Your job contains 1 sequence.
>psy11015
MVESDPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEY
DDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECND
MECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHR
DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA
SGDKSVHIWQAVINWECLVSNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW
LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRASPLLLAIRSK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11015
(360 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038617 - symbol:CG12333 species:7227 "Drosophila ... 502 2.0e-53 2
MGI|MGI:1920393 - symbol:Wdr37 "WD repeat domain 37" spec... 519 7.4e-50 1
ZFIN|ZDB-GENE-030131-8101 - symbol:wdr37 "WD repeat domai... 495 2.6e-47 1
UNIPROTKB|B5DG67 - symbol:wdr12 "Ribosome biogenesis prot... 206 2.7e-14 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 185 4.8e-14 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 185 4.8e-14 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 193 9.6e-13 1
ZFIN|ZDB-GENE-030131-371 - symbol:wdr12 "WD repeat domain... 191 1.6e-12 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 190 2.1e-12 1
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 189 2.8e-12 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 186 3.4e-12 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 186 5.8e-12 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 186 5.8e-12 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 186 5.8e-12 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 186 5.8e-12 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 186 5.8e-12 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 186 5.8e-12 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 186 5.8e-12 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 186 5.8e-12 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 186 5.8e-12 1
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 186 5.8e-12 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 185 7.6e-12 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 183 1.3e-11 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 183 1.4e-11 1
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 180 3.1e-11 1
UNIPROTKB|E2RNA4 - symbol:WDR12 "Uncharacterized protein"... 179 4.1e-11 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 159 4.7e-11 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 165 8.6e-11 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 176 8.7e-11 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 163 9.9e-11 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 175 1.1e-10 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 163 1.6e-10 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 163 1.6e-10 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 163 1.6e-10 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 163 1.6e-10 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 163 1.6e-10 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 163 1.6e-10 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 155 1.7e-10 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 163 1.9e-10 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 172 2.1e-10 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 149 2.3e-10 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 183 2.5e-10 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 179 2.5e-10 1
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 171 3.4e-10 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 176 3.5e-10 1
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 139 5.9e-10 2
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 139 5.9e-10 2
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 173 6.0e-10 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 148 6.3e-10 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 172 6.3e-10 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 167 6.6e-10 2
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 172 7.7e-10 1
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 172 7.8e-10 1
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 167 9.7e-10 1
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 164 1.0e-09 1
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 164 1.0e-09 1
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 171 1.0e-09 1
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 171 1.0e-09 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 168 1.1e-09 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 167 1.5e-09 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 151 3.1e-09 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 164 3.2e-09 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 164 3.2e-09 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 164 3.3e-09 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 164 3.4e-09 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 163 4.1e-09 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 164 4.7e-09 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 162 4.9e-09 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 162 5.4e-09 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 144 5.7e-09 2
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 131 6.4e-09 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 151 6.8e-09 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 164 7.2e-09 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 154 1.3e-08 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 157 1.8e-08 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 158 1.8e-08 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 158 1.8e-08 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 158 1.8e-08 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 158 2.0e-08 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 158 2.0e-08 1
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 159 2.2e-08 1
DICTYBASE|DDB_G0277143 - symbol:gpbA "G protein b" specie... 139 2.3e-08 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 141 2.3e-08 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 158 2.4e-08 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 158 2.4e-08 1
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 154 2.7e-08 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 158 2.7e-08 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 156 3.1e-08 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 154 3.1e-08 1
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 153 3.9e-08 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 152 3.9e-08 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 143 4.1e-08 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 143 4.1e-08 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 155 6.0e-08 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 153 6.7e-08 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 152 6.9e-08 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 152 7.0e-08 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 150 7.0e-08 2
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 123 7.3e-08 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 152 7.6e-08 1
WARNING: Descriptions of 548 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 502 (181.8 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 98/201 (48%), Positives = 129/201 (64%)
Query: 137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
L+S K K +NK+K QTS+IVSSFK + +R F GH+DG+W VA + GQP++G
Sbjct: 117 LSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVSTVVREFGGHKDGIWQVAAKAGQPIIG 176
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256
+ASAD T +W ++ +C+LQY GH+GSVNS++F +DLVL+ SGD + HIWQA +NWE
Sbjct: 177 TASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWE 236
Query: 257 CLVXXXXXXXXXXXXKEP--DESSI-TLRTPVKELLG---HSNVVIAADWLSDGEQVITA 310
E D + TLRTP+ E G H +VV+AADWLS +Q+IT
Sbjct: 237 VPKKGHSSEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITG 296
Query: 311 SWDRVANLFDVETGTILQSLT 331
SWDR A L+DVETG LQ LT
Sbjct: 297 SWDRTAILWDVETGLPLQPLT 317
Score = 105 (42.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFL 231
++ +GH + V+ P Q ++ +AS D T RLW + V + GH+ +V S F
Sbjct: 313 LQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFA 372
Query: 232 PNKDLVLSASGDKSVHIWQ 250
+ D V+S S D+++ +W+
Sbjct: 373 RD-DKVVSGSDDRTIKVWE 390
Score = 86 (35.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ S DRT LW +TG + +GH + V P + LV++AS D + +W
Sbjct: 295 TGSWDRTAILWDVETGLPLQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLW 347
Score = 68 (29.0 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 56 LNSEYDDVV-LPSSVKFK--LNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESII 111
L S +DV +P F+ L+ LF+QIEREF Q+K+D+ +ES+I
Sbjct: 11 LTSLTEDVAAVPEDAPFRARLHVLFAQIEREFEQLYLENQALQEKLDIATTT--KESLI 67
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPI 348
GH+ V ++ + D ++V++ S DR ++++ + ++ A TGG I
Sbjct: 361 GHTETVTSSVFARD-DKVVSGSDDRTIKVWELRNMRSALATIRTDSSVNRLAVSTGGII 418
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 136/326 (41%), Positives = 178/326 (54%)
Query: 25 TMSQKSTKHK-RTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 83
T Q K K + S + +N +Q+ + L + E D LPSSV+ L LF QIERE
Sbjct: 10 TARQAKQKRKSHSLSIRRTNSSEQERTGLPREM-LEGQDSKLPSSVRSTLLELFGQIERE 68
Query: 84 FXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS- 142
F + +ID L E+L E + D ++K K K S
Sbjct: 69 FENLYIENLELRREIDTLNERLAGEG-------QAIDG---AELSKGQLKTKASHSTSQL 118
Query: 143 AQKLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSAS 199
+QKLKTT K TSKIVSSFKT S C ++ + GHRDG+WDV+V QP VLG+AS
Sbjct: 119 SQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTAS 176
Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLV 259
AD T LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+ V+
Sbjct: 177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQLPTPQ 236
Query: 260 XXXXXXXXXXXXKE-----PDESSI---------TLRTPVKELLGHSNVVIAADWLSDGE 305
E DE I T+R P+ L H VVIAADWL G+
Sbjct: 237 PVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSHQGVVIAADWLVGGK 296
Query: 306 QVITASWDRVANLFDVETGTILQSLT 331
QV+TASWDR ANL+DVET ++ SLT
Sbjct: 297 QVVTASWDRTANLYDVETSELVHSLT 322
>ZFIN|ZDB-GENE-030131-8101 [details] [associations]
symbol:wdr37 "WD repeat domain 37" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8101
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00640000091456 CTD:22884 EMBL:AL954666 EMBL:CT583671
IPI:IPI00900634 RefSeq:NP_001161736.1 UniGene:Dr.106574
Ensembl:ENSDART00000111491 Ensembl:ENSDART00000134598 GeneID:558075
KEGG:dre:558075 NextBio:20882300 Uniprot:E7FEE4
Length = 494
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 128/334 (38%), Positives = 182/334 (54%)
Query: 15 IRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLN 74
+ + N + + QK H + S + +N +QD + ++ + E D LP +++ L
Sbjct: 3 VESGNSAAARQVKQKRKSH--SLSIRRTNSTEQDRTGMQRDM-LEGQDSKLPMALRSNLL 59
Query: 75 SLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQ 134
LF QIEREF + +I+ L E+L E + E D+ +K K
Sbjct: 60 DLFGQIEREFENLYIENLELRREIESLNERLSGEG----QTVEGGDL------SKGALKT 109
Query: 135 KVLASNPS-AQKLKTTNKLKVQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRPG 191
K S +QKLKTT K TSKIVSSFK TS C ++ + GHRDG+WD+AV
Sbjct: 110 KASHSTSQLSQKLKTT--YKASTSKIVSSFKATTSRAVCQLVKEYVGHRDGIWDLAVTRV 167
Query: 192 QP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
QP VLG+ASAD LWS +TGKC+L+Y+GH+GSVNS++F P + + L+ASGD++ HIW+
Sbjct: 168 QPLVLGTASADHCSMLWSIETGKCLLKYAGHAGSVNSIKFHPTEQMALTASGDQTAHIWR 227
Query: 251 AVINWECL-----VXXXXXXXXXXXXKE--------PDESSITLRTPVKELLGHSNVVIA 297
++ + K+ P+E T+R L H VVIA
Sbjct: 228 YMVQLPLPQPPADISASLDDDVDFSDKDEADGDADGPNECP-TIRVATTTLKSHQGVVIA 286
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
ADWL G+QV+TASWDR ANL+DVET ++ +LT
Sbjct: 287 ADWLVGGKQVVTASWDRAANLYDVETSELVHTLT 320
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 57/166 (34%), Positives = 85/166 (51%)
Query: 173 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
+ + +GH D V DVA R G +L +AS D+T+ LW +++ K ++ GH+GSV
Sbjct: 133 VMTVAGHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+++ P + S S DK + IW AV E K+ E RTP+
Sbjct: 193 DTIATDPTRTKFCSGSWDKMLKIWSAVATEE--EEEEEEPPSRPRKKQKTEQLGLTRTPL 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH+ V + WL D E++ +ASWD L+D ETG++ SLT
Sbjct: 251 MTLSGHNEAVSSVLWL-DSEEICSASWDHTIRLWDAETGSVKTSLT 295
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 47/161 (29%), Positives = 78/161 (48%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 17 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 74
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLRTPVKELL 289
N+D L+ S S D++V +W V EC P+ S ++ +
Sbjct: 75 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 133
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 174
Score = 127 (49.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
SAD T++LW Q +C+ GH +V+SV +PN D ++SAS DK++ +W+
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 52
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 42/204 (20%), Positives = 85/204 (41%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 15 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 67
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 68 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 125
Query: 238 LSASGDKSVHI-WQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVI 296
A+G + H W + + + D + + +K L H + V
Sbjct: 126 SEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN---KRCMKTLNAHEHFVT 182
Query: 297 AADWLSDGEQVITASWDRVANLFD 320
+ D+ V+T S D+ +++
Sbjct: 183 SLDFHKTAPYVVTGSVDQTVKVWE 206
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 47/161 (29%), Positives = 78/161 (48%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 14 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 71
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLRTPVKELL 289
N+D L+ S S D++V +W V EC P+ S ++ +
Sbjct: 72 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 130
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 171
Score = 116 (45.9 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 42/204 (20%), Positives = 85/204 (41%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 12 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 64
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 65 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 122
Query: 238 LSASGDKSVHI-WQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVI 296
A+G + H W + + + D + + +K L H + V
Sbjct: 123 SEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN---KRCMKTLNAHEHFVT 179
Query: 297 AADWLSDGEQVITASWDRVANLFD 320
+ D+ V+T S D+ +++
Sbjct: 180 SLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
T++LW Q +C+ GH +V+SV +PN D ++SAS DK++ +W+
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 49
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 193 (73.0 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 55/165 (33%), Positives = 84/165 (50%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
I + +GH + V DV V+ +L SAS D+T++LW +T+ K + GH+GSV
Sbjct: 133 IMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+S+ ++ S S DK + IW AV + E K+ E R P+
Sbjct: 193 DSIAVDASRTKFCSGSWDKMLKIWSAVPSEE--EDEYEETSDRPRKKQKTEKMGLTRIPI 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L GHS V + W SD +++ +ASWD ++DVETGT+ +L
Sbjct: 251 VTLSGHSEAVSSVLW-SDVDEICSASWDHNIKIWDVETGTVKSTL 294
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/159 (33%), Positives = 80/159 (50%)
Query: 173 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
+ + +GH D V DVA R G VL +AS D+TV LW +++ K ++ GH+GSV
Sbjct: 133 VMTVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+++ P + S S DK + IW AV E K+ E RTP+
Sbjct: 193 DTIAVDPTRTKFCSGSWDKMLKIWSAVPTEE---EDEIEEPNRPRKKQKTEQMGLTRTPL 249
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
L GH+ V + W+ D +++ +ASWD L+D ETG
Sbjct: 250 MTLSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETG 287
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 190 (71.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 83/287 (28%), Positives = 125/287 (43%)
Query: 58 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 112
SE D+ ++ +K K N +E +F DK M ME + E ++
Sbjct: 28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85
Query: 113 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
EKY +C+ F+ + +S A++ T +TS+I S L
Sbjct: 86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131
Query: 172 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 224
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GS
Sbjct: 132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191
Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTP 284
V+S+ + S S DK + IW V E K+ E RTP
Sbjct: 192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
V L GH V + W SD E++ +ASWD ++DVE+G++ +LT
Sbjct: 250 VVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLT 295
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 82/287 (28%), Positives = 125/287 (43%)
Query: 58 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 112
SE D+ ++ +K K N +E +F DK M ME + E ++
Sbjct: 28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85
Query: 113 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
EKY +C+ F+ + +S A++ T +TS+I S L
Sbjct: 86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131
Query: 172 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 224
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GS
Sbjct: 132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191
Query: 225 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTP 284
V+S+ + S S DK + IW V E K+ E RTP
Sbjct: 192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+ L GH V + W SD E++ +ASWD ++DVE+G++ +LT
Sbjct: 250 IVTLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLT 295
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 186 (70.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 177
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 178 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 233
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 234 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 285
Score = 165 (63.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 139 GDHIVSASRDKTIKMWE 155
Score = 126 (49.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 98 KLLASCSADMTIKLWDFQ-GFECI 120
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 241 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 299
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 300 WDYK-NKRCM 308
Score = 110 (43.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 170
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 171 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 228
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 229 SEATGSET 236
Score = 79 (32.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 179
Query: 345 GGPIRAS 351
G + AS
Sbjct: 180 DGTLIAS 186
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 269 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 311
Score = 42 (19.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 308 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 164 (62.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 186 (70.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 56/166 (33%), Positives = 80/166 (48%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLWSTQTGKCVLQY----SGHSGSV 225
I + +GH + V DVA V+ +L SAS D+T+ LW K ++ GH+GSV
Sbjct: 121 IMTIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNKVKALHCCRGHAGSV 180
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+SV + S S DK + IW AV E K+ E RTP+
Sbjct: 181 DSVAVDCTRTKFCSGSWDKMLKIWSAVPTDE--EDEMEEAANRPRKKQKTEQLGLTRTPL 238
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH+ + + W SD E++ +ASWD L+D ETG + +LT
Sbjct: 239 ATLSGHTEAISSVLW-SDAEEICSASWDHTIKLWDAETGGLKSTLT 283
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 185 (70.2 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 52/176 (29%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYST---ISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++D+ TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 163 (62.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 122 (48.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDFK-NKRCM 373
Score = 110 (43.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 237
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSET 301
Score = 79 (32.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/176 (29%), Positives = 78/176 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SA+ D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ESS + + E G
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYS---SISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV TG L +L +R +GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350
Score = 162 (62.1 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQ 250
D ++SA+ DK++ +W+
Sbjct: 204 GDHIVSAARDKTIKMWE 220
Score = 126 (49.4 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 123 (48.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 76 (31.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 15/67 (22%), Positives = 37/67 (55%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++A+ D+ +++V+TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 46 (21.3 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L+GH N V + S G+ +++ + D+ ++D + +++L
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Score = 42 (19.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 70/241 (29%), Positives = 111/241 (46%)
Query: 101 LMEKLDRESIINEKYPECNDMECVTNMNKN---FNKQKVLASNPSAQKLKTTNKLKVQTS 157
L + ++ E+I +E+ E +E T F+ + A + + + T + K TS
Sbjct: 66 LFKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISAIEGAEEWILTGSYDK--TS 123
Query: 158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTG 212
+I SS S+++ GH D V DVA V+ +L SAS D+T+ LW + +
Sbjct: 124 RIWSSEGKSIMTIV------GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN 177
Query: 213 KCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXX 270
K + GH+GSV+S+ S S DK + IW V E
Sbjct: 178 KVKALHCCRGHAGSVDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPR 235
Query: 271 XKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
K+ E RTP+ L GH + + W SD E++ +ASWD ++DVE+G++ +L
Sbjct: 236 KKQKTEQLGLTRTPIVTLSGHKEAISSVLW-SDAEEICSASWDHTIGVWDVESGSLKSTL 294
Query: 331 T 331
T
Sbjct: 295 T 295
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 180 (68.4 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 54/166 (32%), Positives = 79/166 (47%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+S+ S S DK + IW V E K+ E RTP+
Sbjct: 193 DSIAVDSTGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQLGLTRTPI 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH + + W SD E++ +ASWD ++DVE+G++ +LT
Sbjct: 251 VTLSGHKEAISSVLW-SDAEEICSASWDHTIKVWDVESGSLKSTLT 295
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 179 (68.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 54/166 (32%), Positives = 80/166 (48%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
I + GH D V DVA V+ +L S+S D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+S+ S S DK + IW AV E K+ E RTP+
Sbjct: 193 DSIAVDSTGTKFCSGSWDKMLKIWSAVPTDE--EDELEEPTNRPRKKQKTEQLGLTRTPI 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH + + W SD E++ +ASWD ++DVE+G++ +LT
Sbjct: 251 VTLSGHKEAISSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLT 295
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 159 (61.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH++G+ D+A ++ SAS D+T+++W ++GK V GH V V F P
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 234 KDLVLSASGDKSVHIWQAVINWEC 257
+L++S S D++V IW V EC
Sbjct: 142 SNLIVSGSFDENVRIWD-VNTGEC 164
Score = 150 (57.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH + V P L SASAD+T+++W GK GH ++ + + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 235 DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DES----SIT 280
L+ SAS DK++ IW P DE+ +
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TEPGEAI 337
K + HS+ V + DG V++ S+D ++D TG +L ++ TE G+ +
Sbjct: 161 TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV 218
Score = 143 (55.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH++ V+ V+ P ++ S S D VR+W TG+C S HS V V F
Sbjct: 123 VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR 182
Query: 233 NKDLVLSASGDKSVHIW 249
+ LV+S S D +V IW
Sbjct: 183 DGTLVVSGSYDGTVRIW 199
Score = 118 (46.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-VNSV 228
C K+ S H D V V ++ S S D TVR+W T TG+ + S G V+ V
Sbjct: 164 CTKM--ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFV 221
Query: 229 RFLPNKDLVLSASGDKSVHIWQAVINWECL 258
+F PN VL+ + D ++ +W N +CL
Sbjct: 222 KFSPNGKFVLAGTLDNTLRLWSYNNNKKCL 251
Score = 56 (24.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 285 VKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
+K GH N + + ++ G+ ++T S D + +++++T I+Q+L + + A
Sbjct: 251 LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA 310
Query: 342 GRTGGPIRASPLLLAIRS 359
I AS L RS
Sbjct: 311 CHPTENIIASGALEKDRS 328
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 165 (63.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH + V D+ +L S SAD T++LW QT CV GH +V+ VRF P+
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
D ++S+S DK++ +W+A + C+
Sbjct: 202 GDQLISSSRDKTIKVWEAATGY-CI 225
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 254
L + S D+T+++W TG+C+ Y GH V +VRF P +LS DK++ +W +
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWD-IAQ 377
Query: 255 WECL 258
C+
Sbjct: 378 GRCI 381
Score = 122 (48.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH V V P L S+S D+T+++W TG C+ GH V +
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ + S S D+++ W ++ ECL
Sbjct: 243 DGSCIASCSNDQTIKTWN-IVKGECL 267
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 41/195 (21%), Positives = 79/195 (40%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
+GHR+ + V P ++ SAS D T+++W ++G+ GH+ +V + F +L
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 237 VLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSI-------TLRT----- 283
+ S S D ++ +W ++C+ + P + T++
Sbjct: 163 LASCSADLTIKLWDFQ-TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 284 --PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
+K L+GH + V DG + + S D+ +++ G L + E + A
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA 281
Query: 342 GRTGGPIRASPLLLA 356
T I LL+
Sbjct: 282 FSTANIIDIPGSLLS 296
Score = 51 (23.0 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
+GH N V A + G+ +++ D+ ++D+ G ++++ E
Sbjct: 343 IGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINE 386
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 176 (67.0 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+F GHRD + + P + S S D +V +W+ + +++GH +V V+F P+
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXX---------XKEPDESSITLRTP 284
L+ S+S DK+V +W + E ++ D+ SI L +
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 285 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
++ L H+N V A + DG+ +++ S DR L+D + ++ + EPG
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Score = 162 (62.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 59/189 (31%), Positives = 84/189 (44%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S+S D+TVRLW G+ VL + H+GSV SV F +
Sbjct: 56 FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVL-FRAHTGSVRSVCFSADG 114
Query: 235 DLVLSASGDKSVHIW----QAVI-------NW-ECLVXX-----XXXXXXXXXXKEPDES 277
+L+AS D+S+ +W Q +I NW C K D S
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 278 SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
S L E G+S+ V D+ + TAS D ++D+ T T+LQ A+
