Query psy11015
Match_columns 360
No_of_seqs 365 out of 2428
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 16:00:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.6E-28 5.5E-33 223.9 26.8 206 152-358 97-325 (344)
2 2ynn_A Coatomer subunit beta'; 100.0 9.3E-29 3.2E-33 221.5 23.3 160 171-358 4-166 (304)
3 1vyh_C Platelet-activating fac 100.0 1.3E-28 4.4E-33 229.9 25.1 204 153-358 125-363 (410)
4 3ow8_A WD repeat-containing pr 100.0 2.2E-28 7.4E-33 220.9 24.9 163 168-358 152-315 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 6.3E-28 2.2E-32 219.5 24.4 164 167-358 171-337 (340)
6 3frx_A Guanine nucleotide-bind 100.0 2.4E-27 8.1E-32 213.8 27.3 179 151-358 33-221 (319)
7 3ow8_A WD repeat-containing pr 100.0 1.4E-27 4.8E-32 215.6 24.8 181 150-358 50-231 (321)
8 1vyh_C Platelet-activating fac 100.0 4.3E-28 1.5E-32 226.4 21.9 158 173-358 101-259 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 1.2E-26 4.2E-31 211.0 30.4 175 153-358 72-251 (340)
10 2hes_X YDR267CP; beta-propelle 100.0 3.2E-27 1.1E-31 214.0 26.1 184 151-358 27-224 (330)
11 2ynn_A Coatomer subunit beta'; 100.0 6.7E-27 2.3E-31 209.4 26.9 177 153-358 72-253 (304)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-27 1E-31 215.5 24.9 181 153-358 33-219 (345)
13 4ery_A WD repeat-containing pr 100.0 6.6E-27 2.3E-31 209.8 25.1 160 170-357 13-173 (312)
14 2pbi_B Guanine nucleotide-bind 100.0 1.1E-26 3.8E-31 212.6 26.4 164 167-358 183-351 (354)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-27 1.5E-31 214.4 22.7 163 169-357 4-174 (345)
16 2pm7_B Protein transport prote 100.0 9.1E-27 3.1E-31 207.8 24.0 182 151-358 24-232 (297)
17 2xzm_R RACK1; ribosome, transl 100.0 2.5E-26 8.6E-31 209.1 27.2 181 151-358 42-238 (343)
18 4g56_B MGC81050 protein; prote 100.0 7.1E-27 2.4E-31 214.1 22.9 203 155-358 112-337 (357)
19 2hes_X YDR267CP; beta-propelle 99.9 3.7E-26 1.3E-30 207.0 24.3 180 153-358 75-274 (330)
20 4ery_A WD repeat-containing pr 99.9 2.1E-25 7.3E-30 199.9 28.2 174 154-357 41-216 (312)
21 4aow_A Guanine nucleotide-bind 99.9 7.7E-26 2.6E-30 204.4 25.3 191 167-358 25-280 (340)
22 3frx_A Guanine nucleotide-bind 99.9 1.9E-25 6.4E-30 201.4 27.4 173 154-358 83-261 (319)
23 2pbi_B Guanine nucleotide-bind 99.9 2.6E-25 9E-30 203.4 28.0 177 152-358 80-265 (354)
24 1nr0_A Actin interacting prote 99.9 9.7E-26 3.3E-30 221.0 25.7 168 170-358 137-349 (611)
25 3iz6_a 40S ribosomal protein R 99.9 5.1E-26 1.7E-30 210.1 22.0 190 169-358 55-274 (380)
26 3bg1_A Protein SEC13 homolog; 99.9 9.2E-26 3.2E-30 203.1 22.7 208 151-358 28-287 (316)
27 2ymu_A WD-40 repeat protein; u 99.9 1.9E-25 6.3E-30 216.8 25.2 160 168-358 414-574 (577)
28 2pm7_B Protein transport prote 99.9 1.1E-25 3.9E-30 200.7 21.6 160 173-358 2-183 (297)
29 2xzm_R RACK1; ribosome, transl 99.9 2.8E-25 9.5E-30 202.2 24.2 160 170-358 11-197 (343)
30 3iz6_a 40S ribosomal protein R 99.9 8.4E-26 2.9E-30 208.7 20.9 171 167-358 187-369 (380)
31 2aq5_A Coronin-1A; WD40 repeat 99.9 1.5E-25 5.1E-30 208.3 22.2 172 153-352 52-238 (402)
32 3dm0_A Maltose-binding peripla 99.9 3.7E-25 1.3E-29 220.0 26.4 183 151-358 398-586 (694)
33 1nr0_A Actin interacting prote 99.9 4.5E-25 1.5E-29 216.3 25.8 203 154-358 166-391 (611)
34 4h5i_A Guanine nucleotide-exch 99.9 3.4E-25 1.2E-29 203.5 22.8 175 156-358 155-337 (365)
35 3mmy_A MRNA export factor; mRN 99.9 3.9E-25 1.3E-29 201.5 22.7 203 152-355 58-336 (368)
36 1erj_A Transcriptional repress 99.9 1.2E-24 4.1E-29 201.8 25.8 148 182-358 125-281 (393)
37 3f3f_A Nucleoporin SEH1; struc 99.9 1.1E-24 3.8E-29 196.4 24.6 207 152-358 27-331 (351)
38 1erj_A Transcriptional repress 99.9 1.6E-24 5.6E-29 200.9 26.2 180 154-357 141-334 (393)
39 4gqb_B Methylosome protein 50; 99.9 2.7E-25 9.3E-30 202.5 20.5 181 177-358 79-283 (344)
40 3dwl_C Actin-related protein 2 99.9 7.3E-26 2.5E-30 208.0 16.3 179 154-358 29-230 (377)
41 3dwl_C Actin-related protein 2 99.9 1.9E-25 6.4E-30 205.3 17.1 192 155-357 74-274 (377)
42 4e54_B DNA damage-binding prot 99.9 3.1E-25 1.1E-29 208.5 17.3 177 153-358 137-321 (435)
43 2j04_B YDR362CP, TAU91; beta p 99.9 2.2E-25 7.6E-30 213.7 16.4 157 173-358 259-422 (524)
44 2w18_A PALB2, fancn, partner a 99.9 1.5E-24 5E-29 193.2 20.4 165 168-358 166-351 (356)
45 2ymu_A WD-40 repeat protein; u 99.9 5E-24 1.7E-28 206.7 25.6 160 168-358 373-533 (577)
46 3jrp_A Fusion protein of prote 99.9 5.9E-24 2E-28 194.6 24.5 179 153-357 28-233 (379)
47 3zwl_B Eukaryotic translation 99.9 7.3E-24 2.5E-28 193.1 25.0 188 169-357 21-242 (369)
48 3bg1_A Protein SEC13 homolog; 99.9 2.2E-25 7.5E-30 200.7 14.3 146 174-345 7-161 (316)
49 3vl1_A 26S proteasome regulato 99.9 2E-24 6.8E-29 201.2 21.2 198 154-357 115-315 (420)
50 4ggc_A P55CDC, cell division c 99.9 2.3E-23 7.9E-28 186.3 26.9 202 157-358 44-309 (318)
51 3f3f_A Nucleoporin SEH1; struc 99.9 6.4E-24 2.2E-28 191.4 22.7 166 174-358 5-243 (351)
52 3jrp_A Fusion protein of prote 99.9 3.4E-24 1.2E-28 196.2 20.5 163 170-358 1-185 (379)
53 1k8k_C P40, ARP2/3 complex 41 99.9 8.1E-24 2.8E-28 193.5 23.0 195 154-358 70-268 (372)
54 1k8k_C P40, ARP2/3 complex 41 99.9 3.3E-23 1.1E-27 189.4 25.4 181 153-357 25-226 (372)
55 3lrv_A PRE-mRNA-splicing facto 99.9 7.6E-24 2.6E-28 192.6 20.5 178 151-357 88-285 (343)
56 3ei3_B DNA damage-binding prot 99.9 1.8E-23 6.2E-28 192.6 23.1 161 168-358 61-230 (383)
57 4gq1_A NUP37; propeller, trans 99.9 1.4E-24 4.6E-29 201.5 15.4 205 153-357 106-382 (393)
58 3odt_A Protein DOA1; ubiquitin 99.9 5.9E-23 2E-27 183.1 25.4 171 152-358 118-290 (313)
59 3ei3_B DNA damage-binding prot 99.9 3.1E-23 1.1E-27 191.1 23.9 176 151-357 89-275 (383)
60 3dm0_A Maltose-binding peripla 99.9 2.6E-23 8.8E-28 206.7 24.9 162 168-358 460-626 (694)
61 3k26_A Polycomb protein EED; W 99.9 9.6E-24 3.3E-28 192.3 19.3 204 153-358 90-360 (366)
62 4g56_B MGC81050 protein; prote 99.9 1.3E-23 4.3E-28 192.5 19.5 158 176-358 38-207 (357)
63 3mkq_A Coatomer beta'-subunit; 99.9 1.8E-23 6.1E-28 210.9 22.3 159 171-357 4-165 (814)
64 1gxr_A ESG1, transducin-like e 99.9 2.4E-22 8.3E-27 180.8 27.5 172 153-354 114-285 (337)
65 4aez_A CDC20, WD repeat-contai 99.9 1.2E-22 4.1E-27 188.7 25.7 175 153-358 108-287 (401)
66 3jro_A Fusion protein of prote 99.9 4.4E-23 1.5E-27 206.9 23.9 181 151-357 24-231 (753)
67 3v7d_B Cell division control p 99.9 1.2E-22 4.2E-27 191.9 25.6 203 151-358 135-375 (464)
68 2xyi_A Probable histone-bindin 99.9 6E-23 2E-27 192.6 23.1 180 154-358 147-347 (430)
69 1sq9_A Antiviral protein SKI8; 99.9 5.2E-23 1.8E-27 190.1 22.0 153 177-358 183-389 (397)
70 4gga_A P55CDC, cell division c 99.9 1.7E-22 5.9E-27 188.8 25.8 199 157-358 124-389 (420)
71 3gre_A Serine/threonine-protei 99.9 5.8E-24 2E-28 199.4 15.4 190 168-358 50-286 (437)
72 2aq5_A Coronin-1A; WD40 repeat 99.9 4.6E-23 1.6E-27 191.4 21.3 177 154-358 100-293 (402)
73 2j04_B YDR362CP, TAU91; beta p 99.9 1.2E-23 4E-28 201.7 17.6 177 154-358 179-380 (524)
74 3sfz_A APAF-1, apoptotic pepti 99.9 5.9E-23 2E-27 216.4 24.4 159 171-357 606-767 (1249)
75 3mmy_A MRNA export factor; mRN 99.9 3.6E-23 1.2E-27 188.4 19.8 135 164-327 23-164 (368)
76 4e54_B DNA damage-binding prot 99.9 7.3E-24 2.5E-28 199.1 15.5 163 169-358 108-276 (435)
77 3dw8_B Serine/threonine-protei 99.9 4.8E-23 1.6E-27 193.3 21.0 185 153-358 45-309 (447)
78 1gxr_A ESG1, transducin-like e 99.9 3.8E-22 1.3E-26 179.6 25.7 159 168-357 171-330 (337)
79 1r5m_A SIR4-interacting protei 99.9 7.5E-23 2.6E-27 190.0 21.8 161 168-357 235-418 (425)
80 3vl1_A 26S proteasome regulato 99.9 3.8E-23 1.3E-27 192.5 19.2 170 154-354 74-267 (420)
81 1r5m_A SIR4-interacting protei 99.9 6.3E-22 2.2E-26 183.7 27.0 194 156-354 128-350 (425)
82 2xyi_A Probable histone-bindin 99.9 2.2E-22 7.5E-27 188.8 23.9 179 152-357 198-403 (430)
83 2pm9_A Protein WEB1, protein t 99.9 8.4E-23 2.9E-27 189.7 20.4 178 154-358 132-331 (416)
84 2j04_A TAU60, YPL007P, hypothe 99.9 5.9E-23 2E-27 194.1 17.5 153 178-358 83-248 (588)
85 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.3E-22 1.5E-26 187.8 23.1 172 153-353 120-326 (450)
86 3k26_A Polycomb protein EED; W 99.9 4.1E-22 1.4E-26 181.4 22.0 155 175-357 13-185 (366)
87 4aez_A CDC20, WD repeat-contai 99.9 5.1E-22 1.8E-26 184.4 22.6 161 169-358 206-374 (401)
88 3gre_A Serine/threonine-protei 99.9 1.1E-22 3.8E-27 190.7 17.9 198 154-358 188-434 (437)
89 1sq9_A Antiviral protein SKI8; 99.9 2.7E-22 9.2E-27 185.2 20.2 182 150-355 28-254 (397)
90 3mkq_A Coatomer beta'-subunit; 99.9 4.4E-22 1.5E-26 200.8 23.4 172 154-354 31-206 (814)
91 4aow_A Guanine nucleotide-bind 99.9 2.6E-21 9E-26 174.5 26.0 172 156-358 148-331 (340)
92 3odt_A Protein DOA1; ubiquitin 99.9 1.2E-21 3.9E-26 174.7 22.9 159 169-357 7-167 (313)
93 3zwl_B Eukaryotic translation 99.9 2.6E-21 8.9E-26 176.1 25.3 158 172-358 165-340 (369)
94 3lrv_A PRE-mRNA-splicing facto 99.9 2.8E-22 9.6E-27 182.3 18.5 174 150-358 50-238 (343)
95 3dw8_B Serine/threonine-protei 99.9 3.6E-22 1.2E-26 187.3 19.4 179 178-357 26-251 (447)
96 3vu4_A KMHSV2; beta-propeller 99.9 4.8E-22 1.7E-26 181.8 19.6 187 169-358 8-265 (355)
97 2pm9_A Protein WEB1, protein t 99.9 3.1E-22 1.1E-26 185.8 18.6 181 155-355 42-236 (416)
98 3i2n_A WD repeat-containing pr 99.9 1.2E-21 4.1E-26 177.9 21.7 180 154-358 135-347 (357)
99 3jro_A Fusion protein of prote 99.9 2.9E-22 1E-26 200.9 18.5 160 173-358 2-183 (753)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.7E-22 1.2E-26 188.3 17.7 157 176-357 98-264 (450)
101 3sfz_A APAF-1, apoptotic pepti 99.9 2.8E-21 9.5E-26 203.7 25.7 136 167-330 644-781 (1249)
102 2j04_A TAU60, YPL007P, hypothe 99.9 1.7E-21 5.8E-26 184.2 21.1 154 172-356 117-290 (588)
103 1yfq_A Cell cycle arrest prote 99.9 2.1E-22 7.2E-27 182.0 14.4 153 174-358 5-173 (342)
104 2oaj_A Protein SNI1; WD40 repe 99.9 5.6E-22 1.9E-26 202.1 18.9 170 150-343 449-690 (902)
105 3i2n_A WD repeat-containing pr 99.9 7.8E-22 2.7E-26 179.1 17.3 173 154-357 86-284 (357)
106 4a11_B DNA excision repair pro 99.9 1.7E-21 5.8E-26 180.0 19.5 159 170-357 33-211 (408)
107 4a11_B DNA excision repair pro 99.9 1.7E-20 6E-25 173.2 26.3 187 157-358 121-359 (408)
108 2oaj_A Protein SNI1; WD40 repe 99.9 2.3E-21 7.9E-26 197.6 21.0 183 153-358 34-236 (902)
109 3v7d_B Cell division control p 99.9 1.1E-20 3.9E-25 178.3 24.3 153 173-358 263-415 (464)
110 1pgu_A Actin interacting prote 99.9 3.1E-21 1.1E-25 188.0 20.5 168 158-357 39-231 (615)
111 1pgu_A Actin interacting prote 99.9 1E-20 3.5E-25 184.4 23.8 174 154-358 84-277 (615)
112 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-20 8.5E-25 174.9 25.0 197 152-358 147-359 (435)
113 4h5i_A Guanine nucleotide-exch 99.9 4.8E-21 1.7E-25 175.8 19.6 124 172-323 211-343 (365)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.1E-20 1.4E-24 173.8 25.2 200 149-356 210-429 (445)
115 1yfq_A Cell cycle arrest prote 99.9 6E-21 2.1E-25 172.4 18.6 203 152-357 27-275 (342)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.2E-20 1.1E-24 174.6 24.1 195 154-358 135-342 (445)
117 1p22_A F-BOX/WD-repeat protein 99.9 2.2E-20 7.5E-25 175.3 21.2 151 172-358 248-408 (435)
118 2oit_A Nucleoporin 214KDA; NH2 99.9 3.3E-21 1.1E-25 181.0 15.1 147 178-353 90-259 (434)
119 3vu4_A KMHSV2; beta-propeller 99.9 3.2E-20 1.1E-24 169.7 20.9 131 198-356 155-328 (355)
120 4gq1_A NUP37; propeller, trans 99.9 3.9E-21 1.3E-25 178.2 13.6 152 178-357 87-279 (393)
121 4gga_A P55CDC, cell division c 99.8 5E-19 1.7E-23 165.3 21.2 143 171-342 267-414 (420)
122 4ggc_A P55CDC, cell division c 99.8 1.2E-18 4.1E-23 155.5 20.9 143 183-357 28-174 (318)
123 2w18_A PALB2, fancn, partner a 99.8 1.5E-18 5.2E-23 154.5 19.9 147 182-358 113-308 (356)
124 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.4E-17 4.7E-22 155.4 23.5 162 158-353 159-329 (415)
125 1l0q_A Surface layer protein; 99.8 1.9E-17 6.3E-22 152.6 24.0 166 154-353 8-177 (391)
126 3bws_A Protein LP49; two-domai 99.8 1.3E-17 4.4E-22 155.8 20.3 153 175-357 164-327 (433)
127 3bws_A Protein LP49; two-domai 99.8 8.2E-18 2.8E-22 157.1 18.5 155 169-353 112-272 (433)
128 1l0q_A Surface layer protein; 99.8 6.8E-17 2.3E-21 148.8 23.7 163 157-353 53-218 (391)
129 2oit_A Nucleoporin 214KDA; NH2 99.8 2.2E-18 7.5E-23 161.7 12.9 159 180-357 36-216 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 2.6E-16 8.8E-21 146.8 22.1 153 169-354 212-373 (415)
131 2ojh_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 130.8 18.0 149 175-353 36-191 (297)
132 2ojh_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 130.9 16.3 153 174-354 123-291 (297)
133 2ecf_A Dipeptidyl peptidase IV 99.6 5.2E-15 1.8E-19 147.7 16.7 146 180-353 36-227 (741)
134 1xfd_A DIP, dipeptidyl aminope 99.6 1.8E-15 6.2E-20 150.6 12.8 170 163-353 40-273 (723)
135 3vgz_A Uncharacterized protein 99.6 1.3E-13 4.5E-18 124.6 22.0 157 166-353 170-332 (353)
136 1nir_A Nitrite reductase; hemo 99.6 6.6E-14 2.3E-18 134.8 21.0 175 155-352 156-341 (543)
137 1ri6_A Putative isomerase YBHE 99.6 8.6E-14 2.9E-18 125.1 20.4 168 155-350 12-193 (343)
138 3vgz_A Uncharacterized protein 99.6 1.3E-13 4.4E-18 124.6 21.1 161 163-352 72-248 (353)
139 1k32_A Tricorn protease; prote 99.6 3E-14 1E-18 147.8 18.6 151 173-354 329-491 (1045)
140 3u4y_A Uncharacterized protein 99.6 2.6E-13 9E-18 121.7 20.4 158 168-351 70-237 (331)
141 1xfd_A DIP, dipeptidyl aminope 99.6 2.2E-15 7.5E-20 150.0 7.3 145 182-354 18-192 (723)
142 3hfq_A Uncharacterized protein 99.6 2.5E-13 8.4E-18 123.0 20.1 169 157-351 15-203 (347)
143 3u4y_A Uncharacterized protein 99.6 2.6E-13 9E-18 121.7 19.9 163 156-350 18-191 (331)
144 2ecf_A Dipeptidyl peptidase IV 99.6 2E-14 7E-19 143.5 13.6 149 182-353 110-304 (741)
145 1pby_B Quinohemoprotein amine 99.6 1.4E-12 4.9E-17 116.7 23.8 187 159-353 57-298 (337)
146 1nir_A Nitrite reductase; hemo 99.5 1.8E-13 6.2E-18 131.8 18.7 134 187-350 144-295 (543)
147 1ri6_A Putative isomerase YBHE 99.5 8.6E-13 2.9E-17 118.5 21.0 165 158-350 60-246 (343)
148 3hfq_A Uncharacterized protein 99.5 5E-12 1.7E-16 114.3 25.1 146 182-353 142-304 (347)
149 3o4h_A Acylamino-acid-releasin 99.5 8E-14 2.7E-18 135.4 14.1 135 184-354 153-301 (582)
150 1z68_A Fibroblast activation p 99.5 7.2E-15 2.5E-19 146.3 6.6 168 165-353 41-271 (719)
151 1k32_A Tricorn protease; prote 99.5 1.2E-13 4.1E-18 143.3 15.7 144 179-354 294-440 (1045)
152 3o4h_A Acylamino-acid-releasin 99.5 7.9E-14 2.7E-18 135.5 13.3 139 183-355 112-266 (582)
153 3scy_A Hypothetical bacterial 99.5 1.4E-12 4.9E-17 118.6 20.9 148 182-353 156-324 (361)
154 2z3z_A Dipeptidyl aminopeptida 99.5 1E-13 3.4E-18 137.7 13.4 154 174-354 114-331 (706)
155 1pby_B Quinohemoprotein amine 99.5 1.1E-12 3.8E-17 117.5 18.4 143 156-331 9-171 (337)
156 2z3z_A Dipeptidyl aminopeptida 99.5 6.7E-13 2.3E-17 131.8 16.7 143 183-351 183-372 (706)
157 1z68_A Fibroblast activation p 99.5 1.9E-13 6.5E-18 136.0 11.2 139 185-354 20-188 (719)
158 4a5s_A Dipeptidyl peptidase 4 99.4 5.1E-13 1.7E-17 133.6 13.5 140 182-353 18-189 (740)
159 1jmx_B Amine dehydrogenase; ox 99.4 5.3E-12 1.8E-16 113.7 18.6 145 157-332 20-184 (349)
160 1jmx_B Amine dehydrogenase; ox 99.4 8.9E-13 3E-17 118.8 12.4 139 185-352 4-165 (349)
161 1q7f_A NHL, brain tumor CG1071 99.4 4.4E-11 1.5E-15 105.0 21.8 159 169-358 108-274 (286)
162 1jof_A Carboxy-CIS,CIS-muconat 99.4 5.3E-12 1.8E-16 115.3 16.1 149 179-353 38-211 (365)
163 1xip_A Nucleoporin NUP159; bet 99.4 1E-11 3.5E-16 113.5 17.4 135 178-352 86-231 (388)
164 3scy_A Hypothetical bacterial 99.4 7E-11 2.4E-15 107.4 22.1 181 155-353 24-229 (361)
165 3pe7_A Oligogalacturonate lyas 99.4 1.3E-11 4.3E-16 113.2 16.6 157 168-353 18-207 (388)
166 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.4E-11 2.2E-15 108.1 21.1 146 182-353 84-273 (365)
167 4a5s_A Dipeptidyl peptidase 4 99.4 2.1E-12 7E-17 129.2 10.9 166 166-352 42-277 (740)
168 3pe7_A Oligogalacturonate lyas 99.4 2.4E-11 8.2E-16 111.3 17.1 160 162-351 62-254 (388)
169 3azo_A Aminopeptidase; POP fam 99.3 5.8E-12 2E-16 124.1 12.9 156 173-354 117-313 (662)
170 3azo_A Aminopeptidase; POP fam 99.3 1.1E-11 3.8E-16 122.1 14.0 153 173-354 60-261 (662)
171 2oiz_A Aromatic amine dehydrog 99.3 2E-10 6.8E-15 104.8 19.9 184 167-354 38-324 (361)
172 3e5z_A Putative gluconolactona 99.3 1.4E-10 4.7E-15 102.5 17.8 179 172-352 19-235 (296)
173 3fvz_A Peptidyl-glycine alpha- 99.3 6.4E-10 2.2E-14 100.0 20.3 146 180-353 23-215 (329)
174 2dg1_A DRP35, lactonase; beta 99.2 2.4E-09 8.2E-14 95.9 22.5 150 171-349 35-196 (333)
175 3fvz_A Peptidyl-glycine alpha- 99.2 3.7E-10 1.3E-14 101.5 17.1 146 178-353 140-310 (329)
176 2xdw_A Prolyl endopeptidase; a 99.2 1.6E-10 5.5E-15 114.9 15.8 147 178-350 122-301 (710)
177 1q7f_A NHL, brain tumor CG1071 99.2 3.1E-09 1E-13 93.2 21.6 146 178-354 74-226 (286)
178 1xip_A Nucleoporin NUP159; bet 99.2 1E-10 3.5E-15 106.8 11.9 136 182-358 39-185 (388)
179 2oiz_A Aromatic amine dehydrog 99.2 1.5E-09 5.1E-14 99.0 18.8 64 281-347 295-360 (361)
180 2bkl_A Prolyl endopeptidase; m 99.2 2.8E-10 9.4E-15 113.0 13.9 148 178-353 118-289 (695)
181 2gop_A Trilobed protease; beta 99.1 1.7E-09 5.9E-14 97.4 17.0 133 183-354 106-281 (347)
182 2gop_A Trilobed protease; beta 99.1 1.4E-09 4.7E-14 98.0 15.5 136 181-353 59-233 (347)
183 3c5m_A Oligogalacturonate lyas 99.1 1.3E-10 4.3E-15 106.6 8.6 140 183-352 83-255 (396)
184 3no2_A Uncharacterized protein 99.1 3.9E-09 1.3E-13 92.5 17.5 171 155-355 12-185 (276)
185 2dg1_A DRP35, lactonase; beta 99.1 5.8E-10 2E-14 100.0 10.9 142 181-353 6-153 (333)
186 3c5m_A Oligogalacturonate lyas 99.1 1.6E-09 5.5E-14 99.1 13.9 145 177-354 184-370 (396)
187 2xdw_A Prolyl endopeptidase; a 99.0 1.1E-08 3.7E-13 101.7 20.0 145 183-355 173-356 (710)
188 3no2_A Uncharacterized protein 99.0 1.6E-08 5.5E-13 88.5 18.3 156 169-355 64-233 (276)
189 3e5z_A Putative gluconolactona 99.0 4.6E-09 1.6E-13 92.6 14.6 141 182-353 116-275 (296)
190 1rwi_B Serine/threonine-protei 99.0 1.4E-08 4.8E-13 87.9 16.8 150 180-357 107-257 (270)
191 1yr2_A Prolyl oligopeptidase; 99.0 3.8E-09 1.3E-13 105.6 13.9 147 179-352 161-333 (741)
192 3g4e_A Regucalcin; six bladed 99.0 8.2E-08 2.8E-12 84.8 20.1 143 181-347 98-254 (297)
193 3dsm_A Uncharacterized protein 99.0 4.2E-08 1.4E-12 88.1 18.4 154 167-351 71-241 (328)
194 1rwi_B Serine/threonine-protei 98.9 2.1E-08 7.2E-13 86.8 15.4 145 179-353 65-210 (270)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 8.5E-08 2.9E-12 84.8 18.4 147 181-352 117-286 (314)
196 2bkl_A Prolyl endopeptidase; m 98.9 8.6E-08 3E-12 95.0 17.9 140 184-354 171-338 (695)
197 1qks_A Cytochrome CD1 nitrite 98.8 1E-06 3.5E-11 84.8 24.5 166 167-353 184-360 (567)
198 1qks_A Cytochrome CD1 nitrite 98.8 1.6E-07 5.4E-12 90.5 18.4 130 190-349 165-312 (567)
199 2z2n_A Virginiamycin B lyase; 98.8 1.6E-06 5.4E-11 75.7 23.3 144 178-352 54-200 (299)
200 2z2n_A Virginiamycin B lyase; 98.8 6.4E-07 2.2E-11 78.3 20.5 148 176-353 10-159 (299)
201 3iuj_A Prolyl endopeptidase; h 98.8 7.4E-08 2.5E-12 95.4 14.5 150 178-353 126-299 (693)
202 2mad_H Methylamine dehydrogena 98.8 2E-06 6.9E-11 78.5 22.8 183 167-353 54-337 (373)
203 3hrp_A Uncharacterized protein 98.8 7.7E-07 2.6E-11 82.3 20.1 145 181-352 131-285 (409)
204 3dsm_A Uncharacterized protein 98.7 4.9E-07 1.7E-11 81.0 17.6 141 181-354 44-191 (328)
205 3hrp_A Uncharacterized protein 98.7 7.6E-07 2.6E-11 82.4 18.6 164 179-358 217-404 (409)
206 2ghs_A AGR_C_1268P; regucalcin 98.7 2.4E-06 8.2E-11 76.4 21.2 146 181-353 134-291 (326)
207 1yr2_A Prolyl oligopeptidase; 98.7 1.1E-06 3.7E-11 87.7 19.7 142 184-354 212-382 (741)
208 2qe8_A Uncharacterized protein 98.7 7.6E-07 2.6E-11 80.3 16.7 169 168-353 101-309 (343)
209 3g4e_A Regucalcin; six bladed 98.7 6E-06 2.1E-10 72.6 22.1 145 179-353 52-217 (297)
210 2qc5_A Streptogramin B lactona 98.6 2E-05 6.7E-10 68.7 23.5 146 178-353 59-206 (300)
211 3dr2_A Exported gluconolactona 98.6 9.1E-07 3.1E-11 78.3 15.0 150 171-350 35-203 (305)
212 2qc5_A Streptogramin B lactona 98.6 8.6E-06 3E-10 71.0 20.8 146 178-353 17-164 (300)
213 2ghs_A AGR_C_1268P; regucalcin 98.6 1.1E-05 3.8E-10 72.0 21.5 142 180-352 89-247 (326)
214 3sjl_D Methylamine dehydrogena 98.6 1.4E-06 4.9E-11 79.2 15.0 137 187-353 39-206 (386)
215 2qe8_A Uncharacterized protein 98.6 2.6E-06 9E-11 76.7 16.9 149 181-352 17-212 (343)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 3.3E-06 1.1E-10 74.4 17.2 142 179-352 69-243 (314)
217 3dr2_A Exported gluconolactona 98.6 4.1E-06 1.4E-10 74.0 17.7 151 173-354 78-258 (305)
218 2mad_H Methylamine dehydrogena 98.5 1E-05 3.4E-10 73.8 18.4 119 189-331 29-165 (373)
219 2ece_A 462AA long hypothetical 98.4 2.9E-05 1E-09 71.4 19.2 172 167-353 171-399 (462)
220 3c75_H MADH, methylamine dehyd 98.4 1.8E-05 6.1E-10 73.2 17.8 185 166-353 105-389 (426)
221 2hz6_A Endoplasmic reticulum t 98.3 6.4E-08 2.2E-12 88.4 0.4 66 191-258 8-73 (369)
222 2hz6_A Endoplasmic reticulum t 98.3 8.8E-09 3E-13 94.1 -5.6 129 168-331 27-157 (369)
223 1mda_H Methylamine dehydrogena 98.3 8.6E-06 2.9E-10 73.9 14.0 87 165-253 51-158 (368)
224 3c75_H MADH, methylamine dehyd 98.3 1.2E-05 4E-10 74.4 14.5 132 190-351 82-244 (426)
225 3sjl_D Methylamine dehydrogena 98.3 1.2E-05 4E-10 73.2 14.0 128 166-326 65-212 (386)
226 3iuj_A Prolyl endopeptidase; h 98.3 2.4E-05 8.2E-10 77.4 17.1 139 184-353 178-344 (693)
227 3nol_A Glutamine cyclotransfer 98.2 0.00046 1.6E-08 58.9 21.6 181 169-353 30-244 (262)
228 2iwa_A Glutamine cyclotransfer 98.2 0.00017 5.6E-09 62.2 18.5 151 169-353 8-169 (266)
229 1kb0_A Quinohemoprotein alcoho 98.2 3.4E-05 1.2E-09 76.0 15.3 129 193-350 328-535 (677)
230 2iwa_A Glutamine cyclotransfer 98.1 0.00031 1E-08 60.5 18.0 157 168-353 52-225 (266)
231 1yiq_A Quinohemoprotein alcoho 98.1 8.3E-05 2.9E-09 73.4 15.9 52 299-350 481-534 (689)
232 3hxj_A Pyrrolo-quinoline quino 98.0 0.00011 3.9E-09 64.9 14.5 181 170-358 126-318 (330)
233 3hxj_A Pyrrolo-quinoline quino 98.0 8.9E-05 3.1E-09 65.6 13.6 84 170-259 166-249 (330)
234 1npe_A Nidogen, entactin; glyc 98.0 0.0017 5.9E-08 55.6 20.5 136 182-347 37-179 (267)
235 3mbr_X Glutamine cyclotransfer 97.9 0.0017 5.7E-08 54.9 19.5 155 168-353 51-223 (243)
236 2xe4_A Oligopeptidase B; hydro 97.9 5E-05 1.7E-09 75.8 11.8 142 182-352 175-337 (751)
237 3nok_A Glutaminyl cyclase; bet 97.9 0.0015 5.3E-08 55.7 19.0 158 166-354 81-255 (268)
238 2ece_A 462AA long hypothetical 97.9 0.00022 7.5E-09 65.7 14.7 133 190-351 93-269 (462)
239 3mbr_X Glutamine cyclotransfer 97.9 0.002 7E-08 54.3 19.2 147 170-352 9-166 (243)
240 3nok_A Glutaminyl cyclase; bet 97.9 0.00058 2E-08 58.3 15.9 147 171-353 44-198 (268)
241 1fwx_A Nitrous oxide reductase 97.9 5.8E-05 2E-09 71.8 10.7 153 184-355 198-408 (595)
242 1mda_H Methylamine dehydrogena 97.7 8.2E-05 2.8E-09 67.5 8.6 105 194-331 34-163 (368)
243 1npe_A Nidogen, entactin; glyc 97.7 0.012 4.2E-07 50.2 21.2 135 181-347 122-263 (267)
244 1yiq_A Quinohemoprotein alcoho 97.7 0.0018 6E-08 63.9 17.6 76 185-260 239-345 (689)
245 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0012 3.9E-08 59.8 14.5 133 192-357 239-371 (376)
246 1kb0_A Quinohemoprotein alcoho 97.6 0.0016 5.3E-08 64.2 16.1 77 185-261 247-354 (677)
247 2fp8_A Strictosidine synthase; 97.6 0.0029 9.8E-08 55.9 16.3 141 181-353 80-247 (322)
248 1fwx_A Nitrous oxide reductase 97.6 0.0036 1.2E-07 59.7 17.2 159 181-347 134-343 (595)
249 3tc9_A Hypothetical hydrolase; 97.5 0.0031 1.1E-07 58.4 16.5 137 182-347 138-282 (430)
250 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.0029 1E-07 57.1 15.4 110 192-332 53-171 (376)
251 3qqz_A Putative uncharacterize 97.5 0.018 6E-07 49.1 19.2 158 174-351 20-190 (255)
252 2ad6_A Methanol dehydrogenase 97.4 0.0033 1.1E-07 60.5 15.5 51 303-353 474-525 (571)
253 2fp8_A Strictosidine synthase; 97.4 0.0069 2.4E-07 53.4 16.6 141 182-352 127-300 (322)
254 4a2l_A BT_4663, two-component 97.4 0.033 1.1E-06 55.7 23.1 147 180-353 356-516 (795)
255 1kv9_A Type II quinohemoprotei 97.3 0.0044 1.5E-07 60.8 14.5 34 300-333 465-498 (668)
256 1ijq_A LDL receptor, low-densi 97.3 0.078 2.7E-06 46.6 21.4 139 180-347 29-176 (316)
257 2xbg_A YCF48-like protein; pho 97.2 0.044 1.5E-06 48.5 19.5 150 178-357 160-315 (327)
258 3v64_C Agrin; beta propeller, 97.2 0.061 2.1E-06 48.1 19.9 139 180-347 72-215 (349)
259 2p4o_A Hypothetical protein; p 97.2 0.081 2.8E-06 46.1 20.4 124 171-324 23-148 (306)
260 1flg_A Protein (quinoprotein e 97.1 0.0028 9.4E-08 61.2 11.5 49 303-351 496-546 (582)
261 3p5b_L Low density lipoprotein 97.1 0.087 3E-06 48.0 21.0 143 178-348 109-259 (400)
262 3v64_C Agrin; beta propeller, 97.1 0.054 1.8E-06 48.5 18.8 141 181-350 116-261 (349)
263 2p9w_A MAL S 1 allergenic prot 97.1 0.022 7.6E-07 50.2 15.5 158 178-352 10-202 (334)
264 3v65_B Low-density lipoprotein 97.1 0.052 1.8E-06 49.3 18.8 141 179-347 114-258 (386)
265 4a2l_A BT_4663, two-component 97.1 0.1 3.5E-06 52.1 22.6 146 180-353 405-561 (795)
266 3qqz_A Putative uncharacterize 97.1 0.12 4E-06 44.0 21.8 166 170-354 58-243 (255)
267 3v65_B Low-density lipoprotein 97.0 0.073 2.5E-06 48.3 18.7 135 182-345 160-299 (386)
268 4hw6_A Hypothetical protein, I 96.9 0.016 5.5E-07 53.6 14.1 137 182-347 140-285 (433)
269 2xbg_A YCF48-like protein; pho 96.9 0.18 6.1E-06 44.5 20.3 159 168-357 109-272 (327)
270 2xe4_A Oligopeptidase B; hydro 96.9 0.055 1.9E-06 53.8 18.3 70 185-254 225-305 (751)
271 1w6s_A Methanol dehydrogenase 96.8 0.035 1.2E-06 53.6 15.8 49 303-351 483-533 (599)
272 1cru_A Protein (soluble quinop 96.8 0.18 6.1E-06 46.9 20.0 54 180-233 26-87 (454)
273 1kv9_A Type II quinohemoprotei 96.8 0.05 1.7E-06 53.3 17.0 76 185-260 234-340 (668)
274 3m0c_C LDL receptor, low-densi 96.7 0.26 8.8E-06 49.2 21.4 140 179-347 422-570 (791)
275 3nol_A Glutamine cyclotransfer 96.6 0.03 1E-06 47.7 12.4 127 166-312 113-244 (262)
276 3das_A Putative oxidoreductase 96.6 0.37 1.2E-05 42.9 19.8 161 170-352 21-219 (347)
277 3a9g_A Putative uncharacterize 96.6 0.16 5.3E-06 45.5 17.6 151 176-352 24-215 (354)
278 2ism_A Putative oxidoreductase 96.6 0.11 3.6E-06 46.6 16.4 71 179-252 29-113 (352)
279 3kya_A Putative phosphatase; s 96.6 0.072 2.4E-06 49.9 15.5 143 182-347 140-322 (496)
280 3pbp_A Nucleoporin NUP82; beta 96.5 0.072 2.4E-06 48.5 14.8 117 182-317 67-206 (452)
281 3v9f_A Two-component system se 96.5 0.16 5.5E-06 50.6 18.9 144 180-353 362-513 (781)
282 3sov_A LRP-6, low-density lipo 96.4 0.26 9E-06 43.3 17.6 136 182-347 36-178 (318)
283 2ad6_A Methanol dehydrogenase 96.3 0.17 5.7E-06 48.6 16.9 75 186-261 240-343 (571)
284 3tc9_A Hypothetical hydrolase; 96.2 0.24 8.2E-06 45.6 17.1 71 182-252 227-300 (430)
285 3v9f_A Two-component system se 96.2 0.25 8.6E-06 49.1 18.6 145 180-354 449-602 (781)
286 4hw6_A Hypothetical protein, I 96.2 0.19 6.7E-06 46.3 16.5 155 182-353 229-421 (433)
287 3amr_A 3-phytase; beta-propell 96.2 0.17 5.7E-06 45.0 15.0 137 192-354 40-200 (355)
288 1k3i_A Galactose oxidase precu 96.2 0.059 2E-06 52.6 13.3 117 185-328 190-328 (656)
289 3pbp_A Nucleoporin NUP82; beta 96.2 0.58 2E-05 42.6 18.4 138 191-347 31-192 (452)
290 2p4o_A Hypothetical protein; p 96.1 0.31 1.1E-05 42.3 16.3 85 212-327 22-108 (306)
291 3m0c_C LDL receptor, low-densi 96.0 1.5 5E-05 43.8 22.6 117 179-324 469-590 (791)
292 3sov_A LRP-6, low-density lipo 96.0 0.74 2.5E-05 40.4 21.1 139 181-348 79-222 (318)
293 1w6s_A Methanol dehydrogenase 96.0 0.27 9.1E-06 47.4 16.4 76 185-261 245-350 (599)
294 1flg_A Protein (quinoprotein e 95.9 0.2 6.8E-06 48.2 15.1 77 185-262 250-364 (582)
295 2p9w_A MAL S 1 allergenic prot 95.8 0.16 5.6E-06 44.7 13.0 119 183-324 65-216 (334)
296 1ijq_A LDL receptor, low-densi 95.8 0.86 2.9E-05 39.8 22.1 140 181-351 77-224 (316)
297 3p5b_L Low density lipoprotein 95.8 1.1 3.6E-05 40.7 24.5 136 179-343 157-299 (400)
298 2g8s_A Glucose/sorbosone dehyd 95.7 0.15 5.1E-06 45.6 12.7 53 180-233 17-76 (353)
299 3amr_A 3-phytase; beta-propell 95.7 0.49 1.7E-05 42.0 15.5 127 181-331 128-272 (355)
300 1tl2_A L10, protein (tachylect 95.5 0.33 1.1E-05 40.1 12.8 143 182-352 42-199 (236)
301 3sre_A PON1, serum paraoxonase 95.5 1.3 4.5E-05 39.5 18.5 142 181-352 112-284 (355)
302 3sre_A PON1, serum paraoxonase 95.4 0.69 2.4E-05 41.3 16.0 137 168-331 151-308 (355)
303 1k3i_A Galactose oxidase precu 95.3 0.46 1.6E-05 46.3 15.6 94 162-255 223-325 (656)
304 3s94_A LRP-6, low-density lipo 94.9 2.2 7.5E-05 41.2 19.0 138 180-347 39-183 (619)
305 4a0p_A LRP6, LRP-6, low-densit 94.8 3 0.0001 40.3 19.6 138 180-347 36-178 (628)
306 2ism_A Putative oxidoreductase 94.4 0.87 3E-05 40.5 13.9 106 222-353 30-153 (352)
307 3kya_A Putative phosphatase; s 94.3 0.85 2.9E-05 42.6 13.9 70 183-252 249-340 (496)
308 2vpj_A Kelch-like protein 12; 94.0 2.6 8.8E-05 36.1 16.1 108 191-328 112-236 (301)
309 2xn4_A Kelch-like protein 2; s 93.9 2.2 7.5E-05 36.6 15.2 134 163-328 82-234 (302)
310 1tl2_A L10, protein (tachylect 93.8 0.34 1.2E-05 40.0 8.9 136 193-357 5-156 (236)
311 1n7d_A LDL receptor, low-densi 93.5 0.12 4E-06 51.0 6.7 135 181-342 496-633 (699)
312 1n7d_A LDL receptor, low-densi 93.2 0.15 5E-06 50.3 7.0 112 183-323 455-571 (699)
313 3a9g_A Putative uncharacterize 93.2 2.4 8.1E-05 37.7 14.4 107 222-354 28-154 (354)
314 3s94_A LRP-6, low-density lipo 93.1 6.5 0.00022 37.9 19.9 136 181-346 349-490 (619)
315 3ii7_A Kelch-like protein 7; p 93.0 3.6 0.00012 35.2 15.1 62 191-254 55-128 (306)
316 1cru_A Protein (soluble quinop 92.4 2.9 0.0001 38.6 14.2 107 222-354 26-163 (454)
317 4asc_A Kelch repeat and BTB do 92.3 3.2 0.00011 35.8 13.8 108 191-328 98-226 (315)
318 3ii7_A Kelch-like protein 7; p 92.2 3.6 0.00012 35.2 13.9 89 162-254 74-179 (306)
319 2vpj_A Kelch-like protein 12; 92.1 5 0.00017 34.2 14.7 89 162-254 132-232 (301)
320 2xzh_A Clathrin heavy chain 1; 92.0 6.1 0.00021 34.8 19.2 149 171-342 138-309 (365)
321 2be1_A Serine/threonine-protei 91.9 0.45 1.6E-05 42.1 7.6 116 193-332 11-139 (339)
322 4a0p_A LRP6, LRP-6, low-densit 91.8 9.7 0.00033 36.7 20.7 133 181-344 389-529 (628)
323 2xn4_A Kelch-like protein 2; s 91.6 5.6 0.00019 33.9 14.4 62 191-254 61-134 (302)
324 1zgk_A Kelch-like ECH-associat 91.5 3.7 0.00013 35.3 13.3 108 191-328 121-245 (308)
325 4asc_A Kelch repeat and BTB do 90.3 8 0.00027 33.2 14.4 62 191-254 148-222 (315)
326 3das_A Putative oxidoreductase 90.3 6.4 0.00022 34.8 13.6 116 217-354 26-159 (347)
327 2woz_A Kelch repeat and BTB do 90.1 7.7 0.00026 33.3 14.1 62 191-254 109-185 (318)
328 1bpo_A Protein (clathrin); cla 89.8 12 0.0004 34.4 22.1 151 170-343 136-309 (494)
329 3ei3_A DNA damage-binding prot 89.6 22 0.00075 37.1 20.2 112 179-322 884-998 (1158)
330 2g8s_A Glucose/sorbosone dehyd 89.3 3.8 0.00013 36.3 11.4 110 223-354 18-149 (353)
331 2oxj_A Hybrid alpha/beta pepti 89.0 0.72 2.5E-05 24.9 3.8 28 78-105 4-31 (34)
332 3sbq_A Nitrous-oxide reductase 88.9 3 0.0001 39.5 10.5 115 223-354 323-454 (638)
333 3s25_A Hypothetical 7-bladed b 87.4 13 0.00046 32.0 14.2 60 187-251 59-134 (302)
334 2wg3_C Hedgehog-interacting pr 87.2 18 0.00062 33.3 15.1 54 180-233 13-79 (463)
335 3m48_A General control protein 86.9 1.1 3.9E-05 24.0 3.7 28 78-105 3-30 (33)
336 4gq2_M Nucleoporin NUP120; bet 86.7 29 0.001 35.2 18.2 39 224-262 237-275 (950)
337 1zgk_A Kelch-like ECH-associat 86.5 14 0.00049 31.4 13.7 62 191-254 168-241 (308)
338 3c3g_A Alpha/beta peptide with 85.9 1.4 4.9E-05 23.5 3.8 28 78-105 3-30 (33)
339 2uvk_A YJHT; unknown function, 85.6 9.1 0.00031 33.5 11.7 49 202-251 168-224 (357)
340 3c3f_A Alpha/beta peptide with 84.7 1.7 5.9E-05 23.3 3.8 28 78-105 4-31 (34)
341 1xi4_A Clathrin heavy chain; a 84.2 9.6 0.00033 40.4 12.2 151 171-341 137-307 (1630)
342 1uo4_A General control protein 84.1 2.1 7.1E-05 23.1 3.9 28 78-105 4-31 (34)
343 4gq2_M Nucleoporin NUP120; bet 84.1 4.9 0.00017 40.9 10.2 38 294-331 237-274 (950)
344 1dh3_A Transcription factor CR 83.8 3.1 0.0001 25.8 5.4 37 69-105 16-52 (55)
345 2bni_A General control protein 83.7 2.1 7.3E-05 23.1 3.9 28 78-105 4-31 (34)
346 2zwa_A Leucine carboxyl methyl 82.8 14 0.00048 36.1 12.6 65 190-254 499-578 (695)
347 2woz_A Kelch repeat and BTB do 82.8 22 0.00074 30.4 14.5 65 188-254 53-137 (318)
348 2zwa_A Leucine carboxyl methyl 82.7 30 0.001 33.7 14.9 63 191-254 451-523 (695)
349 2wq1_A General control protein 82.6 2.5 8.4E-05 22.6 3.8 28 78-105 3-30 (33)
350 2xzh_A Clathrin heavy chain 1; 82.1 26 0.00089 30.8 17.2 117 187-335 73-200 (365)
351 2hy6_A General control protein 81.4 2.5 8.5E-05 22.8 3.5 28 78-105 4-31 (34)
352 1kd8_A GABH AIV, GCN4 acid bas 81.1 2.2 7.6E-05 23.3 3.3 29 78-106 4-32 (36)
353 4fhn_B Nucleoporin NUP120; pro 80.6 4.5 0.00015 42.1 8.5 38 294-331 239-276 (1139)
354 1kd8_B GABH BLL, GCN4 acid bas 80.4 2.6 8.9E-05 23.0 3.5 29 78-106 4-32 (36)
355 2dgc_A Protein (GCN4); basic d 80.2 4.3 0.00015 25.9 5.2 37 69-105 24-60 (63)
356 2wg3_C Hedgehog-interacting pr 78.5 41 0.0014 30.9 15.0 29 223-251 14-43 (463)
357 1t2k_D Cyclic-AMP-dependent tr 78.3 5.2 0.00018 25.3 5.2 37 69-105 16-52 (61)
358 3sbq_A Nitrous-oxide reductase 77.7 37 0.0013 32.2 12.6 70 183-253 325-408 (638)
359 2wt7_A Proto-oncogene protein 77.4 5.7 0.00019 25.3 5.2 36 70-105 18-53 (63)
360 2wuj_A Septum site-determining 75.8 4.2 0.00014 25.3 4.1 32 73-104 25-56 (57)
361 1jnm_A Proto-oncogene C-JUN; B 75.3 7 0.00024 24.7 5.2 37 69-105 16-52 (62)
362 1gu4_A CAAT/enhancer binding p 74.5 5.9 0.0002 26.5 4.8 40 72-111 33-72 (78)
363 1ci6_A Transcription factor AT 72.8 9.5 0.00032 24.3 5.3 39 69-107 17-55 (63)
364 2r2v_A GCN4 leucine zipper; co 72.2 6.4 0.00022 21.2 3.6 28 78-105 4-31 (34)
365 1p9i_A Cortexillin I/GCN4 hybr 72.1 4.6 0.00016 20.4 2.8 23 82-104 6-28 (31)
366 3b7f_A Glycosyl hydrolase, BNR 71.8 48 0.0017 29.3 12.0 59 293-352 177-251 (394)
367 1bpo_A Protein (clathrin); cla 71.7 62 0.0021 29.7 17.6 118 186-335 71-199 (494)
368 3f7f_A Nucleoporin NUP120; nuc 71.5 8 0.00027 37.7 6.8 37 294-332 223-259 (729)
369 1hjb_A Ccaat/enhancer binding 71.4 5.8 0.0002 27.1 4.3 40 73-112 34-73 (87)
370 4fhn_B Nucleoporin NUP120; pro 70.4 3.7 0.00013 42.8 4.6 38 182-219 239-276 (1139)
371 3s25_A Hypothetical 7-bladed b 69.6 34 0.0012 29.3 10.0 63 187-254 110-177 (302)
372 2uvk_A YJHT; unknown function, 69.5 40 0.0014 29.2 10.8 62 191-254 19-96 (357)
373 3ott_A Two-component system se 67.8 94 0.0032 30.3 19.1 142 181-352 103-249 (758)
374 3f7f_A Nucleoporin NUP120; nuc 66.6 11 0.00038 36.7 6.7 37 182-220 223-259 (729)
375 3zwu_A Alkaline phosphatase PH 62.2 27 0.00092 33.3 8.4 58 294-351 477-547 (592)
376 3ra3_A P1C; coiled coil domain 62.0 2 6.7E-05 21.2 0.3 19 86-104 4-22 (28)
377 2yy0_A C-MYC-binding protein; 56.5 8.4 0.00029 23.5 2.5 24 82-105 19-42 (53)
378 2be1_A Serine/threonine-protei 54.2 46 0.0016 29.2 8.0 29 192-220 111-139 (339)
379 3zwu_A Alkaline phosphatase PH 53.4 55 0.0019 31.2 8.9 58 183-240 478-548 (592)
380 1fmh_A General control protein 52.9 22 0.00075 18.2 3.8 27 78-104 4-30 (33)
381 3he5_A Synzip1; heterodimeric 51.9 23 0.00079 19.8 3.5 22 76-97 4-25 (49)
382 3ott_A Two-component system se 50.2 1.9E+02 0.0064 28.1 19.2 137 181-351 146-296 (758)
383 4a9v_A PHOX; hydrolase, beta-p 47.0 80 0.0027 30.0 8.7 59 294-352 477-548 (592)
384 1xi4_A Clathrin heavy chain; a 46.3 52 0.0018 35.1 7.9 106 188-324 73-189 (1630)
385 1gd2_E Transcription factor PA 45.6 34 0.0012 22.2 4.3 36 68-103 22-57 (70)
386 4a9v_A PHOX; hydrolase, beta-p 45.0 98 0.0034 29.3 9.0 60 181-240 476-548 (592)
387 1t6f_A Geminin; coiled-coil, c 42.7 41 0.0014 18.3 3.7 24 72-95 11-34 (37)
388 3ei3_A DNA damage-binding prot 39.5 3.5E+02 0.012 28.1 21.2 73 180-252 553-635 (1158)
389 2akf_A Coronin-1A; coiled coil 36.8 46 0.0016 17.2 3.7 24 80-103 4-27 (32)
390 2l5g_B Putative uncharacterize 32.8 71 0.0024 18.2 4.7 29 76-104 10-38 (42)
391 3a7o_A Autophagy protein 16; c 30.9 52 0.0018 21.1 3.2 24 79-102 50-73 (75)
392 3twe_A Alpha4H; unknown functi 30.8 52 0.0018 16.0 2.5 17 87-103 6-22 (27)
393 2jee_A YIIU; FTSZ, septum, coi 29.7 90 0.0031 20.8 4.4 18 83-100 28-45 (81)
394 1lyp_A CAP18; lipopolysacchari 29.1 62 0.0021 16.4 4.6 21 69-89 2-22 (32)
395 3a2a_A Voltage-gated hydrogen 29.0 1E+02 0.0034 18.7 4.6 36 71-106 14-49 (58)
396 3iv1_A Tumor susceptibility ge 27.9 1.3E+02 0.0046 19.8 5.3 32 72-103 43-74 (78)
397 3ljm_A Coil Ser L9C; de novo d 27.6 66 0.0022 16.2 3.8 23 79-101 5-27 (31)
398 1nkp_A C-MYC, MYC proto-oncoge 27.2 1.2E+02 0.0043 20.4 5.0 23 80-102 64-86 (88)
399 1uii_A Geminin; human, DNA rep 27.0 1.3E+02 0.0046 20.0 4.8 19 84-102 55-73 (83)
400 2oqq_A Transcription factor HY 27.0 93 0.0032 17.7 4.9 21 76-96 18-38 (42)
401 2ke4_A CDC42-interacting prote 25.9 1.7E+02 0.0057 20.3 6.3 46 60-105 6-52 (98)
402 3nmd_A CGMP dependent protein 25.5 1.3E+02 0.0045 19.5 4.5 27 77-103 42-68 (72)
403 2ve7_A Kinetochore protein HEC 25.3 35 0.0012 29.6 2.4 41 64-104 167-207 (315)
404 3b7f_A Glycosyl hydrolase, BNR 24.5 3.5E+02 0.012 23.5 13.4 46 194-240 24-74 (394)
405 1suu_A DNA gyrase subunit A; t 24.0 3.3E+02 0.011 23.1 16.7 111 191-322 113-230 (312)
406 3no0_A DNA gyrase subunit A; D 23.5 3.2E+02 0.011 22.7 16.0 121 180-321 67-194 (276)
407 1nkp_B MAX protein, MYC proto- 23.1 1.1E+02 0.0039 20.2 4.2 27 77-103 49-75 (83)
408 3ci9_A Heat shock factor-bindi 22.6 1.2E+02 0.0042 17.9 3.7 23 67-89 5-27 (48)
409 1go4_E MAD1 (mitotic arrest de 22.6 1E+02 0.0036 21.5 3.9 28 78-105 15-42 (100)
410 1gmj_A ATPase inhibitor; coile 22.4 1.8E+02 0.0062 19.5 5.0 28 71-98 40-67 (84)
411 2zxx_A Geminin; coiled-coil, c 22.3 1.8E+02 0.0061 19.3 4.8 30 72-101 38-67 (79)
412 1nlw_A MAD protein, MAX dimeri 21.9 1.4E+02 0.0047 19.8 4.3 33 73-105 45-77 (80)
413 3fs3_A Nucleosome assembly pro 21.7 1.7E+02 0.0057 25.8 5.9 43 60-102 42-87 (359)
414 1deb_A APC protein, adenomatou 21.7 1.4E+02 0.0046 17.7 3.7 23 79-101 7-29 (54)
415 1wlq_A Geminin; coiled-coil; 2 20.1 2E+02 0.007 19.2 4.9 26 72-97 42-67 (83)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.6e-28 Score=223.89 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=159.5
Q ss_pred eeecCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE
Q psy11015 152 LKVQTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~ 229 (360)
+.+...+.+.+|+...... .....+.+|.+.|++++|+|++++|++|+.|++|++||+.+++++..+.+|.+.|.+++
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 3455566667776654332 23345679999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC--CC----------CCCCCCCC-----ccccccceeEeeCC
Q psy11015 230 FLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSD--LD----------ESKEPDES-----SITLRTPVKELLGH 291 (360)
Q Consensus 230 ~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~-----~~~~~~~~~~~~~h 291 (360)
|+|++. +|++|+.|++|++||++++.....+....... .. ......+. ......++..+.+|
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h 256 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH 256 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC
T ss_pred ecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC
Confidence 999884 78999999999999999887655443221110 00 00011111 22345577889999
Q ss_pred CCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcc-cccchh
Q psy11015 292 SNVVIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASP-LLLAIR 358 (360)
Q Consensus 292 ~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~-~~~~ir 358 (360)
...|++++|+|+| ++|++|+.||+|+|||+.+++.+ .+.+|.+.|++++|+|+|. +++|+ .|+.|+
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 9999999999998 57999999999999999998765 5678999999999999885 67665 477765
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=9.3e-29 Score=221.48 Aligned_cols=160 Identities=17% Similarity=0.202 Sum_probs=146.0
Q ss_pred eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
...++|.+|.+.|++++|+|++++|++|+.||+|++||+.++.++..+.+|..+|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQS 329 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~ 329 (360)
+.++ ..+..+.+|...|.+++|+|++.+|++|+.||+|++||++++ .....
T Consensus 84 ~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 135 (304)
T 2ynn_A 84 YNTG----------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (304)
T ss_dssp TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE
T ss_pred CCCC----------------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh
Confidence 9876 346678899999999999999999999999999999999887 55678
Q ss_pred EecCCCceEEEEEcC-CCCEEEccc-ccchh
Q psy11015 330 LTEPGEAIRAAAGRT-GGPIRASPL-LLAIR 358 (360)
Q Consensus 330 l~~h~~~v~~~~~~~-~g~~las~~-~~~ir 358 (360)
+.+|...|++++|+| ++.++++++ |+.||
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 899999999999999 677777665 55554
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.3e-28 Score=229.88 Aligned_cols=204 Identities=25% Similarity=0.386 Sum_probs=165.9
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
.+..+..+.+|.. .++...+++.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|...|.+++|+|
T Consensus 125 s~s~Dg~i~vwd~--~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 125 SASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 202 (410)
T ss_dssp EEESSSCEEEEET--TTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS
T ss_pred EEeCCCeEEEEEC--CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC
Confidence 3344444444543 46677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC---------CCCCCCC-----ccccccceeEeeCCCCcEEEE
Q psy11015 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE---------SKEPDES-----SITLRTPVKELLGHSNVVIAA 298 (360)
Q Consensus 233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-----~~~~~~~~~~~~~h~~~v~~i 298 (360)
+++++++|+.|++|++||+.++.....+..+....... .....+. ..........+.+|...|.++
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 99999999999999999999987665544432211111 0111111 122334567788999999999
Q ss_pred EEcCC--------------------CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 299 DWLSD--------------------GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 299 ~~sp~--------------------g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
+|+|+ |.+|++|+.||+|++||++++.++..+.+|...|++++|+|+|.++++++ |+.|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 99996 67999999999999999999999999999999999999999999888776 4445
Q ss_pred h
Q psy11015 358 R 358 (360)
Q Consensus 358 r 358 (360)
|
T Consensus 363 ~ 363 (410)
T 1vyh_C 363 R 363 (410)
T ss_dssp E
T ss_pred E
Confidence 4
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.2e-28 Score=220.95 Aligned_cols=163 Identities=21% Similarity=0.305 Sum_probs=150.4
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 247 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~ 247 (360)
..+.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|+
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 152 ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 45566778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||++++ .....+.+|...|.+++|+|++.+|++|+.||+|++||+.+++++
T Consensus 232 iwd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 232 IYDVQHA----------------------------NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEECCCc----------------------------ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 9998765 345678899999999999999999999999999999999999999
Q ss_pred EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.++.+|...|++++|+|+|..+++++ |+.||
T Consensus 284 ~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 284 HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999999999999999999888766 45554
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=6.3e-28 Score=219.50 Aligned_cols=164 Identities=16% Similarity=0.307 Sum_probs=147.8
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i 246 (360)
..++..+.++.+|.+.|++++|+|++.+|++|+.||+|++||++++.++..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v 250 (340)
T 1got_B 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
++||++++... ..+. .+...|.+++|+|+|++|++|+.||.|++||+.++
T Consensus 251 ~iwd~~~~~~~----------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 251 RLFDLRADQEL----------------------------MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEEETTTTEEE----------------------------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEECCCCcEE----------------------------EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 99999876332 2222 23457999999999999999999999999999999
Q ss_pred eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 325 TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
..+..+.+|...|++++|+|+|.+++|++ |+.||
T Consensus 303 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 99999999999999999999999888776 55564
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.4e-27 Score=213.83 Aligned_cols=179 Identities=25% Similarity=0.338 Sum_probs=158.1
Q ss_pred eeeecCCeEEEeeecCc---cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015 151 KLKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 227 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~ 227 (360)
.+.+.....+..|.... ..+.+++.+.+|...|.+++|+|++.+|++|+.|++|++||+.+++++..+.+|.+.|.+
T Consensus 33 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~ 112 (319)
T 3frx_A 33 LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMS 112 (319)
T ss_dssp EEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEE
Confidence 34555666666676533 335678899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC----
Q psy11015 228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---- 303 (360)
Q Consensus 228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~---- 303 (360)
++|+|++.++++|+.|++|++||+... .+..+.+|...|.+++|+|.
T Consensus 113 ~~~~~~~~~l~s~s~D~~i~vwd~~~~-----------------------------~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 113 VDIDKKASMIISGSRDKTIKVWTIKGQ-----------------------------CLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTSC-----------------------------EEEEECCCSSCEEEEEECCC----
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCC-----------------------------eEEEEeccCCcEEEEEEccCCCCC
Confidence 999999999999999999999998643 46678899999999999985
Q ss_pred --CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 304 --GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 304 --g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+.++++|+.||.|++||+++++....+.+|...|++++|+|+|.++++++ |+.||
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 45899999999999999999999999999999999999999999998876 55554
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=215.62 Aligned_cols=181 Identities=19% Similarity=0.280 Sum_probs=163.7
Q ss_pred eeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEE
Q psy11015 150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229 (360)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~ 229 (360)
..+.+.....+.+|............+.+|...|.+++|++++..+++|+.|++|++||+.+++++..+.+|...+.+++
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~ 129 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLA 129 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEE
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEE
Confidence 34567777788888877767777788999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|++++|++|+.|+.|++||+.++ .....+..|...|.+++|+|+|++|++
T Consensus 130 ~spdg~~l~~g~~dg~v~i~~~~~~----------------------------~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 130 FSPDSQYLATGTHVGKVNIFGVESG----------------------------KKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp ECTTSSEEEEECTTSEEEEEETTTC----------------------------SEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCEEEEEcCCCcEEEEEcCCC----------------------------ceeEEecCCCceEEEEEECCCCCEEEE
Confidence 9999999999999999999999876 345567788889999999999999999
Q ss_pred EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+.||.|++||+++++.+..+.+|..+|++++|+|+|.++++++ |+.||
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 99999999999999999999999999999999999999998877 44443
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=4.3e-28 Score=226.38 Aligned_cols=158 Identities=27% Similarity=0.443 Sum_probs=146.8
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~ 252 (360)
...+.+|.++|++++|+|++.+|++|+.||+|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
++ .++..+.+|...|.+++|+|+|++|++|+.||+|++||++++.++.++.+
T Consensus 181 ~~----------------------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 232 (410)
T 1vyh_C 181 GF----------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232 (410)
T ss_dssp SS----------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CC----------------------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC
Confidence 65 34667789999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 333 PGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 333 h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|...|.+++|+|+|.++++++ |+.||
T Consensus 233 h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 233 HREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999988876 44443
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=1.2e-26 Score=210.99 Aligned_cols=175 Identities=19% Similarity=0.309 Sum_probs=153.2
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSV 228 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i 228 (360)
.+..+..+..|.. .++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.++ .....+.+|.+.|.++
T Consensus 72 s~s~Dg~v~iWd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~ 149 (340)
T 1got_B 72 SASQDGKLIIWDS--YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCC 149 (340)
T ss_dssp EEETTTEEEEEET--TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEE
T ss_pred EEeCCCcEEEEEC--CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEE
Confidence 4444555555543 456778889999999999999999999999999999999999875 4667888999999999
Q ss_pred EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015 229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 308 (360)
Q Consensus 229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~ 308 (360)
.|+|++. +++++.|++|++||+.++ .++..+.+|.+.|.+++|+|++++++
T Consensus 150 ~~~~~~~-l~s~s~d~~i~~wd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 150 RFLDDNQ-IVTSSGDTTCALWDIETG----------------------------QQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTE-EEEEETTSCEEEEETTTT----------------------------EEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EECCCCc-EEEEECCCcEEEEECCCC----------------------------cEEEEEcCCCCceEEEEECCCCCEEE
Confidence 9998875 889999999999999876 34567889999999999999999999
Q ss_pred EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+|+.||+|++||++++.++..+.+|...|++++|+|+|.++++++ |+.||
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~ 251 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence 999999999999999999999999999999999999999988877 44443
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-27 Score=213.98 Aligned_cols=184 Identities=19% Similarity=0.212 Sum_probs=149.0
Q ss_pred eeeecCCeEEEeeecCccceeeeeee-ec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-------CCeEEEEEeCC
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSF-SG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-------TGKCVLQYSGH 221 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-------~~~~~~~~~~h 221 (360)
...+.....+..|.........+..+ .+ |.+.|++++|+|++++|++|+.|++|++||+. ...++..+.+|
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence 34455566667777665445566666 45 99999999999999999999999999999985 34677889999
Q ss_pred CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
.+.|.+++|+|++++|++|+.|++|++||+..... ...++..+.+|...|.+++|+
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~------------------------~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE------------------------EYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC------------------------CCEEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC------------------------CeEEEEEeccCCCceEEEEEC
Confidence 99999999999999999999999999999853311 112466788999999999999
Q ss_pred CCCCEEEEEECCCcEEEEECCCC--eEEEEEecCCCceEEEEEcCC--CCEEEccc-ccchh
Q psy11015 302 SDGEQVITASWDRVANLFDVETG--TILQSLTEPGEAIRAAAGRTG--GPIRASPL-LLAIR 358 (360)
Q Consensus 302 p~g~~l~tgs~dg~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~--g~~las~~-~~~ir 358 (360)
|++.+|++|+.||+|++||..++ +++..+.+|...|++++|+|+ +.++++++ |+.||
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~ 224 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence 99999999999999999998876 678899999999999999998 66777665 55554
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=6.7e-27 Score=209.37 Aligned_cols=177 Identities=24% Similarity=0.267 Sum_probs=150.6
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEEEEe
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i~~~ 231 (360)
.+.....+..|.. .++.++..+.+|.+.|++++|+|++++|++|+.||+|++||++++ .+...+.+|...|.+++|+
T Consensus 72 s~s~d~~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 72 VGSDDFRIRVFNY--NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp EEETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred EECCCCEEEEEEC--CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence 3444445555543 567788999999999999999999999999999999999999887 5667889999999999999
Q ss_pred e-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--CCCEEE
Q psy11015 232 P-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVI 308 (360)
Q Consensus 232 p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~g~~l~ 308 (360)
| ++.+|++|+.|++|++||+..+.. ......+|...+..++|+| ++.+|+
T Consensus 150 p~~~~~l~sgs~D~~v~iwd~~~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 150 PKDPSTFASGCLDRTVKVWSLGQSTP---------------------------NFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp TTCTTEEEEEETTSEEEEEETTCSSC---------------------------SEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCc---------------------------cceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 9 678999999999999999876521 1222345678899999987 778999
Q ss_pred EEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+|+.||+|++||+++++++.++.+|...|++++|+|++++++|++ |+.||
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~ 253 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999999999999999999999999999888876 55554
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=3e-27 Score=215.52 Aligned_cols=181 Identities=27% Similarity=0.312 Sum_probs=152.0
Q ss_pred eecCCeEEEeeecCccceeeee-eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeEEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVR 229 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~~i~ 229 (360)
.+..+..+.+|........... ...+|.+.|.+++|+|++++|++|+.|++|++|++..+ .++..+.+|.+.|.+++
T Consensus 33 s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 3445556666665544333333 34789999999999999999999999999999999876 56888999999999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|++++|++|+.|++|++||+..+... ..+..+.+|...|.+++|+|++.+|++
T Consensus 113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~~-------------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 113 WAPSGNLLATCSRDKSVWVWEVDEEDEY-------------------------ECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECTTSCE-------------------------EEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred EeCCCCEEEEEECCCeEEEEECCCCCCe-------------------------EEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 9999999999999999999998765221 235677899999999999999999999
Q ss_pred EECCCcEEEEECCCCe--EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 310 ASWDRVANLFDVETGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+.||+|++||..++. +..++.+|...|++++|+|+|.+|++++ |+.||
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence 9999999999998875 4578889999999999999999988876 55554
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=6.6e-27 Score=209.75 Aligned_cols=160 Identities=27% Similarity=0.441 Sum_probs=148.6
Q ss_pred eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
.....++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 329 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~ 329 (360)
|+.++ ..+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..
T Consensus 93 d~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 93 DVSSG----------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ETTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ECCCC----------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 99866 34667889999999999999999999999999999999999999999
Q ss_pred EecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 330 LTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 330 l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
+..|..+|.+++|+|+|.+++++. ++.|
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999999999999999888776 4444
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.1e-26 Score=212.57 Aligned_cols=164 Identities=22% Similarity=0.317 Sum_probs=146.1
Q ss_pred ccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~ 244 (360)
..++.++.++.+|...|.+++|+| ++..|++|+.||+|++||+++++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus 183 ~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 183 VESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence 356778899999999999999988 467999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
+|++||++.+... ..+. .+...+.+++|+|+|.+|++|+.||.|++||+.
