHR-VGYSLPM 129 (256)
Q Consensus 112 ~~~~~g~l~dr-~G~r~~l 129 (256)
...+.|++.|+ ++-++.+
T Consensus 58 ~G~~lG~WLD~~~~t~~~~ 76 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSW 76 (100)
T ss_pred HHHHHHHHHHhhcCCCcHH
Confidence 34445555664 4444433
No 380
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=24.15 E-value=3e+02 Score=20.38 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhhhhchhhhhhhhh
Q psy11010 96 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT-YGVLFLARSLQGIGSSCSSVSGMGML 174 (256)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~ 174 (256)
.+.++..-++.++...+.-+..-+.+. |-| .+..+.++..+..+....... ..-+-.....-.+..+...++.....
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLK-LLLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHH
Confidence 357888888888888888887777666 544 445555555555444433221 11111122222233444566677778
Q ss_pred hhccc
Q psy11010 175 AERYP 179 (256)
Q Consensus 175 ~~~~~ 179 (256)
.|...
T Consensus 134 ~~~~~ 138 (169)
T PF06826_consen 134 QEAIS 138 (169)
T ss_pred HHhhh
Confidence 88743
No 381
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins.; GO: 0016021 integral to membrane
Probab=24.06 E-value=3.2e+02 Score=22.52 Aligned_cols=21 Identities=14% Similarity=0.157 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHH
Q psy11010 186 NAMGIALGGLALGVLIGPPFG 206 (256)
Q Consensus 186 ~~~g~~~~~~~lg~~~g~~i~ 206 (256)
.+.+.......+..++-|.++
T Consensus 146 ~ava~V~lfg~vam~~~P~l~ 166 (305)
T PF03601_consen 146 YAVATVFLFGTVAMFLYPLLG 166 (305)
T ss_pred eeehHHHHHHHHHHHHHHHHH
Confidence 333334444444444444443
No 382
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=24.05 E-value=3.2e+02 Score=20.56 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=30.7
Q ss_pred hhhhhhhhhhhcccCcchhhHHH--HHHHHHHHHHHhhhhhHHhhhhhccCchHHHHHHHHHHHH
Q psy11010 166 SSVSGMGMLAERYPDDRERGNAM--GIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 228 (256)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~r~~~~--g~~~~~~~lg~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 228 (256)
-+....+.+.+..|+ ++|.++. |+.. ..+-..+.-..+.++.+. |.+..++.++..+.
T Consensus 13 DN~~vi~~~~~~lp~-~~r~kal~~Gi~~--A~~lR~~~i~~~~~ll~~--~~~i~~igG~~Ll~ 72 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPP-EQRRKALFWGIIG--AIVLRIIFIFLASWLLSI--FPWILLIGGLFLLY 72 (183)
T ss_pred hHHHHHHHHHhCCCH-HHhhhhHHHhHHH--HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 344455667777887 6665554 4442 223344444566677665 34555555544333
No 383
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=23.80 E-value=2.5e+02 Score=19.38 Aligned_cols=24 Identities=21% Similarity=0.012 Sum_probs=15.1
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|.+.
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHHH
Confidence 444455555666777777777663
No 384
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.51 E-value=1.8e+02 Score=17.58 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
+..+.......++..+..... ..+++|..+.