Sbjct: 175 SRQLIHTFCEPGGYSSYV---DFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAV 231
Query: 338 RAAAGRTGG 346
A + G
Sbjct: 232 NALSFHPSG 240
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 48/186 (25%), Positives = 76/186 (40%)
Query: 176 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
F H V V GQ +L +AS D++++LWS K + H+ V RF P+
Sbjct: 98 FRAHTGSVRSVCFSADGQSLL-TASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 235 DLVLSASGDKSVHIWQA----VINWECLVXXXXX------XXXXXXXKEPDES----SIT 280
L++S S D++V +W A +I+ C D + I
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIR 216
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRA 339
T ++ HS V A + G ++TAS D + D+ G +L +L G A
Sbjct: 217 THTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCV 276
Query: 340 AAGRTG 345
+ R+G
Sbjct: 277 SFSRSG 282
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 163 (62.4 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 114
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 115 SNLIVSGSFDESVRIWD-VKTGKCL 138
Score = 129 (50.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 156 DGSLIVSSSYDGLCRIWDTA-SGQCL 180
Score = 114 (45.2 bits), Expect = 0.00051, P = 0.00051
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 16 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 75
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 135
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 136 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 163
Score = 46 (21.3 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 227
Score = 37 (18.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 268 VQKLQGHTDVVIS 280
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 51/176 (28%), Positives = 76/176 (43%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W TG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S S D++V +W V EC ES+ + E G
Sbjct: 243 NQDGTLLASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESA---HPTISEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
N G +++ S D+ ++D+ TG L +L +R GG
Sbjct: 299 SENKKSG----KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG 350
Score = 164 (62.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
D ++SAS DK++ +W+ + C+
Sbjct: 204 GDHIVSASRDKTMKMWEVATGY-CV 227
Score = 128 (50.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W TG C++ GH V V F P V+S + DK++ I
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 249 WQAVINWECL 258
W N C+
Sbjct: 365 WDYK-NKRCM 373
Score = 118 (46.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P ++ SAS D T+++W + G GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 112 (44.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K T K+ + + Y +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK--TMKM-----WEVATGYCVKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK--DLV 237
W VRP Q +L S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 238 LSASGDKS 245
A+G ++
Sbjct: 294 SEATGSEN 301
Score = 44 (20.5 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L+GH N V + G V++ + D+ ++D + +++L+
Sbjct: 334 LVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLS 377
Score = 42 (19.8 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 141 SNLIVSGSFDESVRIWD-VKTGKCL 164
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQCL 206
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 219 SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECLVXXXX--------XXXXXX 269
+GH+ +V+SV+F PN + + S+S DK + IW A +E +
Sbjct: 42 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL 101
Query: 270 XXKEPDESSITLRTP-----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
D+ ++ + +K L GHSN V ++ +++ S+D ++DV+TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 325 TILQSLTEPGEAIRAAA-GRTGGPIRAS 351
L++L + + A R G I +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 285 VKELLGHSNVVIA 297
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 155 (59.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
++ F+GH +G+ DVA + SAS D+T++LW +TG + GH+ V F P
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
++++S S D++V IW V +CL
Sbjct: 124 QSNMIVSGSFDETVRIWD-VTTGKCL 148
Score = 124 (48.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I++ GH + + V P ++ S S D TVR+W TGKC+ HS V +V F
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 233 NKDLVLSASGDKSVHIWQA 251
+ L++S+S D IW +
Sbjct: 166 DGSLIVSSSYDGLCRIWDS 184
Score = 104 (41.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSV 228
++ + H V V +L SASAD+T+R ++ T + V +++GH ++ V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 229 RFLPNKDLVLSASGDKSVHIW 249
F + ++SAS DK++ +W
Sbjct: 78 AFSSDARFIVSASDDKTLKLW 98
Score = 82 (33.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA-GR 343
+K L+GH+N ++ +++ S+D ++DV TG L+ L + + A R
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 344 TGGPIRAS 351
G I +S
Sbjct: 166 DGSLIVSS 173
Score = 54 (24.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 285 VKELLGHSNV---VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
+K GH N + +A +++G+++++ S D +++++ + +LQ L E + A
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 163 (62.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLP 232
RS GH D V DVA +L S SAD +++LW Q +C+ GH +V+SV F+P
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
D VLSAS D+++ +W+ + C+
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGY-CV 228
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 45/174 (25%), Positives = 72/174 (41%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I++ GH V VA P + SAS DRT+++W TG CV Y+GH V VR
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHS 292
+ + S D+++ +W + +C V E++ + + E G
Sbjct: 246 EGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASA---INEAAGAD 301
Query: 293 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
N G + + S D+ ++DV G L +L+ +R A GG
Sbjct: 302 N----KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGG 351
Score = 139 (54.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S +GHR + V P ++ SAS D T+R+W +TG+ GH+ SV V F
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D S+ +W ++EC+
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECI 186
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 193 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
P L S S D+T+R+W G C+L SGH V + F P ++SAS DK++ +W +
Sbjct: 310 PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD-L 368
Query: 253 INWECL 258
N C+
Sbjct: 369 RNKRCM 374
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 217
K + + S+ C + + SGH + V +A PG L SAS D+T+R+W + +C+
Sbjct: 319 KTIRIWDVSVGLC--LLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKT 376
Query: 218 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
H S+ F V+S S D++V +W+
Sbjct: 377 LYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 77 (32.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
+K + GH + V + ++ G+ V++AS DR +++V TG +++ T E +R
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 345 GGPIRAS 351
G I A+
Sbjct: 246 EGSIFAT 252
Score = 48 (22.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L GH N V + G+ +++AS D+ ++D+ +++L
Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTL 377
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
R F+GH G+ + P + ++S D TV LW+ Q +C+ +++ HS VN V + P
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCI-RFASHSAPVNGVAWSP 70
Query: 233 NKDLVLSASGDKSVHIWQAV---INWECLVXXXX-------XXXXXXXXKEPDESS---- 278
+LV SA D++V IW+ ++ E + D+S+
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
+ R V +N V +A + +G+ V TAS D+ ++DV++G +++ TE A R
Sbjct: 131 VARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPR 190
Query: 339 AAAGRTGGPIRASPL 353
A G + A L
Sbjct: 191 QLAWHPWGNMLAVAL 205
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 37/130 (28%), Positives = 56/130 (43%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
ECV + + LA +P L L KI + LL Y + H
Sbjct: 177 ECVRTFTEERAAPRQLAWHPWGNMLAVA--LGCNRIKIFDVSGSQLLQLYVV-----HSA 229
Query: 182 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS 241
V DVA P L S S DRT+R+ G+ + +GH+ +VN+V F + D +
Sbjct: 230 PVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGG 289
Query: 242 GDKSVHIWQA 251
D+ + +WQ+
Sbjct: 290 SDRQLLVWQS 299
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 149 (57.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
C K+ GH + V+ V P ++ S S D T+R+W +TGKCV HS ++SV
Sbjct: 120 CLKV--LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVH 177
Query: 230 FLPNKDLVLSASGDKSVHIWQA 251
F + L++SAS D S IW A
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDA 199
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V +L SAS D+T+ LWS + +Y GHS ++ + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPDESSI-------TLRT- 283
+ SAS D ++ IW A +ECL V P + I T+R
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 284 ------PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
V+ + HS + + + DG +++AS D ++D + GT L++L +
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID 210
Score = 61 (26.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 285 VKELLGHSNVVI---AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
+K GH+N V +A +++G+ +++ S D L+D++ ILQ L +A+
Sbjct: 248 LKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 183 (69.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 60/213 (28%), Positives = 97/213 (45%)
Query: 140 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS 199
+P +Q L + ++ T+++ S S L CYK GH VWDV+ P +AS
Sbjct: 688 SPDSQYLLSCSE--DTTARLWSMETMSNLVCYK-----GHNFPVWDVSFSPFGFYFATAS 740
Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL- 258
DRT RLW+T + ++GH N+VRF PN + + + S DKS +W+ + +C+
Sbjct: 741 HDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE-IQTGKCVR 799
Query: 259 VXXXXXXXXXXXXKEPD---------ESSITL-----RTPVKELLGHSNVVIAADWLSDG 304
+ PD ++S+ L VK++ GH+ V + D+ DG
Sbjct: 800 IFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDG 859
Query: 305 EQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
+ + S D L+DV+ T+P I
Sbjct: 860 SILASGSSDCTVRLWDVKKAFNSSLSTQPSSLI 892
Score = 136 (52.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 60/240 (25%), Positives = 95/240 (39%)
Query: 126 NMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWD 185
N N+N NK +N ++ ++NKL+ Q + S FKT F GH V+
Sbjct: 638 NNNEN-NKSTTANNNLNSGSSSSSNKLQKQQKE--SEFKT----------FLGHSGPVYG 684
Query: 186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245
+ P L S S D T RLWS +T ++ Y GH+ V V F P +AS D++
Sbjct: 685 CSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRT 744
Query: 246 VHIWQA-------VINW---ECLVXXXXXXXXXXXXKEPDESS----ITLRTPVKELLGH 291
+W + +C D+S+ I V+ +GH
Sbjct: 745 ARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGH 804
Query: 292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351
+ + DG + TA D L+D+ TG ++ + + + + G I AS
Sbjct: 805 RAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILAS 864
Score = 37 (18.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 21 PQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLN 57
P D + +T ++ + NLG D L +L+
Sbjct: 228 PSDDEATNTTTTNQTNINTVTDNLGSSDDQELAQYLH 264
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 54/185 (29%), Positives = 82/185 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++F GH +W VA P L SAS D T+++W TG+ HS SV SV F P
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP 886
Query: 233 NKDLVLSASGDKSVHIWQAVIN-----------WECLVXXXXXXXXXXXXKEPDESSITL 281
+ L+ S+S D ++ +W W V E ++++ L
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSE--KNTVKL 944
Query: 282 RTPVK-ELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
P ELL GHS V + + DG+Q+ ++S D L++ TG + Q+
Sbjct: 945 WNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLW 1004
Query: 337 IRAAA 341
IRA A
Sbjct: 1005 IRAVA 1009
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 53/192 (27%), Positives = 82/192 (42%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH GV V P +L S S D T++LW+ TG+ +G S V+SV F P+
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD 1139
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITLRTP 284
+ S D ++ +W + PD + + L P
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 285 VK-ELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
ELL GHS V + + DG+ + ++S+ L+D TG +LQ+L +P E+ +
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGS 1259
Query: 340 AAGRTGGPIRAS 351
A G AS
Sbjct: 1260 VAFSPDGNRLAS 1271
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 50/193 (25%), Positives = 83/193 (43%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH V +A P +L S S D T+ LW + TG+ + + GH S+ SV F P
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP 844
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITLRT 283
+ + SAS D ++ IW PD +S+I +
Sbjct: 845 DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Query: 284 PV-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
P + L G S V + + DG+++ + S L++ TG +LQ+L +++R
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVR 964
Query: 339 AAAGRTGGPIRAS 351
+ A G AS
Sbjct: 965 SVAFSPDGKQLAS 977
Score = 156 (60.0 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 58/231 (25%), Positives = 103/231 (44%)
Query: 135 KVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV 194
K +A +P +KL + ++ T K+ + LL ++ GH V VA P
Sbjct: 922 KSVAFSPDGKKLASGSEKN--TVKLWNPATGELL-----QTLEGHSQSVRSVAFSPDGKQ 974
Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 254
L S+S+D T++LW++ TG+ + GH + +V F P+ ++S S D ++ +W +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 255 WECLVXXXXXXXXXXXXKEPDE---SSITLRTPVK-------ELL----GHSNVVIAADW 300
PD+ +S +L + +K EL GHS V + +
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF 1094
Query: 301 LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351
DG+ + + S+D L++ TG + Q+LT + + + A G AS
Sbjct: 1095 SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLAS 1145
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 51/192 (26%), Positives = 84/192 (43%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ H V V P L S S D TV++W TG+ + GHSG+V S+ F P+
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 234 KDLVLSASGDKSVHIWQAVIN-----WECLVXXXXXXXXXXXXKE----PDESSIT---L 281
L+ S S D ++ +W + +E KE D+S+I L
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Query: 282 RT-PVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
T +++ L HS V + + DG+ + ++S D +++ TG + QSL +++
Sbjct: 864 ATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKS 923
Query: 340 AAGRTGGPIRAS 351
A G AS
Sbjct: 924 VAFSPDGKKLAS 935
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH D + V P +L S S D+T +LW TG+ + + GHS V SV F P
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP 1222
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ L+ S+S +++ +W V
Sbjct: 1223 DGKLLASSSYGETIKLWDPV 1242
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 53/166 (31%), Positives = 79/166 (47%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLWSTQTGKCVLQY----SGHSGSV 225
I + GH D V DVA V+ +L +AS D+TV LW K ++ GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+++ + S S DK + IW V E K+ E RTP+
Sbjct: 193 DAIAVDSSGAKFCSGSWDKMLKIWSTVPTDE--EDEMEEATNRPRKKQKTEQLGLTRTPL 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH+ + + W SD E++ +ASWD ++DVE+G + +LT
Sbjct: 251 VTLSGHTEAISSVLW-SDAEEICSASWDHTIRVWDVESGGLKSTLT 295
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 176 (67.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 58/203 (28%), Positives = 85/203 (41%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
++++ GH + VW VL S S D TVRLW TG GHSG V SV F
Sbjct: 695 ELQTLEGHSNSVW--------AVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS 746
Query: 232 PNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITLR 282
P+ L+ S S DK+V +W PD + ++ L
Sbjct: 747 PDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW 806
Query: 283 TPV-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
P + L GHS+ V + + DG + + S+D+ L+D TGT+ Q+L G
Sbjct: 807 DPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVT 866
Query: 338 RAAAGRTGGPIRASPLLLAIRSK 360
+ G I + L I+S+
Sbjct: 867 ELQFSQDGSYISTNLGSLNIQSR 889
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTS----LLSCYKIRSFSGHRDGVWDVAVRPGQPV 194
S P+ KLKT IV + T + K +S +GH + DV++
Sbjct: 28 STPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAINDVSISSDGLF 86
Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
S S D +VRLW G+ + + GH+ V SV F P+ ++SAS DK++ +W +
Sbjct: 87 ALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL 144
Score = 68 (29.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
K L GH+ V+ DG + D VA L+DV+ G L SL E G I +
Sbjct: 195 KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINS 247
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTS----LLSCYKIRSFSGHRDGVWDVAVRPGQPV 194
S P+ KLKT IV + T + K +S +GH + DV++
Sbjct: 28 STPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAINDVSISSDGLF 86
Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
S S D +VRLW G+ + + GH+ V SV F P+ ++SAS DK++ +W +
Sbjct: 87 ALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL 144
Score = 68 (29.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
K L GH+ V+ DG + D VA L+DV+ G L SL E G I +
Sbjct: 195 KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINS 247
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
LA +P+ KL T + +T+K+ +L C + FSGHR G+W+V P VL
Sbjct: 485 LAVSPN-DKLLATGS-QDRTAKL-----WALPQCQLLGVFSGHRRGLWNVQFSPTDQVLA 537
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256
+ASAD T++LW+ Q C+ + GH SV V F+ +LS+ D + +W N E
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN-E 596
Query: 257 CL 258
C+
Sbjct: 597 CV 598
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
H + +AV P +L + S DRT +LW+ + + +SGH + +V+F P ++
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLA 537
Query: 239 SASGDKSVHIWQAVINWECL 258
+AS D ++ +W A+ ++ CL
Sbjct: 538 TASADGTIKLW-ALQDFSCL 556
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 148 (57.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V ++ P L SA D+ ++LW +G + GH+ S+ S+ F P
Sbjct: 15 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP 74
Query: 233 NKDLVLSASGDKSVHIW 249
+ L+ SAS D SV +W
Sbjct: 75 DSGLIASASMDNSVRVW 91
Score = 115 (45.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 201 DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
D+TVRLWS Q G V ++GH G V S+ F PN + SA D+ + +W
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 49
Score = 53 (23.7 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 283 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323
T KEL GH++ + + + D + +AS D ++D+ +
Sbjct: 55 TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 95
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 172 (65.6 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 396 ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 455
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V F+ +LS+ D V +W + N EC+
Sbjct: 456 LKVAFVSRGTQLLSSGSDGLVKLW-TIKNNECV 487
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 167 (63.8 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 50/176 (28%), Positives = 75/176 (42%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR+ GH V VA+ P + SAS D+T+++W TG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR--P 242
Query: 233 NKD--LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLG 290
N+D L+ S+S D++V +W V EC ES+ + E G
Sbjct: 243 NQDGTLIASSSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESA---HPTILEATG 298
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
G +++ S D+ ++DV G L +L +R GG
Sbjct: 299 SETKKSG----KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG 350
Score = 165 (63.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
D ++SAS DK++ +W+ + C+
Sbjct: 204 GDHIVSASRDKTIKMWEVATGY-CV 227
Score = 125 (49.1 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
L+ S S D ++ +W +EC+
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFECI 185
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 158 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 217
K + + S+ C + + GH + V V V PG + S + D+T+R+W + +C
Sbjct: 318 KTIKMWDVSIGMC--LMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKT 375
Query: 218 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
S H V S+ F V++ S D++V +W+
Sbjct: 376 LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 122 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 181
EC+ M+ + + +A P+ + + ++ K + ++ + C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVATGYC--VKTFTGHRE 235
Query: 182 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK--DLV 237
W VRP Q ++ S+S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 238 LSASGDKS 245
L A+G ++
Sbjct: 294 LEATGSET 301
Score = 114 (45.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG P L S S D+T+++W G C++ GH V V P ++S + DK++ I
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 249 W 249
W
Sbjct: 365 W 365
Score = 76 (31.8 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 16/67 (23%), Positives = 36/67 (53%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
++ + GH + V + + +G+ +++AS D+ +++V TG +++ T E +R
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 GGPIRAS 351
G + AS
Sbjct: 245 DGTLIAS 251
Score = 42 (19.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
K L H + V + D+ V+T S D+ +++
Sbjct: 374 KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L+GH N V G+ +++ + D+ ++D + ++L+
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLS 377
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 172 (65.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 42/122 (34%), Positives = 65/122 (53%)
Query: 137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
LA +P+ KL T + +T+K+ +L C + F+GHR G+W+V P VL
Sbjct: 485 LAVSPN-DKLLATGS-QDRTAKL-----WALPQCQLLGVFTGHRRGLWNVQFSPTDQVLA 537
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256
+ASAD T++LW+ Q C+ + GH SV V F+ +LS+ D + +W N E
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSN-E 596
Query: 257 CL 258
C+
Sbjct: 597 CV 598
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 172 (65.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V F+ +LS+ D V +W + N EC+
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLVKLW-TIKNNECV 598
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 167 (63.8 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 52/166 (31%), Positives = 80/166 (48%)
Query: 173 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 225
I + GH D V DVA V+ +L +AS D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSV 192
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPV 285
+++ + S S DK + IW V E K+ E RTP+
Sbjct: 193 DAIAVDSSGTKFCSGSWDKMLKIWSTVPTDE--EDEIQEPTNRPRKKQKTEQLGLTRTPL 250
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L GH+ + + W SD ++V +ASWD ++DVE+G + +LT
Sbjct: 251 VTLSGHTEAISSVLW-SDADEVCSASWDHTVRVWDVESGGLKSTLT 295
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/185 (29%), Positives = 79/185 (42%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
+SF GH V DV + SAS DRT+RLW +TG+ ++ GH G V SV N
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EP-DESSITLRTP----VK- 286
++SAS DK+V +W + EC+ + P D+SS + VK
Sbjct: 120 LRQIVSASRDKTVKVWNTI--GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 287 ----------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
+ +GH+ + DG +A D V L+D+ L +L E
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE- 236
Query: 337 IRAAA 341
+ A A
Sbjct: 237 VHALA 241
Score = 96 (38.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
P K GHS++V +DG ++ASWDR L+D+ETG Q
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQ 102
Score = 61 (26.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 220 GHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ 250
GH+G V S+ P + DL+LS S DK++ W+
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWK 46
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 164 (62.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/185 (29%), Positives = 79/185 (42%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
+SF GH V DV + SAS DRT+RLW +TG+ ++ GH G V SV N
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EP-DESSITLRTP----VK- 286
++SAS DK+V +W + EC+ + P D+SS + VK
Sbjct: 120 LRQIVSASRDKTVKVWNTI--GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 287 ----------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
+ +GH+ + DG +A D V L+D+ L +L E
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE- 236
Query: 337 IRAAA 341
+ A A
Sbjct: 237 VHALA 241
Score = 96 (38.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
P K GHS++V +DG ++ASWDR L+D+ETG Q
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQ 102
Score = 61 (26.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 220 GHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ 250
GH+G V S+ P + DL+LS S DK++ W+
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWK 46
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
+L C + +FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V F+ +LS+ D + +W + N EC+
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLLKLW-TIKNNECV 598
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
H + VAV P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLA 537
Query: 239 SASGDKSVHIWQAVINWECL 258
+AS D ++ +W A+ ++ CL
Sbjct: 538 TASADGTIKLW-ALQDFSCL 556
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
+L C + +FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 226 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V F+ +LS+ D + +W + N EC+
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLLKLW-TIKNNECV 598
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 238
H + VAV P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLA 537
Query: 239 SASGDKSVHIWQAVINWECL 258
+AS D ++ +W A+ ++ CL
Sbjct: 538 TASADGTIKLW-ALQDFSCL 556
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/158 (27%), Positives = 67/158 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV D+ P + G+ D R+W +TG+CV+ GH + S+ F PN V
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K +P++ L
Sbjct: 408 ATGSGDNACKVWD-LRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG 466
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
+P+K L GH V+ D DG+ + T S+DR L+
Sbjct: 467 WSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN V
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + +C+ K EP+ + L
Sbjct: 422 ATGSGDNTCKVWD-LRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPG 480
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D DG+ + T S+DR L+ E
Sbjct: 481 WSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 151 (58.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 157 SKIVSSFKTSLLSCYKIRSFS------GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ 210
S ++S + S + + ++SF+ GH VWDV V P +AS DRT RLWS
Sbjct: 367 SGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFA 426
Query: 211 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ Y+GH V+ V+F PN + + + S DK+V +W
Sbjct: 427 RTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW 465
Score = 149 (57.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
S Y +R ++GH V V P + + S D+TVRLWST+ G V ++GH G V
Sbjct: 424 SFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPV 483
Query: 226 NSVRFLPNKDLVLSASGDKSVHIW 249
++ F PN + SA D+ + +W
Sbjct: 484 LTLAFSPNGKYLASAGEDQRLKLW 507
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G GH+ +++S+ F
Sbjct: 473 VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQ 532
Query: 233 NKDLVLSASGDKSVHIW 249
+ LV SAS D +V +W
Sbjct: 533 DSSLVASASMDNTVRVW 549
Score = 57 (25.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
K+L GH++ + + + D V +AS D ++D+
Sbjct: 516 KDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP + L
Sbjct: 422 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 480
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 481 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP + L