T Consensus 263 ~v~lwd~~~~~~~----------------------------~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 263 TCRLYDLRADREV----------------------------AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp CEEEEETTTTEEE----------------------------EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eEEEEECCCCcEE----------------------------EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 9999999876332 2222 234578999999999999999999999999999
Q ss_pred CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
++..+..+.+|...|++++|+|+|.+++|++ |+.||
T Consensus 315 ~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 315 KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp TCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 9999999999999999999999999888876 55554
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=4.4e-27 Score=214.38 Aligned_cols=163 Identities=24% Similarity=0.366 Sum_probs=142.1
Q ss_pred ceeeeeeeecCCC-CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE---EEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015 169 SCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL---QYSGHSGSVNSVRFLPNKDLVLSASGDK 244 (360)
Q Consensus 169 ~~~~~~~l~~h~~-~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~---~~~~h~~~v~~i~~~p~~~~l~s~s~d~ 244 (360)
...++.++.+|.+ .|++++|+|++.+|++|+.|++|+|||+.++.... ...+|.+.|.+++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3467889999988 99999999999999999999999999998886432 2368999999999999999999999999
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
++++||+..+.. ..+..+.+|...|.+++|+|+|++|++|+.||+|++||+.++
T Consensus 84 ~v~iw~~~~~~~--------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 84 TTCIWKKNQDDF--------------------------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp CEEEEEECCC-E--------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cEEEEEccCCCe--------------------------EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 999999875521 245678899999999999999999999999999999999876
Q ss_pred ---eEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 325 ---TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 325 ---~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
.++..+.+|...|.+++|+|++.++++++ |+.|
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 45677889999999999999999888876 4444
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=9.1e-27 Score=207.81 Aligned_cols=182 Identities=23% Similarity=0.281 Sum_probs=153.3
Q ss_pred eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeE
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN 226 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~ 226 (360)
...+..+..+.+|........++.++.+|.+.|++++|+|+ +.+|+||+.|++|++||+.++. .+..+.+|...|.
T Consensus 24 las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~ 103 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN 103 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE
T ss_pred EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee
Confidence 34456667777787766666788999999999999999864 7899999999999999999874 6677889999999
Q ss_pred EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-
Q psy11015 227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD- 303 (360)
Q Consensus 227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~- 303 (360)
+++|+|+ +.+|++|+.|++|++||++.+.. .....+.+|...|.+++|+|+
T Consensus 104 ~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--------------------------~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 104 SVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--------------------------BCCEEEECCSSCEEEEEECCCC
T ss_pred EEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--------------------------eeeeeeecccCccceEeecCCc
Confidence 9999997 88999999999999999875411 113457789999999999997
Q ss_pred ------------CCEEEEEECCCcEEEEECCCCe----EEEEEecCCCceEEEEEcCCC---CEEEccc-ccchh
Q psy11015 304 ------------GEQVITASWDRVANLFDVETGT----ILQSLTEPGEAIRAAAGRTGG---PIRASPL-LLAIR 358 (360)
Q Consensus 304 ------------g~~l~tgs~dg~i~iwd~~~~~----~~~~l~~h~~~v~~~~~~~~g---~~las~~-~~~ir 358 (360)
+++|++|+.||+|++||++++. ....+.+|...|++++|+|++ .++||++ |+.||
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 5799999999999999998765 667889999999999999985 7888776 55554
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2.5e-26 Score=209.11 Aligned_cols=181 Identities=20% Similarity=0.262 Sum_probs=154.1
Q ss_pred eeeecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCe
Q psy11015 151 KLKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v 225 (360)
.+.+.....+..|..... .+.+...+.+|.+.|++++|+|++.++++|+.|++|++||+.+++++..+.+|.+.|
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v 121 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV 121 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE
Confidence 445666677777776432 356788899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-
Q psy11015 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG- 304 (360)
Q Consensus 226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g- 304 (360)
.+++|+|++++|++|+.|++|++||+...... ......+|...|.+++|+|++
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~--------------------------~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKF--------------------------SSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEE--------------------------ECCTTTSCSSCEEEEEECCCCC
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCcee--------------------------eeecccCCCceeeeeeeccccc
Confidence 99999999999999999999999998733111 011123688899999999987
Q ss_pred ---------CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 305 ---------EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 305 ---------~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.++++|+.||.|++|| ..+.....+.+|...|++++|+|+|.++++++ |+.||
T Consensus 176 ~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 176 SANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred cccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 7999999999999999 56778888999999999999999999998876 44443
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=7.1e-27 Score=214.11 Aligned_cols=203 Identities=15% Similarity=0.134 Sum_probs=152.7
Q ss_pred cCCeEEEeeecCccceeee--eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 155 QTSKIVSSFKTSLLSCYKI--RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
...+.+.+|.......... ....+|.+.|++++|+|++++|++|+.||+|++||+.+++++..+.+|.+.|++++|+|
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 3344444554433322222 33458999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC--CC----------CCCCCCCC-----ccccccceeEeeCCCCc
Q psy11015 233 NKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSD--LD----------ESKEPDES-----SITLRTPVKELLGHSNV 294 (360)
Q Consensus 233 ~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~-----~~~~~~~~~~~~~h~~~ 294 (360)
++. ++++++.|++|++||++++............. .. ......+. ......++..+.+|...
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 875 78999999999999998876554332221110 00 00001111 12334567888899999
Q ss_pred EEEEEEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC-CCCEEEccc-ccchh
Q psy11015 295 VIAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT-GGPIRASPL-LLAIR 358 (360)
Q Consensus 295 v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~-~g~~las~~-~~~ir 358 (360)
|++++|+|++ ++|++|+.||+|+|||+.+++.+..+ +|.+.|++++|+| ++.+|+|++ |+.||
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 9999999987 57999999999999999999887765 7999999999998 788888765 66654
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.7e-26 Score=206.97 Aligned_cols=180 Identities=21% Similarity=0.226 Sum_probs=145.5
Q ss_pred eecCCeEEEeeecCc-----cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEEEeCCCc
Q psy11015 153 KVQTSKIVSSFKTSL-----LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT----GKCVLQYSGHSG 223 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~ 223 (360)
.+.....+..|.... ....++..+.+|.+.|++++|+|++++|++|+.|++|++||+.. .+++..+.+|..
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 344455556665532 23567888999999999999999999999999999999999943 367888999999
Q ss_pred CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015 224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 303 (360)
Q Consensus 224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~ 303 (360)
.|.+++|+|++.+|++|+.|++|++||+.++. ..++..+.+|...|.+++|+|+
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--------------------------~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--------------------------WECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTE--------------------------EEEEEEECCCSSCEEEEEECCS
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--------------------------eeEEEEccCCCCcEEEEEecCC
Confidence 99999999999999999999999999986541 1246778899999999999998
Q ss_pred --CCEEEEEECCCcEEEEECCCC--------eEEEEEec-CCCceEEEEEcCCCCEEEcccccchh
Q psy11015 304 --GEQVITASWDRVANLFDVETG--------TILQSLTE-PGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 304 --g~~l~tgs~dg~i~iwd~~~~--------~~~~~l~~-h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
+.+|++|+.||+|++||+.++ .+...+.. |...|++++|++++.+++.+.|+.||
T Consensus 209 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~ 274 (330)
T 2hes_X 209 EGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLA 274 (330)
T ss_dssp SSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred CCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEE
Confidence 779999999999999998754 45556655 89999999999888777777777665
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=2.1e-25 Score=199.88 Aligned_cols=174 Identities=27% Similarity=0.456 Sum_probs=152.6
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+.....+..|.. ..+.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|+
T Consensus 41 ~~~dg~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 41 SSADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred eeCCCeEEEEeC--CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 344444555543 456678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 313 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d 313 (360)
++++++|+.|++|++||+.++ ..+..+..|...|.+++|+|++.++++|+.|
T Consensus 119 ~~~l~s~~~d~~i~iwd~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 119 SNLIVSGSFDESVRIWDVKTG----------------------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCEEEEEeCCCcEEEEECCCC----------------------------EEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 999999999999999999866 3456778899999999999999999999999
Q ss_pred CcEEEEECCCCeEEEEEe-cCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 314 RVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 314 g~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
|.|++||+++++.+..+. .+...+..++|+|+|.+++++. ++.|
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 999999999999888775 4567899999999999888776 4444
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=7.7e-26 Score=204.41 Aligned_cols=191 Identities=19% Similarity=0.203 Sum_probs=150.6
Q ss_pred ccceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCC-----eEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~-----~~~~~~~~h~~~v~~i~~~p~~~~l~s~ 240 (360)
.....+..+|+||++.|++|+|+|+ +++|+|||.||+|+|||+.++ .+...+.+|...|.+++|+|++++|++|
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3455677889999999999999997 579999999999999998754 4678899999999999999999999999
Q ss_pred eCCCcEEEEEcccCeeEeeeCCCCCCC------------------CC--------------CCC-----------CC---
Q psy11015 241 SGDKSVHIWQAVINWECLVSNNDNDSD------------------LD--------------ESK-----------EP--- 274 (360)
Q Consensus 241 s~d~~i~vwd~~~~~~~~~~~~~~~~~------------------~~--------------~~~-----------~~--- 274 (360)
+.|+.|++|+................. .. ... ..
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 999999999987654433222110000 00 000 00
Q ss_pred --------CCC-----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015 275 --------DES-----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341 (360)
Q Consensus 275 --------~~~-----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 341 (360)
.+. ..........+.+|.+.|++++|+|+|++|++|+.||.|++||+++++.+..+..+ ..|.+++
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 000 01122355677789999999999999999999999999999999999999988755 5799999
Q ss_pred EcCCCCEEEcccccchh
Q psy11015 342 GRTGGPIRASPLLLAIR 358 (360)
Q Consensus 342 ~~~~g~~las~~~~~ir 358 (360)
|+|++.+++++.++.||
T Consensus 264 ~~~~~~~~~~~~d~~i~ 280 (340)
T 4aow_A 264 FSPNRYWLCAATGPSIK 280 (340)
T ss_dssp ECSSSSEEEEEETTEEE
T ss_pred cCCCCceeeccCCCEEE
Confidence 99999999999887764
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.9e-25 Score=201.38 Aligned_cols=173 Identities=21% Similarity=0.354 Sum_probs=150.6
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+.....+..|.. .++..+..+.+|.+.|++++|+|++.+|++|+.|++|++||++ +.++..+.+|...|.+++|+|.
T Consensus 83 ~s~D~~v~~wd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 83 ASWDKTLRLWDV--ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EeCCCEEEEEEC--CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 333444444443 5667889999999999999999999999999999999999996 6678889999999999999985
Q ss_pred ------CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015 234 ------KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV 307 (360)
Q Consensus 234 ------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l 307 (360)
+..+++++.|++|++||+.+. .....+.+|...|.+++|+|+|++|
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQF----------------------------QIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTT----------------------------EEEEEECCCCSCEEEEEECTTSSEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcc----------------------------hhheeecCCCCcEEEEEEcCCCCEE
Confidence 448999999999999998765 2456678999999999999999999
Q ss_pred EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
++|+.||+|++||+.+++.+..+..+ ..|.+++|+|+|.+++++.+.+++
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~ 261 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIK 261 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcE
Confidence 99999999999999999999999854 689999999999999998876653
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=2.6e-25 Score=203.41 Aligned_cols=177 Identities=16% Similarity=0.227 Sum_probs=153.2
Q ss_pred eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC------eEEEEEeCCCcCe
Q psy11015 152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG------KCVLQYSGHSGSV 225 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~------~~~~~~~~h~~~v 225 (360)
+.+.....+.+|.. .++.....+..|...|.+++|+|++..|++|+.|+.+++|++... .....+.+|.+.|
T Consensus 80 ~s~s~Dg~v~vWd~--~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v 157 (354)
T 2pbi_B 80 VSSSQDGKVIVWDS--FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYL 157 (354)
T ss_dssp EEEETTSEEEEEET--TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred EEEeCCCeEEEEEC--CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcE
Confidence 44555555655653 455667788899999999999999999999999999999998643 3456778899999
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--C
Q psy11015 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--D 303 (360)
Q Consensus 226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~ 303 (360)
.+++|+|++..|++|+.|++|++||+.++ .++..+.+|...|.+++|+| +
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESG----------------------------QLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTC----------------------------CEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCC----------------------------eEEEEEcCCCCCeEEEEEEeCCC
Confidence 99999999999999999999999999876 35677889999999999987 5
Q ss_pred CCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 304 GEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 304 g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|++|++|+.||+|++||+++++++..+.+|...|++++|+|+|.++++++ |+.||
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~ 265 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCR 265 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence 78999999999999999999999999999999999999999999998877 44443
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=9.7e-26 Score=221.01 Aligned_cols=168 Identities=23% Similarity=0.306 Sum_probs=142.8
Q ss_pred eeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
+....++.+|.+.|++++|+|++. .|++|+.|++|++||..+++++..+.+|.+.|++++|+|+|++|++|+.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 456678899999999999999987 6999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~ 328 (360)
||+.++........ ......+|.+.|.+++|+|+|++|++|+.|++|++||+.+++++.
T Consensus 217 wd~~~g~~~~~~~~---------------------~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 217 YNGVDGTKTGVFED---------------------DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp EETTTCCEEEECBC---------------------TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EECCCCcEeeeecc---------------------ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee
Confidence 99887743321100 000112799999999999999999999999999999999887654
Q ss_pred E-------------------------------------------EecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 329 S-------------------------------------------LTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 329 ~-------------------------------------------l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+ +.+|...|++++|+|+|.++++++ |+.||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 276 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp EEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 3 347889999999999999998876 45443
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=5.1e-26 Score=210.11 Aligned_cols=190 Identities=18% Similarity=0.181 Sum_probs=149.5
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
...+.+++.||.+.|++++|+|++++|+||+.||+|+|||+.+++....+.+|...|.+++|+|+|+++++|+.|+.+++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCeeE-------eeeCCCCCCCCCC----------CCCCCCCcc-----ccccceeEe-----eCCCCcEEEEEEc
Q psy11015 249 WQAVINWEC-------LVSNNDNDSDLDE----------SKEPDESSI-----TLRTPVKEL-----LGHSNVVIAADWL 301 (360)
Q Consensus 249 wd~~~~~~~-------~~~~~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~-----~~h~~~v~~i~~s 301 (360)
||+.+.... .....+....... .....+... .....+..+ .+|...|.+++|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 998753211 0011111111000 001111111 122333444 5789999999998
Q ss_pred C-CCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 302 S-DGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 302 p-~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
| ++++|++|+.||+|++||++ .+..+..+.+|.+.|++++|+|+|.+++|++ |+.||
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCR 274 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEE
Confidence 7 88999999999999999998 5678889999999999999999999998877 44443
No 26
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=9.2e-26 Score=203.12 Aligned_cols=208 Identities=20% Similarity=0.205 Sum_probs=155.2
Q ss_pred eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCC--eEEEEEeCCCcCeE
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVN 226 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~--~~~~~~~~h~~~v~ 226 (360)
...+.....+..|........++.++.+|.+.|++++|+| ++.+|+||+.|++|++||++++ .++..+.+|.+.|.
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~ 107 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN 107 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE
Confidence 3445666677777765555567889999999999999986 3789999999999999999987 46778889999999
Q ss_pred EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeE--ee-eCCCCCCC--------------------------CCCCCCCC
Q psy11015 227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWEC--LV-SNNDNDSD--------------------------LDESKEPD 275 (360)
Q Consensus 227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~--~~-~~~~~~~~--------------------------~~~~~~~~ 275 (360)
+++|+|+ +.+|++|+.|++|++||+..+... .. ...+.... ........
T Consensus 108 ~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 187 (316)
T 3bg1_A 108 SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC 187 (316)
T ss_dssp EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT
T ss_pred EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC
Confidence 9999998 789999999999999999875321 11 11111000 00111111
Q ss_pred CCccccc--------cceeEeeCCCCcEEEEEEcCCC----CEEEEEECCCcEEEEECCCC---e-EEEEEecCCCceEE
Q psy11015 276 ESSITLR--------TPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG---T-ILQSLTEPGEAIRA 339 (360)
Q Consensus 276 ~~~~~~~--------~~~~~~~~h~~~v~~i~~sp~g----~~l~tgs~dg~i~iwd~~~~---~-~~~~l~~h~~~v~~ 339 (360)
+.....+ .+...+.+|...|.+++|+|++ .+|++|+.||+|++||+.+. . ....+..|...|++
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~ 267 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWH 267 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEE
T ss_pred CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEE
Confidence 2221111 2456678999999999999986 89999999999999998762 1 22345678899999
Q ss_pred EEEcCCCCEEEccc-ccchh
Q psy11015 340 AAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 340 ~~~~~~g~~las~~-~~~ir 358 (360)
++|+|+|.+||++. |+.||
T Consensus 268 v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 268 VSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp EEECTTTCCEEEEESSSCEE
T ss_pred EEEcCCCCEEEEEcCCCeEE
Confidence 99999999888765 55554
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.9e-25 Score=216.82 Aligned_cols=160 Identities=32% Similarity=0.542 Sum_probs=145.9
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 247 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~ 247 (360)
..++.+..+.+|...|++++|+|++.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|++|+
T Consensus 414 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 414 RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 356788899999999999999999999999999999999996 5778889999999999999999999999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||.. + ..+..+.+|...|++++|+|+|++|++|+.||.|++||. +++++
T Consensus 493 iw~~~-~----------------------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~ 542 (577)
T 2ymu_A 493 LWNRN-G----------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 542 (577)
T ss_dssp EEETT-S----------------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE
T ss_pred EEcCC-C----------------------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEE
Confidence 99953 2 356778899999999999999999999999999999995 68899
Q ss_pred EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.++.+|...|++++|+|+|++|+|++ |+.||
T Consensus 543 ~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 543 QTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99999999999999999999888765 66665
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=1.1e-25 Score=200.67 Aligned_cols=160 Identities=16% Similarity=0.206 Sum_probs=137.0
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--CeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEE
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI 248 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~--~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~v 248 (360)
+..+.+|.+.|++++|+|++++|+||+.|++|+|||+.. ++++..+.+|.+.|++++|+| ++++|++|+.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 356789999999999999999999999999999999974 467889999999999999986 3899999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe-
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT- 325 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~- 325 (360)
||+.++. ...+..+.+|...|.+++|+|+ |.+|++|+.||+|++||++++.
T Consensus 82 Wd~~~~~--------------------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 82 WKEENGR--------------------------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp EEBSSSC--------------------------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred EEcCCCc--------------------------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence 9987652 1235567789999999999997 8999999999999999998763
Q ss_pred -EEEEEecCCCceEEEEEcCC-------------CCEEEccc-ccchh
Q psy11015 326 -ILQSLTEPGEAIRAAAGRTG-------------GPIRASPL-LLAIR 358 (360)
Q Consensus 326 -~~~~l~~h~~~v~~~~~~~~-------------g~~las~~-~~~ir 358 (360)
....+.+|...|.+++|+|+ +.++++++ |+.||
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~ 183 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEE
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEE
Confidence 24567889999999999997 45777665 55554
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=2.8e-25 Score=202.22 Aligned_cols=160 Identities=23% Similarity=0.293 Sum_probs=137.9
Q ss_pred eeeeeeeecCCCCEEEEEE-----CC-CCCEEEEEeCCCcEEEEECCC-------CeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015 170 CYKIRSFSGHRDGVWDVAV-----RP-GQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDL 236 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~-----~~-~~~~l~sgs~Dg~v~iwd~~~-------~~~~~~~~~h~~~v~~i~~~p~~~~ 236 (360)
..+..++.||.+.|++++| ++ ++++|+||+.|++|++||+.. +.+...+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3567789999999999999 76 889999999999999999874 3567789999999999999999999
Q ss_pred EEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcE
Q psy11015 237 VLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA 316 (360)
Q Consensus 237 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i 316 (360)
+++|+.|++|++||+.++ ..+..+.+|...|.+++|+|++++|++|+.||+|
T Consensus 91 l~s~s~D~~v~lwd~~~~----------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTG----------------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp EEEEETTSEEEEEETTSS----------------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred EEEEcCCCcEEEEECCCC----------------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 999999999999999876 3466788999999999999999999999999999
Q ss_pred EEEECCCCeEEEEEe---cCCCceEEEEEcCCC----------CEEEccc-ccchh
Q psy11015 317 NLFDVETGTILQSLT---EPGEAIRAAAGRTGG----------PIRASPL-LLAIR 358 (360)
Q Consensus 317 ~iwd~~~~~~~~~l~---~h~~~v~~~~~~~~g----------~~las~~-~~~ir 358 (360)
++||+.. ....... .|...|.+++|+|++ .++++++ |+.||
T Consensus 143 ~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 143 KLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp EEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred EEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 9999984 3444443 688899999999987 5666655 55543
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=8.4e-26 Score=208.65 Aligned_cols=171 Identities=20% Similarity=0.328 Sum_probs=142.5
Q ss_pred ccceeeeeee-----ecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015 167 LLSCYKIRSF-----SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQ-TGKCVLQYSGHSGSVNSVRFLPNKDLVLS 239 (360)
Q Consensus 167 ~~~~~~~~~l-----~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~h~~~v~~i~~~p~~~~l~s 239 (360)
..++..+..+ .+|...|.+++|++ ++.+|++|+.||+|++||++ .+.++..+.+|.+.|.+++|+|++.+|++
T Consensus 187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT 266 (380)
T ss_dssp TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE
Confidence 3455566666 68999999999987 78899999999999999998 55788999999999999999999999999
Q ss_pred EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEE
Q psy11015 240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 319 (360)
Q Consensus 240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iw 319 (360)
|+.|++|++||++++.....+.... .....+...|++++|+|+|++|++|+.||.|++|
T Consensus 267 ~s~D~~i~lwd~~~~~~~~~~~~~~---------------------~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 267 GSDDGTCRLFDMRTGHQLQVYNREP---------------------DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp ECSSSCEEEEETTTTEEEEEECCCC---------------------SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEecccc---------------------cccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 9999999999999875443321100 0011233458899999999999999999999999
Q ss_pred ECCCCeEEEEE----ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 320 DVETGTILQSL----TEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 320 d~~~~~~~~~l----~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+.+++.+..+ .+|.+.|++++|+|+|.+++|++ |+.||
T Consensus 326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 99999988887 67999999999999999999887 55554
No 31
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.5e-25 Score=208.26 Aligned_cols=172 Identities=23% Similarity=0.343 Sum_probs=150.5
Q ss_pred eecCCeEEEeeecCccc--eeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC-------eEEEEEeCCC
Q psy11015 153 KVQTSKIVSSFKTSLLS--CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHS 222 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~--~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~-------~~~~~~~~h~ 222 (360)
.+..+..+.+|...... ...+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++ .++..+.+|.
T Consensus 52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 34556667777754322 135667889999999999999 8999999999999999999987 6788999999
Q ss_pred cCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEE
Q psy11015 223 GSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAAD 299 (360)
Q Consensus 223 ~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~ 299 (360)
..|.+++|+|++ .+|++|+.|++|++||+.++. .+..+ .+|...|.+++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------------------------~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----------------------------AVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----------------------------EEEEECTTTCCSCEEEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----------------------------ccEEEecCCCCCceEEEE
Confidence 999999999998 699999999999999998763 35556 68999999999
Q ss_pred EcCCCCEEEEEECCCcEEEEECCCCeEEEEE-ecCCCc-eEEEEEcCCCCEEEcc
Q psy11015 300 WLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEA-IRAAAGRTGGPIRASP 352 (360)
Q Consensus 300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~h~~~-v~~~~~~~~g~~las~ 352 (360)
|+|+|++|++|+.||.|++||+++++.+..+ ..|.+. +.+++|+|+|.+++++
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 9999999999999999999999999999998 678765 8999999999999987
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=3.7e-25 Score=219.98 Aligned_cols=183 Identities=21% Similarity=0.303 Sum_probs=156.5
Q ss_pred eeeecCCeEEEeeecCc---cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE
Q psy11015 151 KLKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 227 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~ 227 (360)
...+...+.+..|.... ..+...+.+.+|.+.|.+++|+|++++|+||+.||+|+|||+.++.++..+.+|.+.|.+
T Consensus 398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~ 477 (694)
T 3dm0_A 398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS 477 (694)
T ss_dssp EEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEE
Confidence 34566666777776543 234567889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC--C
Q psy11015 228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--E 305 (360)
Q Consensus 228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g--~ 305 (360)
++|+|++++|++|+.|++|++||+....... ......+|...|.+++|+|++ .
T Consensus 478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-------------------------~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDRTIKLWNTLGECKYT-------------------------ISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEE-------------------------ECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEeCCCCEEEEEeCCCEEEEEECCCCccee-------------------------eccCCCCCCCcEEEEEEeCCCCcc
Confidence 9999999999999999999999976431111 111224788999999999987 5
Q ss_pred EEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 306 QVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 306 ~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.+++|+.||+|++||++++++...+.+|.+.|++++|+|+|.++++++ |+.||
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 586 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 899999999999999999999999999999999999999999998876 55554
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=4.5e-25 Score=216.32 Aligned_cols=203 Identities=19% Similarity=0.209 Sum_probs=160.3
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-------CCCcCeE
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-------GHSGSVN 226 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-------~h~~~v~ 226 (360)
+.....+..|. ...++++.++.+|.+.|++++|+|++.+|+||+.|++|++||+.+++++..+. +|.+.|.
T Consensus 166 ~s~D~~v~lwd--~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 166 GSDDNTVAIFE--GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EETTSCEEEEE--TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EeCCCeEEEEE--CCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 33344444454 34567888999999999999999999999999999999999999999988884 7999999
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCC----------CCCCCCCCC-----ccccccceeEeeCC
Q psy11015 227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDL----------DESKEPDES-----SITLRTPVKELLGH 291 (360)
Q Consensus 227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~~~~~h 291 (360)
+++|+|+|++|++|+.|++|++||+.++.............. .......+. ......+...+.+|
T Consensus 244 ~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh 323 (611)
T 1nr0_A 244 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH 323 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCC
Confidence 999999999999999999999999998866554332110000 000000000 01112345667899
Q ss_pred CCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 292 ~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
...|++++|+|+|++|++|+.||+|++||+.++.+...+ .+|...|.+++|++++.+++.+.|..+|
T Consensus 324 ~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~ 391 (611)
T 1nr0_A 324 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLK 391 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceE
Confidence 999999999999999999999999999999999887766 5699999999999999888887777654
No 34
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=3.4e-25 Score=203.53 Aligned_cols=175 Identities=16% Similarity=0.140 Sum_probs=143.2
Q ss_pred CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeC
Q psy11015 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~ 233 (360)
....+.+|.. .++.++.++. |.+.|++++|+|+|.++++++.| .+++|+..++..+. ...+|...|.+++|+|+
T Consensus 155 ~d~~i~iwd~--~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 155 VPAIMRIIDP--SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp SSCEEEEEET--TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred CCCEEEEeEC--CCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence 3455555654 4556666665 77899999999999999999855 56667777776554 34568889999999999
Q ss_pred CCEEEEEeCCC----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 234 KDLVLSASGDK----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 234 ~~~l~s~s~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
+.++++++.|+ ++++|++....... .....+.+|...|++++|+|+|++||+
T Consensus 231 g~~l~~~s~d~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 231 DTVLIAASLKKGKGIVLTKISIKSGNTSV------------------------LRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp TEEEEEEEESSSCCEEEEEEEEETTEEEE------------------------EEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred CCEEEEEecCCcceeEEeecccccceecc------------------------eeeeeecCCCCCeEeEEECCCCCceEE
Confidence 99999999887 58889877653321 135667889999999999999999999
Q ss_pred EECCCcEEEEECCCCeEEEEE-ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 310 ASWDRVANLFDVETGTILQSL-TEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~~~~l-~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+.||+|+|||+.+++++..+ .+|..+|++++|+|+|++|||++ |++||
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999999999999886 68999999999999999999876 66665
No 35
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=3.9e-25 Score=201.49 Aligned_cols=203 Identities=16% Similarity=0.175 Sum_probs=157.4
Q ss_pred eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE-
Q psy11015 152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF- 230 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~- 230 (360)
+.+..+..+..|............+.+|.+.|++++|+|++.+|++|+.||.|++||+.+++.+. +.+|.+.|.+++|
T Consensus 58 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 58 IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI 136 (368)
T ss_dssp EEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence 34455566667776654455558899999999999999999999999999999999999998776 4559999999999
Q ss_pred -eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC----------------------------------------CC
Q psy11015 231 -LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD----------------------------------------LD 269 (360)
Q Consensus 231 -~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~----------------------------------------~~ 269 (360)
+|++.+|++++.|+.|++||++++........+.... ..
T Consensus 137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR 216 (368)
T ss_dssp ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence 8899999999999999999998775443332221000 00
Q ss_pred --------------CCCCCCCCccccc--------cceeEeeCCCC------------cEEEEEEcCCCCEEEEEECCCc
Q psy11015 270 --------------ESKEPDESSITLR--------TPVKELLGHSN------------VVIAADWLSDGEQVITASWDRV 315 (360)
Q Consensus 270 --------------~~~~~~~~~~~~~--------~~~~~~~~h~~------------~v~~i~~sp~g~~l~tgs~dg~ 315 (360)
......+.....+ .....+.+|.. .|++++|+|++++|++|+.||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 296 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR 296 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence 0000001100110 34456667765 6999999999999999999999
Q ss_pred EEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015 316 ANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL 355 (360)
Q Consensus 316 i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~ 355 (360)
|++||+.+++++..+..|..+|++++|+|+|.++++++..
T Consensus 297 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 297 FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 9999999999999999999999999999999998888643
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=1.2e-24 Score=201.82 Aligned_cols=148 Identities=24% Similarity=0.409 Sum_probs=132.7
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSN 261 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 261 (360)
.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++..
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~----- 199 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC----- 199 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee-----
Confidence 499999999999999999999999999999999999999999999999999999999999999999999987732
Q ss_pred CCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEE-------ecC
Q psy11015 262 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-------TEP 333 (360)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l-------~~h 333 (360)
...+. +...+.+++|+| +|++|++|+.||.|++||++++..+..+ .+|
T Consensus 200 -----------------------~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 200 -----------------------SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp -----------------------EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC
T ss_pred -----------------------EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC
Confidence 22332 556799999999 8999999999999999999999988777 578
Q ss_pred CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 334 GEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 334 ~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
...|++++|+|+|.++++++ |+.||
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 99999999999999888876 55443
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.1e-24 Score=196.39 Aligned_cols=207 Identities=18% Similarity=0.204 Sum_probs=158.2
Q ss_pred eeecCCeEEEeeecCcc--ceeeeeeeecCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCC---------eEEEEE
Q psy11015 152 LKVQTSKIVSSFKTSLL--SCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG---------KCVLQY 218 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~---------~~~~~~ 218 (360)
+.+..+..+..|..... ....+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++ +++..+
T Consensus 27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 27 ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred EEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 34555666777776543 3467888999999999999999 5899999999999999999887 678889
Q ss_pred eCCCcCeEEEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCC-------------CCCCCCCCCCCC---------
Q psy11015 219 SGHSGSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNN-------------DNDSDLDESKEP--------- 274 (360)
Q Consensus 219 ~~h~~~v~~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-------------~~~~~~~~~~~~--------- 274 (360)
.+|.+.|.+++|+|+ +.++++++.|+.|++||+.++........ +..........+
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 999999999999999 99999999999999999987643221110 000000000000
Q ss_pred ---CCCc-------cccccceeEeeCCCCcEEEEEEcCCC----CEEEEEECCCcEEEEECCCC----------------
Q psy11015 275 ---DESS-------ITLRTPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG---------------- 324 (360)
Q Consensus 275 ---~~~~-------~~~~~~~~~~~~h~~~v~~i~~sp~g----~~l~tgs~dg~i~iwd~~~~---------------- 324 (360)
.... .........+.+|...|++++|+|++ ++|++|+.||.|++||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 0000 00111356677899999999999998 89999999999999999875
Q ss_pred ------------------------------eEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 325 ------------------------------TILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 325 ------------------------------~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
..+..+.+|...|++++|+|+|+++++++ |+.||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 67788889999999999999999888776 55453
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=1.6e-24 Score=200.90 Aligned_cols=180 Identities=21% Similarity=0.355 Sum_probs=146.2
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee-
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP- 232 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p- 232 (360)
+..+..+..|.. .++..+..+.+|.+.|++++|+|++..|++|+.|++|++||+.++++...+. +...+.+++|+|
T Consensus 141 ~~~d~~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDI--ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EcCCCeEEEEEC--CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 334444444543 4567888999999999999999999999999999999999999999988887 667899999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312 (360)
Q Consensus 233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~ 312 (360)
++.++++|+.|++|++||+.++....... .......+|...|.+++|+|+|++|++|+.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~---------------------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLD---------------------SENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC---------------------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeec---------------------ccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 89999999999999999998774332210 111223579999999999999999999999
Q ss_pred CCcEEEEECCC------------CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 313 DRVANLFDVET------------GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 313 dg~i~iwd~~~------------~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
||+|++||+++ +.+...+.+|...|.+++|+|++.++++++ |+.|
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999975 345667889999999999999999988876 4444
No 39
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=2.7e-25 Score=202.53 Aligned_cols=181 Identities=14% Similarity=0.156 Sum_probs=139.1
Q ss_pred ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE----EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252 (360)
Q Consensus 177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~----~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~ 252 (360)
..|...|.+++|+|++ .|++|+.||+|+|||+.+++++.. +.+|.+.|++++|+|+|++|++|+.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 4567889999999986 788999999999999998865443 45899999999999999999999999999999999
Q ss_pred cCeeEeeeCCCCCCCCCCCC----------CCCCCc-----cccccceeEee--CCCCcEEEEEEcCC-CCEEEEEECCC
Q psy11015 253 INWECLVSNNDNDSDLDESK----------EPDESS-----ITLRTPVKELL--GHSNVVIAADWLSD-GEQVITASWDR 314 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~--~h~~~v~~i~~sp~-g~~l~tgs~dg 314 (360)
++.....+..+......... ...+.. .....+...+. .|...+.+++|+|+ +++|++|+.||
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 99877766655332211111 111111 12233444443 45567999999995 57889999999
Q ss_pred cEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015 315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR 358 (360)
Q Consensus 315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir 358 (360)
+|++||+++++++.++.+|...|++++|+|+| .++||++ |+.||
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 99999999999999999999999999999998 5777664 66654
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=7.3e-26 Score=208.04 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=143.6
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEE
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRF 230 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~ 230 (360)
+..+..+..|.........+..+.+|.+.|++++|+|++++|++|+.||+|++||+.++. +...+.+|...|.+++|
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 334445555655544447888999999999999999999999999999999999999877 77788899999999999
Q ss_pred eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEE
Q psy11015 231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~t 309 (360)
+|++++|++|+.|++|++||+.++.. ......+.+ |...|.+++|+|++++|++
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQEND-------------------------WWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC------------------------------CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCCCEEEEEecCCeEEEEEECCccc-------------------------ceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99999999999999999999886621 113556666 9999999999999999999
Q ss_pred EECCCcEEEEECC------------------CCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 310 ASWDRVANLFDVE------------------TGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~------------------~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+.||.|++||+. .++++..+ +|...|++++|+|+|.+++++. |+.||
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVT 230 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence 9999999999985 46677777 8999999999999999888775 54554
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.9e-25 Score=205.30 Aligned_cols=192 Identities=11% Similarity=0.055 Sum_probs=147.4
Q ss_pred cCCeEEEeeecCccc-eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeC-CCcCeEEEE
Q psy11015 155 QTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSG-HSGSVNSVR 229 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~-h~~~v~~i~ 229 (360)
..+..+..|...... ......+.+|.+.|++++|+|++.+|++|+.|++|++||++++. +...+.+ |.+.|.+++
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 334444445444333 34677888999999999999999999999999999999999886 4778888 999999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|++++|++|+.|++|++||+..+..... ..............++..+ +|...|.+++|+|+|++|++
T Consensus 154 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~ 222 (377)
T 3dwl_C 154 WHPNNVLLAAGCADRKAYVLSAYVRDVDAK----------PEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY 222 (377)
T ss_dssp ECTTSSEEEEEESSSCEEEEEECCSSCC-C----------CCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE
T ss_pred EcCCCCEEEEEeCCCEEEEEEEEecccCCC----------ccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE
Confidence 999999999999999999999865421100 0000011111233455566 89999999999999999999
Q ss_pred EECCCcEEEEECCCCeE----EEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015 310 ASWDRVANLFDVETGTI----LQSLTEPGEAIRAAAGRTGGPIRASPLLLAI 357 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~----~~~l~~h~~~v~~~~~~~~g~~las~~~~~i 357 (360)
|+.||.|++||+.++.. +..+.+|..+|++++|+|+|.+++++.+..+
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 223 AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 99999999999999887 7888999999999999999999999987654
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=3.1e-25 Score=208.46 Aligned_cols=177 Identities=14% Similarity=0.027 Sum_probs=146.5
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC--CCcCeEEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVR 229 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~--h~~~v~~i~ 229 (360)
.|..++.+.+|+...........+.+|.+.|++|+|+| ++.+|+|||.||+|++||++++........ +...+.+++
T Consensus 137 sGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 137 VGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLD 216 (435)
T ss_dssp EEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred EEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence 45666777788877777777778899999999999998 678999999999999999987655444433 334578999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVI 308 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~ 308 (360)
|+|++.+|++|+.||+|++||+... .+..+.+|...|.+++|+|++. +++
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~-----------------------------~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGK-----------------------------ELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSC-----------------------------BCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcc-----------------------------eeEEEecccceEEeeeecCCCceEEE
Confidence 9999999999999999999998643 4556778999999999999886 788
Q ss_pred EEECCCcEEEEECCCCeEEEEE---ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 309 TASWDRVANLFDVETGTILQSL---TEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 309 tgs~dg~i~iwd~~~~~~~~~l---~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+|+.||.|++||+++++....+ .+|...|++++|+|+|.+|+|++ |+.||
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence 9999999999999887654333 57899999999999999888776 45443
No 43
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.2e-25 Score=213.68 Aligned_cols=157 Identities=9% Similarity=-0.044 Sum_probs=135.8
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-eEEEEEeCCCcCeEEE--EEeeCC-CEEEEEeCCCcEEE
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSV--RFLPNK-DLVLSASGDKSVHI 248 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-~~~~~~~~h~~~v~~i--~~~p~~-~~l~s~s~d~~i~v 248 (360)
..++.+|.+.|++++|++++ .|++|+.||+|++||++++ .+...+.+|.+.|.+| .|+|+| .+|+|||.|++|+|
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 35788999999999999865 8999999999999999976 4566789999999999 567887 89999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC--cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTI 326 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~ 326 (360)
||++++ .+...+.+|.. .|.+++|+|++..+++++.|++|++||++++.+
T Consensus 338 WD~~~~----------------------------~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 338 FNPKDI----------------------------ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp ECGGGH----------------------------HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred EECCCC----------------------------CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc
Confidence 999865 23344555543 578999999999999999999999999999998
Q ss_pred EEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 327 LQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 327 ~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+.++.+|.+.|++++|+|+|++++|++ |+.||
T Consensus 390 ~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 390 VHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp CEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred ceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 889999999999999999999888776 55554
No 44
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.5e-24 Score=193.20 Aligned_cols=165 Identities=10% Similarity=-0.072 Sum_probs=127.9
Q ss_pred cceeeeeeeecCCCCEEEEEECC---CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---cCeEEEEEeeCCCEE----
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS---GSVNSVRFLPNKDLV---- 237 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~---~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~---~~v~~i~~~p~~~~l---- 237 (360)
..++.+..+.+|...+..++|++ ++..|+|||.|++|+|||+.+|++++++.+|. ..+.+++|+|+|.++
T Consensus 166 ~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 166 EDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred CCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 34667777778888888888887 66899999999999999999999999998754 368888999999876
Q ss_pred --------EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcCCCCEEE
Q psy11015 238 --------LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDGEQVI 308 (360)
Q Consensus 238 --------~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~g~~l~ 308 (360)
++|+.|++|++||..++...... ... -.+|...+.+.++ ++.+++
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~v~------------------------~~~~p~Gh~~~~lsg~~--sg~~lA 299 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSVGVM------------------------LYCLPPGQAGRFLEGDV--KDHCAA 299 (356)
T ss_dssp ------------CCEEEEEEETTTTEEEEEE------------------------EECCCTTCCCCEEEEEE--ETTEEE
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEEEEE------------------------EeeccCCCcceeEcccc--CCCEEE
Confidence 56888999999999887443210 000 1366666555555 488999
Q ss_pred EEECCCcEEEEECCCCeEEEEEecCCCceE-EEEEcCCCCEEEccc-ccchh
Q psy11015 309 TASWDRVANLFDVETGTILQSLTEPGEAIR-AAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 309 tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~-~~~~~~~g~~las~~-~~~ir 358 (360)
+|+.||+|+|||+.+|++++++.+|...+. .++|+|+|++++|++ |++||
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIk 351 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIF 351 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEE
Confidence 999999999999999999999999887655 589999999998877 55665
No 45
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=5e-24 Score=206.73 Aligned_cols=160 Identities=32% Similarity=0.503 Sum_probs=145.3
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 247 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~ 247 (360)
.++.++..+.+|...|.+++|+|++++|++|+.|+.|++||. +++.+..+.+|...|.+++|+|+++++++++.|++|+
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 373 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence 356778899999999999999999999999999999999995 5788899999999999999999999999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||... ..+..+.+|...|.+++|+|+|++|++++.|+.|++||. +++++
T Consensus 452 ~w~~~~-----------------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~ 501 (577)
T 2ymu_A 452 LWNRNG-----------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 501 (577)
T ss_dssp EEETTS-----------------------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEE
T ss_pred EEECCC-----------------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEE
Confidence 999643 246678899999999999999999999999999999994 78899
Q ss_pred EEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
..+.+|...|++++|+|+|++||++. |+.||
T Consensus 502 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence 99999999999999999999988876 44454
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.9e-24 Score=194.59 Aligned_cols=179 Identities=23% Similarity=0.305 Sum_probs=155.0
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSV 228 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i 228 (360)
.+..+..+.+|......+..+..+.+|.+.|++++|+++ +.+|++|+.||.|++||+.+++ .+..+.+|...|.++
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 445566677777776788899999999999999999987 8999999999999999999987 788888999999999
Q ss_pred EEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC----
Q psy11015 229 RFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS---- 302 (360)
Q Consensus 229 ~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp---- 302 (360)
+|+|+ +.++++++.|+.|++||+..+.. .....+.+|...|.+++|+|
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTSC--------------------------CCEEEEECCTTCEEEEEECCCC--
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCCc--------------------------eeeEEecCCCCceEEEEEcCcccc
Confidence 99999 99999999999999999986521 13445678999999999999
Q ss_pred ---------CCCEEEEEECCCcEEEEECCCCe----EEEEEecCCCceEEEEEcCC---CCEEEccc-ccch
Q psy11015 303 ---------DGEQVITASWDRVANLFDVETGT----ILQSLTEPGEAIRAAAGRTG---GPIRASPL-LLAI 357 (360)
Q Consensus 303 ---------~g~~l~tgs~dg~i~iwd~~~~~----~~~~l~~h~~~v~~~~~~~~---g~~las~~-~~~i 357 (360)
++.++++|+.||.|++||++++. .+..+.+|...|++++|+|+ +.+++++. ++.|
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 69999999999999999998653 55678889999999999999 88888776 4444
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.3e-24 Score=193.09 Aligned_cols=188 Identities=18% Similarity=0.222 Sum_probs=152.3
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
.......+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCC---------C-----Ccc----------------ccccceeEeeCCCC--cEE
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPD---------E-----SSI----------------TLRTPVKELLGHSN--VVI 296 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~----------------~~~~~~~~~~~h~~--~v~ 296 (360)
||+.++.......... ........+. . ... ....+...+..|.. .+.
T Consensus 101 wd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPV-PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEECSS-CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEeecCC-CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999887665544211 1000000000 0 100 01124455556666 899
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 297 AADWLSDGEQVITASWDRVANLFDVET-GTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
+++|+|+++++++|+.||.|++||+++ +..+..+..|...|.+++|+|++.+++++. ++.|
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 242 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS 242 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence 999999999999999999999999998 788999999999999999999999888776 4444
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=2.2e-25 Score=200.66 Aligned_cols=146 Identities=21% Similarity=0.255 Sum_probs=122.0
Q ss_pred eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEEEE
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIW 249 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vw 249 (360)
..+.+|.+.|++++|+|++++|+||+.|++|+|||+.++. ++..+.+|.+.|++++|+| ++++|++|+.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3457999999999999999999999999999999998874 5678999999999999985 48899999999999999
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCeE-
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI- 326 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~~- 326 (360)
|+.++. ......+.+|...|.+++|+|+ |.+|++|+.||+|++||++++..
T Consensus 87 d~~~~~--------------------------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 87 REENGT--------------------------WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp CCSSSC--------------------------CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred ECCCCc--------------------------ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 987652 1235567789999999999998 78999999999999999987632
Q ss_pred --EEEEecCCCceEEEEEcCC
Q psy11015 327 --LQSLTEPGEAIRAAAGRTG 345 (360)
Q Consensus 327 --~~~l~~h~~~v~~~~~~~~ 345 (360)
...+.+|...|.+++|+|+
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCC
T ss_pred ceeeeeccccCCcceEEEccc
Confidence 3455679999999999997
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=2e-24 Score=201.22 Aligned_cols=198 Identities=14% Similarity=0.093 Sum_probs=150.7
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+.....+..|. ...+.....+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+|+
T Consensus 115 ~~~dg~i~iwd--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 115 GTTEGDIKVLD--SNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp EETTSCEEEEC--TTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETT
T ss_pred EECCCCEEEEe--CCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC
Confidence 33344444454 3466778888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 313 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d 313 (360)
+++|++|+.|++|++||++++................... .............|...+.+++|+|+|++|++|+.|
T Consensus 193 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 193 GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI----ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE----EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE----EEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9999999999999999999886555433221110000000 000000000112245667778889999999999999
Q ss_pred CcEEEEECCCCeEEEEEe-cCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015 314 RVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGP-IRASPL-LLAI 357 (360)
Q Consensus 314 g~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~~~g~-~las~~-~~~i 357 (360)
|.|++||+++++.+..+. .|...|++++|+|++. +++++. ++.|
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i 315 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGML 315 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeE
Confidence 999999999998887775 4788999999999998 777766 4444
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=2.3e-23 Score=186.28 Aligned_cols=202 Identities=15% Similarity=0.177 Sum_probs=145.2
Q ss_pred CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-----------------
Q psy11015 157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----------------- 219 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~----------------- 219 (360)
+..+.+|+...........+.+|...|++++|+|++++|++|+.||+|++||+.+++++..+.
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~ 123 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 123 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEE
Confidence 455666665543333333445788899999999999999999999999999999887765543
Q ss_pred ------------------------CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee----eCCCCCCCCCCC
Q psy11015 220 ------------------------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV----SNNDNDSDLDES 271 (360)
Q Consensus 220 ------------------------~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~----~~~~~~~~~~~~ 271 (360)
+|...+..+.|++++.++++++.|++|++||+.++..... ............
T Consensus 124 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 203 (318)
T 4ggc_A 124 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 203 (318)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEE
T ss_pred EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEE
Confidence 4566778888888999999999999999999987642211 111100000000
Q ss_pred ------------CCCCCCcccc----ccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEEecC
Q psy11015 272 ------------KEPDESSITL----RTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTEP 333 (360)
Q Consensus 272 ------------~~~~~~~~~~----~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l~~h 333 (360)
.......... .........+...+..+.|+|++..+++++ .||.|++||+.+++++.++.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH 283 (318)
T 4ggc_A 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH 283 (318)
T ss_dssp ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred ecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC
Confidence 0001111111 112223345677899999999999988765 7999999999999999999999
Q ss_pred CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 334 GEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 334 ~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.+.|++++|+|+|.+|||++ |+.||
T Consensus 284 ~~~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 284 TSRVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp SSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred CCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999888776 56665
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=6.4e-24 Score=191.40 Aligned_cols=166 Identities=19% Similarity=0.193 Sum_probs=137.3
Q ss_pred eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCCcEE
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVH 247 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~~i~ 247 (360)
..+.+|.+.|++++|+|++++|++|+.||+|++||+.++ +....+.+|.+.|.+++|+| ++.+|++|+.|++|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456799999999999999999999999999999999876 57788899999999999999 699999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT 325 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~ 325 (360)
+||+..+.... ......++..+.+|...|.+++|+|+ +.++++|+.||.|++||+++++
T Consensus 85 vwd~~~~~~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 85 LWEEDPDQEEC-------------------SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEECTTSCTT-------------------SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEecCCCcccc-------------------cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99998652110 00112356777889999999999999 9999999999999999986543
Q ss_pred ------------------------------------------------------------EEEEEecCCCceEEEEEcCC
Q psy11015 326 ------------------------------------------------------------ILQSLTEPGEAIRAAAGRTG 345 (360)
Q Consensus 326 ------------------------------------------------------------~~~~l~~h~~~v~~~~~~~~ 345 (360)
.+..+.+|...|++++|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence 14456678889999999999
Q ss_pred C----CEEEccc-ccchh
Q psy11015 346 G----PIRASPL-LLAIR 358 (360)
Q Consensus 346 g----~~las~~-~~~ir 358 (360)
+ .+++++. |+.||
T Consensus 226 ~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSSEEEEEEETTSCEE
T ss_pred CCCcceEEEEEcCCCeEE
Confidence 8 6777665 45443
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.4e-24 Score=196.22 Aligned_cols=163 Identities=17% Similarity=0.193 Sum_probs=140.1
Q ss_pred eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEeeC--CCEEEEEeCCCc
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKS 245 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~p~--~~~l~s~s~d~~ 245 (360)
|.++..+.+|.+.|++++|+|++++|++|+.||.|++||+. ++..+..+.+|.+.|.+++|+|+ +++|++|+.|+.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 35677899999999999999999999999999999999998 56788889999999999999977 899999999999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCC
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVET 323 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~ 323 (360)
|++||+.++.. .....+.+|...|.+++|+|+ +.++++|+.||.|++||+.+
T Consensus 81 v~iwd~~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 81 VLIWKEENGRW--------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp EEEEEEETTEE--------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred EEEEEcCCCce--------------------------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 99999987631 145667789999999999999 99999999999999999988
Q ss_pred Ce--EEEEEecCCCceEEEEEcC-------------CCCEEEccc-ccchh
Q psy11015 324 GT--ILQSLTEPGEAIRAAAGRT-------------GGPIRASPL-LLAIR 358 (360)
Q Consensus 324 ~~--~~~~l~~h~~~v~~~~~~~-------------~g~~las~~-~~~ir 358 (360)
+. ....+..|...|++++|+| ++.+++++. ++.||
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 185 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 185 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEE
Confidence 73 4456778999999999999 688777766 44443
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=8.1e-24 Score=193.47 Aligned_cols=195 Identities=15% Similarity=0.067 Sum_probs=154.4
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCCCcCeEEEE
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVR 229 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~----~~~~~~~h~~~v~~i~ 229 (360)
+..+..+..|............+.+|...|.+++|+|++++|++|+.||.|++||+..+. ......+|...|.+++
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 334445555555444444555668899999999999999999999999999999998875 2333367899999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|++++|++|+.|+.|++||+........ ..............++..+.+|...|.+++|+|++++|++
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEER----------PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCC----------CCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEccccccccc----------ccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence 999999999999999999999764311000 0000000011234566777789999999999999999999
Q ss_pred EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
|+.||.|++||+++++.+..+..|..+|++++|+|+|.+++++.++.|+
T Consensus 220 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~ 268 (372)
T 1k8k_C 220 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPV 268 (372)
T ss_dssp EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCE
T ss_pred EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEE
Confidence 9999999999999999999999999999999999999999999887664
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=3.3e-23 Score=189.45 Aligned_cols=181 Identities=14% Similarity=0.146 Sum_probs=151.6
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE--EeCCCcCeEEEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRF 230 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~--~~~h~~~v~~i~~ 230 (360)
.+..+..+..|.........+..+.+|.+.|.+++|+|++.+|++|+.||.|++||+.+++.... +.+|...|.+++|
T Consensus 25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 34455666677766555558899999999999999999999999999999999999998875444 4679999999999
Q ss_pred eeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015 231 LPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 310 (360)
Q Consensus 231 ~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg 310 (360)
+|++++|++|+.|+.|++||+..+.... .......+|...|.+++|+|++++|++|
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQENDWW------------------------VCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTTTEE------------------------EEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCCcce------------------------eeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9999999999999999999998662110 0122335788999999999999999999
Q ss_pred ECCCcEEEEEC------------------CCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 311 SWDRVANLFDV------------------ETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 311 s~dg~i~iwd~------------------~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
+.||.|++||+ .+++.+..+..|...|++++|+|+|.+++++. ++.|
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 99999999995 47889999999999999999999999888776 4444
No 55
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.6e-24 Score=192.62 Aligned_cols=178 Identities=8% Similarity=-0.017 Sum_probs=138.3
Q ss_pred eeeecCCeEEEeeecCc-------cceeeeeeee-cCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy11015 151 KLKVQTSKIVSSFKTSL-------LSCYKIRSFS-GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSG 220 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~h~~~V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~ 220 (360)
.+.+.....+..|.... .+...++.+. +|.+.|.+++|+| +++++++|+.||+|++||+++++++..+..
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 34455555666665432 2444455554 7889999999999 999999999999999999999998777744
Q ss_pred -CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccce-eEeeC-CCCcEEE
Q psy11015 221 -HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPV-KELLG-HSNVVIA 297 (360)
Q Consensus 221 -h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-h~~~v~~ 297 (360)
|...|.+++|+|+|.+|++|+.|++|++||++++. .. ..+.+ |.+.|++
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~----------------------------~~~~~~~~~h~~~v~~ 219 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD----------------------------QASSRFPVDEEAKIKE 219 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT----------------------------SCCEECCCCTTSCEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC----------------------------CCccEEeccCCCCEEE
Confidence 45589999999999999999999999999998762 23 45666 9999999
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---CCCce--EEEEEcCCCCEEEccc--ccch
Q psy11015 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLTE---PGEAI--RAAAGRTGGPIRASPL--LLAI 357 (360)
Q Consensus 298 i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~---h~~~v--~~~~~~~~g~~las~~--~~~i 357 (360)
++|+|+|.+|++|+ |+.|++||+++++.+..+.. |...+ .+++|+|+|.++++++ ++.|
T Consensus 220 l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i 285 (343)
T 3lrv_A 220 VKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSL 285 (343)
T ss_dssp EEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcE
Confidence 99999999999999 55999999998876655443 33344 3699999999999844 5544
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=1.8e-23 Score=192.65 Aligned_cols=161 Identities=11% Similarity=0.060 Sum_probs=139.8
Q ss_pred cceeeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEee-CCCEEEEEeCC
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLP-NKDLVLSASGD 243 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p-~~~~l~s~s~d 243 (360)
........+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.....+. +|.+.|.+++|+| ++.+|++++.|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 3456677889999999999999998 899999999999999999887777765 6999999999999 77999999999
Q ss_pred CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe---eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015 244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQVITASWDRVANLFD 320 (360)
Q Consensus 244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd 320 (360)
++|++||+... ....+ .+|...|.+++|+|++++|++|+.||.|++||
T Consensus 141 ~~i~iwd~~~~-----------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 141 GATTLRDFSGS-----------------------------VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp TEEEEEETTSC-----------------------------EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CEEEEEECCCC-----------------------------ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 99999999753 22333 34558899999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015 321 VETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR 358 (360)
Q Consensus 321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir 358 (360)
+ +++.+..+.+|...|++++|+|++. ++++++ |+.||
T Consensus 192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp T-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred C-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 8 5888999999999999999999998 777665 44443
No 57
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=1.4e-24 Score=201.52 Aligned_cols=205 Identities=14% Similarity=0.051 Sum_probs=137.7
Q ss_pred eecCCeEEEeeecCccc---eeeeeeeecCCCCEEEEEECC--------CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC
Q psy11015 153 KVQTSKIVSSFKTSLLS---CYKIRSFSGHRDGVWDVAVRP--------GQPVLGSASADRTVRLWSTQTGKCVLQYSGH 221 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---~~~~~~l~~h~~~V~~l~~~~--------~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h 221 (360)
.+.....+..|...... ...+..+.||.+.|++++|+| ++++|+|||.|++|+|||+.++.++..+.+|
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~ 185 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL 185 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence 34455556666654433 234567889999999999997 7889999999999999999999888888889
Q ss_pred CcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCC----------------C----------CCC
Q psy11015 222 SGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDE----------------S----------KEP 274 (360)
Q Consensus 222 ~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~----------------~----------~~~ 274 (360)
.+.|.+++|+|++ .+|++|+.|++|++||+.++................ . ..+
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~ 265 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS 265 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence 9999999999987 489999999999999998875433221110000000 0 000
Q ss_pred ---------CCCcc-----ccccceeEeeCCCCcEEEE------------------EEcC--CCCEEEEEECCCcEEEEE
Q psy11015 275 ---------DESSI-----TLRTPVKELLGHSNVVIAA------------------DWLS--DGEQVITASWDRVANLFD 320 (360)
Q Consensus 275 ---------~~~~~-----~~~~~~~~~~~h~~~v~~i------------------~~sp--~g~~l~tgs~dg~i~iwd 320 (360)
.+... ........+..|...+..+ .|+| ++.++++|+.||+|++||
T Consensus 266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp TTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence 00000 0011112222333333222 2333 334667888999999999
Q ss_pred CCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccch
Q psy11015 321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAI 357 (360)
Q Consensus 321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~i 357 (360)
+.++..+..+..|..+|++++|+|+|++||+++++++
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 9999988888889999999999999999999998775
No 58
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.9e-23 Score=183.07 Aligned_cols=171 Identities=22% Similarity=0.388 Sum_probs=151.1
Q ss_pred eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCeEEEE
Q psy11015 152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVR 229 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~ 229 (360)
+.+..+..+..|. ....+..+.+|.+.|.+++|.| +++.+++++.||.|++|| .+.....+.. |...|.+++
T Consensus 118 ~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 118 ISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp EEEETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE
T ss_pred EEEeCCCCEEEEc----CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE
Confidence 3444455555665 5678888999999999999988 888999999999999999 5677788887 999999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|++. +++++.|+.|++||+.++ .++..+.+|...|.+++|+|++ .+++
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~-~l~~ 241 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTG----------------------------DVLRTYEGHESFVYCIKLLPNG-DIVS 241 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTC----------------------------CEEEEEECCSSCEEEEEECTTS-CEEE
T ss_pred EcCCCe-EEEccCCCeEEEEECCch----------------------------hhhhhhhcCCceEEEEEEecCC-CEEE
Confidence 999998 999999999999999866 3566778899999999999999 6999
Q ss_pred EECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 310 ASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
|+.||.|++||+.+++.+..+..|...|++++|+|+|.+++++.++.||
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~ 290 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVR 290 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred EecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEE
Confidence 9999999999999999999999999999999999999999888887765
No 59
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=3.1e-23 Score=191.07 Aligned_cols=176 Identities=10% Similarity=0.017 Sum_probs=147.7
Q ss_pred eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC---CcCeE
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVN 226 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h---~~~v~ 226 (360)
.+.+..+..+..|............+.+|.+.|.+++|+| ++.+|++|+.|+.|++||+.. ..+..+..| ...|.
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~ 167 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYC 167 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEE
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeE
Confidence 3345556667777777655555555668999999999999 678999999999999999985 555666544 47899
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-
Q psy11015 227 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE- 305 (360)
Q Consensus 227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~- 305 (360)
+++|+|++++|++|+.|+.|++||+.. .++..+.+|...|.+++|+|+++
T Consensus 168 ~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------------------------~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDSTGRLLLLGLDG-----------------------------HEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTS-----------------------------CEEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCC-----------------------------CEEEEeccCCCcEEEEEECCCCCC
Confidence 999999999999999999999999842 25677889999999999999999
Q ss_pred EEEEEECCCcEEEEECCC----CeEEEEEecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015 306 QVITASWDRVANLFDVET----GTILQSLTEPGEAIRAAAGRT-GGPIRASPL-LLAI 357 (360)
Q Consensus 306 ~l~tgs~dg~i~iwd~~~----~~~~~~l~~h~~~v~~~~~~~-~g~~las~~-~~~i 357 (360)
++++|+.||.|++||+++ +.++..+ +|...|++++|+| +|.+++++. ++.|
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 999999999999999997 6777777 6999999999999 999888776 4444
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=2.6e-23 Score=206.73 Aligned_cols=162 Identities=30% Similarity=0.349 Sum_probs=142.8
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCC--CEEEEEeC
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNK--DLVLSASG 242 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~--~~l~s~s~ 242 (360)
.++..++.+.+|.+.|++++|+|++..|+||+.|++|++||.......... .+|...|.+++|+|++ ..+++|+.
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence 556788899999999999999999999999999999999998755433332 4688899999999986 58999999
Q ss_pred CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
|++|++||+.++ .....+.+|.+.|++++|+|+|++|++|+.||+|++||++
T Consensus 540 d~~v~vwd~~~~----------------------------~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 540 DKTVKVWNLSNC----------------------------KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp TSCEEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred CCeEEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 999999999765 3456788999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
+++.+..+.. ...|.+++|+|++.+++++.+..||
T Consensus 592 ~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~ 626 (694)
T 3dm0_A 592 EGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIK 626 (694)
T ss_dssp TTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEE
T ss_pred CCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEE
Confidence 9999888864 4679999999999999999887664
No 61
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=9.6e-24 Score=192.25 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=156.1
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSV 228 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i 228 (360)
.+..+..+..|.. .++..+..+.+|.+.|.+++|+| ++.+|++|+.||+|++||+.+++.+..+ .+|...|.++
T Consensus 90 ~~~~dg~i~v~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 90 VAGSRGIIRIINP--ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp EEETTCEEEEECT--TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred EecCCCEEEEEEc--hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 3444445555543 45678889999999999999999 8999999999999999999999999998 6899999999
Q ss_pred EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC----------------------------CCCCCC-------CCCCC
Q psy11015 229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN----------------------------DNDSDL-------DESKE 273 (360)
Q Consensus 229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~----------------------------~~~~~~-------~~~~~ 273 (360)
+|+|++.+|++++.|+.|++||++++........ +..... .....
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 247 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSK 247 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEE
Confidence 9999999999999999999999986643211110 000000 00000
Q ss_pred CCCCccc-------------------cccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCCe----EEE
Q psy11015 274 PDESSIT-------------------LRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT----ILQ 328 (360)
Q Consensus 274 ~~~~~~~-------------------~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~~----~~~ 328 (360)
..+.... ....+..+.+|...|++++|+|+ |++|++|+.||.|++||+.+++ ...
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 0111110 11236677889999999999999 9999999999999999999875 455
Q ss_pred EEecC--CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 329 SLTEP--GEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 329 ~l~~h--~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.+..| ...|++++|+|+|+++++++ |+.|+
T Consensus 328 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 360 (366)
T 3k26_A 328 TLTHHKCGAAIRQTSFSRDSSILIAVCDDASIW 360 (366)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEcccccCCceEEEEeCCCCCeEEEEeCCCEEE
Confidence 77777 78999999999999888776 44443
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=1.3e-23 Score=192.49 Aligned_cols=158 Identities=18% Similarity=0.213 Sum_probs=124.5
Q ss_pred eecCCCCEEEEEECCCCCEEEEEeC------CCcEEEEECCCCeE----EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015 176 FSGHRDGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245 (360)
Q Consensus 176 l~~h~~~V~~l~~~~~~~~l~sgs~------Dg~v~iwd~~~~~~----~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~ 245 (360)
..+|.+.|++++|+|||.+|++||. |++|++|+..++.. .....+|...|.+++|+|++. +++++.||+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 3579999999999999999999998 77899999887643 233456889999999999975 567889999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~ 325 (360)
|+|||+.++.... .......+|...|++++|+|+|++|++|+.||.|++||+.+++
T Consensus 117 v~lWd~~~~~~~~------------------------~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 117 VELWEILEKESLL------------------------VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp EEEC--------C------------------------CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEeeccccceeE------------------------EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999998763321 1233456899999999999999999999999999999999999
Q ss_pred EEEEEecCCCceEEEEEcCCCC-EE-Ecccccchh
Q psy11015 326 ILQSLTEPGEAIRAAAGRTGGP-IR-ASPLLLAIR 358 (360)
Q Consensus 326 ~~~~l~~h~~~v~~~~~~~~g~-~l-as~~~~~ir 358 (360)
++..+.+|...|++++|+|++. ++ +++.|+.||
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 9999999999999999999874 44 445566654
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=1.8e-23 Score=210.94 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=146.0
Q ss_pred eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
...+.+.+|.+.|.+++|+|++++|++|+.||.|+|||+.++..+..+.+|.+.|.+++|+|++++|++|+.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQS 329 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~ 329 (360)
+.++ ..+..+.+|.+.|++++|+|++++|++|+.||.|++||+.++ .....
T Consensus 84 ~~~~----------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 84 YNTG----------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred CCCC----------------------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 9876 346677889999999999999999999999999999999987 77788
Q ss_pred EecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015 330 LTEPGEAIRAAAGRT-GGPIRASPL-LLAI 357 (360)
Q Consensus 330 l~~h~~~v~~~~~~~-~g~~las~~-~~~i 357 (360)
+.+|...|.+++|+| ++.+++++. ++.|
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 899999999999999 887777766 4444
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=2.4e-22 Score=180.84 Aligned_cols=172 Identities=12% Similarity=0.155 Sum_probs=149.1
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
.+.....+..|............+.+|...|.+++|+|+++.+++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC
Confidence 34445566667666655567888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312 (360)
Q Consensus 233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~ 312 (360)
+++++++++.|+.|++||+.++.. +..+ .|...+.+++|+|+++++++++.
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~----------------------------~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQ----------------------------LQQH-DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEE----------------------------EEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEecCCcEEEEECCCCce----------------------------Eeee-cCCCceEEEEECCCCCEEEEEcC
Confidence 999999999999999999987632 2222 46788999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 313 DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 313 dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
||.|++||+.+++. ..+..|...|++++|+|+|.+++++..
T Consensus 245 ~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 245 SSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp TSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecC
Confidence 99999999998875 467789999999999999998887763
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.2e-22 Score=188.67 Aligned_cols=175 Identities=19% Similarity=0.199 Sum_probs=149.2
Q ss_pred eecCCeEEEeeecCccceeeeeeeec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~ 231 (360)
.+..+..+..|... ++.....+.. |.+.|.+++|+|++.+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|
T Consensus 108 ~~~~d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~- 184 (401)
T 4aez_A 108 AVALERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW- 184 (401)
T ss_dssp EEEETTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-
T ss_pred EEECCCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-
Confidence 34444455555544 4555555555 8999999999999999999999999999999999999999999999999999
Q ss_pred eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015 232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 311 (360)
Q Consensus 232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs 311 (360)
++.++++|+.|+.|++||++... .....+.+|.+.|.+++|+|++.+|++|+
T Consensus 185 -~~~~l~~~~~dg~i~i~d~~~~~---------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 185 -NRHVLSSGSRSGAIHHHDVRIAN---------------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp -ETTEEEEEETTSEEEEEETTSSS---------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred -CCCEEEEEcCCCCEEEEecccCc---------------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 46799999999999999997431 34667889999999999999999999999
Q ss_pred CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc---ccchh
Q psy11015 312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL---LLAIR 358 (360)
Q Consensus 312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~---~~~ir 358 (360)
.||.|++||++++..+..+..|...|.+++|+|++ .+++++. ++.|+
T Consensus 237 ~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 237 NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 99999999999999999999999999999999966 5777654 55543
No 66
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.4e-23 Score=206.85 Aligned_cols=181 Identities=23% Similarity=0.294 Sum_probs=158.4
Q ss_pred eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeE
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN 226 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~ 226 (360)
.+.+..++.+.+|.....++..+..+.+|.+.|++++|+|+ +++|++|+.||+|++||+.+++ .+..+.+|.+.|.
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~ 103 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN 103 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE
Confidence 34556667778888777788999999999999999999988 8999999999999999999986 7888899999999
Q ss_pred EEEEeeC--CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--
Q psy11015 227 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-- 302 (360)
Q Consensus 227 ~i~~~p~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-- 302 (360)
+++|+|+ +.++++|+.||+|++||+..+.. .....+.+|...|.+++|+|
T Consensus 104 ~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--------------------------~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------------------TSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEECCSSSC--------------------------CCCEEEECCSSCEEEEEECCCC
T ss_pred EEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--------------------------cceeEeecCCCceEEEEecCcc
Confidence 9999999 99999999999999999986521 13455678999999999999
Q ss_pred -----------CCCEEEEEECCCcEEEEECCCC----eEEEEEecCCCceEEEEEcCC---CCEEEccc-ccch
Q psy11015 303 -----------DGEQVITASWDRVANLFDVETG----TILQSLTEPGEAIRAAAGRTG---GPIRASPL-LLAI 357 (360)
Q Consensus 303 -----------~g~~l~tgs~dg~i~iwd~~~~----~~~~~l~~h~~~v~~~~~~~~---g~~las~~-~~~i 357 (360)
++.++++|+.||.|++||++++ .....+.+|..+|++++|+|+ |.++++++ |+.|
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 5899999999999999999877 667788899999999999999 88888776 4444
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=1.2e-22 Score=191.85 Aligned_cols=203 Identities=21% Similarity=0.360 Sum_probs=157.3
Q ss_pred eeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE
Q psy11015 151 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230 (360)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~ 230 (360)
.+.+..+..+..|.. .++..+..+.+|.+.|++++|+|++ .|++|+.||+|++||+.+++++..+.+|.+.|.+++|
T Consensus 135 l~sgs~dg~i~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 211 (464)
T 3v7d_B 135 VITGADDKMIRVYDS--INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 211 (464)
T ss_dssp EEEEETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEEC--CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE
Confidence 334455555555554 5667889999999999999999988 9999999999999999999999999999999999999
Q ss_pred ee--CCCEEEEEeCCCcEEEEEcccCeeEeeeC-----------------------CCCCCCCC-------CCCCCCCC-
Q psy11015 231 LP--NKDLVLSASGDKSVHIWQAVINWECLVSN-----------------------NDNDSDLD-------ESKEPDES- 277 (360)
Q Consensus 231 ~p--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~-----------------------~~~~~~~~-------~~~~~~~~- 277 (360)
++ ++.++++|+.|++|++||+.++....... .+...... ......+.
T Consensus 212 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~ 291 (464)
T 3v7d_B 212 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNT 291 (464)
T ss_dssp EESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSC
T ss_pred ecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCe
Confidence 95 67899999999999999998765332110 00000000 00000111
Q ss_pred ----ccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc-c
Q psy11015 278 ----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS-P 352 (360)
Q Consensus 278 ----~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las-~ 352 (360)
......++..+.+|...|.+++|+|+++++++|+.||.|++||+.+++++..+.+|...|.+++|+ +.++++ +
T Consensus 292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s 369 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA 369 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe
Confidence 122345677888999999999999999999999999999999999999999999999999999998 355555 4
Q ss_pred cccchh
Q psy11015 353 LLLAIR 358 (360)
Q Consensus 353 ~~~~ir 358 (360)
.|+.||
T Consensus 370 ~dg~v~ 375 (464)
T 3v7d_B 370 ADGSIR 375 (464)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 466554
No 68
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=6e-23 Score=192.63 Aligned_cols=180 Identities=22% Similarity=0.258 Sum_probs=148.3
Q ss_pred ecCCeEEEeeecCc--------cceeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-------EEEE
Q psy11015 154 VQTSKIVSSFKTSL--------LSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGK-------CVLQ 217 (360)
Q Consensus 154 ~~~~~~~~~~~~~~--------~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~-------~~~~ 217 (360)
+.....+.+|.... ..+..+..+.+|.+.|++++|+|++. +|++|+.||+|++|++..+. ....