T Consensus 28 it~F~~n~~~g~i~i~I~l~l-~G~isE~i~~ 58 (63)
T PF06341_consen 28 ITAFLINQIAGLISIGITLFL-AGLISEFISK 58 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 333333333334444433332 4667777764
No 385
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=23.42 E-value=1.2e+02 Score=19.37 Aligned_cols=33 Identities=12% Similarity=-0.015 Sum_probs=19.2
Q ss_pred hhHHhhhh--hccCchHHHHHHHHHHHHHHhHhhh
Q psy11010 203 PPFGGIMY--QFVGKTAPFLILSALALGDGCKCNY 235 (256)
Q Consensus 203 ~~i~~~l~--~~~g~~~~~~~~~~~~~~~~~~~~~ 235 (256)
+..+..+- .-.||...|++.+=-+++..+++.+
T Consensus 30 ~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi~ 64 (81)
T PF13937_consen 30 ILFADELNQITFGGFPLGFWFAAQGSIIVFVILIF 64 (81)
T ss_pred HHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHHH
Confidence 44444442 2357888888876666655554443
No 386
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=23.08 E-value=2.9e+02 Score=24.70 Aligned_cols=14 Identities=7% Similarity=0.069 Sum_probs=6.3
Q ss_pred HHHHHHHHhhhhch
Q psy11010 153 FLARSLQGIGSSCS 166 (256)
Q Consensus 153 ~~~~~l~G~~~g~~ 166 (256)
++..++.|+..|..
T Consensus 303 i~~y~~~~~iaGy~ 316 (521)
T PF02990_consen 303 IILYALTSFIAGYV 316 (521)
T ss_pred HHHHHHHhhHHHHH
Confidence 33444455444433
No 387
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.96 E-value=1.8e+02 Score=18.23 Aligned_cols=29 Identities=7% Similarity=-0.133 Sum_probs=19.4
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHhhch
Q psy11010 120 THRVGYSLPMFTGFVIMFLSTLIFAFGRT 148 (256)
Q Consensus 120 ~dr~G~r~~l~~~~~~~~~~~~~~~~~~~ 148 (256)
-|+-.|++.+.+...+-..++++..+...
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~ 39 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYR 39 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666777777777777776666665543
No 388
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=22.76 E-value=4.4e+02 Score=21.71 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=25.2
Q ss_pred HHhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhh---cCchhHHHHHHHHHHHHHH
Q psy11010 87 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR---VGYSLPMFTGFVIMFLSTL 141 (256)
Q Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~G~r~~l~~~~~~~~~~~~ 141 (256)
+.+..+......++..+..... +..+-.++ ||.||.=+++....++..+
T Consensus 51 LADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa~~nav~Li 102 (296)
T COG1230 51 LADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAAFLNALLLI 102 (296)
T ss_pred HHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHHHHHHHHHH
Confidence 4566666555555554443332 23333333 6777766555554444443
No 389
>KOG2927|consensus
Probab=22.58 E-value=1e+02 Score=25.72 Aligned_cols=22 Identities=9% Similarity=0.045 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhhhhhHHhhh
Q psy11010 188 MGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 188 ~g~~~~~~~lg~~~g~~i~~~l 209 (256)
.|+++.+.+.|++++.++.-.+
T Consensus 216 ~gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 216 QGVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred cceeeeecchhHHHHHHHHHHH
Confidence 4555555555555554444443
No 390
>PRK14216 camphor resistance protein CrcB; Provisional
Probab=22.48 E-value=2.9e+02 Score=19.51 Aligned_cols=22 Identities=23% Similarity=0.139 Sum_probs=13.0
Q ss_pred HHHHhhhhchhhhhhhhhhhcc
Q psy11010 157 SLQGIGSSCSSVSGMGMLAERY 178 (256)
Q Consensus 157 ~l~G~~~g~~~~~~~~~~~~~~ 178 (256)
.+.+.|.-+.++...++..|.+
T Consensus 71 ~~l~tGf~GgfTTFSTf~~E~~ 92 (132)
T PRK14216 71 PLLGTGLCGGLTTFSTMQVETI 92 (132)
T ss_pred HHHHhhhhccccchHHHHHHHH
Confidence 3344555555666667777765
No 391
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain. This model represents a domain that is duplicated the aspartate-alanine antiporter AspT, as well as HI0035 of Haemophilus influenzae, YidE and YbjL of E. coli, and a number of other known or putative transporters. Member proteins may have 0, 1, or 2 copies of TrkA potassium uptake domain pfam02080 between the duplications. The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=22.37 E-value=3.2e+02 Score=19.93 Aligned_cols=82 Identities=12% Similarity=0.040 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHhhhhchhhhhhhhhh
Q psy11010 97 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-GRTYGVLFLARSLQGIGSSCSSVSGMGMLA 175 (256)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 175 (256)
+.|+..-++.++.-.+.-+..-+...-|-++.. .+.++..+..++..+ .....-+-.....-.++.+...++....+.