Sbjct: 423 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 481
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 482 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 378 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP + L
Sbjct: 438 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 496
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 497 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 380 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP + L
Sbjct: 440 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 498
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 499 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 163 (62.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP L
Sbjct: 422 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG 480
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 481 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 58/214 (27%), Positives = 95/214 (44%)
Query: 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV 215
T ++ S+ + L CYK GH VWD P S S DRT R+WS + +
Sbjct: 441 TIRLWSTKLNANLVCYK-----GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPL 495
Query: 216 LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEP 274
+GH V+ V++ PN + + + S DK+V +W V EC+ + P
Sbjct: 496 RIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWD-VQTGECVRIFIGHRSMVLSLAMSP 554
Query: 275 D---------ESSIT---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
D + +I L T + L+GH++ V + + +G + + S D L+D
Sbjct: 555 DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 614
Query: 321 VETGTILQSLTEP-GEAIRAAAGRTGGPIRASPL 353
V + T L E G + R + RT P +++P+
Sbjct: 615 VTSSTKLTKAEEKNGNSNRLRSLRTF-PTKSTPV 647
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 162 (62.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 60/215 (27%), Positives = 85/215 (39%)
Query: 140 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSA 198
N S + TT L SK K + +K+ R SGH V V V PG S
Sbjct: 145 NSSKGEDNTTRSLL--PSKAPMMMKPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASG 202
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
ADR +++W +G+ L +GH SV +V+ P + S DK V W N
Sbjct: 203 GADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIR 262
Query: 259 VXXXXXXXXXXXXKEPD-ESSIT-----------LRTPVKE--LLGHSNVVIAADWLSDG 304
P + +T +RT + GH+N V S
Sbjct: 263 HYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVD 322
Query: 305 EQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
QVITAS D L+D+ G + +LT +++RA
Sbjct: 323 PQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 113 EKYPECNDME---CVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS 169
+K +C D+E + + + + + + L+ +PS L T + T++ V +T
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTC--ARDSTAR-VWDMRTKA-- 301
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
++ F+GH + V DV + P + +AS D TVRLW G+ + + H SV ++
Sbjct: 302 --QVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALT 359
Query: 230 FLPNKDLVLSASGDKSVHIWQ 250
P ++ SAS D ++ W+
Sbjct: 360 IHPRLNMFASASPD-NIKQWK 379
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSITLR-------------- 282
+ SGD + +W + C+ K EP L
Sbjct: 422 ATGSGDNTCKVWD-LRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG 480
Query: 283 -TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 481 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 144 (55.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R +GH V D A+ SAS D+T+RLW + G+C Q+ GH+ V SV P+
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPD 116
Query: 234 KDLVLSASGDKSVHIWQAVIN 254
V+S S DK++ IW + N
Sbjct: 117 NRQVVSGSRDKTIKIWNIIGN 137
Score = 52 (23.4 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 290 GHSNVVIAADWLSDGEQV--ITASWDRVANLFDVETGTILQS 329
GHS+ V + + + + ++A WD+ ++D+ET ++ S
Sbjct: 146 GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Score = 46 (21.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 275 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D + +LRT GH+ V A DG + D L+D+ T L SL
Sbjct: 178 DLETFSLRT---SHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL 230
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 131 (51.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 173 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
I + SGH G+ D+ P +L S S D T+RLW+ +C+ H+ + +++F
Sbjct: 61 ITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFT 120
Query: 232 PNKDLVLSASGDKSVHIWQAVIN 254
++++S S D+++ IW N
Sbjct: 121 QKGNILISGSSDETITIWDITSN 143
Score = 70 (29.7 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
L HS+ V + D +++AS+D + LFD++T L++LT
Sbjct: 151 LAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLT 194
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 151 (58.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ SGH+ G+ DVA +L S S D+T+++W TGK + GHS V F P
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
+L++S S D+SV IW V +CL
Sbjct: 168 SNLIVSGSFDESVRIWD-VRTGKCL 191
Score = 129 (50.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 208
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L++S+S D IW + +CL
Sbjct: 209 DGSLIVSSSYDGLCRIWDTA-SGQCL 233
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
+PG ++SA L +GH+ +V++V+F PN + + S+S DK + I
Sbjct: 39 QPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKI 98
Query: 249 WQA-------VINWECLVXXXXXXXXXXXXKEPDESSITLRT-------PVKELLGHSNV 294
W A I+ L TL+ +K L GHSN
Sbjct: 99 WGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY 158
Query: 295 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA-GRTGGPIRAS 351
V ++ +++ S+D ++DV TG L++L + + A R G I +S
Sbjct: 159 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 216
Score = 46 (21.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T
Sbjct: 233 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 164 (62.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GHR GVW V P +LGSASAD +VR+WS Q C+ + GH SV + F+ +
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQL 583
Query: 238 LSASGDKSVHIWQAVINWECL 258
+S+ D V +W N EC+
Sbjct: 584 VSSGSDGLVKLWTIKTN-ECV 603
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 172 KIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
K RS H V V V P +L S S DRT +LW+ + + GH V SV+F
Sbjct: 475 KARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQF 534
Query: 231 LPNKDLVLSASGDKSVHIWQAVINWECL 258
P ++ SAS D SV IW ++ ++ CL
Sbjct: 535 SPVDQILGSASADGSVRIW-SIQDFSCL 561
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/173 (26%), Positives = 77/173 (44%)
Query: 168 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 227
L+ ++R + H V A P L +AS D V +W T++G+ + + +GH G V S
Sbjct: 14 LAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKS 73
Query: 228 VRFLPNKDLVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPDESSITL----- 281
F P+ L+ S+S D S+ +W V +CL V PD +
Sbjct: 74 CCFSPDGRLIASSSSDHSIRLWD-VARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Query: 282 RTPVKE---------LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325
R V E L+GH + + ++D+ + + T SWD +++D+ T
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 41/169 (24%), Positives = 70/169 (41%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH+ V V+ P L S D+ +W Q+G+ V GH S+ S F P D +
Sbjct: 108 GHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL 167
Query: 238 LSASGDKSVHIWQA-----VINWECL------VXXXXXXXXXXXXKEPDESSITLRTPVK 286
+ S D +VHIW V+++ L + + +I + P
Sbjct: 168 ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTT 227
Query: 287 -----ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+L GH+ V + + D ++ +A + R ++D TG L++L
Sbjct: 228 NNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETL 276
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/148 (30%), Positives = 68/148 (45%)
Query: 187 AVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245
AV P + L S S D T+ LW KCV + +GH VN V++ P+ L+ SAS DKS
Sbjct: 339 AVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKS 398
Query: 246 VHIWQA-----VINWECLVXXXXXXXXXXXXK-----EPDES----SITLRTPVKELLGH 291
V +W+A + + V + D + S+ + +EL GH
Sbjct: 399 VRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGH 458
Query: 292 SNVVIAADWLSDGEQVITASWDRVANLF 319
++ V DW DG +V + D+V L+
Sbjct: 459 ADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+ +GH++ V DV P ++ SAS D++VRLW G+ + + GH +V +V +
Sbjct: 368 VERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSA 427
Query: 233 NKDLVLSASGDKSVHIW 249
+ L++S S D ++ +W
Sbjct: 428 DSRLIVSGSKDSTLKVW 444
Score = 122 (48.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 172 KIRSFSGHRDGV----WDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
K R SGH+ + W+ R P L SAS D R+W + G+C++ +GH+ +V
Sbjct: 196 KGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVT 255
Query: 227 SVRFLPNKDLVLSASGDKSVHIWQA 251
+VR+ L+ ++S D++V +W+A
Sbjct: 256 AVRW-GGAGLIYTSSKDRTVKMWRA 279
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+F GH V+ VA ++ S S D T+++WS QT K + GH+ V V + P+
Sbjct: 412 TFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDG 471
Query: 235 DLVLSASGDKSVHIW 249
V S DK + +W
Sbjct: 472 SRVASGGKDKVIKLW 486
Score = 65 (27.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
GH V W +D +++ S D ++ V+T + Q L PG A
Sbjct: 415 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQEL--PGHA 459
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH GV V P L + S D+TVRLWS Q G V ++GH G V + F
Sbjct: 414 YPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAF 473
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN ++SA D+ + +W
Sbjct: 474 SPNGQYLVSAGEDQLLKLW 492
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFS- 177
ND V ++ ++KVL + + +T L +S ++S + + + + + SF+
Sbjct: 317 NDTLEVDEEDRTATERKVLLGH--CGPVYSTRFLP-DSSALLSCSEDTSIRYWDLESFTN 373
Query: 178 -----GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
GH VWD+ + P SAS D T RLWS + Y+GH V+ V+F P
Sbjct: 374 TVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHP 433
Query: 233 NKDLVLSASGDKSVHIWQA 251
N + + + S DK+V +W A
Sbjct: 434 NSNYLATGSTDKTVRLWSA 452
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD+ + P SAS D T RLWS + Y+GH V+ V+F PN +
Sbjct: 377 YQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSN 436
Query: 236 LVLSASGDKSVHIWQAVIN------------WECLVXXXXXXXXXXXXKEP-----DESS 278
+ + S DK+V +W A CL ++ D +S
Sbjct: 437 YLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLAS 496
Query: 279 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323
TL K+L GH++ + + + D + +AS D ++D+++
Sbjct: 497 GTL---YKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V +A P L SA D+ ++LW +G GH+ + SV F
Sbjct: 458 VRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSL 517
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SAS D SV IW
Sbjct: 518 DSSVIASASMDNSVRIW 534
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 294 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 349
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 350 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 408
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 409 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 458
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 236 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 292
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 293 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 349
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 350 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 407
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 408 PETETCLHTL 417
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 336 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 391
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 392 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 500
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 278 IRQHRIDTNWRRGELRSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 334
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 335 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 391
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 449
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 450 PETETCLHTL 459
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 334 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 389
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 390 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 448
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 449 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 498
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 276 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 332
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 333 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 389
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 390 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 447
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 448 PETETCLHTL 457
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 336 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 391
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 392 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 451 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 500
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 278 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 334
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 335 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 391
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 449
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 450 PETETCLHTL 459
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 504 ALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 563
Query: 226 NSVRFLPNKDLVLSA-SG-DKSVHIWQAVINWECL 258
V F+ +LS SG D V +W + N EC+
Sbjct: 564 LKVVFVSRGTQLLSRPSGSDGLVKLW-TIKNNECV 597
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 139 (54.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
KI FS H V V+V P + S + D T +LW ++GKCV ++GH +N+V++
Sbjct: 183 KITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYF 242
Query: 232 PNKDLVLSASGDKSVHIW 249
PN + S D S ++
Sbjct: 243 PNGLSFGTGSDDASCRLF 260
Score = 54 (24.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
V L GH N V +DG + T SWD + ++
Sbjct: 312 VLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 141 (54.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
G ++GV VA+ P ++ + S D VRLW QTG + +Y GH SV SV F P+ +
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 238 LSASGDKSVHIW 249
S S DKS+ +W
Sbjct: 473 ASGSLDKSLKLW 484
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW----STQTGKCVLQYSGHSGSVN 226
Y + + GH D V+ VA P L S S D++++LW S +C ++GH V
Sbjct: 448 YFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL 507
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
SV F P+ ++S S D+SV W
Sbjct: 508 SVAFSPDGSWLISGSKDRSVQFW 530
Score = 99 (39.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 172 KIRSF--SGHRDG---VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
K+ +F +DG + V P L + + D+TV++W T K + GH +
Sbjct: 314 KVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIY 373
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
S+ + + ++S SGDK IW
Sbjct: 374 SLDYSSDGRFIVSGSGDKKAKIW 396
Score = 61 (26.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 287 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
E +G N V + DG V S D + L+D +TG L+ +++ + A G
Sbjct: 410 EEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDG 469
Query: 347 PIRAS 351
AS
Sbjct: 470 KSLAS 474
Score = 59 (25.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325
GH + V++ + DG +I+ S DR +D GT
Sbjct: 501 GHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGT 536
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 414 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 469
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 470 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 528
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 529 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 578
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 356 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 412
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 413 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 469
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 470 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 527
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 528 PETETCLHTL 537
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 419 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 474
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 475 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 533
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 534 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 583
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 361 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 417
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 418 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 474
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 475 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 532
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 533 PETETCLHTL 542
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
+L + D +++W QTG +L SGH V + F PN L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLN 184
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 245 CDFSPDSALLVTASYDTSVIMWDPYTGERLRSL 277
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D SV +W
Sbjct: 249 PDSALLVTASYDTSVIMW 266
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW +R ++ S S DRT+++W+ +TG+C+ GH+ +V +
Sbjct: 467 LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL-- 522
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT------------ 280
++ V+S S D ++ +W + +CL + ++
Sbjct: 523 HEKRVVSGSRDATLRVWD-IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 581
Query: 281 -LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + L GH+N V + + DG V++ S D ++DVETG + +LT
Sbjct: 582 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 631
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 49/190 (25%), Positives = 87/190 (45%)
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 213
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 409 IRQHRIDTNWRRGDLKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 465
Query: 214 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKE 273
C+ GH+G V S + N +++S S D+++ +W A EC+
Sbjct: 466 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 522
Query: 274 PDESSI------TLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
++ + TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 523 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 580
Query: 321 VETGTILQSL 330
ET T L +L
Sbjct: 581 PETETCLHTL 590
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWSTQ G V ++GH G V S+ F
Sbjct: 413 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAF 472
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 473 SPNGKYLASAGEDQRLKLW 491
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/162 (26%), Positives = 69/162 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD+ + P SAS DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 435
Query: 236 LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP---------DESSITL----- 281
+ + S DK+V +W + P ++ + L
Sbjct: 436 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323
T KEL GH++ + + + D V +AS D ++D+ +
Sbjct: 496 GTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRS 537
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 457 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 516
Query: 233 NKDLVLSASGDKSVHIW 249
+ LV SAS D SV +W
Sbjct: 517 DSSLVASASMDNSVRVW 533
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 39/154 (25%), Positives = 69/154 (44%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
++++ GH D + V P +L S S D T++LW +G GHS SV SV F
Sbjct: 33 ELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFS 92
Query: 232 PNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDES--SITLRTPVKELL 289
PN L+ S S D ++ +W + + P+ + + + +
Sbjct: 93 PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVET 323
GHS+ V++ + DG+ + + S ++ L+D T
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT 186
Score = 151 (58.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 51/183 (27%), Positives = 75/183 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ GH V VA P +L S S+D T++LW++ + GHS V SV F PN
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITL----RTPVKELL 289
L A G H + +W V E +I L +K L
Sbjct: 137 GQLWNPAIGSLK-HTIEGHSDWVLSVAFSPDGQLLASGSA--EKTIKLWDSATCGLKHTL 193
Query: 290 G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPI 348
G HSN V+ + DG + + S D L+D +G++ +L I + A G +
Sbjct: 194 GGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQL 253
Query: 349 RAS 351
AS
Sbjct: 254 LAS 256
Score = 141 (54.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH + + +A P +L S S+D T++LW T TG GHS V SV F P+
Sbjct: 234 TLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS 293
Query: 235 DLVLSASGDKSVHIW 249
L+ S SGD ++ +W
Sbjct: 294 QLLESGSGDNTIKLW 308
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 169 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
+C + GH + V + P +L S S D T++LW +G GHS + S+
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
Query: 229 RFLPNKDLVLSASGDKSVHIW 249
F PN L+ S S D ++ +W
Sbjct: 246 AFSPNGQLLASGSSDATIKLW 266
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 45/154 (29%), Positives = 61/154 (39%)
Query: 182 GVWDVAVRPGQPVLGSASADRTVRLW----STQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GV +++ V SAS D+T+ +W +T T +CV GH V + P K +
Sbjct: 155 GVAWISLNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGCIAVNPAKTQM 214
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIA 297
S S D + IW E E D +RTPV L GH V
Sbjct: 215 ASGSMDTMLKIWST----ELQADKGEPSATKKAKLEQDN----VRTPVVTLAGHREFVSG 266
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
W+ D + T SWD L+D+ G I T
Sbjct: 267 VQWI-DNTTIATCSWDHTIKLWDLSMGGIKTEFT 299
Score = 87 (35.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKD-- 235
H D V V + G + G+ D TV LW+T+ GK L GH +V V ++ N+
Sbjct: 110 HDDWVSAVQAKDGWILTGTY--DNTVNLWNTK-GKHKLTIPGHVAAVKGVAWISLNEQTG 166
Query: 236 LVLSASGDKSVHIWQ 250
+ SAS D+++ IW+
Sbjct: 167 VFASASHDQTIMIWE 181
Score = 70 (29.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
+ P+ EL+GH + V+A DW S+ + +++ D +F
Sbjct: 380 KAPIFELIGHEDKVLACDW-SNPKYILSGGSDNAVRVF 416
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 45/170 (26%), Positives = 79/170 (46%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH V V+V P + + ++S+D T+++WS T + GH ++ V++ +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 238 LSASGDKSVHIW--QAVINWECLVXXXXXXXXXXXXK--------EPDES----SITLRT 283
SAS DK++ IW + + CL DE+ ++ T
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEP 333
++ L HS +I+ +DG TAS+D +A ++DV +G L++L EP
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEP 221
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 150 NKLKVQTSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
NK + TS + K +++ + GH G+ V G L SAS D+T+R+W
Sbjct: 65 NKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
Query: 209 TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ V GH+ V+S+ F P L++S S D++V IW
Sbjct: 125 FEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 202 RTVRLWSTQTG---KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-INWEC 257
+ +R + + +G C L GH SV V PNK + ++S D ++ IW A+ EC
Sbjct: 33 KRIRNYESHSGFSEYCTL--FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC 90
Query: 258 LVXXXX--------XXXXXXXXKEPDESSITL-----RTPVKELLGHSNVVIAADWLSDG 304
+ D+ +I + R V+ L GH+N V + D+ G
Sbjct: 91 TLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG 150
Query: 305 EQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351
+++ SWD +++++ GT L+ L E I + + G + A+
Sbjct: 151 TLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCAT 197
Score = 122 (48.0 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R GH + V + P +L S S D TVR+W+ Q G C+ HS + SV
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISA 190
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ L +AS D IW V++ +CL
Sbjct: 191 DGTLCATASYDGMARIWD-VLSGQCL 215
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 143 (55.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+TV LW TG+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D SV W
Sbjct: 120 EATVILSGSIDSSVRCW 136
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 303 DGEQVITASWDRVANLFDVETGTIL 327
DG+ + +S D L D +TG +L
Sbjct: 202 DGQCTLISSLDSTLRLLDKDTGELL 226
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 143 (55.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+TV LW TG+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D SV W
Sbjct: 120 EATVILSGSIDSSVRCW 136
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 303 DGEQVITASWDRVANLFDVETGTIL 327
DG+ + +S D L D +TG +L
Sbjct: 202 DGQCTLISSLDSTLRLLDKDTGELL 226
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GHR GVW + P L S S DRT+R+W+ T +CV GH+G++ + ++ V
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQV 564
Query: 238 LSASGDKSVHIWQAVINWECL 258
+SA+ D V +W ++ + EC+
Sbjct: 565 VSAAADGLVKVW-SLSSGECV 584
Score = 118 (46.6 bits), Expect = 0.00076, P = 0.00076
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 137 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
LAS+ + LK N L Q +K S F + + I++ RD V + V ++
Sbjct: 430 LASSSQDRTLKRFN-LGSQLNK--SDFSNRAV--WTIKAHD--RD-VNAIQVSKDGRIIA 481
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 256
SAS D+T++LW + TG+ V GH V + F P + S SGD+++ IW V +
Sbjct: 482 SASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN-VDTQQ 540
Query: 257 CL 258
C+
Sbjct: 541 CV 542
Score = 116 (45.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 167 LLSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGS 224
+ Y SF GH + + Q VL S + D VRLW + + + + GHS
Sbjct: 132 IAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSV 191
Query: 225 VNSVRFLPNKDLVLSASGDKSVHIW 249
+ + F P +LS S DK+V +W
Sbjct: 192 IRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 50 (22.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
L GH+++V+ D DG + T + D L+++
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL 393
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSP 520
Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
+ L+ SAS D SV +W + N C
Sbjct: 521 DSSLIASASMDNSVRVWD-IRNTHC 544
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWDV + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 236 LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP---------DESSITL----- 281
+ + S DK+V +W A + P ++ + L
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
T KEL GH++ + + + D + +AS D ++D+
Sbjct: 500 GTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 641 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 143 (55.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 680 NGRFLATGATDGRVLLW 696
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS-------ITLRTPV 285
+ +++ S S D +V +W AV +E V P+ S +T TPV
Sbjct: 722 DGEILASGSMDNTVRLWDAVKAFED-VETDDFTTATGHINLPENSQELLLGTYMTKSTPV 780
Query: 286 KEL-LGHSNVVIAA 298
L N+V+AA
Sbjct: 781 VHLHFTRRNLVLAA 794
Score = 121 (47.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 535 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 595 PYGYYFVSGGHDRVARLW 612
Score = 56 (24.8 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITAS-------WDRVANLFDVET 323
V EL GH++ V + + DGE + + S WD V DVET
Sbjct: 704 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVET 749
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 666
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 54/223 (24%), Positives = 84/223 (37%)