T Consensus 147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEE
T ss_pred ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecccee
Confidence 33344455565543 23678889999999999999999988 99999999999999998742 2567
Q ss_pred EeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015 218 YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI 296 (360)
Q Consensus 218 ~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 296 (360)
+.+|.+.|.+++|+| ++.+|++++.|+.|++||++++. ...++..+..|...|+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-------------------------TSKPSHTVDAHTAEVN 281 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-------------------------SSSCSEEEECCSSCEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-------------------------CCcceeEeecCCCCeE
Confidence 788999999999999 67899999999999999998652 1134666778999999
Q ss_pred EEEEcCCCC-EEEEEECCCcEEEEECCC-CeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015 297 AADWLSDGE-QVITASWDRVANLFDVET-GTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR 358 (360)
Q Consensus 297 ~i~~sp~g~-~l~tgs~dg~i~iwd~~~-~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir 358 (360)
+++|+|++. .+++|+.||.|++||+++ +..+..+..|...|++++|+|++. +++++. ++.|+
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 999999987 689999999999999997 567889999999999999999985 565554 55543
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=5.2e-23 Score=190.06 Aligned_cols=153 Identities=19% Similarity=0.243 Sum_probs=137.8
Q ss_pred ecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---C---CcCeEEEEEeeCCCEEEEEeCC---CcEE
Q psy11015 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---H---SGSVNSVRFLPNKDLVLSASGD---KSVH 247 (360)
Q Consensus 177 ~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~---h---~~~v~~i~~~p~~~~l~s~s~d---~~i~ 247 (360)
..|...|.+++|+|++ .|++|+.||.|++||+++++++..+.+ | ...|.+++|+|++.+|++++.| +.|+
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 4489999999999999 999999999999999999999999999 9 9999999999999999999999 9999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-------------CCCcEEEEEEcCCCCEEEEEECCC
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-------------HSNVVIAADWLSDGEQVITASWDR 314 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~i~~sp~g~~l~tgs~dg 314 (360)
+||+.++. ++..+.+ |...|.+++|+|++++|++|+.||
T Consensus 262 i~d~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 262 LYETEFGE----------------------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp EEETTTCC----------------------------EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEECCCCc----------------------------ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 99998763 3444555 899999999999999999999999
Q ss_pred cEEEEECCCCeEEEEEe------cC---------------CCceEEEEEcCCC----------CEEEccc-ccchh
Q psy11015 315 VANLFDVETGTILQSLT------EP---------------GEAIRAAAGRTGG----------PIRASPL-LLAIR 358 (360)
Q Consensus 315 ~i~iwd~~~~~~~~~l~------~h---------------~~~v~~~~~~~~g----------~~las~~-~~~ir 358 (360)
.|++||+.+++.+..+. +| ..+|++++|+|+| .+++++. |+.|+
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 99999999999999999 88 9999999999998 6777665 55553
No 70
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.7e-22 Score=188.82 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=145.9
Q ss_pred CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE
Q psy11015 157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~ 236 (360)
+..+.+|.........+..+.+|.+.|++|+|+|+|.+|++|+.||+|++||+.+++++..+.+|...+.+++| ++.+
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~ 201 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI 201 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCE
Confidence 44555666554444444455678899999999999999999999999999999999999999999999999887 4679
Q ss_pred EEEEeCCCcEEEEEcccCeeEeee-CCCCC------------------------------CCCC---C--C---------
Q psy11015 237 VLSASGDKSVHIWQAVINWECLVS-NNDND------------------------------SDLD---E--S--------- 271 (360)
Q Consensus 237 l~s~s~d~~i~vwd~~~~~~~~~~-~~~~~------------------------------~~~~---~--~--------- 271 (360)
+++|+.|+.+++||.......... ..+.. .... . .
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~ 281 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKA 281 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEE
T ss_pred EEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceee
Confidence 999999999999998764322211 10000 0000 0 0
Q ss_pred --CCC------------CCCc-----cccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEE
Q psy11015 272 --KEP------------DESS-----ITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSL 330 (360)
Q Consensus 272 --~~~------------~~~~-----~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l 330 (360)
..+ .+.. .....+...+. +...+.++.|+|+++.+++++ .||.|+|||+.+++++.++
T Consensus 282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence 000 0000 01112233333 335688899999999988765 6899999999999999999
Q ss_pred ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 331 TEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 331 ~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.+|.+.|++++|+|+|.+|+|++ |+.||
T Consensus 361 ~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 361 KGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999999888776 66665
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.8e-24 Score=199.44 Aligned_cols=190 Identities=16% Similarity=0.189 Sum_probs=144.2
Q ss_pred cceeeeeee-ecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCC---Ce---EEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015 168 LSCYKIRSF-SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT---GK---CVLQYSGHSGSVNSVRFLPNKDLVLS 239 (360)
Q Consensus 168 ~~~~~~~~l-~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~---~~---~~~~~~~h~~~v~~i~~~p~~~~l~s 239 (360)
..+.++.++ .+|.+.|++++|+| ++.+|++|+.||+|++||+.+ +. +...+. |.+.|.+++|+|++.+|++
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCEEEEEEeCCCCEEEE
Confidence 456788888 89999999999999 999999999999999999876 32 344444 9999999999999999999
Q ss_pred EeCCCcEEEEEcc---cCeeEee--------eCCCC----C----------C-CCCCCCCCCCC-----ccccccceeEe
Q psy11015 240 ASGDKSVHIWQAV---INWECLV--------SNNDN----D----------S-DLDESKEPDES-----SITLRTPVKEL 288 (360)
Q Consensus 240 ~s~d~~i~vwd~~---~~~~~~~--------~~~~~----~----------~-~~~~~~~~~~~-----~~~~~~~~~~~ 288 (360)
|+.|++|++||+. .+..... ..... . . .........+. ......++..+
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 9999999999995 3322111 00000 0 0 00000001111 22334567777
Q ss_pred eC--CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe-cCCCceEEEEEc----CCCCEEEccc-ccchh
Q psy11015 289 LG--HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGR----TGGPIRASPL-LLAIR 358 (360)
Q Consensus 289 ~~--h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-~h~~~v~~~~~~----~~g~~las~~-~~~ir 358 (360)
.+ |...|++++|+|++++|++|+.||.|++||+++++++..+. .|..+|++++|+ |++.+++++. |+.||
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 77 88999999999999999999999999999999999999986 788899999665 5677888776 44443
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=4.6e-23 Score=191.43 Aligned_cols=177 Identities=21% Similarity=0.206 Sum_probs=146.8
Q ss_pred ecCCeEEEeeecCccce-----eeeeeeecCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEE--eCCCcCe
Q psy11015 154 VQTSKIVSSFKTSLLSC-----YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSV 225 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~-----~~~~~l~~h~~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~--~~h~~~v 225 (360)
+..+..+.+|....... ..+..+.+|.+.|++++|+|++ .+|++|+.||+|++||+.+++++..+ .+|.+.|
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence 44455556666554322 5688899999999999999998 69999999999999999999999999 8899999
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCc-EEEEEEcCC
Q psy11015 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNV-VIAADWLSD 303 (360)
Q Consensus 226 ~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~i~~sp~ 303 (360)
.+++|+|++.+|++++.|+.|++||++++. .+..+ .+|.+. +.+++|+|+
T Consensus 180 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 180 YSVDWSRDGALICTSCRDKRVRVIEPRKGT----------------------------VVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTE----------------------------EEEEEECSSCSSSCCEEEECST
T ss_pred EEEEECCCCCEEEEEecCCcEEEEeCCCCc----------------------------eeeeeccCCCCCcceEEEEcCC
Confidence 999999999999999999999999998763 34455 577765 899999999
Q ss_pred CCEEEEE---ECCCcEEEEECCCCeE-EEEEe-cCCCceEEEEEcCCCCEEE-cc-cccchh
Q psy11015 304 GEQVITA---SWDRVANLFDVETGTI-LQSLT-EPGEAIRAAAGRTGGPIRA-SP-LLLAIR 358 (360)
Q Consensus 304 g~~l~tg---s~dg~i~iwd~~~~~~-~~~l~-~h~~~v~~~~~~~~g~~la-s~-~~~~ir 358 (360)
+.++++| +.||.|++||++++.. +.... .|...+.+++|+|+|.+++ ++ .|+.||
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 9999999 7899999999998654 33333 4677899999999999885 44 366554
No 73
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-23 Score=201.73 Aligned_cols=177 Identities=14% Similarity=0.076 Sum_probs=139.8
Q ss_pred ecCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCC------CCEEEEEeCCCcEEEEECCCCeE-----------
Q psy11015 154 VQTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPG------QPVLGSASADRTVRLWSTQTGKC----------- 214 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~------~~~l~sgs~Dg~v~iwd~~~~~~----------- 214 (360)
+.....+.+|....... ....++.+|.+.|++++|+|+ +.+|++|+.||+|++||+..+.+
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 34445566676544332 224567889999999999996 56999999999999999986632
Q ss_pred EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCc
Q psy11015 215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV 294 (360)
Q Consensus 215 ~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 294 (360)
...+.+|.+.|++++|+|++ .|++|+.||+|++||+.++. .+...+.+|...
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~---------------------------~~~~~~~~H~~~ 310 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE---------------------------VPSFYDQVHDSY 310 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS---------------------------SCSEEEECSSSC
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC---------------------------CceEEeeccccc
Confidence 34788999999999999864 89999999999999997541 235567899999
Q ss_pred EEEE--EEcCCC-CEEEEEECCCcEEEEECCCCeEEEEEecCCC--ceEEEEEcCCCCEEEccc-ccchh
Q psy11015 295 VIAA--DWLSDG-EQVITASWDRVANLFDVETGTILQSLTEPGE--AIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 295 v~~i--~~sp~g-~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~--~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|.++ +|+|+| .+|+|||.||+|+|||+++++++..+.+|.. .|.+++|+|++..++++. +..||
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~ 380 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLR 380 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEE
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEE
Confidence 9999 578888 8999999999999999999888777776653 588999999998777654 54454
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=5.9e-23 Score=216.44 Aligned_cols=159 Identities=19% Similarity=0.254 Sum_probs=146.5
Q ss_pred eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
.....+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+|+++++++|+.|++|++||
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC--CCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETGTILQ 328 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp--~g~~l~tgs~dg~i~iwd~~~~~~~~ 328 (360)
+.++ ..+..+.+|...|.+++|+| ++.++++|+.||.|++||+.++.++.
T Consensus 686 ~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 686 SATG----------------------------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp TTTC----------------------------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE
T ss_pred CCCC----------------------------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh
Confidence 9876 35677889999999999999 55689999999999999999999999
Q ss_pred EEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 329 SLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 329 ~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
.+.+|.+.|++++|+|+|.++++++ |+.|
T Consensus 738 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred eecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 9999999999999999999888876 4444
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=3.6e-23 Score=188.39 Aligned_cols=135 Identities=23% Similarity=0.356 Sum_probs=117.7
Q ss_pred ecCccceeeeeeeecCCCCEEEEEECCC---CCEEEEEeCCCcEEEEECCC-CeEE-EEEeCCCcCeEEEEEeeCCCEEE
Q psy11015 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVL 238 (360)
Q Consensus 164 ~~~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~sgs~Dg~v~iwd~~~-~~~~-~~~~~h~~~v~~i~~~p~~~~l~ 238 (360)
.+.......+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+.+ +..+ ..+.+|.+.|.+++|+|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 3344566778889999999999999999 58999999999999999997 5544 78889999999999999999999
Q ss_pred EEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE--cCCCCEEEEEECCCcE
Q psy11015 239 SASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSDGEQVITASWDRVA 316 (360)
Q Consensus 239 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--sp~g~~l~tgs~dg~i 316 (360)
+|+.|+.|++||+.++. ...+.+|...|.+++| +|++.+|++|+.||.|
T Consensus 103 s~~~dg~v~iwd~~~~~-----------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQ-----------------------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL 153 (368)
T ss_dssp EEETTSEEEEEETTTTE-----------------------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EEcCCCcEEEEEcCCCC-----------------------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcE
Confidence 99999999999998762 2335579999999999 8999999999999999
Q ss_pred EEEECCCCeEE
Q psy11015 317 NLFDVETGTIL 327 (360)
Q Consensus 317 ~iwd~~~~~~~ 327 (360)
++||+++++.+
T Consensus 154 ~vwd~~~~~~~ 164 (368)
T 3mmy_A 154 KFWDTRSSNPM 164 (368)
T ss_dssp EEECSSCSSCS
T ss_pred EEEECCCCcEE
Confidence 99999876543
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=7.3e-24 Score=199.14 Aligned_cols=163 Identities=14% Similarity=0.111 Sum_probs=132.3
Q ss_pred ceeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEee-CCCEEEEEeCCC
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDK 244 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~ 244 (360)
.........+|...|+||+|+|. +.+||+|+.||+|+|||+.++. ....+.+|.+.|++|+|+| ++.+|++|+.|+
T Consensus 108 ~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 108 SYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp TTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 33455667889999999999994 5699999999999999998775 4455678999999999998 688999999999
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
+|++||+.++... .......+...+.+++|+|++.+|++|+.||.|++||++ +
T Consensus 188 ~v~iwd~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~ 240 (435)
T 4e54_B 188 TTRLQDFKGNILR--------------------------VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-G 240 (435)
T ss_dssp CEEEEETTSCEEE--------------------------EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-S
T ss_pred EEEEeeccCCcee--------------------------EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-c
Confidence 9999999765211 111122344567899999999999999999999999986 5
Q ss_pred eEEEEEecCCCceEEEEEcCCCC-EEEccc-ccchh
Q psy11015 325 TILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAIR 358 (360)
Q Consensus 325 ~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~ir 358 (360)
+.+..+.+|...|++++|+|++. ++++++ |+.||
T Consensus 241 ~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 241 KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 56778889999999999999886 676654 66554
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=4.8e-23 Score=193.33 Aligned_cols=185 Identities=16% Similarity=0.236 Sum_probs=146.3
Q ss_pred eecCCeEEEeeecCcc---------ceeeeeeeecCC------------CCEEEEEECCCC--CEEEEEeCCCcEEEEEC
Q psy11015 153 KVQTSKIVSSFKTSLL---------SCYKIRSFSGHR------------DGVWDVAVRPGQ--PVLGSASADRTVRLWST 209 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~---------~~~~~~~l~~h~------------~~V~~l~~~~~~--~~l~sgs~Dg~v~iwd~ 209 (360)
.+.....+.+|..... ...+...+.+|. +.|++++|+|++ ..|++|+.||+|++||+
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence 4555566666765532 234688899998 889999999998 79999999999999998
Q ss_pred CCCeEE---------------------------------------EE-EeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 210 QTGKCV---------------------------------------LQ-YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 210 ~~~~~~---------------------------------------~~-~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
.++... .. ..+|...|.+++|+|++++|++| .|++|++|
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw 203 (447)
T 3dw8_B 125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW 203 (447)
T ss_dssp EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence 764432 13 36899999999999999999998 79999999
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEECCCCeE--
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI-- 326 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~~~~~~-- 326 (360)
|+.++....... ......+.+|...|.+++|+|++ .+|++|+.||.|++||++++..
T Consensus 204 d~~~~~~~~~~~--------------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 204 HLEITDRSFNIV--------------------DIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ETTEEEEEEEEE--------------------ECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred ECCCCCceeeee--------------------ecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 998543222100 00011356899999999999998 9999999999999999999887
Q ss_pred --EEEEecCCC------------ceEEEEEcCCCCEEEcccccchh
Q psy11015 327 --LQSLTEPGE------------AIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 327 --~~~l~~h~~------------~v~~~~~~~~g~~las~~~~~ir 358 (360)
+..+..|.. .|++++|+|+|.+++++.++.||
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~ 309 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVK 309 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEE
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEE
Confidence 788888876 89999999999999998875443
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=3.8e-22 Score=179.58 Aligned_cols=159 Identities=15% Similarity=0.206 Sum_probs=142.7
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 247 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~ 247 (360)
.++..+..+.+|.+.|.+++|+|+++.|++++.||.|++||+.+++.+..+. |...+.+++|+|+++++++++.|+.|+
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVE 249 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEE
Confidence 4567888999999999999999999999999999999999999999888876 788999999999999999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||+.++ ....+..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 250 ~~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 250 VLHVNKP-----------------------------DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEETTSS-----------------------------CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCCC-----------------------------CeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 9999865 23456789999999999999999999999999999999999887
Q ss_pred EEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 328 QSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
... .|...|++++|+|++++++++. ++.|
T Consensus 301 ~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 301 FQS-KESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EEE-ECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EEe-cCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 554 4788999999999999888766 4444
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.5e-23 Score=189.99 Aligned_cols=161 Identities=22% Similarity=0.257 Sum_probs=146.0
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 247 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~ 247 (360)
..+..+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++ ++++++.|+.|+
T Consensus 235 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~ 313 (425)
T 1r5m_A 235 TEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVR 313 (425)
T ss_dssp TCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred CCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEE
Confidence 3456777888999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe--
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT-- 325 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~-- 325 (360)
+||+.++ ..+..+..|...|.+++|+|++++|++|+.||.|++||+.++.
T Consensus 314 i~d~~~~----------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 314 LWSLKQN----------------------------TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSK 365 (425)
T ss_dssp EEETTTT----------------------------EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-
T ss_pred EEECCCC----------------------------cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccc
Confidence 9999876 3456677899999999999999999999999999999999888
Q ss_pred ------------------EEEEEecCCC--ceEEEEEcCCCCEEEccc-ccch
Q psy11015 326 ------------------ILQSLTEPGE--AIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 326 ------------------~~~~l~~h~~--~v~~~~~~~~g~~las~~-~~~i 357 (360)
.+..+..|.. .|++++|+|+|.+++++. ++.|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCC
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceE
Confidence 8899999976 999999999999887665 4444
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=3.8e-23 Score=192.53 Aligned_cols=170 Identities=16% Similarity=0.233 Sum_probs=140.0
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+.....+..|.. .++.....+.+| ..+....|+|++.+|++|+.||.|++||+.++.+...+.+|.+.|.+++|+|+
T Consensus 74 ~~~d~~v~i~d~--~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 150 (420)
T 3vl1_A 74 ARLDGHDFLFNT--IIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS 150 (420)
T ss_dssp EEETTEEEEEEC--CSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT
T ss_pred EEcCCcEEEEEe--cccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCC
Confidence 333444444443 344555566666 44455578999999999999999999999999999988999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 313 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d 313 (360)
+++|++|+.|++|++||+.++ ..+..+.+|...|.+++|+|++++|++|+.|
T Consensus 151 ~~~l~s~s~d~~i~iwd~~~~----------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 151 GEALISSSQDMQLKIWSVKDG----------------------------SNPRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp SSEEEEEETTSEEEEEETTTC----------------------------CCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEeCCCeEEEEeCCCC----------------------------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 999999999999999999866 3466788999999999999999999999999
Q ss_pred CcEEEEECCCCeEEEEEec---CCCceEE---------------------EEEcCCCCEEEcccc
Q psy11015 314 RVANLFDVETGTILQSLTE---PGEAIRA---------------------AAGRTGGPIRASPLL 354 (360)
Q Consensus 314 g~i~iwd~~~~~~~~~l~~---h~~~v~~---------------------~~~~~~g~~las~~~ 354 (360)
|.|++||+++++.+..+.. |...|.+ ++|+|+|.+++++..
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 9999999999999999875 3344444 455789988887764
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.3e-22 Score=183.74 Aligned_cols=194 Identities=14% Similarity=0.174 Sum_probs=137.9
Q ss_pred CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-----------
Q psy11015 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS----------- 224 (360)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~----------- 224 (360)
....+..|. ..+..+..+.+|.+.|.+++|+|++.+|++++.||.|++||+.+++.+..+..+...
T Consensus 128 ~dg~i~i~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 128 ENGELRLWN---KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp TTSCEEEEE---TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred CCCeEEEEe---CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 334444554 566788899999999999999999999999999999999999988877766555444
Q ss_pred ----eEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCC---------CCCCC-----cccccccee
Q psy11015 225 ----VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESK---------EPDES-----SITLRTPVK 286 (360)
Q Consensus 225 ----v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~ 286 (360)
+.+++|+|++ .+++++.|+.|++||+.++........+......... ...+. ......+..
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence 5555555543 3455555555555555544333332222111000000 00000 111224567
Q ss_pred EeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 287 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 287 ~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.+.+|...|.+++|+|++ ++++++.||.|++||+.+++.+..+..|...|++++|+|+|.+++++..
T Consensus 284 ~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 778899999999999999 9999999999999999999999999999999999999999999988774
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=2.2e-22 Score=188.78 Aligned_cols=179 Identities=20% Similarity=0.310 Sum_probs=148.1
Q ss_pred eeecCCeEEEeeecCcc-----ceeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCC
Q psy11015 152 LKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG---KCVLQYSGHS 222 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~---~~~~~~~~h~ 222 (360)
+.+...+.+..|..... .......+.+|.+.|.+++|+| ++.+|++|+.||.|++||++++ .++..+.+|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 33444555666665541 1233567889999999999999 6779999999999999999987 5788888999
Q ss_pred cCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 223 GSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 223 ~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
+.|++++|+|++. ++++|+.||+|++||++.. ..++..+.+|...|.+++|+
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~---------------------------~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNL---------------------------KLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCT---------------------------TSCSEEEECCSSCEEEEEEC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC---------------------------CCCeEEeecCCCCEEEEEEC
Confidence 9999999999987 6889999999999999863 13577888999999999999
Q ss_pred CCCC-EEEEEECCCcEEEEECCC--------------CeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015 302 SDGE-QVITASWDRVANLFDVET--------------GTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAI 357 (360)
Q Consensus 302 p~g~-~l~tgs~dg~i~iwd~~~--------------~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~i 357 (360)
|+++ +|++|+.||.|++||+.. ...+..+.+|...|++++|+|+++ ++++++ ++.|
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 9985 689999999999999986 367778888999999999999998 666655 4444
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.4e-23 Score=189.72 Aligned_cols=178 Identities=19% Similarity=0.243 Sum_probs=148.9
Q ss_pred ecCCeEEEeeecCccc-------eeeeeeeecCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCC----
Q psy11015 154 VQTSKIVSSFKTSLLS-------CYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGH---- 221 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~-------~~~~~~l~~h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h---- 221 (360)
+..+..+..|...... ......+.+|.+.|.+++|+|+ +.+|++|+.||.|++||+++++++..+..|
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 211 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS 211 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS
T ss_pred EcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc
Confidence 3344455555554332 1223445789999999999999 789999999999999999999999999876
Q ss_pred --CcCeEEEEEeeCC-CEEEEEeCCC---cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCc
Q psy11015 222 --SGSVNSVRFLPNK-DLVLSASGDK---SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNV 294 (360)
Q Consensus 222 --~~~v~~i~~~p~~-~~l~s~s~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~ 294 (360)
...|.+++|+|++ .++++++.|+ .|++||++++. .+...+. +|...
T Consensus 212 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~---------------------------~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 212 GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN---------------------------TPLQTLNQGHQKG 264 (416)
T ss_dssp CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT---------------------------SCSBCCCSCCSSC
T ss_pred ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC---------------------------CCcEEeecCccCc
Confidence 7889999999997 6899999998 99999998651 2455566 89999
Q ss_pred EEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCC-CEEEccc-ccchh
Q psy11015 295 VIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG-PIRASPL-LLAIR 358 (360)
Q Consensus 295 v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g-~~las~~-~~~ir 358 (360)
|.+++|+| ++++|++|+.||.|++||+.+++.+..+..|...|++++|+|++ .+++++. |+.||
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 99999999 99999999999999999999999999999999999999999998 7777766 44443
No 84
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.9e-23 Score=194.06 Aligned_cols=153 Identities=10% Similarity=0.034 Sum_probs=126.1
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc-----CeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-----SVNSVRFLPNKDLVLSASGDKSVHIWQAV 252 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~-----~v~~i~~~p~~~~l~s~s~d~~i~vwd~~ 252 (360)
+|.+.|++++|+|+|..||+++.||+|++||... ++..+. |.. .|.+++|+|+|++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688999999999999999999999999999654 677777 665 49999999999999999999999999998
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe----eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-- 326 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~-- 326 (360)
++.... ...-.+.++ .+|...|.+++|+|+| +++++.|+++++||+.++..
T Consensus 160 ~~~l~~---------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 160 KNSENT---------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp CCTTTC---------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred CCcccc---------------------ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence 662100 000024554 5788899999999999 88999999999999988773
Q ss_pred -EEEEe-cCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 327 -LQSLT-EPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 327 -~~~l~-~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
.+++. +|...|.+++|+ |..+|++.++.||
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIk 248 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DYKVVLTCPGYVH 248 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TTEEEEECSSEEE
T ss_pred ceeeecccccCcEEEEEEE--CCEEEEEeCCeEE
Confidence 35674 788899999999 6888888877664
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4.3e-22 Score=187.83 Aligned_cols=172 Identities=14% Similarity=0.087 Sum_probs=145.5
Q ss_pred eecCCeEEEeeecCccceeeeeeee--cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE----EEeCCCcCeE
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL----QYSGHSGSVN 226 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~----~~~~h~~~v~ 226 (360)
.+.....+.+|......+..+..+. +|...|++++|+|++.+|++|+.||.|++|++.++.... .+.+|.+.|.
T Consensus 120 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~ 199 (450)
T 2vdu_B 120 CADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT 199 (450)
T ss_dssp EEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred EECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE
Confidence 3445566666776533556666665 678999999999999999999999999999998876543 7788999999
Q ss_pred EEEEeeC---CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcC
Q psy11015 227 SVRFLPN---KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLS 302 (360)
Q Consensus 227 ~i~~~p~---~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp 302 (360)
+++|+|+ +.+|++|+.|++|++||+.++ ..+.. +.+|...|.+++|+
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----------------------------~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRDEHIKISHYPQC----------------------------FIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EEEEEECTTSCEEEEEEETTSCEEEEEESCT----------------------------TCEEEECCCCSSCEEEEEEC-
T ss_pred EEEEcCCCCCCcEEEEEcCCCcEEEEECCCC----------------------------ceeeeeecCCCCceEEEEEC-
Confidence 9999999 999999999999999998766 23444 55899999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEEecC-------------------------CCceEEEEEcCCCCEEEccc
Q psy11015 303 DGEQVITASWDRVANLFDVETGTILQSLTEP-------------------------GEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-------------------------~~~v~~~~~~~~g~~las~~ 353 (360)
+|++|++|+.||.|++||+.+++++..+..+ ...|.+++|+|++.+++++.
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999999999999998888632 35799999999999888775
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=4.1e-22 Score=181.41 Aligned_cols=155 Identities=14% Similarity=0.173 Sum_probs=134.8
Q ss_pred eeecCCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEeeC----CCEEEEEe
Q psy11015 175 SFSGHRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLPN----KDLVLSAS 241 (360)
Q Consensus 175 ~l~~h~~~V~~l~~~~~----~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p~----~~~l~s~s 241 (360)
...+|.+.|++++|+|+ ...+++++.++.|++||+.++..+..+.. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45677777788999999998877766654 5577999999999 67999999
Q ss_pred CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEE
Q psy11015 242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFD 320 (360)
Q Consensus 242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd 320 (360)
.|+.|++||+.++ ..+..+.+|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 93 ~dg~i~v~d~~~~----------------------------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 93 SRGIIRIINPITM----------------------------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCEEEEECTTTC----------------------------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEEchhc----------------------------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 9999999998766 34667789999999999999 999999999999999999
Q ss_pred CCCCeEEEEE---ecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 321 VETGTILQSL---TEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 321 ~~~~~~~~~l---~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
+++++.+..+ ..|...|++++|+|++.+++++. ++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 9999999988 68999999999999999888776 4444
No 87
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=5.1e-22 Score=184.42 Aligned_cols=161 Identities=17% Similarity=0.317 Sum_probs=137.6
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEe--CCCc
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS--GDKS 245 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s--~d~~ 245 (360)
....+..+.+|.+.|.+++|+|++.+|++|+.||.|++||+.++.++..+.+|.+.|.+++|+|++. ++++|+ .|+.
T Consensus 206 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 206 ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 3456788899999999999999999999999999999999999999999999999999999999764 566655 6999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCC
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVET 323 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~ 323 (360)
|++||+.++. ++..+. |...|.+++|+|+++++++++ .||.|++||+.+
T Consensus 286 i~i~d~~~~~----------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 286 IHFWNAATGA----------------------------RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEEETTTCC----------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EEEEECCCCC----------------------------EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 9999998762 334443 567899999999999999954 899999999998
Q ss_pred CeEEE--EEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 324 GTILQ--SLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 324 ~~~~~--~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+.... .+.+|...|++++|+|+|.++++++ |+.||
T Consensus 337 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~ 374 (401)
T 4aez_A 337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK 374 (401)
T ss_dssp TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEE
T ss_pred ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 76554 4678999999999999999888776 44443
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-22 Score=190.68 Aligned_cols=198 Identities=13% Similarity=0.142 Sum_probs=151.7
Q ss_pred ecCCeEEEeeecCccceeeeeeeec--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEE
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSG--HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRF 230 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~--h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~ 230 (360)
+.....+..|.. .++.++..+.+ |.+.|++++|+|++.+|++|+.||+|++||+++++++..+. +|...|.+++|
T Consensus 188 ~~~d~~i~iwd~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 188 LTNLSRVIIFDI--RTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EETTSEEEEEET--TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EeCCCeEEEEeC--CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 333344444443 45778888888 89999999999999999999999999999999999999986 78889999976
Q ss_pred ee----CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC--CCCcEEEEEEcCCC
Q psy11015 231 LP----NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDG 304 (360)
Q Consensus 231 ~p----~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~sp~g 304 (360)
+| ++.++++|+.|++|++||+.++.....+..+..........+..... .-..+.+ |...|++++|+ ++
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~v~~l~~~-~~ 340 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL----EELNFCGIRSLNALSTISVS-ND 340 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG----GGCCCCCCCSGGGGCCEEEE-TT
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc----ccceecccccCCceEEEEEC-Cc
Confidence 65 57799999999999999999887766655443222211111111101 0112444 88999999999 78
Q ss_pred CEEEEEECCCcEEEEECCCCeEEEEEec-------------------------------------CCCceEEEEEcCC--
Q psy11015 305 EQVITASWDRVANLFDVETGTILQSLTE-------------------------------------PGEAIRAAAGRTG-- 345 (360)
Q Consensus 305 ~~l~tgs~dg~i~iwd~~~~~~~~~l~~-------------------------------------h~~~v~~~~~~~~-- 345 (360)
++|++|+.||.|++||+.+++.+..+.+ |...|++++|+++
T Consensus 341 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 341 KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 8999999999999999999887777765 8899999999988
Q ss_pred CCEEEccc-ccchh
Q psy11015 346 GPIRASPL-LLAIR 358 (360)
Q Consensus 346 g~~las~~-~~~ir 358 (360)
+.+++|+. ++.||
T Consensus 421 ~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 421 TPLLVACDNSGLIG 434 (437)
T ss_dssp SEEEEEEETTSCEE
T ss_pred ceEEEEEcCCceEE
Confidence 77888776 45454
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.89 E-value=2.7e-22 Score=185.23 Aligned_cols=182 Identities=14% Similarity=0.106 Sum_probs=150.5
Q ss_pred eeeeecCCeEEEeeecCccc----eeeeeeeecCCCCEEEEEECCC----C---CEEEEEeCCCcEEEEECCCCeE----
Q psy11015 150 NKLKVQTSKIVSSFKTSLLS----CYKIRSFSGHRDGVWDVAVRPG----Q---PVLGSASADRTVRLWSTQTGKC---- 214 (360)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~h~~~V~~l~~~~~----~---~~l~sgs~Dg~v~iwd~~~~~~---- 214 (360)
..+.+..+..+.+|...... ...+..+.+|...|++++|+|+ + .+|++|+.||.|++||+.++..
T Consensus 28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 107 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 107 (397)
T ss_dssp EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCE
T ss_pred eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccc
Confidence 44455666777777765543 4478888999999999999999 9 9999999999999999998877
Q ss_pred -EEEEeCC-----CcCeEEEEEe----eCCCE-EEEEeCCCcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCC
Q psy11015 215 -VLQYSGH-----SGSVNSVRFL----PNKDL-VLSASGDKSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDES 277 (360)
Q Consensus 215 -~~~~~~h-----~~~v~~i~~~----p~~~~-l~s~s~d~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
+..+.+| ...|.+++|+ |++.+ |++|+.|+.|++||+.+ +...
T Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------------- 167 (397)
T 1sq9_A 108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL-------------------- 167 (397)
T ss_dssp EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT--------------------
T ss_pred cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee--------------------
Confidence 8889988 5899999999 99999 99999999999999986 3111
Q ss_pred ccccccceeEe-------eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---C---CCceEEEEEcC
Q psy11015 278 SITLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE---P---GEAIRAAAGRT 344 (360)
Q Consensus 278 ~~~~~~~~~~~-------~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~---h---~~~v~~~~~~~ 344 (360)
...+...+ ..|...|.+++|+|++ ++++|+.||.|++||+++++.+..+.. | ...|++++|+|
T Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 168 ---NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp ---CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ---eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 01122244 4588899999999999 999999999999999999999999998 8 99999999999
Q ss_pred CCCEEEccccc
Q psy11015 345 GGPIRASPLLL 355 (360)
Q Consensus 345 ~g~~las~~~~ 355 (360)
++.+++++...
T Consensus 244 ~~~~l~~~~~d 254 (397)
T 1sq9_A 244 QGSLLAIAHDS 254 (397)
T ss_dssp STTEEEEEEEE
T ss_pred CCCEEEEEecC
Confidence 99999887753
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=4.4e-22 Score=200.80 Aligned_cols=172 Identities=20% Similarity=0.259 Sum_probs=151.7
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+..+..+.+|.. .++..+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|+
T Consensus 31 ~~~~g~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 31 TLYSGRVEIWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred EeCCCEEEEEEC--CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC
Confidence 334455555554 457788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEEC
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASW 312 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~ 312 (360)
++++++|+.|++|++||+.++. .....+.+|...|.+++|+| ++..+++|+.
T Consensus 109 ~~~l~~~~~dg~i~vw~~~~~~---------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 109 KPYVLSGSDDLTVKLWNWENNW---------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp SSEEEEEETTSEEEEEEGGGTS---------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred CCEEEEEcCCCEEEEEECCCCc---------------------------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 9999999999999999987652 23566788999999999999 8899999999
Q ss_pred CCcEEEEECCCCeEEEEEecCC-CceEEEEEcC--CCCEEEcccc
Q psy11015 313 DRVANLFDVETGTILQSLTEPG-EAIRAAAGRT--GGPIRASPLL 354 (360)
Q Consensus 313 dg~i~iwd~~~~~~~~~l~~h~-~~v~~~~~~~--~g~~las~~~ 354 (360)
||.|++||+.++.....+..+. ..+.+++|+| +|.+++++..
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 9999999999888877777654 8999999999 8988887764
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=2.6e-21 Score=174.53 Aligned_cols=172 Identities=20% Similarity=0.249 Sum_probs=139.7
Q ss_pred CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCC--CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ--PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~--~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
....+..|... ........+.+|.+.|.+++|++++ .++++++.|++|++||+.+++++..+.+|.+.|++++|+|+
T Consensus 148 ~d~~~~~~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 148 RDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD 226 (340)
T ss_dssp TTSCEEEECTT-SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCCeEEEEEeC-CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence 33344444332 2334456678899999999998865 47899999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 313 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d 313 (360)
+++|++|+.|++|++||+.+.. ++..+.+ ...|.+++|+|++.+ ++++.|
T Consensus 227 ~~~l~s~s~Dg~i~iwd~~~~~----------------------------~~~~~~~-~~~v~~~~~~~~~~~-~~~~~d 276 (340)
T 4aow_A 227 GSLCASGGKDGQAMLWDLNEGK----------------------------HLYTLDG-GDIINALCFSPNRYW-LCAATG 276 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTTE----------------------------EEEEEEC-SSCEEEEEECSSSSE-EEEEET
T ss_pred CCEEEEEeCCCeEEEEEeccCc----------------------------eeeeecC-CceEEeeecCCCCce-eeccCC
Confidence 9999999999999999998763 3444443 467999999998755 456679
Q ss_pred CcEEEEECCCCeEEEEEe---------cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 314 RVANLFDVETGTILQSLT---------EPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 314 g~i~iwd~~~~~~~~~l~---------~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+.|++||++++..+..+. +|...|++++|+|+|++|+|++ |+.||
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999999999988777654 5788999999999999988876 55554
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-21 Score=174.67 Aligned_cols=159 Identities=23% Similarity=0.307 Sum_probs=140.8
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
..++.+++.+|.+.|++++| |++.+|++|+.||.|++||+.++.....+..|.+.|.+++|+|++.++++|+.|+.+++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 34678899999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEE
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~ 328 (360)
|++... ....+...+.+|...|.+++| +++++++|+.||.|++|| .+..+.
T Consensus 86 ~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~ 136 (313)
T 3odt_A 86 VPLFAT-------------------------SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVY 136 (313)
T ss_dssp EETTCC-------------------------TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEE
T ss_pred EEeeec-------------------------CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEE
Confidence 998654 122356778899999999999 678999999999999999 788889
Q ss_pred EEecCCCceEEEEEcC-CCCEEEccc-ccch
Q psy11015 329 SLTEPGEAIRAAAGRT-GGPIRASPL-LLAI 357 (360)
Q Consensus 329 ~l~~h~~~v~~~~~~~-~g~~las~~-~~~i 357 (360)
.+..|...+.+++|+| ++.+++++. ++.|
T Consensus 137 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 137 NLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp EEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 9999999999999988 788777766 4443
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.6e-21 Score=176.15 Aligned_cols=158 Identities=13% Similarity=0.043 Sum_probs=141.8
Q ss_pred eeeeeecCCC--CEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 172 KIRSFSGHRD--GVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 172 ~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
.+..+.+|.+ .+.+++|+|+++.|++|+.||.|++||+.+ +..+..+.+|.+.|.+++|+|++.+|++++.|+.|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 244 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFL 244 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEE
Confidence 4556677777 999999999999999999999999999998 7899999999999999999999999999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC--------------
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-------------- 314 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-------------- 314 (360)
||+.++. .+..+. +...+.+++|+|+++++++++.++
T Consensus 245 ~d~~~~~----------------------------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 245 VDVSTLQ----------------------------VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp EETTTCC----------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred EECCCCc----------------------------eeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 9998763 233343 678899999999999999999988
Q ss_pred cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 315 VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.+++||..+++.+..+.+|...|++++|+|+|.++++++ |+.||
T Consensus 296 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 296 EARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 899999999999999999999999999999999988876 55543
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.8e-22 Score=182.26 Aligned_cols=174 Identities=7% Similarity=-0.045 Sum_probs=140.7
Q ss_pred eeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC---------CCeEEEEEe-
Q psy11015 150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYS- 219 (360)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~---------~~~~~~~~~- 219 (360)
..+.+..+..+..|... ++..+..+. .+.|.++.|+|. +++|+.|++|++|+.. +++.+..+.
T Consensus 50 ~l~sg~~Dg~v~iwd~~--~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLK--DSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEETTEEEEEEES--SSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEECC--CCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 44556666677666654 344455554 467888889988 9999999999999665 555555554
Q ss_pred CCCcCeEEEEEee--CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEE
Q psy11015 220 GHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVI 296 (360)
Q Consensus 220 ~h~~~v~~i~~~p--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~ 296 (360)
+|.+.|.+++|+| +++++++|+.|++|++||+.++.. .... ..|...|.
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~----------------------------~~~~~~~~~~~i~ 174 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ----------------------------YIVHSAKSDVEYS 174 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE----------------------------EEEECCCSSCCCC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE----------------------------EEEEecCCCCceE
Confidence 6778999999999 999999999999999999987732 2223 23556799
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCeEE-EEEec-CCCceEEEEEcCCCCEEEcccccchh
Q psy11015 297 AADWLSDGEQVITASWDRVANLFDVETGTIL-QSLTE-PGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
+++|+|+|.+|++|+.||.|++||+++++.+ ..+.. |..+|++++|+|+|.++++++++.||
T Consensus 175 ~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 175 SGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 9999999999999999999999999999887 78888 99999999999999999999877654
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.89 E-value=3.6e-22 Score=187.29 Aligned_cols=179 Identities=18% Similarity=0.204 Sum_probs=132.1
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEeCCC------------cCeEEEEEeeCC
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHS------------GSVNSVRFLPNK 234 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----------~~~~~~~h~------------~~v~~i~~~p~~ 234 (360)
.|.+.|++++|+|++.+|++|+.||.|+|||+.++. +...+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999999876 588899998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcc-----------ccccceeE-eeCCCCcEEEEEE
Q psy11015 235 --DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSI-----------TLRTPVKE-LLGHSNVVIAADW 300 (360)
Q Consensus 235 --~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~h~~~v~~i~~ 300 (360)
.+|++++.|++|++||+..+......................... ....+... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 799999999999999998765432211111100000000000000 00112223 3589999999999
Q ss_pred cCCCCEEEEEECCCcEEEEECCC-CeEEEE-------EecCCCceEEEEEcCCC-CEEEccc-ccch
Q psy11015 301 LSDGEQVITASWDRVANLFDVET-GTILQS-------LTEPGEAIRAAAGRTGG-PIRASPL-LLAI 357 (360)
Q Consensus 301 sp~g~~l~tgs~dg~i~iwd~~~-~~~~~~-------l~~h~~~v~~~~~~~~g-~~las~~-~~~i 357 (360)
+|+|++|++| .||.|++||+.+ +..+.. +.+|...|++++|+|+| .+++++. |+.|
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 9999999999 799999999984 445443 45789999999999998 8888776 4444
No 96
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=4.8e-22 Score=181.77 Aligned_cols=187 Identities=16% Similarity=0.147 Sum_probs=133.7
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEE
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVH 247 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~ 247 (360)
+...+.++.+|.+.|++++|+|++.+|++|+.|+ +++||+.++........ ..+..+++.++++.+ ++|+.|++|+
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEE
Confidence 3455667789999999999999999999998775 78999998877665542 257788888888877 5678889999
Q ss_pred EEEcccCeeEeeeCCCCC------------------------CCC--CC-----------------CC--CCCCCccccc
Q psy11015 248 IWQAVINWECLVSNNDND------------------------SDL--DE-----------------SK--EPDESSITLR 282 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~------------------------~~~--~~-----------------~~--~~~~~~~~~~ 282 (360)
+||+.++.....+..... ... .. .. .........+
T Consensus 85 iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEE
T ss_pred EEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEE
Confidence 999988865544322110 000 00 00 1111111110
Q ss_pred --------------------cc-eeEeeCCCCcEEEEEEcCCCCEEEEEECCCc-EEEEECCCCeEEEEEe-c-CCCceE
Q psy11015 283 --------------------TP-VKELLGHSNVVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLT-E-PGEAIR 338 (360)
Q Consensus 283 --------------------~~-~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~-i~iwd~~~~~~~~~l~-~-h~~~v~ 338 (360)
.+ +..+.+|...|++++|+|+|++|++|+.||+ |++||+++++++..+. + |...|+
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 12 6778899999999999999999999999998 9999999999999998 5 999999
Q ss_pred EEEEcCCCCEEEcccc-cchh
Q psy11015 339 AAAGRTGGPIRASPLL-LAIR 358 (360)
Q Consensus 339 ~~~~~~~g~~las~~~-~~ir 358 (360)
+++|+|+|.++++++. +.||
T Consensus 245 ~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp EEEECTTSCEEEEEETTCEEE
T ss_pred EEEECCCCCEEEEEECCCEEE
Confidence 9999999999988764 4443
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.1e-22 Score=185.82 Aligned_cols=181 Identities=15% Similarity=0.184 Sum_probs=144.8
Q ss_pred cCCeEEEeeecCcccee-eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCeEEEE
Q psy11015 155 QTSKIVSSFKTSLLSCY-KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVR 229 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~~v~~i~ 229 (360)
.....+..|........ .+..+ .|.+.|++++|+|++.+|++|+.||.|++||+.+ ...+..+.+|.+.|.+++
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 120 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVK 120 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEE
Confidence 34445556665543322 33333 6899999999999999999999999999999987 458889999999999999
Q ss_pred EeeC-CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEE
Q psy11015 230 FLPN-KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQV 307 (360)
Q Consensus 230 ~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l 307 (360)
|+|+ +.+|++++.|++|++||+.++..... .........+.+|...|.+++|+|+ +.++
T Consensus 121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNGEIFIWDMNKCTESPS-------------------NYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp ECSSSTTBEEEECSSSCEEBCBTTTTSSCTT-------------------TCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred EcCCCCCEEEEEcCCCeEEEEECCCCccccc-------------------cccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 9998 89999999999999999987631000 0000012234578999999999999 7899
Q ss_pred EEEECCCcEEEEECCCCeEEEEEecC------CCceEEEEEcCCC-CEEEccccc
Q psy11015 308 ITASWDRVANLFDVETGTILQSLTEP------GEAIRAAAGRTGG-PIRASPLLL 355 (360)
Q Consensus 308 ~tgs~dg~i~iwd~~~~~~~~~l~~h------~~~v~~~~~~~~g-~~las~~~~ 355 (360)
++|+.||.|++||+++++.+..+..| ...|++++|+|++ .+++++...
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 99999999999999999999999876 7899999999997 577776654
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=1.2e-21 Score=177.86 Aligned_cols=180 Identities=13% Similarity=0.120 Sum_probs=141.3
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCC----CEEEEE----ECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCe
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRD----GVWDVA----VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~----~V~~l~----~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v 225 (360)
+..+..+..|...... ..+..+..|.+ .|++++ |+|++.+|++|+.||.|++||+++++.... ..|...|
T Consensus 135 ~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v 212 (357)
T 3i2n_A 135 GSRDGTVKVWDPRQKD-DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGV 212 (357)
T ss_dssp EETTSCEEEECTTSCS-SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCE
T ss_pred EeCCCeEEEEeCCCCC-CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCce
Confidence 3444444455443221 25666666655 899998 788999999999999999999999987555 4589999
Q ss_pred EEEEEee---CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015 226 NSVRFLP---NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS 302 (360)
Q Consensus 226 ~~i~~~p---~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp 302 (360)
.+++|+| ++.++++|+.|+.|++||++++..... -....+.+|...|.+++|+|
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~ 269 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG-----------------------FASVSEKAHKSTVWQVRHLP 269 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE-----------------------EEEEEEECCSSCEEEEEEET
T ss_pred EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc-----------------------eeeeccCCCcCCEEEEEECC
Confidence 9999999 899999999999999999886522110 01224458999999999999
Q ss_pred CCC-EEEEEECCCcEEEEECCCC-------------------eEEEEEecCCCceEEEEEcCCCCEEE-ccc-ccchh
Q psy11015 303 DGE-QVITASWDRVANLFDVETG-------------------TILQSLTEPGEAIRAAAGRTGGPIRA-SPL-LLAIR 358 (360)
Q Consensus 303 ~g~-~l~tgs~dg~i~iwd~~~~-------------------~~~~~l~~h~~~v~~~~~~~~g~~la-s~~-~~~ir 358 (360)
++. ++++|+.||.|++||++++ ..+..+.+|..+|++++|+|+|.+++ |++ |+.||
T Consensus 270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 998 8999999999999998754 46788899999999999999998776 454 66654
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.9e-22 Score=200.86 Aligned_cols=160 Identities=18% Similarity=0.215 Sum_probs=135.2
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEeeC--CCEEEEEeCCCcEEE
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSVHI 248 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~p~--~~~l~s~s~d~~i~v 248 (360)
+..+.||.+.|++++|+|++++|++|+.||+|+|||+. ++..+..+.+|.+.|++++|+|+ ++++++|+.||+|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 45678999999999999999999999999999999998 55788899999999999999988 999999999999999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC--CCEEEEEECCCcEEEEECCCC--
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG-- 324 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~--g~~l~tgs~dg~i~iwd~~~~-- 324 (360)
||+.++.. .....+.+|...|.+++|+|+ +.++++|+.||.|++||++++
T Consensus 82 wd~~~~~~--------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 82 WKEENGRW--------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 135 (753)
T ss_dssp EEEETTEE--------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred EECCCCcc--------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence 99987631 245677889999999999999 999999999999999999877
Q ss_pred eEEEEEecCCCceEEEEEcC-------------CCCEEEccc-ccchh
Q psy11015 325 TILQSLTEPGEAIRAAAGRT-------------GGPIRASPL-LLAIR 358 (360)
Q Consensus 325 ~~~~~l~~h~~~v~~~~~~~-------------~g~~las~~-~~~ir 358 (360)
.....+.+|...|++++|+| ++.++++++ ++.||
T Consensus 136 ~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~ 183 (753)
T 3jro_A 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (753)
T ss_dssp CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEE
T ss_pred cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEE
Confidence 34456778999999999999 477666665 55553
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.7e-22 Score=188.30 Aligned_cols=157 Identities=13% Similarity=0.073 Sum_probs=135.1
Q ss_pred eecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECC--CCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 176 FSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQ--TGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 176 l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~--~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
..+|.+.|++++|+|++++| ++|+.||+|++||+. ++.++..+. +|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 45788999999999999985 999999999999999 888888876 5678999999999999999999999999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC---CCEEEEEECCCcEEEEECCCCeEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~---g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+..+.... .+...+.+|...|++++|+|+ +++|++|+.|+.|++||+.++..+
T Consensus 178 ~~~~~~~~------------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 178 INSIPEEK------------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV 233 (450)
T ss_dssp TTSCCCSS------------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE
T ss_pred cCCccccc------------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee
Confidence 87652110 023456789999999999999 999999999999999999999888
Q ss_pred EE-EecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 328 QS-LTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 328 ~~-l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
.. +.+|...|++++|+ +|.++++++ |+.|
T Consensus 234 ~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 234 DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKI 264 (450)
T ss_dssp EEECCCCSSCEEEEEEC-STTEEEEEESSSEE
T ss_pred eeeecCCCCceEEEEEC-CCCEEEEEeCCCeE
Confidence 77 55899999999999 999888876 4443
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=2.8e-21 Score=203.72 Aligned_cols=136 Identities=27% Similarity=0.414 Sum_probs=124.3
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee--CCCEEEEEeCCC
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDK 244 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p--~~~~l~s~s~d~ 244 (360)
..++..+.++.+|.+.|.+++|+|++.+|++|+.||+|++||+.+++++..+.+|.+.|.+++|+| ++.++++|+.|+
T Consensus 644 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 644 AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred CCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 356778899999999999999999999999999999999999999999999999999999999999 456899999999
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
+|++||+.++ .....+.+|.+.|++++|+|+|+++++|+.||.|++||+.++
T Consensus 724 ~v~vwd~~~~----------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 724 FLKLWDLNQK----------------------------ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp CEEEEETTSS----------------------------SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred eEEEEECCCc----------------------------chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 9999999876 346677899999999999999999999999999999999887
Q ss_pred eEEEEE
Q psy11015 325 TILQSL 330 (360)
Q Consensus 325 ~~~~~l 330 (360)
.....+
T Consensus 776 ~~~~~~ 781 (1249)
T 3sfz_A 776 NERKSI 781 (1249)
T ss_dssp EEEEEE
T ss_pred ccccee
Confidence 765554
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.7e-21 Score=184.16 Aligned_cols=154 Identities=9% Similarity=0.062 Sum_probs=128.8
Q ss_pred eeeeeecCCC-----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-------EEEEE----eCCCcCeEEEEEeeCCC
Q psy11015 172 KIRSFSGHRD-----GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-------CVLQY----SGHSGSVNSVRFLPNKD 235 (360)
Q Consensus 172 ~~~~l~~h~~-----~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-------~~~~~----~~h~~~v~~i~~~p~~~ 235 (360)
++..+. |.. .|.+++|+|+|++|++|+.||+|+|||+.++. .+.++ .+|.+.|.+++|+|+|
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 666677 766 59999999999999999999999999999875 36776 6777899999999999
Q ss_pred EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCC
Q psy11015 236 LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDR 314 (360)
Q Consensus 236 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg 314 (360)
+++++.|++|++||+..+.. .+...++ .+|...|.+++|+ |..+|+++ +|
T Consensus 195 -Laass~D~tVrlWd~~~~~~-------------------------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~ 245 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSH-------------------------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG 245 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSS-------------------------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred -EEEEeCCCeEEEEECCCCcc-------------------------ccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence 88899999999999876521 0123456 4788999999999 68999887 69
Q ss_pred cEEEEECCCCeEEEEEecCCCceEEEEE--cCCCCEEEccc-ccc
Q psy11015 315 VANLFDVETGTILQSLTEPGEAIRAAAG--RTGGPIRASPL-LLA 356 (360)
Q Consensus 315 ~i~iwd~~~~~~~~~l~~h~~~v~~~~~--~~~g~~las~~-~~~ 356 (360)
+|++||+.+++......+|.+.|.+++| +|+|..++++. ++.
T Consensus 246 tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp EEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred eEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 9999999988774444489999999999 99999888888 443
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=2.1e-22 Score=182.04 Aligned_cols=153 Identities=12% Similarity=0.113 Sum_probs=132.7
Q ss_pred eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEE
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIW 249 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vw 249 (360)
....+|.+.|++++|+|++.+|++|+.||.|++|++.++. ....+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998876 3455568999999999999999 99999999999999
Q ss_pred Ec-ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC--CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC---
Q psy11015 250 QA-VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVET--- 323 (360)
Q Consensus 250 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~--- 323 (360)
|+ .++ ....+.+ |...|.+++|+| +.++++++.||.|++||+++
T Consensus 85 d~~~~~-----------------------------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 85 DLIGSP-----------------------------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp CSSSSS-----------------------------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred EeccCC-----------------------------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 98 765 2356677 999999999999 99999999999999999987
Q ss_pred ------CeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 324 ------GTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 324 ------~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
++++..+. |...|.+++|+|++ +++++.++.|+
T Consensus 135 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~ 173 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQ 173 (342)
T ss_dssp BCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEE
T ss_pred ccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEE
Confidence 76666666 88999999999998 65555565543
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.6e-22 Score=202.11 Aligned_cols=170 Identities=11% Similarity=0.049 Sum_probs=135.2
Q ss_pred eeeeecCCeEEEeeecCccceeeee----eee-----cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--------
Q psy11015 150 NKLKVQTSKIVSSFKTSLLSCYKIR----SFS-----GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-------- 212 (360)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~-----~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-------- 212 (360)
....++.++.+..|+.......... .+. +|...|++++|+|++.+||+|+.||+|+|||+.++
T Consensus 449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~ 528 (902)
T 2oaj_A 449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENR 528 (902)
T ss_dssp EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC------
T ss_pred EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCcccc
Confidence 3455667777778876543211001 122 89999999999999999999999999999999765
Q ss_pred -------------------------------------eEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 213 -------------------------------------KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 213 -------------------------------------~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
+++..+.+|.+.|++++|+|+| +|++|+.|++|+|||+.++.
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 529 PESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp ---------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred CCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe
Confidence 3578889999999999999999 99999999999999987653
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEc-----CCC---CEEEEEECCCcEEEEEC---CC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWL-----SDG---EQVITASWDRVANLFDV---ET 323 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~s-----p~g---~~l~tgs~dg~i~iwd~---~~ 323 (360)
.... ..+..+. +|...|++++|+ ||| .+|++|+.||+|++||+ .+
T Consensus 608 ~~~~-----------------------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 608 IIYM-----------------------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp EEEE-----------------------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred EEEE-----------------------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC
Confidence 2210 0112343 899999999999 885 89999999999999999 78
Q ss_pred CeEEEEEecC-----CCceEEEE-Ec
Q psy11015 324 GTILQSLTEP-----GEAIRAAA-GR 343 (360)
Q Consensus 324 ~~~~~~l~~h-----~~~v~~~~-~~ 343 (360)
|++...+.+| .++|.+++ |+
T Consensus 665 g~~~~~~~~~~~~~~~~~v~~i~~~~ 690 (902)
T 2oaj_A 665 GKFDVQLMDITNVTSKGPIHKIDAFS 690 (902)
T ss_dssp GCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred CcEEEEecCceecCCCCceEEEEeEe
Confidence 8888888776 36777776 65
No 105
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=7.8e-22 Score=179.09 Aligned_cols=173 Identities=12% Similarity=0.152 Sum_probs=139.7
Q ss_pred ecCCeEEEeeecCcccee-eeeeeecCCCCEEEEE------ECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEeCCCc--
Q psy11015 154 VQTSKIVSSFKTSLLSCY-KIRSFSGHRDGVWDVA------VRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSG-- 223 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~-~~~~l~~h~~~V~~l~------~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~~h~~-- 223 (360)
+.....+..|... .+. .+..+.+|.+.|.+++ |+|+++.|++|+.||.|++||+.++. ++..+..|.+
T Consensus 86 ~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 163 (357)
T 3i2n_A 86 GDFGGNLHIWNLE--APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN 163 (357)
T ss_dssp EETTSCEEEECTT--SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC
T ss_pred ecCCCeEEEEeCC--CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC
Confidence 3344444445443 334 7788999999999995 57889999999999999999999886 7888876665
Q ss_pred --CeEEEE----EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE
Q psy11015 224 --SVNSVR----FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA 297 (360)
Q Consensus 224 --~v~~i~----~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 297 (360)
.|.+++ |+|++.++++++.|+.|++||++++. ......|...|.+
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------------------------~~~~~~~~~~v~~ 214 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----------------------------LRWETNIKNGVCS 214 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-----------------------------EEEEEECSSCEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-----------------------------eeeecCCCCceEE
Confidence 799998 67899999999999999999998762 2334568889999
Q ss_pred EEEcC---CCCEEEEEECCCcEEEEECCCCeEEEEEe-----cCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015 298 ADWLS---DGEQVITASWDRVANLFDVETGTILQSLT-----EPGEAIRAAAGRTGGP-IRASPL-LLAI 357 (360)
Q Consensus 298 i~~sp---~g~~l~tgs~dg~i~iwd~~~~~~~~~l~-----~h~~~v~~~~~~~~g~-~las~~-~~~i 357 (360)
++|+| ++.++++|+.||.|++||++++..+..+. +|...|++++|+|++. +++++. ++.|
T Consensus 215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL 284 (357)
T ss_dssp EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE
Confidence 99999 99999999999999999998776554443 8999999999999998 677665 4444
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=179.97 Aligned_cols=159 Identities=17% Similarity=0.176 Sum_probs=134.8
Q ss_pred eeeeeeeecCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe-------------CCCcCeEEEEEee-CC
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-------------GHSGSVNSVRFLP-NK 234 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-------------~h~~~v~~i~~~p-~~ 234 (360)
......+.+|.+.|++++|+| ++++|++|+.||.|++||+.++.....+. +|.+.|.+++|+| ++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 345567789999999999999 99999999999999999999875544443 5999999999999 77
Q ss_pred CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC---CCEEEEEE
Q psy11015 235 DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITAS 311 (360)
Q Consensus 235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~---g~~l~tgs 311 (360)
.+|++++.|+.|++||+.++.. ...+ .+...+.+++|+|. +.++++|+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~----------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQT----------------------------ADVF-NFEETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEE----------------------------EEEE-ECSSCEEEEEECSSCSSCCEEEEEE
T ss_pred cEEEEEeCCCeEEEeeCCCCcc----------------------------ceec-cCCCceeeeEeecCCCCCcEEEEEc
Confidence 8999999999999999987632 2333 36778999999984 45999999
Q ss_pred CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc-ccch
Q psy11015 312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL-LLAI 357 (360)
Q Consensus 312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~-~~~i 357 (360)
.||.|++||+++++.+..+..|...|++++|+|++. +++++. ++.|
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i 211 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRV 211 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence 999999999999999999999999999999999998 465554 5544
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=1.7e-20 Score=173.16 Aligned_cols=187 Identities=18% Similarity=0.262 Sum_probs=144.8
Q ss_pred CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQ---PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~---~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+..+..|... ++..+..+. |...+.++.|+|.+ .++++|+.||.|++||+.++.++..+.+|.+.|.+++|+|+
T Consensus 121 d~~i~iwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 121 DKTLKVWDTN--TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp TSEEEEEETT--TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred CCeEEEeeCC--CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 3444444433 445555554 78889999999854 49999999999999999999999999999999999999999
Q ss_pred CC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015 234 KD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312 (360)
Q Consensus 234 ~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~ 312 (360)
+. ++++|+.|+.|++||++++............ ...........+|...|.+++|+|+|++|++|+.
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNG------------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT------------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEcCCCcEEEEECCCCCccccccccccc------------ccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 98 5899999999999999876432221111000 0011123334578999999999999999999999
Q ss_pred CCcEEEEECCCC-----------------------------------------------eEEEEEecCCCceEEEEEcCC
Q psy11015 313 DRVANLFDVETG-----------------------------------------------TILQSLTEPGEAIRAAAGRTG 345 (360)
Q Consensus 313 dg~i~iwd~~~~-----------------------------------------------~~~~~l~~h~~~v~~~~~~~~ 345 (360)
||.|++||+.++ +.+..+.+|...|++++|+|+
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~ 345 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN 345 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT
T ss_pred CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC
Confidence 999999998653 456777889999999999999
Q ss_pred CCEEEccc-ccchh
Q psy11015 346 GPIRASPL-LLAIR 358 (360)
Q Consensus 346 g~~las~~-~~~ir 358 (360)
|.++++++ |+.|+
T Consensus 346 ~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 346 FQELYSGSRDCNIL 359 (408)
T ss_dssp TTEEEEEETTSCEE
T ss_pred CCEEEEECCCCeEE
Confidence 99888876 54443
No 108
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.3e-21 Score=197.56 Aligned_cols=183 Identities=10% Similarity=0.019 Sum_probs=144.1
Q ss_pred eecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 153 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
.+..+..+.+|... .......+ .|...|++++|+| +.+|++++.|++|++||+.+++++..+. |.+.|++++|+|
T Consensus 34 sgs~Dg~I~lw~~~--~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp 108 (902)
T 2oaj_A 34 IATVTGEVHIYGQQ--QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDA 108 (902)
T ss_dssp EEETTSEEEEECST--TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCT
T ss_pred EEeCCCEEEEEeCC--CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECC
Confidence 34445556666543 33443333 5889999999999 7799999999999999999999999987 778999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEEEEEE
Q psy11015 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITAS 311 (360)
Q Consensus 233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs 311 (360)
+++++++|+.||+|++||+.++........ ..+.....+.+|.+.|.+++|+|+ +..+++|+
T Consensus 109 ~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~-----------------~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 109 SLDWMLIGLQNGSMIVYDIDRDQLSSFKLD-----------------NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp TCSEEEEEETTSCEEEEETTTTEEEEEEEC-----------------CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEECCCCccccceec-----------------cccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 999999999999999999987743210000 000000234679999999999996 57899999
Q ss_pred CCCcEEEEECCCCeEEEEEecC------------------CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 312 WDRVANLFDVETGTILQSLTEP------------------GEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 312 ~dg~i~iwd~~~~~~~~~l~~h------------------~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.||.| +||+++++++..+..| ...|++++|+|+|.++||++ |+.||
T Consensus 172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence 99999 9999999999888766 46799999999999998877 44443
No 109
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=1.1e-20 Score=178.34 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=137.8
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~ 252 (360)
+..+.+|...|.++. ++++.+++|+.||.|++||+.+++++..+.+|...|.+++|+|+++++++|+.|++|++||+.
T Consensus 263 ~~~~~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 263 VGVLRGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEEECCCSSCEEEEE--EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEEccCccceEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 667889999999884 557899999999999999999999999999999999999999999999999999999999998
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
++ .++..+.+|...|.+++|+ +.++++|+.||.|++||+.++.......
T Consensus 341 ~~----------------------------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~- 389 (464)
T 3v7d_B 341 NG----------------------------ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH- 389 (464)
T ss_dssp TT----------------------------EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CC----------------------------cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-
Confidence 76 3567788999999999996 6899999999999999999988766664
Q ss_pred CCCceEEEEEcCCCCEEEcccccchh
Q psy11015 333 PGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 333 h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
|...+..++|+|++.+++++.++.|+
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~dg~i~ 415 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGSENQFN 415 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEETTEEE
T ss_pred CCCCccEEEEEeCCCEEEEecCCeEE
Confidence 66778889999999999999987764
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=3.1e-21 Score=188.00 Aligned_cols=168 Identities=15% Similarity=0.132 Sum_probs=147.5
Q ss_pred eEEEeeecCccce----eeeeeeecCCCC-EEEEEECC--CCCEEEEEeCCCcEEEEECCCC--------eEEEEEeCCC
Q psy11015 158 KIVSSFKTSLLSC----YKIRSFSGHRDG-VWDVAVRP--GQPVLGSASADRTVRLWSTQTG--------KCVLQYSGHS 222 (360)
Q Consensus 158 ~~~~~~~~~~~~~----~~~~~l~~h~~~-V~~l~~~~--~~~~l~sgs~Dg~v~iwd~~~~--------~~~~~~~~h~ 222 (360)
..+..|... ++ .....+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ ..+..+.+|.
T Consensus 39 ~~v~v~~~~--~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 116 (615)
T 1pgu_A 39 KSAFVRCLD--DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA 116 (615)
T ss_dssp TEEEEEECC--SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS
T ss_pred CeEEEEECC--CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc
Confidence 345555544 45 788899999999 99999999 9999999999999999999754 7788889999
Q ss_pred cCeEEEEEeeCCCEEEEEeCC----CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEE
Q psy11015 223 GSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA 298 (360)
Q Consensus 223 ~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i 298 (360)
+.|.+++|+|+++++++++.+ +.|.+||.. ..+..+.+|...|.++
T Consensus 117 ~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~------------------------------~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG------------------------------NSLGEVSGHSQRINAC 166 (615)
T ss_dssp SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC------------------------------CEEEECCSCSSCEEEE
T ss_pred ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC------------------------------CcceeeecCCccEEEE
Confidence 999999999999999999988 688888732 2466778999999999
Q ss_pred EEcCCCC-EEEEEECCCcEEEEECCCCeEEEEEecCCC---ceEEEEEcCC-CCEEEccc-ccch
Q psy11015 299 DWLSDGE-QVITASWDRVANLFDVETGTILQSLTEPGE---AIRAAAGRTG-GPIRASPL-LLAI 357 (360)
Q Consensus 299 ~~sp~g~-~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~---~v~~~~~~~~-g~~las~~-~~~i 357 (360)
+|+|+++ .+++|+.||.|++||+.+++.+..+.+|.. .|++++|+|+ |.+++++. ++.|
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 9999998 899999999999999999999999999999 9999999999 99888766 4444
No 111
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=1e-20 Score=184.36 Aligned_cols=174 Identities=20% Similarity=0.161 Sum_probs=150.9
Q ss_pred ecCCeEEEeeecCcc------ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCc
Q psy11015 154 VQTSKIVSSFKTSLL------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSG 223 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~------~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D----g~v~iwd~~~~~~~~~~~~h~~ 223 (360)
+..+..+..|..... ....+..+.+|.+.|.+++|+|++.+|++++.| +.|++|| .++.+..+.+|..
T Consensus 84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~ 161 (615)
T 1pgu_A 84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ 161 (615)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS
T ss_pred ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc
Confidence 444555566665444 567888999999999999999999999999988 6888888 6778899999999
Q ss_pred CeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC---cEEEEE
Q psy11015 224 SVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---VVIAAD 299 (360)
Q Consensus 224 ~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~i~ 299 (360)
.|.+++|+|+++ .+++++.|+.|++||+.++ ..+..+.+|.. .|.+++
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----------------------------~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPF----------------------------KFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTB----------------------------EEEEEECSSSCTTCCEEEEE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc----------------------------ceeeeecccCCCCceEEEEE
Confidence 999999999998 8999999999999998765 34567778988 999999
Q ss_pred EcCC-CCEEEEEECCCcEEEEECCCCeEEEEE-e---cCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 300 WLSD-GEQVITASWDRVANLFDVETGTILQSL-T---EPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 300 ~sp~-g~~l~tgs~dg~i~iwd~~~~~~~~~l-~---~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
|+|+ +++|++|+.||.|++||+.+++.+..+ . .|...|++++|+ ++.+++++. ++.||
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence 9999 999999999999999999999999999 6 899999999999 998888776 44443
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=2.5e-20 Score=174.90 Aligned_cols=197 Identities=20% Similarity=0.263 Sum_probs=148.1
Q ss_pred eeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015 152 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~ 231 (360)
+.+..+..+..|.. .++..+..+.+|.+.|++++| ++..|++|+.||+|++||+.+++++..+.+|.+.|.+++|+
T Consensus 147 ~~g~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 222 (435)
T 1p22_A 147 VSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 222 (435)
T ss_dssp EEEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC
T ss_pred EEEeCCCeEEEEeC--CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc
Confidence 34445555555554 567788999999999999999 57799999999999999999999999999999999999996
Q ss_pred eCCCEEEEEeCCCcEEEEEcccCeeE---eeeCCCCCCCCCC-------CCCCCCC-----ccccccceeEeeCCCCcEE
Q psy11015 232 PNKDLVLSASGDKSVHIWQAVINWEC---LVSNNDNDSDLDE-------SKEPDES-----SITLRTPVKELLGHSNVVI 296 (360)
Q Consensus 232 p~~~~l~s~s~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~h~~~v~ 296 (360)
+.++++|+.|++|++||+.++... .....+....... .....+. .......+..+.+|...|.
T Consensus 223 --~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 300 (435)
T 1p22_A 223 --NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 300 (435)
T ss_dssp --TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred --CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence 459999999999999999876543 1111111111000 0001111 1233456778888888888
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
+++| +++++++|+.||.|++||+++++++..+.+|...|++++| ++.++++++ |+.||
T Consensus 301 ~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 301 CLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 8887 8888888888888999988888888888888888888888 666666655 55554
No 113
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=4.8e-21 Score=175.82 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=109.1
Q ss_pred eeeeeecCCCCEEEEEECCCCCEEEEEeCCC----cEEEEECCCCeE----EEEEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADR----TVRLWSTQTGKC----VLQYSGHSGSVNSVRFLPNKDLVLSASGD 243 (360)
Q Consensus 172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg----~v~iwd~~~~~~----~~~~~~h~~~v~~i~~~p~~~~l~s~s~d 243 (360)
......+|...|.+++|+|++..+++++.|+ ++++|++..+.. ...+.+|...|++++|+|+|++|++|+.|
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 3345678999999999999999999999987 688899877643 45678899999999999999999999999
Q ss_pred CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeE-eeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
++|+|||+.++ .++.. +.+|...|++++|+|+|++||+||.|++|+|||+.
T Consensus 291 ~~V~iwd~~~~----------------------------~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 291 NSIALVKLKDL----------------------------SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCEEEEETTTT----------------------------EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CEEEEEECCCC----------------------------cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999876 33444 46899999999999999999999999999999986
Q ss_pred C
Q psy11015 323 T 323 (360)
Q Consensus 323 ~ 323 (360)
.
