Your job contains 1 sequence.
>psy1102
MGLSVPTGGFLGTELALLISWCFLLSEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGK
HLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRHSHTDFINLACGSMICQTVWTWWG
GAPPQSLNWNLLGSASPF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1102
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260862 - symbol:Vti1 species:7227 "Drosophila mel... 174 2.7e-13 1
ZFIN|ZDB-GENE-050809-135 - symbol:vti1a "vesicle transpor... 155 2.8e-11 1
UNIPROTKB|E1BYU6 - symbol:VTI1A "Uncharacterized protein"... 154 3.5e-11 1
UNIPROTKB|Q96AJ9 - symbol:VTI1A "Vesicle transport throug... 154 3.5e-11 1
UNIPROTKB|J9NRK3 - symbol:VTI1A "Uncharacterized protein"... 153 4.5e-11 1
RGD|621490 - symbol:Vti1a "vesicle transport through inte... 151 7.4e-11 1
MGI|MGI:1855699 - symbol:Vti1a "vesicle transport through... 148 1.5e-10 1
UNIPROTKB|E1BUX5 - symbol:VTI1B "Uncharacterized protein"... 134 7.0e-09 1
SGD|S000004810 - symbol:VTI1 "Protein involved in cis-Gol... 127 3.4e-08 1
MGI|MGI:1855688 - symbol:Vti1b "vesicle transport through... 127 4.5e-08 1
RGD|2323682 - symbol:LOC100359512 "vesicle transport thro... 123 1.3e-07 1
RGD|1560475 - symbol:RGD1560475 "similar to vesicle trans... 123 1.3e-07 1
UNIPROTKB|P58200 - symbol:Vti1b "Vesicle transport throug... 123 1.3e-07 1
ZFIN|ZDB-GENE-040426-1148 - symbol:vti1b "vesicle transpo... 122 1.5e-07 1
UNIPROTKB|Q9UEU0 - symbol:VTI1B "Vesicle transport throug... 121 2.2e-07 1
ASPGD|ASPL0000044157 - symbol:AN1973 species:162425 "Emer... 120 2.6e-07 1
WB|WBGene00013302 - symbol:vti-1 species:6239 "Caenorhabd... 120 2.6e-07 1
UNIPROTKB|F1N1Z0 - symbol:VTI1B "Vesicle transport throug... 118 5.0e-07 1
UNIPROTKB|Q2KIU0 - symbol:VTI1B "Vesicle transport throug... 118 5.0e-07 1
UNIPROTKB|F1SA25 - symbol:VTI1B "Uncharacterized protein"... 114 1.4e-06 1
UNIPROTKB|J9NYA0 - symbol:VTI1B "Uncharacterized protein"... 105 1.5e-05 1
UNIPROTKB|G4NC77 - symbol:MGG_01124 "Vesicle transport V-... 101 4.2e-05 1
UNIPROTKB|F1S5L0 - symbol:VTI1A "Uncharacterized protein"... 95 0.00039 1
>FB|FBgn0260862 [details] [associations]
symbol:Vti1 species:7227 "Drosophila melanogaster"
[GO:0005484 "SNAP receptor activity" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISS] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 GO:GO:0006886 EMBL:AE014296 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 GO:GO:0005484 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 OMA:QYCELST GeneTree:ENSGT00530000063466
EMBL:AY058584 RefSeq:NP_612053.1 UniGene:Dm.20008 SMR:Q9W0N6
IntAct:Q9W0N6 MINT:MINT-921667 STRING:Q9W0N6
EnsemblMetazoa:FBtr0072607 GeneID:38085 KEGG:dme:Dmel_CG3279
UCSC:CG3279-RA CTD:38085 FlyBase:FBgn0260862 InParanoid:Q9W0N6
OrthoDB:EOG43FFD3 GenomeRNAi:38085 NextBio:806919 Uniprot:Q9W0N6
Length = 230
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 36/68 (52%), Positives = 44/68 (64%)
Query: 34 SENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRT 93
S +I+ +Q QRLLD SE IERTG L GYR+A+ETE++ VL DL QRETLQ
Sbjct: 110 SYEDVSISTDQRQRLLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGA 169
Query: 94 RTRHSHTD 101
R R T+
Sbjct: 170 RARLRETN 177
>ZFIN|ZDB-GENE-050809-135 [details] [associations]
symbol:vti1a "vesicle transport through interaction
with t-SNAREs homolog 1A (yeast)" species:7955 "Danio rerio"
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
ZFIN:ZDB-GENE-050809-135 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
GO:GO:0005622 SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573
KO:K08493 CTD:143187 HOVERGEN:HBG104027 OrthoDB:EOG4V6ZHV
EMBL:BC099994 IPI:IPI00510396 RefSeq:NP_001030152.1
UniGene:Dr.134790 ProteinModelPortal:Q499B4 SMR:Q499B4
STRING:Q499B4 GeneID:567385 KEGG:dre:567385 InParanoid:Q499B4
NextBio:20888649 Uniprot:Q499B4
Length = 191
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 27 EYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQ 86
E E ++ ++ +E Q LLD +E +ER+ + LE GY+IA+ETE++ ++L +L S
Sbjct: 98 EVRNELLGDDGSS-SETQRAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILANLHSD 156
Query: 87 RETLQRTRTRHSHTDFINLACGSMI 111
RE +QR+R R TD NL S I
Sbjct: 157 REKIQRSRDRLRETD-ANLGKSSRI 180
>UNIPROTKB|E1BYU6 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005484 "SNAP receptor
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 GO:GO:0005794 GO:GO:0006886
GO:GO:0016020 GO:GO:0042147 SUPFAM:SSF47661 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:AADN02030905 IPI:IPI00597059
Ensembl:ENSGALT00000014431 Uniprot:E1BYU6
Length = 187
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 39 NINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRHS 98
