RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11011
         (134 letters)



>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
           [TaxId: 9615]}
          Length = 377

 Score = 26.6 bits (57), Expect = 1.2
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 79  MVKKWQTLIEANVDVKTTDGYLLRLFCI--GFTHKDQLSQRKTCYAQH 124
           M+  W    E   +V T DGY+L +  I  G  + + + +R   + QH
Sbjct: 19  MITYWGYPAE-EYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQH 65


>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus
           [TaxId: 1280]}
          Length = 246

 Score = 23.7 bits (50), Expect = 9.0
 Identities = 7/53 (13%), Positives = 16/53 (30%)

Query: 61  NVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRLFCIGFTHKDQ 113
            ++TN+H          +++       +A  +   T         I  +   Q
Sbjct: 59  TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQ 111


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0648    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 436,967
Number of extensions: 17173
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 4
Length of query: 134
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 58
Effective length of database: 1,364,116
Effective search space: 79118728
Effective search space used: 79118728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (22.4 bits)