T Consensus 343 ~ 343 (365)
T 4h5i_A 343 L 343 (365)
T ss_dssp T
T ss_pred C
Confidence 4
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=4.1e-20 Score=173.79 Aligned_cols=200 Identities=20% Similarity=0.249 Sum_probs=161.9
Q ss_pred eeeeeecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEE
Q psy11015 149 TNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228 (360)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i 228 (360)
...+.+..+..+..|.... +..+..+.+|.+.|.+++| ++..+++|+.||.|++||+.+++++..+.+|.+.|.++
T Consensus 210 ~~l~s~s~dg~i~~wd~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIET--GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp TEEEEEETTSEEEEEESSS--CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCEEEEEECCC--CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence 3578888888889899764 5678889999999999999 57799999999999999999999999999999999999
Q ss_pred EEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC-------CCCCCC-----ccccccceeEeeC---CCC
Q psy11015 229 RFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES-------KEPDES-----SITLRTPVKELLG---HSN 293 (360)
Q Consensus 229 ~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~---h~~ 293 (360)
+| ++.++++|+.|++|++||+.++........+........ ....+. ......++..+.+ |..
T Consensus 286 ~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 286 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp EE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred EE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 99 788999999999999999999887766544422211110 011111 1223345666665 888
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-----ecCCCceEEEEEcCCCCEEEcccccc
Q psy11015 294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-----TEPGEAIRAAAGRTGGPIRASPLLLA 356 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-----~~h~~~v~~~~~~~~g~~las~~~~~ 356 (360)
.|.+++|+ ++++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|.++|++...+
T Consensus 364 ~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 364 AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 99999995 689999999999999999999999888 46888999999999999999887544
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.87 E-value=6e-21 Score=172.43 Aligned_cols=203 Identities=8% Similarity=-0.049 Sum_probs=149.7
Q ss_pred eeecCCeEEEeeecCccc-eeeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEEC-CCCeEEEEEeC--CCcCeE
Q psy11015 152 LKVQTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST-QTGKCVLQYSG--HSGSVN 226 (360)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~-~~~~~~~~~~~--h~~~v~ 226 (360)
+.+.....+..|...... ......+.+|.+.|.+++|+|++. +|++|+.||.|++||+ .++.. ..+.+ |...|.
T Consensus 27 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 27 LITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGIC 105 (342)
T ss_dssp EEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEE
T ss_pred EEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceE
Confidence 344455566666655433 234566679999999999999999 9999999999999999 77754 77888 999999
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEEccc---------CeeEeeeCCCCCCCCC-------CCCCCCCCccc-----c---c
Q psy11015 227 SVRFLPNKDLVLSASGDKSVHIWQAVI---------NWECLVSNNDNDSDLD-------ESKEPDESSIT-----L---R 282 (360)
Q Consensus 227 ~i~~~p~~~~l~s~s~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~---~ 282 (360)
+++|+| +.++++++.|+.|++||+.+ +....... +...... ........... . .
T Consensus 106 ~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 106 RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTC
T ss_pred EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccc
Confidence 999999 99999999999999999986 43222221 1100000 00000111111 1 0
Q ss_pred cceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCC------eEEEEEecCCC---------ceEEEEEcCCC
Q psy11015 283 TPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETG------TILQSLTEPGE---------AIRAAAGRTGG 346 (360)
Q Consensus 283 ~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~------~~~~~l~~h~~---------~v~~~~~~~~g 346 (360)
........|...|.+++|+| +++++++|+.||.+++|++..+ +....+..|.. .|++++|+|+|
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 263 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC
Confidence 12224456788999999999 9999999999999999999887 77788888865 99999999999
Q ss_pred CEEEccc-ccch
Q psy11015 347 PIRASPL-LLAI 357 (360)
Q Consensus 347 ~~las~~-~~~i 357 (360)
.+++++. ++.|
T Consensus 264 ~~l~~~~~dg~i 275 (342)
T 1yfq_A 264 KFLYTAGSDGII 275 (342)
T ss_dssp CCEEEEETTSCE
T ss_pred CEEEEecCCceE
Confidence 9888776 4444
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=3.2e-20 Score=174.55 Aligned_cols=195 Identities=23% Similarity=0.375 Sum_probs=144.9
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~ 233 (360)
+..++.+..|.. .++..+..+.+|.+.|++++|+ ++.+++|+.||+|++||+.+++++..+.+|.+.|.++.|+
T Consensus 135 g~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-- 208 (445)
T 2ovr_B 135 GSDDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-- 208 (445)
T ss_dssp EETTSCEEEEET--TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--
T ss_pred EECCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--
Confidence 444444445544 4677889999999999999998 5599999999999999999999999999999999999995
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC-------CCCCCC-----ccccccceeEeeCCCCcEEEEEEc
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES-------KEPDES-----SITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
+..+++|+.|++|++||+.++........+........ ....+. ......++..+.+|...|.+++|
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~- 287 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF- 287 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-
Confidence 56899999999999999998765554433322111110 001111 12334566777788888888887
Q ss_pred CCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 302 SDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 302 p~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
++.++++|+.||.|++||+++++.+..+.+|...+.++.+ ++.++++++ ++.|+
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 342 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 342 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEE
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEE
Confidence 8888888888888888888888888888888887776655 666666555 45443
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.86 E-value=2.2e-20 Score=175.27 Aligned_cols=151 Identities=24% Similarity=0.381 Sum_probs=133.4
Q ss_pred eeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251 (360)
Q Consensus 172 ~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~ 251 (360)
....+.+|.+.|.+++| +++.+++|+.||+|++||+.+++++..+.+|...|.++.| ++.++++|+.|++|++||+
T Consensus 248 ~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 248 LRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred eeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 34778899999999999 5779999999999999999999999999999999999999 4679999999999999999
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe------
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT------ 325 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~------ 325 (360)
.++ .++..+.+|...|.+++| ++.+|++|+.||.|++||+.++.
T Consensus 324 ~~~----------------------------~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 373 (435)
T 1p22_A 324 ECG----------------------------ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPA 373 (435)
T ss_dssp TTC----------------------------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCT
T ss_pred CCC----------------------------CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccc
Confidence 876 356778899999999999 78999999999999999997766
Q ss_pred ---EEEEEecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 326 ---ILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 326 ---~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
++..+.+|.+.|++++| ++.++++++ |+.|+
T Consensus 374 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 374 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 408 (435)
T ss_dssp TTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEE
T ss_pred cchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEE
Confidence 88999999999999999 455555555 66654
No 118
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=3.3e-21 Score=180.96 Aligned_cols=147 Identities=12% Similarity=0.073 Sum_probs=123.8
Q ss_pred cCCCCEEEEEECCCCCEEE----EEeCCCcEEEEECCCC--------e---EEEEEeCCCcCeEEEEEeeC-CCEEEEEe
Q psy11015 178 GHRDGVWDVAVRPGQPVLG----SASADRTVRLWSTQTG--------K---CVLQYSGHSGSVNSVRFLPN-KDLVLSAS 241 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~----sgs~Dg~v~iwd~~~~--------~---~~~~~~~h~~~v~~i~~~p~-~~~l~s~s 241 (360)
.|.+.|++++|+|++++|+ +|+.|++|+|||+.++ + .+..+.+|.+.|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4677899999999999999 8899999999998654 2 24566789999999999998 78999999
Q ss_pred CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015 242 GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321 (360)
Q Consensus 242 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~ 321 (360)
.||+|++||++++. ......+|...|.+++|+|+|++|++|+.||.|++||+
T Consensus 170 ~Dg~v~iwD~~~~~----------------------------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 170 ADGSIAVLQVTETV----------------------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp TTSCEEEEEESSSE----------------------------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CCCeEEEEEcCCCc----------------------------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 99999999998762 23345578889999999999999999999999999999
Q ss_pred CCCeEEEEEecCC-------CceEEEEEcCCCCEEEccc
Q psy11015 322 ETGTILQSLTEPG-------EAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 322 ~~~~~~~~l~~h~-------~~v~~~~~~~~g~~las~~ 353 (360)
+ ++....+..|. ..|.+++|++++.++++..
T Consensus 222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred C-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 8 66666665442 3899999999998886443
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=3.2e-20 Score=169.67 Aligned_cols=131 Identities=15% Similarity=0.165 Sum_probs=104.5
Q ss_pred EeCCCcEEEEECCCCe----------------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-EEEEEcccCeeEeee
Q psy11015 198 ASADRTVRLWSTQTGK----------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIWQAVINWECLVS 260 (360)
Q Consensus 198 gs~Dg~v~iwd~~~~~----------------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~-i~vwd~~~~~~~~~~ 260 (360)
|+.||.|++||+.++. ++..+.+|.+.|.+++|+|+|.+|++|+.|++ |++||+.++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~------ 228 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG------ 228 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC------
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC------
Confidence 5789999999998765 27889999999999999999999999999999 999999876
Q ss_pred CCCCCCCCCCCCCCCCCccccccceeEee-C-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--EEEE------
Q psy11015 261 NNDNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL------ 330 (360)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~--~~~l------ 330 (360)
.++..+. + |...|.+++|+|+|++|++|+.||+|++||+..+.. ...+
T Consensus 229 ----------------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~ 286 (355)
T 3vu4_A 229 ----------------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINM 286 (355)
T ss_dssp ----------------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEEC
T ss_pred ----------------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeec
Confidence 3456676 5 999999999999999999999999999999976531 1111
Q ss_pred --------------e-cCCCceEEEEEcCCCCEEEccc-ccc
Q psy11015 331 --------------T-EPGEAIRAAAGRTGGPIRASPL-LLA 356 (360)
Q Consensus 331 --------------~-~h~~~v~~~~~~~~g~~las~~-~~~ 356 (360)
. .+..+...++|+++|..++++. ++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 287 KYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp CCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred cccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 0 1122346789999998777654 443
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.85 E-value=3.9e-21 Score=178.16 Aligned_cols=152 Identities=17% Similarity=0.125 Sum_probs=114.9
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----EEeCCCcCeEEEEEee--------CCCEEEEEeCCC
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLP--------NKDLVLSASGDK 244 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-----~~~~h~~~v~~i~~~p--------~~~~l~s~s~d~ 244 (360)
+|.+.+....+.+++.+|++|+.|++|++||+.++.+.. .+.||.+.|++++|+| ++++|++||.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344445555566677789999999999999999886433 3679999999999998 788999999999
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCC-EEEEEECCCcEEEEECCC
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVET 323 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~-~l~tgs~dg~i~iwd~~~ 323 (360)
+|+|||+.++ .+...+.+|...|.+++|+|++. +|++|+.||+|++||+++
T Consensus 167 tv~~Wd~~~~----------------------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 167 TLIIWRLTDE----------------------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEETT----------------------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred eEEEEECCCC----------------------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 9999998765 24555667889999999999875 799999999999999998
Q ss_pred CeEEEEE-------------------------ecCCCceEEEEEc-CCCCEEEccc-ccch
Q psy11015 324 GTILQSL-------------------------TEPGEAIRAAAGR-TGGPIRASPL-LLAI 357 (360)
Q Consensus 324 ~~~~~~l-------------------------~~h~~~v~~~~~~-~~g~~las~~-~~~i 357 (360)
++..... .+|...+.+++|+ |+|..++++. +..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 7654332 3567788899986 7888887765 4433
No 121
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.83 E-value=5e-19 Score=165.27 Aligned_cols=143 Identities=24% Similarity=0.384 Sum_probs=111.7
Q ss_pred eeeeeeecCCCCEEEEEECCCCC-EEEE--EeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe--CCCc
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQP-VLGS--ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKS 245 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~-~l~s--gs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s--~d~~ 245 (360)
..+....+|.+.|.+++|+|.+. ++++ |+.|++|++||+.++.++..+..| ..+.++.|+|++..+++++ .|++
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCC
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCE
Confidence 34567788999999999999765 5555 458999999999999999999854 6789999999999888765 6899
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~ 325 (360)
|+|||+.++ .++..+.+|.+.|++++|+|+|.+|+||+.||+|+|||+....
T Consensus 346 I~iwd~~~~----------------------------~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 346 LVIWKYPTM----------------------------AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEETTTC----------------------------CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEEECCCC----------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999876 4677889999999999999999999999999999999998776
Q ss_pred EEEEEecCCCceEEEEE
Q psy11015 326 ILQSLTEPGEAIRAAAG 342 (360)
Q Consensus 326 ~~~~l~~h~~~v~~~~~ 342 (360)
+......+...+....+
T Consensus 398 ~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 398 PARRREREKASAAKSSL 414 (420)
T ss_dssp CC---------------
T ss_pred ccchhhhccCCcccccc
Confidence 66666555554444444
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.82 E-value=1.2e-18 Score=155.47 Aligned_cols=143 Identities=18% Similarity=0.256 Sum_probs=122.3
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015 183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS 260 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 260 (360)
+++|+|++++ +|++| .|++|+|||+.+++++..+. +|...|.+++|+|+++++++|+.|++|++||+.++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~------ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------ 99 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc------
Confidence 4679999876 66665 59999999999999888775 67778999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC-eEEEEEecCCCceEE
Q psy11015 261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPGEAIRA 339 (360)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~-~~~~~l~~h~~~v~~ 339 (360)
..+..+.+|...+.++.+ ++..+++|+.++.+++|+..++ ..+..+.+|...+..
T Consensus 100 ----------------------~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 100 ----------------------KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 155 (318)
T ss_dssp ----------------------EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ----------------------eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence 346678899988877665 6789999999999999998865 566788899999999
Q ss_pred EEEcCCCCEEEcccc-cch
Q psy11015 340 AAGRTGGPIRASPLL-LAI 357 (360)
Q Consensus 340 ~~~~~~g~~las~~~-~~i 357 (360)
++|+++|.+++++.. +.|
T Consensus 156 ~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 156 LRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp EEECTTSSEEEEEETTSCE
T ss_pred EEEcCCCCEEEEEecCcce
Confidence 999999998888764 444
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=1.5e-18 Score=154.52 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=109.4
Q ss_pred CEEEEEECCC----CCEEEEEeC--------------------CCcEEEEEC-CCCeEEEEEeCCCcCeEEEEEee---C
Q psy11015 182 GVWDVAVRPG----QPVLGSASA--------------------DRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP---N 233 (360)
Q Consensus 182 ~V~~l~~~~~----~~~l~sgs~--------------------Dg~v~iwd~-~~~~~~~~~~~h~~~v~~i~~~p---~ 233 (360)
.|++++++|+ ++.+++++. |+.|++|++ .+|+.+..+.+|...++.++|+| +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 5667777778 777777653 889999999 45888888889999999999999 7
Q ss_pred CCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEE---
Q psy11015 234 KDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQV--- 307 (360)
Q Consensus 234 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l--- 307 (360)
+.+|++|+.|++|+|||+.++. .+.++.+|. ..+.+++|+|+|.++
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk----------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQ----------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCC----------------------------EEEEEECCC---CCCEEEEEEETTEEEEEE
T ss_pred CceEEEecCCCcEEEEECCCCc----------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEe
Confidence 7899999999999999999873 456666543 367788999999876
Q ss_pred ---------EEEECCCcEEEEECCCCeEEEEE-----ecCCCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 308 ---------ITASWDRVANLFDVETGTILQSL-----TEPGEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 308 ---------~tgs~dg~i~iwd~~~~~~~~~l-----~~h~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++|+++ |++||
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIk 308 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIA 308 (356)
T ss_dssp C------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEE
T ss_pred ccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEE
Confidence 56889999999999999988776 3565555444443 67777765 55554
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.79 E-value=1.4e-17 Score=155.43 Aligned_cols=162 Identities=12% Similarity=0.110 Sum_probs=131.9
Q ss_pred eEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC
Q psy11015 158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234 (360)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~ 234 (360)
..+..|... +...+.+.+|.+.|.+++|+|+|+.|++++.|+ .|++||+.++++. .+..|.+.+.+++|+|+|
T Consensus 159 ~~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 159 YELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTS
T ss_pred ceEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCC
Confidence 444455543 345678889999999999999999999999885 9999999998875 466788899999999999
Q ss_pred CEEE-EEeCCCc--EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015 235 DLVL-SASGDKS--VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 311 (360)
Q Consensus 235 ~~l~-s~s~d~~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs 311 (360)
+.|+ +++.|+. |.+||+.++ ....+..|...+.+++|+|+|++|++++
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~-----------------------------~~~~l~~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASG-----------------------------QIRQVTDGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTC-----------------------------CEEECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEEecCCCceEEEEECCCC-----------------------------CEEeCcCCCCcccceEECCCCCEEEEEE
Confidence 9777 6666665 999998766 2355667888999999999999999888
Q ss_pred C-CC--cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 312 W-DR--VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 312 ~-dg--~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
. +| .|.+||+.+++. ..+..+...+.+++|+|+|++++++.
T Consensus 286 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp CTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred CCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEE
Confidence 6 45 677889988763 45566778899999999999888665
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=1.9e-17 Score=152.56 Aligned_cols=166 Identities=12% Similarity=0.145 Sum_probs=132.6
Q ss_pred ecCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
+..+..+..|.. .+++.+..+.+|.. +.+++|+|++..+ ++++.|++|++||+.+++.+..+..+. .+.+++|+|
T Consensus 8 ~~~d~~v~v~d~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp 83 (391)
T 1l0q_A 8 NSESDNISVIDV--TSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP 83 (391)
T ss_dssp ETTTTEEEEEET--TTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred cCCCCEEEEEEC--CCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC
Confidence 444455555554 45677778887754 8999999999966 778899999999999999999988655 899999999
Q ss_pred CCCEEEE-EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEE
Q psy11015 233 NKDLVLS-ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITA 310 (360)
Q Consensus 233 ~~~~l~s-~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tg 310 (360)
++++++. ++.|+.|++||+.++.. +..+.. ...+.+++|+|+|+++ +++
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~----------------------------~~~~~~-~~~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTV----------------------------AGTVKT-GKSPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEE----------------------------EEEEEC-SSSEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCeE----------------------------EEEEeC-CCCcceEEECCCCCEEEEEe
Confidence 9997754 55679999999987632 333433 4568999999999987 688
Q ss_pred ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEE-Eccc
Q psy11015 311 SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIR-ASPL 353 (360)
Q Consensus 311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l-as~~ 353 (360)
+.|+.|++||+.+++.+..+..+ ..+.+++|+|+|..+ +++.
T Consensus 135 ~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 135 NGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeC
Confidence 88999999999999999888765 457999999999866 4433
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=1.3e-17 Score=155.78 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=127.7
Q ss_pred eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCCCcEEEEEccc
Q psy11015 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQAVI 253 (360)
Q Consensus 175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d~~i~vwd~~~ 253 (360)
.+.+|.+.|++++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 5568999999999999999999999999999999999999999999999999999999999875 455799999999987
Q ss_pred CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--------CCCcEEEEECCCCe
Q psy11015 254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--------WDRVANLFDVETGT 325 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--------~dg~i~iwd~~~~~ 325 (360)
+.. +..+.. ...+.+++|+|+|+++++++ .||.|++||+.+++
T Consensus 244 ~~~----------------------------~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 244 KLE----------------------------IRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp TEE----------------------------EEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred CcE----------------------------EEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 632 333333 34589999999999999888 58899999999998
Q ss_pred EEEEEecCCCceEEEEEcCCCC-EEEc-ccccch
Q psy11015 326 ILQSLTEPGEAIRAAAGRTGGP-IRAS-PLLLAI 357 (360)
Q Consensus 326 ~~~~l~~h~~~v~~~~~~~~g~-~las-~~~~~i 357 (360)
.+..+. |...+.+++|+|+|+ ++++ +.++.|
T Consensus 295 ~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 295 LIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp EEEEEE-EEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred EEeecc-CCCCcceEEECCCCCEEEEEecCCCEE
Confidence 877764 556899999999996 4454 344443
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=8.2e-18 Score=157.08 Aligned_cols=155 Identities=12% Similarity=0.019 Sum_probs=130.6
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-----EEeCCCcCeEEEEEeeCCCEEEEEeCC
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLPNKDLVLSASGD 243 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-----~~~~h~~~v~~i~~~p~~~~l~s~s~d 243 (360)
....+..+..+. .+.+++|+|++.++++++.|+.|++||+.+++.+. .+.+|.+.|.+++|+|++.++++++.|
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 112 THRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp SEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred cceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC
Confidence 336666776664 45599999977788888899999999999998877 445788999999999999999999999
Q ss_pred CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECC
Q psy11015 244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE 322 (360)
Q Consensus 244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~ 322 (360)
+.|++||+.++ ..+..+..|...+.+++|+|++++++++ +.|+.|++||+.
T Consensus 191 ~~v~~~d~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 191 NAVHVFDLKTL----------------------------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp TEEEEEETTTC----------------------------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEECCCc----------------------------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 99999998765 3455666888999999999999988554 479999999999
Q ss_pred CCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 323 TGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 323 ~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
+++.+..+..+ ..+.+++|+|+|.+++++.
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEE
Confidence 99998888754 4699999999998877765
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=6.8e-17 Score=148.75 Aligned_cols=163 Identities=16% Similarity=0.120 Sum_probs=130.7
Q ss_pred CeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEE-EEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC
Q psy11015 157 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~ 235 (360)
+..+..|. ..+++.+..+..|. .+.+++|+|+++.|+ +++.|+.|++||+.+++.+..+..| ..+.+++|+|+++
T Consensus 53 d~~i~v~d--~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 53 SNDVSIID--TATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGK 128 (391)
T ss_dssp GTEEEEEE--TTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSS
T ss_pred CCeEEEEE--CCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCC
Confidence 33444444 34667777777766 999999999999775 5557799999999999998888854 5789999999999
Q ss_pred EE-EEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECC
Q psy11015 236 LV-LSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWD 313 (360)
Q Consensus 236 ~l-~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~d 313 (360)
.+ ++++.|+.|++||+.++. ....+..| ..+.+++|+|+|+++ ++++.|
T Consensus 129 ~l~~~~~~~~~v~~~d~~~~~----------------------------~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 129 KLYVTNNGDKTVSVINTVTKA----------------------------VINTVSVG-RSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE----------------------------EEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEeCCCCEEEEEECCCCc----------------------------EEEEEecC-CCcceEEECCCCCEEEEEeCCC
Confidence 77 688889999999998763 23444444 456899999999988 677889
Q ss_pred CcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 314 RVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 314 g~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
+.|++||+.+++.+..+. +...+.+++|+|+|.+++++.
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEe
Confidence 999999999999888876 456799999999998777664
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=2.2e-18 Score=161.71 Aligned_cols=159 Identities=11% Similarity=-0.003 Sum_probs=121.6
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------e-----EEEEEeCCCcCeEEEEEeeCCCEEE----E
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-----------K-----CVLQYSGHSGSVNSVRFLPNKDLVL----S 239 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~-----------~-----~~~~~~~h~~~v~~i~~~p~~~~l~----s 239 (360)
...+..+++++++.++++|+.|+ +++|+.... . ....+ .|.+.|.+++|+|+|++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence 34678899999999999999998 888875310 1 11122 3667899999999999999 7
Q ss_pred EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC-CCEEEEEECCCcEEE
Q psy11015 240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANL 318 (360)
Q Consensus 240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~-g~~l~tgs~dg~i~i 318 (360)
|+.|++|++||+.++..... ...........+.+|...|.+++|+|+ +.+|++|+.||+|++
T Consensus 114 gs~d~~v~iwd~~~~~~~~~-----------------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAK-----------------QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTC-----------------SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred cCCCceEEEEEccccccCCc-----------------CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 88999999999875410000 000000124456679999999999998 889999999999999
Q ss_pred EECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc-ccch
Q psy11015 319 FDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~-~~~i 357 (360)
||++++..+....+|...|++++|+|+|.+++++. |+.|
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v 216 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTV 216 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcE
Confidence 99999988777778899999999999999888776 4444
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=2.6e-16 Score=146.80 Aligned_cols=153 Identities=14% Similarity=0.077 Sum_probs=121.8
Q ss_pred ceeeeeeeecCCCCEEEEEECCCCCEEE-EEeCCCc--EEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC
Q psy11015 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK 244 (360)
Q Consensus 169 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~--v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~ 244 (360)
+++. ..+.+|.+.+.+++|+|+|+.|+ +++.|+. |++||+.+++. ..+..|.+.+.+++|+|+|+.|++++. ++
T Consensus 212 tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g 289 (415)
T 2hqs_A 212 NGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAG 289 (415)
T ss_dssp TCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCC
Confidence 4443 35778889999999999999777 7777665 99999998876 567778899999999999998888876 45
Q ss_pred --cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC---CcEEEE
Q psy11015 245 --SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLF 319 (360)
Q Consensus 245 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d---g~i~iw 319 (360)
.|.+||+.++ ....+..|...+.+++|+|+|++|++++.+ +.|.+|
T Consensus 290 ~~~i~~~d~~~~-----------------------------~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 290 RPQVYKVNINGG-----------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp SCEEEEEETTSS-----------------------------CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred CcEEEEEECCCC-----------------------------CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 5777787765 233445567789999999999999888764 589999
Q ss_pred ECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
|+.+++. ..+..+. .+.+++|+|+|.+++++..
T Consensus 341 d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 341 DLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp ETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred ECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 9998876 4555554 8999999999998776653
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=3.6e-15 Score=130.82 Aligned_cols=149 Identities=12% Similarity=0.005 Sum_probs=115.1
Q ss_pred eeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCC-cCeEEEEEeeCCCEEEEEe--CCCcEEEEE
Q psy11015 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHS-GSVNSVRFLPNKDLVLSAS--GDKSVHIWQ 250 (360)
Q Consensus 175 ~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-~~~~~~~~~h~-~~v~~i~~~p~~~~l~s~s--~d~~i~vwd 250 (360)
.+..|.+.|.+++|+|++++|++++ ++.|++||+.+ ++......+|. ..+.+++|+|+++++++++ .++...||.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 5567899999999999999999987 78999999999 88777766663 6789999999999999998 445666666
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEEC--CCCeEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--ETGTIL 327 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~--~~~~~~ 327 (360)
+.... .....+..+. .+..++|+|+|++|+ +++.|+.++||++ .++. .
T Consensus 115 ~~~~~---------------------------~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~ 165 (297)
T 2ojh_A 115 LPSTG---------------------------GTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-E 165 (297)
T ss_dssp EETTC---------------------------CCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-E
T ss_pred EECCC---------------------------CceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-c
Confidence 53210 0123333333 488899999999887 7888999999985 3443 4
Q ss_pred EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 328 QSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
..+..+...+.+++|+|+|.+++.+.
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred eEcccCCCccccceECCCCCEEEEEe
Confidence 56667888999999999999776543
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=3.5e-15 Score=130.94 Aligned_cols=153 Identities=14% Similarity=0.192 Sum_probs=119.2
Q ss_pred eeeecCCCCEEEEEECCCCCEEE-EEeCCCcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcEEEEE
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQ 250 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i~vwd 250 (360)
..+..+. .+.+++|+|+++.|+ +++.|+.++||+++. +.....+..|...+.+++|+|+|+.++.++ .++.+.+|+
T Consensus 123 ~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 123 RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWR 201 (297)
T ss_dssp EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEE
Confidence 3444443 489999999999776 788999999999632 234456667888999999999999887666 589999998
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----------CcEEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----------RVANLF 319 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----------g~i~iw 319 (360)
+... ......+..|...+.+++|+|+|++|++++.+ +.|.+|
T Consensus 202 ~~~~---------------------------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 202 VRVD---------------------------GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EETT---------------------------SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred ECCC---------------------------CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 7522 12345566777889999999999999888766 569999
Q ss_pred ECCCCeE--EEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 320 DVETGTI--LQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 320 d~~~~~~--~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
|+.+++. +..+.+|...+.+++|+|+|..++++..
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred ecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 9988765 4455578889999999999998876654
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.62 E-value=5.2e-15 Score=147.74 Aligned_cols=146 Identities=12% Similarity=0.104 Sum_probs=117.4
Q ss_pred CCCEEEEEECCCCCEEEEEeC-CC-----cEEEEECCCCeEEEEEeCCCc------------------------CeEEEE
Q psy11015 180 RDGVWDVAVRPGQPVLGSASA-DR-----TVRLWSTQTGKCVLQYSGHSG------------------------SVNSVR 229 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~-Dg-----~v~iwd~~~~~~~~~~~~h~~------------------------~v~~i~ 229 (360)
...|.+++|+|+|+.|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 899999999988777765443 378999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 230 ~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
|+|||++|++++. +.|.+||+.++.. .....+..|...+..++|+|||++|+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~--------------------------~~~~~l~~~~~~~~~~~~SPDG~~la~ 168 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGK--------------------------AAVRQLTHGEGFATDAKLSPKGGFVSF 168 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCST--------------------------TSCCBCCCSSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCc--------------------------ceEEEcccCCcccccccCCCCCCEEEE
Confidence 9999999999887 8999999876510 023345567788999999999999999
Q ss_pred EECCCcEEEEECCCCeEEEEEecCCCc----------------eEEEEEcCCCCEEEccc
Q psy11015 310 ASWDRVANLFDVETGTILQSLTEPGEA----------------IRAAAGRTGGPIRASPL 353 (360)
Q Consensus 310 gs~dg~i~iwd~~~~~~~~~l~~h~~~----------------v~~~~~~~~g~~las~~ 353 (360)
++ ++.|++||+.+++.......+... +.+++|+|+|++|+++.
T Consensus 169 ~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 169 IR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred Ee-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 88 469999999998876554444332 47799999999887764
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.62 E-value=1.8e-15 Score=150.62 Aligned_cols=170 Identities=12% Similarity=0.017 Sum_probs=123.2
Q ss_pred eecCccceeeeeeeecCCC---CEEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEe---CCCcCeEE
Q psy11015 163 FKTSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYS---GHSGSVNS 227 (360)
Q Consensus 163 ~~~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~~~~~~~~~---~h~~~v~~ 227 (360)
+.++..++.....+.+|.. .|.+++|+|||++|++++.+ +.+.+||+.+++. ..+. +|...+.+
T Consensus 40 ~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~ 118 (723)
T 1xfd_A 40 RLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQY 118 (723)
T ss_dssp EEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSB
T ss_pred EEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccc
Confidence 4455566666777777765 49999999999999999875 7788999998875 3333 34445889
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---------CcEEEE
Q psy11015 228 VRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---------NVVIAA 298 (360)
Q Consensus 228 i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~i 298 (360)
++|+|||+.|+.++. +.|++||+.++.......... .-..+.++. +.+.++
T Consensus 119 ~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-------------------~~~~~~g~~~~v~~ee~~~~~~~~ 178 (723)
T 1xfd_A 119 AGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-------------------EGVIYNGLSDWLYEEEILKTHIAH 178 (723)
T ss_dssp CCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-------------------TTTEEEEECCHHHHHTTSSSSEEE
T ss_pred cEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-------------------CCceECcccceeEEEEeccCcceE
Confidence 999999999998886 789999988763322110000 000011111 134789
Q ss_pred EEcCCCCEEEEEECCC----------------------------------cEEEEECCCCeEEEEEecC------CCceE
Q psy11015 299 DWLSDGEQVITASWDR----------------------------------VANLFDVETGTILQSLTEP------GEAIR 338 (360)
Q Consensus 299 ~~sp~g~~l~tgs~dg----------------------------------~i~iwd~~~~~~~~~l~~h------~~~v~ 338 (360)
+|+|||++|++++.|+ .|++||+.+++....+..+ ...+.
T Consensus 179 ~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~ 258 (723)
T 1xfd_A 179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYIT 258 (723)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEE
T ss_pred EECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeE
Confidence 9999999999887653 7999999988866666654 56889
Q ss_pred EEEEcCCCCEEEccc
Q psy11015 339 AAAGRTGGPIRASPL 353 (360)
Q Consensus 339 ~~~~~~~g~~las~~ 353 (360)
+++|+|+|+++++..
T Consensus 259 ~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 259 MVKWATSTKVAVTWL 273 (723)
T ss_dssp EEEESSSSEEEEEEE
T ss_pred EEEEeCCCeEEEEEE
Confidence 999999999887653
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=1.3e-13 Score=124.60 Aligned_cols=157 Identities=8% Similarity=-0.007 Sum_probs=123.5
Q ss_pred CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----CCcCeEEEEEeeCCCEEEEEe
Q psy11015 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSAS 241 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~----h~~~v~~i~~~p~~~~l~s~s 241 (360)
+..++..+..+..+...+.+++|+|+++.+++++.++.|.+||..+++.+..+.. +...+.+++|+|+++.++.++
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 3356677777776666789999999999999999999999999999998887764 556788999999999776665
Q ss_pred C-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy11015 242 G-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLF 319 (360)
Q Consensus 242 ~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iw 319 (360)
. ++.|.+||+.++... ..+.... ...++|+|+|+++++++ .++.|.+|
T Consensus 250 ~~~~~v~~~d~~~~~~~----------------------------~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNIL----------------------------AKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp SSSSEEEEEETTTCCEE----------------------------EEEECSS--CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEECCCCcEE----------------------------EEEEcCC--CceEEECCCCCEEEEEECCCCeEEEE
Confidence 4 589999999876332 2222222 24689999999776655 68999999
Q ss_pred ECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 320 DVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 320 d~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
|..+++.+..+..+ ..+.+++|+|+|++++.+.
T Consensus 300 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 300 DAKSYKVVKTFDTP-THPNSLALSADGKTLYVSV 332 (353)
T ss_dssp ETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEE
T ss_pred ECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEE
Confidence 99999998888754 4689999999998555443
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=6.6e-14 Score=134.84 Aligned_cols=175 Identities=9% Similarity=-0.043 Sum_probs=127.6
Q ss_pred cCCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEEEeCCCcCeEEEEEee
Q psy11015 155 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~--~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
.....+.+| +..+++++.++..+.. +.+++|+|++++|++++.|++|++||+ .+++++..+. +...+..++|+|
T Consensus 156 ~~d~~V~v~--D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp 231 (543)
T 1nir_A 156 RDAGQIALV--DGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSK 231 (543)
T ss_dssp GGGTEEEEE--ETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECC
T ss_pred cCCCeEEEE--ECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCC
Confidence 334445455 4456778888884333 899999999999999999999999999 8899999988 456689999999
Q ss_pred ----CCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCE
Q psy11015 233 ----NKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQ 306 (360)
Q Consensus 233 ----~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~ 306 (360)
+|+++++++ .+++|.+||..++.....+.... .......-| ...+.++.++|++..
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g------------------~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG------------------MTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE------------------ECSSSCCEESCCCEEEEEECSSSSE
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccC------------------cccCccccccCCceEEEEECCCCCE
Confidence 999998888 48999999988764432210000 000000002 237899999997765
Q ss_pred -EEEEECCCcEEEEECCCCeEEE--EEecCCCceEEEEEcCCCCEEEcc
Q psy11015 307 -VITASWDRVANLFDVETGTILQ--SLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 307 -l~tgs~dg~i~iwd~~~~~~~~--~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
+++...+|.|.+||+.+++.+. .+. +...+.+++|+|+|+++.++
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEE
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEE
Confidence 5667788999999998765443 443 56678899999999965543
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.60 E-value=8.6e-14 Score=125.09 Aligned_cols=168 Identities=13% Similarity=0.062 Sum_probs=119.7
Q ss_pred cCCeEEEeeecCc-cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-CcEEEEECC--CCe--EEEEEeCCCcCeEEE
Q psy11015 155 QTSKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQ--TGK--CVLQYSGHSGSVNSV 228 (360)
Q Consensus 155 ~~~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-g~v~iwd~~--~~~--~~~~~~~h~~~v~~i 228 (360)
..+..+..|.... .....+.. ..|...+.+++|+|++++|++++.+ +.|.+|++. ++. .+..+..+. .+.++
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 89 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHI 89 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEE
T ss_pred CCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEE
Confidence 3445556665532 22233433 3577789999999999988888887 999999997 554 445565444 78999
Q ss_pred EEeeCCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE
Q psy11015 229 RFLPNKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV 307 (360)
Q Consensus 229 ~~~p~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l 307 (360)
+|+|+|+++++++. ++.|.+||+..+.. ......+..+ ..+.+++|+|+|+++
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-------------------------~~~~~~~~~~-~~~~~~~~s~dg~~l 143 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLP-------------------------VGVVDVVEGL-DGCHSANISPDNRTL 143 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEE-------------------------EEEEEEECCC-TTBCCCEECTTSSEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCcc-------------------------ccccccccCC-CCceEEEECCCCCEE
Confidence 99999998876665 88999999853211 1123333333 458889999999998
Q ss_pred EEEE-CCCcEEEEECCC-CeEEE----EEec-CCCceEEEEEcCCCCEEE
Q psy11015 308 ITAS-WDRVANLFDVET-GTILQ----SLTE-PGEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 308 ~tgs-~dg~i~iwd~~~-~~~~~----~l~~-h~~~v~~~~~~~~g~~la 350 (360)
++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|+|.+++
T Consensus 144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred EEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 8887 899999999987 65432 2333 345788999999998554
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.59 E-value=1.3e-13 Score=124.61 Aligned_cols=161 Identities=7% Similarity=-0.012 Sum_probs=124.4
Q ss_pred eecCccceeeeeeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcC---------eEEEEEee
Q psy11015 163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGS---------VNSVRFLP 232 (360)
Q Consensus 163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~---------v~~i~~~p 232 (360)
+.++..+++.+..+... ..+.+++|+|+++. ++++..++.|.+||..+++.+..+..+.+. +.+++|+|
T Consensus 72 ~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 150 (353)
T 3vgz_A 72 YRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD 150 (353)
T ss_dssp EEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred EEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC
Confidence 33444556666666543 34778999999984 555566899999999999988888765432 78999999
Q ss_pred CCCEEEEEe--CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE
Q psy11015 233 NKDLVLSAS--GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 310 (360)
Q Consensus 233 ~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg 310 (360)
+|+.+++++ .++.|.+||+.++.. ...+..+...+.+++|+|+|++++++
T Consensus 151 dg~~l~~~~~~~~~~i~~~d~~~~~~----------------------------~~~~~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 151 ATNTVYISGIGKESVIWVVDGGNIKL----------------------------KTAIQNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp TTTEEEEEEESSSCEEEEEETTTTEE----------------------------EEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred CCCEEEEEecCCCceEEEEcCCCCce----------------------------EEEecCCCCccceEEECCCCCEEEEE
Confidence 999777765 478899999987632 33344344557789999999999999
Q ss_pred ECCCcEEEEECCCCeEEEEEec----CCCceEEEEEcCCCCEEEcc
Q psy11015 311 SWDRVANLFDVETGTILQSLTE----PGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 311 s~dg~i~iwd~~~~~~~~~l~~----h~~~v~~~~~~~~g~~las~ 352 (360)
+.++.|.+||..+++.+..+.. +...+.+++|+|+|..++.+
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 9999999999999998888764 45578899999999865544
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.59 E-value=3e-14 Score=147.81 Aligned_cols=151 Identities=9% Similarity=-0.010 Sum_probs=127.5
Q ss_pred eeeeecCCC-CEEEEEECCCCCEEEEEeCCCcEE-EEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 173 IRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR-LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 173 ~~~l~~h~~-~V~~l~~~~~~~~l~sgs~Dg~v~-iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
...+..|.+ .+.+++|+ ++..|++++.++.+. +|++.++.... +.+|...+.+++|+|+|++|++++.++.|++||
T Consensus 329 ~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 329 VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 344677888 89999999 999999999988898 99998776544 447888999999999999999999999999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC----------cEEEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----------VANLFD 320 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg----------~i~iwd 320 (360)
+.++. ....+.+|...+.+++|+|+|++|++++.++ .|++||
T Consensus 407 ~~tg~----------------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 407 LETGK----------------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp TTTCC----------------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred CCCCc----------------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 98762 2333447888899999999999998887654 899999
Q ss_pred CCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 321 VETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 321 ~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
+.+++ +..+..|...+.+++|+|+|+.++.++.
T Consensus 459 ~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 459 MEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 99887 6778888888999999999998776654
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.57 E-value=2.6e-13 Score=121.71 Aligned_cols=158 Identities=9% Similarity=0.083 Sum_probs=117.1
Q ss_pred cceee-eeeeecCCCCEEEEEECCCCCEEEEEeCCC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeC
Q psy11015 168 LSCYK-IRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASG 242 (360)
Q Consensus 168 ~~~~~-~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~ 242 (360)
.++.. ...+..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. ...+.+++|+|+|++++ ++..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 70 QLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEET
T ss_pred CCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecC
Confidence 34444 667777777777799999999888555553 899999999998888874 45579999999998554 5566
Q ss_pred CCc-EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEE
Q psy11015 243 DKS-VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFD 320 (360)
Q Consensus 243 d~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd 320 (360)
++. +.+|++........ .. .........+..++|+|+|++++.++ .++.|.+||
T Consensus 149 ~~~~i~~~~~~~~g~~~~-----------------------~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 204 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFD-----------------------TG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILE 204 (331)
T ss_dssp TTTEEEEEEECTTCCEEE-----------------------EE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEECCCCcEee-----------------------cC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 688 99999875422111 00 11223445678999999999765554 689999999
Q ss_pred CCCCeE---EEEEecCCCceEEEEEcCCCCEEEc
Q psy11015 321 VETGTI---LQSLTEPGEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 321 ~~~~~~---~~~l~~h~~~v~~~~~~~~g~~las 351 (360)
+.+++. +..+..+ ..+.+++|+|+|++++.
T Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 205 TQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp CSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEE
T ss_pred CCCCcccceeeeccCC-CCCceEEECCCCCEEEE
Confidence 999887 7777644 56789999999995543
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.56 E-value=2.2e-15 Score=149.99 Aligned_cols=145 Identities=12% Similarity=0.046 Sum_probs=115.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc---CeEEEEEeeCCCEEEEEeCC---------CcEEEE
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASGD---------KSVHIW 249 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~---~v~~i~~~p~~~~l~s~s~d---------~~i~vw 249 (360)
.+.+++|+|+|.++++ +.||+|++||+.+++....+.+|.. .|.+++|+|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999997766 7899999999999998888887765 49999999999999999875 678899
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 329 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~ 329 (360)
|+.++... .+....+|...+..++|+|||++|+.++. +.|++||+.+++....
T Consensus 97 d~~~~~~~--------------------------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 97 KIPHGDPQ--------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp ESSSCCCE--------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEE
T ss_pred ECCCCceE--------------------------eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEE
Confidence 99876321 12222345556888999999999999986 8999999999887666
Q ss_pred EecCCCce------------------EEEEEcCCCCEEEcccc
Q psy11015 330 LTEPGEAI------------------RAAAGRTGGPIRASPLL 354 (360)
Q Consensus 330 l~~h~~~v------------------~~~~~~~~g~~las~~~ 354 (360)
...+...+ .+++|+|+|+.|+++..
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 65544433 78999999998887763
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.56 E-value=2.5e-13 Score=122.97 Aligned_cols=169 Identities=11% Similarity=0.042 Sum_probs=116.2
Q ss_pred CeEEEeeecCccceeeee-eeecCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCe--EEEEEeCCCcCeEEEEE
Q psy11015 157 SKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGK--CVLQYSGHSGSVNSVRF 230 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~ 230 (360)
+.-+.+|.++..++.... ....+...+..++|+|+++ |++++. ++.|.+|++.++. .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 344555666555544432 3345567788899999998 555544 6899999998775 45555557778899999
Q ss_pred eeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee---------CCCCcEEEEEE
Q psy11015 231 LPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL---------GHSNVVIAADW 300 (360)
Q Consensus 231 ~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~i~~ 300 (360)
+|+|+++++++ .++++.+|++....... .+..+. .+...+.+++|
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~-------------------------~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALT-------------------------LTDTVQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEE-------------------------EEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCee-------------------------ecceeecCCCCCCccccCCCceEEEE
Confidence 99999888887 68999999986321110 111111 12345889999
Q ss_pred cCCCCEEEEEECCCcEEEEECC-CCeEE--EEEec-CCCceEEEEEcCCCCEEEc
Q psy11015 301 LSDGEQVITASWDRVANLFDVE-TGTIL--QSLTE-PGEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 301 sp~g~~l~tgs~dg~i~iwd~~-~~~~~--~~l~~-h~~~v~~~~~~~~g~~las 351 (360)
+|+|+.++++..++.|.+|++. ++... ..+.. ....+..++|+|+|++++.
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 9999966666678899999998 56433 22333 2346788999999995544
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=2.6e-13 Score=121.72 Aligned_cols=163 Identities=15% Similarity=0.119 Sum_probs=116.5
Q ss_pred CCeEEEeeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeC
Q psy11015 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPN 233 (360)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~ 233 (360)
.+..+..|.. .+++.+..+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..+++|+|+
T Consensus 18 ~~~~v~~~d~--~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d 94 (331)
T 3u4y_A 18 HLRRISFFST--DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD 94 (331)
T ss_dssp GGTEEEEEET--TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT
T ss_pred CCCeEEEEeC--cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC
Confidence 3444545544 3456666666666677 9999999996666655 89999999999987 7777767666666999999
Q ss_pred CCEEEEEeCCC---cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE-
Q psy11015 234 KDLVLSASGDK---SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT- 309 (360)
Q Consensus 234 ~~~l~s~s~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t- 309 (360)
|++++++..++ .|.+||+.++.. +..+.. ...+.+++|+|+|+++++
T Consensus 95 g~~l~~~~~~~~~~~i~v~d~~~~~~----------------------------~~~~~~-~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 95 DQFAVTVTGLNHPFNMQSYSFLKNKF----------------------------ISTIPI-PYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp SSEEEECCCSSSSCEEEEEETTTTEE----------------------------EEEEEC-CTTEEEEEECTTSSCEEEE
T ss_pred CCEEEEecCCCCcccEEEEECCCCCe----------------------------EEEEEC-CCCccceEECCCCCEEEEE
Confidence 99998555553 899999987632 233333 345689999999986654
Q ss_pred EECCCc-EEEEECCCCeEE----EEEecCCCceEEEEEcCCCCEEE
Q psy11015 310 ASWDRV-ANLFDVETGTIL----QSLTEPGEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 310 gs~dg~-i~iwd~~~~~~~----~~l~~h~~~v~~~~~~~~g~~la 350 (360)
+..++. +.+|++.....+ .....+.....+++|+|+|++++
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEE
T ss_pred ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEE
Confidence 456688 999998753322 12223455689999999998443
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.56 E-value=2e-14 Score=143.47 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=111.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV 259 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~--~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~ 259 (360)
.|.+++|+|+|+.|++++. +.|++||+.++. .+..+..|...+.+++|+|||++|+.++ ++.|.+||+.++.....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3889999999999999887 899999999873 3455677888999999999999999887 46899999987743321
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEeeCC--------CCcEEEEEEcCCCCEEEEEECCC-----------------
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKELLGH--------SNVVIAADWLSDGEQVITASWDR----------------- 314 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~~v~~i~~sp~g~~l~tgs~dg----------------- 314 (360)
..... .....++ ...+.+++|+|||++|++++.|+
T Consensus 188 ~~~~~--------------------~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 188 TADGS--------------------TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp CCCCC--------------------SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred ccCCc--------------------cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 10000 0000011 11247799999999999988776
Q ss_pred ----------------cEEEEECCC-CeEEEEEe--cCCCceEEEEEcCCCCEEEccc
Q psy11015 315 ----------------VANLFDVET-GTILQSLT--EPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 315 ----------------~i~iwd~~~-~~~~~~l~--~h~~~v~~~~~~~~g~~las~~ 353 (360)
.|.+||+.+ ++...... .|...+.+++| |+|++++.+.
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 789999988 87554433 37788999999 9999888543
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.55 E-value=1.4e-12 Score=116.70 Aligned_cols=187 Identities=9% Similarity=0.068 Sum_probs=127.8
Q ss_pred EEEeeecCccceeeeeeeec-C----CCCEEEEEECCCCCEEEEEe------------CCCcEEEEECCCCeEEEEEeCC
Q psy11015 159 IVSSFKTSLLSCYKIRSFSG-H----RDGVWDVAVRPGQPVLGSAS------------ADRTVRLWSTQTGKCVLQYSGH 221 (360)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~-h----~~~V~~l~~~~~~~~l~sgs------------~Dg~v~iwd~~~~~~~~~~~~h 221 (360)
.+..|.. .++..+..+.. + ...+.+++|+|+++.+++++ .++.|.+||+.+++.+..+..
T Consensus 57 ~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 133 (337)
T 1pby_B 57 SLVKIDL--VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp EEEEEET--TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred eEEEEEC--CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence 3444443 34455555542 2 23677899999999888886 679999999999988888774
Q ss_pred CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCC-CCCCCC-C------CCCC-Cc--------------
Q psy11015 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND-SDLDES-K------EPDE-SS-------------- 278 (360)
Q Consensus 222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~-~------~~~~-~~-------------- 278 (360)
...+.+++|+|+|++++++ ++.|.+||+.++........... ...... . .... ..
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP 211 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccc
Confidence 4567899999999988877 68899999998876654433321 111000 0 0000 00
Q ss_pred --------------cccccc-eeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015 279 --------------ITLRTP-VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR 343 (360)
Q Consensus 279 --------------~~~~~~-~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~ 343 (360)
...... ...+..+...+.+++|+|+|++++++ ++.|.+||+.+++.+..+..+ ..+.+++|+
T Consensus 212 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s 288 (337)
T 1pby_B 212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVS 288 (337)
T ss_dssp TSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEEC
T ss_pred ccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEEC
Confidence 000000 11233455567889999999999988 799999999999988887644 467899999
Q ss_pred CCCCEEEccc
Q psy11015 344 TGGPIRASPL 353 (360)
Q Consensus 344 ~~g~~las~~ 353 (360)
|+|++++++.
T Consensus 289 ~dg~~l~~~~ 298 (337)
T 1pby_B 289 TDGSTVWLGG 298 (337)
T ss_dssp TTSCEEEEES
T ss_pred CCCCEEEEEc
Confidence 9998666543
No 146
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.55 E-value=1.8e-13 Score=131.77 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=112.3
Q ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc--ccCeeEeeeCCCC
Q psy11015 187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA--VINWECLVSNNDN 264 (360)
Q Consensus 187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~--~~~~~~~~~~~~~ 264 (360)
+++|++.++++++.|++|.+||..+++++..+..+.. +..++|+|+|+++++++.|++|.+||+ .++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---------- 212 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---------- 212 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC----------
Confidence 3788888999999999999999999999999984333 899999999999999999999999999 554
Q ss_pred CCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC----CCCEEEEEE-CCCcEEEEECCCCeEEEEEecC------
Q psy11015 265 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS----DGEQVITAS-WDRVANLFDVETGTILQSLTEP------ 333 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp----~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h------ 333 (360)
..+.++. +...+.+++|+| +|+++++++ .+++|.+||..+++++.++..+
T Consensus 213 ------------------~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 213 ------------------TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp ------------------EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred ------------------cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 2344454 345689999999 999999888 4899999999999999988652
Q ss_pred -----CCceEEEEEcCCCCEEE
Q psy11015 334 -----GEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 334 -----~~~v~~~~~~~~g~~la 350 (360)
...+.+++++|++..++
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEE
T ss_pred cccccCCceEEEEECCCCCEEE
Confidence 23788999999776443
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.54 E-value=8.6e-13 Score=118.49 Aligned_cols=165 Identities=8% Similarity=0.008 Sum_probs=115.7
Q ss_pred eEEEeeecC--ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECC---CCeEEEEEeCCCcCeEEEEEe
Q psy11015 158 KIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ---TGKCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 158 ~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~---~~~~~~~~~~h~~~v~~i~~~ 231 (360)
..+..|... ......+..+..+. .+.+++|+|+++.|++++. ++.|.+||+. .+..+..+..+ ..+.+++|+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s 137 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANIS 137 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEEC
T ss_pred CeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEEC
Confidence 556666655 33445566666655 8899999999997766654 8899999994 44555555543 468899999
Q ss_pred eCCCEEEEEe-CCCcEEEEEccc-CeeEeeeCCCCCCCCCCCCCCCCCcccccccee--EeeC-CCCcEEEEEEcCCCCE
Q psy11015 232 PNKDLVLSAS-GDKSVHIWQAVI-NWECLVSNNDNDSDLDESKEPDESSITLRTPVK--ELLG-HSNVVIAADWLSDGEQ 306 (360)
Q Consensus 232 p~~~~l~s~s-~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-h~~~v~~i~~sp~g~~ 306 (360)
|+|+++++++ .++.|.+||+.+ +... ... .+.. ....+.+++|+|+|++
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDDGHLV--------------------------AQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEE--------------------------EEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCEEEEecCCCCEEEEEEecCCCcee--------------------------eecccccccCCCCCcceEEECCCCCE
Confidence 9999888877 899999999976 4211 111 2222 3347889999999998
Q ss_pred EEEEE-CCCcEEEEECC--CCeE--EEEEec---C---CCceEEEEEcCCCCEEE
Q psy11015 307 VITAS-WDRVANLFDVE--TGTI--LQSLTE---P---GEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 307 l~tgs-~dg~i~iwd~~--~~~~--~~~l~~---h---~~~v~~~~~~~~g~~la 350 (360)
+++++ .++.+.+||+. ++.. ...+.. . ...+.+++|+|+|.+++
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 76555 78999999995 3432 333321 1 23567899999998665
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=5e-12 Score=114.32 Aligned_cols=146 Identities=10% Similarity=0.045 Sum_probs=106.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEE--EEEeCCC-cCeEEEEEeeCCCEEEE-EeCCCcEEEEEccc--C
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCV--LQYSGHS-GSVNSVRFLPNKDLVLS-ASGDKSVHIWQAVI--N 254 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-~~~~~--~~~~~h~-~~v~~i~~~p~~~~l~s-~s~d~~i~vwd~~~--~ 254 (360)
.+.+++|+|++++++++..++.|++|++. ++... ..+..+. ..+..++|+|+|+++++ +..++.+.+|++.. +
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 48899999999977777778999999998 55432 2233332 36789999999996555 56788999999874 3
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC------CCcEEEEEEcCCCCEE-EEEECCCcEEEEECC---CC
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH------SNVVIAADWLSDGEQV-ITASWDRVANLFDVE---TG 324 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~i~~sp~g~~l-~tgs~dg~i~iwd~~---~~ 324 (360)
... ....+... ...+..++|+|+|++| +++..++.|.+|++. +.
T Consensus 222 ~~~--------------------------~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 222 AFT--------------------------QLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp EEE--------------------------EEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred ceE--------------------------EeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 211 11222221 1458899999999987 556678999999987 33
Q ss_pred eEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 325 TILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 325 ~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
..+..+..+...+.+++|+|+|++++.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 276 TLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred EEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 56667777777789999999999776554
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.52 E-value=8e-14 Score=135.43 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=111.2
Q ss_pred EEEEECCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccCeeE
Q psy11015 184 WDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWEC 257 (360)
Q Consensus 184 ~~l~~~~~~~~l~sgs~D----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~~~~ 257 (360)
++++|+|||+.|++++.| +.|++||+.+++.. .+.+|.+.+.+++|+|||+.|+++..++ .|.+||+.++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~- 230 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV- 230 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence 789999999999988887 78999999988754 6778889999999999999999888888 899999887622
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE--------EcCCCCEEEEEECCCcEEEEECCCCeEEEE
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--------WLSDGEQVITASWDRVANLFDVETGTILQS 329 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--------~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~ 329 (360)
. .+.+|...+..++ |+|||..+++++.||++++|++ |+...
T Consensus 231 ---------------------------~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~- 279 (582)
T 3o4h_A 231 ---------------------------E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE- 279 (582)
T ss_dssp ---------------------------E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-
T ss_pred ---------------------------E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-
Confidence 2 3445555555555 9999988899999999999999 76554
Q ss_pred EecCCCceEEEEEcCCCCEEEcccc
Q psy11015 330 LTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 330 l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.+.+.+.+++|+ +|.++++++.
T Consensus 280 --~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 280 --APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp --CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred --cCCCceEEEEec-CCEEEEEEcC
Confidence 345778999999 8988876553
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=7.2e-15 Score=146.35 Aligned_cols=168 Identities=11% Similarity=0.062 Sum_probs=118.5
Q ss_pred cCccceeeeeeeecCCC---CEEEEEECCCCCEEEEEeC---------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEee
Q psy11015 165 TSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232 (360)
Q Consensus 165 ~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~sgs~---------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p 232 (360)
++..++.....+.+|.. .|.+++|+|||+.|++++. |+.|++||+.+++.+.... ....+.+++|+|
T Consensus 41 ~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SP 119 (719)
T 1z68_A 41 YNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSP 119 (719)
T ss_dssp EESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECS
T ss_pred EEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECC
Confidence 33444555555655544 4899999999999998876 7899999999987621111 235688999999
Q ss_pred CCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcE---------EEEEEcCC
Q psy11015 233 NKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV---------IAADWLSD 303 (360)
Q Consensus 233 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------~~i~~sp~ 303 (360)
||+.|+.++ |+.|++||+.++........ ......+.||...| .+++|+||
T Consensus 120 DG~~la~~~-~~~i~~~~~~~g~~~~l~~~-------------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD 179 (719)
T 1z68_A 120 VGSKLAYVY-QNNIYLKQRPGDPPFQITFN-------------------GRENKIFNGIPDWVYEEEMLATKYALWWSPN 179 (719)
T ss_dssp STTCEEEEE-TTEEEEESSTTSCCEECCCC-------------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTT
T ss_pred CCCEEEEEE-CCeEEEEeCCCCCcEEEecC-------------------CCcCCeEcccccceeeeecccCcccEEECCC
Confidence 999999885 78999999987743321000 00111223443332 58999999
Q ss_pred CCEEEEEECCC----------------------------------cEEEEECCCCeEE---E-----EEecCCCceEEEE
Q psy11015 304 GEQVITASWDR----------------------------------VANLFDVETGTIL---Q-----SLTEPGEAIRAAA 341 (360)
Q Consensus 304 g~~l~tgs~dg----------------------------------~i~iwd~~~~~~~---~-----~l~~h~~~v~~~~ 341 (360)
|++|++++.|. .|++||+.+++.. . .+.+|...+..++
T Consensus 180 G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (719)
T 1z68_A 180 GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLT 259 (719)
T ss_dssp SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEE
T ss_pred CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeE
Confidence 99999988652 7889999987642 1 1335778899999
Q ss_pred EcCCCCEEEccc
Q psy11015 342 GRTGGPIRASPL 353 (360)
Q Consensus 342 ~~~~g~~las~~ 353 (360)
|+|+|.++++..
T Consensus 260 ~SpD~~~~~~~~ 271 (719)
T 1z68_A 260 WVTDERVCLQWL 271 (719)
T ss_dssp ESSSSEEEEEEE
T ss_pred EeCCCeEEEEEe
Confidence 999998887744
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.52 E-value=1.2e-13 Score=143.29 Aligned_cols=144 Identities=9% Similarity=-0.052 Sum_probs=123.1
Q ss_pred CCCCEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc-CeEEEEEeeCCCEEEEEeCCCcEE-EEEcccCe
Q psy11015 179 HRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVLSASGDKSVH-IWQAVINW 255 (360)
Q Consensus 179 h~~~V~~l~~~-~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~-~v~~i~~~p~~~~l~s~s~d~~i~-vwd~~~~~ 255 (360)
|.+.+.+++|+ |+|..|++++ ++.|.+|++..+... .+..|.+ .+.+++|+ +|+.++.++.+..+. +||+..+
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~- 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG- 369 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-
Confidence 45579999999 9999888888 889999999887654 4666777 89999999 999999998888888 8888755
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~ 335 (360)
....+.+|...+..++|+|+|++|++++.++.|++||+.+++....+..|..
T Consensus 370 ----------------------------~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 370 ----------------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 421 (1045)
T ss_dssp ----------------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred ----------------------------CceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence 2233447778899999999999999999999999999999998888878999
Q ss_pred ceEEEEEcCCCCEEEcccc
Q psy11015 336 AIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 336 ~v~~~~~~~~g~~las~~~ 354 (360)
.+.+++|+|+|++++++..
T Consensus 422 ~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEE
T ss_pred CccceEECCCCCeEEEEec
Confidence 9999999999998877653
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.52 E-value=7.9e-14 Score=135.47 Aligned_cols=139 Identities=13% Similarity=-0.007 Sum_probs=110.3
Q ss_pred EEEEEECCCCC--EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----CcEEEEEcccCee
Q psy11015 183 VWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWE 256 (360)
Q Consensus 183 V~~l~~~~~~~--~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~~~~~~ 256 (360)
+...+|+|+++ .+++++.|+ +.+||+.++++......+ . .+++|+|||+++++++.| +.|++||+.++
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g-- 185 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG-- 185 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC--
T ss_pred ceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC--
Confidence 33557777765 455555554 559999999876655533 3 789999999999988877 78999998876
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC--cEEEEECCCCeEEEEEecCC
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--VANLFDVETGTILQSLTEPG 334 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg--~i~iwd~~~~~~~~~l~~h~ 334 (360)
....+..|...+..++|+|||++|++++.+| .|++||+.+++.. .+..|.
T Consensus 186 ---------------------------~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 237 (582)
T 3o4h_A 186 ---------------------------GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS 237 (582)
T ss_dssp ---------------------------CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred ---------------------------CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence 3446778888999999999999999888898 8999999999887 777787
Q ss_pred CceEEEE--------EcCCCCEEEccccc
Q psy11015 335 EAIRAAA--------GRTGGPIRASPLLL 355 (360)
Q Consensus 335 ~~v~~~~--------~~~~g~~las~~~~ 355 (360)
..+..++ |+|+|.+++++...
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 7777777 99999888877643
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=1.4e-12 Score=118.64 Aligned_cols=148 Identities=10% Similarity=0.017 Sum_probs=104.9
Q ss_pred CEEEEEECCCCCEEEEEe-CCCcEEEEECCCCe-------E------EEEEeCCCcCeEEEEEeeCCCEEEEEe-CCCcE
Q psy11015 182 GVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGK-------C------VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSV 246 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~~-------~------~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d~~i 246 (360)
.+.+++|+|++++++.++ .++.|.+|++.... . ......+...+..++|+|+|+++++++ .++.|
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 458899999999665554 58899999887543 1 111223455688999999999887776 68999
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECC--
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVE-- 322 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~-- 322 (360)
.+||+.++..... ..+.....+...+..++|+|+|++|++++.+ +.|.+|++.
T Consensus 236 ~v~~~~~g~~~~~-----------------------~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 236 IAFRYADGMLDEI-----------------------QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp EEEEEETTEEEEE-----------------------EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred EEEEecCCceEEe-----------------------EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 9999986532111 0112222344557899999999999776654 899999985
Q ss_pred CCe--EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 323 TGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 323 ~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
++. .+..+.. ...+.+++|+|+|++++.+.
T Consensus 293 ~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 293 NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred CCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 454 4455554 56788999999999777654
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.51 E-value=1e-13 Score=137.73 Aligned_cols=154 Identities=10% Similarity=0.099 Sum_probs=115.3
Q ss_pred eeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeEEEEEeCCCcC--------------eEEEEEeeCC
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGS--------------VNSVRFLPNK 234 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~-----~~~~~~~~~h~~~--------------v~~i~~~p~~ 234 (360)
..+..|.+.+.+++|+|+|+.|+++ .|+.|++||+.+ ++.......+... +.++.|+|||
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 3455677789999999999999885 689999999998 8766554444433 4899999999
Q ss_pred CEEEEEe---------------------------------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc
Q psy11015 235 DLVLSAS---------------------------------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL 281 (360)
Q Consensus 235 ~~l~s~s---------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (360)
++|++++ .+..|.+||+.++....
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~----------------------- 249 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY----------------------- 249 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE-----------------------
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe-----------------------
Confidence 9999987 44678999987763221
Q ss_pred ccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----cEEEEECCCCeEEEEEe-c-CCC---ceEEEEEcC--CCCEE
Q psy11015 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQSLT-E-PGE---AIRAAAGRT--GGPIR 349 (360)
Q Consensus 282 ~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-----~i~iwd~~~~~~~~~l~-~-h~~---~v~~~~~~~--~g~~l 349 (360)
+.....|...+.+++|+|+|++|++++.++ .|.+||+.+++....+. . +.. .+.+++|+| +|.++
T Consensus 250 ---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l 326 (706)
T 2z3z_A 250 ---LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI 326 (706)
T ss_dssp ---CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE
T ss_pred ---eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEE
Confidence 111124677899999999999999988776 89999999994444332 2 222 246789999 99988
Q ss_pred Ecccc
Q psy11015 350 ASPLL 354 (360)
Q Consensus 350 as~~~ 354 (360)
+++..
T Consensus 327 ~~~~~ 331 (706)
T 2z3z_A 327 WQSRR 331 (706)
T ss_dssp EEECT
T ss_pred EEEcc
Confidence 87653
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.50 E-value=1.1e-12 Score=117.48 Aligned_cols=143 Identities=13% Similarity=0.137 Sum_probs=98.5
Q ss_pred CCeEEEeeecCccceeeeeeeec-CCC-CEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCC-----CcCeEE
Q psy11015 156 TSKIVSSFKTSLLSCYKIRSFSG-HRD-GVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNS 227 (360)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~-h~~-~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h-----~~~v~~ 227 (360)
....+..|.. .+++.+..+.. +.. .+.+++|+|+++.+ ++++.++.|.+||+.+++.+..+... ...+.+
T Consensus 9 ~~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (337)
T 1pby_B 9 RPDKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86 (337)
T ss_dssp TTTEEEEEET--TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred CCCeEEEEEC--CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence 3344444443 34555666653 322 47899999999755 56667899999999999888777632 126778
Q ss_pred EEEeeCCCEEEEEe------------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcE
Q psy11015 228 VRFLPNKDLVLSAS------------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV 295 (360)
Q Consensus 228 i~~~p~~~~l~s~s------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 295 (360)
++|+|+|+++++++ .++.|.+||+.++... ..+.. ...+
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~----------------------------~~~~~-~~~~ 137 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR----------------------------KAFEA-PRQI 137 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE----------------------------EEEEC-CSSC
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE----------------------------EEEeC-CCCc
Confidence 99999999888886 6799999999876332 22222 2345
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331 (360)
Q Consensus 296 ~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~ 331 (360)
.+++|+|+|++++++ ++.|.+||+.+++.+..+.
T Consensus 138 ~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 138 TMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp CCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC
T ss_pred ceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee
Confidence 667788888777666 5778888877776655543
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.48 E-value=6.7e-13 Score=131.80 Aligned_cols=143 Identities=14% Similarity=0.145 Sum_probs=111.2
Q ss_pred EEEEEECCCCCEEEEEe---------------------------------CCCcEEEEECCCCeEEEEEe--CCCcCeEE
Q psy11015 183 VWDVAVRPGQPVLGSAS---------------------------------ADRTVRLWSTQTGKCVLQYS--GHSGSVNS 227 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs---------------------------------~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~ 227 (360)
+.+++|+|+|+.|++++ .+..|++||+.+++...... .|...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 48899999999999988 44689999999987655442 46678999
Q ss_pred EEEeeCCCEEEEEeCCC-----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEE
Q psy11015 228 VRFLPNKDLVLSASGDK-----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAAD 299 (360)
Q Consensus 228 i~~~p~~~~l~s~s~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~ 299 (360)
++|+|+|+.|++++.++ .|.+||+.++..... +.. ..+. ..+.+++
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~-------------------------~~~-~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT-------------------------LFV-ETDKHYVEPLHPLT 316 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE-------------------------EEE-EECSSCCCCCSCCE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE-------------------------EEE-ccCCCeECccCCce
Confidence 99999999999888776 899999987622111 111 1111 1246789
Q ss_pred EcC--CCCEEEEEECCCcEEEEECC-CCeEEEEEecCCCceEE-EEEcCCCCEEEc
Q psy11015 300 WLS--DGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRA-AAGRTGGPIRAS 351 (360)
Q Consensus 300 ~sp--~g~~l~tgs~dg~i~iwd~~-~~~~~~~l~~h~~~v~~-~~~~~~g~~las 351 (360)
|+| +|+++++++.||.++||++. ++..+..+..|...+.+ ++|+|+|..++.
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEE
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEE
Confidence 999 99999999999999999876 67778888888888877 799999986643
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=136.04 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=106.3
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc---CeEEEEEeeCCCEEEEEeC---------CCcEEEEEcc
Q psy11015 185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASG---------DKSVHIWQAV 252 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~---~v~~i~~~p~~~~l~s~s~---------d~~i~vwd~~ 252 (360)
+++|+|++.+++ .+.|++|++||+.++++...+.+|.. .+.+++|+|||++|++++. +++|++||+.
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 678999995554 55699999999999998877775544 3899999999999998876 7899999998
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE-e
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-T 331 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~ 331 (360)
++.... ...+ ...+..++|||||++|+.++ |+.|++||+.+++..... .
T Consensus 99 ~g~~~~--------------------------~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~ 148 (719)
T 1z68_A 99 NGEFVR--------------------------GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN 148 (719)
T ss_dssp TTEECC--------------------------SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC
T ss_pred CCcccc--------------------------ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC
Confidence 773210 0111 24578899999999999886 789999999988765432 2
Q ss_pred cCCCce-----------------EEEEEcCCCCEEEcccc
Q psy11015 332 EPGEAI-----------------RAAAGRTGGPIRASPLL 354 (360)
Q Consensus 332 ~h~~~v-----------------~~~~~~~~g~~las~~~ 354 (360)
++...| .+++|+|||+.||++..
T Consensus 149 ~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 149 GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 232222 48999999999987663
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=5.1e-13 Score=133.59 Aligned_cols=140 Identities=11% Similarity=0.060 Sum_probs=109.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-----eEEEEEeeCCCEEEEEeCC---------CcEE
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----VNSVRFLPNKDLVLSASGD---------KSVH 247 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~-----v~~i~~~p~~~~l~s~s~d---------~~i~ 247 (360)
...+++|+|++.+++++ |++|++||+.++++...+.+|... ..++.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45688999999888886 999999999999988888877643 2447899999999998876 4567
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||+.++. ...+..|...+..++|||||+.||.++ |+.|++||+.++...
T Consensus 96 ~~d~~~~~-----------------------------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 96 IYDLNKRQ-----------------------------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEETTTTE-----------------------------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred EEECCCCc-----------------------------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 99998772 333556777899999999999998885 689999999888754
Q ss_pred EE-EecCCCce-----------------EEEEEcCCCCEEEccc
Q psy11015 328 QS-LTEPGEAI-----------------RAAAGRTGGPIRASPL 353 (360)
Q Consensus 328 ~~-l~~h~~~v-----------------~~~~~~~~g~~las~~ 353 (360)
+. ..++...+ .+++|+|||+.||...