T Consensus 57 ~~GL~lFl~~vGl~aG~~f~~~l~~~gg~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aGa~T~tpaL~aa~ 135 (154)
T TIGR01625 57 EFGLMLFLYGVGLSAGPGFFSSLKDGGGLLRIN-GGALITVVPTLLVAVALIKLLRINYALTAGMLAGATTNTPALDAAN 135 (154)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhccccChHHHHHHH
Confidence 578888888888888877777665533334433 333333222222221 111111111122222334445666667777
Q ss_pred hccc
Q psy11010 176 ERYP 179 (256)
Q Consensus 176 ~~~~ 179 (256)
|...
T Consensus 136 ~~~~ 139 (154)
T TIGR01625 136 DTLR 139 (154)
T ss_pred HHhc
Confidence 7654
No 392
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=22.06 E-value=3.7e+02 Score=20.62 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHHHHHhHhhhchhhhHHHHHhhhcCcchhHHHHHHHHHHHHHHhhh-HHHHhhhh--cCchhHHHHHHH
Q psy11010 58 RRLVLVIVAIALVLDNMLLTTVEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANP-LVGILTHR--VGYSLPMFTGFV 134 (256)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr--~G~r~~l~~~~~ 134 (256)
..+....+.++..++.+....-..+ .|.+.-.......+..+....... ++.++.++ .|++. ++-|.+
T Consensus 127 ~~~e~l~L~iAlSiDalavG~s~~~--------~g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGli 197 (206)
T TIGR02840 127 SGKEALLLGIALSLDAFGAGIGASL--------LGLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGIL 197 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH--------hCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHH
Confidence 3455666666666666655543322 233433344444444444443333 33344555 46666 777777
Q ss_pred HHHHHH
Q psy11010 135 IMFLST 140 (256)
Q Consensus 135 ~~~~~~ 140 (256)
+..++.
T Consensus 198 LI~iG~ 203 (206)
T TIGR02840 198 LILLGV 203 (206)
T ss_pred HHHHHH
Confidence 766653
No 393
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=21.75 E-value=3.1e+02 Score=19.60 Aligned_cols=27 Identities=11% Similarity=-0.037 Sum_probs=19.6
Q ss_pred hhhhhcccCcchhhHHHHHHHHHHHHHH
Q psy11010 172 GMLAERYPDDRERGNAMGIALGGLALGV 199 (256)
Q Consensus 172 ~~~~~~~~~~~~r~~~~g~~~~~~~lg~ 199 (256)
.-+.|++|+ ..|....+.++.......
T Consensus 58 ~aLkdi~P~-~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 58 WALKDIFPP-SVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HHHhccCCH-HHHHHHHHHHHHHHHHHH
Confidence 346799998 999888888766554433
No 394
>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism]
Probab=21.55 E-value=3.6e+02 Score=20.61 Aligned_cols=32 Identities=3% Similarity=-0.209 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhHhhhchhhhHHHHHhhhc
Q psy11010 61 VLVIVAIALVLDNMLLTTVEDVARENRHKYLM 92 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 92 (256)
.+.-..+....+--....+..++|+++..+.+
T Consensus 113 ~f~~G~~~~l~NPK~~lf~la~~pqfv~~~~~ 144 (208)
T COG1280 113 AFRRGLLVNLLNPKAILFFLAFLPQFVDPGAG 144 (208)
T ss_pred HHHHHHHHHhhCcHHHHHHHHHHhhhcCCCCc
Confidence 34444455555544555555666776654433
No 395
>KOG2881|consensus
Probab=21.30 E-value=1.3e+02 Score=24.12 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=24.3
Q ss_pred HHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHHHH
Q psy11010 105 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI 142 (256)
Q Consensus 105 ~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~~ 142 (256)
..++..+.-+-+-.++.|+.-|++.+.|.+++.+..+.