Query: 132 NKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRP 190
++ + A N + T + K + K +K+ R SGH V +AV P
Sbjct: 155 DRSQPTAMNSMIMETSNTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEP 214
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
G + SADRT+++W +GK L +GH +V V + S DK V W
Sbjct: 215 GNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWD 274
Query: 251 AVINWECLVXXXXXXXXXXXXKEP----------DESS----ITLRTPVKELLGHSNVVI 296
N P D ++ + + V L GH+N V
Sbjct: 275 LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVA 334
Query: 297 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ Q+IT S D L+D+ G +LT +++RA
Sbjct: 335 TVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP 232
R+ GH D V D+A+ L S S+D +++LW QT C+ GH +V+SV FLP
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP 201
Query: 233 NKDLVLSASGDKSVHIW 249
D VLSAS D ++ W
Sbjct: 202 TGDFVLSASRDHTIKQW 218
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 173 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
++S GH V V P G VL SAS D T++ W TG CV + GH+ V +R
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVL-SASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 232 PNKDLVLSASGDKSVHIW 249
+ L SAS D++V +W
Sbjct: 243 NDGTLFASASLDQTVTVW 260
Score = 120 (47.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF-LP 232
+ +GHR + V P ++ S S D T+++W +TG+ GH+ +VN +
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
K LV S S D S+ +W ++CL
Sbjct: 160 GKQLV-SCSSDLSIKLWDFGQTYDCL 184
Score = 73 (30.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
+K L GH + V + +L G+ V++AS D +D+ TG + + + +R
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISN 243
Query: 345 GGPIRASPLL 354
G + AS L
Sbjct: 244 DGTLFASASL 253
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 123 (48.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 26/82 (31%), Positives = 37/82 (45%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R SGH V +AV P S + DRT+++W+ TG L +GH +V + P
Sbjct: 136 MRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSP 195
Query: 233 NKDLVLSASGDKSVHIWQAVIN 254
+ S DK V W N
Sbjct: 196 RHPYLFSCGEDKMVKCWDLETN 217
Score = 118 (46.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ +GH V +AV P P L S D+ V+ W +T K + Y GH V ++ P
Sbjct: 180 TLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRL 239
Query: 235 DLVLSASGDKSVHIW 249
DL+++ D +W
Sbjct: 240 DLLVTGGRDGVARVW 254
Score = 71 (30.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
R+ + L GH+ V QVIT S D L+D+ G + LT + IR+ A
Sbjct: 259 RSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLA 318
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 401 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 459
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 460 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 143 (55.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 380 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 439
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 440 NGRFLATGATDGRVLLW 456
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 481
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ +++ S S D +V +W AV +E L
Sbjct: 482 DGEILASGSMDNTVRLWDAVKAFEDL 507
Score = 121 (47.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 295 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 354
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 355 PYGYYFVSGGHDRVARLW 372
Score = 51 (23.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 379 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 426
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 145 (56.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 156 TSKIVSSFKTSLLSCYKIRS------FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST 209
+S++VS+ L + +RS GH D V+ P ++ S S D +V++W
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 210 QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
+TGKC+ S HS +++V F N L++S S D IW A + +CL
Sbjct: 153 KTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA-SGQCL 200
Score = 141 (54.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 171 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
Y +R + +GH + V P L S++AD + +W G C GHS ++ V
Sbjct: 29 YALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVA 88
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXX--XXKEP---------DES- 277
+ + ++SAS DK++ +W + + +CL P DES
Sbjct: 89 WSSDSSRLVSASDDKTLKVWD-MRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESV 147
Query: 278 SI-TLRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
I ++T +K L HS+ + A ++ +G +++ S+D + ++D +G L++L + G
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ GH + DVA L SAS D+T+++W ++GKC+ GHS V F P
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 234 KDLVLSASGDKSVHIWQ-----------------AVINWECLVXXXXXXXXXXXXKEPDE 276
+L++S S D+SV IW+ + +N+ C + D
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Query: 277 SS-ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+S LRT E G+ V + +G+ ++TA+ D L+D G L++ T
Sbjct: 195 ASGQCLRTLADE--GNPPVSFVK-FSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 247
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 35/151 (23%), Positives = 68/151 (45%)
Query: 216 LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC----------LVXXXXXX 265
L +GHS +++SV+F PN + + S++ D + IW A + C +
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAY-DGNCKKTLYGHSLEISDVAWSS 91
Query: 266 XXXXXXKEPDESSIT---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
D+ ++ +R+ +K L GHS+ V D+ +++ S+D +++
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 321 VETGTILQSLTEPGEAIRAAAGRTGGPIRAS 351
V+TG L++L+ + I A G + S
Sbjct: 152 VKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Score = 40 (19.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 285 VKELLGHSNVVIAA 298
V+ L GH++VVI+A
Sbjct: 288 VQRLQGHTDVVISA 301
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 149 (57.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 245 CDFSPDSALLVTASYDTSVIMWDPYTGERLRSL 277
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D SV +W
Sbjct: 249 PDSALLVTASYDTSVIMW 266
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 149 (57.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 245 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 277
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 249 PDSALLVTASYDTNVIMW 266
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 149 (57.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 48/175 (27%), Positives = 69/175 (39%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD V V L S S D T+ +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVK------- 286
L+ S S DK+V IW + E V D S+ + K
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 287 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG 187
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/186 (24%), Positives = 71/186 (38%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDES--SIT 280
+++AS DK+V +W INW C + T
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
R + H V D+ G + A D ++D T +LQ A+ A
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNAL 235
Query: 341 AGRTGG 346
+ G
Sbjct: 236 SFHPSG 241
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 50/171 (29%), Positives = 74/171 (43%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ ++ +AS D+TV++WST + + + H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSLV-TASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSIT---LRTPVK-------ELLGH----SNVV 295
EC+ P + I + VK LL H S V
Sbjct: 174 KTSR-ECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV 232
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
A + G +ITAS D + D+ G +L +L G A A RTG
Sbjct: 233 NALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 283
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S + H + V P ++ SAS D+TV+LW + +C+ Y H G V V F P+
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSG 199
Query: 235 DLVLSASGDKSVHIWQA 251
+ +A D +V +W A
Sbjct: 200 TCIAAAGMDNTVKVWDA 216
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 145 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 202
K +L V S K V + + C I S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSREC--IHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
TV++W +T + + Y HS +VN++ F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 279
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWSTQ G V ++GH G V ++ F
Sbjct: 417 YPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAF 476
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 520
Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
+ L+ SAS D SV +W + N C
Sbjct: 521 DSSLIASASMDNSVRVWD-IRNTYC 544
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD+ + P SAS DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSN 439
Query: 236 LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP---------DESSITL----- 281
+ + S DK+V +W + P ++ + L
Sbjct: 440 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
T KEL GH++ + + + D + +AS D ++D+
Sbjct: 500 GTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVNSVRFLPN-KDL 236
DGV VA+ P + + S D+TVR+W T TG V + GH SV SV F PN K+L
Sbjct: 400 DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKEL 459
Query: 237 VLSASGDKSVHIWQ 250
V S S DK++ +W+
Sbjct: 460 V-SGSLDKTIKLWE 472
Score = 131 (51.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R+F GH+D V V + P + S S DR V+ W TG + GH SV SV P
Sbjct: 491 RTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPT 550
Query: 234 KDLVLSASGDKSVHIWQ 250
+L + SGD IW+
Sbjct: 551 GNLFATGSGDMRARIWR 567
Score = 120 (47.3 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----------GKCVLQYSG 220
++ + GH+D V+ VA P L S S D+T++LW GKC + G
Sbjct: 436 RLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEG 495
Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
H V SV P+ V+S S D+ V W +
Sbjct: 496 HKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPI 527
Score = 112 (44.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
FSGH ++ + + S S D+TVRLW GK V S G V +V P+
Sbjct: 354 FSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGL 412
Query: 236 LVLSASGDKSVHIWQAVINW 255
V + S DK+V +W +
Sbjct: 413 YVAAGSLDKTVRVWDTTTGY 432
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
GH + V++ DG V++ S DR +D TG L I A TG
Sbjct: 495 GHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTG 551
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 40 KLSNLGDQDLSMLR-THLNSEYDDVVLPSSVKFKLNSLFSQIEREF 84
+L + G S L T N+ V P+S +LN L Q+ +EF
Sbjct: 11 RLPSSGRAQTSQLPLTMYNAHRGMVPAPNS---RLNELLDQLRQEF 53
Score = 37 (18.1 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
L GH N VI+ G T S D A ++
Sbjct: 535 LQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 142 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 201
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 202 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 261
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 262 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 294
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 165 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 224
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 225 DCSMLCSAAGEKSVFLW 241
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 206 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 265
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 266 PDSALLVTASYDTNVIMW 283
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSF 476
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWDV + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 236 LVLSASGDKSVHIWQA 251
+ + S DK+V +W A
Sbjct: 440 YLATGSTDKTVRLWSA 455
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V ++ P L SA D+ ++LW +G + GH+ S+ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP 520
Query: 233 NKDLVLSASGDKSVHIW 249
+ L+ SAS D SV +W
Sbjct: 521 DSGLIASASMDNSVRVW 537
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 520
Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
+ L+ SAS D SV +W + N C
Sbjct: 521 DSGLIASASMDNSVRVWD-IRNTYC 544
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD+ + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 236 LVLSASGDKSVHIWQA 251
+ + S DK+V +W A
Sbjct: 440 YLATGSTDKTVRLWSA 455
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/180 (26%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 200 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSAR 259
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DESS----I 279
+ S DK V W N P D ++ +
Sbjct: 260 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 319
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ V L GH+N V + QV+T S D L+D+ G +LT +++RA
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 379
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +V+
Sbjct: 283 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQA 342
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ V++ S D ++ +W V
Sbjct: 343 AEPQVVTGSHDTTIRLWDLV 362
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 435 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 494
Query: 231 LPNKDLVLSASGDKSVHIW 249
PN + SA D+ + +W
Sbjct: 495 SPNGKYLASAGEDQRLKLW 513
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 479 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 538
Query: 233 NKDLVLSASGDKSVHIWQAVINWEC 257
+ L+ SAS D SV +W + N C
Sbjct: 539 DSSLIASASMDNSVRVWD-IRNTYC 562
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD+ + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 457
Query: 236 LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP---------DESSITL----- 281
+ + S DK+V +W A + P ++ + L
Sbjct: 458 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 517
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
T KEL GH++ + + + D + +AS D ++D+
Sbjct: 518 GTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH V RF PN +
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 597 YVATGSSDRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
+ EL GH+ + A + DGE + + S D L+DV
Sbjct: 656 HGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + S+DRTVRLW G CV ++GH G ++S+ F P
Sbjct: 576 LRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 635
Query: 233 NKDLVLSASGDKSVHIW 249
N + S S D V +W
Sbjct: 636 NGKFLASGSTDGRVLLW 652
Score = 129 (50.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + +A P L S S D V LW G + + GH+G++ +++F
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSR 677
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ +++ S S D +V +W +
Sbjct: 678 DGEIIASGSIDNTVRLWDVM 697
Score = 126 (49.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 135 KVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV 194
K L SA L +K + + KTS S KI GH V+ V+ P +
Sbjct: 458 KKLRKVKSAADLNLIDKESDDVLERIMDEKTSSES--KI--LHGHSGPVYGVSFSPDRNY 513
Query: 195 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
L S+S D T+RLWS QT C++ Y GH+ V +F P +S D+ +W
Sbjct: 514 LLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLW 568
Score = 58 (25.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 19/68 (27%), Positives = 27/68 (39%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR 343
P++ GH V + + V T S DR L+DV G ++ T I + A
Sbjct: 575 PLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFS 634
Query: 344 TGGPIRAS 351
G AS
Sbjct: 635 PNGKFLAS 642
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 245 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 277
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 249 PDSALLVTASYDTNVIMW 266
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+SL
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 279
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/175 (26%), Positives = 72/175 (41%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD V V L S S D T+ +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXX---------KEPDESSITLRTP 284
L+ S S DK+V IW + E V D+ ++ + +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 285 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
++ L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/186 (25%), Positives = 72/186 (38%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDES--SIT 280
L+++AS DK+V +W INW C + T
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
R V H V D+ G + A D ++D T ++Q A+ A
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNAL 235
Query: 341 AGRTGG 346
+ G
Sbjct: 236 SFHPSG 241
Score = 131 (51.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 50/171 (29%), Positives = 75/171 (43%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ +L +AS D+TV++WST + + + H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQ-LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSI-------TLR---TPVKELLGH----SNVV 295
EC+ P + I T++ T L+ H S V
Sbjct: 174 KTSR-ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAV 232
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
A + G +ITAS D + D+ G +L +L G A A RTG
Sbjct: 233 NALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 283
Score = 121 (47.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 145 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 202
K +L V S K V + + C + S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
TV++W T+T + V Y HS +VN++ F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 639 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 697
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 698 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 618 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 677
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 678 NGRFLATGATDGRVLLW 694
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 719
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS-------ITLRTPV 285
+ +++ S S D +V +W A+ +E L P+ S +T TPV
Sbjct: 720 DGEILASGSMDNTVRLWDAIKAFEDL-ETDDFTTATGHINLPENSQELLLGTYMTKSTPV 778
Query: 286 KEL-LGHSNVVIAA 298
L N+V+AA
Sbjct: 779 VHLHFTRRNLVLAA 792
Score = 121 (47.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 533 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 592
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 593 PYGYYFVSGGHDRVARLW 610
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 617 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 664
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 641 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 680 NGRFLATGATDGRVLLW 696
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS-------ITLRTPV 285
+ +++ S S D +V +W A+ +E L P+ S +T TPV
Sbjct: 722 DGEILASGSMDNTVRLWDAIKAFEDL-ETDDFTTATGHINLPENSQELLLGTYMTKSTPV 780
Query: 286 KEL-LGHSNVVIAA 298
L N+V+AA
Sbjct: 781 VHLHFTRRNLVLAA 794
Score = 121 (47.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 535 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 595 PYGYYFVSGGHDRVARLW 612
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 666
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 642 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 621 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 681 NGRFLATGATDGRVLLW 697
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS-------ITLRTPV 285
+ +++ S S D +V +W AV +E L P+ S +T TPV
Sbjct: 723 DGEILASGSMDNTVRLWDAVKAFEDL-ETDDFTTATGHINLPENSQELLLGTYMTKSTPV 781
Query: 286 KEL-LGHSNVVIAA 298
L N+V+AA
Sbjct: 782 VHLHFTRRNLVLAA 795
Score = 121 (47.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 536 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 596 PYGYYFVSGGHDRVARLW 613
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 620 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 667
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 118 CNDMECVTNMNKNFNKQKVLASNPS--AQKLKTTNKLKVQT--SKIVSSFKTSLLSCYKI 173
C D+ + + + K + + + A L +KL S+ + + L C I
Sbjct: 38 CGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKC--I 95
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP- 232
RS+ GH V +A +L +A ADR V +W G C + GH G V+S+ F P
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 233 -NKDLVLSASGDKSVHIW 249
NK++++S S D +V +W
Sbjct: 156 SNKNILISGSDDATVRVW 173
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 152 LKVQTS-KIVSSFKTSLLSCYKIRSFSGHRDGVW--DVAVRP-GQPVLGSASADRTVRLW 207
L V T+ + V + + +SC + +GH++ V D V G ++ + S D+TVRLW
Sbjct: 374 LAVATNLEEVRVYDVATMSCSYV--LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLW 431
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAV-INWECLVXXXXXX 265
+ + C+ +GH+G + +V F +S SGD+++ +W I+ +
Sbjct: 432 NATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKT 491
Query: 266 XXXXXXKEPDESSITLRTPVKELLGHSNVVIAADW-LSDGEQVITASWDRVANLFDVETG 324
+ D +S+ + + S A+ W L D V+T + +F VE
Sbjct: 492 RSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK-RRIFSVEFS 550
Query: 325 TILQS-LTEPGE 335
T+ Q +T G+
Sbjct: 551 TVDQCVMTASGD 562
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDV 321
H + V + DG + +A D+V NL+D+
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 42 (19.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 286 KELLGHSNVVIAADWLSDGEQVITASWD-RVANLFDVET 323
K L+G++ + +L D EQ + + + ++DV T
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVAT 390
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/180 (26%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DESS----I 279
+ S DK V W N P D ++ +
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ V L GH+N V + Q+IT S D L+D+ G +LT +++RA
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 280 IRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 339
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ +++ S D ++ +W V
Sbjct: 340 AEPQIITGSHDTTIRLWDLV 359
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/180 (26%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DESS----I 279
+ S DK V W N P D ++ +
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 316
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ V L GH+N V + Q+IT S D L+D+ G +LT +++RA
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 280 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 339
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ +++ S D ++ +W V
Sbjct: 340 AEPQIITGSHDTTIRLWDLV 359
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/180 (26%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 257
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DESS----I 279
+ S DK V W N P D ++ +
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ V L GH+N V + Q+IT S D L+D+ G +LT +++RA
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 281 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 340
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ +++ S D ++ +W V
Sbjct: 341 AEPQIITGSHDTTIRLWDLV 360
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/180 (26%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 199 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 258
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEP----------DESS----I 279
+ S DK V W N P D ++ +
Sbjct: 259 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 318
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ V L GH+N V + Q+IT S D L+D+ G +LT +++RA
Sbjct: 319 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 378
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 282 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 341
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ +++ S D ++ +W V
Sbjct: 342 AEPQIITGSHDTTIRLWDLV 361
>SGD|S000005798 [details] [associations]
symbol:YTM1 "Constituent of 66S pre-ribosomal particles"
species:4932 "Saccharomyces cerevisiae" [GO:0070545 "PeBoW complex"
evidence=IDA;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] [GO:0051276 "chromosome
organization" evidence=IGI] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000005798 GO:GO:0005654 EMBL:BK006948
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042273 GO:GO:0030687 GO:GO:0051276 GO:GO:0006364
GO:GO:0070545 EMBL:X89633 KO:K00791 RefSeq:NP_014917.3
GeneID:854448 KEGG:sce:YOR274W InterPro:IPR012972 Pfam:PF08154
RefSeq:NP_014915.3 GeneID:854446 KEGG:sce:YOR272W KO:K14863
HOGENOM:HOG000264464 HAMAP:MF_03029 GeneTree:ENSGT00640000091456
OMA:DNSIGFW OrthoDB:EOG4GQTDF EMBL:U92821 EMBL:Z75180 PIR:S67174
ProteinModelPortal:Q12024 SMR:Q12024 DIP:DIP-6484N IntAct:Q12024
MINT:MINT-655357 STRING:Q12024 PaxDb:Q12024 PeptideAtlas:Q12024
EnsemblFungi:YOR272W CYGD:YOR272w NextBio:976700
Genevestigator:Q12024 GermOnline:YOR272W Uniprot:Q12024
Length = 460
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 55/199 (27%), Positives = 89/199 (44%)
Query: 148 TTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
T L + S V + L Y + SFS + D V + V G + S S D VR W
Sbjct: 73 TKKGLSSEASLNVEYTRAILPPSY-LNSFS-NEDWVSSLDVGDGSKHIISGSYDGIVRTW 130
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXX 267
+G QYSGHSG + +V+++ N LV SA D+++ +W+ N + +
Sbjct: 131 DL-SGNVQKQYSGHSGPIRAVKYISNTRLV-SAGNDRTLRLWKTK-NDDLKLTSQQQAQE 187
Query: 268 XXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV---ETG 324
+ DE +I + L GH V++ D +SD ++++AS+D + E
Sbjct: 188 D----DDDEVNIEDGKTLAILEGHKAPVVSID-VSDNSRILSASYDNSIGFWSTIYKEMT 242
Query: 325 TI--LQSLTEPGEAIRAAA 341
+ L+ + P I AA
Sbjct: 243 VVDPLEDINNPNNKISTAA 261
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/186 (25%), Positives = 73/186 (39%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 235 DLVLSASGDKSVHIWQAV-----------INWECLVXXXXXXXXXXXXKEPDESSI---T 280
+++AS DK+V +W INW + + T
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
R V H V D+ G + AS D ++DV T +LQ A+ A
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 341 AGRTGG 346
+ G
Sbjct: 236 SFHPSG 241
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 46/175 (26%), Positives = 68/175 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD + V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVK------- 286
L+ S S DK+V IW + E V D S+ + K
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 287 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/171 (30%), Positives = 75/171 (43%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ ++ +AS D+TV++WST K + S H V RF P+ L++SAS DK+V +W
Sbjct: 115 GQSLV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSI---TLRTPVK-------ELLGH----SNVV 295
EC+ P + I ++ VK LL H S V
Sbjct: 174 KTSR-ECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
A + G ++TAS D + D+ G +L +L G A A RTG
Sbjct: 233 NALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 283
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 235 DLVLSASGDKSVHIW 249
+ +AS D +V +W
Sbjct: 200 TCIAAASMDNTVKVW 214
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 223
KTS C + S+ H V V P + +AS D TV++W +T + + Y HS
Sbjct: 174 KTSR-EC--VHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 224 SVNSVRFLPNKDLVLSASGDKSVHI 248
+VN++ F P+ + +L+AS D ++ I
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKI 255
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 135 (52.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D SV W
Sbjct: 120 EATVILSGSIDSSVRCW 136
Score = 48 (22.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 303 DGEQVITASWDRVANLFDVETGTILQSLT 331
DG+ + +S D L D +TG +L T
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYT 230
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V +A P L SAS D TV+LW GK + +++ H+ +VN V+F PN+
Sbjct: 143 YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D++V +W
Sbjct: 203 LLASGSADRTVKLW 216
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 153 KVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT 211
+V + S + L KI R+ GH+ + + P L S S D ++LW +
Sbjct: 77 RVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Query: 212 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
CV +Y GH+ +V + F P+ + SAS D +V +W +