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 32 12232222 3589999999888764
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=5.3e-12 Score=113.65 Aligned_cols=145 Identities=16% Similarity=0.086 Sum_probs=104.0
Q ss_pred CeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCC------cCeEEE
Q psy11015 157 SKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS------GSVNSV 228 (360)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l-~sgs~Dg~v~iwd~~~~~~~~~~~~h~------~~v~~i 228 (360)
...+..|.. .+++.+..+..+. ..+..++|+|+++.+ ++++.++.|.+||+.+++.+..+..+. ..+.++
T Consensus 20 ~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 20 PNNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp TTEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred CCeEEEEEC--CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence 344444443 4456666666543 257899999999855 566678999999999999888776332 237899
Q ss_pred EEeeCCCEEEEEeCC------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015 229 RFLPNKDLVLSASGD------------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI 296 (360)
Q Consensus 229 ~~~p~~~~l~s~s~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 296 (360)
+|+|+|+++++++.+ +.|.+||+.++... ..+..+. +...+.
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-------------------------~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-------------------------KPVRTFP-MPRQVY 151 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------------------CCSEEEE-CCSSCC
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-------------------------ceeeecc-CCCccc
Confidence 999999999988865 89999999865211 1223333 334688
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 297 ~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
+++|+|+|+ +++++ +.|.+||..+++.+..+..
T Consensus 152 ~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 152 LMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp CEEECTTSC-EEEES--SSEEEECTTTCCEEEEECS
T ss_pred ceeECCCCc-EEEcc--CcEEEEeCCCCceeccccc
Confidence 899999999 65554 4499999999988777653
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=8.9e-13 Score=118.78 Aligned_cols=139 Identities=7% Similarity=0.057 Sum_probs=106.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015 185 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWECLVSNN 262 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~~~~~~~~ 262 (360)
.+++++++.++++++.+++|++||+.+++.+..+..+. ..+..++|+|+|+.+ +++..++.|.+||+.++....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~---- 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF---- 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE----
Confidence 45678888899999999999999999999888887543 257899999999865 455678999999998774332
Q ss_pred CCCCCCCCCCCCCCCccccccceeEee-CC-----CCcEEEEEEcCCCCEEEEEECC------------CcEEEEECCCC
Q psy11015 263 DNDSDLDESKEPDESSITLRTPVKELL-GH-----SNVVIAADWLSDGEQVITASWD------------RVANLFDVETG 324 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h-----~~~v~~i~~sp~g~~l~tgs~d------------g~i~iwd~~~~ 324 (360)
.+. ++ ...+.+++|+|+|+++++++.+ +.|.+||+.++
T Consensus 80 ------------------------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 80 ------------------------HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp ------------------------EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred ------------------------EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 222 11 2236789999999999998865 89999999884
Q ss_pred e---EEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015 325 T---ILQSLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 325 ~---~~~~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
+ .+..+..+ ..+.+++|+|+|.+++++
T Consensus 136 ~~~~~~~~~~~~-~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 136 LEAKPVRTFPMP-RQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp GGBCCSEEEECC-SSCCCEEECTTSCEEEES
T ss_pred cccceeeeccCC-CcccceeECCCCcEEEcc
Confidence 3 34445443 468899999999966543
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=4.4e-11 Score=105.02 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=120.3
Q ss_pred ceeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015 169 SCYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKS 245 (360)
Q Consensus 169 ~~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~ 245 (360)
.+..+..+. ++...+.+++++|++.++++.+.++.|.+||.. ++.+..+. ++...+.+++++|+|+++++.+.++.
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 344555553 345678999999999988888889999999964 66666664 34567899999999998888888999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCC-cEEEEECC
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDR-VANLFDVE 322 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg-~i~iwd~~ 322 (360)
|.+||.... .+..+. ++...+.+++++|+|+++++...++ .|.+||.
T Consensus 187 i~~~~~~g~-----------------------------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~- 236 (286)
T 1q7f_A 187 VKVFNYEGQ-----------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ- 236 (286)
T ss_dssp EEEEETTCC-----------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred EEEEcCCCC-----------------------------EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence 999997432 122232 2235788999999999888887776 9999995
Q ss_pred CCeEEEEEecCCC--ceEEEEEcCCCCEEEcccccchh
Q psy11015 323 TGTILQSLTEPGE--AIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 323 ~~~~~~~l~~h~~--~v~~~~~~~~g~~las~~~~~ir 358 (360)
+++.+..+..+.. .+.+++++|+|.++++..+..|+
T Consensus 237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~ 274 (286)
T 1q7f_A 237 DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLY 274 (286)
T ss_dssp TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEE
T ss_pred CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEE
Confidence 5777777765433 47899999999988887666553
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=5.3e-12 Score=115.34 Aligned_cols=149 Identities=11% Similarity=0.015 Sum_probs=106.9
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeC-CCcCeEEEEEeeCCCE--EEEEe-------------
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSG-HSGSVNSVRFLPNKDL--VLSAS------------- 241 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~-~~~~~~~~~~-h~~~v~~i~~~p~~~~--l~s~s------------- 241 (360)
+...+..++|+|++++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44568899999999999999988 99999997 7876544321 1133567899999994 45553
Q ss_pred CCCcEEEEEccc-CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC-CCcEEE
Q psy11015 242 GDKSVHIWQAVI-NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW-DRVANL 318 (360)
Q Consensus 242 ~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~-dg~i~i 318 (360)
.++++.+|++.. +.... .+..+. .+...+.+++|+|+|+++++++. ++.|++
T Consensus 117 ~~g~v~v~~~~~~g~~~~-------------------------~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~ 171 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEK-------------------------NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT 171 (365)
T ss_dssp SCCEEEEEEECTTCCEEE-------------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCceEEEEccCCCCcCcc-------------------------eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence 689999999863 31110 111111 24567899999999999887764 689999
Q ss_pred EECC-CCeEE--EEEe--cCCCceEEEEEcCCCCEEEccc
Q psy11015 319 FDVE-TGTIL--QSLT--EPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 319 wd~~-~~~~~--~~l~--~h~~~v~~~~~~~~g~~las~~ 353 (360)
||+. +++.. ..+. .|...+..++|+|+|++++.+.
T Consensus 172 ~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence 9998 77653 3343 2456799999999998776543
No 163
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=1e-11 Score=113.49 Aligned_cols=135 Identities=9% Similarity=-0.055 Sum_probs=110.3
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
.+.+ |+.|+| ++..|+++ .++.|++||+.+.........|...+.++.+.+. .+++++.||.+.+||+..+..
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~- 158 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST- 158 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc-
Confidence 4666 999999 88899998 8899999999877656666678888988887654 388899999999999986521
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE--EEEE-----
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL----- 330 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~--~~~l----- 330 (360)
. . +...|++++|+|+| ++.|..||++++|+...+.. ..++
T Consensus 159 ---------------------------~-~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 159 ---------------------------K-Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp ---------------------------E-E---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH
T ss_pred ---------------------------c-c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc
Confidence 1 1 34589999999999 77899999999999887775 5666
Q ss_pred -e---cCCCceEEEEEcCCCCEEEcc
Q psy11015 331 -T---EPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 331 -~---~h~~~v~~~~~~~~g~~las~ 352 (360)
. +|...|.++.|.+++.++++-
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEEE
Confidence 2 367899999999999998853
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=7e-11 Score=107.37 Aligned_cols=181 Identities=9% Similarity=0.018 Sum_probs=113.7
Q ss_pred cCCeEEEeeecCccce--eeeeeeecCCCCEEEEEECCCCCEEEEEeCC----CcEEEEECCC--Ce--EEEEEeCCCcC
Q psy11015 155 QTSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQT--GK--CVLQYSGHSGS 224 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D----g~v~iwd~~~--~~--~~~~~~~h~~~ 224 (360)
..+.-+..|..+..++ ..+..+ |...+..++|+|++++|++++.+ +.|.+|++.. +. .+.....+...
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 3344555565544444 334444 77788899999999999999886 7999998865 53 34444545667
Q ss_pred eEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCC
Q psy11015 225 VNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 303 (360)
Q Consensus 225 v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~ 303 (360)
+..+++ +++++++++ .++.+.+|++............ ... ..........+...+.+++|+|+
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-------~~~-------~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV-------IEF-------KGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE-------EEC-------CCCCSCTTTCSSCCEEEEEECTT
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee-------EEc-------cCCCCCccccCCCcceEEEECCC
Confidence 788888 788777766 6789999998754221100000 000 00000000112345788999999
Q ss_pred CCEEEEEE-CCCcEEEEECCCCe-------E------EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 304 GEQVITAS-WDRVANLFDVETGT-------I------LQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 304 g~~l~tgs-~dg~i~iwd~~~~~-------~------~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
|+++++++ .++.|.+|++.... . ......+...+.+++|+|+|++++.+.
T Consensus 166 g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 166 GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 99776665 47899999876433 1 111223456688999999998665443
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.37 E-value=1.3e-11 Score=113.24 Aligned_cols=157 Identities=11% Similarity=-0.044 Sum_probs=119.2
Q ss_pred cceeeeeeeecCCCCEEE-----EEECCCCCEEEEEeC-CC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE
Q psy11015 168 LSCYKIRSFSGHRDGVWD-----VAVRPGQPVLGSASA-DR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS 239 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~-----l~~~~~~~~l~sgs~-Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s 239 (360)
.++..+..+..|...... .+|+|+|+.|+.++. +| .|.+||+.+++......++...+..+.|+|+|+.|+.
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence 456667778888877766 889999998888887 66 4888999999887777767666667889999999999
Q ss_pred EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEE--EcCCCCEEEEE-------
Q psy11015 240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--WLSDGEQVITA------- 310 (360)
Q Consensus 240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--~sp~g~~l~tg------- 310 (360)
++.++.+.+||+.++... .....+...+.... ++|+|.+++..
T Consensus 98 ~~~~~~l~~~d~~~g~~~----------------------------~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEEN----------------------------VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp EETTTEEEEEETTTCCEE----------------------------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred EeCCCeEEEEECCCCcce----------------------------eeeechhhcccccceeECCCCCeeccccccCccc
Confidence 999999999999877332 22333444454444 48999988743
Q ss_pred ---------------ECCCcEEEEECCCCeEEEEEecCCCceEEEEEcC-CCCEEEccc
Q psy11015 311 ---------------SWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT-GGPIRASPL 353 (360)
Q Consensus 311 ---------------s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~-~g~~las~~ 353 (360)
+.++.|.+||+.+++.. .+..+...+..++|+| +|..++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEE
Confidence 24477999999998754 4445667799999999 998777544
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.37 E-value=6.4e-11 Score=108.08 Aligned_cols=146 Identities=10% Similarity=-0.009 Sum_probs=103.6
Q ss_pred CEEEEEECCCCCE--EEEEe-------------CCCcEEEEECC-CCeEEEEEe----CCCcCeEEEEEeeCCCEEEEEe
Q psy11015 182 GVWDVAVRPGQPV--LGSAS-------------ADRTVRLWSTQ-TGKCVLQYS----GHSGSVNSVRFLPNKDLVLSAS 241 (360)
Q Consensus 182 ~V~~l~~~~~~~~--l~sgs-------------~Dg~v~iwd~~-~~~~~~~~~----~h~~~v~~i~~~p~~~~l~s~s 241 (360)
.+.+++|+|+++. +++++ .+|++.+|++. .++....+. .+...+.+++|+|+|+++++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3566899999984 55553 68999999997 465544443 2456799999999999887765
Q ss_pred -CCCcEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEEC-CCcE
Q psy11015 242 -GDKSVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW-DRVA 316 (360)
Q Consensus 242 -~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~-dg~i 316 (360)
.++.|.+||+. ++... .+..+. .|...+.+++|+|+|+++++++. ++.+
T Consensus 164 ~~~~~v~~~~~~~~g~~~--------------------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 217 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVE--------------------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp TTTTEEEEEEECTTSCEE--------------------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCCEEEEEEECCCCCEE--------------------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE
Confidence 46899999987 55221 122232 24567899999999999988775 6899
Q ss_pred EEEECC--CCeEE---EEEec-------CCC------ceEEEE-EcCCCCEEEccc
Q psy11015 317 NLFDVE--TGTIL---QSLTE-------PGE------AIRAAA-GRTGGPIRASPL 353 (360)
Q Consensus 317 ~iwd~~--~~~~~---~~l~~-------h~~------~v~~~~-~~~~g~~las~~ 353 (360)
.+|++. +|+.. ..+.. |.. .+.+++ |+|+|++++++.
T Consensus 218 ~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 999765 56542 22321 121 488999 999999776543
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.36 E-value=2.1e-12 Score=129.19 Aligned_cols=166 Identities=8% Similarity=-0.028 Sum_probs=115.1
Q ss_pred CccceeeeeeeecCCCC-----EEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015 166 SLLSCYKIRSFSGHRDG-----VWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~-----V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~ 231 (360)
+..++.+...+.+|... ...++|+|||+.|+.++.+ +.+.+||+.++++. .+..|.+.+..++||
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~S 120 (740)
T 4a5s_A 42 NAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWS 120 (740)
T ss_dssp ETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEEC
T ss_pred ECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEEC
Confidence 33445556667777643 2447899999999999887 55679999999854 466678889999999
Q ss_pred eCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCC---------cEEEEEEcC
Q psy11015 232 PNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---------VVIAADWLS 302 (360)
Q Consensus 232 p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~i~~sp 302 (360)
|||+.|+.+ .|+.|.+|++.++........ ......+.++.. ...++.|||
T Consensus 121 PdG~~la~~-~~~~i~~~~~~~~~~~~lt~~-------------------g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp 180 (740)
T 4a5s_A 121 PVGHKLAYV-WNNDIYVKIEPNLPSYRITWT-------------------GKEDIIYNGITDWVYEEEVFSAYSALWWSP 180 (740)
T ss_dssp SSTTCEEEE-ETTEEEEESSTTSCCEECCSC-------------------CBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred CCCCEEEEE-ECCeEEEEECCCCceEEEcCC-------------------CCccceecCcccccccchhcCCCcceEECC
Confidence 999999887 468999999887643321000 001112223332 223589999
Q ss_pred CCCEEEEEECCC------------------------------------cEEEEECCC---Ce--EEEEEe------cCCC
Q psy11015 303 DGEQVITASWDR------------------------------------VANLFDVET---GT--ILQSLT------EPGE 335 (360)
Q Consensus 303 ~g~~l~tgs~dg------------------------------------~i~iwd~~~---~~--~~~~l~------~h~~ 335 (360)
||++|+.++.|. .|++||+.+ +. ....+. +|..
T Consensus 181 Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (740)
T 4a5s_A 181 NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDH 260 (740)
T ss_dssp TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCE
T ss_pred CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCe
Confidence 999998876332 488899988 73 223343 2777
Q ss_pred ceEEEEEcCCCCEEEcc
Q psy11015 336 AIRAAAGRTGGPIRASP 352 (360)
Q Consensus 336 ~v~~~~~~~~g~~las~ 352 (360)
.+..++|+|+|++++..
T Consensus 261 ~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 261 YLCDVTWATQERISLQW 277 (740)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred EEEEEEEeCCCeEEEEE
Confidence 89999999999966543
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.35 E-value=2.4e-11 Score=111.35 Aligned_cols=160 Identities=9% Similarity=-0.014 Sum_probs=118.3
Q ss_pred eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEE--eeCCCEEEE
Q psy11015 162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF--LPNKDLVLS 239 (360)
Q Consensus 162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~--~p~~~~l~s 239 (360)
+|.++..++.......+|...+.+++|+|+++.|+.++.++.|++||+.+++....+..+.+.+....| +|++.+++.
T Consensus 62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence 344455566666666777777777889999999999999999999999999887777766666655544 789988874
Q ss_pred E----------------------eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEE
Q psy11015 240 A----------------------SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIA 297 (360)
Q Consensus 240 ~----------------------s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 297 (360)
. +.+..|.+||+.++ ....+..+...+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-----------------------------~~~~l~~~~~~~~~ 192 (388)
T 3pe7_A 142 IEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-----------------------------ESTVILQENQWLGH 192 (388)
T ss_dssp EEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-----------------------------CEEEEEEESSCEEE
T ss_pred ccccCcccccccccchhhhhhccCCcceEEEEECCCC-----------------------------ceEEeecCCccccc
Confidence 3 24467889998876 23344456677899
Q ss_pred EEEcC-CCCEEEEEECC------CcEEEEECCCCeEEEEEecCC--CceEEEEEcCCCCEEEc
Q psy11015 298 ADWLS-DGEQVITASWD------RVANLFDVETGTILQSLTEPG--EAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 298 i~~sp-~g~~l~tgs~d------g~i~iwd~~~~~~~~~l~~h~--~~v~~~~~~~~g~~las 351 (360)
++|+| +|++|+.++.+ ..|.++|...+. ...+..+. ..+..++|+|+|+.++.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEE
Confidence 99999 99999877753 378888876554 34444443 35788999999996654
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.34 E-value=5.8e-12 Score=124.08 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=114.4
Q ss_pred eeeeec-----CCCCEEEEEECCCCCEEEEEeCC----------CcEEEEECCC------CeEEEEEe-CCCcCeEEEEE
Q psy11015 173 IRSFSG-----HRDGVWDVAVRPGQPVLGSASAD----------RTVRLWSTQT------GKCVLQYS-GHSGSVNSVRF 230 (360)
Q Consensus 173 ~~~l~~-----h~~~V~~l~~~~~~~~l~sgs~D----------g~v~iwd~~~------~~~~~~~~-~h~~~v~~i~~ 230 (360)
.+.+.. |...+.+++|+|+|+.|++++.| ..|++||+.+ +.. ..+. .+...+..++|
T Consensus 117 ~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~ 195 (662)
T 3azo_A 117 PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRL 195 (662)
T ss_dssp CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEE
T ss_pred CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceE
Confidence 445555 67789999999999999999887 5899999988 554 4454 56678889999
Q ss_pred eeCCCEEEEEeCCC--------cEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 231 LPNKDLVLSASGDK--------SVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 231 ~p~~~~l~s~s~d~--------~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
+|||+.|+.++.++ .|.+||+. ++... .......+|...+..++|+
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-------------------------~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-------------------------DTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-------------------------EEEEEEEETTBCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc-------------------------ccEEeCCCCCceEcceEEC
Confidence 99999998877553 79999987 34100 1122233457789999999
Q ss_pred CCCCEEEEEECCC--cEEEEECCCCeEEEEEecCCCc--------eEEEEEcCCCCEEEcccc
Q psy11015 302 SDGEQVITASWDR--VANLFDVETGTILQSLTEPGEA--------IRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 302 p~g~~l~tgs~dg--~i~iwd~~~~~~~~~l~~h~~~--------v~~~~~~~~g~~las~~~ 354 (360)
|||+++++++.+| .|.+||+.+++.......+... +.+++|+|++.+++++..
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 9999888888888 5666777677654433333222 567889999999888754
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.33 E-value=1.1e-11 Score=122.07 Aligned_cols=153 Identities=18% Similarity=0.119 Sum_probs=111.4
Q ss_pred eeeeecCCCCEE---------EEEEC--CCCCE-EEEEeC-CCcEEEEECC--CCeEEEEEeC-----CCcCeEEEEEee
Q psy11015 173 IRSFSGHRDGVW---------DVAVR--PGQPV-LGSASA-DRTVRLWSTQ--TGKCVLQYSG-----HSGSVNSVRFLP 232 (360)
Q Consensus 173 ~~~l~~h~~~V~---------~l~~~--~~~~~-l~sgs~-Dg~v~iwd~~--~~~~~~~~~~-----h~~~v~~i~~~p 232 (360)
.+.+.+|...+. ...|+ |||+. |+.++. +..|.+|++. .......+.. |...+.+++|+|
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC
Confidence 456666766655 55554 99987 665554 5667777765 2033455555 667889999999
Q ss_pred CCCEEEEEeCC----------CcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcE
Q psy11015 233 NKDLVLSASGD----------KSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVV 295 (360)
Q Consensus 233 ~~~~l~s~s~d----------~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v 295 (360)
||+.|++++.| ..|.+||+.+ + ....+. .+...+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~l~~~~~~~~ 190 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS-----------------------------AVRELSDDAHRFV 190 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG-----------------------------GSEESSCSCSSEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC-----------------------------ceeEEEecCCCcc
Confidence 99999988877 5799999876 3 223344 555678
Q ss_pred EEEEEcCCCCEEEEEECCC--------cEEEEECC-CC---eEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 296 IAADWLSDGEQVITASWDR--------VANLFDVE-TG---TILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 296 ~~i~~sp~g~~l~tgs~dg--------~i~iwd~~-~~---~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.+++|+|||++|+.++.++ .|++||+. ++ .......+|...+..++|+|+|++++++..
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence 8899999999999887553 79999998 57 444444556788999999999997776653
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.30 E-value=2e-10 Score=104.81 Aligned_cols=184 Identities=7% Similarity=-0.069 Sum_probs=121.8
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC------CcCeEEEEE
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH------SGSVNSVRF 230 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h------~~~v~~i~~ 230 (360)
..+++.+.++..+..+ .++|+|+++++++++ .+++|.+||..+++.+..+... ......++|
T Consensus 38 ~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 38 YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ 115 (361)
T ss_dssp TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE
Confidence 3456667777777665 899999999988886 3678999999999888887632 245678999
Q ss_pred eeCCCEEEEEeC--CCcEEEEEcccCeeEee-eCCCCC------CCC-----------CC--CCCCCCCccc--------
Q psy11015 231 LPNKDLVLSASG--DKSVHIWQAVINWECLV-SNNDND------SDL-----------DE--SKEPDESSIT-------- 280 (360)
Q Consensus 231 ~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~-~~~~~~------~~~-----------~~--~~~~~~~~~~-------- 280 (360)
+|+|++++++.. +++|.+||+.++..... +..... +.. .. ..........
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~ 195 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM 195 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence 999999988864 68999999988866544 221110 000 00 0000000000
Q ss_pred -----------------------cccceeEeeCCC-----------------------CcEEEEEEcCCCCEEEEEEC--
Q psy11015 281 -----------------------LRTPVKELLGHS-----------------------NVVIAADWLSDGEQVITASW-- 312 (360)
Q Consensus 281 -----------------------~~~~~~~~~~h~-----------------------~~v~~i~~sp~g~~l~tgs~-- 312 (360)
....+..+.... .....++|+|++++++++..
T Consensus 196 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~ 275 (361)
T 2oiz_A 196 FSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPD 275 (361)
T ss_dssp SCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESS
T ss_pred EcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccC
Confidence 000011111000 00112688999888876543
Q ss_pred ---------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 313 ---------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 313 ---------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.+.|.+||+.+++.+.++..+. +.+++|+|+|++++++..
T Consensus 276 ~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 276 GKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp CCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred CCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 3479999999999999998876 899999999998887764
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.29 E-value=1.4e-10 Score=102.48 Aligned_cols=179 Identities=13% Similarity=0.076 Sum_probs=123.4
Q ss_pred eeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 172 KIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 172 ~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
.+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 3445556667788999999998 8889999999999999887 667777788899999999999888777788999999
Q ss_pred cccCeeEeeeCCCCC----CCCCCCCCCCC-----------------------------CccccccceeEeeCCCCcEEE
Q psy11015 251 AVINWECLVSNNDND----SDLDESKEPDE-----------------------------SSITLRTPVKELLGHSNVVIA 297 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~h~~~v~~ 297 (360)
..++........... ........+.. ...........+..+...+.+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNG 176 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCcc
Confidence 977654322111000 00000000000 000001122334455567789
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECC-CCeE---EEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015 298 ADWLSDGEQVITASWDRVANLFDVE-TGTI---LQSLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 298 i~~sp~g~~l~tgs~dg~i~iwd~~-~~~~---~~~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
++|+|+|+.+++.+.++.|.+||+. ++.. ...+..+...+.+++++++|++.++.
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 9999999999777888999999986 5554 33443345567789999999977766
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.25 E-value=6.4e-10 Score=99.99 Aligned_cols=146 Identities=10% Similarity=0.018 Sum_probs=112.8
Q ss_pred CCCEEEEEECCCCCEEEEEeCC------------------------CcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCC
Q psy11015 180 RDGVWDVAVRPGQPVLGSASAD------------------------RTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNK 234 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~D------------------------g~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~ 234 (360)
-+.+.+++++|+|+++++.+.+ ++|.+||..+++.+..+. ++-..+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888877 479999999998877665 444678999999999
Q ss_pred CEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe---------eCCCCcEEEEEEcC-CC
Q psy11015 235 DLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL---------LGHSNVVIAADWLS-DG 304 (360)
Q Consensus 235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~i~~sp-~g 304 (360)
+++++...++.|++||...... .+..+ .++-..+..++++| +|
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~---------------------------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEG---------------------------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSC---------------------------CSEEESBTTBCCCSTTCCSSEEEEEECTTTC
T ss_pred CEEEEECCCCEEEEEeCCCCeE---------------------------EEEEecccCCCCCCccccCCCcEEEEeCCCC
Confidence 9888888899999999753310 11111 23445788999999 78
Q ss_pred CEEEEEE-CCCcEEEEECCCCeEEEEEecCC----------CceEEEEEcCC-CCEEEccc
Q psy11015 305 EQVITAS-WDRVANLFDVETGTILQSLTEPG----------EAIRAAAGRTG-GPIRASPL 353 (360)
Q Consensus 305 ~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~----------~~v~~~~~~~~-g~~las~~ 353 (360)
..+++.+ .++.|++|| .+|..+..+.... .....++++|+ |.++++..
T Consensus 156 ~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp CEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred eEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 8888886 689999999 6688777775322 23789999998 77766654
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.22 E-value=2.4e-09 Score=95.95 Aligned_cols=150 Identities=8% Similarity=-0.046 Sum_probs=110.8
Q ss_pred eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC----CcE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSV 246 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d----~~i 246 (360)
.....+.++...+.+++|++++.+++++..++.|.+||..+++.......+...+.+++|+|+|+++++...+ +.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 4455667777888999999999988889999999999999887665554567789999999999988877766 689
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEEC------CCcEEE
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW------DRVANL 318 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~------dg~i~i 318 (360)
.+||..++... ..+. .+...+..++++|+|+.+++... .+.|..
T Consensus 115 ~~~d~~~~~~~----------------------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~ 166 (333)
T 2dg1_A 115 FAATENGDNLQ----------------------------DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY 166 (333)
T ss_dssp EEECTTSCSCE----------------------------EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE
T ss_pred EEEeCCCCEEE----------------------------EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE
Confidence 99998765221 0111 23457899999999988876654 355677
Q ss_pred EECCCCeEEEEEecCCCceEEEEEcCCCCEE
Q psy11015 319 FDVETGTILQSLTEPGEAIRAAAGRTGGPIR 349 (360)
Q Consensus 319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~~l 349 (360)
||..+++... +..+...+..++|+|+|..+
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 167 VSPDFRTVTP-IIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp ECTTSCCEEE-EEEEESSEEEEEECTTSSEE
T ss_pred EeCCCCEEEE-eecCCCcccceEECCCCCEE
Confidence 7766555433 32333457899999999743
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.22 E-value=3.7e-10 Score=101.51 Aligned_cols=146 Identities=16% Similarity=0.229 Sum_probs=110.9
Q ss_pred cCCCCEEEEEECC-CCCEEEEEe-CCCcEEEEECCCCeEEEEEeC----------CCcCeEEEEEeeC-CCEEEEEeCCC
Q psy11015 178 GHRDGVWDVAVRP-GQPVLGSAS-ADRTVRLWSTQTGKCVLQYSG----------HSGSVNSVRFLPN-KDLVLSASGDK 244 (360)
Q Consensus 178 ~h~~~V~~l~~~~-~~~~l~sgs-~Dg~v~iwd~~~~~~~~~~~~----------h~~~v~~i~~~p~-~~~l~s~s~d~ 244 (360)
++....+.++++| ++.++++.+ .++.|++|+ ..+..+..+.. +-.....|+++|+ +.++++...++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~ 218 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG 218 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence 4556789999999 788888886 699999999 56777776642 2234899999998 77788888899
Q ss_pred cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe--eCCCCcEEEEEEcCCCCEEEE-------EECCCc
Q psy11015 245 SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVIT-------ASWDRV 315 (360)
Q Consensus 245 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~sp~g~~l~t-------gs~dg~ 315 (360)
.|++||..++.. +..+ ..+...+.+++|+| |..+++ .+.+..
T Consensus 219 ~I~~~~~~~G~~----------------------------~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 219 RIQCFKTDTKEF----------------------------VREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp EEEEEETTTCCE----------------------------EEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCC
T ss_pred EEEEEECCCCcE----------------------------EEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcE
Confidence 999999876632 2233 24556788899999 433333 334558
Q ss_pred EEEEECCCCeEEEEEe---cCCCceEEEEEcCCCCEEEccc
Q psy11015 316 ANLFDVETGTILQSLT---EPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 316 i~iwd~~~~~~~~~l~---~h~~~v~~~~~~~~g~~las~~ 353 (360)
+++||..+++.+..+. .+-..+.+++++|+|.++++..
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 9999999999998884 5667789999999998777654
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.22 E-value=1.6e-10 Score=114.91 Aligned_cols=147 Identities=9% Similarity=-0.010 Sum_probs=105.9
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-------
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS------- 245 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg-----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~------- 245 (360)
+|...+.+++|+|||+.|+.++.++ +|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555688999999999888776543 8999999999876643322 23678999999999999888776
Q ss_pred ---------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC----
Q psy11015 246 ---------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---- 312 (360)
Q Consensus 246 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~---- 312 (360)
|++|++.++.... ..+.....|...+.++.|+|+|++|+.++.
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~------------------------~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSED------------------------ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGC------------------------EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred ccccCCCCEEEEEECCCCcccc------------------------eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 9999987652100 012222235566889999999999987765
Q ss_pred -CCcEEEEECCC------Ce-EEEEEecCCCceEEEEEcCCCCEEE
Q psy11015 313 -DRVANLFDVET------GT-ILQSLTEPGEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 313 -dg~i~iwd~~~------~~-~~~~l~~h~~~v~~~~~~~~g~~la 350 (360)
+..|.+||+.+ +. ....+..+...+.. .|+|+|..++
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 301 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFT 301 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEE
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEE
Confidence 56899999976 43 35666666666655 4777776554
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.20 E-value=3.1e-09 Score=93.16 Aligned_cols=146 Identities=13% Similarity=0.105 Sum_probs=110.6
Q ss_pred cCCCCEEEEEE-CCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015 178 GHRDGVWDVAV-RPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 254 (360)
Q Consensus 178 ~h~~~V~~l~~-~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~ 254 (360)
+|...+.++++ .+++.++++... ++.|.+|| .+++.+..+.. +...+.+++++|+|+++++...++.|.+||....
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 35567899999 577766666643 88999999 56777776643 3457899999999998888888899999985422
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
.+..+. ++...+.+++++|+|+.+++.+.++.|++||. .+..+..+..
T Consensus 153 -----------------------------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 202 (286)
T 1q7f_A 153 -----------------------------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG 202 (286)
T ss_dssp -----------------------------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred -----------------------------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence 122222 34456899999999998888788999999997 5667777754
Q ss_pred C--CCceEEEEEcCCCCEEEcccc
Q psy11015 333 P--GEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 333 h--~~~v~~~~~~~~g~~las~~~ 354 (360)
+ -..+.+++++++|+++++...
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECS
T ss_pred CCccCCCcEEEECCCCCEEEEeCC
Confidence 4 357899999999998887653
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.19 E-value=1e-10 Score=106.84 Aligned_cols=136 Identities=10% Similarity=0.026 Sum_probs=102.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEE
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-----------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd 250 (360)
.++.+++++...++++|+.+ .+++|++...+ ..... .+.+ |+.++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68899999999999999998 45569865332 11223 3666 999999 88999988 889999999
Q ss_pred cccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015 251 AVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330 (360)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l 330 (360)
+.+.. .......|...+.++.+.+. .+++++.||.|.+||+.++....
T Consensus 113 v~sl~----------------------------~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 113 LEELS----------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp SSSTT----------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE--
T ss_pred chhhh----------------------------ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc--
Confidence 87652 12234456667888777654 38889999999999999887653
Q ss_pred ecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 331 TEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 331 ~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
+...|++++|+|.| ..++..++.++
T Consensus 161 --~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 161 --LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp --EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred --ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 34589999999999 55666666543
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=1.5e-09 Score=98.97 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=55.3
Q ss_pred cccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC--eEEEEEecCCCceEEEEEcCCCC
Q psy11015 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTEPGEAIRAAAGRTGGP 347 (360)
Q Consensus 281 ~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~ 347 (360)
..+.+..+..+. +.+++|+|+|++|++++. +.|.+||..++ +.+.++..+......++++|+|.
T Consensus 295 t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 295 TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 345667777666 899999999999998887 99999999999 99999877777889999999985
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.16 E-value=2.8e-10 Score=112.96 Aligned_cols=148 Identities=9% Similarity=-0.015 Sum_probs=104.3
Q ss_pred cCCCCEEEEEECCCCCEEE-----EEeCCCcEEEEECCCCeEEEEEeCCCcCe--EEEEEeeCCCEEEEEeCCCc-----
Q psy11015 178 GHRDGVWDVAVRPGQPVLG-----SASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKDLVLSASGDKS----- 245 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~-----sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v--~~i~~~p~~~~l~s~s~d~~----- 245 (360)
+|...+.+++|+|||+.|+ +|+.+.+|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 5666789999999999888 44556789999999987641 1122222 68999999999999998876
Q ss_pred --------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC---
Q psy11015 246 --------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--- 314 (360)
Q Consensus 246 --------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg--- 314 (360)
|++|++.++... ...+.....|...+.++.|+|+|++|+.++.++
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 251 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSK------------------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSE 251 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGG------------------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTE
T ss_pred ccCCCCCEEEEEECCCCchh------------------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCc
Confidence 999998766211 012233334566789999999999998877666
Q ss_pred -cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 315 -VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 315 -~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
.|.+|+..++. ...+..+...+....|++++ +++++.
T Consensus 252 ~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~~~s~ 289 (695)
T 2bkl_A 252 NDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDR-FYVLTD 289 (695)
T ss_dssp EEEEEECTTCSS-CEEEEECSSCCEEEEEETTE-EEEEEC
T ss_pred eEEEEEcCCCCc-eEEeecCCCceEEEEecCCc-EEEEEC
Confidence 67788766664 34455555566666675444 555443
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.13 E-value=1.7e-09 Score=97.36 Aligned_cols=133 Identities=12% Similarity=0.133 Sum_probs=93.5
Q ss_pred EEEEEECCCCCEEEEEeCC---------------------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC
Q psy11015 183 VWDVAVRPGQPVLGSASAD---------------------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs~D---------------------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~ 235 (360)
+.+++|+|+++.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 9999999999988887643 5799999999887555554 3 78899999999
Q ss_pred EEEEEeCCC-------cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015 236 LVLSASGDK-------SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 308 (360)
Q Consensus 236 ~l~s~s~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~ 308 (360)
++++++.+. ...||.+.++. ...+..+ ..+..+ +|+|++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~-----------------------------~~~l~~~-~~~~~~--spdg~~l~ 230 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGK-----------------------------EEKMFEK-VSFYAV--DSDGERIL 230 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTE-----------------------------EEEEEEE-ESEEEE--EECSSCEE
T ss_pred EEEEEecccccccccccccEEEeCCCc-----------------------------eEEeccC-cceeeE--CCCCCEEE
Confidence 888776652 45566544331 2223333 444444 99999998
Q ss_pred EEECC--------CcEEEEECCCCeEEEEEecCCCceEE-EEEcCCCCEEEcccc
Q psy11015 309 TASWD--------RVANLFDVETGTILQSLTEPGEAIRA-AAGRTGGPIRASPLL 354 (360)
Q Consensus 309 tgs~d--------g~i~iwd~~~~~~~~~l~~h~~~v~~-~~~~~~g~~las~~~ 354 (360)
.++.+ ..|.+|| +++.......+...+.. ++|+ +| +++++..
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 87754 3688888 66654444556678886 8999 88 7776654
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.12 E-value=1.4e-09 Score=98.00 Aligned_cols=136 Identities=11% Similarity=0.098 Sum_probs=93.5
Q ss_pred CCEEEEEECCCCCEEEEEeCC---C--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC------------
Q psy11015 181 DGVWDVAVRPGQPVLGSASAD---R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------------ 243 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~D---g--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d------------ 243 (360)
..+.+++|+|+|+.|+.++.+ + .|.+|++.+++.......+ . +.+++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 468889999999988887754 3 4888899888766655533 4 9999999999988887642
Q ss_pred ---------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015 244 ---------------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 308 (360)
Q Consensus 244 ---------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~ 308 (360)
..|.+||+.++.. +..+.. . .+..++|+|+| .++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~----------------------------~~~l~~-~-~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEV----------------------------IEEFEK-P-RFSSGIWHRDK-IVV 185 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEE----------------------------EEEEEE-E-TTCEEEEETTE-EEE
T ss_pred cceeecCcccccCccceEEEEECCCCeE----------------------------EeeecC-C-CcccccCCCCe-EEE
Confidence 4688888876632 122222 2 67789999999 888
Q ss_pred EEECCC-------cEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 309 TASWDR-------VANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 309 tgs~dg-------~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
+++.++ ...||.+.+++. ..+..+ ..+..+ +|+|+.++...
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred EEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEE
Confidence 876652 344544445554 444444 555554 99998776544
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=1.3e-10 Score=106.58 Aligned_cols=140 Identities=9% Similarity=-0.045 Sum_probs=97.0
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEE-------------------EEEeeCCCEEEEE---
Q psy11015 183 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS-------------------VRFLPNKDLVLSA--- 240 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~-------------------i~~~p~~~~l~s~--- 240 (360)
...+.|+|+++.|+.++.++.|++||+.+++....+..+.+.... +.|+|+++.++.+
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 334789999999999999999999999998876666655443322 3456666655443
Q ss_pred --eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECC----
Q psy11015 241 --SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD---- 313 (360)
Q Consensus 241 --s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~d---- 313 (360)
..+..|.+||+.++. ...+..+...+..+.|+| +|..|+..+.+
T Consensus 163 ~~~~~~~l~~~d~~~g~-----------------------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~ 213 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGE-----------------------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDL 213 (396)
T ss_dssp HTCCCEEEEEEETTTCC-----------------------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSS
T ss_pred cCCCcceEEEEECCCCc-----------------------------EEeeccCCcccccceECCCCCCEEEEEecCCCCC
Confidence 355678888887652 222334566789999999 78877766543
Q ss_pred --CcEEEEECCCCeEEEEEecC--CCceEEEEEcCCCCEEEcc
Q psy11015 314 --RVANLFDVETGTILQSLTEP--GEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 314 --g~i~iwd~~~~~~~~~l~~h--~~~v~~~~~~~~g~~las~ 352 (360)
..|.+||+.++.. ..+..+ ...+..++|+|+|+.++..
T Consensus 214 ~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 214 VDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYV 255 (396)
T ss_dssp CSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEE
Confidence 3688899876643 333333 3358889999999866544
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=3.9e-09 Score=92.47 Aligned_cols=171 Identities=9% Similarity=0.013 Sum_probs=123.5
Q ss_pred cCCeEEEeeecCccceeeeeeeecCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCeEEEEEee
Q psy11015 155 QTSKIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLP 232 (360)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p 232 (360)
.....+.+|. ..+++.+.++..+. ..+.++++.|+|++++ +.++.|..||. +|+.+..+..+. ..+.++.+.|
T Consensus 12 ~~~~~v~~~d--~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~ 86 (276)
T 3no2_A 12 SGWNKIAIIN--KDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP 86 (276)
T ss_dssp TTCSEEEEEE--TTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred CCCCEEEEEE--CCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence 3344444443 44677778887776 5789999999999888 45788999999 899999998653 4788999999
Q ss_pred CCCEEEEEeC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015 233 NKDLVLSASG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 311 (360)
Q Consensus 233 ~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs 311 (360)
+|+++++.+. ++.+..+|. .+......... ....++......+++.++|+++++.+
T Consensus 87 dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~----------------------~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNM-KGEVLSKTEFE----------------------TGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp TSCEEEEEESTTEEEEEECT-TSCEEEEEEEC----------------------CSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred CCCEEEEecCCCCEEEEEeC-CCCEEEEEecc----------------------CCCCcccccccCceECCCCCEEEEec
Confidence 9999999887 777777764 44332221000 00011222344567889999999999
Q ss_pred CCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEccccc
Q psy11015 312 WDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLL 355 (360)
Q Consensus 312 ~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~ 355 (360)
.++.|..||.. |+.+.++..+ ....++...++|++++++.++
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTT
T ss_pred CCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCC
Confidence 99999999987 9999888765 345667888999988876644
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=5.8e-10 Score=100.04 Aligned_cols=142 Identities=9% Similarity=-0.008 Sum_probs=111.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS 260 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 260 (360)
..|++++|++++..+++.+.++.++.| .+.....+.++...+.+++|+|+|++++++..++.|.+||..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~---- 78 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI---- 78 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE----
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE----
Confidence 457788899988878877889999999 4666777777888899999999999888888899999999876521
Q ss_pred CCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC----CcEEEEECCCCeEEEEEe--cCC
Q psy11015 261 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVANLFDVETGTILQSLT--EPG 334 (360)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d----g~i~iwd~~~~~~~~~l~--~h~ 334 (360)
......+...+.+++|+|+|++++++..+ +.|.+||..++.....+. .+.
T Consensus 79 ------------------------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 79 ------------------------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp ------------------------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred ------------------------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 11122456789999999999988877766 689999998776543443 245
Q ss_pred CceEEEEEcCCCCEEEccc
Q psy11015 335 EAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 335 ~~v~~~~~~~~g~~las~~ 353 (360)
..+.+++++|+|.+.++..
T Consensus 135 ~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CCEEEEEECTTSCEEEEEC
T ss_pred CcccceEECCCCCEEEEec
Confidence 5789999999999887765
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.07 E-value=1.6e-09 Score=99.10 Aligned_cols=145 Identities=10% Similarity=-0.019 Sum_probs=98.6
Q ss_pred ecCCCCEEEEEECC-CCCEEEEEeCC------CcEEEEECCCCeEEEEEeCC--CcCeEEEEEeeCCCEEEEEeCC----
Q psy11015 177 SGHRDGVWDVAVRP-GQPVLGSASAD------RTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGD---- 243 (360)
Q Consensus 177 ~~h~~~V~~l~~~~-~~~~l~sgs~D------g~v~iwd~~~~~~~~~~~~h--~~~v~~i~~~p~~~~l~s~s~d---- 243 (360)
..+...+..+.|+| ++..|+.++.+ ..|.+||+..+.... +..+ ...+..+.|+|+|+.|+.++.+
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT 262 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTC
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCc
Confidence 35677899999999 78767666544 368889987665333 3323 2358889999999987766543
Q ss_pred -CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEE----------
Q psy11015 244 -KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITAS---------- 311 (360)
Q Consensus 244 -~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs---------- 311 (360)
+.|.+||+.++.... +..+.+ .. +.|+| +|++++.++
T Consensus 263 ~~~l~~~d~~~g~~~~--------------------------l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 263 DRVIYKANPETLENEE--------------------------VMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp CEEEEEECTTTCCEEE--------------------------EEECCS----EE-EEEECSSSSEEEEEECCC-------
T ss_pred cceEEEEECCCCCeEE--------------------------eeeCCC----CC-CCccCCCCceEEEecCCcceeeccc
Confidence 449999987663211 111111 22 88999 999888765
Q ss_pred ------CCCcEEEEECCCCeEEEEEecCCC-----------ceEEEEEcCCCCEEEcccc
Q psy11015 312 ------WDRVANLFDVETGTILQSLTEPGE-----------AIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 312 ------~dg~i~iwd~~~~~~~~~l~~h~~-----------~v~~~~~~~~g~~las~~~ 354 (360)
.++.|.+||+.+++. ..+..+.. .+..++|+|+|..++.++.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 347899999988874 34544444 2567899999987775543
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.05 E-value=1.1e-08 Score=101.67 Aligned_cols=145 Identities=8% Similarity=-0.092 Sum_probs=104.7
Q ss_pred EEEEEECCCCCEEEEEeCCCc----------------EEEEECCCCeE--EEEEe--CCCcCeEEEEEeeCCCEEEEEeC
Q psy11015 183 VWDVAVRPGQPVLGSASADRT----------------VRLWSTQTGKC--VLQYS--GHSGSVNSVRFLPNKDLVLSASG 242 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs~Dg~----------------v~iwd~~~~~~--~~~~~--~h~~~v~~i~~~p~~~~l~s~s~ 242 (360)
+.+++|+|||+.|+.++.++. |++|++.++.. ...+. .|...+..+.|+|+|++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 667899999999999988876 99999988752 23333 35566889999999998887764
Q ss_pred -----CCcEEEEEccc------CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015 243 -----DKSVHIWQAVI------NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 311 (360)
Q Consensus 243 -----d~~i~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs 311 (360)
+..|.+||+.+ +. .....+..+...+.. .|+|+|+.|+..+
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~---------------------------~~~~~l~~~~~~~~~-~~s~dg~~l~~~s 304 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGI---------------------------LKWVKLIDNFEGEYD-YVTNEGTVFTFKT 304 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSS---------------------------CCCEEEECSSSSCEE-EEEEETTEEEEEE
T ss_pred ccCCCccEEEEEECcccccccCCc---------------------------cceEEeeCCCCcEEE-EEeccCCEEEEEE
Confidence 56799999875 21 023445556555554 4889999887666
Q ss_pred CC----CcEEEEECCCCe--EEEEEecCCC--ceEEEEEcCCCCEEEccccc
Q psy11015 312 WD----RVANLFDVETGT--ILQSLTEPGE--AIRAAAGRTGGPIRASPLLL 355 (360)
Q Consensus 312 ~d----g~i~iwd~~~~~--~~~~l~~h~~--~v~~~~~~~~g~~las~~~~ 355 (360)
.+ +.|.+||+.++. ....+..|.. .+..++|++++.+++++...
T Consensus 305 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 305 NRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 53 359999998774 2345555543 68889999888888777643
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.03 E-value=1.6e-08 Score=88.49 Aligned_cols=156 Identities=6% Similarity=0.027 Sum_probs=120.4
Q ss_pred ceeeeeeeecCC-CCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEe------CCCcCeEEEEEeeCCCEEEEE
Q psy11015 169 SCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYS------GHSGSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 169 ~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~------~h~~~v~~i~~~p~~~~l~s~ 240 (360)
+++.+.++..+. ..+.++.+.++|+.+++.+. ++.|..+|. +|+.+..+. ++......+++.++|+++++.
T Consensus 64 ~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 64 DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 567777777653 57889999999999999887 778888885 687777664 222345567788999999999
Q ss_pred eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy11015 241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320 (360)
Q Consensus 241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd 320 (360)
+.++.|..||.. |... ..+... ..+.++.+.++|+.+++++.++.|..+|
T Consensus 143 ~~~~~v~~~d~~-G~~~----------------------------w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 143 FATSEVREIAPN-GQLL----------------------------NSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp TTTTEEEEECTT-SCEE----------------------------EEEECS-SCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred cCCCEEEEECCC-CCEE----------------------------EEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence 999999999987 6433 233322 3345677889999999999889999999
Q ss_pred CCCCeEEEEEecCC------CceEEEEEcCCCCEEEccccc
Q psy11015 321 VETGTILQSLTEPG------EAIRAAAGRTGGPIRASPLLL 355 (360)
Q Consensus 321 ~~~~~~~~~l~~h~------~~v~~~~~~~~g~~las~~~~ 355 (360)
..+|+.+..+..+. ..+..++..++|+++++++.+
T Consensus 193 ~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 193 LESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp TTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred CcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 99999998886432 227888999999999987643
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.02 E-value=4.6e-09 Score=92.62 Aligned_cols=141 Identities=16% Similarity=0.103 Sum_probs=100.2
Q ss_pred CEEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC
Q psy11015 182 GVWDVAVRPGQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~-----------------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~ 244 (360)
.+.+++++|+|+++++.+. .+.|..++.. ++ +..+..+...+..++|+|+++.+++.+.++
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~ 193 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN 193 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence 4678999999998887431 2355555554 44 344555677789999999999887778889
Q ss_pred cEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015 245 SVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323 (360)
Q Consensus 245 ~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~ 323 (360)
.|.+|++. .+.... ....+..+...+.++++.++|++.++. ++.|.+||..
T Consensus 194 ~i~~~~~~~~g~~~~-------------------------~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 194 ATHRYCLNARGETEY-------------------------QGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp EEEEEEECSSSCEEE-------------------------EEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred eEEEEEECCCCcCcC-------------------------CCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 99999986 331100 011112344566789999999876666 7899999976
Q ss_pred CeEEEEEecCCCceEEEEE-cCCCCEEEccc
Q psy11015 324 GTILQSLTEPGEAIRAAAG-RTGGPIRASPL 353 (360)
Q Consensus 324 ~~~~~~l~~h~~~v~~~~~-~~~g~~las~~ 353 (360)
++.+..+..+.. +++++| .|++..|..++
T Consensus 246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp SCEEEEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred CCEEEEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 888888887777 999999 58887444433
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.01 E-value=1.4e-08 Score=87.92 Aligned_cols=150 Identities=9% Similarity=-0.094 Sum_probs=106.6
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEee
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV 259 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~ 259 (360)
...+.++++++++.++++...++.|.+|+..+.............+.+++++|+|+++++...++.|.+||.......
T Consensus 107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-- 184 (270)
T 1rwi_B 107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-- 184 (270)
T ss_dssp CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE--
T ss_pred cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE--
Confidence 367899999999988888888899999986655433322233346789999999998887777889999997654211
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEE
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~ 339 (360)
.....+...+.++++.++|..+++...++.|.+||............+-..+.+
T Consensus 185 --------------------------~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 185 --------------------------VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLA 238 (270)
T ss_dssp --------------------------ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEE
T ss_pred --------------------------eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCcee
Confidence 111122356889999999977777777889999998755433222223356899
Q ss_pred EEEcCCCCEEEccc-ccch
Q psy11015 340 AAGRTGGPIRASPL-LLAI 357 (360)
Q Consensus 340 ~~~~~~g~~las~~-~~~i 357 (360)
++++++|++.++.. ++.|
T Consensus 239 i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 239 VAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp EEECTTCCEEEEEGGGTEE
T ss_pred EEECCCCCEEEEECCCCEE
Confidence 99999998766654 4444
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.99 E-value=3.8e-09 Score=105.57 Aligned_cols=147 Identities=18% Similarity=0.077 Sum_probs=98.6
Q ss_pred CCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc--------
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------- 245 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~-------- 245 (360)
|...+.+++|+|||+.|+.++.+ .+|++||+.+++.+.... +...+..++|+|| +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44568889999999988877654 369999999998755321 2222357899999 98888877654
Q ss_pred ------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----
Q psy11015 246 ------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----- 314 (360)
Q Consensus 246 ------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg----- 314 (360)
|.+|++.++... ...+.....+...+.++.|+|||++|+..+.++
T Consensus 239 ~~~~~~v~~~~lgt~~~~------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSA------------------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVN 294 (741)
T ss_dssp CCCCCEEEEEETTSCGGG------------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCC
T ss_pred CCCCCEEEEEECCCCchh------------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcc
Confidence 788887655210 011222223444688999999999998777544
Q ss_pred cEEEEECCCC--eEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015 315 VANLFDVETG--TILQSLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 315 ~i~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
.|.+||+.++ .+...+..+...+....+ |+|..++..
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~ 333 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFV 333 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEEEE-EETTEEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEEEe-ccCCEEEEE
Confidence 7999999877 314566656555555544 666655433
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.96 E-value=8.2e-08 Score=84.77 Aligned_cols=143 Identities=15% Similarity=0.067 Sum_probs=100.5
Q ss_pred CCEEEEEECCCCCEEEEEeCC---------CcEEEEECCC-CeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEE
Q psy11015 181 DGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVHIW 249 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~D---------g~v~iwd~~~-~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vw 249 (360)
..+++++++|+|+++++...+ ..-.||.+.. +.... +..+....+.++|+|+++.+ ++.+.++.|.+|
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~ 176 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF 176 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence 457899999999976655322 3345555543 33333 33344567899999999866 555667899999
Q ss_pred Ecc--cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 250 QAV--INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 250 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
|+. ++... .......+..+...+..+++.++|++.++...++.|..||..+|+.+
T Consensus 177 ~~d~~~G~~~-----------------------~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 177 DYDLQTGQIS-----------------------NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EECTTTCCEE-----------------------EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred eccCCCCccc-----------------------CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 873 33211 01122233334457889999999988888877889999999999999
Q ss_pred EEEecCCCceEEEEEc-CCCC
Q psy11015 328 QSLTEPGEAIRAAAGR-TGGP 347 (360)
Q Consensus 328 ~~l~~h~~~v~~~~~~-~~g~ 347 (360)
..+..+...+++++|. |++.
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGC
T ss_pred EEEECCCCCceEEEEeCCCCC
Confidence 9998887789999998 7765
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.96 E-value=4.2e-08 Score=88.05 Aligned_cols=154 Identities=8% Similarity=-0.094 Sum_probs=109.4
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----cCeEEEEEeeCCCEEEEEe
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSAS 241 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~l~s~s 241 (360)
..+++.+.++.. ......+++++++.++++...++.|.+||..+++....+.... .....+++ .++.++++..
T Consensus 71 ~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~ 148 (328)
T 3dsm_A 71 INTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW 148 (328)
T ss_dssp TTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred CcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcC
Confidence 345666677743 4678899998888555555489999999999999887776433 14567777 4555455544
Q ss_pred -CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-------
Q psy11015 242 -GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD------- 313 (360)
Q Consensus 242 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d------- 313 (360)
.+++|.+||+.++... ..+.. ......++++|+|++++++..+
T Consensus 149 ~~~~~v~viD~~t~~~~----------------------------~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVV----------------------------DELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp TTCCEEEEEETTTTEEE----------------------------EEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred CCCCEEEEEECCCCeEE----------------------------EEEEc-CCCccceEEcCCCCEEEEECCCccCCccc
Confidence 4889999999877432 22222 1234578899999877776654
Q ss_pred ---CcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEc
Q psy11015 314 ---RVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 314 ---g~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las 351 (360)
+.|.+||..+++....+... ......++|+|++..+..
T Consensus 200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 78999999999988777643 346899999998876654
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.94 E-value=2.1e-08 Score=86.77 Aligned_cols=145 Identities=10% Similarity=-0.049 Sum_probs=103.1
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
+...+.++++++++.++++.. ++.|.+||....... .+. .....+.+++++|+|+++++...++.|.+|+..+...
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~- 141 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ- 141 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-
Confidence 345688999999998666666 889999998765433 332 2335789999999999888877888999996543211
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v 337 (360)
..........+.+++++|+|+.+++...++.|.+||...+........+...+
T Consensus 142 ---------------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p 194 (270)
T 1rwi_B 142 ---------------------------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP 194 (270)
T ss_dssp ---------------------------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE
T ss_pred ---------------------------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc
Confidence 01111222356789999999977777778899999988766543333333678
Q ss_pred EEEEEcCCCCEEEccc
Q psy11015 338 RAAAGRTGGPIRASPL 353 (360)
Q Consensus 338 ~~~~~~~~g~~las~~ 353 (360)
.+++++++|.+.++..
T Consensus 195 ~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 195 WGIAVDEAGTVYVTEH 210 (270)
T ss_dssp EEEEECTTCCEEEEET
T ss_pred eEEEECCCCCEEEEEC
Confidence 9999999998776654
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.91 E-value=8.5e-08 Score=84.81 Aligned_cols=147 Identities=12% Similarity=0.034 Sum_probs=105.8
Q ss_pred CCEEEEEECCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe----eCCCEEE-EE
Q psy11015 181 DGVWDVAVRPGQPVLGSASAD---------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL----PNKDLVL-SA 240 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~D---------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~----p~~~~l~-s~ 240 (360)
..+.++++++++.++++...+ +.|..|+.. ++..... .+......++|+ |+++.++ +.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence 458899999999888777665 567777766 5543333 344567899999 9996554 44
Q ss_pred eCCCcEEEEEcc-cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEEEEEECCCcEEE
Q psy11015 241 SGDKSVHIWQAV-INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANL 318 (360)
Q Consensus 241 s~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l~tgs~dg~i~i 318 (360)
..++.|.+||+. .+.... ......+.++. ..+..++++++|+.+++...++.|.+
T Consensus 195 ~~~~~i~~~~~~~~g~~~~-----------------------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIEN-----------------------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp TTTTEEEEEEEEETTEEEE-----------------------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCCCeEEEEECCCCCcccc-----------------------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 567899999976 231110 01122333444 56788999999998888888899999
Q ss_pred EECCCCeEEEEEecCCCceEEEEEcCCCC-EEEcc
Q psy11015 319 FDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASP 352 (360)
Q Consensus 319 wd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~ 352 (360)
||..+++.+..+..+...+.+++|+|+|. +.++.
T Consensus 252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 99987877777777777899999999998 44443
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.85 E-value=8.6e-08 Score=94.97 Aligned_cols=140 Identities=8% Similarity=-0.041 Sum_probs=96.0
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--
Q psy11015 184 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK-- 244 (360)
Q Consensus 184 ~~l~~~~~~~~l~sgs~Dg~-------------v~iwd~~~~~----~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~-- 244 (360)
..++|+|+|+.|+.++.|.. |++|++.++. ++....+|...+.++.|+|+|++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999999998876 9999998875 3333344566889999999999888877665
Q ss_pred --cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE---CCCcEEEE
Q psy11015 245 --SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLF 319 (360)
Q Consensus 245 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs---~dg~i~iw 319 (360)
.|.+|+..++ ....+..+...+....| ++|..++++. .++.|.+|
T Consensus 251 ~~~l~~~~~~~~-----------------------------~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 251 ENDVYWKRPGEK-----------------------------DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp EEEEEEECTTCS-----------------------------SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEE
T ss_pred ceEEEEEcCCCC-----------------------------ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEE
Confidence 4555544322 23444455555666666 5666444443 25789999
Q ss_pred ECCCCeE--EEEEecC--CCceEEEEEcCCCCEEEcccc
Q psy11015 320 DVETGTI--LQSLTEP--GEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 320 d~~~~~~--~~~l~~h--~~~v~~~~~~~~g~~las~~~ 354 (360)
|+.++.. ...+..+ ...+..++|+ ++.++++...
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 9987752 2333333 4568888888 6667776553
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.84 E-value=1e-06 Score=84.84 Aligned_cols=166 Identities=8% Similarity=-0.097 Sum_probs=114.0
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CCeEEEEEeCCCcCeEEEEEe----eCCCEEEEE
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA 240 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~--~~~~~~~~~~h~~~v~~i~~~----p~~~~l~s~ 240 (360)
..+++.+.++... ..+..+.|+|+++++++++.|+.|.+||+. +++.+..+... .....++|+ |+|++++++
T Consensus 184 ~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~ 261 (567)
T 1qks_A 184 GSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAG 261 (567)
T ss_dssp TTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEE
T ss_pred CCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEE
Confidence 3456667676543 356789999999999999999999999996 88888888753 346899999 699988776
Q ss_pred eC-CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC-CcEEEEEEcCCCCEE-EEEECCCcEE
Q psy11015 241 SG-DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQV-ITASWDRVAN 317 (360)
Q Consensus 241 s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~sp~g~~l-~tgs~dg~i~ 317 (360)
+. ++++.++|..+......+.... ........|. ..+.++..++++..+ ++...+|.|.
T Consensus 262 n~~~~~v~ViD~~t~~~~~~i~~~~------------------~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 262 AYWPPQYVIMDGETLEPKKIQSTRG------------------MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCE------------------ECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred EccCCeEEEEECCCCcEEEEEeccc------------------cccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 64 5899999987764432210000 0000000122 267788888886654 5556679999
Q ss_pred EEECCCCeEE--EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 318 LFDVETGTIL--QSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 318 iwd~~~~~~~--~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
++|..+...+ ..+. ......++.|+|+|+++..+.
T Consensus 324 ~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 324 LVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp EEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEE
T ss_pred EEecCCCccceeeeee-ccccccCceECCCCCEEEEEe
Confidence 9998865432 2332 345677889999999876544
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.83 E-value=1.6e-07 Score=90.50 Aligned_cols=130 Identities=12% Similarity=-0.016 Sum_probs=100.7
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc--cCeeEeeeCCCCCCC
Q psy11015 190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV--INWECLVSNNDNDSD 267 (360)
Q Consensus 190 ~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~--~~~~~~~~~~~~~~~ 267 (360)
|.+.++++...+++|.++|..+++.+..+.. ...+..+.|+|+|+++++++.|+.|.+||+. ++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~------------- 230 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------------- 230 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-------------
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-------------
Confidence 4455778888899999999999999988873 4467899999999999999999999999985 43
Q ss_pred CCCCCCCCCCccccccceeEeeCCCCcEEEEEEc----CCCCEEEEEEC-CCcEEEEECCCCeEEEEEecC---------
Q psy11015 268 LDESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITASW-DRVANLFDVETGTILQSLTEP--------- 333 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s----p~g~~l~tgs~-dg~i~iwd~~~~~~~~~l~~h--------- 333 (360)
+.+..+... .....++|+ |+|+++++++. ++.+.++|..+.+.+.++...
T Consensus 231 ---------------~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 231 ---------------TTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp ---------------CEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred ---------------cEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence 223444432 346789999 69999877654 599999999999998877532
Q ss_pred --CCceEEEEEcCCCCEE
Q psy11015 334 --GEAIRAAAGRTGGPIR 349 (360)
Q Consensus 334 --~~~v~~~~~~~~g~~l 349 (360)
...+.++..++++..+
T Consensus 295 ~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEF 312 (567)
T ss_dssp ESCCCEEEEEECSSSSEE
T ss_pred cCCCceEEEEEcCCCCEE
Confidence 1257778888876543
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.82 E-value=1.6e-06 Score=75.75 Aligned_cols=144 Identities=11% Similarity=0.049 Sum_probs=105.5
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
.+...+.++++++++.++++...++.|..||.. +.. ..+. .....+.++++.|+|.++++...++.|.+||. ++.
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 345789999999999888887778999999986 432 2232 34557899999999988888777889999987 431
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPG 334 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~ 334 (360)
.. ......+...+.++++.++|+..++...++.|..||. +++.... +..+.
T Consensus 131 ~~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 182 (299)
T 2z2n_A 131 IR---------------------------EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPA 182 (299)
T ss_dssp EE---------------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred EE---------------------------EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCC
Confidence 11 0111223456889999999988887777789999998 6765432 23345
Q ss_pred CceEEEEEcCCCCEEEcc
Q psy11015 335 EAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 335 ~~v~~~~~~~~g~~las~ 352 (360)
..+.+++++++|.+.++.
T Consensus 183 ~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVE 200 (299)
T ss_dssp CCEEEEEECTTSSEEEEE
T ss_pred CcceeEEECCCCCEEEEc
Confidence 568899999999876655
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.81 E-value=6.4e-07 Score=78.28 Aligned_cols=148 Identities=9% Similarity=0.007 Sum_probs=107.9
Q ss_pred eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 254 (360)
Q Consensus 176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~ 254 (360)
+..+...+.++++++++.++++...++.|.+||.. +...... ..+...+.++++.++|.++++...++.|..||....
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence 34556789999999999888777778999999988 6533322 234567999999999998888777888999986521
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecC
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEP 333 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h 333 (360)
.. ...+......+.++++.|+|..+++...++.|..||. ++..... ...+
T Consensus 89 -~~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 89 -IK---------------------------EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp -EE---------------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred -EE---------------------------EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 10 0111123456889999999988888777899999998 6654432 2234
Q ss_pred CCceEEEEEcCCCCEEEccc
Q psy11015 334 GEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 334 ~~~v~~~~~~~~g~~las~~ 353 (360)
...+.+++++++|.+.++..
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEET
T ss_pred CCCCceEEEcCCCCEEEEeC
Confidence 56789999999998777654
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.77 E-value=7.4e-08 Score=95.45 Aligned_cols=150 Identities=11% Similarity=0.050 Sum_probs=97.4
Q ss_pred cCCCCEEEEEECCCCCEEEEE-----eCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc-------
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS------- 245 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sg-----s~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~------- 245 (360)
+|...+..++|+|||++|+-+ +...+|++||+.+|+.+.... +......++|+ ||+.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 456678899999999987743 333579999999998654311 11113578899 9999988887743
Q ss_pred ------EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEEC----CC
Q psy11015 246 ------VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASW----DR 314 (360)
Q Consensus 246 ------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~----dg 314 (360)
|++|++.++... ...+..... |...+.++.|+|||++|+.... +.
T Consensus 204 ~~~~~~v~~~~lgt~~~~------------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQED------------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp -CCCCEEEEEETTSCGGG------------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred cCCCcEEEEEECCCCccc------------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 888988765210 012222233 4456788999999998854432 25
Q ss_pred cEEEEECCCCe-EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 315 VANLFDVETGT-ILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 315 ~i~iwd~~~~~-~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
.|++||+.++. ....+..+.........++++.+++.+.
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTN 299 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEEC
T ss_pred EEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEEC
Confidence 79999998763 3456666666665553333444444443
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.77 E-value=2e-06 Score=78.48 Aligned_cols=183 Identities=9% Similarity=-0.090 Sum_probs=115.8
Q ss_pred ccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEEE
Q psy11015 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVR 229 (360)
Q Consensus 167 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i~ 229 (360)
..+++.+.++.....+ .++++|+++.++.+. .++.|.+||..+.+.+..+.-- ......+.
T Consensus 54 ~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~ 131 (373)
T 2mad_H 54 AGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNA 131 (373)
T ss_pred CCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceE
Confidence 3455666777654444 999999999888875 3678999999998877776522 12356899
Q ss_pred EeeCCCEEEEEeC--CCcEEEEEcccCeeEee-eCCCCCC---------------CCCC---------C---C-----CC
Q psy11015 230 FLPNKDLVLSASG--DKSVHIWQAVINWECLV-SNNDNDS---------------DLDE---------S---K-----EP 274 (360)
Q Consensus 230 ~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~-~~~~~~~---------------~~~~---------~---~-----~~ 274 (360)
|+|+|++++.++. ++.|.++| .++..... +....+. .... . . ..
T Consensus 132 ~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 132 NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 9999999998874 47899999 88866555 3332110 0000 0 0 00
Q ss_pred C------------CCcc---cccccee-------------EeeC----------CCCcEEEEEEcCCCCEEEEEEC----
Q psy11015 275 D------------ESSI---TLRTPVK-------------ELLG----------HSNVVIAADWLSDGEQVITASW---- 312 (360)
Q Consensus 275 ~------------~~~~---~~~~~~~-------------~~~~----------h~~~v~~i~~sp~g~~l~tgs~---- 312 (360)
. .... .....+. .+.- .......++++|+++.++.+..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 0 0000 0000000 0000 0112333778889888877653
Q ss_pred ------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015 313 ------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL 353 (360)
Q Consensus 313 ------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~ 353 (360)
++.|.++|..+++.+.++.. .....+++|+|+|+ +++++.
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 35799999999999999864 34689999999998 565543
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.76 E-value=7.7e-07 Score=82.34 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=99.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccCeeEe
Q psy11015 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECL 258 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~~~~~ 258 (360)
...+.|+|++++.++++...++.|++||..++......... .... ++|+|+++.++++..++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46789999999988888888899999999988776665543 3334 99999999988888766 78888876542210
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE----EecC
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS----LTEP 333 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~----l~~h 333 (360)
.+..+.. ....+.+++++|++..|+.+..++.|+.||..++..... ..++
T Consensus 209 -------------------------~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 209 -------------------------RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp -------------------------EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred -------------------------EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 0111112 345677899999655666677789999999987763322 1222
Q ss_pred CCce--EEEEEcC-CCCEEEcc
Q psy11015 334 GEAI--RAAAGRT-GGPIRASP 352 (360)
Q Consensus 334 ~~~v--~~~~~~~-~g~~las~ 352 (360)
...- ..++|+| ++.+.++.
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEE
T ss_pred CCCCccccEEEeCCCCEEEEEe
Confidence 2222 3899999 56665553
No 204
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.74 E-value=4.9e-07 Score=81.02 Aligned_cols=141 Identities=13% Similarity=-0.041 Sum_probs=101.8
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeee
Q psy11015 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVS 260 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 260 (360)
....++++.. +.++++...++.|.+||..+++.+..+. .......++++|++.++++...++.|.+||..++....
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~-- 119 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG-- 119 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE--
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE--
Confidence 3467777753 4466666778999999999999988886 45678999999999655555489999999998774322
Q ss_pred CCCCCCCCCCCCCCCCCccccccceeEeeCC-----CCcEEEEEEcCCCCEEEEEE--CCCcEEEEECCCCeEEEEEecC
Q psy11015 261 NNDNDSDLDESKEPDESSITLRTPVKELLGH-----SNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTEP 333 (360)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~i~~sp~g~~l~tgs--~dg~i~iwd~~~~~~~~~l~~h 333 (360)
.+... ......+++ ++..++.++ .++.|.+||..+++.+..+...
T Consensus 120 --------------------------~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 120 --------------------------YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp --------------------------EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred --------------------------EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 12111 113455666 455555555 4899999999999988888653
Q ss_pred CCceEEEEEcCCCCEEEcccc
Q psy11015 334 GEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 334 ~~~v~~~~~~~~g~~las~~~ 354 (360)
.....++++|+|++++++..
T Consensus 172 -~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 172 -IQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp -SCBCCCEECTTSEEEEEBCC
T ss_pred -CCccceEEcCCCCEEEEECC
Confidence 34578899999998777653
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.72 E-value=7.6e-07 Score=82.39 Aligned_cols=164 Identities=13% Similarity=0.024 Sum_probs=103.5
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEE----EeCCCcCe-E-EEEEeeC-CCEEEEEeCCCcEEEEEc
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSV-N-SVRFLPN-KDLVLSASGDKSVHIWQA 251 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~----~~~h~~~v-~-~i~~~p~-~~~l~s~s~d~~i~vwd~ 251 (360)
+...+++++++|++..|+.+..++.|+.||..++..... ..++.+.- . .++|+|+ +.++++...++.|..|+.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 456678999999555555577789999999987754332 22222222 3 9999995 666677777889999987
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEE
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSL 330 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l 330 (360)
........-.. ... . .... ......-.....++|+|+|+++++-+ .++.|+.||+.++.. .++
T Consensus 297 ~g~~~~~~g~~--~~~-----g-----~~dg---~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 297 DGECEWFCGSA--TQK-----T-----VQDG---LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp TCCEEEEEECT--TCC-----S-----CBCE---EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred CCCEEEEEeCC--CCC-----C-----cCCC---cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 64321111000 000 0 0000 00001123478999999999777777 789999999888864 444
Q ss_pred ecC---------------CCceEEEEEcCCCCEEEccc-ccchh
Q psy11015 331 TEP---------------GEAIRAAAGRTGGPIRASPL-LLAIR 358 (360)
Q Consensus 331 ~~h---------------~~~v~~~~~~~~g~~las~~-~~~ir 358 (360)
.++ -.....++++++|.++++-. ...||
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 443 13578999999998776654 33443
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.71 E-value=2.4e-06 Score=76.40 Aligned_cols=146 Identities=10% Similarity=0.011 Sum_probs=98.6
Q ss_pred CCEEEEEECCCCCEEEEEeC------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEE-EeCCCcEEEEEcc-
Q psy11015 181 DGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS-ASGDKSVHIWQAV- 252 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s-~s~d~~i~vwd~~- 252 (360)
..+++++++|+|+++++... .+.|..++ +++... +..+......++|+|+++.++. .+.++.|.+||+.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 36889999999987665542 24555555 555433 3233456789999999986644 4567889999975
Q ss_pred -cC-eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEE
Q psy11015 253 -IN-WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330 (360)
Q Consensus 253 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l 330 (360)
++ ... .......+......+.++++.++|++.++...++.|..||. +++.+..+
T Consensus 211 ~~Gl~~~-----------------------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 211 RTGLPTG-----------------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp TTCCBSS-----------------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred ccCCccc-----------------------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 33 100 00111222233456778999999988777767789999998 67778888
Q ss_pred ecCCCceEEEEEc-CCCCEE-Eccc
Q psy11015 331 TEPGEAIRAAAGR-TGGPIR-ASPL 353 (360)
Q Consensus 331 ~~h~~~v~~~~~~-~~g~~l-as~~ 353 (360)
..+...+++++|. +++..+ +++.