T Consensus 249 H~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~ 286 (294)
T KOG2881|consen 249 HALCTGLAVIGGKYLASKISVRTVTLIGGILFIIFGLV 286 (294)
T ss_pred HHHHHHHHHhhhHHHhhhheeEEEEEecchhHHHHHHH
Confidence 33444444444556788999888888877666655433
No 396
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=21.20 E-value=4.8e+02 Score=21.58 Aligned_cols=95 Identities=16% Similarity=0.108 Sum_probs=56.1
Q ss_pred HHhhhHHHHhhhhcCchhHHHHHHHHHHHHHH-HHHh-hchHHHHHHHHHHHHhhhhchhhhhhhhhhhcccCcchhhHH
Q psy11010 110 LLANPLVGILTHRVGYSLPMFTGFVIMFLSTL-IFAF-GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNA 187 (256)
Q Consensus 110 ~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~~r~~~ 187 (256)
.+..-+++.+++|-|.-.+=+=|..+...... ...+ ..++|.= ++.+...|..+...+++++..... ++--..
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~g----l~~a~l~g~l~~ll~a~~ti~l~~-nqiisG 95 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLG----LLAAALVGALFGLLHAFLTIKLRA-NQIISG 95 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHH----HHHHHHHHHHHHHHHHHHHHhhcc-ccchhH
Confidence 34445577889998876654444433333222 1222 3344433 334444555666667777777766 677777
Q ss_pred HHHHHHHHHHHHhhhhhHHhhh
Q psy11010 188 MGIALGGLALGVLIGPPFGGIM 209 (256)
Q Consensus 188 ~g~~~~~~~lg~~~g~~i~~~l 209 (256)
.++.-.+.++..+++....+.-
T Consensus 96 ~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 96 LALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 7777777777777776666544
No 397
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=21.04 E-value=2.9e+02 Score=19.09 Aligned_cols=24 Identities=17% Similarity=0.039 Sum_probs=14.9
Q ss_pred HHHHHhhhhchhhhhhhhhhhccc
Q psy11010 156 RSLQGIGSSCSSVSGMGMLAERYP 179 (256)
Q Consensus 156 ~~l~G~~~g~~~~~~~~~~~~~~~ 179 (256)
+.+.+.|.-+.++...++..|...
T Consensus 62 ~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 62 YALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 444555555666777777777653
No 398
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=20.74 E-value=1.1e+02 Score=20.21 Aligned_cols=24 Identities=21% Similarity=0.106 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhhHHHHhhhhcCch
Q psy11010 103 GSKAFVQLLANPLVGILTHRVGYS 126 (256)
Q Consensus 103 ~~~~~~~~~~~~~~g~l~dr~G~r 126 (256)
........+.+.+.|.+.||..||
T Consensus 82 ~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 82 WITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 344455566778899999998775
No 399
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=20.74 E-value=3.9e+02 Score=20.38 Aligned_cols=28 Identities=7% Similarity=-0.002 Sum_probs=14.2
Q ss_pred hhhccCchHHHHHHHHHHHHHHhHhhhe
Q psy11010 209 MYQFVGKTAPFLILSALALGDGCKCNYT 236 (256)
Q Consensus 209 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
+....+.+...++..++++++.++.+++
T Consensus 170 lp~~inp~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 170 LPPVINPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred ccccCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 3334455555555555655555554443
No 400
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=20.65 E-value=3.9e+02 Score=20.93 Aligned_cols=50 Identities=18% Similarity=0.329 Sum_probs=33.5
Q ss_pred HhhhcCcchhHHHHHHHHHHHHHHhhhHHHHhhhhcCchhHHHHHHHHHHHHH
Q psy11010 88 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~~~~~~~~~~ 140 (256)
.+..+.+..+.|...+....... .....+.+|.+.++....|..+..+|.