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 51/181 (28%), Positives = 71/181 (39%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 202 RVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNR 261
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD-ESSIT-----------L 281
+ S DK V W N P + +T +
Sbjct: 262 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDI 321
Query: 282 RTP--VKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTEPGEAIR 338
RT V L GH+N V S QV+T S D L+D+ G +LT +++R
Sbjct: 322 RTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVR 381
Query: 339 A 339
A
Sbjct: 382 A 382
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 108 ESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ-KLKTTNKLKV---QTSKIVSSF 163
E I+ K P C + +M + +Q S+ +A + +TT KV + K+ S++
Sbjct: 229 EQHIDRKCPNCGWGLPLLHMKRARIQQNSTGSSSNADIQTQTTRPWKVIYRERFKVESNW 288
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 223
+ C +I+ F GH DGV + ++ +L + S D T+ +W TGK + + SGHS
Sbjct: 289 RKG--HC-RIQEFKGHMDGV--LTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSD 343
Query: 224 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V ++ F K +++ S DK++ +W I EC+
Sbjct: 344 GVKTLYFDDRK--LITGSLDKTIRVWN-YITGECI 375
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR SGH DGV + + + GS D+T+R+W+ TG+C+ Y GHS SV SV
Sbjct: 335 IRRLSGHSDGVKTLYFDDRKLITGSL--DKTIRVWNYITGECISTYRGHSDSVLSVDSY- 391
Query: 233 NKDLVLSASGDKSVHIW 249
+ +++S S DK+V +W
Sbjct: 392 -QKVIVSGSADKTVKVW 407
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I ++ GH D V ++V Q V+ S SAD+TV++W ++ C GH+ VN V+ P
Sbjct: 375 ISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVESRTCYT-LRGHTEWVNCVKLHP 431
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
S S D ++ +W N CL
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTN-SCL 456
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 137 (53.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 74 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 132
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 133 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 147 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 206
Query: 236 LV 237
L+
Sbjct: 207 LL 208
Score = 97 (39.2 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+L + D V LWS C++ +GH+ V SVR ++L+++ S S+ +W
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 94
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
++ L+GH + + D+ GE V + S D L+D+
Sbjct: 102 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 138
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
C + F+GH+ G+W V P +L ++SAD T++LW Q C+ + GH SV +
Sbjct: 522 CSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKII 581
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECL 258
F+ +LS D + +W N EC+
Sbjct: 582 FVSRGTQLLSGGSDGLLKLWTIKTN-ECV 609
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 134 (52.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D S+ W
Sbjct: 120 EATVILSGSIDSSIRCW 136
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 303 DGEQVITASWDRVANLFDVETGTILQSLT 331
DG+ + +S D L D +TG +L T
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYT 230
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 137 (53.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 129 (50.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGD 243
L+ S S D
Sbjct: 203 LLASGSSD 210
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 169 SCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 227
+ +K++ H V + + + +L + D V LWS C++ +GH+ V S
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 228 VRFLPNKDLVLSASGDKSVHIW 249
VR ++L+++ S S+ +W
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVW 90
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
++ L+GH + + D+ GE V + S D L+D+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 144 (55.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 178
+D ECVT + + N+ K +A PS L T ++ K + + + C + S
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LSS 148
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 236
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 237 VLSASGDKSVHIWQ 250
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 121 (47.7 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 227
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 228 VRFLPNKDLVLSASGDKSVHIWQA--VINWECL 258
V + P+ +L+ + S DKSV +W+ +EC+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Score = 39 (18.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
V L H+ V W E + +AS+D L+ E
Sbjct: 143 VSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE 180
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH VN R+ PN +
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN 641
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
V + S D++V +W V+N C+ + P+ + + L
Sbjct: 642 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ V + + DGE + + S D L+D
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 681 NGRFLATGATDGRVLLW 697
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESS-------ITLRTPV 285
+ +++ S S D +V +W AV +E L P+ S +T TPV
Sbjct: 723 DGEILASGSMDNTVRLWDAVKAFEDL-ETDDFTTATGHINLPENSQELLLGTYMTKSTPV 781
Query: 286 KEL-LGHSNVVIAA 298
L N+V+AA
Sbjct: 782 VHLHFTRRNLVLAA 795
Score = 121 (47.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 536 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 596 PYGYYFVSGGHDRVARLW 613
Score = 52 (23.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
P++ GH V + + V T S DR L+DV G ++ T
Sbjct: 620 PLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFT 667
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 133 (51.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 43/177 (24%), Positives = 75/177 (42%)
Query: 171 YK-IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
YK I + GH + V P LG++SAD+TV++W+ C +GH VN
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT--------- 280
+ + +++AS DK++ I++ P S +
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 281 ---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
+RT VK L HS+ V A + DG + + S+D + ++D G +++L +
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD 245
Score = 131 (51.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 108 ESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQT------SK-IV 160
+SI K+ C ++ +K + S+ S ++ T +KL V SK IV
Sbjct: 80 KSISAVKFSPCGKFLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDFAWSADSKSIV 137
Query: 161 SSFKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 214
++ L Y++ ++ GH + V+ P ++ S S D +VR+W +TG C
Sbjct: 138 TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMC 197
Query: 215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
V HS V++V F + L+ S S D V IW N +C+
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA-NGQCV 240
Score = 101 (40.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 231
+++ H D V V+ ++ S S D VR+W T G+CV + V V+F
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFS 257
Query: 232 PNKDLVLSASGDKSVHIW 249
PN +LS++ D ++ +W
Sbjct: 258 PNGKYILSSNLDNTLKLW 275
Score = 53 (23.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 285 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
+K+ GH N I A++ ++ G+ +I+ S D +++++T ++QSL +A+ A+
Sbjct: 283 LKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIAS 341
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQ 328
VK L+ N +A + +G+ +++++ D L+D G L+
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLK 284
Score = 40 (19.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 285 VKELLGHSNVVIAAD 299
V+ L GH+ VIA+D
Sbjct: 328 VQSLEGHTQAVIASD 342
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 48/153 (31%), Positives = 79/153 (51%)
Query: 99 DMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSK 158
D ++ DRE+ + E+ E DM +T+ + + N K + N Q+++ N ++ K
Sbjct: 424 DSVISLFDREATV-ERLIEEEDM--ITSFSLS-NDNKYILVNLLNQEIRLWN-IEGDP-K 477
Query: 159 IVSSFKTSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 217
IVS +K S + IRS F G++ Q + S S D V +W TGK +++
Sbjct: 478 IVSRYKGHKRSRFIIRSCFGGYK-----------QAFIASGSEDSQVYIWHRSTGKLIVE 526
Query: 218 YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW 249
GH+G+VN V + P N ++ SAS D ++ IW
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 149 (57.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 166 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
SLL+ + ++ GH VWDV P S S D+T RLW+T + + + + GH V
Sbjct: 478 SLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDV 537
Query: 226 NSVRFLPNKDLVLSASGDKSVHIW 249
+ V+F PN + V + S D++V +W
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLW 561
Score = 148 (57.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 49/192 (25%), Positives = 78/192 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
RS GH V+ A P +L S S D T+RLWS T CV+ Y GH V VRF P+
Sbjct: 444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH 503
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI-------TLRT--- 283
+S S DK+ +W N V P+ + + T+R
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 284 ----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
V+ + GH V + + + G + + S D ++D+ G+++ +L +
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTT 623
Query: 340 AAGRTGGPIRAS 351
G + A+
Sbjct: 624 ITFSRDGTVLAA 635
Score = 135 (52.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F GH V V P + + S+DRTVRLW TG+ V +GH GSV+S+ F
Sbjct: 527 LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSA 586
Query: 233 NKDLVLSASGDKSVHIW 249
+ S S D ++ IW
Sbjct: 587 CGRYLASGSVDHNIIIW 603
Score = 41 (19.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V LL H++ V + DG + A D L+D
Sbjct: 611 VTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 113 (44.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP 347
L GH N ++ W SDG Q+++AS D+ +DVETG ++ + E + + GP
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 348 IRASPLLLA 356
PL+++
Sbjct: 152 ----PLIIS 156
Score = 113 (44.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 170 CYKIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
C GH++ + D+ G ++ SAS D+TVR W +TGK + + + HS VNS
Sbjct: 86 CKNFMVLKGHKNAILDLHWTSDGSQIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Query: 229 RFLPNK---DLVLSASGDKSVHIW 249
P + L++S S D + +W
Sbjct: 145 --CPTRRGPPLIISGSDDGTAKLW 166
Score = 105 (42.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGH 221
+TS L I SGH V+ + P ++ S S DR + LW G C + GH
Sbjct: 38 RTSSLEA-PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGH 95
Query: 222 SGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++ + + + ++SAS DK+V W
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAW 123
Score = 72 (30.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ SG R W G +RT L + ++ SGH +V +++F P
Sbjct: 11 ALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAP-----IMLLSGHPSAVYTMKFNPAG 65
Query: 235 DLVLSASGDKSVHIWQAVINWEC 257
L+ S S D+ + +W+ ++ +C
Sbjct: 66 TLIASGSHDREIFLWR--VHGDC 86
Score = 51 (23.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 295 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
++ W DG +V S DR+ +++D + + L PG
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL--PG 312
>UNIPROTKB|F1SGX1 [details] [associations]
symbol:CHAF1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:CU638724 ProteinModelPortal:F1SGX1 Ensembl:ENSSSCT00000013188
Uniprot:F1SGX1
Length = 559
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 195 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 247
L SA D TVR+W + G K ++++ + H+ +VN VRF PN +++ S D +
Sbjct: 32 LASAGVDTTVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 248 IWQAVINWECLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGE 305
+W+ N E ++ DE+ + T VK L GH V W +DG
Sbjct: 92 LWKVNDNKE---------PEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWAADGN 142
Query: 306 QVITASWDRVANLFDVETGTILQSLTE 332
+ +AS D A ++DV G + E
Sbjct: 143 VMASASVDNTAIIWDVSKGQKISIFNE 169
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH + V V +L SAS D TV++W T TG GH+ SV SV F +
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 235 DLVLSASGDKSVHIWQAVINW---------ECLVXXXXXXXXXXXXKEPDESSITL---R 282
L+ S S D++V IW+ + ++ D ++ + R
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Query: 283 T-PVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
T ++ +L GH + V + + D + +AS DR ++ TG++ ++L + +R+
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRS 478
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 48/170 (28%), Positives = 70/170 (41%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+F H D V V+ L SAS V++W T+TG GH VNSV F P+
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 235 DLVLSASGDKSVHIWQAVI-----------NWECLVXXXXXXXXXXXXKEPDESSI--TL 281
L+ SAS D++V IW A +W V + I T
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 282 RTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
P++ L H N V + + D + +AS D ++D TG++ +L
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTL 553
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 53/182 (29%), Positives = 74/182 (40%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH D V V+ P +L SAS DRTV++W TG GH+ V SV F + L+
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 238 LSASGDKSVHIWQ-AVI----------NWECLVXXXXXXXXXXXXKEPDESSI--TLRTP 284
SAS D +V IW A + NW V + I T
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 285 VKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE-AIRAAAG 342
++ L GH + V + + D + +AS D ++ TGT+ + G AI A
Sbjct: 549 LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFS 608
Query: 343 RT 344
T
Sbjct: 609 HT 610
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/77 (40%), Positives = 39/77 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ H + V V +L SAS D TV++W T TG GH VNSV F P+
Sbjct: 510 NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDS 569
Query: 235 DLVLSASGDKSVHIWQA 251
L+ SAS D +V IW A
Sbjct: 570 RLLASASDDGTVKIWYA 586
Score = 127 (49.8 bits), Expect = 0.00022, P = 0.00022
Identities = 44/180 (24%), Positives = 72/180 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R GH D V V ++ S S DRTVR+W T TG + H SV +V F +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 234 KDLVLSASGDKSVHIW-------QAVINW--ECLVXXXXXXXXXXXXKEPDESSITLRTP 284
+ SAS +V IW Q V+ +C+ D+ ++ +
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA 460
Query: 285 V-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+ L GH++ V + + D + +AS D ++D T + +L +R+
Sbjct: 461 ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRS 520
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 134 (52.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D S+ W
Sbjct: 120 EATVILSGSIDSSIRCW 136
Score = 46 (21.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 303 DGEQVITASWDRVANLFDVETGTIL 327
DG+ + +S D L D +TG +L
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELL 226
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 145 (56.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+ + +GH D + D ++ +ASAD T R++S T KC+ + GH G ++ + F P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ +L+ S DK+ IW A +CL
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTG-QCL 380
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/206 (24%), Positives = 85/206 (41%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 198
+NP K+ T + K T K+ S +T CY +F GH + ++ P ++ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWS-VETG--KCY--HTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA------- 251
S D T +LW Q G+ V GHS + S+ F + D +++ S D +V +W A
Sbjct: 196 SMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVN 255
Query: 252 VINWECLVXXXXXXX---XXXXXKEPDES----SITLRTPVKELLGHSNVVIAADWLSDG 304
++ C D++ T V L GH + ++ + + G
Sbjct: 256 ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTG 315
Query: 305 EQVITASWDRVANLFDVETGTILQSL 330
+ + TAS D A +F T + L
Sbjct: 316 KLIATASADGTARIFSAATRKCIAKL 341
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS 222
F + C I GH + ++ P L + S+D+T R+W QTG+C+ GH+
Sbjct: 330 FSAATRKC--IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHT 387
Query: 223 GSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
+ S F ++V++ S D + IW+
Sbjct: 388 DEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 149 TNKLKVQTSKIVSSF-KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
T ++K+ ++ + S + Y + H + +VA+ + S DRT +LW
Sbjct: 60 TEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLW 119
Query: 208 STQTGKCVLQYSGHSGSVNSVRFL-PNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXX 266
T +G+ + GH V ++ F P D + + S DK+ +W +V +C
Sbjct: 120 DTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW-SVETGKCYHTFRGHTA 178
Query: 267 XXXXXKEPDESSI----TLRTPVK-----------ELLGHSNVVIAADWLSDGEQVITAS 311
+S++ ++ T K L GHS +I+ + + G+++IT S
Sbjct: 179 EIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 312 WDRVANLFDVETG 324
+D ++D +TG
Sbjct: 239 FDHTVVVWDADTG 251
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
L GH++ + + + G VIT S D ++
Sbjct: 383 LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 129 (50.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 189 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSV 246
R G P L SAS D T R+W+ TG+ SGH GSV+ VR+ +V +AS DK+V
Sbjct: 253 RDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTV 312
Query: 247 HIWQAV 252
+W AV
Sbjct: 313 KVWDAV 318
Score = 103 (41.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGH 221
FK +S R GH + + P L + S D T R+W +TG GH
Sbjct: 136 FKVQAVSRLAHR-IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGH 194
Query: 222 SGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+G V V + P+ + + S DK+V IW
Sbjct: 195 AGWVLGVSWSPDGTRLATCSMDKTVRIW 222
Score = 59 (25.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
+ L GH V + +D ++TAS D +++V TG + L PG
Sbjct: 448 INTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDL--PG 495
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH VW + SAS D T ++W + +C GH+ SVNS+ F P
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498
Query: 235 DLVLSASGDKSVHIWQA 251
+++L+AS DK++ +W A
Sbjct: 499 NILLTASADKTLSVWDA 515
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH D V + P +L +ASAD+T+ +W +TGKC GH SVN F P ++
Sbjct: 484 GHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHII 543
Query: 238 LSASGDKSVHIW 249
S +W
Sbjct: 544 ASCDARGVTKLW 555
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
SGH D + P L ++S D T++LW G+C L GH+ +V S + D
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 237 VLSASGDKSVHIW 249
V SAS D + IW
Sbjct: 459 VASASLDMTSKIW 471
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 42/160 (26%), Positives = 67/160 (41%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH VWD P S DR RLW+T + + ++GH V RF PN +
Sbjct: 561 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 620
Query: 236 LVLSASGDKSVHIWQAVINWECL-VXXXXXXXXXXXXKEPD---------ESSITL---- 281
+ + S D++V +W V+N C+ + P+ + + L
Sbjct: 621 YIATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIG 679
Query: 282 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
V EL GH++ + A + DGE + + S D L+D
Sbjct: 680 HGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 600 LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Query: 233 NKDLVLSASGDKSVHIW 249
N + + + D V +W
Sbjct: 660 NGRFLATGATDGRVLLW 676
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R F+GH+ + +A P L + + D V LW G V + GH+ ++ ++RF
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR 701
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ +++ S S D +V +W AV +E L
Sbjct: 702 DGEILASGSMDNTVRLWDAVKAFEDL 727
Score = 120 (47.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+++ GH V+ + P + L S S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 515 ELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 574
Query: 232 PNKDLVLSASGDKSVHIW 249
P +S D+ +W
Sbjct: 575 PYGYYFVSGGHDRVARLW 592
Score = 53 (23.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGR 343
P++ GH V + + + T S DR L+DV G ++ T I + A
Sbjct: 599 PLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFS 658
Query: 344 TGGPIRAS 351
G A+
Sbjct: 659 PNGRFLAT 666
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 236 LVLSASGDKSVHIW 249
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 145 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 203
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 41/175 (23%), Positives = 75/175 (42%)
Query: 172 KIRSFSGHRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
++ + GHR+ V+ +A P + + S D+T +LWS +TGKC + GH+ + + F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 231 LPNKDLVLSASGDKSVHIWQAVINWEC---------LVXXXXXXXXXXXXKEPDESSITL 281
P LV + S D + +W E ++ + ++T+
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Query: 282 -----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
V L+GH + +A + D ++T S D+ L+D G + +LT
Sbjct: 246 WEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300
Score = 143 (55.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+ + +GH D + D ++ +ASAD T R++S T +CV + GH G ++ + F P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ +L+ S DK+ IW A +CL
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTG-QCL 380
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 49/204 (24%), Positives = 86/204 (42%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 198
+NP K+ T + K T K+ S +T CY +F GH + ++ P ++ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWS-VETG--KCY--HTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA------- 251
S D T +LW Q+G+ V +GHS + S+ F + + +++ S D +V +W+A
Sbjct: 196 SMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY 255
Query: 252 ------------VINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIAAD 299
V NW+C + + V L GH + ++ +
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKC-----VATLTGHDDEILDSC 310
Query: 300 WLSDGEQVITASWDRVANLFDVET 323
+ G+ + TAS D A +F T
Sbjct: 311 FDYTGKLIATASADGTARIFSAAT 334
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 163 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS 222
F + C + GH + ++ P L + S+D+T R+W QTG+C+ GH+
Sbjct: 330 FSAATREC--VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHT 387
Query: 223 GSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
+ S F D++++ S D + IW+
Sbjct: 388 DEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 39 (18.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
L GH++ + + + G+ +IT S D ++
Sbjct: 383 LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 173 IRSFSGHRDGVWDVAVR----PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
IR++ G G+ +R P + + S DR+V +W +TGK + + GH G+VN V
Sbjct: 274 IRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDV 333
Query: 229 RFLPNKD-LVLSASGDKSV 246
RF PN + +++SAS D+++
Sbjct: 334 RFTPNNEPIIVSASSDRNL 352
Score = 119 (46.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
C SGH+ + D+ + SASAD T+ W ++G+ + +Y GH +NSV
Sbjct: 99 CENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVE 158
Query: 230 FLPN-KDLVLSASGDKSVHIW 249
+++++SAS D ++ IW
Sbjct: 159 ISKRGQEMLVSASDDGTMGIW 179
Score = 103 (41.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SG 220
+TS L+ I +GH V+ V P + S S DR++ LW+T G+C Y SG
Sbjct: 51 RTSGLNA-PIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY-GQCE-NYGILSG 107
Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
H G++ +++ + + SAS D ++ W
Sbjct: 108 HKGAILDLQWSRDSKTIFSASADMTLASW 136
Score = 64 (27.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
+G +I A W G+++ S DR ++D +TG IL L PG
Sbjct: 282 VGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKL--PG 325
Score = 43 (20.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
V + GH + + + + D + +++ S+D +D+
Sbjct: 228 VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDI 264
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 131 (51.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 233 NKDLVLSASGDKSVHIW 249
++LS S D ++ W
Sbjct: 120 EATVILSGSIDSTIRCW 136
Score = 48 (22.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 303 DGEQVITASWDRVANLFDVETGTILQSLT 331
DG+ + +S D L D +TG +L T
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYT 230
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 178
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 236
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 237 VLSASGDKSVHIWQ 250
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 121 (47.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 227
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 228 VRFLPNKDLVLSASGDKSVHIWQA--VINWECL 258
V + P+ +L+ + S DKSV +W+ +EC+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
V L H+ V W E + +AS+D L+ E
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE 180
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 114 KYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYK- 172
K PE +D + V K F K + +N +KL V S + + S K
Sbjct: 347 KVPE-SDADKVAMAKKRFEKAATI-NNKIVEKL-------VSASDDFTMYLWDPESSSKP 397
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+ GH+ V V P + SA D V+LW+ + GK + GH G+V F
Sbjct: 398 VARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA 457
Query: 233 NKDLVLSASGDKSVHIW 249
+ L++S+S D ++ +W
Sbjct: 458 DSRLLVSSSKDTTLKVW 474
Score = 114 (45.2 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
S +GH + + + P + S S D T R+W TG + GH+ V +V + PN
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPN 202
Query: 234 KDLVLSASGDKSVHIWQA 251
++ + S D +V IW A
Sbjct: 203 GAMIATGSMDNTVRIWDA 220
Score = 109 (43.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
G P L SAS D TVR+W + + + SGH GSV VR+ + ++S D+++ +W
Sbjct: 251 GHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRW-GGTGKIYTSSHDRTIKVWN 309
Query: 251 A 251
+
Sbjct: 310 S 310
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-LQYSGHSGSVNSVRFL 231
+ + GH V V+ P ++ + S D TVR+W + G+ + GH + S+ +
Sbjct: 184 LHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWE 243
Query: 232 P------NKDLVLSASGDKSVHIWQAV 252
P + SAS D +V IW +
Sbjct: 244 PYHLQQSGHPRLASASKDSTVRIWDVI 270
Score = 74 (31.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGGP 347
L GH V W G+ + T+S DR +++ +TGT++Q+L+ + A T
Sbjct: 278 LSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFI 336
Query: 348 IRAS 351
+R +
Sbjct: 337 LRTA 340
Score = 54 (24.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
+ L GH V + +D ++++S D +++V TG + + L PG
Sbjct: 440 ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDL--PG 487
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 47/188 (25%), Positives = 81/188 (43%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
++R++ GHR GV+ VA+ P VL S D VR+W +T + + GH G++ S++
Sbjct: 283 QVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQ 342
Query: 232 PNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITL---------R 282
V+S S D +V +W E S +
Sbjct: 343 NADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIKQWK 402
Query: 283 TP----VKELLGHSNVVIAADWLSDGEQVITASWDRVA-NLFDVETGTILQ---SLTEPG 334
P +K L GH++++ A +D V+ + D + + +D +TG Q S+ +PG
Sbjct: 403 CPDGSFIKNLSGHNSIINAMALNADN--VLVSGGDNGSISFWDWKTGYCFQKTQSIVQPG 460
Query: 335 EAIRAAAG 342
++ AG
Sbjct: 461 -SLEGEAG 467
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00056
Identities = 37/181 (20%), Positives = 69/181 (38%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R SGH V +AV + S D T+++W +G+ + +GH ++ +
Sbjct: 200 MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSS 259
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITL-- 281
+ S D V W N + P ++ + +
Sbjct: 260 RHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWD 319
Query: 282 ---RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
R + E+ GH +++ + QVI+ S D L+D+ TGT +LT + +R
Sbjct: 320 MRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVR 379
Query: 339 A 339
+
Sbjct: 380 S 380
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+ L+
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 238 LSASGDKSVHIW 249
S S D+++ W
Sbjct: 62 ASGSSDRTIRFW 73