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred ECCCCCcEEEEEecCCCCEEEEEec
Confidence 7777789999998 887543 4433
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.68 E-value=1.1e-06 Score=87.72 Aligned_cols=142 Identities=15% Similarity=0.057 Sum_probs=95.4
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEECCCCe--EEEEEe--CCCcCeEEEEEeeCCCEEEEEeCCC-
Q psy11015 184 WDVAVRPGQPVLGSASADRT--------------VRLWSTQTGK--CVLQYS--GHSGSVNSVRFLPNKDLVLSASGDK- 244 (360)
Q Consensus 184 ~~l~~~~~~~~l~sgs~Dg~--------------v~iwd~~~~~--~~~~~~--~h~~~v~~i~~~p~~~~l~s~s~d~- 244 (360)
..++|+|+ +.|+.++.|+. |++|++.++. ....+. .+...+.++.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 56789999 88888887654 8999998764 233343 3334688999999999888776543
Q ss_pred ----cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC----CcE
Q psy11015 245 ----SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVA 316 (360)
Q Consensus 245 ----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d----g~i 316 (360)
.|.+||+.++.. .+...+..+...+... ++|+|+.|+..+.+ +.|
T Consensus 291 ~~~~~l~~~d~~~~~~--------------------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKI--------------------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp CSCCEEEEEEEETTEE--------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred CCcceEEEEECCCCCC--------------------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 789999875411 0023344454444444 34899998887764 459
Q ss_pred EEEECCCC--eEEEEEecCCCceEEEEEcCCCCEEEcccc
Q psy11015 317 NLFDVETG--TILQSLTEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 317 ~iwd~~~~--~~~~~l~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.+||+.++ .....+..+...+..++|. ++.++++...
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~ 382 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIH 382 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEE
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEE
Confidence 99999874 4444444555567778887 5566666543
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.67 E-value=7.6e-07 Score=80.26 Aligned_cols=169 Identities=11% Similarity=-0.034 Sum_probs=106.1
Q ss_pred cceeeeeeeec------CCCCEEEEEECCCCC-EEEEEe---CCCcEEEEECCCCeEEEEEeCCC---------------
Q psy11015 168 LSCYKIRSFSG------HRDGVWDVAVRPGQP-VLGSAS---ADRTVRLWSTQTGKCVLQYSGHS--------------- 222 (360)
Q Consensus 168 ~~~~~~~~l~~------h~~~V~~l~~~~~~~-~l~sgs---~Dg~v~iwd~~~~~~~~~~~~h~--------------- 222 (360)
.+++.++++.. +...+..+++++++. .+++.+ .++.|.+||+.+++....+.+|.
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~ 180 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP 180 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence 34455555442 234568999998644 455555 67899999999887766654431
Q ss_pred --------------cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe
Q psy11015 223 --------------GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL 288 (360)
Q Consensus 223 --------------~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (360)
..+..|+|+|+|+.|+.+..++. ++|.+....... ...........+ ..
T Consensus 181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~---------------~~~~~~~~~~~~-~~ 243 (343)
T 2qe8_A 181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSN---------------LQLTDAELGSKI-ER 243 (343)
T ss_dssp CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTC---------------TTCCHHHHHTTC-EE
T ss_pred EEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcC---------------CCCChhhhhcce-Ee
Confidence 13688999999998888877664 455543210000 000000000011 11
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEccc
Q psy11015 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 289 ~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las~~ 353 (360)
.++.+....++++++|..+++...++.|.+||..+|+........ -...++++|.++|.+++++.
T Consensus 244 ~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 244 YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 233345667899999999998888999999998567643333322 44689999999998777665
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.67 E-value=6e-06 Score=72.65 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=95.6
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----CCcCeEEEEEeeCCCEEEEEeCC---------Cc
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD---------KS 245 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~----h~~~v~~i~~~p~~~~l~s~s~d---------~~ 245 (360)
+...+.+++++++++++++. ++.|.+||..+++....... ....+++++++|+|+++++...+ ..
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 34679999999999955543 56899999988865443332 12358899999999977654322 33
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE-EEECCCcEEEEEC--C
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--E 322 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~-tgs~dg~i~iwd~--~ 322 (360)
..||.+.... ....+..+-...+.++|+|+++.++ +.+.++.|.+||+ .
T Consensus 130 ~~l~~~d~~g----------------------------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~ 181 (297)
T 3g4e_A 130 GALYSLFPDH----------------------------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ 181 (297)
T ss_dssp EEEEEECTTS----------------------------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred cEEEEEECCC----------------------------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence 4666654321 1111222334568899999999775 4556789999987 4
Q ss_pred CCeEE-----EEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 323 TGTIL-----QSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 323 ~~~~~-----~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
+|... ..+..+......++++++|++.++..
T Consensus 182 ~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~ 217 (297)
T 3g4e_A 182 TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY 217 (297)
T ss_dssp TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc
Confidence 56432 22233345678999999998777654
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.61 E-value=2e-05 Score=68.69 Aligned_cols=146 Identities=11% Similarity=0.004 Sum_probs=104.6
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~ 256 (360)
.+...+.++++.+++.+.++...++.|..||.. ++... .+......+.++++.++|.++++...++.|..||.. +..
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 345679999999999888877778899999988 65432 222234678999999999988887778889999876 321
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCCC
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPGE 335 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~~ 335 (360)
. ...+......+.++++.++|+..++...++.|..||. +++.... +..+..
T Consensus 137 ~---------------------------~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 188 (300)
T 2qc5_A 137 Y---------------------------EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAA 188 (300)
T ss_dssp E---------------------------EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred E---------------------------EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCC
Confidence 1 0111223456889999999997776666788999998 5654432 223445
Q ss_pred ceEEEEEcCCCCEEEccc
Q psy11015 336 AIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 336 ~v~~~~~~~~g~~las~~ 353 (360)
.+.+++++++|.+.++..
T Consensus 189 ~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 189 APVGITSGNDGALWFVEI 206 (300)
T ss_dssp CEEEEEECTTSSEEEEET
T ss_pred CcceEEECCCCCEEEEcc
Confidence 789999999998766553
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.61 E-value=9.1e-07 Score=78.27 Aligned_cols=150 Identities=14% Similarity=0.013 Sum_probs=102.5
Q ss_pred eeeeeeecCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
..+..+..+........|+|+++ +++++..++.|..|+. ++. ...+..+...+..++++++|+++++...++.|.+|
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 34455556666778899999998 7788888999999998 454 34555567789999999999977666666889999
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC-CCcEEEEEEcCCCCEEEE----EEC------------
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVIT----ASW------------ 312 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~sp~g~~l~t----gs~------------ 312 (360)
+.. +.... ......+. ...+..+++.|+|+..+| |..
T Consensus 113 ~~~-g~~~~-------------------------~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 113 DAD-GQAHL-------------------------LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp CTT-SCEEE-------------------------EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred CCC-CCEEE-------------------------EEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 875 32110 00011111 134667999999998887 332
Q ss_pred -CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEE
Q psy11015 313 -DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 313 -dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~la 350 (360)
.+.|..||..+++..... .......++|+|+|..+.
T Consensus 167 ~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp SCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEE
T ss_pred CCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEE
Confidence 256778887666543333 334568899999998544
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.59 E-value=8.6e-06 Score=70.98 Aligned_cols=146 Identities=10% Similarity=0.006 Sum_probs=106.3
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~ 256 (360)
.....+.++++.+++.+.++...++.|.+||.. ++... .+..+...+.++++.++|.++++...++.|..||.. +..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345678999999999888887788999999988 65433 222334678999999999988877778889999876 421
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEE-EecCCC
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTEPGE 335 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~-l~~h~~ 335 (360)
. ...+......+.++++.++|+.+++...++.|..||.. ++.... +.....
T Consensus 95 ~---------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~ 146 (300)
T 2qc5_A 95 T---------------------------EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS 146 (300)
T ss_dssp E---------------------------EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC
T ss_pred E---------------------------EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC
Confidence 1 01111233568899999999988877778899999987 655422 233456
Q ss_pred ceEEEEEcCCCCEEEccc
Q psy11015 336 AIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 336 ~v~~~~~~~~g~~las~~ 353 (360)
.+.+++++++|.+.++..
T Consensus 147 ~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTEN 164 (300)
T ss_dssp CEEEEEECTTSSEEEEET
T ss_pred CceeEEECCCCCEEEEec
Confidence 789999999998766553
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.58 E-value=1.1e-05 Score=72.01 Aligned_cols=142 Identities=16% Similarity=0.097 Sum_probs=92.1
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---C-CcCeEEEEEeeCCCEEEEEeCC----CcEEEEEc
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---H-SGSVNSVRFLPNKDLVLSASGD----KSVHIWQA 251 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~---h-~~~v~~i~~~p~~~~l~s~s~d----~~i~vwd~ 251 (360)
...+.+++|++++.++++. .+ .|.+||..+++....... . ...+++++++|+|+++++...+ +...||.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 4579999999999876654 44 599999988875433221 1 2358899999999977655422 23445544
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECC--CC-e--
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE--TG-T-- 325 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~--~~-~-- 325 (360)
.++. ...+..+......++|+|+|+.++.+ +.++.|.+||+. +| .
T Consensus 167 ~~g~-----------------------------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~ 217 (326)
T 2ghs_A 167 AKGK-----------------------------VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG 217 (326)
T ss_dssp ETTE-----------------------------EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS
T ss_pred eCCc-----------------------------EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc
Confidence 3331 11121222356789999999877554 457899999985 56 3
Q ss_pred ---EEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015 326 ---ILQSLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 326 ---~~~~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
.+..+.........++++++|.+.++.
T Consensus 218 ~~~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 218 KAEVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp CCEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred CceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 222333344567889999999876654
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.56 E-value=1.4e-06 Score=79.22 Aligned_cols=137 Identities=12% Similarity=0.121 Sum_probs=98.2
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEc
Q psy11015 187 AVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQA 251 (360)
Q Consensus 187 ~~~~~~~~l~sgs~-----Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~ 251 (360)
...|++..++.... ++.|.+.|..+++.+..+.....+ . +.++|+|++++.++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34678887777655 679999999999999998855555 4 99999999887765 3678999999
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CC------CCcEEEEEEcCCCCEEEEEEC--CCcEEEEECC
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GH------SNVVIAADWLSDGEQVITASW--DRVANLFDVE 322 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h------~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~ 322 (360)
.++... ..+. +. ......++|+|||++++.+.. ++.|.++|+.
T Consensus 117 ~t~~v~----------------------------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 117 VTLLPT----------------------------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp TTCCEE----------------------------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCCeEE----------------------------EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 877433 2221 10 123456899999999988874 6899999999
Q ss_pred CCeEEEEEecCCC-ce------EEEEEcCCCCEEEccc
Q psy11015 323 TGTILQSLTEPGE-AI------RAAAGRTGGPIRASPL 353 (360)
Q Consensus 323 ~~~~~~~l~~h~~-~v------~~~~~~~~g~~las~~ 353 (360)
+++.+.++..... .+ .-++.+++|.++.-..
T Consensus 169 t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 169 GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp TTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred CCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEEC
Confidence 9999988864321 01 1135677777665444
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=2.6e-06 Score=76.68 Aligned_cols=149 Identities=10% Similarity=-0.023 Sum_probs=98.5
Q ss_pred CCEEEEEECCCCCEEEEEe--CCCcEEEEECCCCeEEEEEe-------CCCcCeEEEEEeeCCCEEEEEeC-----CCcE
Q psy11015 181 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPNKDLVLSASG-----DKSV 246 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs--~Dg~v~iwd~~~~~~~~~~~-------~h~~~v~~i~~~p~~~~l~s~s~-----d~~i 246 (360)
..+..++++++|+++++.. .++.++||.+.+++. ..|. +|-..+..++++|+++++++... ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999888864 234356666555543 3332 24567999999999887766544 5789
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEE---CCCcEEEEECC
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITAS---WDRVANLFDVE 322 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs---~dg~i~iwd~~ 322 (360)
.+||+.++.....+... .....+...+..+++.|++..+ ++.+ .++.|.+||..
T Consensus 96 ~~~d~~tg~~~~~~~~~----------------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLP----------------------PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEETTTTEEEEEEECC----------------------TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EEEECCCCeEEEEEECC----------------------hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 99999877433221000 0001123456789999865555 5544 57899999999
Q ss_pred CCeEEEEEecCC-----------------------------CceEEEEEcCCCCEEEcc
Q psy11015 323 TGTILQSLTEPG-----------------------------EAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 323 ~~~~~~~l~~h~-----------------------------~~v~~~~~~~~g~~las~ 352 (360)
+++....+.+|. ..+..++|+|+|..+..+
T Consensus 154 ~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~ 212 (343)
T 2qe8_A 154 TGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS 212 (343)
T ss_dssp TCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE
T ss_pred CCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE
Confidence 887766554321 236889999999765543
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.56 E-value=3.3e-06 Score=74.43 Aligned_cols=142 Identities=8% Similarity=-0.022 Sum_probs=93.3
Q ss_pred CCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEE-EeC----CCcCeEEEEEeeCCCEEEEEeCC---------
Q psy11015 179 HRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQ-YSG----HSGSVNSVRFLPNKDLVLSASGD--------- 243 (360)
Q Consensus 179 h~~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~-~~~----h~~~v~~i~~~p~~~~l~s~s~d--------- 243 (360)
+...+.+++++++ +.++++. ..+.|.+||.. ++.... ... ....+.+++++|+|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 5567999999999 6545544 44578999998 765433 221 12358899999999888776655
Q ss_pred ------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc----CCCCEEEEE-EC
Q psy11015 244 ------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITA-SW 312 (360)
Q Consensus 244 ------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s----p~g~~l~tg-s~ 312 (360)
+.|..||.. +. ...+..+......++|+ |+|+.++.+ ..
T Consensus 147 ~~~~~~~~l~~~~~~-g~-----------------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQ-----------------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP 196 (314)
T ss_dssp TTSSSCEEEEEECTT-SC-----------------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred cccCCCCeEEEECCC-CC-----------------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECC
Confidence 345555543 21 11122233456789999 999766555 56
Q ss_pred CCcEEEEECC-CCeE-----EEEEecCC-CceEEEEEcCCCCEEEcc
Q psy11015 313 DRVANLFDVE-TGTI-----LQSLTEPG-EAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 313 dg~i~iwd~~-~~~~-----~~~l~~h~-~~v~~~~~~~~g~~las~ 352 (360)
++.|.+||.. ++.. ...+..+. ..+..++++++|++.++.
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 7899999976 4542 22333333 567899999999877764
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=4.1e-06 Score=73.99 Aligned_cols=151 Identities=12% Similarity=0.069 Sum_probs=97.2
Q ss_pred eeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe---CC-CcCeEEEEEeeCCCEEEE----EeC--
Q psy11015 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GH-SGSVNSVRFLPNKDLVLS----ASG-- 242 (360)
Q Consensus 173 ~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~---~h-~~~v~~i~~~p~~~~l~s----~s~-- 242 (360)
...+..+...+.+++++++|+++++...++.|.+|+.. ++...... +. ...+++++++|+|+++++ |..
T Consensus 78 ~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~ 156 (305)
T 3dr2_A 78 VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP 156 (305)
T ss_dssp EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG
T ss_pred EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc
Confidence 34555667789999999999877766667899999986 55332221 11 134678999999998886 332
Q ss_pred -----------CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE
Q psy11015 243 -----------DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 311 (360)
Q Consensus 243 -----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs 311 (360)
.+.|..||..++. +..+. .......++|+|+|+.|+.+.
T Consensus 157 ~~~~~~~~~~~~~~v~~~d~~~g~-----------------------------~~~~~-~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 157 SQGCPADPELAHHSVYRLPPDGSP-----------------------------LQRMA-DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp GGSCCCCCSSSCEEEEEECSSSCC-----------------------------CEEEE-EESSEEEEEECTTSSEEEEEE
T ss_pred ccccccccccCCCeEEEEcCCCCc-----------------------------EEEEe-cCCCCcceEEcCCCCEEEEEe
Confidence 2345555554441 11112 234567899999999887776
Q ss_pred CC------CcEEEEECCCCeEE--EEE-ecCCCceEEEEEcCCCCEEEcccc
Q psy11015 312 WD------RVANLFDVETGTIL--QSL-TEPGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 312 ~d------g~i~iwd~~~~~~~--~~l-~~h~~~v~~~~~~~~g~~las~~~ 354 (360)
.. +.|.+|++..+... ..+ .........++++++|++.++..+
T Consensus 207 ~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~ 258 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT 258 (305)
T ss_dssp CCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS
T ss_pred cCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC
Confidence 65 68999998765411 111 112334556888888887766643
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.47 E-value=1e-05 Score=73.83 Aligned_cols=119 Identities=8% Similarity=-0.065 Sum_probs=82.3
Q ss_pred CCCCCEEEEEeC--CC---cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEccc
Q psy11015 189 RPGQPVLGSASA--DR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVI 253 (360)
Q Consensus 189 ~~~~~~l~sgs~--Dg---~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~ 253 (360)
.|++..++.+.. .. +|.+||..+++.+..+.....+ .++|+|||+.++.+. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356666665543 22 8899999999988888754443 999999999988875 367899999876
Q ss_pred CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEE-E
Q psy11015 254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQS-L 330 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~-l 330 (360)
......+.. ....... +......++|+|+|++|++++. ++.|.++| .+++.+.. +
T Consensus 107 ~~~~~~i~~-------------------~~~~~~~--~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i 164 (373)
T 2mad_H 107 FLPIADIEL-------------------PDAPRFD--VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL 164 (373)
T ss_pred CcEEEEEEC-------------------CCccccc--cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc
Confidence 633321100 0000000 0123457899999999998874 47899999 99998877 5
Q ss_pred e
Q psy11015 331 T 331 (360)
Q Consensus 331 ~ 331 (360)
.
T Consensus 165 ~ 165 (373)
T 2mad_H 165 S 165 (373)
T ss_pred C
Confidence 4
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=2.9e-05 Score=71.44 Aligned_cols=172 Identities=13% Similarity=0.052 Sum_probs=108.6
Q ss_pred ccceeeeeeeecCC---CCEEEEEECCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEEeCC--C
Q psy11015 167 LLSCYKIRSFSGHR---DGVWDVAVRPGQPVLGSAS-------------------ADRTVRLWSTQTGKCVLQYSGH--S 222 (360)
Q Consensus 167 ~~~~~~~~~l~~h~---~~V~~l~~~~~~~~l~sgs-------------------~Dg~v~iwd~~~~~~~~~~~~h--~ 222 (360)
..+++.+.++.... .--+.+.|+|+++.+++.. .+.+|.+||+.+++.+.++.-- .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 35566666665222 2235678899999888884 4689999999999888888742 1
Q ss_pred cCeEEEEE--eeCCCEEEEEe------CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe------
Q psy11015 223 GSVNSVRF--LPNKDLVLSAS------GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL------ 288 (360)
Q Consensus 223 ~~v~~i~~--~p~~~~l~s~s------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 288 (360)
.....+.| +|++++++.++ .+++|.+|....+......... .........+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId---------------i~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE---------------IPAEPLEGNLPEILKP 315 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE---------------ECCEECCSSCCGGGGG
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe---------------CCCccccccccccccc
Confidence 34556666 99999877766 5678888776543211110000 0000000000
Q ss_pred -eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECC---CCeEEEEEecCC--------------CceEEEEEcCCCCEE
Q psy11015 289 -LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVE---TGTILQSLTEPG--------------EAIRAAAGRTGGPIR 349 (360)
Q Consensus 289 -~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~---~~~~~~~l~~h~--------------~~v~~~~~~~~g~~l 349 (360)
.+-......+.++|||++|+++.+ .+.|.+||+. +.+.+..+.... +.-..++++|+|+++
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence 000234678999999999988876 6889999985 345666554321 124789999999876
Q ss_pred Eccc
Q psy11015 350 ASPL 353 (360)
Q Consensus 350 as~~ 353 (360)
..+.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6554
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.39 E-value=1.8e-05 Score=73.17 Aligned_cols=185 Identities=8% Similarity=-0.071 Sum_probs=117.2
Q ss_pred CccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEE
Q psy11015 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV 228 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i 228 (360)
+..+.+.+.++..-..+ .++++|+++.++.+. .++.|.++|..+++.+..+.-- ......+
T Consensus 105 D~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~ 182 (426)
T 3c75_H 105 DGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMN 182 (426)
T ss_dssp ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGS
T ss_pred ECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceE
Confidence 34556667777655556 899999999777775 4679999999999988877521 1235678
Q ss_pred EEeeCCCEEEEEeC--CCcEEEEEcccCeeEeeeCCCCC---------------CCCC-----------------CCC--
Q psy11015 229 RFLPNKDLVLSASG--DKSVHIWQAVINWECLVSNNDND---------------SDLD-----------------ESK-- 272 (360)
Q Consensus 229 ~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~---------------~~~~-----------------~~~-- 272 (360)
.|+|||++++.+.. ++.|.+.|+.++.....+..... .... ...
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 99999999988874 57899999998766544433110 0000 000
Q ss_pred ----------CCCCCcc---ccccceeEeeCC-----------------------CCcEEEEEEcCCCCEEEEEEC----
Q psy11015 273 ----------EPDESSI---TLRTPVKELLGH-----------------------SNVVIAADWLSDGEQVITASW---- 312 (360)
Q Consensus 273 ----------~~~~~~~---~~~~~~~~~~~h-----------------------~~~v~~i~~sp~g~~l~tgs~---- 312 (360)
....... .....+..+... ......++++|+++++++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 0000000 000000111000 001112688999888766542
Q ss_pred ------CCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCC-EEEccc
Q psy11015 313 ------DRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP-IRASPL 353 (360)
Q Consensus 313 ------dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~-~las~~ 353 (360)
++.|.++|..+++.+.++... ....+++|+|+|+ .++++.
T Consensus 343 gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEE
T ss_pred ccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEc
Confidence 357999999999999998643 3578999999998 666654
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.34 E-value=6.4e-08 Score=88.40 Aligned_cols=66 Identities=17% Similarity=0.065 Sum_probs=46.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258 (360)
Q Consensus 191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~ 258 (360)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+.+++..+++++.|+.+..||..++....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee
Confidence 366899999999999999999999988886 556666666678788888899999999998875543
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.34 E-value=8.8e-09 Score=94.13 Aligned_cols=129 Identities=9% Similarity=0.027 Sum_probs=66.6
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC-eE-EEEEeeCCCEEEEEeCCCc
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-VN-SVRFLPNKDLVLSASGDKS 245 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~-v~-~i~~~p~~~~l~s~s~d~~ 245 (360)
.+++.+-.+.. +.+.+..+..++..+++++.||.|+.||..+|+.+..+..+... +. +..+. .+..+++|+.|+.
T Consensus 27 ~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~ 103 (369)
T 2hz6_A 27 RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDI 103 (369)
T ss_dssp TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEE
T ss_pred CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCE
Confidence 45555555554 45555555667778888899999999999999887777544221 10 11111 3456778888999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~ 325 (360)
+..||..+|..... +..+. ...++|++..+++++.|+.|+.||..+|+
T Consensus 104 v~a~D~~tG~~~w~----------------------------~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 104 WYVIDLLTGEKQQT----------------------------LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp EEEECCC------------------------------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred EEEEECCCCcEEEE----------------------------ecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 99999998844322 21121 13345688899999999999999999998
Q ss_pred EEEEEe
Q psy11015 326 ILQSLT 331 (360)
Q Consensus 326 ~~~~l~ 331 (360)
.+..+.
T Consensus 152 ~~W~~~ 157 (369)
T 2hz6_A 152 LRWNAT 157 (369)
T ss_dssp CCCEEE
T ss_pred EEEeEe
Confidence 665543
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.33 E-value=8.6e-06 Score=73.94 Aligned_cols=87 Identities=9% Similarity=-0.130 Sum_probs=67.4
Q ss_pred cCccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEE
Q psy11015 165 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNS 227 (360)
Q Consensus 165 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~ 227 (360)
.+..+++.+.++..-..+ .+.++|++..++.+. .+++|.+||+.+++.+..+... ......
T Consensus 51 ID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ 128 (368)
T 1mda_H 51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI 128 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS
T ss_pred EECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcce
Confidence 345566777777655556 799999999888776 3789999999999999988633 124568
Q ss_pred EEEeeCCCEEEEEeC--CCcEEE--EEccc
Q psy11015 228 VRFLPNKDLVLSASG--DKSVHI--WQAVI 253 (360)
Q Consensus 228 i~~~p~~~~l~s~s~--d~~i~v--wd~~~ 253 (360)
+.|+|||++++.+.. +..+.+ +|..+
T Consensus 129 ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 129 IGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 999999999888875 356888 88865
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.30 E-value=1.2e-05 Score=74.42 Aligned_cols=132 Identities=11% Similarity=0.060 Sum_probs=92.6
Q ss_pred CCCCEEEEEeC-C----CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEcccC
Q psy11015 190 PGQPVLGSASA-D----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVIN 254 (360)
Q Consensus 190 ~~~~~l~sgs~-D----g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~~ 254 (360)
+++..++.+.. + ++|.++|..+++.+..+..-..+ .+.++|||+.++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 34454444433 3 69999999999999998754444 899999999887775 4678999999877
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-C------CCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCe
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-G------HSNVVIAADWLSDGEQVITASW--DRVANLFDVETGT 325 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~ 325 (360)
.... .+. + .......+.|+|||++++++.. ++.|.+.|+.+++
T Consensus 160 ~vv~----------------------------~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 160 LPIA----------------------------DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp CEEE----------------------------EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred cEEE----------------------------EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 4332 221 1 0122346889999999998875 5789999999999
Q ss_pred EEEEEecCCC-------ceEEEEEcCCCCEEEc
Q psy11015 326 ILQSLTEPGE-------AIRAAAGRTGGPIRAS 351 (360)
Q Consensus 326 ~~~~l~~h~~-------~v~~~~~~~~g~~las 351 (360)
.+.++..... .-.-++++++|.++.-
T Consensus 212 vv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 212 FDRMLDVPDCYHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp EEEEEECCSEEEEEEEETTEEEEEETTSSEEEE
T ss_pred EEEEEEcCCceeeccCCCcEEEEEcCCCCEEEE
Confidence 9888865321 1112566777775543
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.29 E-value=1.2e-05 Score=73.20 Aligned_cols=128 Identities=12% Similarity=-0.084 Sum_probs=88.8
Q ss_pred CccceeeeeeeecCCCCEEEEEECCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEeCC-------CcCeEEE
Q psy11015 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV 228 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs----------~Dg~v~iwd~~~~~~~~~~~~h-------~~~v~~i 228 (360)
+..+++.+.++..-..+ . ++++|+++.++.++ .++.|.+||..+++.+..+.-. ......+
T Consensus 65 D~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~ 142 (386)
T 3sjl_D 65 DGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT 142 (386)
T ss_dssp ETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred ECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceE
Confidence 34566677777655555 4 99999999777765 3678999999999988887521 1245679
Q ss_pred EEeeCCCEEEEEeC--CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCE
Q psy11015 229 RFLPNKDLVLSASG--DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQ 306 (360)
Q Consensus 229 ~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~ 306 (360)
.|+|||++++.+.. ++.|.++|+.++... .++..- + . ...+....+.
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv----------------------------~tI~v~-g-~-~~~~P~g~~~ 191 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK----------------------------RMLDVP-D-C-YHIFPTAPDT 191 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEE----------------------------EEEECC-S-E-EEEEEEETTE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEE----------------------------EEEECC-C-c-ceeecCCCce
Confidence 99999999888764 689999999887433 222211 1 1 1223334566
Q ss_pred EEEEECCCcEEEEECCC-CeE
Q psy11015 307 VITASWDRVANLFDVET-GTI 326 (360)
Q Consensus 307 l~tgs~dg~i~iwd~~~-~~~ 326 (360)
+++.+.||.+.+.++.+ ++.
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCC
T ss_pred eEEECCCCCEEEEECCCCCeE
Confidence 77788888888888865 554
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.27 E-value=2.4e-05 Score=77.40 Aligned_cols=139 Identities=11% Similarity=0.081 Sum_probs=92.5
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEECCCCeE--EEEEe--C-CCcCeEEEEEeeCCCEEEEEeC---
Q psy11015 184 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGKC--VLQYS--G-HSGSVNSVRFLPNKDLVLSASG--- 242 (360)
Q Consensus 184 ~~l~~~~~~~~l~sgs~Dg~-------------v~iwd~~~~~~--~~~~~--~-h~~~v~~i~~~p~~~~l~s~s~--- 242 (360)
..++|+ |++.|+.++.+.. |++|++.++.. ...+. . |...+.++.|+|||++++..+.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 9998888888744 99999987642 33333 3 4456789999999997754332
Q ss_pred -CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC---CcEE
Q psy11015 243 -DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD---RVAN 317 (360)
Q Consensus 243 -d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d---g~i~ 317 (360)
+..+.+||+.++. .....+..+....... |+++|..|+..+ .+ +.|.
T Consensus 257 ~~~~i~~~d~~~~~---------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~ 308 (693)
T 3iuj_A 257 SGNRLYVKDLSQEN---------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLV 308 (693)
T ss_dssp SCCEEEEEETTSTT---------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred CCcEEEEEECCCCC---------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence 2478999986541 1234455565555554 666777665444 33 6799
Q ss_pred EEECCCCeE--EEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 318 LFDVETGTI--LQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 318 iwd~~~~~~--~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
.||+.++.. ...+..|...+. .|++++..++...
T Consensus 309 ~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 309 TVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp EEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred EEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 999987654 345666666665 8888887666444
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.23 E-value=0.00046 Score=58.89 Aligned_cols=181 Identities=14% Similarity=0.091 Sum_probs=109.0
Q ss_pred ceeeeeeeecCCCC--EEEEEECCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CC
Q psy11015 169 SCYKIRSFSGHRDG--VWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD 243 (360)
Q Consensus 169 ~~~~~~~l~~h~~~--V~~l~~~~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d 243 (360)
..+.++++ .|... ...+.|+ ++.++.+++.+| .|+++|+.+++.+..+.-. .........++++.++... .+
T Consensus 30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeC
Confidence 34566666 44433 4788898 667778888776 8999999999988887643 3333322333455555544 58
Q ss_pred CcEEEEEcccCeeEeeeCCCCCCCCCCCC------CCCCCc-----cccccceeEeeC--CC---CcEEEEEEcCCCCEE
Q psy11015 244 KSVHIWQAVINWECLVSNNDNDSDLDESK------EPDESS-----ITLRTPVKELLG--HS---NVVIAADWLSDGEQV 307 (360)
Q Consensus 244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~~--h~---~~v~~i~~sp~g~~l 307 (360)
+.+.+||..+......+............ +..... ......+..+.. .. ..++.+.|. +|...
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred CEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 89999999988777665543211111100 100110 111122222221 11 234557776 66544
Q ss_pred EEEECCCcEEEEECCCCeEEEEEecC------------CCceEEEEEcCCCC-EEEccc
Q psy11015 308 ITASWDRVANLFDVETGTILQSLTEP------------GEAIRAAAGRTGGP-IRASPL 353 (360)
Q Consensus 308 ~tgs~dg~i~iwd~~~~~~~~~l~~h------------~~~v~~~~~~~~g~-~las~~ 353 (360)
+..-.+..|.+.|..+|+.+..+... ..-.+.+||+|++. +++|+-
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 44445789999999999999888642 13568999999765 555653
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.20 E-value=0.00017 Score=62.15 Aligned_cols=151 Identities=13% Similarity=0.026 Sum_probs=97.9
Q ss_pred ceeeeeeeecCCC--CEEEEEECCCCCEEEEEeC--CCcEEEEECCCCeEEEEEeC-CCcCeEEEEEeeCCCEE-EEEeC
Q psy11015 169 SCYKIRSFSGHRD--GVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLV-LSASG 242 (360)
Q Consensus 169 ~~~~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~--Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p~~~~l-~s~s~ 242 (360)
+.+.+.++ .|.. ....+.|++++.++++.+. ++.|+++|+.+++.+..+.- .......+++. +..+ ++.-.
T Consensus 8 ~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 8 IVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 34556666 3443 3679999998755555543 57999999999998888752 22233455554 4445 44456
Q ss_pred CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
++.+.++|..+.... .++...... ...++++|+.++++..++.|.++|..
T Consensus 85 ~~~v~viD~~t~~v~----------------------------~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNI----------------------------KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp CSEEEEEETTTTEEE----------------------------EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTT
T ss_pred CCEEEEEECCCCcEE----------------------------EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECC
Confidence 789999998876332 333211111 12345588877777778999999999
Q ss_pred CCeEEEEEecCC--C---ceEEEEEcCCCCEEEccc
Q psy11015 323 TGTILQSLTEPG--E---AIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 323 ~~~~~~~l~~h~--~---~v~~~~~~~~g~~las~~ 353 (360)
+.+.+..+.... . .++.+.|. +|.+.++..
T Consensus 135 t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 135 TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 998888776321 1 36677887 676655543
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.16 E-value=3.4e-05 Score=76.03 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=87.7
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----------cCe------------------------EEEEEeeCCCEE
Q psy11015 193 PVLGSASADRTVRLWSTQTGKCVLQYSGHS-----------GSV------------------------NSVRFLPNKDLV 237 (360)
Q Consensus 193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----------~~v------------------------~~i~~~p~~~~l 237 (360)
..++.++.+|.+.++|..+|+.+..+.... ..+ ..++|+|++.++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 689999999999999999999887765221 011 146888888888
Q ss_pred EEEeCC-------------------------------------------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCC
Q psy11015 238 LSASGD-------------------------------------------KSVHIWQAVINWECLVSNNDNDSDLDESKEP 274 (360)
Q Consensus 238 ~s~s~d-------------------------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
++...+ +.|..||+.+++....
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~--------------- 472 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS--------------- 472 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE---------------
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee---------------
Confidence 776543 5566677666643322
Q ss_pred CCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCC-CceEEEEEcCCCCEEE
Q psy11015 275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG-EAIRAAAGRTGGPIRA 350 (360)
Q Consensus 275 ~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~-~~v~~~~~~~~g~~la 350 (360)
.. +...+.+..+...+..+++|+.||.+++||..+|+.+..+.... ....-+.|..+|...+
T Consensus 473 -------------~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 473 -------------VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp -------------EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred -------------cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 11 11223334455678889999999999999999999999987543 2223456667776433
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.09 E-value=0.00031 Score=60.47 Aligned_cols=157 Identities=7% Similarity=-0.024 Sum_probs=99.0
Q ss_pred cceeeeeeeec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015 168 LSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246 (360)
Q Consensus 168 ~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i 246 (360)
.+++.+.++.- .......+++.. +.+.++.-.++.+.++|..+.+.+..+..-.+. ...++++|..++.+..++++
T Consensus 52 ~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l 128 (266)
T 2iwa_A 52 QTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSIL 128 (266)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEE
T ss_pred CCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeE
Confidence 34455555431 112223455553 334555556889999999999999988632122 23355688777777788999
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-C-CCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
.++|..+...... +..-. + .-..++.+.|. +|...+....++.|.+.|..++
T Consensus 129 ~viD~~t~~v~~~-------------------------I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 129 YEIDPHTFKLIKK-------------------------HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp EEECTTTCCEEEE-------------------------EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred EEEECCCCcEEEE-------------------------EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence 9999877633321 11000 1 11246778888 6744444445789999999999
Q ss_pred eEEEEEecCC-------------CceEEEEEcCCCC-EEEccc
Q psy11015 325 TILQSLTEPG-------------EAIRAAAGRTGGP-IRASPL 353 (360)
Q Consensus 325 ~~~~~l~~h~-------------~~v~~~~~~~~g~-~las~~ 353 (360)
+.+..+.... .....++|+|++. +++|+.
T Consensus 183 ~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 183 TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 9998886321 3568999999875 555543
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.07 E-value=8.3e-05 Score=73.39 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=39.2
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC-ceEEEEEcCCCC-EEE
Q psy11015 299 DWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE-AIRAAAGRTGGP-IRA 350 (360)
Q Consensus 299 ~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~-~v~~~~~~~~g~-~la 350 (360)
.+...+..+++|+.||.++.||.++|+.+..+..+.+ ...-+.|..+|. +++
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 4455788999999999999999999999988875432 224466777776 444
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.02 E-value=0.00011 Score=64.90 Aligned_cols=181 Identities=9% Similarity=-0.038 Sum_probs=104.8
Q ss_pred eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
+.....+..+...+.++...+++. +..|+.++.+..||.. ++.+..+......+.++.+.+++.+++ ++ +.+..|
T Consensus 126 g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~ 200 (330)
T 3hxj_A 126 GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAI 200 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEE
T ss_pred CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEE
Confidence 344445555555566777777775 6668888999999998 887777776666677788877777554 44 778899
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCC--CCccccccceeEe----------eCCCCcEEEEEEcCCCCEEEEEECCCcEE
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPD--ESSITLRTPVKEL----------LGHSNVVIAADWLSDGEQVITASWDRVAN 317 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~h~~~v~~i~~sp~g~~l~tgs~dg~i~ 317 (360)
| .++..................... .+......-+..+ ......+.++.+. .+..|..++.+|.|.
T Consensus 201 d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~-~~g~l~v~t~~ggl~ 278 (330)
T 3hxj_A 201 N-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIG-NTDTIYFGSYDGHLY 278 (330)
T ss_dssp C-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEEC-TTSCEEEECTTCEEE
T ss_pred C-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEc-CCCeEEEecCCCCEE
Confidence 8 666555443322111111111100 0000001111222 1111122223332 244777777777777
Q ss_pred EEECCCCeEEEEEecCCCceEEEEEcCCCCEEEcccccchh
Q psy11015 318 LFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIR 358 (360)
Q Consensus 318 iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las~~~~~ir 358 (360)
.+| .+++.+..+......+.++...++|.+.+++.++.++
T Consensus 279 ~~d-~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~ 318 (330)
T 3hxj_A 279 AIN-PDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFY 318 (330)
T ss_dssp EEC-TTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEE
T ss_pred EEC-CCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEE
Confidence 777 7777777776666667777777777777777666543
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.01 E-value=8.9e-05 Score=65.57 Aligned_cols=84 Identities=10% Similarity=-0.048 Sum_probs=57.1
Q ss_pred eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
+..+..+..+...+.++.+.+++.+.+ ++ +.+..|| .+++.+..+......+.++...++|. +..++.++.+..+
T Consensus 166 g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 166 GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAI 240 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEE
Confidence 445555555556677778877776444 44 8899999 77877777766666788888887775 5556777778888
Q ss_pred EcccCeeEee
Q psy11015 250 QAVINWECLV 259 (360)
Q Consensus 250 d~~~~~~~~~ 259 (360)
|. ++.....
T Consensus 241 ~~-~g~~~~~ 249 (330)
T 3hxj_A 241 NP-DGTEKWR 249 (330)
T ss_dssp CT-TSCEEEE
T ss_pred CC-CCCEeEE
Confidence 74 4444433
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.95 E-value=0.0017 Score=55.64 Aligned_cols=136 Identities=8% Similarity=-0.101 Sum_probs=87.5
Q ss_pred CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCE-EEEEeCCCcEEEEEcccCeeEee
Q psy11015 182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLV 259 (360)
Q Consensus 182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~-l~s~s~d~~i~vwd~~~~~~~~~ 259 (360)
.+.+++|++++. ++++-...+.|.+++...+.....+.........++++|++.. +++....+.|.++++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---- 112 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---- 112 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC----
Confidence 567899999655 4555556789999999766544444333356899999997554 4555567789999875321
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCCeEEEEEe-cCC
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW---DRVANLFDVETGTILQSLT-EPG 334 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~~~~~~l~-~h~ 334 (360)
...+ .........++++|++..|+.+.. .+.|..+++.. .....+. ..-
T Consensus 113 -------------------------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~ 166 (267)
T 1npe_A 113 -------------------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNL 166 (267)
T ss_dssp -------------------------CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTC
T ss_pred -------------------------EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCC
Confidence 1111 111245688999997666655554 36788888753 3333332 233
Q ss_pred CceEEEEEcCCCC
Q psy11015 335 EAIRAAAGRTGGP 347 (360)
Q Consensus 335 ~~v~~~~~~~~g~ 347 (360)
.....+++++++.
T Consensus 167 ~~P~gia~d~~~~ 179 (267)
T 1npe_A 167 GLPNGLTFDAFSS 179 (267)
T ss_dssp SCEEEEEEETTTT
T ss_pred CCCcEEEEcCCCC
Confidence 4578899999764
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.95 E-value=0.0017 Score=54.85 Aligned_cols=155 Identities=6% Similarity=0.025 Sum_probs=97.0
Q ss_pred cceeeeeeeecCCCC-EEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015 168 LSCYKIRSFSGHRDG-VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~-V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i 246 (360)
.+++.++.+.-.... --.+++.. +.+....-.++.+.+||..+.+.+.++.. .+.-+.++ +++..|+.+..++.|
T Consensus 51 ~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l 126 (243)
T 3mbr_X 51 ETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRARFRY-PGEGWALT--SDDSHLYMSDGTAVI 126 (243)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEE
T ss_pred CCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEEEeC-CCCceEEe--eCCCEEEEECCCCeE
Confidence 344555544322211 12334432 33455556788999999999999999873 33334554 477777777778999
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQVITASWDRVANLFDVET 323 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~ 323 (360)
.++|..+...... +. ...+. ..++.+.|. +|+..+..-.+..|.+.|..+
T Consensus 127 ~~iDp~t~~~~~~-------------------------I~-V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 127 RKLDPDTLQQVGS-------------------------IK-VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EEECTTTCCEEEE-------------------------EE-CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred EEEeCCCCeEEEE-------------------------EE-EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 9999887643321 11 11111 245667765 565444443578899999999
Q ss_pred CeEEEEEecC-------------CCceEEEEEcCCC-CEEEccc
Q psy11015 324 GTILQSLTEP-------------GEAIRAAAGRTGG-PIRASPL 353 (360)
Q Consensus 324 ~~~~~~l~~h-------------~~~v~~~~~~~~g-~~las~~ 353 (360)
|+.+..+.-. ..-.+.+|++|++ ++++|+-
T Consensus 180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9999887622 1356899999965 5666654
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.94 E-value=5e-05 Score=75.83 Aligned_cols=142 Identities=11% Similarity=0.055 Sum_probs=86.5
Q ss_pred CEEEEEEC-CCCCEEEEEe-CCC----cEEEEECCCC-eEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEE
Q psy11015 182 GVWDVAVR-PGQPVLGSAS-ADR----TVRLWSTQTG-KCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHI 248 (360)
Q Consensus 182 ~V~~l~~~-~~~~~l~sgs-~Dg----~v~iwd~~~~-~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~v 248 (360)
.+...+|+ |||+.|+-+. .+| +|+++|+.++ +.+. .+. .....+.|+|||+.|+....|. .|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67888999 9999776543 333 5999999988 6321 111 1134688999998777766552 4666
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC---CCcEEEEECCCC
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW---DRVANLFDVETG 324 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~---dg~i~iwd~~~~ 324 (360)
+++.++.. .....+. .+.....++.|+|||++|+..+. ...|.++|+.++
T Consensus 252 ~~lgt~~~--------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQS--------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGG--------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCch--------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 66654411 0111111 22345668899999999876553 345888898765
Q ss_pred --eE-EEEE-ecCCCceEEEEEcCCCCEEEcc
Q psy11015 325 --TI-LQSL-TEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 325 --~~-~~~l-~~h~~~v~~~~~~~~g~~las~ 352 (360)
.. +..+ ........++.|+.++.+++.+
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t 337 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILT 337 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEETTTEEEEEE
T ss_pred CCCceeEEeecCCCCceEEEeeeeCCEEEEEe
Confidence 22 1333 2344556666666555554443
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.93 E-value=0.0015 Score=55.67 Aligned_cols=158 Identities=12% Similarity=-0.020 Sum_probs=101.0
Q ss_pred CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCc
Q psy11015 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~ 245 (360)
+..+++.++.+-+..-.--.+++..+ .+....-.++.+.+||..+.+.+.++.. .+.-+.++ +++..|+.+..++.
T Consensus 81 D~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~ 156 (268)
T 3nok_A 81 SLESAQPVWMERLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTM 156 (268)
T ss_dssp CSSCSSCSEEEECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCEE--EETTEEEEECSSSE
T ss_pred ECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEEe--cCCCEEEEECCCCE
Confidence 34455555554111111233555432 3555566789999999999999999874 33334555 47788877778999
Q ss_pred EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCC---CcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 246 VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 246 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
|.++|..+...... +. ...+. ..++.+.|. +|...+..-.+..|.+.|..
T Consensus 157 l~~iDp~T~~v~~~-------------------------I~-V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 157 LTFHEPDGFALVGA-------------------------VQ-VKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp EEEECTTTCCEEEE-------------------------EE-CEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred EEEEcCCCCeEEEE-------------------------EE-eCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 99999887643322 11 11111 245677777 67544444457899999999
Q ss_pred CCeEEEEEecC-------------CCceEEEEEcCCC-CEEEcccc
Q psy11015 323 TGTILQSLTEP-------------GEAIRAAAGRTGG-PIRASPLL 354 (360)
Q Consensus 323 ~~~~~~~l~~h-------------~~~v~~~~~~~~g-~~las~~~ 354 (360)
+|+.+..+.-. ..-.+.+||+|++ ++++|+-.
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 99998887632 1356899999964 57777643
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.92 E-value=0.00022 Score=65.68 Aligned_cols=133 Identities=11% Similarity=0.108 Sum_probs=91.5
Q ss_pred CCCC-EEEEEeCCCcEEEEECCCC----eEEEEEe-------CCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEc
Q psy11015 190 PGQP-VLGSASADRTVRLWSTQTG----KCVLQYS-------GHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQA 251 (360)
Q Consensus 190 ~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~-------~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~ 251 (360)
++++ ++++|-.++.|.|+|+.+. +...++. ........+...|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6666 4555667889999999765 6666663 111245678888999 77776665 78999998
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee--CCC-CcEEEEEEcCCCCEEEEEEC----------------
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHS-NVVIAADWLSDGEQVITASW---------------- 312 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~-~~v~~i~~sp~g~~l~tgs~---------------- 312 (360)
.+.... .+.. +.. ..-..+-|+|+++.+++..+
T Consensus 172 ~T~~v~----------------------------~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 172 YSFEPL----------------------------GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp TTCCEE----------------------------EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred CCCeEE----------------------------EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 876433 2222 111 12235778999999998863
Q ss_pred ---CCcEEEEECCCCeEEEEEecC-C-CceEEEEE--cCCCCEEEc
Q psy11015 313 ---DRVANLFDVETGTILQSLTEP-G-EAIRAAAG--RTGGPIRAS 351 (360)
Q Consensus 313 ---dg~i~iwd~~~~~~~~~l~~h-~-~~v~~~~~--~~~g~~las 351 (360)
+.+|.+||+.+++.+.++... . .....+.| +|+|+++..
T Consensus 224 ~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 224 DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 689999999999988888753 1 23445555 999986543
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.90 E-value=0.002 Score=54.33 Aligned_cols=147 Identities=11% Similarity=0.015 Sum_probs=93.8
Q ss_pred eeeeeeeecCCC--CEEEEEECCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCc-CeEEEEEeeCCCEE-EEEeCC
Q psy11015 170 CYKIRSFSGHRD--GVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLV-LSASGD 243 (360)
Q Consensus 170 ~~~~~~l~~h~~--~V~~l~~~~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~~~h~~-~v~~i~~~p~~~~l-~s~s~d 243 (360)
.+.++++ .|.. -...+.|++ +.++.+.+.+| .|+++|+.+++.+..+.-... .-..+++ .++.+ ...-.+
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~ 84 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRN 84 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSS
T ss_pred eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeC
Confidence 4556666 5543 466899987 55777777764 899999999998888763222 1233444 34444 444568
Q ss_pred CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCC
Q psy11015 244 KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323 (360)
Q Consensus 244 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~ 323 (360)
+.+.+||..+... +.++.... .=+.++ +++..|+.+..++.|.++|..+
T Consensus 85 ~~v~v~D~~tl~~----------------------------~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 85 HEGFVYDLATLTP----------------------------RARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp SEEEEEETTTTEE----------------------------EEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTT
T ss_pred CEEEEEECCcCcE----------------------------EEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCC
Confidence 8999999987643 33333211 113444 4677777777789999999999
Q ss_pred CeEEEEEecCC-----CceEEEEEcCCCCEEEcc
Q psy11015 324 GTILQSLTEPG-----EAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 324 ~~~~~~l~~h~-----~~v~~~~~~~~g~~las~ 352 (360)
.+.+.++.... ..++.+.|. +|.+.|..
T Consensus 134 ~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 134 LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred CeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 98888775421 234555555 55555443
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.90 E-value=0.00058 Score=58.29 Aligned_cols=147 Identities=10% Similarity=0.025 Sum_probs=95.2
Q ss_pred eeeeeeecCC--CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCCCcEE
Q psy11015 171 YKIRSFSGHR--DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKSVH 247 (360)
Q Consensus 171 ~~~~~l~~h~--~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~ 247 (360)
+.+.++ .|. .-...+.|+. +.++.+.+.+|.|+++|+.+++.+..+-+....-..+++ +++.| +..-.++.+.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESSSCEEE
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEccCCEEE
Confidence 455566 343 3347888874 568888889999999999999877776211112233555 44444 4445688999
Q ss_pred EEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEE
Q psy11015 248 IWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 327 (360)
Q Consensus 248 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~ 327 (360)
+||..+.... .++..- ..-+.++ +++..|+.+..++.|.++|..+.+.+
T Consensus 120 V~D~~Tl~~~----------------------------~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 120 TWSGMPPQRE----------------------------RTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALV 168 (268)
T ss_dssp EEETTTTEEE----------------------------EEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEE
T ss_pred EEECCcCcEE----------------------------EEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEE
Confidence 9999877433 333311 1113444 47888887777899999999999988
Q ss_pred EEEecC--CC---ceEEEEEcCCCCEEEccc
Q psy11015 328 QSLTEP--GE---AIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 328 ~~l~~h--~~---~v~~~~~~~~g~~las~~ 353 (360)
.++... .. .++.+.|. +|.+.|..+
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw 198 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECA-NGVIYANIW 198 (268)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EEEEeCCCCcccccccccEEe-CCEEEEEEC
Confidence 877542 22 34566776 666665543
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.90 E-value=5.8e-05 Score=71.83 Aligned_cols=153 Identities=10% Similarity=-0.032 Sum_probs=99.5
Q ss_pred EEEEECCCCCEEEEEeCCC--------------------------------------cEEEEECCC--CeE-EEEEeCCC
Q psy11015 184 WDVAVRPGQPVLGSASADR--------------------------------------TVRLWSTQT--GKC-VLQYSGHS 222 (360)
Q Consensus 184 ~~l~~~~~~~~l~sgs~Dg--------------------------------------~v~iwd~~~--~~~-~~~~~~h~ 222 (360)
..++++|+|.++++.+.+. .|.|.|..+ +.. +..+. -.
T Consensus 198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg 276 (595)
T 1fwx_A 198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IA 276 (595)
T ss_dssp CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EE
T ss_pred cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cC
Confidence 4567899999888888653 466777776 444 44444 22
Q ss_pred cCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 223 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 223 ~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
....++.++|||+++++++ .+.+|.++|+.+........ ............ -......++|+
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~----------------l~~~~~v~~~v~-vG~gP~h~aF~ 339 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN----------------ADPRSAVVAEPE-LGLGPLHTAFD 339 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC----------------CCGGGGEEECCB-CCSCEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc----------------cCcccceEEEcC-CCCCcceEEEC
Confidence 3567899999999776654 68899999998542110000 000001122222 23467899999
Q ss_pred CCCCEEE-EEECCCcEEEEECCC----------CeEEEEEecCCCce-E----EEEEcCCCCEEEccccc
Q psy11015 302 SDGEQVI-TASWDRVANLFDVET----------GTILQSLTEPGEAI-R----AAAGRTGGPIRASPLLL 355 (360)
Q Consensus 302 p~g~~l~-tgs~dg~i~iwd~~~----------~~~~~~l~~h~~~v-~----~~~~~~~g~~las~~~~ 355 (360)
|+| +++ +.-.|+.|.+||+.+ .+.+..+..|-.+- . ++..+|+|+++.++...
T Consensus 340 ~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 340 GRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp TTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 999 554 556799999999877 56778887765432 1 22458999999887643
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.74 E-value=8.2e-05 Score=67.48 Aligned_cols=105 Identities=11% Similarity=-0.109 Sum_probs=76.2
Q ss_pred EEEEEeCCC----cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe----------CCCcEEEEEcccCeeEee
Q psy11015 194 VLGSASADR----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVINWECLV 259 (360)
Q Consensus 194 ~l~sgs~Dg----~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s----------~d~~i~vwd~~~~~~~~~ 259 (360)
.+++...++ +|.+.|..+++.+..+.....+ .+.++|+++.++.+. .+++|.+||+.++...
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv-- 109 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI-- 109 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE--
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE--
Confidence 444444444 8889999999999998755555 799999999888876 3688999999887433
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEeeCC-------CCcEEEEEEcCCCCEEEEEEC--CCcEEE--EECCCCeEEE
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANL--FDVETGTILQ 328 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~i~~sp~g~~l~tgs~--dg~i~i--wd~~~~~~~~ 328 (360)
.++..+ ......++++|||++++++.. +..+.+ +|..+ +.
T Consensus 110 --------------------------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~ 160 (368)
T 1mda_H 110 --------------------------ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQ 160 (368)
T ss_dssp --------------------------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EE
T ss_pred --------------------------EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ce
Confidence 333211 123456899999999998875 356888 99877 44
Q ss_pred EEe
Q psy11015 329 SLT 331 (360)
Q Consensus 329 ~l~ 331 (360)
++.
T Consensus 161 ~i~ 163 (368)
T 1mda_H 161 LTK 163 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.67 E-value=0.012 Score=50.21 Aligned_cols=135 Identities=9% Similarity=-0.009 Sum_probs=86.7
Q ss_pred CCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCeEEEEE-eCCCcCeEEEEEeeCCCEE-EEEeCCCcEEEEEcccCe
Q psy11015 181 DGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINW 255 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~---Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p~~~~l-~s~s~d~~i~vwd~~~~~ 255 (360)
.....++++|++..|+.+.. .+.|..++++... ...+ .........++++|++..| ++-...+.|.++|+....
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 46789999996555554443 3688888876432 2223 2333568899999987655 555566889999986431
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPG 334 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~ 334 (360)
.. ..+.+ .....+++. ++..++.+. .++.|..+|..+++.+..+....
T Consensus 201 ~~----------------------------~~~~~-~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~ 249 (267)
T 1npe_A 201 RR----------------------------KVLEG-LQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK 249 (267)
T ss_dssp EE----------------------------EEEEC-CCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTEEEEEECCSS
T ss_pred eE----------------------------EEecC-CCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCCceEEEcccc
Confidence 11 11111 123456665 355665555 45899999999999988886443
Q ss_pred -CceEEEEEcCCCC
Q psy11015 335 -EAIRAAAGRTGGP 347 (360)
Q Consensus 335 -~~v~~~~~~~~g~ 347 (360)
.....+++.|++.
T Consensus 250 ~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 250 QTRLYGITIALSQC 263 (267)
T ss_dssp CCCCCCEEEECSCC
T ss_pred ccccceeeecCccC
Confidence 2467788888764
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.67 E-value=0.0018 Score=63.90 Aligned_cols=76 Identities=11% Similarity=0.082 Sum_probs=57.3
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCCC-
Q psy11015 185 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD- 235 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~Dg~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~~- 235 (360)
.++++|+...++.++.++. |..||..+|+.+..++. |. ..+.......+|.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788898889999988764 99999999999988874 21 1222223333665
Q ss_pred --EEEEEeCCCcEEEEEcccCeeEeee
Q psy11015 236 --LVLSASGDKSVHIWQAVINWECLVS 260 (360)
Q Consensus 236 --~l~s~s~d~~i~vwd~~~~~~~~~~ 260 (360)
.++.++.+|.++++|..+|......
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccc
Confidence 7888999999999999999876543
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.62 E-value=0.0012 Score=59.79 Aligned_cols=133 Identities=8% Similarity=0.066 Sum_probs=88.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCC
Q psy11015 192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDES 271 (360)
Q Consensus 192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 271 (360)
+..++.++.++.+..+|..+|+.+..... +....+.. ++..++.++.++.+..+|..++........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~--------- 305 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD--------- 305 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT---------
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc---------
Confidence 45788888899999999999988776652 33444444 466788888999999999998855433110
Q ss_pred CCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEcCCCCEEEc
Q psy11015 272 KEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~~~g~~las 351 (360)
.....+..... .+..|+.++.+|.+..+|..+|+.+.........+.+.....++.+++.
T Consensus 306 ------------------~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~ 365 (376)
T 3q7m_A 306 ------------------LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQ 365 (376)
T ss_dssp ------------------TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEE
T ss_pred ------------------cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEE
Confidence 00111111222 2568888999999999999999988877654444433222236666666
Q ss_pred ccccch
Q psy11015 352 PLLLAI 357 (360)
Q Consensus 352 ~~~~~i 357 (360)
+.++.+
T Consensus 366 ~~~G~l 371 (376)
T 3q7m_A 366 AKDGTV 371 (376)
T ss_dssp BTTSCE
T ss_pred eCCCEE
Confidence 655543
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.60 E-value=0.0016 Score=64.16 Aligned_cols=77 Identities=9% Similarity=0.062 Sum_probs=58.4
Q ss_pred EEEECCCCCEEEEEeCCC-------------------cEEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCC--
Q psy11015 185 DVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNK-- 234 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~Dg-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~-- 234 (360)
.++++|++..++.++.++ +|..+|..+|+.+..++. |. ....-+....+|
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 568889888888887664 599999999999888774 21 122333444477
Q ss_pred -CEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015 235 -DLVLSASGDKSVHIWQAVINWECLVSN 261 (360)
Q Consensus 235 -~~l~s~s~d~~i~vwd~~~~~~~~~~~ 261 (360)
..++.++.+|.+.++|..+|.......
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEECCCCEEEEEECCCCCEecccc
Confidence 688999999999999999998776543
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.58 E-value=0.0029 Score=55.92 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=85.5
Q ss_pred CCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeC-----CCcCeEEEEEee-CCCEEEEEeC-----------
Q psy11015 181 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-----HSGSVNSVRFLP-NKDLVLSASG----------- 242 (360)
Q Consensus 181 ~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~-----h~~~v~~i~~~p-~~~~l~s~s~----------- 242 (360)
+.+.++++.+ ++ .|+.+...+.|..+|..++.. ..+.. .......+++.| +|++.++-..
T Consensus 80 ~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNN-QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTT-EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCC-cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 3578999998 55 455555555688888775532 22221 113478899999 8987776533
Q ss_pred ------CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEE-ECCCc
Q psy11015 243 ------DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRV 315 (360)
Q Consensus 243 ------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tg-s~dg~ 315 (360)
++.|..||..++.. ..+...-.....++|+|+|++|+.+ +.++.
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~-----------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~ 208 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKET-----------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQ 208 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEE-----------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTE
T ss_pred hcccCCCceEEEEeCCCCEE-----------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCe
Confidence 25677777654421 1111111234578999999977655 45688
Q ss_pred EEEEECCCCe--EEEEEecCCCceEEEEEcCCCCEEEccc
Q psy11015 316 ANLFDVETGT--ILQSLTEPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 316 i~iwd~~~~~--~~~~l~~h~~~v~~~~~~~~g~~las~~ 353 (360)
|.+|++.... ....+....+ ...++++++|++.++..
T Consensus 209 I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 209 IVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 9999987421 1112211223 67889999988666543
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.56 E-value=0.0036 Score=59.67 Aligned_cols=159 Identities=10% Similarity=0.040 Sum_probs=97.4
Q ss_pred CCEEEEEE-C-CCCCEEEEEe------------------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE
Q psy11015 181 DGVWDVAV-R-PGQPVLGSAS------------------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 181 ~~V~~l~~-~-~~~~~l~sgs------------------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~ 240 (360)
.....+++ + |++.+++.++ .++.+.+.|.++.+.+.++.-- +....++++|+|+++++.
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt 212 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFST 212 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEE
Confidence 35778887 5 8999888885 3467999999999888887632 245678899999999888
Q ss_pred eCCC---------------cEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccc--ccc-eeEeeCCCCcEEEEEEcC
Q psy11015 241 SGDK---------------SVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITL--RTP-VKELLGHSNVVIAADWLS 302 (360)
Q Consensus 241 s~d~---------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~h~~~v~~i~~sp 302 (360)
+.+. .+.+.|.......... . .......-....... ... +..+.. .....++.++|
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~---G--k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP 286 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA---G--DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP 286 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH---T--CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT
T ss_pred ecCcccCcchhhccccccceEEEeeccceeEeccC---C--CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcC
Confidence 8653 3666665432211000 0 000000000000000 111 222221 12345789999
Q ss_pred CCCEEEEEE-CCCcEEEEECCCCe------------EEEEEecCCCceEEEEEcCCCC
Q psy11015 303 DGEQVITAS-WDRVANLFDVETGT------------ILQSLTEPGEAIRAAAGRTGGP 347 (360)
Q Consensus 303 ~g~~l~tgs-~dg~i~iwd~~~~~------------~~~~l~~h~~~v~~~~~~~~g~ 347 (360)
||++++.++ .+.+|.++|+.+.+ .+..+. -......++|+|+|.
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGN 343 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSE
T ss_pred CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCe
Confidence 999876554 67899999998653 334443 345678999999994
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.0031 Score=58.41 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=85.8
Q ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CC----cEEEEEcccCe
Q psy11015 182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK----SVHIWQAVINW 255 (360)
Q Consensus 182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~----~i~vwd~~~~~ 255 (360)
....|+++| ++..|+.+...+.|+.+|+..+....... .......|+|+++|+.|+.+.. ++ .+.+++.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457889998 45566666655889999998776544443 4556899999999995555543 22 23333322110
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEEec-C
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTE-P 333 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h 333 (360)
.....+.. ......++++| +|..+++-..++.|..|+..++........ .
T Consensus 217 ---------------------------~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~ 268 (430)
T 3tc9_A 217 ---------------------------KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD 268 (430)
T ss_dssp ---------------------------CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred ---------------------------eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC
Confidence 00111111 22345788999 676666666778999999887764332222 2
Q ss_pred CCceEEEEEcCCCC
Q psy11015 334 GEAIRAAAGRTGGP 347 (360)
Q Consensus 334 ~~~v~~~~~~~~g~ 347 (360)
......++|+|+|+
T Consensus 269 ~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 269 SGWEFHIQFHPSGN 282 (430)
T ss_dssp SSCCEEEEECTTSS
T ss_pred CCcceeEEEcCCCC
Confidence 23467899999998
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.50 E-value=0.0029 Score=57.08 Aligned_cols=110 Identities=12% Similarity=0.021 Sum_probs=75.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---------cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015 192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHS---------GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN 262 (360)
Q Consensus 192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~---------~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 262 (360)
+..++.++.++.|..+|..+|+.+..+.... ..+.+. ...++..++.++.++.+..+|..++........
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5588888999999999999999887776421 222222 222456788889999999999998865543211
Q ss_pred CCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 263 DNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
.. .....++ . .+..++.++.+|.|..+|..+|+.+.....
T Consensus 132 ~~------------------------~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 132 AG------------------------EALSRPV----V--SDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp SS------------------------CCCSCCE----E--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CC------------------------ceEcCCE----E--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 00 0011111 1 245788888999999999999988776654
No 251
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.49 E-value=0.018 Score=49.12 Aligned_cols=158 Identities=8% Similarity=0.120 Sum_probs=99.2
Q ss_pred eeeecCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015 174 RSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251 (360)
Q Consensus 174 ~~l~~h~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~ 251 (360)
+.+.|-.+.+..++|+|++.. ++....++.|...|.. ++.+..+. +-......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 456676678999999998664 4457778899999988 88777764 22256889999988887777667788999987
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC---CCeEEE
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE---TGTILQ 328 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~---~~~~~~ 328 (360)
......... .....++. .........+++|.|.++.|+++.......+|.+. .+..+.
T Consensus 99 ~~~~~i~~~------------------~~~~~~~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 99 TPNSEVKIL------------------KKIKIPLQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp CTTCCEEEE------------------EEEECCCS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CCCCeeeee------------------eeeccccc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 654321100 00000000 01234567899999999888877766555555543 111222
Q ss_pred EEec-------CCCceEEEEEcCC-CCEEEc
Q psy11015 329 SLTE-------PGEAIRAAAGRTG-GPIRAS 351 (360)
Q Consensus 329 ~l~~-------h~~~v~~~~~~~~-g~~las 351 (360)
.+.. +-..+.+++++|. |.+++.
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 2211 2235678888885 444443
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.43 E-value=0.0033 Score=60.55 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=35.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCCEEEccc
Q psy11015 303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGPIRASPL 353 (360)
Q Consensus 303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~~las~~ 353 (360)
.+..++.++.||.|+.||.++|+.+..+...... -..+.+..+|.++++..
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 4677888999999999999999999888743221 12234556776555433
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.43 E-value=0.0069 Score=53.43 Aligned_cols=141 Identities=16% Similarity=0.094 Sum_probs=90.3
Q ss_pred CEEEEEECC-CCCEEEEEeC-----------------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEE-eC
Q psy11015 182 GVWDVAVRP-GQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SG 242 (360)
Q Consensus 182 ~V~~l~~~~-~~~~l~sgs~-----------------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~-s~ 242 (360)
....+++.+ +|.+.++-.. ++.|..||..+++......+ -.....|+|+|+|+.++.+ +.
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCC
Confidence 478899999 8987666432 36788899877764333222 2345689999999865544 56
Q ss_pred CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC----------
Q psy11015 243 DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW---------- 312 (360)
Q Consensus 243 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~---------- 312 (360)
.+.|.+|++..... . ....+....+ ...+++.++|++.++...
T Consensus 206 ~~~I~~~~~~~~~~-------------------------~-~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~ 258 (322)
T 2fp8_A 206 SHQIVKYWLEGPKK-------------------------G-TAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRV 258 (322)
T ss_dssp GTEEEEEESSSTTT-------------------------T-CEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred CCeEEEEECCCCcC-------------------------C-ccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCC
Confidence 68899998764200 0 0111111123 678999999987666544
Q ss_pred CCcEEEEECCCCeEEEEEecCC----CceEEEEEcCCCCEEEcc
Q psy11015 313 DRVANLFDVETGTILQSLTEPG----EAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 313 dg~i~iwd~~~~~~~~~l~~h~----~~v~~~~~~~~g~~las~ 352 (360)
.+.|..+|. .|+.+..+.... ..++++++. +|.+.+++
T Consensus 259 ~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~ 300 (322)
T 2fp8_A 259 DPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGT 300 (322)
T ss_dssp EEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE-TTEEEEEC
T ss_pred ccEEEEECC-CCCEEEEEECCCCCccccceEEEEe-CCEEEEee
Confidence 467888886 477777776442 346777774 56655554
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.40 E-value=0.033 Score=55.73 Aligned_cols=147 Identities=13% Similarity=0.028 Sum_probs=97.0
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--------CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEc
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~--------h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~ 251 (360)
...|.++...++|. |-.|+.++-|..|+..++........ ....|.++...++|.+|..|+.++-+.+||.
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 35699999998885 55577787899999887754433211 2356999999888885677788777999998
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~ 331 (360)
.++....... ..+ . .....|.++...++|...+ |+.+ -+.+||..+++......
T Consensus 435 ~~~~~~~~~~--------------------~~~--~--l~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 435 NSGQVENFNQ--------------------RNS--Q--LVNENVYAILPDGEGNLWL-GTLS-ALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp TTCCEEEECT--------------------TTS--C--CSCSCEEEEEECSSSCEEE-EESS-CEEEEETTTTEEEECCB
T ss_pred CCCcEEEeec--------------------CCC--C--cCCCeeEEEEECCCCCEEE-EecC-ceeEEeCCCCeEEEccc
Confidence 7663221100 000 0 1345788998888887555 4444 48899988876533221
Q ss_pred c------CCCceEEEEEcCCCCEEEccc
Q psy11015 332 E------PGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 332 ~------h~~~v~~~~~~~~g~~las~~ 353 (360)
. +...|.++...++|.+.++..
T Consensus 489 ~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 489 EKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp CTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred cccccccCCceEEEEEECCCCCEEEEeC
Confidence 1 235789999999887655443
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.27 E-value=0.0044 Score=60.85 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=28.9
Q ss_pred EcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC
Q psy11015 300 WLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333 (360)
Q Consensus 300 ~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h 333 (360)
+...+.++++|+.||.++.||..+|+.+..+...
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 3346788999999999999999999999888754
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.25 E-value=0.078 Score=46.59 Aligned_cols=139 Identities=9% Similarity=-0.117 Sum_probs=84.9
Q ss_pred CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEccc
Q psy11015 180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVI 253 (360)
Q Consensus 180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~----~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~ 253 (360)
...+.+++|++.+. ++++-...+.|..+++.. ......+...-.....+++.+.+ .++++-...+.|.++++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 45678999998655 555556678999999876 22222333233456789998654 4555656778899998764
Q ss_pred CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECCCCeEEEEEe
Q psy11015 254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLT 331 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~~~~~~~~l~ 331 (360)
... ...+...-.....+++.|.+..|+.+... +.|..+++. |.....+.
T Consensus 109 ~~~----------------------------~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~ 159 (316)
T 1ijq_A 109 VKR----------------------------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLV 159 (316)
T ss_dssp SSE----------------------------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEE
T ss_pred Cce----------------------------EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEE
Confidence 311 11112223467899999977766655543 678888875 43333332
Q ss_pred -cCCCceEEEEEcCCCC
Q psy11015 332 -EPGEAIRAAAGRTGGP 347 (360)
Q Consensus 332 -~h~~~v~~~~~~~~g~ 347 (360)
..-.....+++++++.
T Consensus 160 ~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSG 176 (316)
T ss_dssp CSSCSCEEEEEEETTTT
T ss_pred ECCCCCceEEEEeccCC
Confidence 2334568899997654
No 257
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.22 E-value=0.044 Score=48.48 Aligned_cols=150 Identities=8% Similarity=-0.046 Sum_probs=90.2
Q ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC--CCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~--~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
++...+.++++.+++.+++.+...+..+-+|- .+...+. ......+..+.+.+++.++ .++.+|.+.+++...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 45668899999998877776655444444553 2333332 2355678899999888755 45567777766422121
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe---
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT--- 331 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~--- 331 (360)
.+..+..- ..+...+.++++.+++..++.+. +|.+ ++....|+.-..+.