T Consensus 123 a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 123 APSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 45567788888877766555544 556667778886666677766666654
No 401
>PF03911 Sec61_beta: Sec61beta family; InterPro: IPR005609 This family consists of Sec61 subunit beta and homologues like archaeal SecG. This subunit is a component of the Sec61/SecYEG protein secretory system.; PDB: 2WWA_C 2WW9_C 3BO0_C 3KCR_C 3BO1_C 2YXR_C 3DKN_C 2YXQ_C 1RH5_C 1RHZ_C ....
Probab=20.45 E-value=1.6e+02 Score=15.92 Aligned_cols=19 Identities=0% Similarity=0.123 Sum_probs=9.6
Q ss_pred hcCchhHHHHHHHHHHHHH
Q psy11010 122 RVGYSLPMFTGFVIMFLST 140 (256)
Q Consensus 122 r~G~r~~l~~~~~~~~~~~ 140 (256)
|.+++.++..+..+.+...
T Consensus 17 ki~P~~Vl~~si~fi~~V~ 35 (41)
T PF03911_consen 17 KIDPKTVLIISIAFIAIVI 35 (41)
T ss_dssp -BSCCHHHHHHHHHHHHHH
T ss_pred eeCCeehHHHHHHHHHHHH
Confidence 4556666665554444433
No 402
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.34 E-value=2.6e+02 Score=18.22 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhhhhchhhhhhhhhhhcccC
Q psy11010 149 YGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 180 (256)
Q Consensus 149 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 180 (256)
.+-++++|.+.|-+.+..-........|.-|.
T Consensus 31 t~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~pl 62 (89)
T PF04550_consen 31 TLRLFIGRVILGSAVSVVAGAALIQFPDLPPL 62 (89)
T ss_pred chhHHhHHHHHhhHHHHHHHHHHhcCCCCCHH
Confidence 34578888888888877777666666666654
No 403
>COG4239 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=20.29 E-value=4.9e+02 Score=21.30 Aligned_cols=49 Identities=16% Similarity=0.065 Sum_probs=29.6
Q ss_pred hhHHHHhhhhcCchhHHHHHHH--HHHHHHHHHHhhchHHHHHHHHHHHHh
Q psy11010 113 NPLVGILTHRVGYSLPMFTGFV--IMFLSTLIFAFGRTYGVLFLARSLQGI 161 (256)
Q Consensus 113 ~~~~g~l~dr~G~r~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~G~ 161 (256)
+-..|-..|-+|.|..=+++.+ +..+..+...+-+++++++....+.|-
T Consensus 165 qGyfgg~vdL~~QR~IEvws~mP~lyllii~as~~~p~f~~ll~i~llf~W 215 (341)
T COG4239 165 QGYFGGWVDLLGQRFIEVWSGMPTLYLLIILASIFQPNFWWLLGIMLLFGW 215 (341)
T ss_pred hhhhccchHHHHhhHHHHHhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 3345666788888877776643 333333344456777777666666554
No 404
>PF15192 TMEM213: TMEM213 family
Probab=20.18 E-value=89 Score=19.40 Aligned_cols=15 Identities=33% Similarity=0.330 Sum_probs=9.5
Q ss_pred hhhhhccCchHHHHH
Q psy11010 207 GIMYQFVGKTAPFLI 221 (256)
Q Consensus 207 ~~l~~~~g~~~~~~~ 221 (256)
||+....||..-|+.
T Consensus 46 GWIAAAVGWSLwFLT 60 (82)
T PF15192_consen 46 GWIAAAVGWSLWFLT 60 (82)
T ss_pred hHHHHHHhHHHHHHH
Confidence 566666777755544
Done!