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 141 (54.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 170 CYKIRSFSGHRDGVWDVAVR----PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 225
C K+ F GH+ +R PG + S SADR V +W T + + + GH+GSV
Sbjct: 262 CVKV--FQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSV 319
Query: 226 NSVRFLPNKDLVLSASGDKSVHI 248
N+V F P + L+LS S DK++++
Sbjct: 320 NAVDFSPKEPLILSGSSDKTLYL 342
Score = 124 (48.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 37/166 (22%), Positives = 65/166 (39%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
C + + SGH V + P + + S D+T+ W TG+ ++ GH VNSV+
Sbjct: 88 CENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQ 147
Query: 230 -FLPNKDLVLSASGDKSVHIWQA-------------VINWECLVXXXXXXXXXXXXKEPD 275
+ L+ S S D+++ IW A + C E
Sbjct: 148 GSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVK 207
Query: 276 ESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
I + + L GHS+ + +G+ ++T + D ++DV
Sbjct: 208 IWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 194 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW--- 249
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 250 ------QAV---INWE-CLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIA 297
Q + + W C E ++R T +++L GH + V++
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 298 ADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
D+ D ++TAS+D ++D TG L+ L
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWDPYTGERLRLL 279
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 175 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 232
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 233 NKDLVLSASGDKSVHIW 249
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 49/175 (28%), Positives = 70/175 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD-ESSITLRTP--VK---- 286
L+ S S DK+V IW + E V D +S +T VK
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 287 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 48/186 (25%), Positives = 71/186 (38%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDES--SIT 280
++AS DK+V +W INW C + T
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
R V H V D+ G + A D ++DV T +LQ A+ A
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 341 AGRTGG 346
+ G
Sbjct: 236 SFHPSG 241
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 51/171 (29%), Positives = 73/171 (42%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ + +AS D+TV++WST K + S H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSFV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSIT---LRTPVK-------ELLGH----SNVV 295
EC+ P + I + VK LL H S V
Sbjct: 174 KTSR-ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
A + G ++TAS D + D+ G +L +L G A A RTG
Sbjct: 233 NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 283
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 235 DLVLSASGDKSVHIW 249
+ +A D +V +W
Sbjct: 200 TCIAAAGMDNTVKVW 214
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 47/175 (26%), Positives = 68/175 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD + V + L S S D +++WS + GH +V V+F P+
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPS 73
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVK------- 286
LV S S DK+V +W + E V D S+ + K
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV 133
Query: 287 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
L H N V A + DG + +AS D+ L+D + + S E G
Sbjct: 134 HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHG 188
Score = 130 (50.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 55/186 (29%), Positives = 77/186 (41%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
F H V V L +AS D+T+++W+ K + S H V RF P+
Sbjct: 100 FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR 159
Query: 236 LVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXK-EPDESSI----TLRTP------ 284
L+ SAS DK+V +W EC+ + P + I T +T
Sbjct: 160 LIASASDDKTVKLWDKTSR-ECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 285 VKELLGHSNVVIAA-DWLS---DGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRA 339
+ LL H V AA + LS G +ITAS D + D+ G +L +L G A
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Query: 340 AAGRTG 345
A RTG
Sbjct: 279 AFSRTG 284
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +C+ + H G N V F P+
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 235 DLVLSASGDKSVHIWQAVIN 254
+ +A DK+V +W +N
Sbjct: 201 TCIAAAGTDKTVKVWDVRMN 220
Score = 112 (44.5 bits), Expect = 0.00094, P = 0.00094
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 223
KTS C I SF H V P + +A D+TV++W + + + Y H+
Sbjct: 175 KTSR-EC--IHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTA 231
Query: 224 SVNSVRFLPNKDLVLSASGDKSVHI 248
+VNS+ F P+ + +++AS D ++ I
Sbjct: 232 AVNSLSFHPSGNYLITASNDSTLKI 256
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 141 (54.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 47/175 (26%), Positives = 71/175 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXX---------KEPDESSITLRTP 284
L+ S S DK+V IW I E V D+ +I + +
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 285 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
++ L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 164 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Score = 141 (54.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 48/186 (25%), Positives = 71/186 (38%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV-FRAHTATVRSVHFCSDG 146
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDES--SIT 280
++AS DK++ +W INW C + T
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAA 340
R V H V D+ G V A D ++DV T +LQ A+ A
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Query: 341 AGRTGG 346
+ G
Sbjct: 267 SFHPSG 272
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 49/171 (28%), Positives = 73/171 (42%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ + +AS D+T+++WST K + S H V +F P+ L++SAS DK+V +W
Sbjct: 146 GQSFV-TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSIT---LRTPVK-------ELLGH----SNVV 295
EC+ P + + + VK LL H S V
Sbjct: 205 KTSR-ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 263
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
A + G ++TAS D + D+ G +L +L G A A RTG
Sbjct: 264 NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 314
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 235 DLVLSASGDKSVHIW 249
V +A D +V +W
Sbjct: 231 TCVAAAGMDNTVKVW 245
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 147 (56.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 33/75 (44%), Positives = 41/75 (54%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GHRD V V +L SAS DRTVR+W T+ G GHS V SV F +
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS 517
Query: 235 DLVLSASGDKSVHIW 249
L+ SAS D++V IW
Sbjct: 518 RLLASASNDQTVRIW 532
Score = 137 (53.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 49/181 (27%), Positives = 79/181 (43%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++ GH V V+ +L SAS DRTV++W T+TG GHS V SV F
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 233 NKDLVLSASGDKSVHIW-------QAVI----NWECLVXXXXXXXXXXXXKEPDESSI-- 279
+ L+ SAS D +V IW Q + +W V + I
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 280 TLRTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
T ++ L GH + V + + D + + +AS D ++D TG++ +L + +R
Sbjct: 408 TGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVR 467
Query: 339 A 339
+
Sbjct: 468 S 468
Score = 134 (52.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 31/75 (41%), Positives = 39/75 (52%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GHRD V V +L SAS D TV++W T TG GH V SV F +
Sbjct: 416 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 475
Query: 235 DLVLSASGDKSVHIW 249
L+ SAS D++V IW
Sbjct: 476 RLLASASDDRTVRIW 490
Score = 38 (18.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 46 DQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQ 79
D DL + +L +E D + PS V SLFS+
Sbjct: 76 DVDLPT-KDYLINEARDEIYPSGVTGAHLSLFSR 108
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 121 (47.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 188 VRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 246
V+PG +P L S+S D T+++W T + C SGH+ SV+ V++ + L+ S S D++V
Sbjct: 243 VKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW-GGQGLLYSGSHDRTV 301
Query: 247 HIWQAVINWECL 258
+W C+
Sbjct: 302 RVWDINSQGRCI 313
Score = 115 (45.5 bits), Expect = 0.00094, P = 0.00094
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 132 NKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYK-IRSFSGHRDGVWDVAVRP 190
N +K+ N +++++ T S + F + L K I +GH+ V VA P
Sbjct: 359 NYEKICKKNGNSEEMMVT------ASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP 412
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ SAS D +++LW + GK + + GH SV V + + L++S S D ++ +W
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Score = 103 (41.3 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFL 231
+ + GH + V V+ P V+ + S D T+RLW ++G+C+ GHS + S+ +
Sbjct: 179 MHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWE 238
Query: 232 P-------NKDLVLSASGDKSVHIWQAV 252
P +K + S+S D ++ IW V
Sbjct: 239 PIHLVKPGSKPRLASSSKDGTIKIWDTV 266
Score = 65 (27.9 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 329
P+ + GH +V + DG +++AS+D L+D G + +
Sbjct: 394 PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFIST 439
Score = 51 (23.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
GH V W SD +++ S D ++DV T + S+ PG
Sbjct: 442 GHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL--SVDLPG 484
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 137 (53.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+RSF GH V D + SAS D+T+RLW TG+ ++ GH V SV
Sbjct: 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+++S S DK++ +W I +CL
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQCL 141
Score = 40 (19.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 287 ELLGHSNVV----IAADWLSDGEQVITASWDRVANLFDVET 323
E G+S ++ W +DG+ + D V ++ V T
Sbjct: 277 EFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 121 (47.7 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 173 IRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
I++F GH V+ + V G + SA AD+ +W ++G+CV + GH +N+VR
Sbjct: 191 IQNFHGHTGDVFAIDVPKCDTGNTFI-SAGADKHSLVWDIRSGQCVQSFEGHEADINTVR 249
Query: 230 FLPNKDLVLSASGDKSVHIW 249
F PN D + S D + ++
Sbjct: 250 FHPNGDAFATGSDDATCRLF 269
Score = 52 (23.4 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWD 313
L GH N + DG V +ASWD
Sbjct: 324 LYGHENRISCLRTSPDGTAVCSASWD 349
Score = 42 (19.8 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 13/58 (22%), Positives = 23/58 (39%)
Query: 5 DPLKNFLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDD 62
D ++ L D+ + D M K +R G + + D S+ + H+ S D
Sbjct: 32 DQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDWSLDKRHIVSSSQD 89
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 49/175 (28%), Positives = 70/175 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD-ESSITLRTP--VK---- 286
L+ S S DK+V IW + E V D +S +T VK
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 287 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
L H N V A + DG +++AS D+ L+D + + S E G
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG 187
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/171 (26%), Positives = 69/171 (40%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDESSITL- 281
++AS DK+V +W INW C D+ ++ L
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS---DDKTVKLW 172
Query: 282 ----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
R V H V D+ G + A D ++DV T +LQ
Sbjct: 173 DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/171 (30%), Positives = 75/171 (43%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ + +AS D+TV++W+T K + S H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSIT---LRTPVK-------ELLGHSNVVIAA- 298
EC+ P + I + VK LL H + AA
Sbjct: 174 KSSR-ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 299 DWLS---DGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
+ LS G +ITAS D + D+ G +L +L G A A RTG
Sbjct: 233 NGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 283
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 235 DLVLSASGDKSVHIW 249
+ +A D +V +W
Sbjct: 200 TCIAAAGMDNTVKVW 214
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 145 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 202
K +L V S K V + S C + S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKSSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
TV++W +T + + Y HS +VN + F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 144 (55.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 148 TTNKLKVQTSKIVSSFKTSLLSCYK-IRSFSGHRDGVWD-VAVRPGQPVLGSASADR-TV 204
TT + TS + + + L Y+ R+F+ R + VAV ++ + + D V
Sbjct: 422 TTTGYVIVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEV 481
Query: 205 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXX 264
+WS QTG+ + SGH G ++ + F P K ++ SAS D++VH+W +W
Sbjct: 482 FIWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVHLWDMADSWRTTETLALT 541
Query: 265 XXXXXXXKEPDESSITLRT 283
PD + + + T
Sbjct: 542 SDALAVTFRPDGAELAVAT 560
Score = 46 (21.3 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 10 FLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGD 46
F + H +P+ + + S +R AS +++ GD
Sbjct: 305 FASGIFHLHELPEFNLIHSLSISDQRVASVAINSSGD 341
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 144 (55.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I + H V + P L SA+ D TV+LW GK + +++GHSG VN V F P
Sbjct: 140 IFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP 199
Query: 233 NKDLVLSASGDKSVHIW 249
++ L+ S S D+++ W
Sbjct: 200 SEYLLASGSSDRTIRFW 216
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH+ + + P + S S D ++LW + C+ +Y H+ +V +RF P
Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP 157
Query: 233 NKDLVLSASGDKSVHIW 249
+ + SA+ D +V +W
Sbjct: 158 DGKWLASAADDHTVKLW 174
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+ + +GH D + D ++ +ASAD T R+++ T KC+ + GH G ++ + F P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 233 NKDLVLSASGDKSVHIWQAVINWECL 258
+ +L+ S DK+ IW V +CL
Sbjct: 356 QGNRLLTGSSDKTARIWD-VQTGQCL 380
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 172 KIRSFSGHRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
++ + GHR+ V+ +A P + + S D+T +LWS +TGKC + GH+ + + F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSF 185
Query: 231 LPNKDLVLSASGDKSVHIW-----QAVINW-----ECLVXXXXXXXXXXXXKEPDESSI- 279
P +V + S D + +W + V+ E + D + +
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV 245
Query: 280 ---TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+ V L+GH + +A + D ++T S D+ L+D +G + +LT
Sbjct: 246 WDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 198
+NP K+ T + K T K+ S+ +T CY +F GH + ++ P V+ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWSA-ETG--KCY--HTFRGHTAEIVCLSFNPQSTVVATG 195
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251
S D T +LW Q+G+ V+ +GH + S+ F + D +++ S D +V +W A
Sbjct: 196 SMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I GH + ++ P L + S+D+T R+W QTG+C+ GH+ + S F
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 233 NKDLVLSASGDKSVHIWQ 250
++V++ S D S IW+
Sbjct: 398 KGNIVITGSKDNSCRIWR 415
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 144 (55.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y + + GH D V ++ G +L S S D ++R+W TG+C+ GHS + SV +
Sbjct: 498 YFVHTLIGHTDSVRTISGY-GD-ILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLY 555
Query: 231 LPNKDLVLSASGDKSVHIWQA-------VINWECLVXXXXXXXXXXXXKEPDESSIT--- 280
P +++ +S S DKS+ +W V+ +S+I
Sbjct: 556 EPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWD 615
Query: 281 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
L T ++ SN + ++SD ++I+ + D L+DV TG +L+ L
Sbjct: 616 LNTGKPLMVLPSNSGYISSFVSDEHKIISGN-DGSVKLWDVRTGKLLRFL 664
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 43/175 (24%), Positives = 75/175 (42%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL------ 231
GH++GVW AV+ + L S S D+TVR+W+ + KC + GH + + L
Sbjct: 389 GHKEGVW--AVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLI 446
Query: 232 --------PNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRT 283
P++ ++S S D ++ +W+ N + K P
Sbjct: 447 RHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYF------- 499
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
V L+GH++ V G+ +++ S+D ++ V TG L L G ++R
Sbjct: 500 -VHTLIGHTDSVRTISGY--GDILVSGSYDSSIRIWRVSTGECLYHLR--GHSLR 549
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 147 (56.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 140 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS 199
+PS KL T++ T K+ K C I +F GH VW + S+S
Sbjct: 403 HPSGDKLATSSG--DTTVKLWDLCKGD---C--ILTFEGHSRAVWSCTWHSCGNFVASSS 455
Query: 200 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 251
D+T ++W + +C GH+ SVNS+ F P + +L++S DK++ IW A
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDA 507
Score = 126 (49.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 167 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
L C + + GH D + D P L ++S D TV+LW G C+L + GHS +V
Sbjct: 381 LPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVW 440
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
S + + V S+S DK+ IW
Sbjct: 441 SCTWHSCGNFVASSSLDKTSKIW 463
Score = 38 (18.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWD 313
+ +L+GH N + DGE + + D
Sbjct: 596 IHKLMGHENEAHTVVFSHDGEILFSGGSD 624
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 178
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 236
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208
Query: 237 VLSASGDKSVHIWQ 250
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 170 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 227
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 228 VRFLPNKDLVLSASGDKSVHIWQA--VINWECL 258
V + P+ +L+ + S DKSV +W+ +EC+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 38/150 (25%), Positives = 66/150 (44%)
Query: 117 ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSF 176
E ++ ECV+ +N + K + +PS + L + + T K+ + + C +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEEDDWVCC---ATL 190
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW---------------STQTGKCVLQYSG- 220
GH VW +A P L S S DRTVR+W S + KC+ SG
Sbjct: 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250
Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
HS ++ + + + +A GD ++ ++Q
Sbjct: 251 HSRTIYDIAWCQLTGALATACGDDAIRVFQ 280
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 178
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 236
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208
Query: 237 VLSASGDKSVHIWQ 250
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKD 235
GH+ V VA P L SAS D T +W +CV GH V SV + P+ +
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGN 118
Query: 236 LVLSASGDKSVHIWQA--VINWECL 258
L+ + S DKSV +W+ +EC+
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECV 143
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 117 ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSF 176
E ++ ECV+ +N + K + +PS + L + + T K+ + + C +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEEDDWVCC---ATL 190
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW---------------STQTGKCVLQYSG- 220
GH VW +A P L S S DRTVR+W S + KCV SG
Sbjct: 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGF 250
Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
HS ++ V + + +A GD ++ +++
Sbjct: 251 HSRTIYDVAWCQLTGTLATACGDDAIRVFE 280
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 142 (55.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/169 (23%), Positives = 74/169 (43%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH GV V P ++ S AD V++W+ TGK + + GH ++++ + P+ +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 238 LSASGDKSVHIWQAVI------------NWECLVXXXXXXXXXXXXKEPDESSIT--LRT 283
S S DK++ +W + N+ + DE+ +R+
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSY-DEAVFLWDVRS 292
Query: 284 P--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+K L HS+ V D + DG + + + D + ++D TG L++L
Sbjct: 293 ARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL 341
Score = 133 (51.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFL 231
I +F GH G+ ++ P + S S D+T+RLW+ TGK + GH V ++ F
Sbjct: 211 IYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFS 270
Query: 232 PNKDLVLSASGDKSVHIW 249
P ++++S S D++V +W
Sbjct: 271 PKGNMLVSGSYDEAVFLW 288
Score = 133 (51.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 51/228 (22%), Positives = 92/228 (40%)
Query: 36 TASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQ 95
T+S +L+ D D R LN+ P S F + ++ + +
Sbjct: 23 TSSDELAAGSDHDQERRRVSLNAYPPKRPYPRSRSFSSSESPDELAMDADVYWRSRNRGR 82
Query: 96 DKIDMLMEKLDRESIINEKYPECNDMECVT--NMNKNFNKQKVLASNP-SAQKLKTTNKL 152
D D + D E+ NE E N+ E NMN + N ++ S ++ T +
Sbjct: 83 D--DSPWARSDEENDENEADEEENENEDDEHDNMNGDDNGREANGSRERDLDEMDTVGEN 140
Query: 153 KVQTSKIVSSF--------KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTV 204
+ +T S K ++ + GH GV V P ++ S AD V
Sbjct: 141 EPETDPDRSPTPVPPPPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAV 200
Query: 205 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
++W+ TGK + + GH ++++ + P+ + S S DK++ +W +
Sbjct: 201 KVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVL 248
>UNIPROTKB|Q9NSS8 [details] [associations]
symbol:DKFZp434D199 "Putative uncharacterized protein
DKFZp434D199" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471059
EMBL:AL451070 EMBL:AC114495 UniGene:Hs.33962 HGNC:HGNC:30857
ChiTaRS:SNRNP40 EMBL:AL157420 IPI:IPI00385642 PIR:T46935 SMR:Q9NSS8
STRING:Q9NSS8 Ensembl:ENST00000373720 Uniprot:Q9NSS8
Length = 127
Score = 119 (46.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 190 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
P + + SADR V +W T + + + + GH+GS+N V F P++ +++SAS DK +++
Sbjct: 65 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYM 123
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH GV V++ P ++ +A D ++LW +T V+ GH G +N V+ P
Sbjct: 217 IRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTP 276
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI 279
V+S+S D +V +W V V P E S+
Sbjct: 277 VDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSV 323
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 168 LSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
L+ K+++ +GH V DVAV P L S S D+TV+ W + + + Y GH V
Sbjct: 169 LATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVR 228
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+V P DL+ +A D + +W
Sbjct: 229 TVSIHPTLDLIATAGRDSVIKLW 251
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 48/183 (26%), Positives = 69/183 (37%)
Query: 174 RSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
R +GH V VA+ P + S D T+++W TGK +GH +V V
Sbjct: 133 RVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSD 192
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITL-- 281
+ S S DK+V W N P +S I L
Sbjct: 193 RHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWD 252
Query: 282 ---RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
R PV L+GH + QV+++S D L+DV G ++ LT ++R
Sbjct: 253 MRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVR 312
Query: 339 AAA 341
A A
Sbjct: 313 ATA 315
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 125 (49.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--C-VLQYSGHSGSVNSVRFLPN 233
+GH D VW VA P VL S D+T+R+W + K C + GH ++ S+ + P
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPC 61
Query: 234 KDLVLSASGDKSVHIW-QAVINWEC 257
+ SAS D + IW Q +EC
Sbjct: 62 GTFLASASFDATTCIWDQKSGEFEC 86
Score = 53 (23.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
L GH N V + DW G + T D+ +++V+
Sbjct: 90 LEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQ 124
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
L GH + V + + G+++++ S D+ ++
Sbjct: 179 LEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 325
H + W + TAS D +F +T +
Sbjct: 240 HDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNS 274
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/180 (25%), Positives = 71/180 (39%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R SGH V +AV PG + + DR +++W +GK L +GH +V V
Sbjct: 166 RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTK 225
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD---------ESSITL--- 281
+ S D+ V W N P +S+ +
Sbjct: 226 HPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDM 285
Query: 282 RTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
RT V L GH+N V + + Q+IT S D L+D+ G + +LT +++R+
Sbjct: 286 RTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRS 345
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IR + GH V+ +A+ P VL ++ D T R+W +T V +GH+ +V SV
Sbjct: 249 IRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQA 308
Query: 233 NKDLVLSASGDKSVHIW 249
+++ S D +V +W
Sbjct: 309 TNPQIITGSHDSTVRLW 325
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 168 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
L+ K++ S +GH V VAV P L S DR V+ W + K + Y GH +V
Sbjct: 201 LASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVY 260
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
S+ P D++ ++ D + IW
Sbjct: 261 SLALHPTIDVLATSGRDSTARIW 283
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 31/75 (41%), Positives = 39/75 (52%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+++GH D V VAV P S S DR+++ W QTG+ L GH SV SV F P+
Sbjct: 533 TYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 235 DLVLSASGDKSVHIW 249
S SGD IW
Sbjct: 593 RQFASGSGDLRARIW 607
Score = 132 (51.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 168 LSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
LS K+R FSGH ++ + + S S DRT RLW +TG+C+L+ +G V
Sbjct: 389 LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VT 447
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
++ PN + S D+ + +W
Sbjct: 448 AIAISPNDQFIAVGSLDQIIRVW 470
Score = 128 (50.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA 240
+GV +A+ P + S D+ +R+WS +G V + GH SV S+ F P+ ++LS
Sbjct: 444 NGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 241 SGDKSVHIWQ 250
S DK++ +W+
Sbjct: 503 SLDKTIKVWE 512
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 40/174 (22%), Positives = 75/174 (43%)
Query: 186 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 245
+A P L + + DR ++LW T K +SGH + S+ F N ++S SGD++
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 246 VHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT-------LR------TPVKELLGHS 292
+W V +C++ P++ I +R T V+ L GH
Sbjct: 426 ARLWD-VETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHK 484
Query: 293 NVVIAADWLSDGEQVITASWDRVANLFDVE-TGTILQSLTEPGEAIRAA-AGRT 344
V + + D +++ S D+ +++++ T ++ S +P +A G T
Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Score = 117 (46.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------GKCVLQYSG 220
+ GH++ V+ +A P +L S S D+T+++W Q G C Y+G
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 221 HSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
H+ V SV P+ LS S D+S+ W
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFW 565
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
GH N VI+ + DG Q + S D A ++ ++
Sbjct: 578 GHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
>DICTYBASE|DDB_G0267382 [details] [associations]
symbol:corA "coronin" species:44689 "Dictyostelium
discoideum" [GO:0001891 "phagocytic cup" evidence=IBA;IDA]
[GO:0006909 "phagocytosis" evidence=IEP] [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0031982 "vesicle" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0009617
"response to bacterium" evidence=IEP] [GO:0006972 "hyperosmotic