T Consensus 237 -------------------------tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 237 -------------------------NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVK 289 (327)
T ss_dssp -------------------------EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGT
T ss_pred -------------------------eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccC
Confidence 11111110 01223578899988777666554 6766 44445454333333
Q ss_pred cCCCceEEEEEcCCCCEEEcccccch
Q psy11015 332 EPGEAIRAAAGRTGGPIRASPLLLAI 357 (360)
Q Consensus 332 ~h~~~v~~~~~~~~g~~las~~~~~i 357 (360)
.+...+.+++|.+++.+++.+.++.|
T Consensus 290 ~~~~~~~~v~~~~~~~~~~~G~~G~i 315 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQGFILGQKGIL 315 (327)
T ss_dssp TSSSCCCEEEEEETTEEEEECSTTEE
T ss_pred CCCCCeEEEEEECCCceEEEcCCceE
Confidence 12456888999878888888877654
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.16 E-value=0.061 Score=48.09 Aligned_cols=139 Identities=8% Similarity=-0.094 Sum_probs=86.7
Q ss_pred CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeE
Q psy11015 180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
...+.+++|++... ++++-...+.|..+++..+.....+.........+++.+. +.++++-...+.|.+.++.....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~- 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR- 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-
Confidence 34578999997655 4555556788999998866544444333345678999875 45556666678898888764311
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-C-CcEEEEECCCCeEEEEEe-cCC
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLT-EPG 334 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-d-g~i~iwd~~~~~~~~~l~-~h~ 334 (360)
...+...-.....+++.|.+..|+...+ . +.|..+++... ....+. ..-
T Consensus 151 ---------------------------~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~ 202 (349)
T 3v64_C 151 ---------------------------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHL 202 (349)
T ss_dssp ---------------------------EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSC
T ss_pred ---------------------------EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCC
Confidence 1112223345788999997666655444 4 67888887633 223332 223
Q ss_pred CceEEEEEcCCCC
Q psy11015 335 EAIRAAAGRTGGP 347 (360)
Q Consensus 335 ~~v~~~~~~~~g~ 347 (360)
.....++++|++.
T Consensus 203 ~~PnGla~d~~~~ 215 (349)
T 3v64_C 203 FWPNGLTIDYAGR 215 (349)
T ss_dssp SCEEEEEEETTTT
T ss_pred CCcceEEEeCCCC
Confidence 3568899997544
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.16 E-value=0.081 Score=46.09 Aligned_cols=124 Identities=17% Similarity=0.103 Sum_probs=76.6
Q ss_pred eeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEE
Q psy11015 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHI 248 (360)
Q Consensus 171 ~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~v 248 (360)
+.+..|..+ .....++|++++.++++-..++.|..||.... ....+. ..+.+..+++.++|+++++..... .|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 444445332 45778999999987777778899999998754 333333 345688999999999766654433 3666
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~ 324 (360)
+|..++.... +..+ ........++..+++..+++-..+|.|..+|..++
T Consensus 100 ~d~~~g~~~~--------------------------~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 100 LVKSDGTVET--------------------------LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EECTTSCEEE--------------------------EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EcCCCCeEEE--------------------------EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 6665552211 1111 11222344555555544454445888888897765
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.14 E-value=0.0028 Score=61.18 Aligned_cols=49 Identities=18% Similarity=0.212 Sum_probs=36.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce-EEEEEcCCCC-EEEc
Q psy11015 303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEAI-RAAAGRTGGP-IRAS 351 (360)
Q Consensus 303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v-~~~~~~~~g~-~las 351 (360)
.+..++.|+.||.++.||.++|+.+..+....... .-+.+..+|+ +++.
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 46788889999999999999999998887543321 2256667776 4443
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.14 E-value=0.087 Score=48.05 Aligned_cols=143 Identities=8% Similarity=-0.133 Sum_probs=87.9
Q ss_pred cCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEee-CCCEEEEEeCCCcEEEEEc
Q psy11015 178 GHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQA 251 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p-~~~~l~s~s~d~~i~vwd~ 251 (360)
.....+.+|+|++.+. ++.+-...+.|+.+++... .....+.........+++.+ .+.++++-...+.|.+.++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 4456788999998655 4455556788998998752 23333433445678899987 4555566666788888887
Q ss_pred ccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEE
Q psy11015 252 VINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQS 329 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~ 329 (360)
..... ...+...-.....+++.|.+.+|+...+ .+.|...++........
T Consensus 189 ~g~~~----------------------------~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 189 KGVKR----------------------------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp TTCSE----------------------------EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred CCCce----------------------------EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 64311 1112223345789999997777665553 36788888764332222
Q ss_pred EecCCCceEEEEEcCCCCE
Q psy11015 330 LTEPGEAIRAAAGRTGGPI 348 (360)
Q Consensus 330 l~~h~~~v~~~~~~~~g~~ 348 (360)
+...-.....+++++.+..
T Consensus 241 ~~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGR 259 (400)
T ss_dssp ECSSCSCEEEEEEETTTTE
T ss_pred EECCCCceEEEEEEeCCCE
Confidence 2323346788999975543
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.09 E-value=0.054 Score=48.46 Aligned_cols=141 Identities=6% Similarity=-0.081 Sum_probs=84.4
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCC-CcEEEEEcccCeeE
Q psy11015 181 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWEC 257 (360)
Q Consensus 181 ~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d-~~i~vwd~~~~~~~ 257 (360)
.....+++.+. +.++++-...+.|.+.+++.......+...-.....++++|.+. ++++-... +.|..+++...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~--- 192 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--- 192 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC---
Confidence 34567888875 44556666678999999875543333444445679999998655 44554444 67777776532
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCC
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGE 335 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~ 335 (360)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-.
T Consensus 193 --------------------------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~ 246 (349)
T 3v64_C 193 --------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP 246 (349)
T ss_dssp --------------------------SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred --------------------------CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC
Confidence 11111 11234578999998777776554 457799999764332222333334
Q ss_pred ceEEEEEcCCCCEEE
Q psy11015 336 AIRAAAGRTGGPIRA 350 (360)
Q Consensus 336 ~v~~~~~~~~g~~la 350 (360)
...++++..+.-+++
T Consensus 247 ~P~giav~~~~ly~t 261 (349)
T 3v64_C 247 HPFAITVFEDSLYWT 261 (349)
T ss_dssp SEEEEEEETTEEEEE
T ss_pred CceEEEEECCEEEEe
Confidence 556777743333333
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.08 E-value=0.022 Score=50.20 Aligned_cols=158 Identities=9% Similarity=0.063 Sum_probs=93.8
Q ss_pred cCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCCCeEEEE-EeC----CC--cCeEEEEE---eeCCCEEEEEe-----
Q psy11015 178 GHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQ-YSG----HS--GSVNSVRF---LPNKDLVLSAS----- 241 (360)
Q Consensus 178 ~h~~~V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~~~~~~-~~~----h~--~~v~~i~~---~p~~~~l~s~s----- 241 (360)
+...---+.+|++....|..++ ..++|..|+...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3333445788988555555555 789999999986643333 222 11 13679999 68887777543
Q ss_pred --------CCCcEEEEEcc---cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeC-CCCcEEEEEEcCCCCEEEE
Q psy11015 242 --------GDKSVHIWQAV---INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 242 --------~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~sp~g~~l~t 309 (360)
.+..+..+|+. ++......... ....-...+.+ -......++..++|+.-++
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~----------------~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFE----------------KVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH----------------HHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCc----------------cccccccccccccccCCceeEECCCCCEEEe
Confidence 26778999987 55322210000 00000000001 1134788999999999999
Q ss_pred EECC-CcEEEEECCCCeEEEEEe--c----CCCceEEEEEcCCCCEEEcc
Q psy11015 310 ASWD-RVANLFDVETGTILQSLT--E----PGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 310 gs~d-g~i~iwd~~~~~~~~~l~--~----h~~~v~~~~~~~~g~~las~ 352 (360)
++.. +.|..++.. |+.+..+. . .....+.++++|+|..|+..
T Consensus 154 ~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 154 FALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp EEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred CCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 9988 887777755 33333221 1 12246799999999766544
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.07 E-value=0.052 Score=49.27 Aligned_cols=141 Identities=8% Similarity=-0.109 Sum_probs=86.2
Q ss_pred CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCC-CEEEEEeCCCcEEEEEcccCee
Q psy11015 179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWE 256 (360)
Q Consensus 179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~-~~l~s~s~d~~i~vwd~~~~~~ 256 (360)
....+.+++|++.+. ++++-...+.|..+++..+.....+.........+++.+.+ .++++-...+.|.+.++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~- 192 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 192 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence 344578999997555 55555667889999988665444444333456788888754 455555666778777765331
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC-C-CcEEEEECCCCeEEEEEecCC
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLTEPG 334 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~-d-g~i~iwd~~~~~~~~~l~~h~ 334 (360)
....+...-.....+++.|.+.+|+...+ . +.|..+++............-
T Consensus 193 ---------------------------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 245 (386)
T 3v65_B 193 ---------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 245 (386)
T ss_dssp ---------------------------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred ---------------------------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 01112223346788999987777665554 3 678888876433222222233
Q ss_pred CceEEEEEcCCCC
Q psy11015 335 EAIRAAAGRTGGP 347 (360)
Q Consensus 335 ~~v~~~~~~~~g~ 347 (360)
...+.++|+|++.
T Consensus 246 ~~PnGlavd~~~~ 258 (386)
T 3v65_B 246 FWPNGLTIDYAGR 258 (386)
T ss_dssp SCEEEEEEEGGGT
T ss_pred CCeeeEEEeCCCC
Confidence 4568899986543
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.07 E-value=0.1 Score=52.14 Aligned_cols=146 Identities=10% Similarity=-0.051 Sum_probs=94.3
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe----CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~----~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
...|.++...+++..|..|+.++-+..||..+++...... .....|.++...++|.+.+. +.+ -+.+||..++.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TLS-ALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESS-CEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecC-ceeEEeCCCCe
Confidence 3579999998888757778887889999998876433221 12457999998888875554 444 58889877653
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe----
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT---- 331 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~---- 331 (360)
....... .... ......|.++...++|...+.. . +-|..||..++.. .+.
T Consensus 483 ~~~~~~~--------------------~~~~--~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 483 FTTIEKE--------------------KDGT--PVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp EEECCBC--------------------TTCC--BCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSC
T ss_pred EEEcccc--------------------cccc--ccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCC
Confidence 2210000 0000 0123568899888888766544 4 4588899877765 332
Q ss_pred ---cCCCceEEEEEcCCCCEEEccc
Q psy11015 332 ---EPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 332 ---~h~~~v~~~~~~~~g~~las~~ 353 (360)
.+...|.++...++|.+.+++.
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEEEES
T ss_pred CCCCCCCeeEEEEECCCCCEEEEeC
Confidence 1345789999999888554443
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.06 E-value=0.12 Score=44.00 Aligned_cols=166 Identities=8% Similarity=0.057 Sum_probs=98.2
Q ss_pred eeeeeeee-cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe---EEEEEe------CCCcCeEEEEEeeCCCEEEE
Q psy11015 170 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYS------GHSGSVNSVRFLPNKDLVLS 239 (360)
Q Consensus 170 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~---~~~~~~------~h~~~v~~i~~~p~~~~l~s 239 (360)
+..++.+. +-....-.+++.+++.++++.-.++.+.++++.... .+.... ........++|+|.++.|++
T Consensus 58 g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v 137 (255)
T 3qqz_A 58 GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF 137 (255)
T ss_dssp CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence 45555542 222567788888888776766567888898876543 223332 12344689999999877777
Q ss_pred EeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEE-EEEECCCcEEE
Q psy11015 240 ASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANL 318 (360)
Q Consensus 240 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l-~tgs~dg~i~i 318 (360)
+.......+|.+. +... . . .... ...+...-..+...+.+++++|....+ +....++.|.+
T Consensus 138 a~E~~p~~i~~~~-g~~~------~---------~-~l~i-~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~ 199 (255)
T 3qqz_A 138 FKEKNPIEVYKVN-GLLS------S---------N-ELHI-SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE 199 (255)
T ss_dssp EEESSSEEEEEEE-STTC------S---------S-CCEE-EECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECcCCceEEEEc-cccc------C---------C-ceee-ecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence 7766566666654 1000 0 0 0000 000000000123456889999965554 55556678999
Q ss_pred EECCCCeEEEEEecCC---------CceEEEEEcCCCCEEEcccc
Q psy11015 319 FDVETGTILQSLTEPG---------EAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 319 wd~~~~~~~~~l~~h~---------~~v~~~~~~~~g~~las~~~ 354 (360)
+|.. |+.+..+.-.. ..--.++|.++|++.+++..
T Consensus 200 ~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 200 VTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp ECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred EcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 9965 66665554321 25588999999998777653
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.96 E-value=0.073 Score=48.31 Aligned_cols=135 Identities=7% Similarity=-0.080 Sum_probs=80.9
Q ss_pred CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEE-EEeCC-CcEEEEEcccCeeEe
Q psy11015 182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD-KSVHIWQAVINWECL 258 (360)
Q Consensus 182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~-s~s~d-~~i~vwd~~~~~~~~ 258 (360)
....+++.+.+. ++++-...+.|.+.++........+...-.....|++.|.+..|+ +-... +.|..+++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---- 235 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---- 235 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC----
Confidence 446678887544 556666677888888875443334444445689999998665554 44344 56777765432
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCCc
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGEA 336 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~~ 336 (360)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-..
T Consensus 236 -------------------------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 236 -------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp -------------------------SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred -------------------------CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence 11112 12234578999998777766554 4577999987643332233323345
Q ss_pred eEEEEEcCC
Q psy11015 337 IRAAAGRTG 345 (360)
Q Consensus 337 v~~~~~~~~ 345 (360)
..++++..+
T Consensus 291 P~giav~~~ 299 (386)
T 3v65_B 291 PFAITVFED 299 (386)
T ss_dssp EEEEEEETT
T ss_pred ceEEEEECC
Confidence 567777433
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.92 E-value=0.016 Score=53.61 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=83.0
Q ss_pred CEEEEEECCC--CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCC---Cc-EEEEEcccCe
Q psy11015 182 GVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KS-VHIWQAVINW 255 (360)
Q Consensus 182 ~V~~l~~~~~--~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d---~~-i~vwd~~~~~ 255 (360)
....|+|+|+ ...|+.+...+.|+.+|..++....... .......++|+++|+++++.... .. +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4578999984 3455555544899999998777554433 44568999999999955554322 11 2222211110
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEEEECCCcEEEEECCCCeEEEEE-ec-
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-TE- 332 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~tgs~dg~i~iwd~~~~~~~~~l-~~- 332 (360)
.....+. .-.....+++.| +|...++-..++.|+.+|..++.....+ ..
T Consensus 219 ---------------------------~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~ 270 (433)
T 4hw6_A 219 ---------------------------TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD 270 (433)
T ss_dssp ---------------------------CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS
T ss_pred ---------------------------ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC
Confidence 0001111 123345688999 6766666667788999998877653333 21
Q ss_pred CCCceEEEEEcCCCC
Q psy11015 333 PGEAIRAAAGRTGGP 347 (360)
Q Consensus 333 h~~~v~~~~~~~~g~ 347 (360)
....-..++|+|+|+
T Consensus 271 ~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 271 TKGSNFHIVWHPTGD 285 (433)
T ss_dssp CCSSCEEEEECTTSS
T ss_pred CCCCcccEEEeCCCC
Confidence 122335799999997
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.90 E-value=0.18 Score=44.50 Aligned_cols=159 Identities=13% Similarity=0.011 Sum_probs=88.4
Q ss_pred cceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcE
Q psy11015 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246 (360)
Q Consensus 168 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i 246 (360)
.+.+.+.....+.+.+..+.+.+++..++.+ .+|.|.. ..+.|+. .....++...+..+.+.|++.+++.+...+..
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 3444433222334567888877666555554 4555422 2222322 12223456678999999988877666444333
Q ss_pred EEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE
Q psy11015 247 HIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 326 (360)
Q Consensus 247 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~ 326 (360)
+-+|-. + ..++++. ......+..+.+.+++..+ .++.+|.+.+++...|+.
T Consensus 187 ~S~d~g-G-------------------------~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 187 STWEPG-Q-------------------------TAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN 237 (327)
T ss_dssp EEECTT-C-------------------------SSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred EEeCCC-C-------------------------CceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence 333320 1 1112221 2344578889999988755 455678887775333433
Q ss_pred EEEEec----CCCceEEEEEcCCCCEEEcccccch
Q psy11015 327 LQSLTE----PGEAIRAAAGRTGGPIRASPLLLAI 357 (360)
Q Consensus 327 ~~~l~~----h~~~v~~~~~~~~g~~las~~~~~i 357 (360)
-..+.. +...+.++++.+++.+++.+.++.|
T Consensus 238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp ECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred eEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence 222221 2235889999988888887666543
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.87 E-value=0.055 Score=53.79 Aligned_cols=70 Identities=13% Similarity=0.037 Sum_probs=47.3
Q ss_pred EEEECCCCCEEEEEeCC-----CcEEEEECCCCe--EEEEEe-CCCcCeEEEEEeeCCCEEEEEeC---CCcEEEEEccc
Q psy11015 185 DVAVRPGQPVLGSASAD-----RTVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVI 253 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~--~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~---d~~i~vwd~~~ 253 (360)
.++|+||++.|+....| ..|.++++.++. ....+. ........+.|+|||++|+..+. ...|.++|+.+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 56899999877777665 268888887764 233443 23345678899999998776553 23467777764
Q ss_pred C
Q psy11015 254 N 254 (360)
Q Consensus 254 ~ 254 (360)
+
T Consensus 305 ~ 305 (751)
T 2xe4_A 305 G 305 (751)
T ss_dssp C
T ss_pred C
Confidence 3
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.80 E-value=0.035 Score=53.59 Aligned_cols=49 Identities=22% Similarity=0.210 Sum_probs=35.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCeEEEEEecCCCc-eEEEEEcCCCC-EEEc
Q psy11015 303 DGEQVITASWDRVANLFDVETGTILQSLTEPGEA-IRAAAGRTGGP-IRAS 351 (360)
Q Consensus 303 ~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~-v~~~~~~~~g~-~las 351 (360)
.+..++.|+.||.++.||.++|+.+..+...... ..-+.+..+|+ +++.
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 5678888999999999999999999888644321 12345556775 4443
No 272
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.78 E-value=0.18 Score=46.85 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=37.0
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeC------CCcCeEEEEEeeC
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSG------HSGSVNSVRFLPN 233 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~~------h~~~v~~i~~~p~ 233 (360)
-...++|+|.|+|.++++-...+.|++++..++.. +..+.. ..+.+..|+|+|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 44678999999998777665545788888665543 222321 2456789999995
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.78 E-value=0.05 Score=53.32 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=57.1
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEECCCCeEEEEEeC--CC-------cCeEEEEEeeCCC-
Q psy11015 185 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD- 235 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~Dg~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~i~~~p~~~- 235 (360)
.++++|....++.++.++. |..+|..+|+.+..++. |. .++....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 4678888888888887763 99999999999988874 22 2333333334675
Q ss_pred --EEEEEeCCCcEEEEEcccCeeEeee
Q psy11015 236 --LVLSASGDKSVHIWQAVINWECLVS 260 (360)
Q Consensus 236 --~l~s~s~d~~i~vwd~~~~~~~~~~ 260 (360)
.++.++.+|.+.++|..+|......
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccc
Confidence 6888999999999999999877543
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.68 E-value=0.26 Score=49.16 Aligned_cols=140 Identities=9% Similarity=-0.120 Sum_probs=86.8
Q ss_pred CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcc
Q psy11015 179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV 252 (360)
Q Consensus 179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~----~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~ 252 (360)
....+.+|+|++... ++++-...+.|+.+++... .....+.........|++.+.+. ++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 445678899998544 5555566678988888752 22333443445677899987664 55566677889999876
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEECC--CcEEEEECCCCeEEEE
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQS 329 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~d--g~i~iwd~~~~~~~~~ 329 (360)
... ...+ ...-.....|++.|.+.+|+...+. +.|...++........
T Consensus 502 G~~-----------------------------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 502 GVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp SSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred CCe-----------------------------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 441 1122 2233457899999986676665542 6788888764433333
Q ss_pred EecCCCceEEEEEcCCCC
Q psy11015 330 LTEPGEAIRAAAGRTGGP 347 (360)
Q Consensus 330 l~~h~~~v~~~~~~~~g~ 347 (360)
+...-.....|++++.+.
T Consensus 553 v~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSG 570 (791)
T ss_dssp ECSSCSCEEEEEEETTTT
T ss_pred EeCCCCCceEEEEecCCC
Confidence 333334678889886543
No 275
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.64 E-value=0.03 Score=47.66 Aligned_cols=127 Identities=9% Similarity=0.108 Sum_probs=79.0
Q ss_pred CccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----cCeEEEEEeeCCCEEEEE
Q psy11015 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 166 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~-----~~v~~i~~~p~~~~l~s~ 240 (360)
+..+.+.+.++.-.. .=+.+++ ++..|+.+..++.|.++|..+.+.+..+.-.. ..++.+.|. +|.+++..
T Consensus 113 D~~t~~~~~ti~~~~-eG~glt~--dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG-EGWGLTH--NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp ETTTCCEEEEEECSS-CCCCEEE--CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECccCcEEEEEECCC-CceEEec--CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 335666777776432 2244553 45656655557889999999998887765321 335667886 77766666
Q ss_pred eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEEC
Q psy11015 241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312 (360)
Q Consensus 241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~ 312 (360)
-.+..|.+.|..++.....+....... .......-....+.|||+|+++.|+..+.
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~----------------~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILA----------------EAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGG----------------GSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCcc----------------ccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 678899999999986655432221000 00000111245789999999887766664
No 276
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.59 E-value=0.37 Score=42.93 Aligned_cols=161 Identities=11% Similarity=0.060 Sum_probs=88.7
Q ss_pred eeeeeeeecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEE--EEE----eCCCcCeEEEEEeeC----CCEEEE
Q psy11015 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQY----SGHSGSVNSVRFLPN----KDLVLS 239 (360)
Q Consensus 170 ~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~--~~~----~~h~~~v~~i~~~p~----~~~l~s 239 (360)
...+..+...-..-+.|+|.|+|.++++--..|.|++++...+... ..+ ....+....|+|+|+ +.+.++
T Consensus 21 ~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 21 VKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 3445555556677899999999987777766899999987666432 222 123456899999995 434343
Q ss_pred Ee--CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccc-eeEe---eCCCCcEEEEEEcCCCCEEEEEEC-
Q psy11015 240 AS--GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTP-VKEL---LGHSNVVIAADWLSDGEQVITASW- 312 (360)
Q Consensus 240 ~s--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~h~~~v~~i~~sp~g~~l~tgs~- 312 (360)
-+ .+..|.-|.+..+.. ... ....... +..+ ..|. -..++|.|+|.+.++.+.
T Consensus 101 yt~~~~~~v~R~~~~~~~~----------~~~--------~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKP----------SGE--------QLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp EECSSSEEEEEEEBCTTSC----------TTC--------CBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBCT
T ss_pred EecCCCCEEEEEEeCCCCc----------ccc--------cCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECCC
Confidence 22 334444444432100 000 0000001 1111 1233 456999999987776442
Q ss_pred ------------CCcEEEEECCCC---------eEEEEEecCCCceEEEEEcCCCCEEEcc
Q psy11015 313 ------------DRVANLFDVETG---------TILQSLTEPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 313 ------------dg~i~iwd~~~~---------~~~~~l~~h~~~v~~~~~~~~g~~las~ 352 (360)
.|.|.-.+.... ..+. -.+|.+ ...++|+|+|.+.++-
T Consensus 161 ~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 161 GDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 244444444321 1111 124543 4678999998877653
No 277
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.59 E-value=0.16 Score=45.52 Aligned_cols=151 Identities=15% Similarity=0.021 Sum_probs=81.3
Q ss_pred eecCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCe-EEEEEe---CCCcCeEEEEEeeC----CCEEEEEeC---C-
Q psy11015 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS---GHSGSVNSVRFLPN----KDLVLSASG---D- 243 (360)
Q Consensus 176 l~~h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~-~~~~~~---~h~~~v~~i~~~p~----~~~l~s~s~---d- 243 (360)
+...-...++|+|.|++.+ +.+..+|.|++++ ..+. .+..+. ........|+|+|+ +.++++-+. +
T Consensus 24 va~~l~~P~~ia~~pdG~l-~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 24 VASDLEVPWSIAPLGGGRY-LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp EECSCSCEEEEEEEETTEE-EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred EeCCCCCCeEEEEcCCCeE-EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 3333456789999999974 4455669999997 4554 222221 12346889999997 444444332 3
Q ss_pred ---CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccc-eeEee-CCCCcEEEEEEcCCCCEEEEEEC------
Q psy11015 244 ---KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTP-VKELL-GHSNVVIAADWLSDGEQVITASW------ 312 (360)
Q Consensus 244 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~h~~~v~~i~~sp~g~~l~tgs~------ 312 (360)
..|..|+...+... ....+. +..+. +.......++|.|+|.+.++.+.
T Consensus 102 ~~~~~v~r~~~~~~~~~---------------------~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~ 160 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFK---------------------LKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRL 160 (354)
T ss_dssp CEEEEEEEEEECSSSCC---------------------EEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGG
T ss_pred CcceEEEEEEECCCCcC---------------------cCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcc
Confidence 45666665432000 000011 11121 11112356899999987666432
Q ss_pred -------CCcEEEEECCCCe----------EEEEEecCCCceEEEEEcC-CCCEEEcc
Q psy11015 313 -------DRVANLFDVETGT----------ILQSLTEPGEAIRAAAGRT-GGPIRASP 352 (360)
Q Consensus 313 -------dg~i~iwd~~~~~----------~~~~l~~h~~~v~~~~~~~-~g~~las~ 352 (360)
.|.|.-++.. |. .+. ..++.. ...++|+| +|.+.++-
T Consensus 161 ~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 161 AQDLSSLAGKILRVDEE-GRPPADNPFPNSPIW-SYGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp GTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEE-EECCSC-CCEEEECTTTCCEEEEE
T ss_pred ccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEE-EEccCC-cceEEEeCCCCCEEEEe
Confidence 2445555543 22 111 123433 46799999 78877653
No 278
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.57 E-value=0.11 Score=46.55 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=45.1
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE--EEEEe---CCCcCeEEEEEeeC---CCEE-EEEeCC-----C
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPN---KDLV-LSASGD-----K 244 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~--~~~~~---~h~~~v~~i~~~p~---~~~l-~s~s~d-----~ 244 (360)
.-..-+.|+|.|+|.++++ ..+|.|++++ .+.. +..+. ........|+|+|+ +..| ++-... .
T Consensus 29 ~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3446789999999985554 5669999998 4542 22221 12356899999998 4444 443332 5
Q ss_pred cEEEEEcc
Q psy11015 245 SVHIWQAV 252 (360)
Q Consensus 245 ~i~vwd~~ 252 (360)
.|..|+..
T Consensus 106 ~v~r~~~~ 113 (352)
T 2ism_A 106 QVVRLRHL 113 (352)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 56677665
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.57 E-value=0.072 Score=49.90 Aligned_cols=143 Identities=10% Similarity=-0.007 Sum_probs=82.4
Q ss_pred CEEEEEECCC-CCEEEEE-eCCCcEEEEECCCCeEEEEEeCC---CcCeEEEEE-------eeCCCEEEEEeCCC-c---
Q psy11015 182 GVWDVAVRPG-QPVLGSA-SADRTVRLWSTQTGKCVLQYSGH---SGSVNSVRF-------LPNKDLVLSASGDK-S--- 245 (360)
Q Consensus 182 ~V~~l~~~~~-~~~l~sg-s~Dg~v~iwd~~~~~~~~~~~~h---~~~v~~i~~-------~p~~~~l~s~s~d~-~--- 245 (360)
....|+|+|. +..|+.+ ...+.|++.|+..+.....+..- ......|+| +++|+.++.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3578999983 4444444 44467889998877665544322 224899999 99999665555443 2
Q ss_pred ---EEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCC-CEEEEEECCCcEEEEEC
Q psy11015 246 ---VHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDV 321 (360)
Q Consensus 246 ---i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g-~~l~tgs~dg~i~iwd~ 321 (360)
|.+++........ .......+..+ . ....++++|++ .++++-..++.|..+|+
T Consensus 220 ~~~V~~i~r~~~G~~~-------------------~~~~~~~v~~~-~---~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 220 SPSVYIIKRNADGTFD-------------------DRSDIQLIAAY-K---QCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp EEEEEEEECCTTSCCS-------------------TTSCEEEEEEE-S---CCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred CceEEEEecCCCCcee-------------------ecccceeeccC-C---CceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 4455432210000 00000112222 1 23467889954 44556667788999998
Q ss_pred C-------CCeE-----------EEE-Ee-cCCCceEEEEEcCCCC
Q psy11015 322 E-------TGTI-----------LQS-LT-EPGEAIRAAAGRTGGP 347 (360)
Q Consensus 322 ~-------~~~~-----------~~~-l~-~h~~~v~~~~~~~~g~ 347 (360)
. ++.. ... +. +.....+.++|+|+|+
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK 322 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC
Confidence 7 5543 122 22 2234468999999998
No 280
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.54 E-value=0.072 Score=48.55 Aligned_cols=117 Identities=13% Similarity=0.147 Sum_probs=76.0
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCe------------EEEEEeC------CCcCeEEEEEeeC---CCEEEEE
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYSG------HSGSVNSVRFLPN---KDLVLSA 240 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~------------~~~~~~~------h~~~v~~i~~~p~---~~~l~s~ 240 (360)
.|..+..+|+|.+||..+.. +|.|-.+..+. ..+.|.- ...+|..+.|||- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57889999999999988765 78887776321 1233432 2467999999994 5689999
Q ss_pred eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE--CCCcEE
Q psy11015 241 SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVAN 317 (360)
Q Consensus 241 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs--~dg~i~ 317 (360)
..|++|++||+......+. ..........+..+...|.+++|.++|-.|...+ .+|-|+
T Consensus 146 tsD~~Ir~yDl~~s~~~P~------------------~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI------------------VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE------------------EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCc------------------chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 9999999999986321111 0000001112223446788999988776665544 556554
No 281
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.50 E-value=0.16 Score=50.56 Aligned_cols=144 Identities=8% Similarity=-0.029 Sum_probs=90.6
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE---eCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCee
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~---~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~ 256 (360)
...|.++...+++. |..|+.++-+..||..++...... ......|.++...++|.+. .|+.++-+..+|..++..
T Consensus 362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEE
T ss_pred CcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcE
Confidence 35699999988775 556676677888998754322111 1234568999888777654 467766788888765521
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecC---
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP--- 333 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h--- 333 (360)
... .........|.++...++|... .|+. +-|..||..+++........
T Consensus 440 ~~~--------------------------~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~ 491 (781)
T 3v9f_A 440 QII--------------------------ELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQ 491 (781)
T ss_dssp EEC--------------------------CSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSS
T ss_pred EEe--------------------------ccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccc
Confidence 110 0001134578888888777544 4555 55889998876543332222
Q ss_pred --CCceEEEEEcCCCCEEEccc
Q psy11015 334 --GEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 334 --~~~v~~~~~~~~g~~las~~ 353 (360)
...|.+++..++|.+.++..
T Consensus 492 ~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 492 LLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp CSCSCEEEEEECTTCCEEEEES
T ss_pred cccceeEEEEEcCCCCEEEEEc
Confidence 46789999998888666544
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.39 E-value=0.26 Score=43.27 Aligned_cols=136 Identities=7% Similarity=-0.107 Sum_probs=84.1
Q ss_pred CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015 182 GVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECL 258 (360)
Q Consensus 182 ~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~ 258 (360)
.+.+++|++.+. ++.+-...+.|..+++..+.. ...+...-.....+++.+. +.++++-...+.|.++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--- 112 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--- 112 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---
Confidence 466889998544 555666678899999876532 1222222345678899874 4555666667889999876431
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEE-ecCC
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSL-TEPG 334 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l-~~h~ 334 (360)
...+ .........+++.|.+.+|+.+.+ .+.|...++. |.....+ ...-
T Consensus 113 --------------------------~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l 165 (318)
T 3sov_A 113 --------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEI 165 (318)
T ss_dssp --------------------------CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC
T ss_pred --------------------------EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCC
Confidence 1112 133345788999987667666553 4778888875 3322333 2223
Q ss_pred CceEEEEEcCCCC
Q psy11015 335 EAIRAAAGRTGGP 347 (360)
Q Consensus 335 ~~v~~~~~~~~g~ 347 (360)
...+.++++|++.
T Consensus 166 ~~Pnglavd~~~~ 178 (318)
T 3sov_A 166 YWPNGLTLDYEEQ 178 (318)
T ss_dssp SCEEEEEEETTTT
T ss_pred CCccEEEEeccCC
Confidence 3568899998543
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.29 E-value=0.17 Score=48.56 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=51.6
Q ss_pred EEECCCCCEEEEEeCC----------------CcEEEEECCCCeEEEEEeCC--C--------cCeEEEEEeeCCC---E
Q psy11015 186 VAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGH--S--------GSVNSVRFLPNKD---L 236 (360)
Q Consensus 186 l~~~~~~~~l~sgs~D----------------g~v~iwd~~~~~~~~~~~~h--~--------~~v~~i~~~p~~~---~ 236 (360)
+++.+....++.++.+ +.|..+|..+|+.+..++.. . .++ -+...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEE
Confidence 5667766666666532 36999999999998888632 1 122 122234674 5
Q ss_pred EEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015 237 VLSASGDKSVHIWQAVINWECLVSN 261 (360)
Q Consensus 237 l~s~s~d~~i~vwd~~~~~~~~~~~ 261 (360)
++.++.+|.+.++|..++.......
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEeeec
Confidence 7788999999999999998776543
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.25 E-value=0.24 Score=45.59 Aligned_cols=71 Identities=10% Similarity=0.059 Sum_probs=51.1
Q ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcc
Q psy11015 182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV 252 (360)
Q Consensus 182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~-~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~ 252 (360)
...+++++| ++.++++-..++.|..++...+....... +.......++|+|+|+ ++++-...+.|..++..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 356788999 67777777778899999998775422222 1224578999999999 45555667889998765
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.25 E-value=0.25 Score=49.14 Aligned_cols=145 Identities=15% Similarity=0.067 Sum_probs=90.0
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC-----CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccC
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 254 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-----~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~ 254 (360)
...|.++...+++. |..|+. +-+..||..+++........ ...|.++...++|.+.+ |+.++-+..||..++
T Consensus 449 ~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred CCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 46789999988875 444555 56888998876544333222 35789999988887554 555334777876654
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec--
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE-- 332 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-- 332 (360)
...... .... .....|.++...++|...+ |+.+|.+..||..+++. ..+..
T Consensus 526 ~~~~~~-----------------------~~~~--l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~ 578 (781)
T 3v9f_A 526 LVRKFN-----------------------QYEG--FCSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKE 578 (781)
T ss_dssp EEEEEC-----------------------TTTT--CSCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGG
T ss_pred eEEEcc-----------------------CCCC--CCCCeeEEEEECCCCCEEE-EECCCceEEECCCCCcE-EEccccC
Confidence 211100 0000 1235688998888887655 44467658899877653 33322
Q ss_pred --CCCceEEEEEcCCCCEEEcccc
Q psy11015 333 --PGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 333 --h~~~v~~~~~~~~g~~las~~~ 354 (360)
....|.+++..++|.+-+++..
T Consensus 579 gl~~~~i~~i~~d~~g~lW~~t~~ 602 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWASTNT 602 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEEECSS
T ss_pred CCCCceEEEEEECCCCCEEEEcCC
Confidence 2346788888888887666543
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.24 E-value=0.19 Score=46.27 Aligned_cols=155 Identities=9% Similarity=0.004 Sum_probs=89.1
Q ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEE-e-CCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEccc--Ce
Q psy11015 182 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-S-GHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVI--NW 255 (360)
Q Consensus 182 ~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~-~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~--~~ 255 (360)
....++++| ++.++++-..++.|+.++..++.....+ . +....-..++|+|+++ ++++-...+.|..+++.. +.
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK 308 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence 346688899 6766666667788999999877652322 2 1222345799999998 455555678899888652 21
Q ss_pred e----EeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE---------cCCCCEEEEEECCCcEEEEECC
Q psy11015 256 E----CLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW---------LSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 256 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~---------sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
. ...-.. .... ..... .....-.....+++ .++|...++-...+.|+.++.
T Consensus 309 ~~~~~~~ag~~-----------g~~g-~~dg~---~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 309 LAVPYIVCGQH-----------SSPG-WVDGM---GTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp BCCCEEEEECT-----------TCCC-CBCEE---GGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred cCcEEEEEecC-----------CCCc-cCCCc---ccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence 0 000000 0000 00000 00001124667888 667766666667788999984
Q ss_pred CCeEEEEEecCC------------------CceEEEEEc-CCCCEEEccc
Q psy11015 323 TGTILQSLTEPG------------------EAIRAAAGR-TGGPIRASPL 353 (360)
Q Consensus 323 ~~~~~~~l~~h~------------------~~v~~~~~~-~~g~~las~~ 353 (360)
+|. +.++.+.. .....++++ ++|.+.++-.
T Consensus 373 ~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 373 EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 564 33443211 136789999 7887666543
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.22 E-value=0.17 Score=45.03 Aligned_cols=137 Identities=12% Similarity=0.169 Sum_probs=83.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC----CC---EEEEEeC---CCcEEEEEcc--cCeeEee
Q psy11015 192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KD---LVLSASG---DKSVHIWQAV--INWECLV 259 (360)
Q Consensus 192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~----~~---~l~s~s~---d~~i~vwd~~--~~~~~~~ 259 (360)
..+++.....+-+.+||+ .|+.++.+.. +.++.+..-|+ |. ++++... +++|.+|++. ++. ...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 346666777889999999 8998888864 67888888773 22 2333333 5789999774 221 100
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEE--cCC-CC-EEEEEECCCcEEEEEC-------CCCeEEE
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSD-GE-QVITASWDRVANLFDV-------ETGTILQ 328 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--sp~-g~-~l~tgs~dg~i~iwd~-------~~~~~~~ 328 (360)
.......+..-...+..+|+ +|. +. ++++...+|.+..|++ .+++.+.
T Consensus 116 ---------------------i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR 174 (355)
T 3amr_A 116 ---------------------MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR 174 (355)
T ss_dssp ---------------------CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred ---------------------ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE
Confidence 00000000001144566777 674 44 6788888899999988 2346677
Q ss_pred EEecCCCceEEEEEcCC-CCEEEcccc
Q psy11015 329 SLTEPGEAIRAAAGRTG-GPIRASPLL 354 (360)
Q Consensus 329 ~l~~h~~~v~~~~~~~~-g~~las~~~ 354 (360)
++... +.+-.|+..+. |.++++-.+
T Consensus 175 ~f~lg-sq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 175 AFKMN-SQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp EEECS-SCEEEEEEETTTTEEEEEETT
T ss_pred EecCC-CCcceEEEcCCCCeEEEeccc
Confidence 77654 46777777764 555554444
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.19 E-value=0.059 Score=52.64 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=75.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEECCCCe--EEEEEe-CCCcCeEEEEEeeCCCEEEEEeC-CCcEEE
Q psy11015 185 DVAVRP-GQPVLGSASADR-----------TVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG-DKSVHI 248 (360)
Q Consensus 185 ~l~~~~-~~~~l~sgs~Dg-----------~v~iwd~~~~~--~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~-d~~i~v 248 (360)
++++.+ ++.+++.|+.++ .+.+||..+++ .+..+. .+.....++++.+++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 788888887653 58899998774 233332 23333445777789999999884 458999
Q ss_pred EEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC-----CcEEEEECC
Q psy11015 249 WQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD-----RVANLFDVE 322 (360)
Q Consensus 249 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d-----g~i~iwd~~ 322 (360)
||..++.-. .+..+.. ...-.+++..++|+.++.|+ .+ ..+.+||..
T Consensus 270 yd~~t~~W~--------------------------~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSSSDSWI--------------------------PGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGGGTEEE--------------------------ECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCcCCcee--------------------------ECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 998766221 1111111 11112455667899988888 44 569999998
Q ss_pred CCeEEE
Q psy11015 323 TGTILQ 328 (360)
Q Consensus 323 ~~~~~~ 328 (360)
+.....
T Consensus 323 t~~W~~ 328 (656)
T 1k3i_A 323 SKTWTS 328 (656)
T ss_dssp TTEEEE
T ss_pred CCccee
Confidence 876543
No 289
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.15 E-value=0.58 Score=42.65 Aligned_cols=138 Identities=12% Similarity=0.088 Sum_probs=82.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC----CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCC
Q psy11015 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS 266 (360)
Q Consensus 191 ~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h----~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 266 (360)
+|..++.+- ++.||.-++..+..-+.+..- -+.|..+..+|+|+++|.. ++..|.|-.+..+.....
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~------- 101 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVE------- 101 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCC-------
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCc-------
Confidence 344444443 367777777644333333321 2257889999999988776 566899988763311000
Q ss_pred CCCCCCCCCCCccccccceeEee------CCCCcEEEEEEcCC---CCEEEEEECCCcEEEEECCCCe--EEEEEe----
Q psy11015 267 DLDESKEPDESSITLRTPVKELL------GHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGT--ILQSLT---- 331 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~i~~sp~---g~~l~tgs~dg~i~iwd~~~~~--~~~~l~---- 331 (360)
.. .....-....+. ....+|..+-|+|- |..|++-..|++|++||+.... +. .+.
T Consensus 102 --------~~-~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~ 171 (452)
T 3pbp_A 102 --------DV-SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN 171 (452)
T ss_dssp --------CH-HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS
T ss_pred --------cc-ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc
Confidence 00 000000011111 13568999999994 5689999999999999997521 22 332
Q ss_pred -----cCCCceEEEEEcCCCC
Q psy11015 332 -----EPGEAIRAAAGRTGGP 347 (360)
Q Consensus 332 -----~h~~~v~~~~~~~~g~ 347 (360)
.....|.+++|.++|.
T Consensus 172 ~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 172 SFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp EEESCSSCCCEEEEEECTTSS
T ss_pred ccCCCcccceEEEEEEcCCCc
Confidence 1236789999998775
No 290
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.09 E-value=0.31 Score=42.33 Aligned_cols=85 Identities=12% Similarity=0.048 Sum_probs=56.4
Q ss_pred CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCC
Q psy11015 212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGH 291 (360)
Q Consensus 212 ~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 291 (360)
.+.+..+.. ......++|+|+++++++...++.|..||..... ...+ ..
T Consensus 22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-----------------------------~~~~-~~ 70 (306)
T 2p4o_A 22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-----------------------------QIHA-TV 70 (306)
T ss_dssp EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-----------------------------EEEE-EC
T ss_pred ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce-----------------------------EEEE-eC
Confidence 344555543 2567899999999977777788899999865431 1111 12
Q ss_pred CCcEEEEEEcCCCCEEEEEECC-C-cEEEEECCCCeEE
Q psy11015 292 SNVVIAADWLSDGEQVITASWD-R-VANLFDVETGTIL 327 (360)
Q Consensus 292 ~~~v~~i~~sp~g~~l~tgs~d-g-~i~iwd~~~~~~~ 327 (360)
...+.++++.++|+.+++.... + .|..+|..+++..
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 2468899999999976655443 2 4667787777654
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.99 E-value=1.5 Score=43.77 Aligned_cols=117 Identities=11% Similarity=-0.047 Sum_probs=74.7
Q ss_pred CCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-CC-CcEEEEEcccCe
Q psy11015 179 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD-KSVHIWQAVINW 255 (360)
Q Consensus 179 h~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~d-~~i~vwd~~~~~ 255 (360)
.......|++.+.+. ++++-...+.|.+.++........+.........|++.|.+..|+... .. +.|.+.++...
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~- 547 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 547 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-
Confidence 345567889987664 555666778999999875544444444455689999999755444443 33 66777776533
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETG 324 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~ 324 (360)
....+ ...-.....|++.+.+..|+.+.. .+.|..+++...
T Consensus 548 ----------------------------~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 548 ----------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp ----------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ----------------------------ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 11122 122346788999877777766543 467888887643
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.98 E-value=0.74 Score=40.35 Aligned_cols=139 Identities=4% Similarity=-0.189 Sum_probs=82.2
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC--CCcEEEEEcccCeeE
Q psy11015 181 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG--DKSVHIWQAVINWEC 257 (360)
Q Consensus 181 ~~V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~--d~~i~vwd~~~~~~~ 257 (360)
.....+++.+. +.++++-...+.|.++++........+.........+++.|.+..++.+.. .+.|...++...
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--- 155 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--- 155 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---
Confidence 34567888874 445566667789999998754333333344556899999986555554442 466776665422
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEecCCC
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTEPGE 335 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~h~~ 335 (360)
....+ ...-...+.++|+|++..|+.+. ..+.|..+|+........+...-.
T Consensus 156 --------------------------~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 209 (318)
T 3sov_A 156 --------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP 209 (318)
T ss_dssp --------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS
T ss_pred --------------------------CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC
Confidence 11111 12234568999999777776554 467899999864322222222334
Q ss_pred ceEEEEEcCCCCE
Q psy11015 336 AIRAAAGRTGGPI 348 (360)
Q Consensus 336 ~v~~~~~~~~g~~ 348 (360)
...++++..++-+
T Consensus 210 ~P~glav~~~~ly 222 (318)
T 3sov_A 210 HPFALTLFEDILY 222 (318)
T ss_dssp CEEEEEEETTEEE
T ss_pred CceEEEEeCCEEE
Confidence 4566666544333
No 293
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.96 E-value=0.27 Score=47.41 Aligned_cols=76 Identities=12% Similarity=0.043 Sum_probs=54.1
Q ss_pred EEEECCCCCEEEEEeCC----------------CcEEEEECCCCeEEEEEeCCCc----------CeEEEEEe-eCC---
Q psy11015 185 DVAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGHSG----------SVNSVRFL-PNK--- 234 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~D----------------g~v~iwd~~~~~~~~~~~~h~~----------~v~~i~~~-p~~--- 234 (360)
.+++.+....++.+..+ +.|..+|..+|+.+..++.... ++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 34666777777777655 3899999999999888874321 121 2222 457
Q ss_pred CEEEEEeCCCcEEEEEcccCeeEeeeC
Q psy11015 235 DLVLSASGDKSVHIWQAVINWECLVSN 261 (360)
Q Consensus 235 ~~l~s~s~d~~i~vwd~~~~~~~~~~~ 261 (360)
..++.++.+|.+.++|..+|.......
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 467778999999999999998776543
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.86 E-value=0.2 Score=48.17 Aligned_cols=77 Identities=6% Similarity=-0.077 Sum_probs=53.9
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CcEEEEECCCCeEEEEEeC--CC--------cCeEEEEE
Q psy11015 185 DVAVRPGQPVLGSASA--------------------D----RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRF 230 (360)
Q Consensus 185 ~l~~~~~~~~l~sgs~--------------------D----g~v~iwd~~~~~~~~~~~~--h~--------~~v~~i~~ 230 (360)
.++++|....++.+.. | +.|..+|..+|+.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 3567777777776653 2 6899999999999988863 22 1121 122
Q ss_pred e-eCCC---EEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015 231 L-PNKD---LVLSASGDKSVHIWQAVINWECLVSNN 262 (360)
Q Consensus 231 ~-p~~~---~l~s~s~d~~i~vwd~~~~~~~~~~~~ 262 (360)
. .+|+ .++.++.+|.+.++|..+|........
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 1 3664 788899999999999999987766544
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.82 E-value=0.16 Score=44.66 Aligned_cols=119 Identities=8% Similarity=-0.031 Sum_probs=78.5
Q ss_pred EEEEEE---CCCCCEEEEEe-------------CCCcEEEEECC---CCeEEEEEe--CC-----------CcCeEEEEE
Q psy11015 183 VWDVAV---RPGQPVLGSAS-------------ADRTVRLWSTQ---TGKCVLQYS--GH-----------SGSVNSVRF 230 (360)
Q Consensus 183 V~~l~~---~~~~~~l~sgs-------------~Dg~v~iwd~~---~~~~~~~~~--~h-----------~~~v~~i~~ 230 (360)
+..|.| .|++.++++.. .+..|..||+. +++.+.... +. ......++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578899 68876666543 26789999999 787665543 11 134889999
Q ss_pred eeCCCEEEEEeCC-CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEE
Q psy11015 231 LPNKDLVLSASGD-KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 309 (360)
Q Consensus 231 ~p~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~t 309 (360)
.++|+..++++.. +.|...+.......... ............+.|+++|+|+.|++
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~-----------------------~~~~~~~~~~G~nGIv~~pdg~~Liv 201 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKTVSTFA-----------------------WESGNGGQRPGYSGITFDPHSNKLIA 201 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCCEEEEE-----------------------ECCCCSSSCCSCSEEEEETTTTEEEE
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCEEeeee-----------------------ecCCCcccccCcceEEEeCCCCEEEE
Confidence 9999999988877 77655554322100000 00000111224678999999999888
Q ss_pred EECCCcEEEEECCCC
Q psy11015 310 ASWDRVANLFDVETG 324 (360)
Q Consensus 310 gs~dg~i~iwd~~~~ 324 (360)
...+|.|.-+|+.+.
T Consensus 202 ~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 202 FGGPRALTAFDVSKP 216 (334)
T ss_dssp ESSSSSEEEEECSSS
T ss_pred EcCCCeEEEEcCCCC
Confidence 866999999998743
No 296
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.82 E-value=0.86 Score=39.79 Aligned_cols=140 Identities=9% Similarity=-0.092 Sum_probs=84.3
Q ss_pred CCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-C-CcEEEEEcccCeeE
Q psy11015 181 DGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-D-KSVHIWQAVINWEC 257 (360)
Q Consensus 181 ~~V~~l~~~~~~-~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d-~~i~vwd~~~~~~~ 257 (360)
.....+++++.+ .+.++-...+.|.+.+.........+.........++++|.+..++.+.. . +.|...++...
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--- 153 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--- 153 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---
Confidence 456788998744 45556667889999998755443334434456899999986655544443 3 56777766422
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEE-ec--
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSL-TE-- 332 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l-~~-- 332 (360)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+.... ...+ ..
T Consensus 154 --------------------------~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~ 206 (316)
T 1ijq_A 154 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEK 206 (316)
T ss_dssp --------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTT
T ss_pred --------------------------CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCC
Confidence 11112 12234678999998877776554 45789999986432 2333 21
Q ss_pred CCCceEEEEEcCCCCEEEc
Q psy11015 333 PGEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 333 h~~~v~~~~~~~~g~~las 351 (360)
.-.....+++.. +.+..+
T Consensus 207 ~~~~P~giav~~-~~ly~~ 224 (316)
T 1ijq_A 207 RLAHPFSLAVFE-DKVFWT 224 (316)
T ss_dssp TTSSEEEEEEET-TEEEEE
T ss_pred ccCCcEEEEEEC-CEEEEE
Confidence 123456777753 444433
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.80 E-value=1.1 Score=40.74 Aligned_cols=136 Identities=11% Similarity=-0.078 Sum_probs=84.0
Q ss_pred CCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe-C-CCcEEEEEcccCe
Q psy11015 179 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINW 255 (360)
Q Consensus 179 h~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s-~-d~~i~vwd~~~~~ 255 (360)
.......+++.+ .+++.++-...+.|.+.+++.......+...-.....|++.|.+..|+... . .+.|...++...
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~- 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-
Confidence 345678899987 455666666778999999886654444444445689999999655554443 3 367777776532
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEE-CCCcEEEEECCCCeEEEEEec-
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTE- 332 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs-~dg~i~iwd~~~~~~~~~l~~- 332 (360)
....+ ...-.....++++|++..|+.+. ..+.|..+|+........+..
T Consensus 236 ----------------------------~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 287 (400)
T 3p5b_L 236 ----------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 287 (400)
T ss_dssp ----------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred ----------------------------ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence 11122 22234678999998888776664 457899999864432222222
Q ss_pred -CCCceEEEEEc
Q psy11015 333 -PGEAIRAAAGR 343 (360)
Q Consensus 333 -h~~~v~~~~~~ 343 (360)
.-....++++.
T Consensus 288 ~~l~~P~gl~v~ 299 (400)
T 3p5b_L 288 KRLAHPFSLAVF 299 (400)
T ss_dssp STTSSEEEEEEE
T ss_pred CCCCCCEEEEEe
Confidence 12334566664
No 298
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.69 E-value=0.15 Score=45.62 Aligned_cols=53 Identities=17% Similarity=0.266 Sum_probs=34.6
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-------eCCCcCeEEEEEeeC
Q psy11015 180 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN 233 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-------~~h~~~v~~i~~~p~ 233 (360)
-...+.|+|.|+++.|+.+...|.|++++.. +.....+ ....+....|+|+|+
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 3457899999999834445567999999853 4321111 112345789999995
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.66 E-value=0.49 Score=42.04 Aligned_cols=127 Identities=10% Similarity=0.124 Sum_probs=84.7
Q ss_pred CCEEEEEE--CCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEE
Q psy11015 181 DGVWDVAV--RPG-QP-VLGSASADRTVRLWSTQ-------TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249 (360)
Q Consensus 181 ~~V~~l~~--~~~-~~-~l~sgs~Dg~v~iwd~~-------~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vw 249 (360)
..++.+|+ +|. +. +++....+|.+..|++. +++.++.|. ..+.+..+...+....|+.+-.+.-|..+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence 56677776 774 43 68888899999999882 336677777 35678899999888899999998665555
Q ss_pred EcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCC-CCcEEEEEE--cCCCC-EEEEEE-CCCcEEEEECC-
Q psy11015 250 QAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGH-SNVVIAADW--LSDGE-QVITAS-WDRVANLFDVE- 322 (360)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~i~~--sp~g~-~l~tgs-~dg~i~iwd~~- 322 (360)
+..... ....+.+..+ .++ ...+..+++ .++|+ +|+++| .+.++.+||..
T Consensus 207 da~p~~-----------------------~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 207 SAEPDG-----------------------GSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp ECSTTS-----------------------CSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred eCCcCC-----------------------CCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 533110 0001122222 122 236888888 45555 777666 56799999996
Q ss_pred CCeEEEEEe
Q psy11015 323 TGTILQSLT 331 (360)
Q Consensus 323 ~~~~~~~l~ 331 (360)
+.+.+..|.
T Consensus 264 ~~~~vg~f~ 272 (355)
T 3amr_A 264 KNKYVADFR 272 (355)
T ss_dssp TCCEEEEEE
T ss_pred CCcEEEEEE
Confidence 777788774
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.50 E-value=0.33 Score=40.07 Aligned_cols=143 Identities=9% Similarity=-0.046 Sum_probs=78.8
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeE------EEEE-e-CCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC------VLQY-S-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 253 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~------~~~~-~-~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~ 253 (360)
.+.+++|+|++.+.+. .+|.+.-.+..+... -..+ . +-.. ..++.|.|+|.+.++ .||.|.-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5669999998875555 677766656544110 1111 1 1111 468899999987777 568877665322
Q ss_pred CeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCe------EE
Q psy11015 254 NWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT------IL 327 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~------~~ 327 (360)
.. ....... -...-.+--..+..+.|.|+|...+.. ||.+.-+...++. ..
T Consensus 117 ~~-------------------~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~ 173 (236)
T 1tl2_A 117 SD-------------------TDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARA 173 (236)
T ss_dssp ST-------------------TCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC
T ss_pred CC-------------------CCceecc--ccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccc
Confidence 10 0000000 011111222467899999999877766 7775444333221 11
Q ss_pred EEEe-cCCCceEEEEEcCCCCEEEcc
Q psy11015 328 QSLT-EPGEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 328 ~~l~-~h~~~v~~~~~~~~g~~las~ 352 (360)
..+. .....-+.+.|.++|.+.+..
T Consensus 174 ~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 174 TKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp EEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred ceeccCCcceEEEEEECCCCcEEEEe
Confidence 2222 233345567799999877655
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.46 E-value=1.3 Score=39.46 Aligned_cols=142 Identities=13% Similarity=0.071 Sum_probs=84.8
Q ss_pred CCEEEEEECC--CCC--EEEEEeC--CCcEEEEECCCC----eEEEEEeCC-CcCeEEEEEeeCCCEEEEEeC---C---
Q psy11015 181 DGVWDVAVRP--GQP--VLGSASA--DRTVRLWSTQTG----KCVLQYSGH-SGSVNSVRFLPNKDLVLSASG---D--- 243 (360)
Q Consensus 181 ~~V~~l~~~~--~~~--~l~sgs~--Dg~v~iwd~~~~----~~~~~~~~h-~~~v~~i~~~p~~~~l~s~s~---d--- 243 (360)
.....+.+.+ ++. +++.-.. +.+|.+|++..+ ..+..+.+. -...+++.+.++|.+.++... |
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 4566777654 343 3333333 567888877643 234445432 235899999999987776541 1
Q ss_pred ---------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEE-CC
Q psy11015 244 ---------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD 313 (360)
Q Consensus 244 ---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs-~d 313 (360)
..-.||.+..+ .+..+...-...+.++|+||+++++.+. ..
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~-----------------------------~~~~~~~~l~~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPN-----------------------------DVRVVAEGFDFANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTT-----------------------------CCEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred ccchhhccCCccEEEEEECC-----------------------------eEEEeecCCcccCcceECCCCCEEEEEeCCC
Confidence 12334433221 1122222234578999999999887664 56
Q ss_pred CcEEEEECC-CCeE--EEEEecCCCceEEEEEcC-CCCEEEcc
Q psy11015 314 RVANLFDVE-TGTI--LQSLTEPGEAIRAAAGRT-GGPIRASP 352 (360)
Q Consensus 314 g~i~iwd~~-~~~~--~~~l~~h~~~v~~~~~~~-~g~~las~ 352 (360)
+.|..|++. .+.. ...+ ...+....+++.+ +|++.+++
T Consensus 243 ~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 243 HKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp TEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred CeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 889999986 3432 2234 2345678899998 58876654
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.45 E-value=0.69 Score=41.28 Aligned_cols=137 Identities=13% Similarity=0.160 Sum_probs=81.0
Q ss_pred cceeeeeeeecCC-CCEEEEEECCCCCEEEEEeC---C------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEe
Q psy11015 168 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA---D------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231 (360)
Q Consensus 168 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~sgs~---D------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~ 231 (360)
.....+.++.+.. ...+++.+.++|.+.++..- | ..=++|.+..++...... .-...+.|+|+
T Consensus 151 ~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-~l~~pNGia~s 229 (355)
T 3sre_A 151 KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINIS 229 (355)
T ss_dssp TEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-EESSEEEEEEC
T ss_pred CEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-CCcccCcceEC
Confidence 4445666666643 35789999999987777641 1 222344333343332233 33567899999
Q ss_pred eCCCEEEEE-eCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC-CCCEEEE
Q psy11015 232 PNKDLVLSA-SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVIT 309 (360)
Q Consensus 232 p~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp-~g~~l~t 309 (360)
||++.++.+ +..+.|..|++....... ....+ ...+..-.+++.+ +|++.++
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~~g~l~-------------------------~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHANWTLT-------------------------PLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEE-------------------------EEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEECCCCcEe-------------------------cCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 999876655 467889999986321110 11222 1245677899998 5988887
Q ss_pred EECCC-cEEEEECC--CCeEEEEEe
Q psy11015 310 ASWDR-VANLFDVE--TGTILQSLT 331 (360)
Q Consensus 310 gs~dg-~i~iwd~~--~~~~~~~l~ 331 (360)
+..+| .|..|+.. .+..+..+.
T Consensus 284 ~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 284 CHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred ecCCceEEEEECCCCCCCCEEEEEE
Confidence 76553 34444433 244444444
No 303
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.28 E-value=0.46 Score=46.29 Aligned_cols=94 Identities=6% Similarity=0.000 Sum_probs=57.3
Q ss_pred eeecCccceeeeeeeec-CCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCeEEEEEeCCC-cCeEEEEEeeCCCEEE
Q psy11015 162 SFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVL 238 (360)
Q Consensus 162 ~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p~~~~l~ 238 (360)
.|+........+..+.. +.....++++.+++.+++.|+. ++.+.+||..+..-...-.-+. ..-.+++..+++++++
T Consensus 223 ~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 223 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEE
Confidence 34444444444444432 2233445677888999999884 4589999998765332211111 1123455667899888
Q ss_pred EEe-CC-----CcEEEEEcccCe
Q psy11015 239 SAS-GD-----KSVHIWQAVINW 255 (360)
Q Consensus 239 s~s-~d-----~~i~vwd~~~~~ 255 (360)
.|+ .+ ..+.+||..++.
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETTTTE
T ss_pred EeCcccCCcccccceEeCCCCCc
Confidence 888 44 568999998764
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.93 E-value=2.2 Score=41.21 Aligned_cols=138 Identities=7% Similarity=-0.097 Sum_probs=82.1
Q ss_pred CCCEEEEEECCCCCEEE-EEeCCCcEEEEECCCCeE-EEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCee
Q psy11015 180 RDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE 256 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~l~-sgs~Dg~v~iwd~~~~~~-~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~ 256 (360)
-....+|+|++.+..|+ +-...+.|..+++..... ...+.........+++.+.+. ++++-...+.|.+.++....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~- 117 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL- 117 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-
Confidence 44578999998666555 444567888888875432 233333335788999998555 55555667889999876441
Q ss_pred EeeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEe-c
Q psy11015 257 CLVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLT-E 332 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~-~ 332 (360)
...+. ..-.....+++.|.+.+|+...+ .+.|...++. |.....+. .
T Consensus 118 ----------------------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~ 168 (619)
T 3s94_A 118 ----------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINS 168 (619)
T ss_dssp ----------------------------CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECS
T ss_pred ----------------------------EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeC
Confidence 11121 22334668889887666665554 3566666655 33223332 2
Q ss_pred CCCceEEEEEcCCCC
Q psy11015 333 PGEAIRAAAGRTGGP 347 (360)
Q Consensus 333 h~~~v~~~~~~~~g~ 347 (360)
.-...+.+++++++.
T Consensus 169 ~~~~P~Glald~~~~ 183 (619)
T 3s94_A 169 EIYWPNGLTLDYEEQ 183 (619)
T ss_dssp SCSSEEEEEEETTTT
T ss_pred CCCCCcEEEEEccCC
Confidence 334568888887543
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.80 E-value=3 Score=40.31 Aligned_cols=138 Identities=5% Similarity=-0.123 Sum_probs=86.7
Q ss_pred CCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeE
Q psy11015 180 RDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 180 ~~~V~~l~~~~~~~~-l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
-..+.+|+|++.+.. +.+-..++.|..+++........+.........+++.+.+. ++++-...+.|.+.++....
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-- 113 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-- 113 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT--
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc--
Confidence 346789999986554 45556678999999875544344443334577889987654 55555667788888876431
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEEecCC
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSLTEPG 334 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l~~h~ 334 (360)
...+. ..-.....+++.|...+|+...+ .+.|...++.... ...+...-
T Consensus 114 ---------------------------~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~ 165 (628)
T 4a0p_A 114 ---------------------------RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNV 165 (628)
T ss_dssp ---------------------------CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSC
T ss_pred ---------------------------EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCC
Confidence 11111 23345689999986666665554 4567777765333 33333344
Q ss_pred CceEEEEEcCCCC
Q psy11015 335 EAIRAAAGRTGGP 347 (360)
Q Consensus 335 ~~v~~~~~~~~g~ 347 (360)
.....+++++++.
T Consensus 166 ~~P~GlalD~~~~ 178 (628)
T 4a0p_A 166 GRANGLTIDYAKR 178 (628)
T ss_dssp SSEEEEEEETTTT
T ss_pred CCcceEEEccccC
Confidence 5678899988644
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.42 E-value=0.87 Score=40.51 Aligned_cols=106 Identities=6% Similarity=-0.008 Sum_probs=62.1
Q ss_pred CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
-...+.++|.|+|+++++ ..++.|.+++ .+...... .+............++|+
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~-----------------------~~~v~~~g~~~p~gia~~ 83 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYA-----------------------ELSVYHRGESGLLGLALH 83 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEE-----------------------ECCCCCSTTCSEEEEEEC
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEee-----------------------cceEeecCCCCceeEEEC
Confidence 345789999999985554 5678999888 33211100 000111223567899999
Q ss_pred CC---CCEEEEEEC-C-----CcEEEEECCCCe-----EE-EEEe---cCCCceEEEEEcCCCCEEEccc
Q psy11015 302 SD---GEQVITASW-D-----RVANLFDVETGT-----IL-QSLT---EPGEAIRAAAGRTGGPIRASPL 353 (360)
Q Consensus 302 p~---g~~l~tgs~-d-----g~i~iwd~~~~~-----~~-~~l~---~h~~~v~~~~~~~~g~~las~~ 353 (360)
|+ +..|+.+.. . +.|..|+...+. .+ ..+. ........++|.|+|.+.++..
T Consensus 84 pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 84 PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 98 555544433 2 567778766431 11 2233 1112346899999998777654
No 307
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.32 E-value=0.85 Score=42.63 Aligned_cols=70 Identities=7% Similarity=-0.012 Sum_probs=47.4
Q ss_pred EEEEEECCC-CCEEEEEeCCCcEEEEECC-------CCeE-----------EEE-Ee-CCCcCeEEEEEeeCCCE-EEEE
Q psy11015 183 VWDVAVRPG-QPVLGSASADRTVRLWSTQ-------TGKC-----------VLQ-YS-GHSGSVNSVRFLPNKDL-VLSA 240 (360)
Q Consensus 183 V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~-------~~~~-----------~~~-~~-~h~~~v~~i~~~p~~~~-l~s~ 240 (360)
...++++|+ +.++++-..++.|..+|+. ++.. ... +. +.......|+|+|+|+. +++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 357788994 5566667778889999987 4543 112 22 22345689999999995 4555
Q ss_pred eCCCcEEEEEcc
Q psy11015 241 SGDKSVHIWQAV 252 (360)
Q Consensus 241 s~d~~i~vwd~~ 252 (360)
+..+.|+.++..
T Consensus 329 ~~~h~I~kid~d 340 (496)
T 3kya_A 329 INNHYFMRSDYD 340 (496)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEecC
Confidence 667788886654
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.03 E-value=2.6 Score=36.05 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=56.9
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccCeeEe
Q psy11015 191 GQPVLGSASAD-----RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL 258 (360)
Q Consensus 191 ~~~~l~sgs~D-----g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 258 (360)
++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.++.-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 45667777654 3588899887643 2222211111122222 67777777654 357788877652221
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----CcEEEEECCCCeEEE
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTILQ 328 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----g~i~iwd~~~~~~~~ 328 (360)
+..+.........+.+ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 190 --------------------------~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 190 --------------------------VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp --------------------------ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred --------------------------CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 1111111111112222 56666777664 468999998877543
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.92 E-value=2.2 Score=36.56 Aligned_cols=134 Identities=11% Similarity=0.077 Sum_probs=65.1
Q ss_pred eecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCC
Q psy11015 163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKD 235 (360)
Q Consensus 163 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~Dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~ 235 (360)
|+........+..+......-.++.+ ++.+++.|+.++ .+.+||+.+..-... +.........+.+ ++.
T Consensus 82 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 157 (302)
T 2xn4_A 82 YDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGL 157 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred ECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCE
Confidence 44444444444443332222223333 456777777653 477888877643222 1111111122222 566
Q ss_pred EEEEEeCC-------CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEE
Q psy11015 236 LVLSASGD-------KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 308 (360)
Q Consensus 236 ~l~s~s~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~ 308 (360)
+++.|+.+ ..+.+||+.++.-.. +..+.........+.+ ++..++
T Consensus 158 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~--------------------------~~~~p~~r~~~~~~~~--~~~iyv 209 (302)
T 2xn4_A 158 LYAVGGYDVASRQCLSTVECYNATTNEWTY--------------------------IAEMSTRRSGAGVGVL--NNLLYA 209 (302)
T ss_dssp EEEECCEETTTTEECCCEEEEETTTTEEEE--------------------------ECCCSSCCBSCEEEEE--TTEEEE
T ss_pred EEEEeCCCCCCCccccEEEEEeCCCCcEEE--------------------------CCCCccccccccEEEE--CCEEEE
Confidence 66666543 347788877652221 1111100111122222 566777
Q ss_pred EEECC-----CcEEEEECCCCeEEE
Q psy11015 309 TASWD-----RVANLFDVETGTILQ 328 (360)
Q Consensus 309 tgs~d-----g~i~iwd~~~~~~~~ 328 (360)
.|+.+ ..+.+||..+.+...
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred ECCCCCCcccceEEEEeCCCCCEee
Confidence 77664 368999998876543
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.83 E-value=0.34 Score=40.03 Aligned_cols=136 Identities=7% Similarity=-0.121 Sum_probs=73.7
Q ss_pred CEEEEEeCCCcEEEEECCCCe------EEEEEeC-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCC
Q psy11015 193 PVLGSASADRTVRLWSTQTGK------CVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND 265 (360)
Q Consensus 193 ~~l~sgs~Dg~v~iwd~~~~~------~~~~~~~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~ 265 (360)
..|+....| +|++=....+. ....+-. -=..+.+++|+|+|.+.+. .++.+.-.+..+..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~---------- 71 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHD---------- 71 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCST----------
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCC----------
Confidence 356666667 66655544432 1122211 1236779999999986666 55654333322110
Q ss_pred CCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeE-------EEEEecCCCc
Q psy11015 266 SDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI-------LQSLTEPGEA 336 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~-------~~~l~~h~~~ 336 (360)
.......-..+- +.. .-.++.|.|+|.+.++ .||.|.-++-.+... ...-..--..
T Consensus 72 ------------~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~ 136 (236)
T 1tl2_A 72 ------------NDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSG 136 (236)
T ss_dssp ------------TCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGG
T ss_pred ------------cccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCc
Confidence 000000111110 111 1467889999987777 569988887643211 1111122357
Q ss_pred eEEEEEcCCCCEEEcccccch
Q psy11015 337 IRAAAGRTGGPIRASPLLLAI 357 (360)
Q Consensus 337 v~~~~~~~~g~~las~~~~~i 357 (360)
+..+.+.|+|.+-|.. ++.+
T Consensus 137 ~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 137 FKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp EEEEEECTTSCEEEEE-TTEE
T ss_pred eEEEEECCCceEEEEe-CCcE
Confidence 8999999999988777 6544
No 311
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.49 E-value=0.12 Score=50.97 Aligned_cols=135 Identities=10% Similarity=-0.102 Sum_probs=74.2
Q ss_pred CCEEEEEECCCCCEEEEEe-C-CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC-EEEEEeCCCcEEEEEcccCeeE
Q psy11015 181 DGVWDVAVRPGQPVLGSAS-A-DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs-~-Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
.....++++|.+..|+.+. . .+.|.++++........+...-...+.|+|+|++. ++++-+..+.|.++++......
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 4457888998655444433 2 26777777653322222222234567899998754 5555566778888887532111
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCCce
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v 337 (360)
. +....+.-....++++..+ ..+++....+.|..+|..+|+.+..+.......
T Consensus 576 ~--------------------------~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P 628 (699)
T 1n7d_A 576 T--------------------------ILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSP 628 (699)
T ss_dssp E--------------------------ECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSC
T ss_pred E--------------------------EEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCC
Confidence 0 1000011122334555432 344455556889999988888877775433334
Q ss_pred EEEEE
Q psy11015 338 RAAAG 342 (360)
Q Consensus 338 ~~~~~ 342 (360)
+.+++
T Consensus 629 ~~i~v 633 (699)
T 1n7d_A 629 EDMVL 633 (699)
T ss_dssp CCCCB
T ss_pred cEEEE
Confidence 44544
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.23 E-value=0.15 Score=50.26 Aligned_cols=112 Identities=12% Similarity=-0.071 Sum_probs=65.1
Q ss_pred EEEEEECCC-CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEE-EEEeCC-CcEEEEEcccCeeEee
Q psy11015 183 VWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGD-KSVHIWQAVINWECLV 259 (360)
Q Consensus 183 V~~l~~~~~-~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l-~s~s~d-~~i~vwd~~~~~~~~~ 259 (360)
...|++.+. +.++++-...+.|.++++........+.........|++.|.+..| ++-... +.|.++++...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~----- 529 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----- 529 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-----
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-----
Confidence 456788754 4455555667889999987554433333333456788998865444 433222 56666554321
Q ss_pred eCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEE-ECCCcEEEEECCC
Q psy11015 260 SNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVET 323 (360)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tg-s~dg~i~iwd~~~ 323 (360)
....+ ...-...+.|+|+|++..|+.+ +..+.|..+++..
T Consensus 530 ------------------------~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 530 ------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp ------------------------CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred ------------------------CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 01111 1112345679999876655444 4567899999864
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.23 E-value=2.4 Score=37.70 Aligned_cols=107 Identities=5% Similarity=-0.153 Sum_probs=61.4
Q ss_pred CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEc
Q psy11015 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL 301 (360)
Q Consensus 222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s 301 (360)
-...+.++|.|+|++++ +..++.|.++| ..+..... .+............++|+
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~------------------------~~~v~~~g~~g~~gia~~ 81 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVA------------------------SFDVANVGEAGLLGLALH 81 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEE------------------------ECCCCCSTTCSEEEEEEC
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEee------------------------ccceeecCCCceeeEEeC
Confidence 34578999999998555 46668898886 33321100 000111223467899999
Q ss_pred CC---CCEEEEEEC----C----CcEEEEECCCC-------eEE-EEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015 302 SD---GEQVITASW----D----RVANLFDVETG-------TIL-QSLTE-PGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 302 p~---g~~l~tgs~----d----g~i~iwd~~~~-------~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~ 354 (360)
|+ +..|+.+.. + ..|..|+.... +.+ ..+.. .......++|.|+|.+.++..+
T Consensus 82 pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 82 PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 97 555544432 2 56777776543 111 12221 1123467999999997776543
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.11 E-value=6.5 Score=37.85 Aligned_cols=136 Identities=9% Similarity=-0.034 Sum_probs=80.7
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeC-CCEEEEEeCCCcEEEEEcccCeeEe
Q psy11015 181 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECL 258 (360)
Q Consensus 181 ~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~-~~~l~s~s~d~~i~vwd~~~~~~~~ 258 (360)
..+.+|+|++.+. ++++-...+.|+.+++........+...-..+..+++.+. ++++++-+..+.|.+.++....
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~--- 425 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM--- 425 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---
Confidence 3467899998555 4445556788998998754433344433456778999864 4566666677889888876431
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEee-CCCCcEEEEEEcCCCCEEEEEEC--CCcEEEEECCCCeEEEEE-ecCC
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVETGTILQSL-TEPG 334 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~g~~l~tgs~--dg~i~iwd~~~~~~~~~l-~~h~ 334 (360)
...+. ..-....++++.|...+|+-..+ .+.|...++. |.....+ ...-
T Consensus 426 --------------------------~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l 478 (619)
T 3s94_A 426 --------------------------RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSL 478 (619)
T ss_dssp --------------------------CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC
T ss_pred --------------------------EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCC
Confidence 11221 22345788899886555544443 2456655654 3222222 2223
Q ss_pred CceEEEEEcCCC
Q psy11015 335 EAIRAAAGRTGG 346 (360)
Q Consensus 335 ~~v~~~~~~~~g 346 (360)
...+.+++++.+
T Consensus 479 ~~P~GlalD~~~ 490 (619)
T 3s94_A 479 GWPNGLALDYDE 490 (619)
T ss_dssp SCEEEEEEETTT
T ss_pred CCCeeeEEcccC
Confidence 456778887643
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.04 E-value=3.6 Score=35.22 Aligned_cols=62 Identities=5% Similarity=0.029 Sum_probs=35.8
Q ss_pred CCCEEEEEeCC----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEcccC
Q psy11015 191 GQPVLGSASAD----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||..+..-... +.........+.+ ++.+++.|+.+ ..+.+||..++
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 45577777755 5688899887753222 2211111122222 66677777755 45788888765
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.36 E-value=2.9 Score=38.57 Aligned_cols=107 Identities=8% Similarity=-0.004 Sum_probs=60.8
Q ss_pred CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee------CCCCcE
Q psy11015 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL------GHSNVV 295 (360)
Q Consensus 222 ~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v 295 (360)
-...+.|+|.|+|+++++-...+.|.+++...+.... +..+. ......
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~--------------------------~~~~~~~~~~~~g~~Gl 79 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKT--------------------------VFQVPEIVNDADGQNGL 79 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--------------------------EEECTTCCCCTTSSCSE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE--------------------------EecCCccccccCCCCce
Confidence 3457899999999977765444568877654332211 11111 124567
Q ss_pred EEEEEcCC---CCEEEEEEC-------------CCcEEEEECCCC--e-----EEE-EEec-CCCceEEEEEcCCCCEEE
Q psy11015 296 IAADWLSD---GEQVITASW-------------DRVANLFDVETG--T-----ILQ-SLTE-PGEAIRAAAGRTGGPIRA 350 (360)
Q Consensus 296 ~~i~~sp~---g~~l~tgs~-------------dg~i~iwd~~~~--~-----~~~-~l~~-h~~~v~~~~~~~~g~~la 350 (360)
..++|+|+ +.+|+.... ...|.-|+...+ . .+. .+.. ..+....++|.|+|.+.+
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 89999995 555544432 124444544321 1 111 1221 123578899999998777
Q ss_pred cccc
Q psy11015 351 SPLL 354 (360)
Q Consensus 351 s~~~ 354 (360)
+..+
T Consensus 160 ~~Gd 163 (454)
T 1cru_A 160 TIGD 163 (454)
T ss_dssp EECC
T ss_pred EECC
Confidence 6544
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.31 E-value=3.2 Score=35.80 Aligned_cols=108 Identities=6% Similarity=-0.026 Sum_probs=55.6
Q ss_pred CCCEEEEEeCC--------CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeC-C-----CcEEEEEcccC
Q psy11015 191 GQPVLGSASAD--------RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASG-D-----KSVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D--------g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~-d-----~~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||..+.+-.. .+.........+. -++.+++.|+. + ..+.+||..++
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 45566666642 458889988764221 1211111111222 36666777765 2 35788887765
Q ss_pred eeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCC-----cEEEEECCCCeEEE
Q psy11015 255 WECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQ 328 (360)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg-----~i~iwd~~~~~~~~ 328 (360)
.-.. +..+........++.+ +++.++.|+.++ .+.+||..+.+...
T Consensus 176 ~W~~--------------------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 176 EWKE--------------------------LAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EEEE--------------------------CCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred eEEE--------------------------CCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 2211 1111100111112222 667777777654 48899998876543
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.18 E-value=3.6 Score=35.24 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=44.5
Q ss_pred eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC------CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeC
Q psy11015 162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPN 233 (360)
Q Consensus 162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D------g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~ 233 (360)
.|+........+..+......-.++.+ ++.+++.|+.+ ..+.+||..+..-... +.........+.+ +
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~ 149 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--N 149 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred EEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--C
Confidence 344444444444444332222223333 45677777765 4588999887653222 1111111122222 6
Q ss_pred CCEEEEEeC---------CCcEEEEEcccC
Q psy11015 234 KDLVLSASG---------DKSVHIWQAVIN 254 (360)
Q Consensus 234 ~~~l~s~s~---------d~~i~vwd~~~~ 254 (360)
+.+++.|+. -..+.+||+.++
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 666666653 244778888765
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.10 E-value=5 Score=34.15 Aligned_cols=89 Identities=12% Similarity=0.165 Sum_probs=45.6
Q ss_pred eeecCccceeeeeeeecCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCC
Q psy11015 162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK 234 (360)
Q Consensus 162 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~ 234 (360)
.++........+..+......-.++.+ ++.+++.|+.+ ..+.+||+.+..-... +.........+.+ ++
T Consensus 132 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~ 207 (301)
T 2vpj_A 132 RYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND 207 (301)
T ss_dssp EEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred EEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC
Confidence 344444444444443322222222233 46677777765 4588899887643222 1111111122222 66
Q ss_pred CEEEEEeCC-----CcEEEEEcccC
Q psy11015 235 DLVLSASGD-----KSVHIWQAVIN 254 (360)
Q Consensus 235 ~~l~s~s~d-----~~i~vwd~~~~ 254 (360)
.+++.|+.+ ..+.+||+.++
T Consensus 208 ~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 208 HIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEEeCCCCCcccceEEEEeCCCC
Confidence 677777654 45888888765
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.96 E-value=6.1 Score=34.75 Aligned_cols=149 Identities=17% Similarity=0.179 Sum_probs=90.2
Q ss_pred eeeeeeecCC----CCEEEEEECCCCCEEEEEeC-------CCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC----
Q psy11015 171 YKIRSFSGHR----DGVWDVAVRPGQPVLGSASA-------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD---- 235 (360)
Q Consensus 171 ~~~~~l~~h~----~~V~~l~~~~~~~~l~sgs~-------Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~---- 235 (360)
.+.+.|.-|. ..|.....+++.++++..|- .|.+.+|..+.+ .-+.+.||.+....+.+ +|+
T Consensus 138 ~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~--~g~~~~~ 214 (365)
T 2xzh_A 138 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM--EGNAEES 214 (365)
T ss_dssp CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECC--TTCSSCE
T ss_pred CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEec--CCCCCCc
Confidence 4555555542 34666778888886555432 367888998754 35667888665444333 222
Q ss_pred -EEEEEeC---CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEee---CCCCcEEEEEEcCCCCEE
Q psy11015 236 -LVLSASG---DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELL---GHSNVVIAADWLSDGEQV 307 (360)
Q Consensus 236 -~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~h~~~v~~i~~sp~g~~l 307 (360)
+++-+.. .+++++-++.... .. . ....+ .+..+. .-.+-..++..++....+
T Consensus 215 ~lf~fa~r~~~g~kLhIiEi~~~~-----------~~--------~-~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 215 TLFCFAVRGQAGGKLHIIEVGTPP-----------TG--------N-QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp EEEEEEEEETTEEEEEEEECSSCC-----------TT--------C-CCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCC-----------CC--------C-CCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 3333322 2578888774320 00 0 00101 111111 124456688899988899
Q ss_pred EEEECCCcEEEEECCCCeEEEEEecCCCceEEEEE
Q psy11015 308 ITASWDRVANLFDVETGTILQSLTEPGEAIRAAAG 342 (360)
Q Consensus 308 ~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~ 342 (360)
+.-+.-|.+++||+.+|.++..-+-...+|...+-
T Consensus 275 yviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~ 309 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 309 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEeCCcEEEEEEcccCcEEEEeccCCCceEEecc
Confidence 99999999999999999999877766666665544
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.86 E-value=0.45 Score=42.14 Aligned_cols=116 Identities=13% Similarity=0.157 Sum_probs=71.9
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEeCC-CcCeEEEEEe--eCCCEEEEE--eCCCcEEEEEcccCeeEeeeCCCCCCC
Q psy11015 193 PVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFL--PNKDLVLSA--SGDKSVHIWQAVINWECLVSNNDNDSD 267 (360)
Q Consensus 193 ~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h-~~~v~~i~~~--p~~~~l~s~--s~d~~i~vwd~~~~~~~~~~~~~~~~~ 267 (360)
..++.++.||.|.-.|..+|+.+..+... ..++....-. +.+..++.+ +.||.+..++..+|......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~------- 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL------- 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-------
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-------
Confidence 37899999999999999999999998753 1222221110 112233333 58999999998777333211
Q ss_pred CCCCCCCCCCccccccceeEeeCCCCcEEE---EEE-----cCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 268 LDESKEPDESSITLRTPVKELLGHSNVVIA---ADW-----LSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---i~~-----sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
. +..+. ...++.. ... ...+..+++|+.+|.+.-.|+.+|+.+..+..
T Consensus 84 ------------~----~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 84 ------------S----IRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp ------------E----HHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ------------c----cccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 0 00010 1112211 000 01456889999999999999999999988864
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.80 E-value=9.7 Score=36.73 Aligned_cols=133 Identities=12% Similarity=-0.006 Sum_probs=81.1
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCeEEEEE-eCCCcCeEEEEEee-CCCEEEEEeCCC--cEEEEEcccCe
Q psy11015 181 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLP-NKDLVLSASGDK--SVHIWQAVINW 255 (360)
Q Consensus 181 ~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h~~~v~~i~~~p-~~~~l~s~s~d~--~i~vwd~~~~~ 255 (360)
..+..|++...+. +..+-+..+.|.+.++. |+....+ .......++|+++| .|.++++-.... .|...++...
T Consensus 389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~- 466 (628)
T 4a0p_A 389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT- 466 (628)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC-
T ss_pred CCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC-
Confidence 4678999998755 55566778899999986 4444333 34456789999999 566666644333 3444443311
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEe-eCCCCcEEEEEEcCCCCEEEEEEC-CCcEEEEECCCCeEEEEEe-c
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLT-E 332 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~sp~g~~l~tgs~-dg~i~iwd~~~~~~~~~l~-~ 332 (360)
....+ ...-...+.+++.+.+..|+.+.. .+.|...++. |.....+. .
T Consensus 467 ----------------------------~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~ 517 (628)
T 4a0p_A 467 ----------------------------EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDS 517 (628)
T ss_dssp ----------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECS
T ss_pred ----------------------------CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcC
Confidence 11112 222345788999988777776654 5778888875 33333443 2
Q ss_pred CCCceEEEEEcC
Q psy11015 333 PGEAIRAAAGRT 344 (360)
Q Consensus 333 h~~~v~~~~~~~ 344 (360)
.-....+++...
T Consensus 518 ~~~~P~glav~~ 529 (628)
T 4a0p_A 518 NILQPVGLTVFE 529 (628)
T ss_dssp SCSCEEEEEEET
T ss_pred CCCCcEEEEEEC
Confidence 233456676654
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.57 E-value=5.6 Score=33.92 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=34.1
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEEEEcccC
Q psy11015 191 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||..+.+-... +.........+.+ ++.+++.|+.++ .+.+||+.++
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC
Confidence 45577777755 3588899887643221 2111111122222 667777777553 4667777655
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.53 E-value=3.7 Score=35.29 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=55.7
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccCeeEe
Q psy11015 191 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL 258 (360)
Q Consensus 191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 258 (360)
++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+.+ ..+.+||+.++.-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 45566666644 3578889887642221 1111111122222 66667777654 357788876652221
Q ss_pred eeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECC-----CcEEEEECCCCeEEE
Q psy11015 259 VSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTILQ 328 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~d-----g~i~iwd~~~~~~~~ 328 (360)
+..+........++.+ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 199 --------------------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 199 --------------------------ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp --------------------------CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred --------------------------CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 1111100111122223 56667777664 458999998876543
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.33 E-value=8 Score=33.18 Aligned_cols=62 Identities=6% Similarity=0.041 Sum_probs=34.5
Q ss_pred CCCEEEEEeC-C-----CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCCC-----cEEEEEcccC
Q psy11015 191 GQPVLGSASA-D-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~-D-----g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d~-----~i~vwd~~~~ 254 (360)
++.+++.|+. + ..+.+||+.+..-.. .+........++.+ ++.+++.|+.++ .+.+||+.++
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 4556777766 2 468889988764222 11111111122222 677777777654 4777887765
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.30 E-value=6.4 Score=34.84 Aligned_cols=116 Identities=10% Similarity=-0.033 Sum_probs=64.7
Q ss_pred EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEE
Q psy11015 217 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVI 296 (360)
Q Consensus 217 ~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 296 (360)
.+-..-...+.|+|.|+|+++++--..|.|++++...+...... .....+........
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~----------------------~~~~v~~~g~~Gll 83 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELG----------------------EVPGVSPSGEGGLL 83 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE----------------------ECTTCCCBTTBSEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeec----------------------ccCceeecCCCCce
Confidence 34334456789999999997777655899988875544211100 00001122345688
Q ss_pred EEEEcCC---CCEEEEE-E--CCCcEEEEECCC----------CeEE-EEEec-CCCceEEEEEcCCCCEEEcccc
Q psy11015 297 AADWLSD---GEQVITA-S--WDRVANLFDVET----------GTIL-QSLTE-PGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 297 ~i~~sp~---g~~l~tg-s--~dg~i~iwd~~~----------~~~~-~~l~~-h~~~v~~~~~~~~g~~las~~~ 354 (360)
.++|+|+ +.+|+.. + .++.|.-|.... .+.+ ..+.. ..+....++|.|+|.+.++..+
T Consensus 84 Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 84 GIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred eeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 9999995 3445432 2 344455555443 1122 12321 1223467999999987776443
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.12 E-value=7.7 Score=33.35 Aligned_cols=62 Identities=13% Similarity=0.021 Sum_probs=33.0
Q ss_pred CCCEEEEEeCC-------CcEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEcccC
Q psy11015 191 GQPVLGSASAD-------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D-------g~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||..+.+-... +......- +++. .++.+++.|+.+ ..+.+||+.++
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 45667777754 2477888887643221 11111111 1122 366666666542 35788888765
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.82 E-value=12 Score=34.36 Aligned_cols=151 Identities=17% Similarity=0.180 Sum_probs=93.2
Q ss_pred eeeeeeeecCC----CCEEEEEECCCCCEEEEEe-------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCC---
Q psy11015 170 CYKIRSFSGHR----DGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--- 235 (360)
Q Consensus 170 ~~~~~~l~~h~----~~V~~l~~~~~~~~l~sgs-------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~--- 235 (360)
..+++.|.-|. ..|.....+++.++++..| -.|.+.+|..+.+ .-+.+.||.+....+.. +|+
T Consensus 136 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~--~g~~~~ 212 (494)
T 1bpo_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM--EGNAEE 212 (494)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEEC--TTCSSE
T ss_pred CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEec--CCCCCC
Confidence 34555565553 3466777888888665443 2467888998754 35677888766554444 332
Q ss_pred --EEEEEeCC---CcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEee---CCCCcEEEEEEcCCCCE
Q psy11015 236 --LVLSASGD---KSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELL---GHSNVVIAADWLSDGEQ 306 (360)
Q Consensus 236 --~l~s~s~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~h~~~v~~i~~sp~g~~ 306 (360)
+++-+... ++++|-++.... .. . ....+ .+..+. .-.+-..++..++....
T Consensus 213 ~~lf~fa~r~~~g~kLhi~Ei~~~~-----------~~--------~-~~f~kk~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 213 STLFCFAVRGQAGGKLHIIEVGTPP-----------TG--------N-QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EEEEEEEECSTTCCEEEEEECSCCC-----------TT--------C-CCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred ceEEEEEEecCCCcEEEEEEcCCCc-----------cC--------C-CCccceeeeeeCCcccccCceeEEEecccCCE
Confidence 34444332 678888874320 00 0 00000 111111 12345668889998889
Q ss_pred EEEEECCCcEEEEECCCCeEEEEEecCCCceEEEEEc
Q psy11015 307 VITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR 343 (360)
Q Consensus 307 l~tgs~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~~~ 343 (360)
++.-+.-|.+++||+.+|.++..-+-...+|...+.+
T Consensus 273 iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~ 309 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (494)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEEEecCceEEEEecccceeeeeecccCCceEEeccc
Confidence 9999999999999999999998777666666655543
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.56 E-value=22 Score=37.06 Aligned_cols=112 Identities=16% Similarity=0.109 Sum_probs=67.9
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeE
Q psy11015 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 257 (360)
Q Consensus 179 h~~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~-~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~ 257 (360)
..++|++++--. | +|+.|- ..+|++|++...+.+. ....+ ..|..+.....+++++.|..-..+.++..+...
T Consensus 884 v~g~v~al~~~~-g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~-- 957 (1158)
T 3ei3_A 884 VKGAVYSMVEFN-G-KLLASI-NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPME-- 957 (1158)
T ss_dssp ESSCEEEEEEET-T-EEEEEE-TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTT--
T ss_pred cCCcCEEEeeeC-C-EEEEEc-CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC--
Confidence 468899987332 4 444333 4789999997654333 11112 123333333357889999888777776543221
Q ss_pred eeeCCCCCCCCCCCCCCCCCccccccceeEee--CCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 258 LVSNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
..+..+. -+...++++.+-.+ ..++.+..+|.+.+....
T Consensus 958 -------------------------~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 958 -------------------------GNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp -------------------------TEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEEC
T ss_pred -------------------------CeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecC
Confidence 0122221 24567888888744 578889999999988654
No 330
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.26 E-value=3.8 Score=36.32 Aligned_cols=110 Identities=9% Similarity=-0.022 Sum_probs=58.6
Q ss_pred cCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcC
Q psy11015 223 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS 302 (360)
Q Consensus 223 ~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp 302 (360)
...+.|+|.|+|+.++.+...+.|++++.. +..... .................++|+|
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~---------------------~~~~~~v~~~g~~g~~gia~~p 75 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAP---------------------LSGVPDVWAHGQGGLLDVVLAP 75 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCC---------------------CBSCCCCCCSTTCSEEEEEECT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeE---------------------ecCCcccccCCCCCceeEEECC
Confidence 356899999999834445567889888743 211000 0000001112234568899999
Q ss_pred C---CCEEEEEE-C-------CCcEEEEECCCC--e--EEEEE-ec------CCCceEEEEEcCCCCEEEcccc
Q psy11015 303 D---GEQVITAS-W-------DRVANLFDVETG--T--ILQSL-TE------PGEAIRAAAGRTGGPIRASPLL 354 (360)
Q Consensus 303 ~---g~~l~tgs-~-------dg~i~iwd~~~~--~--~~~~l-~~------h~~~v~~~~~~~~g~~las~~~ 354 (360)
+ +.+|+... . ...|..|+...+ . ....+ .. .......++|.|+|.+.++..+
T Consensus 76 df~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 76 DFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp THHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 6 45554432 2 124555655432 1 11221 11 1122457999999987776544
No 331
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=89.04 E-value=0.72 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=24.7
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
+|+|.+.+.|..+|..|+.++..|.+.+
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 6889999999999999999998888765
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.94 E-value=3 Score=39.46 Aligned_cols=115 Identities=11% Similarity=-0.021 Sum_probs=69.9
Q ss_pred cCeEEEEEeeCCCEEEEEe-CCCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCcccccc-ceeEeeCCCCcEEEEEE
Q psy11015 223 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRT-PVKELLGHSNVVIAADW 300 (360)
Q Consensus 223 ~~v~~i~~~p~~~~l~s~s-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~i~~ 300 (360)
.....+.++|||++++.++ .+.++.|+|+.+-.....-. ...... ...... -.-.....+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k----------------~~~~~~~~~ae~e-~GlGPlHt~F 385 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK----------------LADPRDVIVGEPE-LGLGPLHTTF 385 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC----------------CSCGGGGEEECCB-CCSCEEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc----------------ccCcccceEeecc-CCCcccEEEE
Confidence 3456788999999876654 58899999987431110000 000001 111222 2345678899
Q ss_pred cCCCCEEEEEECCCcEEEEECCCC----------eEEEEEecCCCceEEEE-----EcCCCCEEEcccc
Q psy11015 301 LSDGEQVITASWDRVANLFDVETG----------TILQSLTEPGEAIRAAA-----GRTGGPIRASPLL 354 (360)
Q Consensus 301 sp~g~~l~tgs~dg~i~iwd~~~~----------~~~~~l~~h~~~v~~~~-----~~~~g~~las~~~ 354 (360)
.++|.-..|--.|..|.-|++... ..+..+..|-++-...+ -.++|+||++...
T Consensus 386 d~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 386 DGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp CSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred CCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 999944445557999999998643 45666776655433322 2678999887653
No 333
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.39 E-value=13 Score=31.96 Aligned_cols=60 Identities=0% Similarity=-0.036 Sum_probs=34.2
Q ss_pred EECCCCCEEEEEeCC--------------CcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEe--CCCcEEEEE
Q psy11015 187 AVRPGQPVLGSASAD--------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ 250 (360)
Q Consensus 187 ~~~~~~~~l~sgs~D--------------g~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s--~d~~i~vwd 250 (360)
-+++++..|+-+... ..|+..++..+....... . . +..|+++++.|+-.. .++.-.||.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 357778876666543 357777777665333222 1 1 236788888877655 344444444
Q ss_pred c
Q psy11015 251 A 251 (360)
Q Consensus 251 ~ 251 (360)
+
T Consensus 134 ~ 134 (302)
T 3s25_A 134 I 134 (302)
T ss_dssp E
T ss_pred E
Confidence 3
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.23 E-value=18 Score=33.33 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=36.0
Q ss_pred CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCC---eEEEEEe-----C----CCcCeEEEEEeeC
Q psy11015 180 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---KCVLQYS-----G----HSGSVNSVRFLPN 233 (360)
Q Consensus 180 ~~~V~~l~~~~~~~-~l~sgs~Dg~v~iwd~~~~---~~~~~~~-----~----h~~~v~~i~~~p~ 233 (360)
-..-+.|+|.|++. .|+.+...|.|++++.... ..+..+. + ..+....|+|+|+
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 34678999999986 4555677899999975422 1222221 1 1356889999996
No 335
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=86.94 E-value=1.1 Score=24.01 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=24.3
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|+|.+.+.|..+|..|+.++..|.+.+
T Consensus 3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 3 AQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4788999999999999999998887765
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.72 E-value=29 Score=35.23 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=32.7
Q ss_pred CeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCC
Q psy11015 224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNN 262 (360)
Q Consensus 224 ~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 262 (360)
.+.+++..++..++++-+.|+++|+|++.++........
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467778888888999999999999999999987766443
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.50 E-value=14 Score=31.43 Aligned_cols=62 Identities=6% Similarity=0.096 Sum_probs=35.1
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCC-----CcEEEEEcccC
Q psy11015 191 GQPVLGSASAD-----RTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D-----g~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d-----~~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||+.+..-.. .+.........+.+ ++.+++.|+.+ ..+.+||+.++
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 45677777665 458889987764221 11111111222223 66677777654 45888888765
No 338
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=85.85 E-value=1.4 Score=23.53 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=23.9
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
+|+|.+.+.|..+|..|+.++..|.+.+
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5788999999999999999988887654
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.56 E-value=9.1 Score=33.46 Aligned_cols=49 Identities=8% Similarity=-0.086 Sum_probs=24.0
Q ss_pred CcEEEEECCCCeE--EEEEeCCCcCeEEEEEeeCCCEEEEEeCC------CcEEEEEc
Q psy11015 202 RTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQA 251 (360)
Q Consensus 202 g~v~iwd~~~~~~--~~~~~~h~~~v~~i~~~p~~~~l~s~s~d------~~i~vwd~ 251 (360)
..+.+||..+.+- +..+..-...-.+++.. ++.+++.|+.+ ..+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 4788999887643 32222111110222222 56666666532 34566665
No 340
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=84.71 E-value=1.7 Score=23.34 Aligned_cols=28 Identities=18% Similarity=0.258 Sum_probs=23.9
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
+|+|.+.+.|..+|..|+.++..|...+
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 6788899999999999999988887654
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.20 E-value=9.6 Score=40.40 Aligned_cols=151 Identities=17% Similarity=0.192 Sum_probs=82.6
Q ss_pred eeeeeeecC----CCCEEEEEECCCCCEEEEEe-------CCCcEEEEECCCCeEEEEEeCCCcCeEEEEEe--eCCC-E
Q psy11015 171 YKIRSFSGH----RDGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL--PNKD-L 236 (360)
Q Consensus 171 ~~~~~l~~h----~~~V~~l~~~~~~~~l~sgs-------~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~--p~~~-~ 236 (360)
.+++.|.-| ...|.....+++.++++..| -.|.+.+|.++.+ ..+.+.||.+....+... +... +
T Consensus 137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceE
Confidence 344444444 34466667788888655433 3477888887644 234566776655444442 1112 2
Q ss_pred EEEEeC---CCcEEEEEcccCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEee---CCCCcEEEEEEcCCCCEEEEE
Q psy11015 237 VLSASG---DKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITA 310 (360)
Q Consensus 237 l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~i~~sp~g~~l~tg 310 (360)
++.+.. .++++|-++.....- .+ ... ...+..+. .-..-..++..++....+..-
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~------------~~------~f~-kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i 276 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTG------------NQ------PFP-KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 276 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccC------------CC------CCc-cccccccCCcccccCcceEEEeccccCEEEEE
Confidence 322222 267888877432000 00 000 00011111 123345577888888888888
Q ss_pred ECCCcEEEEECCCCeEEEEEecCCCceEEEE
Q psy11015 311 SWDRVANLFDVETGTILQSLTEPGEAIRAAA 341 (360)
Q Consensus 311 s~dg~i~iwd~~~~~~~~~l~~h~~~v~~~~ 341 (360)
+.-|.+++||+.||.++..-+....+|...+
T Consensus 277 tk~G~~~~~d~~t~~~i~~~ris~~~iF~~~ 307 (1630)
T 1xi4_A 277 TKYGYIHLYDLETGTCIYMNRISGETIFVTA 307 (1630)
T ss_pred ecCceEEEEecccchhhhhccccCCceEEec
Confidence 8999999999999988765544444444333
No 342
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=84.11 E-value=2.1 Score=23.13 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=24.0
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|+|.+.+.|..+|..|+.++..|.+.+
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5788999999999999999988887665
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.10 E-value=4.9 Score=40.92 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=33.5
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015 294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~ 331 (360)
.+.+++..++..+++|-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777888888999999999999999999999988753
No 344
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=83.79 E-value=3.1 Score=25.77 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
-|.|...+...+|.++..|..+|..|..++..|.+..
T Consensus 16 SR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 16 SRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567778899999999999999999999998887654
No 345
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=83.72 E-value=2.1 Score=23.10 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=24.1
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
+|+|.+.+.|..++..|+.++..|.+.+
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 5788999999999999999988887665
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.83 E-value=14 Score=36.08 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=37.6
Q ss_pred CCCCEEEEEeCCC--cEEEEECCCCeEEEEE-----eCCCcCeEEEEEeeC-CCEEEEEeC--C-----CcEEEEEcccC
Q psy11015 190 PGQPVLGSASADR--TVRLWSTQTGKCVLQY-----SGHSGSVNSVRFLPN-KDLVLSASG--D-----KSVHIWQAVIN 254 (360)
Q Consensus 190 ~~~~~l~sgs~Dg--~v~iwd~~~~~~~~~~-----~~h~~~v~~i~~~p~-~~~l~s~s~--d-----~~i~vwd~~~~ 254 (360)
.++.+++.||.++ .+.+||..+..-...- ........++.+..+ +.+++.|+. + ..+.+||+.++
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3677888887765 6889999876532211 101111223455544 556666765 2 34778888765
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.78 E-value=22 Score=30.41 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=33.5
Q ss_pred ECCCCCEEEEEeC----CC-------cEEEEECCCCeEEEE--EeCCCcCeEEEEEeeCCCEEEEEeCC-------CcEE
Q psy11015 188 VRPGQPVLGSASA----DR-------TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-------KSVH 247 (360)
Q Consensus 188 ~~~~~~~l~sgs~----Dg-------~v~iwd~~~~~~~~~--~~~h~~~v~~i~~~p~~~~l~s~s~d-------~~i~ 247 (360)
...++.+++.|+. ++ .+.+||..+.+-... +..-......+.+ ++.+++.|+.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3455667777873 12 177788877643221 1111111112222 66677777754 2366
Q ss_pred EEEcccC
Q psy11015 248 IWQAVIN 254 (360)
Q Consensus 248 vwd~~~~ 254 (360)
+||..++
T Consensus 131 ~yd~~~~ 137 (318)
T 2woz_A 131 CYDPVAA 137 (318)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 7777655
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.74 E-value=30 Score=33.67 Aligned_cols=63 Identities=10% Similarity=0.142 Sum_probs=36.2
Q ss_pred CCCEEEEEeCCC------cEEEEECCCCeEEE--EEeCCCcCeEEEEEeeCCCEEEEEeCCC--cEEEEEcccC
Q psy11015 191 GQPVLGSASADR------TVRLWSTQTGKCVL--QYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~Dg------~v~iwd~~~~~~~~--~~~~h~~~v~~i~~~p~~~~l~s~s~d~--~i~vwd~~~~ 254 (360)
++.+++.||.++ .+.+||..+..-.. .+..-... .+++...++.+++.|+.++ .+.+||..++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 566777777543 47788888753222 11111111 1222223777888877654 6888988765
No 349
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=82.57 E-value=2.5 Score=22.65 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=23.4
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|+|.+++.+..++..|..++..|.+.+
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 5788888999999999999888887654
No 350
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=82.07 E-value=26 Score=30.82 Aligned_cols=117 Identities=15% Similarity=0.195 Sum_probs=78.7
Q ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCC
Q psy11015 187 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDS 266 (360)
Q Consensus 187 ~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 266 (360)
-.+|..+.+|.-. ..++.|+|+++...++.+. ....|.-=.|-.+. .|+-. .+..|.-|++...
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~~-~L~lV-T~taVyHWs~~~~------------ 136 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALV-TDNAVYHWSMEGE------------ 136 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSS-EEEEE-ESSEEEEEESSTT------------
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCCC-eEEEE-cCCcEEEEcccCC------------
Confidence 3588888777766 6799999999999888887 45567766775333 34333 2456999998642
Q ss_pred CCCCCCCCCCCccccccceeEeeCCC----CcEEEEEEcCCCCEEEEEE-------CCCcEEEEECCCCeEEEEEecCCC
Q psy11015 267 DLDESKEPDESSITLRTPVKELLGHS----NVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTEPGE 335 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~i~~sp~g~~l~tgs-------~dg~i~iwd~~~~~~~~~l~~h~~ 335 (360)
..|...+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. -+.+.+|.+
T Consensus 137 ---------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa 200 (365)
T 2xzh_A 137 ---------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA 200 (365)
T ss_dssp ---------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE
T ss_pred ---------------CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeee
Confidence 12455555443 3577777788888875433 24789999987654 355666643
No 351
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=81.36 E-value=2.5 Score=22.80 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=23.6
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|+|.+.+.|..+|..|...+..|.+.+
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 5788889999999999999888887654
No 352
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=81.05 E-value=2.2 Score=23.30 Aligned_cols=29 Identities=24% Similarity=0.281 Sum_probs=23.6
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhccc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKLD 106 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~~ 106 (360)
.|+|.+.+.|..++..|..++..|...+.
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 57888888899999999988888876653
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.58 E-value=4.5 Score=42.15 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEe
Q psy11015 294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~ 331 (360)
.+.+++..++..+++|-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788999999999999999999999998864
No 354
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=80.36 E-value=2.6 Score=23.04 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=23.9
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhccc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKLD 106 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~~ 106 (360)
.|+|.+.+.|..++..|+.++..|.+.+.
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 57888888999999999998888877653
No 355
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=80.18 E-value=4.3 Score=25.89 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|.|.......++.+++.|..+|..|..+++.|.+.+
T Consensus 24 sR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 24 SRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888999999999999999999999998765
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.50 E-value=41 Score=30.93 Aligned_cols=29 Identities=7% Similarity=-0.040 Sum_probs=22.2
Q ss_pred cCeEEEEEeeCCC-EEEEEeCCCcEEEEEc
Q psy11015 223 GSVNSVRFLPNKD-LVLSASGDKSVHIWQA 251 (360)
Q Consensus 223 ~~v~~i~~~p~~~-~l~s~s~d~~i~vwd~ 251 (360)
...+.|+|.|+|. .++.+...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 3568999999996 4555678899998864
No 357
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=78.29 E-value=5.2 Score=25.26 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
-|.+.......++.+.+.|..+|..|..++..|....
T Consensus 16 ~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~ 52 (61)
T 1t2k_D 16 SRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEV 52 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778888999999999999999999998887654
No 358
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.68 E-value=37 Score=32.19 Aligned_cols=70 Identities=11% Similarity=-0.043 Sum_probs=50.1
Q ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEECCCC------e-------EEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEE
Q psy11015 183 VWDVAVRPGQPVLGSAS-ADRTVRLWSTQTG------K-------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs-~Dg~v~iwd~~~~------~-------~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~v 248 (360)
...+.++|||.+++.++ .+.+|.|+|++.- + ...... -.-.....+|.++|....|.--|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 34678999999666554 5789999998731 1 123333 2334678899999966666678999999
Q ss_pred EEccc
Q psy11015 249 WQAVI 253 (360)
Q Consensus 249 wd~~~ 253 (360)
|++..
T Consensus 404 Wni~~ 408 (638)
T 3sbq_A 404 WNMEE 408 (638)
T ss_dssp EEHHH
T ss_pred EeccH
Confidence 99864
No 359
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=77.43 E-value=5.7 Score=25.30 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 70 KFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 70 ~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
|.+.......++.+.+.|..+|..|..++..|....
T Consensus 18 R~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~ 53 (63)
T 2wt7_A 18 RNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEK 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888999999999999999999998887654
No 360
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=75.75 E-value=4.2 Score=25.35 Aligned_cols=32 Identities=22% Similarity=0.567 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhc
Q psy11015 73 LNSLFSQIEREFELLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 73 l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~ 104 (360)
...+..++..+++.+..+|.+|+++++.+.+.
T Consensus 25 VD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 25 VNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44566777888889999999999998777653
No 361
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=75.33 E-value=7 Score=24.75 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|.+..+...+++.+.+.|..+|..|..++..|....
T Consensus 16 ~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~ 52 (62)
T 1jnm_A 16 SRKRKLERIARLEEKVKTLKAQNSELASTANMLREQV 52 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567778889999999999999999999998887764
No 362
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=74.54 E-value=5.9 Score=26.48 Aligned_cols=40 Identities=23% Similarity=0.165 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcccccccc
Q psy11015 72 KLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESII 111 (360)
Q Consensus 72 ~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~~~~~~~ 111 (360)
.-..-..+++...+.|..+|..|+.+++.|...+.....+
T Consensus 33 krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~l 72 (78)
T 1gu4_A 33 KAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555667788899999999999999988766544433
No 363
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=72.78 E-value=9.5 Score=24.25 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcccc
Q psy11015 69 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDR 107 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~~~ 107 (360)
.|.+.......++.+.+.|..+|..|..++..|.....+
T Consensus 17 ~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~ 55 (63)
T 1ci6_A 17 YRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQY 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888899999999999999999888765433
No 364
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=72.19 E-value=6.4 Score=21.24 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=22.3
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.|+|.+.+.+..++..+..++..+.+.+
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 5778888888888888888887777655
No 365
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=72.12 E-value=4.6 Score=20.40 Aligned_cols=23 Identities=30% Similarity=0.361 Sum_probs=15.5
Q ss_pred HHHHHhHHhhhhHHHHHHHHhhc
Q psy11015 82 REFELLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 82 ~e~~~l~~e~~~l~~~~~~l~~~ 104 (360)
.-+..++.||..|..++++|...
T Consensus 6 allasleaenkqlkakveellak 28 (31)
T 1p9i_A 6 ALLASLEAENKQLKAKVEELLAK 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667788888888777654
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=71.82 E-value=48 Score=29.27 Aligned_cols=59 Identities=7% Similarity=-0.076 Sum_probs=29.6
Q ss_pred CcEEEEEEcCC-CCEEEEEECCCcEEEEECCCCeEEEEEec-C------------CCceEEEEEcCC--CCEEEcc
Q psy11015 293 NVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQSLTE-P------------GEAIRAAAGRTG--GPIRASP 352 (360)
Q Consensus 293 ~~v~~i~~sp~-g~~l~tgs~dg~i~iwd~~~~~~~~~l~~-h------------~~~v~~~~~~~~--g~~las~ 352 (360)
..+.++.+.|. ...++.+..++-|...+ ..|+.-..+.. . ...+.+++++|. +.+.+..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 46788989873 34454454444343332 22221122210 0 134888999886 5555543
No 367
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=71.67 E-value=62 Score=29.73 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=78.4
Q ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCC
Q psy11015 186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDND 265 (360)
Q Consensus 186 l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~ 265 (360)
.-.+|..+.+|.-. ..++.|||+++...++.+.- ...|.-=.|-.+. .|+-. .+..|.-|++...
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~----------- 135 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALV-TDNAVYHWSMEGE----------- 135 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEE-CSSEEEEEESSSS-----------
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEE-cCCeeEEecccCC-----------
Confidence 34688887777765 67999999999998888873 4456666675443 33332 4567999998642
Q ss_pred CCCCCCCCCCCCccccccceeEeeCCC----CcEEEEEEcCCCCEEEEEE-------CCCcEEEEECCCCeEEEEEecCC
Q psy11015 266 SDLDESKEPDESSITLRTPVKELLGHS----NVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTEPG 334 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~i~~sp~g~~l~tgs-------~dg~i~iwd~~~~~~~~~l~~h~ 334 (360)
..|...+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. -+.+.+|.
T Consensus 136 ----------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGha 198 (494)
T 1bpo_A 136 ----------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA 198 (494)
T ss_dssp ----------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSE
T ss_pred ----------------CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeee
Confidence 12455555543 4577777788888876433 24789999987554 35555554
Q ss_pred C
Q psy11015 335 E 335 (360)
Q Consensus 335 ~ 335 (360)
+
T Consensus 199 a 199 (494)
T 1bpo_A 199 A 199 (494)
T ss_dssp E
T ss_pred e
Confidence 3
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.50 E-value=8 Score=37.72 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=30.4
Q ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec
Q psy11015 294 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~ 332 (360)
.|.++.+ +..+++|-+.|.++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 578999999999999999999999887754
No 369
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=71.38 E-value=5.8 Score=27.12 Aligned_cols=40 Identities=20% Similarity=0.113 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhccccccccc
Q psy11015 73 LNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIIN 112 (360)
Q Consensus 73 l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~~~~~~~~ 112 (360)
-+.-..+++.+.+.|..+|..|+.++++|...+.....+.
T Consensus 34 rk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll 73 (87)
T 1hjb_A 34 AKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677888999999999999999887765554444
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.39 E-value=3.7 Score=42.79 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=32.3
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS 219 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~ 219 (360)
.+.+++..++..++++-+.|+++|||++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667778899999999999999999999998864
No 371
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=69.58 E-value=34 Score=29.33 Aligned_cols=63 Identities=2% Similarity=-0.144 Sum_probs=37.1
Q ss_pred EECCCCCEEEEEe--CCC--cEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeC-CCcEEEEEcccC
Q psy11015 187 AVRPGQPVLGSAS--ADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQAVIN 254 (360)
Q Consensus 187 ~~~~~~~~l~sgs--~Dg--~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~-d~~i~vwd~~~~ 254 (360)
.|+++++.|+-.. .++ .|..-++... ....+..+.. ..|+|+++.|+-.+. ...|.+-++..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 5677788777665 333 4555555533 3344443432 456778877764444 567777776654
No 372
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=69.52 E-value=40 Score=29.17 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=31.0
Q ss_pred CCCEEEEEeCC-CcEEEEECCC--C--eEEEEEe-CCCcCeEEEEEeeCCCEEEEEeC-C---------CcEEEEEcccC
Q psy11015 191 GQPVLGSASAD-RTVRLWSTQT--G--KCVLQYS-GHSGSVNSVRFLPNKDLVLSASG-D---------KSVHIWQAVIN 254 (360)
Q Consensus 191 ~~~~l~sgs~D-g~v~iwd~~~--~--~~~~~~~-~h~~~v~~i~~~p~~~~l~s~s~-d---------~~i~vwd~~~~ 254 (360)
++.+++.|+.+ ..+.+||+.+ . ..+..+. .-......+.+ ++.+++.|+. + ..+.+||+.++
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 35455555543 4688888863 2 2222222 11111122222 5666666665 2 35778887765
No 373
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.80 E-value=94 Score=30.28 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=79.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEe----C-CCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----G-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~----~-h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
..|.++... ++ .|..|+.+ .+..+|..+++.. .+. + ....|.++...++|.+.+ |+.+| +..++..++.
T Consensus 103 ~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~ 176 (758)
T 3ott_A 103 TDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGK 176 (758)
T ss_dssp SCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTE
T ss_pred ceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCc
Confidence 357776543 44 55556655 6778898766533 331 1 124588888877776554 55544 6677766542
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEecCCC
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~h~~ 335 (360)
.... .. +. ........|.++...+++..|..|+. +-+..+|..+++..........
T Consensus 177 ~~~~-~~---------------------~~-~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~ 232 (758)
T 3ott_A 177 FEGI-PL---------------------PV-HSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNN 232 (758)
T ss_dssp EEEE-CC---------------------CC-CTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEE
T ss_pred eEEe-cC---------------------CC-ccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCC
Confidence 1110 00 00 00001234788877776765555553 4578899877754322111234
Q ss_pred ceEEEEEcCCCCEEEcc
Q psy11015 336 AIRAAAGRTGGPIRASP 352 (360)
Q Consensus 336 ~v~~~~~~~~g~~las~ 352 (360)
.|.++...++|.+.++.
T Consensus 233 ~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 233 SIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred eEEEEEEcCCCCEEEEe
Confidence 68888888877755544
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.60 E-value=11 Score=36.70 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=30.1
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy11015 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG 220 (360)
Q Consensus 182 ~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~ 220 (360)
.|.++.+. ..++++-+.|+++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555554 66999999999999999999998888753
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.21 E-value=27 Score=33.33 Aligned_cols=58 Identities=16% Similarity=0.044 Sum_probs=41.6
Q ss_pred cEEEEEEcCCCCEEEEEECC------------CcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEc
Q psy11015 294 VVIAADWLSDGEQVITASWD------------RVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRAS 351 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~d------------g~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las 351 (360)
..-.|+|+|.|++++.-..+ ..+.+.+..+++....+.++ ..+++.++|+|+++.++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 34568999999866643322 23556677778877767664 579999999999987764
No 376
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=62.00 E-value=2 Score=21.23 Aligned_cols=19 Identities=42% Similarity=0.448 Sum_probs=11.8
Q ss_pred HhHHhhhhHHHHHHHHhhc
Q psy11015 86 LLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 86 ~l~~e~~~l~~~~~~l~~~ 104 (360)
.|+.||..|.+++..|...
T Consensus 4 alefendaleqkiaalkqk 22 (28)
T 3ra3_A 4 ALEFENDALEQKIAALKQK 22 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccHHHHHHHHHHHHH
Confidence 4556677777766666544
No 377
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=56.51 E-value=8.4 Score=23.55 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=14.8
Q ss_pred HHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 82 REFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 82 ~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
.+++.|..||.+|+.+++.|.+..
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~ 42 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEEN 42 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666666666666665544
No 378
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=54.21 E-value=46 Score=29.16 Aligned_cols=29 Identities=7% Similarity=0.074 Sum_probs=26.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy11015 192 QPVLGSASADRTVRLWSTQTGKCVLQYSG 220 (360)
Q Consensus 192 ~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~ 220 (360)
+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 45889999999999999999999999863
No 379
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.40 E-value=55 Score=31.18 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=40.0
Q ss_pred EEEEEECCCCCEEEEEeCC------------CcEEEEECCCCeEEEEEeCCC-cCeEEEEEeeCCCEEEEE
Q psy11015 183 VWDVAVRPGQPVLGSASAD------------RTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 183 V~~l~~~~~~~~l~sgs~D------------g~v~iwd~~~~~~~~~~~~h~-~~v~~i~~~p~~~~l~s~ 240 (360)
.--|+|+|.|.+++.-..+ ..+.+.+..+++....+.+.. ..++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3567899999866554322 235566777777766666544 569999999998876654
No 380
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=52.93 E-value=22 Score=18.19 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=20.7
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~ 104 (360)
.++|+|....+.||-.|.+++.+|...
T Consensus 4 aqlekevaqaeaenyqleqevaqlehe 30 (33)
T 1fmh_A 4 AQLEKEVAQAEAENYQLEQEVAQLEHE 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 467888888888888888888777543
No 381
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=51.87 E-value=23 Score=19.82 Aligned_cols=22 Identities=41% Similarity=0.437 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhHHhhhhHHHH
Q psy11015 76 LFSQIEREFELLYLENLNLQDK 97 (360)
Q Consensus 76 l~~~~e~e~~~l~~e~~~l~~~ 97 (360)
|..|+|.|...++.||..|.++
T Consensus 4 lvaqlenevaslenenetlkkk 25 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKK 25 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHHHHh
Confidence 3445555555555555554443
No 382
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=50.17 E-value=1.9e+02 Score=28.10 Aligned_cols=137 Identities=9% Similarity=0.052 Sum_probs=80.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCeEEEEE-eCC----CcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCe
Q psy11015 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGH----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 255 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~-~~h----~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~ 255 (360)
..|.++....++.+.+ |+.+ -+..++..++...... ... ...|.++...+++..|..|+. +-+..+|..++.
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4688888888876544 4444 4777888776533211 111 124888888777776555654 347778866542
Q ss_pred eEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECCCCeEEEEEec---
Q psy11015 256 ECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE--- 332 (360)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~~~~~~~~l~~--- 332 (360)
.. ....+ ....|.++...++|...+ |+.+ -+.+++..++... .+..
T Consensus 223 ~~--------------------------~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~-~~~~~~~ 271 (758)
T 3ott_A 223 IK--------------------------QTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQ-HIIHDSR 271 (758)
T ss_dssp EE--------------------------EEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCE-EECCCTT
T ss_pred EE--------------------------eccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEE-EEEcCCC
Confidence 11 01111 123578888777776654 4444 4788887765432 2221
Q ss_pred -----CCCceEEEEEcCCCC-EEEc
Q psy11015 333 -----PGEAIRAAAGRTGGP-IRAS 351 (360)
Q Consensus 333 -----h~~~v~~~~~~~~g~-~las 351 (360)
....|.++....+|. |+.|
T Consensus 272 ~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 272 NIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp CTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 234688888887776 4444
No 383
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.05 E-value=80 Score=29.97 Aligned_cols=59 Identities=14% Similarity=0.020 Sum_probs=41.7
Q ss_pred cEEEEEEcCCCCEEEEEEC------------CCcEEEEECCCCeEEEEEecC-CCceEEEEEcCCCCEEEcc
Q psy11015 294 VVIAADWLSDGEQVITASW------------DRVANLFDVETGTILQSLTEP-GEAIRAAAGRTGGPIRASP 352 (360)
Q Consensus 294 ~v~~i~~sp~g~~l~tgs~------------dg~i~iwd~~~~~~~~~l~~h-~~~v~~~~~~~~g~~las~ 352 (360)
....+.|.++|.+.+.... ...+..++..+|+....+..+ ...++.++|+||+..|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4678999999987773221 125667777778866666544 4679999999999877643
No 384
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=46.27 E-value=52 Score=35.11 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=67.8
Q ss_pred ECCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCCCCCC
Q psy11015 188 VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNNDNDSD 267 (360)
Q Consensus 188 ~~~~~~~l~sgs~Dg~v~iwd~~~~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 267 (360)
.+|..+.++.-+ ..++.|||+++...++.+. ....|.-=.|-... .|+-. .+..|..|++....
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~-~l~lV-T~~aVyHW~~~~~s------------ 136 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALV-TDNAVYHWSMEGES------------ 136 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccc-cCCCceEEEecCCC-eeEEE-cCCeEEEeccCCCC------------
Confidence 678877776664 6799999999887777766 34456666665333 33322 34569999985321
Q ss_pred CCCCCCCCCCccccccceeEeeCC----CCcEEEEEEcCCCCEEEEEE-------CCCcEEEEECCCC
Q psy11015 268 LDESKEPDESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITAS-------WDRVANLFDVETG 324 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~i~~sp~g~~l~tgs-------~dg~i~iwd~~~~ 324 (360)
.|...+..| ...|..-..+++.++++..| -.|.+.+|.+..+
T Consensus 137 ---------------~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 137 ---------------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred ---------------ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 133333333 34566667788888876433 3588999998754
No 385
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=45.60 E-value=34 Score=22.22 Aligned_cols=36 Identities=11% Similarity=0.044 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhh
Q psy11015 68 SVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLME 103 (360)
Q Consensus 68 ~~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~ 103 (360)
.+|.|.......+|.++..+..++..+....+.|..
T Consensus 22 afReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~ 57 (70)
T 1gd2_E 22 AFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQ 57 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777776666665555554444444443
No 386
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=44.97 E-value=98 Score=29.35 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=42.0
Q ss_pred CCEEEEEECCCCCEEEEEeC------------CCcEEEEECCCCeEEEEEeCC-CcCeEEEEEeeCCCEEEEE
Q psy11015 181 DGVWDVAVRPGQPVLGSASA------------DRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSA 240 (360)
Q Consensus 181 ~~V~~l~~~~~~~~l~sgs~------------Dg~v~iwd~~~~~~~~~~~~h-~~~v~~i~~~p~~~~l~s~ 240 (360)
.....|.|.++|.+.+.... ...|..++..+++....+.+. ...++.++|+||++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34678999999987663221 125666777778766666543 3568999999999877665
No 387
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=42.70 E-value=41 Score=18.35 Aligned_cols=24 Identities=33% Similarity=0.317 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhHH
Q psy11015 72 KLNSLFSQIEREFELLYLENLNLQ 95 (360)
Q Consensus 72 ~l~~l~~~~e~e~~~l~~e~~~l~ 95 (360)
+|+.-..+-.+++..|..+|.+|.
T Consensus 11 kLhk~ie~KdeeIa~Lk~eN~eL~ 34 (37)
T 1t6f_A 11 KLHKEIEQKDNEIARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHH
Confidence 444444444456666666665554
No 388
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=39.49 E-value=3.5e+02 Score=28.14 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=50.3
Q ss_pred CCCEEEEEECCC------CCEEEEEeC-CCcEEEEECCCCeEEEEEeC-CCcCeEEEEEee--CCCEEEEEeCCCcEEEE
Q psy11015 180 RDGVWDVAVRPG------QPVLGSASA-DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLP--NKDLVLSASGDKSVHIW 249 (360)
Q Consensus 180 ~~~V~~l~~~~~------~~~l~sgs~-Dg~v~iwd~~~~~~~~~~~~-h~~~v~~i~~~p--~~~~l~s~s~d~~i~vw 249 (360)
.+.|.|+++.|. +.+++.|.. |++|+|+++.+.+.+....- -.....++.+.. ...++..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 468999998763 358999996 99999999987665543321 123455555543 23478888899987666
Q ss_pred Ecc
Q psy11015 250 QAV 252 (360)
Q Consensus 250 d~~ 252 (360)
.+.
T Consensus 633 ~~d 635 (1158)
T 3ei3_A 633 GLN 635 (1158)
T ss_dssp EEC
T ss_pred EEc
Confidence 543
No 389
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=36.75 E-value=46 Score=17.17 Aligned_cols=24 Identities=29% Similarity=0.365 Sum_probs=13.6
Q ss_pred HHHHHHHhHHhhhhHHHHHHHHhh
Q psy11015 80 IEREFELLYLENLNLQDKIDMLME 103 (360)
Q Consensus 80 ~e~e~~~l~~e~~~l~~~~~~l~~ 103 (360)
+|++.-.|..--.+|+++++.|.+
T Consensus 4 lee~~r~l~~ivq~lq~r~drle~ 27 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLEE 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555566666665554
No 390
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=32.82 E-value=71 Score=18.22 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhHHhhhhHHHHHHHHhhc
Q psy11015 76 LFSQIEREFELLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 76 l~~~~e~e~~~l~~e~~~l~~~~~~l~~~ 104 (360)
-...+..|+.+.+.....|+++..+|.+.
T Consensus 10 kI~kVdrEI~Kte~kI~~lqkKlkeLee~ 38 (42)
T 2l5g_B 10 NMDRVDREITMVEQQISKLKKKQQQLEEE 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455668888888889999998888764
No 391
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=30.87 E-value=52 Score=21.10 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=14.5
Q ss_pred HHHHHHHHhHHhhhhHHHHHHHHh
Q psy11015 79 QIEREFELLYLENLNLQDKIDMLM 102 (360)
Q Consensus 79 ~~e~e~~~l~~e~~~l~~~~~~l~ 102 (360)
.++.|+-.+..||.-|++++..+.
T Consensus 50 rLNDEiislNIENNlL~~rl~~l~ 73 (75)
T 3a7o_A 50 RLNDELISGTIENNVLQQKLSDLK 73 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---
T ss_pred HhhHHHHHhHHHHHHHHHHHHHHh
Confidence 344566777777777877775553
No 392
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=30.83 E-value=52 Score=16.02 Aligned_cols=17 Identities=35% Similarity=0.518 Sum_probs=7.6
Q ss_pred hHHhhhhHHHHHHHHhh
Q psy11015 87 LYLENLNLQDKIDMLME 103 (360)
Q Consensus 87 l~~e~~~l~~~~~~l~~ 103 (360)
++.|-..|++++..|+.
T Consensus 6 lykeledlqerlrklrk 22 (27)
T 3twe_A 6 LYKELEDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444443
No 393
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=29.74 E-value=90 Score=20.83 Aligned_cols=18 Identities=28% Similarity=0.289 Sum_probs=9.1
Q ss_pred HHHHhHHhhhhHHHHHHH
Q psy11015 83 EFELLYLENLNLQDKIDM 100 (360)
Q Consensus 83 e~~~l~~e~~~l~~~~~~ 100 (360)
|++.|..+|..|....++
T Consensus 28 EieELKekN~~L~~e~~e 45 (81)
T 2jee_A 28 EIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555555555554444433
No 394
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=29.07 E-value=62 Score=16.39 Aligned_cols=21 Identities=10% Similarity=0.233 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHHhHH
Q psy11015 69 VKFKLNSLFSQIEREFELLYL 89 (360)
Q Consensus 69 ~~~~l~~l~~~~e~e~~~l~~ 89 (360)
+|.||+++...+.+++.++-.
T Consensus 2 lrkrlrkfrnkikeklkkigq 22 (32)
T 1lyp_A 2 LRKRLRKFRNKIKEKLKKIGQ 22 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 466777777777766655433
No 395
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=28.98 E-value=1e+02 Score=18.71 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhccc
Q psy11015 71 FKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 106 (360)
Q Consensus 71 ~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~~ 106 (360)
.||++.-.++-.++..|+..+.+..++++.|+..+.
T Consensus 14 ~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLk 49 (58)
T 3a2a_A 14 LRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLR 49 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666777777777777777777766553
No 396
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=27.91 E-value=1.3e+02 Score=19.83 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhh
Q psy11015 72 KLNSLFSQIEREFELLYLENLNLQDKIDMLME 103 (360)
Q Consensus 72 ~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~ 103 (360)
+|..+...++.|-..+.....-|+.+.++|..
T Consensus 43 KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~ 74 (78)
T 3iv1_A 43 KLEEMVTRLDQEVAEVDKNIELLKKKDEELSS 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444555444443
No 397
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=27.63 E-value=66 Score=16.19 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=12.1
Q ss_pred HHHHHHHHhHHhhhhHHHHHHHH
Q psy11015 79 QIEREFELLYLENLNLQDKIDML 101 (360)
Q Consensus 79 ~~e~e~~~l~~e~~~l~~~~~~l 101 (360)
.+|++...++..-..|.++++.|
T Consensus 5 alekkcaalesklqalekkleal 27 (31)
T 3ljm_A 5 ALEKKCAALESKLQALEKKLEAL 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555554
No 398
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=27.21 E-value=1.2e+02 Score=20.40 Aligned_cols=23 Identities=26% Similarity=0.278 Sum_probs=13.8
Q ss_pred HHHHHHHhHHhhhhHHHHHHHHh
Q psy11015 80 IEREFELLYLENLNLQDKIDMLM 102 (360)
Q Consensus 80 ~e~e~~~l~~e~~~l~~~~~~l~ 102 (360)
++.+.+.|..+|..|..++++|.
T Consensus 64 l~~~~~~L~~~n~~L~~rl~~L~ 86 (88)
T 1nkp_A 64 LISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 33455566666777776666553
No 399
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=27.05 E-value=1.3e+02 Score=20.03 Aligned_cols=19 Identities=21% Similarity=0.024 Sum_probs=7.7
Q ss_pred HHHhHHhhhhHHHHHHHHh
Q psy11015 84 FELLYLENLNLQDKIDMLM 102 (360)
Q Consensus 84 ~~~l~~e~~~l~~~~~~l~ 102 (360)
++.+..++..+++..+.|+
T Consensus 55 ie~l~eEi~~lk~en~eL~ 73 (83)
T 1uii_A 55 IEQKDNEIARLKKENKELA 73 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444433
No 400
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=27.01 E-value=93 Score=17.70 Aligned_cols=21 Identities=29% Similarity=0.249 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHhHHhhhhHHH
Q psy11015 76 LFSQIEREFELLYLENLNLQD 96 (360)
Q Consensus 76 l~~~~e~e~~~l~~e~~~l~~ 96 (360)
-..++|+.+..|..||.-|++
T Consensus 18 ~naeLEervstLq~EN~mLRq 38 (42)
T 2oqq_A 18 KNSELEERLSTLQNENQMLRH 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344455555555555555544
No 401
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=25.86 E-value=1.7e+02 Score=20.30 Aligned_cols=46 Identities=20% Similarity=0.135 Sum_probs=31.4
Q ss_pred CCcccCChhhHHH-HHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 60 YDDVVLPSSVKFK-LNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 60 ~~~~~~~~~~~~~-l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
++.+.+|++-|.+ |..-...++++++.......-|.+......+.+
T Consensus 6 ~d~s~LPpeqRkkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP 52 (98)
T 2ke4_A 6 EDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTP 52 (98)
T ss_dssp SCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCG
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4567788877765 777777777777777666666766665555554
No 402
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=25.55 E-value=1.3e+02 Score=19.52 Aligned_cols=27 Identities=19% Similarity=0.147 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhHHhhhhHHHHHHHHhh
Q psy11015 77 FSQIEREFELLYLENLNLQDKIDMLME 103 (360)
Q Consensus 77 ~~~~e~e~~~l~~e~~~l~~~~~~l~~ 103 (360)
...+|.++.....+..+|+.+++.++.
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444444445555555555544433
No 403
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=25.27 E-value=35 Score=29.58 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=30.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhc
Q psy11015 64 VLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEK 104 (360)
Q Consensus 64 ~~~~~~~~~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~ 104 (360)
.+..++..++.+++...+.+++.+..++.+|++++++|+..
T Consensus 167 ~~~~e~~~~~~~~~n~~~~eie~L~~~~~~L~eEi~~Le~~ 207 (315)
T 2ve7_A 167 EMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQE 207 (315)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667777777666778888888888888888888654
No 404
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=24.47 E-value=3.5e+02 Score=23.48 Aligned_cols=46 Identities=9% Similarity=0.061 Sum_probs=23.9
Q ss_pred EEEEEeCCCcEEEEECCC-CeEEEEE--eCCCcCeEEEEEee--CCCEEEEE
Q psy11015 194 VLGSASADRTVRLWSTQT-GKCVLQY--SGHSGSVNSVRFLP--NKDLVLSA 240 (360)
Q Consensus 194 ~l~sgs~Dg~v~iwd~~~-~~~~~~~--~~h~~~v~~i~~~p--~~~~l~s~ 240 (360)
.|..|...| +.+++... +..-..+ ......|.+|++.| .+.+++.+
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~ 74 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA 74 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe
Confidence 666677666 44444322 2211111 12235699999998 45444443
No 405
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.96 E-value=3.3e+02 Score=23.10 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=67.6
Q ss_pred CCCEEEEEeCCCcEEEEECCC-------CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcccCeeEeeeCCC
Q psy11015 191 GQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVSNND 263 (360)
Q Consensus 191 ~~~~l~sgs~Dg~v~iwd~~~-------~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 263 (360)
+...++.++..|.++--.+.. |.....+.. ...+..+.....+..++..+.+|.+..+....-...
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~------ 185 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLT------ 185 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC------
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHcccc------
Confidence 355788899999999887642 223333443 455666666555667888899999988876531000
Q ss_pred CCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy11015 264 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~~ 322 (360)
.....+.....+.. ...|.++....++..+++.+..|..+..++.
T Consensus 186 -------------gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 186 -------------NRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp -------------CTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred -------------CCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 00011111222222 3456666555566788889999998888763
No 406
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.50 E-value=3.2e+02 Score=22.74 Aligned_cols=121 Identities=8% Similarity=-0.036 Sum_probs=70.7
Q ss_pred CCCEEEEEECC-CCCEEEEEeCCCcEEEEECCC------CeEEEEEeCCCcCeEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q psy11015 180 RDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT------GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252 (360)
Q Consensus 180 ~~~V~~l~~~~-~~~~l~sgs~Dg~v~iwd~~~------~~~~~~~~~h~~~v~~i~~~p~~~~l~s~s~d~~i~vwd~~ 252 (360)
...|.++.... +...++.++.+|.++-..+.. |.....+.. ...+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 44565554321 456899999999999887653 222222332 2345555555556678888889988887754
Q ss_pred cCeeEeeeCCCCCCCCCCCCCCCCCccccccceeEeeCCCCcEEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy11015 253 INWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~g~~l~tgs~dg~i~iwd~ 321 (360)
.-... .....+.....+.. ...|.++...+++.+++..+..|.++...+
T Consensus 146 eip~~-------------------gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 146 EVPPS-------------------TPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp GSCBC-------------------CTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred hCCCc-------------------CCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 21000 00001111112322 245656555556778999999999888875
No 407
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=23.08 E-value=1.1e+02 Score=20.17 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhHHhhhhHHHHHHHHhh
Q psy11015 77 FSQIEREFELLYLENLNLQDKIDMLME 103 (360)
Q Consensus 77 ~~~~e~e~~~l~~e~~~l~~~~~~l~~ 103 (360)
...+..+.+.+..+...|.++...|..
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~ 75 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQ 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444443
No 408
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=22.63 E-value=1.2e+02 Score=17.88 Aligned_cols=23 Identities=13% Similarity=0.297 Sum_probs=16.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHH
Q psy11015 67 SSVKFKLNSLFSQIEREFELLYL 89 (360)
Q Consensus 67 ~~~~~~l~~l~~~~e~e~~~l~~ 89 (360)
.++-..+..|+.++...|+.+..
T Consensus 5 ~dLt~~vq~LL~qmq~kFq~mS~ 27 (48)
T 3ci9_A 5 QDLTSVVQTLLQQMQDKFQTISD 27 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788888888776643
No 409
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=22.61 E-value=1e+02 Score=21.47 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=19.3
Q ss_pred HHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 78 SQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 78 ~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
..+.++++.|..|+.+|.++++.|...+
T Consensus 15 ~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 15 DTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777777888887777776654
No 410
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=22.35 E-value=1.8e+02 Score=19.47 Aligned_cols=28 Identities=29% Similarity=0.164 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhHHHHH
Q psy11015 71 FKLNSLFSQIEREFELLYLENLNLQDKI 98 (360)
Q Consensus 71 ~~l~~l~~~~e~e~~~l~~e~~~l~~~~ 98 (360)
..|..|...++.+++.-..+..++++.+
T Consensus 40 EqL~~LKkkl~~el~~h~~ei~~le~~i 67 (84)
T 1gmj_A 40 EQLAALKKHKENEISHHAKEIERLQKEI 67 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555544444444433333343333
No 411
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=22.29 E-value=1.8e+02 Score=19.29 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhHHHHHHHH
Q psy11015 72 KLNSLFSQIEREFELLYLENLNLQDKIDML 101 (360)
Q Consensus 72 ~l~~l~~~~e~e~~~l~~e~~~l~~~~~~l 101 (360)
+|+.-..+.+.++..|..+|..|.+-.++.
T Consensus 38 ~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~ 67 (79)
T 2zxx_A 38 KLHKEIEQKDSEIARLRKENKDLAEVAEHV 67 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556667777777777766654443
No 412
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=21.94 E-value=1.4e+02 Score=19.79 Aligned_cols=33 Identities=15% Similarity=0.026 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhHHhhhhHHHHHHHHhhcc
Q psy11015 73 LNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 105 (360)
Q Consensus 73 l~~l~~~~e~e~~~l~~e~~~l~~~~~~l~~~~ 105 (360)
-.++...++.+...+..+...|+.+.+.|...+
T Consensus 45 A~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 45 AKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666666666766666665543
No 413
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=21.70 E-value=1.7e+02 Score=25.79 Aligned_cols=43 Identities=19% Similarity=-0.010 Sum_probs=23.2
Q ss_pred CCcccCChhhHHHHHHHH---HHHHHHHHHhHHhhhhHHHHHHHHh
Q psy11015 60 YDDVVLPSSVKFKLNSLF---SQIEREFELLYLENLNLQDKIDMLM 102 (360)
Q Consensus 60 ~~~~~~~~~~~~~l~~l~---~~~e~e~~~l~~e~~~l~~~~~~l~ 102 (360)
..++.+|++++.|+..|. .++.+-......+..+|++++..+.
T Consensus 42 ~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~ 87 (359)
T 3fs3_A 42 DKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLY 87 (359)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356889999997766543 3333322333445556666665443
No 414
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=21.70 E-value=1.4e+02 Score=17.74 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=13.2
Q ss_pred HHHHHHHHhHHhhhhHHHHHHHH
Q psy11015 79 QIEREFELLYLENLNLQDKIDML 101 (360)
Q Consensus 79 ~~e~e~~~l~~e~~~l~~~~~~l 101 (360)
|+-...+.|..||..|++++++-
T Consensus 7 QL~~QVe~Lk~ENshLrrEL~dN 29 (54)
T 1deb_A 7 QLLKQVEALKMENSNLRQELEDN 29 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHhh
Confidence 44445556666666666665443
No 415
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=20.11 E-value=2e+02 Score=19.16 Aligned_cols=26 Identities=31% Similarity=0.319 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhHHHH
Q psy11015 72 KLNSLFSQIEREFELLYLENLNLQDK 97 (360)
Q Consensus 72 ~l~~l~~~~e~e~~~l~~e~~~l~~~ 97 (360)
+|++...++++++..+..+|.+|++-
T Consensus 42 ~Lh~~ie~~~eEi~~Lk~en~~L~el 67 (83)
T 1wlq_A 42 KLHKEIEQKDSEIARLRKENKDLAEV 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555566666666666666553
Done!