response" evidence=IEP] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0051126 "negative regulation of actin nucleation"
evidence=ISS] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0006897 "endocytosis" evidence=TAS] [GO:0051707
"response to other organism" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0042995 "cell projection" evidence=IDA]
[GO:0051286 "cell tip" evidence=IDA] [GO:0043327 "chemotaxis to
cAMP" evidence=IMP] [GO:0006928 "cellular component movement"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0030864 "cortical actin
cytoskeleton" evidence=IBA] [GO:0030835 "negative regulation of
actin filament depolymerization" evidence=IBA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0060187 "cell pole" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267382 GO:GO:0009986
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0009617 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006909 GO:GO:0051015
EMBL:AAFI02000003 GO:GO:0006928 GO:GO:0006972 GO:GO:0000910
GO:GO:0042995 GO:GO:0001891 GO:GO:0030864 GO:GO:0051126
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:X61480 PIR:S18663 RefSeq:XP_647343.1 ProteinModelPortal:P27133
STRING:P27133 EnsemblProtists:DDB0191115 GeneID:8616153
KEGG:ddi:DDB_G0267382 OMA:PVLDIKW ProtClustDB:CLSZ2431531
Uniprot:P27133
Length = 445
Score = 100 (40.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 176 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCV------LQ-YSGHSGSVNS 227
F+GH+ V D+A P + ++GS S D + +W G LQ SGH V +
Sbjct: 75 FNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGT 134
Query: 228 VRFLPNKDLV-LSASGDKSVHIW 249
+ F P D V +++SGD V W
Sbjct: 135 ISFNPVADNVAVTSSGDFLVKTW 157
Score = 84 (34.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
GHS+++ + +W +G Q++T D+ A +FD T +I+ +
Sbjct: 170 GHSDMITSCEWNHNGSQIVTTCKDKKARVFDPRTNSIVNEV 210
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 147 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR 205
KTT V T ++V+ + K + + D + V P +L + + D+ +R
Sbjct: 221 KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIR 280
Query: 206 LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXX 265
+W T + + GH + S+ F P+ D ++S SGD+SV IW + +C +
Sbjct: 281 IWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTS-QCSLTLSIED 339
Query: 266 XXXXXXKEPD 275
PD
Sbjct: 340 GVTTVAVSPD 349
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW-----STQTGKCVLQYSGHSGSVNSVRFL 231
+GH D V+ VA + S S DRTV+LW S + C + Y GH V SV
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT 443
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ + +LS S D+ V W
Sbjct: 444 PDNEYILSGSKDRGVIFW 461
Score = 122 (48.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN 233
DGV VAV P ++ + S DRTVR+W + TG V + +GH SV SV F N
Sbjct: 339 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 234 KDLVLSASGDKSVHIW 249
+ + S S D++V +W
Sbjct: 399 GEQIASGSLDRTVKLW 414
Score = 116 (45.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I+ GH ++ + P L S S DR+VR+W +T +C L S G V +V P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 233 NKDLVLSASGDKSVHIWQA 251
+ L+ + S D++V +W +
Sbjct: 349 DGKLIAAGSLDRTVRVWDS 367
Score = 58 (25.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
GH + V + + ++GEQ+ + S DR L+ +E
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 51 (23.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+GH + V++ D E +++ S DR +D +G L L
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 147 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR 205
KTT V T ++V+ + K + + D + V P +L + + D+ +R
Sbjct: 221 KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIR 280
Query: 206 LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXX 265
+W T + + GH + S+ F P+ D ++S SGD+SV IW + +C +
Sbjct: 281 IWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTS-QCSLTLSIED 339
Query: 266 XXXXXXKEPD 275
PD
Sbjct: 340 GVTTVAVSPD 349
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW-----STQTGKCVLQYSGHSGSVNSVRFL 231
+GH D V+ VA + S S DRTV+LW S + C + Y GH V SV
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT 443
Query: 232 PNKDLVLSASGDKSVHIW 249
P+ + +LS S D+ V W
Sbjct: 444 PDNEYILSGSKDRGVIFW 461
Score = 122 (48.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN 233
DGV VAV P ++ + S DRTVR+W + TG V + +GH SV SV F N
Sbjct: 339 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 234 KDLVLSASGDKSVHIW 249
+ + S S D++V +W
Sbjct: 399 GEQIASGSLDRTVKLW 414
Score = 116 (45.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I+ GH ++ + P L S S DR+VR+W +T +C L S G V +V P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 233 NKDLVLSASGDKSVHIWQA 251
+ L+ + S D++V +W +
Sbjct: 349 DGKLIAAGSLDRTVRVWDS 367
Score = 58 (25.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
GH + V + + ++GEQ+ + S DR L+ +E
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 51 (23.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+GH + V++ D E +++ S DR +D +G L L
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH D V DV ++ +ASAD T R++ST T +C+ Q GH G ++ V F V
Sbjct: 301 GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV 360
Query: 238 LSASGDKSVHIWQAVINWECL 258
L+AS DK+ +W V CL
Sbjct: 361 LTASVDKTSRVW-CVKTGACL 380
Score = 134 (52.2 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 172 KIRSFSGHRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
++ + GHR+ V+ +A P + + S D+T +LWS +TGKC + GH+ + + F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF 185
Query: 231 LPNKDLVLSASGDKSVHIW 249
P LV + S D + +W
Sbjct: 186 NPQSTLVATGSMDTTAKLW 204
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 156 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKC 214
TS++ F T C + GH+ + V G VL +AS D+T R+W +TG C
Sbjct: 326 TSRV---FSTDTFQC--LCQLEGHKGEISKVCFNAQGSRVL-TASVDKTSRVWCVKTGAC 379
Query: 215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ GHS + S F D +++ S D + IW
Sbjct: 380 LQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 54/230 (23%), Positives = 94/230 (40%)
Query: 139 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 198
+NP K+ T + K T K+ S+ +T C+ +F GH + +A P ++ +
Sbjct: 143 NNPYGDKVATGSFDK--TCKLWSA-ETG--KCFY--TFRGHTAEIVCLAFNPQSTLVATG 195
Query: 199 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA------- 251
S D T +LW ++G+ V +GH + S+ F D +++ S D + +W
Sbjct: 196 SMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH 255
Query: 252 VI------------NWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIAAD 299
V+ NW+C + + E L T LLGH++ V+
Sbjct: 256 VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA-EGGQCLAT----LLGHNDEVLDVC 310
Query: 300 WLSDGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTGGPI 348
+ G+ + TAS D + +F +T L L GE + G +
Sbjct: 311 FNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV 360
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I+++ H V DV V S DR V W TG+ + ++ GH G VN+V+F
Sbjct: 53 IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFND 112
Query: 233 NKDLVLSASGDKSVHIW 249
+ +V+SA D+S+ +W
Sbjct: 113 SSSVVVSAGFDRSLRVW 129
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 162 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH 221
+++TS C I GH D V + + +L S SAD TV+LW GK + GH
Sbjct: 339 NYRTS--ECISI--LHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGKRIT-LRGH 391
Query: 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
+G VNSVR + ++ LVLS S D ++ IW N CL
Sbjct: 392 TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN-TCL 427
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
Q L SAS D TV+LW + GK + ++GH V S+ F PN + + S S DKS+HIW
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIW 568
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/147 (28%), Positives = 67/147 (45%)
Query: 195 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 247
L SA D VR+W + G K ++++ + H+ +VN VRF PN +++ S D +
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 248 IWQAVINWECLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGE 305
+W+ N E ++ DE+ + T VK L GH V W +DG
Sbjct: 92 LWKVNDNKE---------PEQVAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGN 142
Query: 306 QVITASWDRVANLFDVETGTILQSLTE 332
+ +AS D A ++DV G + E
Sbjct: 143 LMASASVDNTAIMWDVSKGQKISIFNE 169
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 171 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
YK+ + GH + P LG++SAD+TV++W+ C +GH VN +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT--------- 280
+ + V+SAS DK++ I++ V + P S +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 281 ---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
++T +K L HS+ V A + DG + + S+D + ++D G +++L +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Score = 129 (50.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 40/162 (24%), Positives = 72/162 (44%)
Query: 108 ESIINEKYPECNDMECVTNMNKN---FNKQKVLASNP-SAQKLKTTNKLKVQTSK-IVSS 162
+SI + K+ C ++ +K +N ++ + KL + S+ +VS+
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 163 FKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 216
L ++I ++ GH + V+ P ++ S S D +VR+W +TG C+
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 217 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
HS V++V F + L+ S S D V IW N +C+
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-NGQCI 248
Score = 45 (20.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N +A + +G+ ++ ++ D L+D G L+ T
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 171 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
YK+ + GH + P LG++SAD+TV++W+ C +GH VN +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT--------- 280
+ + V+SAS DK++ I++ V + P S +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 281 ---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTE 332
++T +K L HS+ V A + DG + + S+D + ++D G +++L +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD 253
Score = 129 (50.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 40/162 (24%), Positives = 72/162 (44%)
Query: 108 ESIINEKYPECNDMECVTNMNKN---FNKQKVLASNP-SAQKLKTTNKLKVQTSK-IVSS 162
+SI + K+ C ++ +K +N ++ + KL + S+ +VS+
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 163 FKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 216
L ++I ++ GH + V+ P ++ S S D +VR+W +TG C+
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 217 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 258
HS V++V F + L+ S S D V IW N +C+
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-NGQCI 248
Score = 45 (20.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 285 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
+K L+ N +A + +G+ ++ ++ D L+D G L+ T
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 146 (56.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 47/176 (26%), Positives = 73/176 (41%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
++ GH V+ + P L S S D+TVRLWS T ++ Y GH+ V V F P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD-------ESSITLRT--- 283
+AS D++ +W + + P+ S T R
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 284 ----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335
V+ LGH+ VI+ DG + T S D + N++D+ TG L+ + G+
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Score = 139 (54.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/176 (26%), Positives = 72/176 (40%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S+ GH VWDV+ P +AS D+T RLWS + ++GH V+ V F PN
Sbjct: 562 SYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNG 621
Query: 235 DLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD--------ESSIT----LR 282
V + S DK+ +W + PD E I +
Sbjct: 622 CYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIG 681
Query: 283 TP--VKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGE 335
T +K++ GH N + + + +G +I+ D ++D++ T S EP E
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPS-AEPDE 736
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 19 NMPQSDTMSQKSTKHKRTASGKLSNLGDQ 47
N Q+ T + K++RT + +N G Q
Sbjct: 8 NQNQNGTHQPQPVKNQRTNNAAGANSGQQ 36
>ASPGD|ASPL0000034848 [details] [associations]
symbol:AN2861 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 SUPFAM:SSF81383 EMBL:AACD01000051 KO:K03362
RefSeq:XP_660465.1 ProteinModelPortal:Q5B9B9
EnsemblFungi:CADANIAT00010229 GeneID:2874563 KEGG:ani:AN2861.2
HOGENOM:HOG000198049 OMA:YHSASIL OrthoDB:EOG4X6GHM Uniprot:Q5B9B9
Length = 656
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 171 YK-IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
YK IR GH GV DV + S S D T+ +W ++G V + GH G VN+V+
Sbjct: 442 YKPIRRLEGHTAGVLDVCF--DHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGPVNAVQ 499
Query: 230 FLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITL-------- 281
DL++SASGD +W + + C+ + +++ L
Sbjct: 500 L--RGDLIVSASGDGVAKLWN-ITSGLCVKEFSSRDRGLACVEFSNDARTVLTGGNDRAI 556
Query: 282 -----RTP--VKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQSLTEP 333
T VKE+ GH+ +V + L D +++++ S+D +FD + G + S+ P
Sbjct: 557 YQFDANTGQLVKEIEGHTGLVRSLH-LDDVNQRIVSGSYDTSVKVFDAQAGEL--SIDFP 613
Query: 334 G 334
G
Sbjct: 614 G 614
>UNIPROTKB|F1NGY5 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AADN02062576 IPI:IPI00577520
ProteinModelPortal:F1NGY5 Ensembl:ENSGALT00000002747 Uniprot:F1NGY5
Length = 805
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH +W V + P Q ++ + SAD+T++LW + G+C Y+GH V + L
Sbjct: 157 TLQGHTAAIWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTYAGHEDCVRGLAILSEM 214
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
+ LS S D SV W I+ ECL
Sbjct: 215 EF-LSCSNDASVRRWH--ISGECL 235
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 122 (48.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 168 LSCYKIRSFSGHRDGVWDVAVRP------G-QPVLGSASADRTVRLWSTQ------TGKC 214
L +I+ GH D VW VA P G P+L S S D TVR+W T K
Sbjct: 8 LELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKT 67
Query: 215 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-INWECL 258
VL+ + H+ +V S + P+ L+ +AS D + IW+ +EC+
Sbjct: 68 VLEET-HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECI 111
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 324
+ L GH N V + W + G + T S D+ +++V G
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEG 150
Score = 42 (19.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
GHS+ V + + + G++++T S D ++ +
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTD 243
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 46/171 (26%), Positives = 69/171 (40%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 234
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 77
Query: 235 DLVLSASGDKSVHIWQAV-----------INW-ECLVXXXXXXXXXXXXKEPDESSITL- 281
++AS DK+V +W INW C D+ ++ L
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS---DDKTVKLW 134
Query: 282 ----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
R V H V D+ G + A D ++DV T +LQ
Sbjct: 135 DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 185
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/171 (30%), Positives = 75/171 (43%)
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
GQ + +AS D+TV++W+T K + S H V +F P+ L++SAS DK+V +W
Sbjct: 77 GQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Query: 251 AVINWECLVXXXXXXXXXXXXK-EPDESSIT---LRTPVK-------ELLGHSNVVIAA- 298
EC+ P + I + VK LL H + AA
Sbjct: 136 KSSR-ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 194
Query: 299 DWLS---DGEQVITASWDRVANLFDVETGTILQSLT-EPGEAIRAAAGRTG 345
+ LS G +ITAS D + D+ G +L +L G A A RTG
Sbjct: 195 NGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 245
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 161
Query: 235 DLVLSASGDKSVHIW 249
+ +A D +V +W
Sbjct: 162 TCIAAAGMDNTVKVW 176
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 145 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 202
K +L V S K V + S C + S+ H V V P + +A D
Sbjct: 114 KFSPDGRLIVSASDDKTVKLWDKSSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171
Query: 203 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 248
TV++W +T + + Y HS +VN + F P+ + +++AS D ++ I
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/175 (24%), Positives = 72/175 (41%)
Query: 171 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 229
YK R GH + V + P + SASAD T R+W +TG + GH V+ +
Sbjct: 170 YKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLA 229
Query: 230 FLPNKDLVLSASGDKSVHIWQAV-------INWECLVXXXXXXXXXXXXKEPDESSITL- 281
+ P+ + + S DK++ +W + + + + S I +
Sbjct: 230 WSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVG 289
Query: 282 ------RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
R + LLGH N V + G + + S+D L+DV G +++SL
Sbjct: 290 GGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSL 344
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R GH + V+ +A P +L S S D V LW + G+ + HS V+ + F +
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRD 359
Query: 234 KDLVLSASGDKSVHIWQAVINWECL 258
LV+S S D + IW +CL
Sbjct: 360 GTLVVSCSTDGLIRIWDTATG-QCL 383
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 144 (55.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRF 230
KI SF H D + +AV P QP + +AS D T++LW + G KCV Y GHS V +
Sbjct: 89 KIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAI 148
Query: 231 LPNKDLVLSASG--DKSVHIW 249
P KD AS D++V IW
Sbjct: 149 NP-KDTNTFASACLDRTVKIW 168
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 331
T + + L GH++ V A + + +I+ S D ++ T + QSL+
Sbjct: 216 TTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYRLEQSLS 267
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 132 (51.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT---GKCV-LQYSGHSGSVNSVR 229
R + GH+ V VA L S S D+T R+W+ + K L+ GH+ SV+ +
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 230 FLP-NKDLVLSASGDKSVHIWQA 251
+ P + DLV +ASGDKSV +W A
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDA 96
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 304 GEQVITASWDRVANLFDVETG-TILQ 328
GE + +AS D ++ +V+TG T+ Q
Sbjct: 245 GEYIASASEDLFIDIANVQTGRTVHQ 270
Score = 37 (18.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 284 PVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAA 341
P+ L H+ IA D G S D + +L+D+ L++ T+ +R +
Sbjct: 183 PLDTLTAHTAGCYCIAID--PKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTIS 240
Query: 342 GRTGGPIRAS 351
G AS
Sbjct: 241 FNYSGEYIAS 250
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 150 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST 209
NK + S+ S+ S+ + + ++ GH VWDVA P +AS D+T +LWS
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC 450
Query: 210 QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
+ ++GH V+ V F PN VL+ S DK+ +W
Sbjct: 451 DHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 167 LLSC---YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 223
L SC Y +R F+GH V V P + + S+D+T RLW G V ++GH+
Sbjct: 447 LWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQ 506
Query: 224 SVNSVRFLPNKDLVLSASGDKSVHIW 249
V +V P+ + SA + +H+W
Sbjct: 507 PVTAVAIAPDGHTMASADSEGLIHLW 532
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
+ +R F+GH V VA+ P + SA ++ + LW TG+ + GH G++ S+ F
Sbjct: 496 HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSF 555
Query: 231 LPNKDLVLSASGDKSVHIW 249
+++S D +V W
Sbjct: 556 SRESTVLVSGGSDCTVRAW 574
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 42/172 (24%), Positives = 69/172 (40%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R S H V+ P L S S D + RLWS T ++ Y GH+G V V F P
Sbjct: 373 VRLLS-HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP 431
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI-------TLRT-- 283
+AS D++ +W + V P+ + + T R
Sbjct: 432 FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWD 491
Query: 284 -----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
V+ GH+ V A DG + +A + + +L+D+ TG ++++
Sbjct: 492 VHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTM 543
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ +GH D V V P P + SAS D+T+R+W+ Q + +GH+ V +F P +
Sbjct: 88 TLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTE 147
Query: 235 DLVLSASGDKSVHIW 249
DL+ SAS D+SV IW
Sbjct: 148 DLIASASLDQSVRIW 162
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I F H V + P QP+ S D +++W+ QT +C+ +GH V +V F P
Sbjct: 44 IDRFEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHP 103
Query: 233 NKDLVLSASGDKSVHIWQAVINWE 256
+LSAS D+++ IW NW+
Sbjct: 104 ELPWILSASDDQTIRIW----NWQ 123
Score = 119 (46.9 bits), Expect = 0.0010, P = 0.0010
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W VA P P++ SA DR ++LW K V GH + ++ F P++
Sbjct: 207 GHDRGVNW-VAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQ 265
Query: 235 DLVLSASGDKSVHIW 249
DL+LS DK++ W
Sbjct: 266 DLILSVGEDKTIRAW 280
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 60/266 (22%), Positives = 109/266 (40%)
Query: 95 QDKIDMLMEKLDRESIINEKYPEC-NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLK 153
+DK+D L+ ++ YP+ D+ + N K N K+ N ++ K L+
Sbjct: 174 RDKLDQLILM---HVFYSKLYPKIIRDIHNIDNNWKRGN-YKMTRINCQSENSKGVYCLQ 229
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFS------GHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
KIVS + + + + + +S GH V + ++ V+ S S+D TVR+W
Sbjct: 230 YDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVW 287
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-----------INWE 256
+TG+C+ H +V +RF ++++ S D+S+ +W V +
Sbjct: 288 DVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHR 345
Query: 257 CLVXXXXXXXXXXXXKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312
V D + S+ V+ L GH + + G V++ S
Sbjct: 346 AAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSS 403
Query: 313 DRVANLFDVETGTILQSLTEPGEAIR 338
D L+D+ +G L+ L E +R
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEELVR 429
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ +GHR G+ + R G+ V+ S S+D T+RLW +G C+ GH V +RF
Sbjct: 378 VRTLAGHRRGIACLQYR-GRLVV-SGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF-- 433
Query: 233 NKDLVLSASGDKSVHIW--QAVIN 254
++ ++S + D + +W QA ++
Sbjct: 434 DEKRIVSGAYDGKIKVWDLQAALD 457
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 60/266 (22%), Positives = 109/266 (40%)
Query: 95 QDKIDMLMEKLDRESIINEKYPEC-NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLK 153
+DK+D L+ ++ YP+ D+ + N K N K+ N ++ K L+
Sbjct: 174 RDKLDQLILM---HVFYSKLYPKIIRDIHNIDNNWKRGN-YKMTRINCQSENSKGVYCLQ 229
Query: 154 VQTSKIVSSFKTSLLSCYKIRSFS------GHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
KIVS + + + + + +S GH V + ++ V+ S S+D TVR+W
Sbjct: 230 YDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVW 287
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-----------INWE 256
+TG+C+ H +V +RF ++++ S D+S+ +W V +
Sbjct: 288 DVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHR 345
Query: 257 CLVXXXXXXXXXXXXKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312
V D + S+ V+ L GH + + G V++ S
Sbjct: 346 AAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSS 403
Query: 313 DRVANLFDVETGTILQSLTEPGEAIR 338
D L+D+ +G L+ L E +R
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEELVR 429
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ +GHR G+ + R G+ V+ S S+D T+RLW +G C+ GH V +RF
Sbjct: 378 VRTLAGHRRGIACLQYR-GRLVV-SGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF-- 433
Query: 233 NKDLVLSASGDKSVHIW--QAVIN 254
++ ++S + D + +W QA ++
Sbjct: 434 DEKRIVSGAYDGKIKVWDLQAALD 457
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 126 (49.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+ R + H + ++D++ G L +AS D+T+++W + KC GH+G+V S+
Sbjct: 120 RFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSH 179
Query: 232 P-NKDLVLSASGDKSVHIW 249
P N DL++S S D +W
Sbjct: 180 PTNSDLLVSGSRDGCFALW 198
Score = 54 (24.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 288 LLGHSNVVIAADWL-SDGEQVITASWDRVANLFDVE 322
L GH V A DW S+ +V TAS D L+++E
Sbjct: 377 LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIE 412
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 197 SASADRTVRLWS----TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 252
S+S D+TV LW + +CV GH V+S+ P+ + S D + +W A
Sbjct: 166 SSSQDQTVMLWQWNVDSNAVECVSICKGHERGVDSISVSPDATRFATGSWDTMLKVWSAA 225
Query: 253 INWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 312
+ K P E+ + RTP+ L GH + A W+ D ++T SW
Sbjct: 226 ED--------DAGGDAASSKRPKENGV--RTPIMTLQGHRESISAVQWI-DTSTLLTTSW 274
Query: 313 DRVANLFDV 321
D ++D+
Sbjct: 275 DHTMKIWDL 283
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFL 231
R+F GH + V V+ + S S DRT++LW+T G C + GH+ V+ VRF
Sbjct: 99 RTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNT-LGDCKYTITDKGHTEWVSCVRFS 157
Query: 232 PNKD--LVLSASGDKSVHIWQ 250
PN +++SA DK V +W+
Sbjct: 158 PNPQNPVIVSAGWDKLVKVWE 178
Score = 118 (46.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y RS GH V D + SAS D+++RLW +G+ + GH+ V SV F
Sbjct: 54 YPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSF 113
Query: 231 LPNKDLVLSASGDKSVHIWQAV 252
+ ++S S D+++ +W +
Sbjct: 114 SADNRQIVSGSRDRTIKLWNTL 135
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
+GH+ + DG + D V L+D+ L SL G+ I A
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL-HAGDEIHA 238
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 36/156 (23%), Positives = 68/156 (43%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH V DVA P V + D R+W +TG+C++ GH+ ++SV ++PN +
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 238 LSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI-------TLRT------- 283
++ S D S+ +W + + + TL+
Sbjct: 396 ITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQ 455
Query: 284 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 319
P+++L GH ++ D DG+ + ++++DR L+
Sbjct: 456 PLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 143 (55.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 133 KQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRP 190
K+ +AS+ A + +T +KL +SKI T LS RSF GH D + P
Sbjct: 2 KKTTIASSAVASQKQTQSKLGNTSSKITEQQTTHDPALS----RSFRGHEDIITCADFDP 57
Query: 191 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 250
+ S S D V +W+ + + ++ GH G+V V++ P+ + + S D+ + +WQ
Sbjct: 58 KMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQ 117
Query: 251 AVINWECLV 259
+ +C +
Sbjct: 118 NTVQSKCSI 126
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 31/105 (29%), Positives = 47/105 (44%)
Query: 147 KTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTV 204
KT + KIVS + T + +I S+S H D V V P L S+S D +
Sbjct: 195 KTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKI 254
Query: 205 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++ ++ K + Y+ H VNS+ P + SA D + IW
Sbjct: 255 KITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLW-STQTGKCVLQYSGHSGSVNSVRFLPNK 234
F GH+ V+ V P + S DR +RLW +T KC + H G++ S+ F +
Sbjct: 85 FVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSI-IKAHCGAIRSMSFSADG 143
Query: 235 DLVLSASGDKSVHIWQ 250
+LS+S DK++ +W+
Sbjct: 144 GYLLSSSDDKTLKLWR 159
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 45/167 (26%), Positives = 76/167 (45%)
Query: 164 KTSLLS--CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH 221
K S++ C IRS S DG + L S+S D+T++LW Q K + ++GH
Sbjct: 123 KCSIIKAHCGAIRSMSFSADGGY----------LLSSSDDKTLKLWRLQDKKFMCSFAGH 172
Query: 222 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITL 281
V S P+ LV S S DK+V +W +N++ +V + + S +
Sbjct: 173 KNWVRSGVISPDMRLVASGSDDKTVMLWD--LNFQKIVSKYSTLDDNVKISQINSYSDHM 230
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 328
T V ++L H DG +I++S+D + D+ + ++Q
Sbjct: 231 DT-VSQVLFHP----------DGTCLISSSFDHKIKITDIRSNKLIQ 266
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 7/43 (16%), Positives = 23/43 (53%)
Query: 280 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
T+++ + H + + + +DG ++++S D+ L+ ++
Sbjct: 119 TVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQ 161
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 128 (50.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 173 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+RS +GH V DV + GQ L S S D+T+RLW G Q+ H+ V SV F
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 232 PNKDLVLSASGDKSVHIWQAV 252
+ ++S S DKS+ +W +
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTL 141
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
+GH+ V DG + D A L+D+ G L +L PG +
Sbjct: 195 IGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--PGNDV 241
Score = 41 (19.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
G S I+ W DG+ + D + ++ V
Sbjct: 288 GSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 4/15 (26%), Positives = 12/15 (80%)
Query: 307 VITASWDRVANLFDV 321
+++A WD+V ++++
Sbjct: 171 IVSAGWDKVVKVWNL 185
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 128 (50.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 173 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 231
+RS +GH V DV + GQ L S S D+T+RLW G Q+ H+ V SV F
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 232 PNKDLVLSASGDKSVHIWQAV 252
+ ++S S DKS+ +W +
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTL 141
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAI 337
+GH+ V DG + D A L+D+ G L +L PG +
Sbjct: 195 IGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--PGNDV 241
Score = 41 (19.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 290 GHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
G S I+ W DG+ + D + ++ V
Sbjct: 288 GSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 4/15 (26%), Positives = 12/15 (80%)
Query: 307 VITASWDRVANLFDV 321
+++A WD+V ++++
Sbjct: 171 IVSAGWDKVVKVWNL 185
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ GH+D + V P + S+S D +R+W+ Q+ C+ + +GH+ V S F P
Sbjct: 88 TLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKD 147
Query: 235 DLVLSASGDKSVHIW 249
DLV+SAS D+++ IW
Sbjct: 148 DLVVSASLDQTIRIW 162
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 175 SFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
S GH GV W + P QP + SAS D V+LW V + GH +V+ F P
Sbjct: 199 SLEGHDRGVNW-ASFHPTQPYIVSASDDHQVKLWR-MNDPIVDTFRGHYNNVSCALFHPR 256
Query: 234 KDLVLSASGDKSVHIWQAV 252
+DL++S S DK++ +W +
Sbjct: 257 QDLIISNSEDKTIRVWDII 275
>UNIPROTKB|F1P2D7 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0033186 "CAF-1 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:AADN02010795 IPI:IPI01017347 Ensembl:ENSGALT00000025844
Uniprot:F1P2D7
Length = 566
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 195 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 247
L SA D VR+W + G K ++++ + H+ +VN VRF P+ + VL++ GD +V
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGE-VLASGGDDAV- 89
Query: 248 IWQAVINWECLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGE 305
++ W+ ++ DE+ + T VK L GH V W SDG
Sbjct: 90 ----ILLWKL---NDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGN 142
Query: 306 QVITASWDRVANLFDVETGTILQSLTE 332
+ +AS D A ++DV G + L E
Sbjct: 143 YMASASVDNTAIMWDVVKGQKVSILNE 169
>UNIPROTKB|Q5R1S9 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031497 "chromatin assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 HOGENOM:HOG000183312 KO:K10751
EMBL:AB195693 EMBL:AJ719705 IPI:IPI00585257 RefSeq:NP_001008677.2
UniGene:Gga.8862 ProteinModelPortal:Q5R1S9 IntAct:Q5R1S9
STRING:Q5R1S9 GeneID:418514 KEGG:gga:418514 CTD:8208
InParanoid:Q5ZLM9 OrthoDB:EOG4G4GQD NextBio:20821686 PRINTS:PR00319
Uniprot:Q5R1S9
Length = 566
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 195 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 247
L SA D VR+W + G K ++++ + H+ +VN VRF P+ + VL++ GD +V
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGE-VLASGGDDAV- 89
Query: 248 IWQAVINWECLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGE 305
++ W+ ++ DE+ + T VK L GH V W SDG
Sbjct: 90 ----ILLWKL---NDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGN 142
Query: 306 QVITASWDRVANLFDVETGTILQSLTE 332
+ +AS D A ++DV G + L E
Sbjct: 143 YMASASVDNTAIMWDVVKGQKVSILNE 169
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 139 (54.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 30/77 (38%), Positives = 38/77 (49%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+++F GHRD V VA+ P + S S DR V+ W +TG L GH SV SV P
Sbjct: 521 VKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSP 580
Query: 233 NKDLVLSASGDKSVHIW 249
+ SGD IW
Sbjct: 581 TGGFFATGSGDMRARIW 597
Score = 130 (50.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 48/171 (28%), Positives = 72/171 (42%)
Query: 181 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY----SGHSGSVNSVRFLPNKDL 236
DGV VA+ P + + S D++VR+W G C ++ GH SV SV F PN
Sbjct: 430 DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG-CPVERLEGPDGHKDSVYSVAFSPNGRD 488
Query: 237 VLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGHSNVVI 296
+++ S DK++ +W+ ++ S R VK GH + V+
Sbjct: 489 LVTGSLDKTIKLWELA---------------TPRGNMQNQGSKGGRC-VKTFEGHRDFVL 532
Query: 297 AADWLSDGEQVITASWDRVANLFDVETG-TILQSLTEPGEAIRAAAGRTGG 346
+ D + V++ S DR +D TG T L I A TGG
Sbjct: 533 SVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG 583
Score = 123 (48.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 29/84 (34%), Positives = 40/84 (47%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------GKCVLQYSGHSGSV 225
GH+D V+ VA P L + S D+T++LW T G+CV + GH V
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFV 531
Query: 226 NSVRFLPNKDLVLSASGDKSVHIW 249
SV P+ V+S S D+ V W
Sbjct: 532 LSVALTPDNQWVMSGSKDRGVQFW 555
Score = 40 (19.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 44 LGDQDLSMLRTHLNSEYDD 62
LGD D+ + +H DD
Sbjct: 257 LGDLDIERIPSHFKKSRDD 275
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH DGV ++++ +L + S D VR+W ++G+ +L + GHS V SV + PN +
Sbjct: 428 GHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQL 487
Query: 238 LSASGDKSVHIW 249
S+S D +V IW
Sbjct: 488 ASSSEDNTVVIW 499
>TAIR|locus:2181733 [details] [associations]
symbol:AT5G02430 "AT5G02430" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AL162971 HOGENOM:HOG000239143
ProtClustDB:CLSN2683085 IPI:IPI00534660 PIR:T48264
RefSeq:NP_195863.1 UniGene:At.54687 ProteinModelPortal:Q9LZ59
SMR:Q9LZ59 PaxDb:Q9LZ59 PRIDE:Q9LZ59 EnsemblPlants:AT5G02430.1
GeneID:831780 KEGG:ath:AT5G02430 TAIR:At5g02430 InParanoid:Q9LZ59
OMA:RRENANS PhylomeDB:Q9LZ59 Genevestigator:Q9LZ59 Uniprot:Q9LZ59
Length = 905
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 45/127 (35%), Positives = 66/127 (51%)
Query: 139 SNPSAQKLKTT-NKLKVQTSKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLG 196
S +K KT+ +K Q V + +T LS I SF+GH D V D++ Q +L
Sbjct: 476 SQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLL- 534
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW----QA 251
S+S D+TVRLW +T C L+ H+ V V+F P ++D +S S D + IW +
Sbjct: 535 SSSMDKTVRLWDIETQSC-LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQ 593
Query: 252 VINWECL 258
V+ W L
Sbjct: 594 VVEWNDL 600
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 40/150 (26%), Positives = 71/150 (47%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
SGH GVW + G +L S S DRTVR+W + G C + GH+ +V + + K++
Sbjct: 419 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNI 477
Query: 237 --VLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSI---TLR---TPVKEL 288
+++ S D ++H+W+ + + P+E+ LR V+ +
Sbjct: 478 KYIVTGSRDNTLHVWK-LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 536
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANL 318
GH N+V++ + D ++ WD VA +
Sbjct: 537 SGHGNIVVSGSY--DNTLIV---WD-VAQM 560
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 150 NKLKVQTSK-IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 208
N L V + V+ F T ++ + H + V+D+A PG L +AS D+T RLW
Sbjct: 66 NCLAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWVPGTNCLVTASGDQTARLWD 125
Query: 209 TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DKSVHIW 249
TG + + GH S+ SV F + V S G D ++ IW
Sbjct: 126 VITGDLLGTFKGHQCSLKSVAFYKQEKAVFSTGGRDGNIMIW 167
>UNIPROTKB|G5EI73 [details] [associations]
symbol:MGCH7_ch7g141 "Serine-threonine kinase
receptor-associated protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016301 EMBL:CM000230
EMBL:CM001237 KO:K13137 RefSeq:XP_003721358.1
ProteinModelPortal:G5EI73 EnsemblFungi:MGG_10588T0 GeneID:2682201
KEGG:mgr:MGG_10588 Uniprot:G5EI73
Length = 351
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I +F GH+ VW + P +ASAD + ++W++ TG+ VL H V ++ + P
Sbjct: 57 IGTFIGHKGAVWQAKLSPDMSNAATASADFSCKIWNSHTGE-VLFTLKHEHIVRAIAYPP 115
Query: 233 N-KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRTPVKELLGH 291
N D+V + +K + +W + + + I T H
Sbjct: 116 NTSDMVATGGFEKKLRLWDL----QAASKKLAETTEEVAVESSEAHEIGAGT-------H 164
Query: 292 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
++ + A W D ++ITAS + FDV T +++++L
Sbjct: 165 TDPIKAIVWAPDPTKIITAS-GKTLRWFDVPTKSLVKTL 202
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K + GH +V+ F P +
Sbjct: 204 GHDRGVNW-AAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQ 262
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 263 ELILSNSEDKSIRVW 277
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 120 (47.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 174 RSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
R+ GH V DV + GQ L S S D T+RLW TG ++ GH+ V SV F
Sbjct: 16 RALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 74
Query: 233 NKDLVLSASGDKSVHIWQAV 252
+ ++S S DK++ +W +
Sbjct: 75 DNRQIVSGSRDKTIKLWNTL 94
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 289 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+GH+ + DG + D A L+D+ G L +L
Sbjct: 148 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 189
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 135 (52.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 45/180 (25%), Positives = 70/180 (38%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R GH V VA P + SADRT+++W TG L +GH V +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 234 KDLVLSASGDKSVHIW-----QAVINWE-------CLVXXXXXXXXXXXXKEPDESSITL 281
+ SA DK V W + + ++ CL ++ +
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 282 RTPVK--ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRA 339
RT ++ L GH N V + QV+T S D +D+ G + +LT +++RA
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
IRS+ GH GV+ +A+ P VL + D R+W +T + SGH +V SV P
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 233 NKDLVLSASGDKSVHIW 249
V++ S D ++ W
Sbjct: 313 TDPQVVTGSHDTTIKFW 329
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/175 (23%), Positives = 70/175 (40%)
Query: 174 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 233
R F GH+D + P L + S D+++ +W+ ++ GH+ + V F P+
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 234 KDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXX---------KEPDESSITL-RT 283
LV S+S D++V +W I E V D+ S+ +
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Query: 284 PVKELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPG 334
K+ L H+N V A + DG + + DR L+D + + T+ G
Sbjct: 132 ERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYG 186
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 134 (52.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 192 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIWQ 250
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199
Query: 251 A--------VI----NW--ECLVXXXXXXX-XXXXXKEPDESSITLRTPVKELLGHSNVV 295
V+ NW C K ++ T +++L GH + V
Sbjct: 200 LKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDV 259
Query: 296 IAADWLSDGEQVITASWDRVANLFDVETGTIL 327
+A D+ DG + TAS+D ++D TG IL
Sbjct: 260 VACDFSPDGALLATASYDTRVYIWDPHTGAIL 291
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 118 (46.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 172 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ---YSGHSGSVNSV 228
K+ GH D VW+VA P +L S D+++RLW + G V + GH +V V
Sbjct: 5 KLSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGV 64
Query: 229 RFLPNKDLVLSASGDKSVHIWQ 250
+ + S+S D + IW+
Sbjct: 65 SWSNCGRYLASSSFDGTTCIWR 86
Score = 53 (23.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
L GH N V A W G + T S D+ +++V
Sbjct: 98 LEGHENEVKACGWSPSGRFLATCSRDKTVWIWEV 131
Score = 42 (19.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 291 HSNVVIAADWLSDGEQVITASWDRVANLF 319
HS V W D +++ +AS+D F
Sbjct: 146 HSQDVKKVLWHPDRDELASASYDNTIRFF 174
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 127 (49.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
+ + H+ G+WDV+ +L ++S D+TV++WS T + GH+ +V F+ +
Sbjct: 528 TLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQ 587
Query: 235 DLVLSASGDKSVHIWQAVINWECL 258
++S D + IW + ECL
Sbjct: 588 KQLISCGADGLIKIWDCS-SGECL 610
Score = 109 (43.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 25/106 (23%), Positives = 50/106 (47%)
Query: 146 LKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRT 203
L +N L ++ I + + K+ ++ H + ++V P + +AS D+T
Sbjct: 455 LTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDKT 514
Query: 204 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
++W+ + G+ + H + V F L+ ++SGDK+V IW
Sbjct: 515 CKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIW 560
Score = 55 (24.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRV 315
+K L GH+N + A ++DG+ +++A D V
Sbjct: 610 LKTLDGHNNRLWALSTMNDGDMIVSADADGV 640
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 133 (51.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 45/183 (24%), Positives = 69/183 (37%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R SGH V +AV P S + DRT+++W +G+ L +GH +V + P
Sbjct: 194 MRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSP 253
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPD-ESSIT----------- 280
+ S + DK V W N P + +T
Sbjct: 254 RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWD 313
Query: 281 --LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIR 338
R+ + L GH+ V QVIT S D ++D+ G + LT + +R
Sbjct: 314 MRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVR 373
Query: 339 AAA 341
A A
Sbjct: 374 ALA 376
Score = 43 (20.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 45 GDQDLSMLRTHLNSEYDDV-VLPSSV 69
GD D L NSEY D+ LP ++
Sbjct: 49 GDLDRDTLALRFNSEYADLRELPPAL 74
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 132 (51.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 176 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 235
F GH +AV P + S + D T +LW + G C +SGH +N++ F PN +
Sbjct: 180 FLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGE 239
Query: 236 LVLSASGDKSVHIWQA-------VINWECLVXXXXXXXXXXXXK----EPDESSITLRTP 284
+ + S D + ++ V + E ++ + D+ + +
Sbjct: 240 AICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDS 299
Query: 285 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 320
+K L GH N V +DG V T SWD +++
Sbjct: 300 LKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00058, P = 0.00058
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 195 LGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ--- 250
L S S D T+ LWS + K + + +GH +N V F P+ ++ SAS DKS+ +W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 251 ----AVINWECLVXXXXXXXXXXXXKEPDESSITLRT-PVK------ELLGHSNVVIAAD 299
A + S TL+ VK +L GH++ V A D
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVD 463
Query: 300 WLSDGEQVITASWDRVANLF 319
W DG++V + D+ ++
Sbjct: 464 WSPDGQRVASGGKDKCLRIW 483
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 177 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 236
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 237 VLSASGDKSVHIW 249
++S S D ++ +W
Sbjct: 429 LVSGSSDSTLKVW 441
Score = 114 (45.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 174 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 228
R+ +GH + W+ + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 193 RALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Query: 229 RFLPNKDLVLSASGDKSVHIWQA 251
R+ L+ SAS D+++ +W+A
Sbjct: 253 RW-GGDGLLYSASQDRTIKVWRA 274
Score = 63 (27.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 282 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
+ P+ + GH ++ + D + +AS+D+ L+D TG L SL
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL 410
Score = 55 (24.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEA 336
L GH V W +D +++ S D ++DV+ + L PG A
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADL--PGHA 456
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 136 (52.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 148 TTNKLKVQTSKIVSSFKTSLLSCYK-IRSFSGHRDGVWD-VAVRPGQPVLGSASADR-TV 204
TT + TS + + + L Y+ R+F+ R + VAV ++ + + D +
Sbjct: 424 TTTGHVIVTSSLDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEI 483
Query: 205 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLVXXXXX 264
+WS QTG+ + SGH G V+ + F P K ++ SAS DK+V +W +W
Sbjct: 484 FVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWDMFDSWRTKETLTLT 543
Query: 265 XXXXXXXKEPDESSITLRT 283
PD + + + T
Sbjct: 544 SDALAVTFRPDGAELAVAT 562
Score = 46 (21.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 10 FLKDLIRTHNMPQSDTMSQKSTKHKRTASGKLSNLGD 46
F + H +P+ + + S +R AS +++ GD
Sbjct: 307 FASGIFHLHELPEFNLIHSLSISDQRVASVAINSSGD 343
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 175 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 234
S+ GH VWDV P +AS D+T RLW+T + ++GH V+ V F PN
Sbjct: 554 SYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNS 613
Query: 235 DLVLSASGDKSVHIW 249
+ V + S DK+ +W
Sbjct: 614 NYVFTGSSDKTCRMW 628
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 171 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 230
Y +R F+GH + V V P + + S+D+T R+W TG CV + GH+ SVN +
Sbjct: 592 YPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAV 651
Query: 231 LPNKDLVLSASGDKSVHIW 249
P+ + S D + +W
Sbjct: 652 SPDGRWLASGGEDGIICVW 670
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 70 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 129
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 130 CAQFHPSEDLVVSASLDQTVRVW 152
Score = 121 (47.7 bits), Expect = 0.00060, P = 0.00060
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 193 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 251
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 252 ELILSNSEDKSIRVW 266
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH D + V P + SAS D+T+R+W+ Q+ C+ +GH+ V F P +DLV
Sbjct: 91 GHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
Query: 238 LSASGDKSVHIW 249
+SAS D++V +W
Sbjct: 151 VSASLDQTVRVW 162
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W + P P++ S + DR V+LW K V GH +V+SV F +
Sbjct: 202 GHDRGVNW-ASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ 260
Query: 235 DLVLSASGDKSVHIWQA 251
D+++S S DKS+ +W A
Sbjct: 261 DIIVSNSEDKSIRVWDA 277
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P++DLV+SAS D++V +W
Sbjct: 140 CAQFHPSEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
>UNIPROTKB|Q13112 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0042393 "histone binding" evidence=NAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0033186
"CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin assembly"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=TAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005737 GO:GO:0006461
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 GO:GO:0051082 GO:GO:0006281
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0042393 GO:GO:0006335 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
EMBL:U20980 EMBL:AP000694 EMBL:AP001725 EMBL:BC021218 EMBL:X98262
IPI:IPI00011857 PIR:B56731 RefSeq:NP_005432.1 UniGene:Hs.75238
ProteinModelPortal:Q13112 SMR:Q13112 DIP:DIP-29243N IntAct:Q13112
STRING:Q13112 PhosphoSite:Q13112 DMDM:3121829 PaxDb:Q13112
PRIDE:Q13112 DNASU:8208 Ensembl:ENST00000314103 GeneID:8208
KEGG:hsa:8208 UCSC:uc002yvj.3 GeneCards:GC21P037757 HGNC:HGNC:1911
HPA:CAB033604 HPA:HPA021679 MIM:601245 neXtProt:NX_Q13112
PharmGKB:PA26447 HOVERGEN:HBG050780 InParanoid:Q13112
PhylomeDB:Q13112 ChiTaRS:CHAF1B GenomeRNAi:8208 NextBio:30919
Bgee:Q13112 CleanEx:HS_CHAF1B CleanEx:HS_MPP7 Genevestigator:Q13112
GermOnline:ENSG00000159259 Uniprot:Q13112
Length = 559
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 195 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 247
L SA D VR+W + G K ++++ + H+ +VN VRF P +++ S D +
Sbjct: 32 LASAGVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 248 IWQAVINWECLVXXXXXXXXXXXXKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGE 305
+W+ N E ++ DE+ + T VK L GH V W +DG
Sbjct: 92 LWKVNDNKE---------PEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGN 142
Query: 306 QVITASWDRVANLFDVETGTILQSLTE 332
+ +AS D A ++DV G + E
Sbjct: 143 LMASASVDNTAIIWDVSKGQKISIFNE 169
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 150 NKLKVQTSKIVSSFKTSLLSCYKI--RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 207
N +K+ + VS+ S+ I ++F+GH+D + V V P + S S DRT++ W
Sbjct: 492 NTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Query: 208 STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
S + L GH+ SV SV PN + SGD IW
Sbjct: 552 SPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 136 (52.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+ GH GVW + G ++ S S DRT+++W +G CV GH+ +V +
Sbjct: 1028 LRTLVGHTGGVWSSQMS-GNIII-SGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHG 1085
Query: 233 NKDLVLSASGDKSVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSIT--------LRTP 284
+K V+S S D ++ +W + CL + + ++ + P
Sbjct: 1086 SK--VVSGSRDATLRVWD-IEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHP 1142
Query: 285 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 330
++ L GH+N V + + DG V++ S D ++DVETG +L
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Score = 49 (22.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 112 NEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 171
++ +P ++ V++ +K K L++ P++ + T ++L T+K+ SC
Sbjct: 411 SDDWPSSSNGRTVSSDSKYTYKD--LSTTPTSSRKYTNSRLSKSTAKLNLGSSLGASSCS 468
Query: 172 KIRSFS 177
+ RS S
Sbjct: 469 QHRSGS 474
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 137 (53.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 186 VAVRPGQPVLGSASADR-TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 244
+AV P V+ + S D V +WS QTG+ + Q SGH G V++V F P+ L++S S DK
Sbjct: 434 MAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDK 493
Query: 245 SVHIWQAVINWECLVXXXXXXXXXXXXKEPDESSITLRT 283
+ IW + PD S + + T
Sbjct: 494 TARIWSVFNRTQTSEPLQLQADVLSVAVRPDSSQLAVST 532
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/160 (20%), Positives = 74/160 (46%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 237
GH D + +A P + +A+ D +++W ++G C++ ++ H+ V + +F +++
Sbjct: 341 GHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVL 400
Query: 238 LSASGDKSVHIWQAV-------------INWECLVXXXXXXXXXXXXKEPDESSI-TLRT 283
+AS D S+ W + +++ C+ + + I +++T
Sbjct: 401 FTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQT 460
Query: 284 P--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 321
+ +L GH V A + DG +++ SWD+ A ++ V
Sbjct: 461 GQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSV 500
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 119 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 178
+D EC+T + + N+ K +A PS +L T ++ K + I + C + +
Sbjct: 93 DDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDK--SVWIWEVDEEDEYECVSV--VNS 148
Query: 179 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDL 236
H V V P Q +L S S D V ++ + +C GH+ +V + F P+
Sbjct: 149 HTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQR 208
Query: 237 VLSASGDKSVHIWQ 250
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVKIWK 222
Score = 114 (45.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 173 IRSFSGHRDG-VWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKC--VLQYSGHSGSVNS 227
++ F+ H D W VA P +L S DR +R+W + + +C VLQ GH +V
Sbjct: 8 LQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQ-DGHQRAVRK 66
Query: 228 VRFLPNKDLVLSASGDKSVHIWQAVIN-WECL 258
V + P + + SAS D + IW+ + +ECL
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKKNDDFECL 98
Score = 57 (25.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 288 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 322
L GH N V W G Q+ T S D+ +++V+
Sbjct: 101 LEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVD 135
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 164 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCV---LQYS 219
K +LL C SGHR VW P PVL + D+T+R+W+ TG+ V +
Sbjct: 3 KLTLLQC-----LSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSD 57
Query: 220 GHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
GH+ ++ V + P + SAS D +V IW
Sbjct: 58 GHTRTIRDVAWSPCGRFLASASFDATVAIW 87
Score = 123 (48.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/184 (26%), Positives = 76/184 (41%)
Query: 178 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKD 235
GH + DVA P L SAS D TV +W ++G+ C GH V SV + +
Sbjct: 58 GHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGA 117
Query: 236 LVLSASGDKSVHIWQAVIN--WECLVXXXXXXXXXXXXK-EPDESSITLRTPVKELLGHS 292
L+ + S DKSV IW+ +EC + P+E + + + +
Sbjct: 118 LLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYR 177
Query: 293 NVVIAADW-----LSDGEQVI-----TASWDRVANLFDVETGTILQSLTEPGEAIRAAA- 341
+ +DW L+ + + AS R+A+ D +T I Q +PG A
Sbjct: 178 EDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEY-KPGNEFGVACP 236
Query: 342 -GRT 344
G+T
Sbjct: 237 DGKT 240
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 197 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 249
SAS D TVRLW + G C+ + H V SV F P+ + S S DK VHIW
Sbjct: 414 SASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIW 466
Score = 111 (44.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
I++F GH + V + P +L S S D T++LWS + CV HS + ++++ P
Sbjct: 338 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSP 397
Query: 233 --------NKDLVL--SASGDKSVHIWQA 251
N +L+L SAS D +V +W A
Sbjct: 398 TGPGTNNPNANLMLARSASFDSTVRLWDA 426
Score = 66 (28.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 285 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRT 344
+ L H V + + DG + + S+D+ ++++ ++G ++ S G T
Sbjct: 432 IHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNST 491
Query: 345 GGPIRAS 351
G + AS
Sbjct: 492 GDKVGAS 498
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 137 (53.3 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 173 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 232
+R+F+GHR V P L S S+D +R+W T+ C+ Y GH+ ++++ F P
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 152
Query: 233 NKDLVLSASGDKSVHIW 249
+ V+S D V +W
Sbjct: 153 DGRWVVSGGLDNVVKVW 169
Score = 45 (20.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 309 TASWDRVANLFDVETGTILQSLTEPGEAIRAAAGRTGG 346
T S DR +D+ET ++ + +RA A G
Sbjct: 201 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDG 238
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 171 YKIRS--FS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 226
YK+R F+ GH D + P + SAS D+T+R+W+ Q+ CV +GH+ V
Sbjct: 80 YKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVM 139
Query: 227 SVRFLPNKDLVLSASGDKSVHIW 249
+F P +DLV+SAS D++V +W
Sbjct: 140 CAQFHPTEDLVVSASLDQTVRVW 162
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 178 GHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFLPNK 234
GH GV W A P P++ S + DR V++W K V GH +V+ F P +
Sbjct: 203 GHDRGVNW-AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 235 DLVLSASGDKSVHIW 249
+L+LS S DKS+ +W
Sbjct: 262 ELILSNSEDKSIRVW 276
WARNING: HSPs involving 398 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 360 338 0.00094 116 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 648
No. of states in DFA: 614 (65 KB)
Total size of DFA: 230 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 30.00u 0.08s 30.08t Elapsed: 00:00:19
Total cpu time: 30.06u 0.09s 30.15t Elapsed: 00:00:20
Start: Thu Aug 15 12:08:27 2013 End: Thu Aug 15 12:08:47 2013
WARNINGS ISSUED: 2