N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R R
Sbjct: 109 NSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLR 168
Query: 99 HTDFINLACGSMI 111
TD NL S I
Sbjct: 169 ETD-ANLGKSSRI 180
>UNIPROTKB|Q96AJ9 [details] [associations]
symbol:VTI1A "Vesicle transport through interaction with
t-SNAREs homolog 1A" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005484 "SNAP receptor activity" evidence=IDA] [GO:0031201
"SNARE complex" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0000139 GO:GO:0043025
EMBL:CH471066 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0005484 GO:GO:0048280 SUPFAM:SSF47661
EMBL:AL158212 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
EMBL:AK303646 EMBL:AL139120 EMBL:AC022018 EMBL:BC017052
IPI:IPI00059472 IPI:IPI00852968 RefSeq:NP_660207.2
UniGene:Hs.194554 ProteinModelPortal:Q96AJ9 SMR:Q96AJ9
IntAct:Q96AJ9 MINT:MINT-3050814 STRING:Q96AJ9 PhosphoSite:Q96AJ9
DMDM:29337113 PaxDb:Q96AJ9 PeptideAtlas:Q96AJ9 PRIDE:Q96AJ9
DNASU:143187 Ensembl:ENST00000393077 Ensembl:ENST00000432306
GeneID:143187 KEGG:hsa:143187 UCSC:uc001kzy.3 CTD:143187
GeneCards:GC10P114197 H-InvDB:HIX0023094 HGNC:HGNC:17792 MIM:614316
neXtProt:NX_Q96AJ9 PharmGKB:PA134928049 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV GenomeRNAi:143187 NextBio:84666
ArrayExpress:Q96AJ9 Bgee:Q96AJ9 CleanEx:HS_VTI1A
Genevestigator:Q96AJ9 GermOnline:ENSG00000151532 Uniprot:Q96AJ9
Length = 217
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 39 NINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRHS 98
N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R R
Sbjct: 109 NSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLR 168
Query: 99 HTDFINLACGSMI 111
TD NL S I
Sbjct: 169 ETD-ANLGKSSRI 180
>UNIPROTKB|J9NRK3 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 KO:K08493 CTD:143187 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:AAEX03015533
RefSeq:XP_003433671.1 Ensembl:ENSCAFT00000050009 GeneID:100685447
KEGG:cfa:100685447 Uniprot:J9NRK3
Length = 217
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 39 NINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRHS 98
N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R R
Sbjct: 109 NSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLR 168
Query: 99 HTDFINLACGSMI 111
TD NL S +
Sbjct: 169 ETD-ANLGKSSRV 180
>RGD|621490 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with t-SNAREs
1A" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IDA] [GO:0008021
"synaptic vesicle" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0030672 "synaptic
vesicle membrane" evidence=IEA] [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO;ISS] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IDA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 RGD:621490 GO:GO:0016021 GO:GO:0006886
GO:GO:0000139 GO:GO:0030054 GO:GO:0043025 GO:GO:0008021
GO:GO:0030672 GO:GO:0006888 GO:GO:0031201 GO:GO:0042147
GO:GO:0048280 SUPFAM:SSF47661 PDB:2NPS PDBsum:2NPS eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
EMBL:AF262222 EMBL:AF262221 IPI:IPI00199945 IPI:IPI00324090
RefSeq:NP_075589.1 UniGene:Rn.154408 ProteinModelPortal:Q9JI51
SMR:Q9JI51 MINT:MINT-5225883 STRING:Q9JI51 PRIDE:Q9JI51
GeneID:65277 KEGG:rno:65277 UCSC:RGD:621490
EvolutionaryTrace:Q9JI51 NextBio:614244 ArrayExpress:Q9JI51
Genevestigator:Q9JI51 Uniprot:Q9JI51
Length = 224
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 34 SENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRT 93
SEN E+ LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR
Sbjct: 111 SENQLIKLREERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRA 170
Query: 94 RTRHSHTDFINLACGSMI 111
R R TD NL S I
Sbjct: 171 RERLRETD-ANLGKSSRI 187
>MGI|MGI:1855699 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with
t-SNAREs 1A" species:10090 "Mus musculus" [GO:0005484 "SNAP
receptor activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=ISO] [GO:0031201 "SNARE complex" evidence=ISO] [GO:0042147
"retrograde transport, endosome to Golgi" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0048280 "vesicle fusion with
Golgi apparatus" evidence=ISO] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855699 GO:GO:0016021 GO:GO:0006886 GO:GO:0000139
GO:GO:0043025 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0048280 SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV EMBL:AF035823 EMBL:AF035209
EMBL:AK004751 EMBL:AK028646 EMBL:BC019386 IPI:IPI00131540
RefSeq:NP_058558.1 UniGene:Mm.258637 UniGene:Mm.451214 PDB:1VCS
PDBsum:1VCS ProteinModelPortal:O89116 SMR:O89116 IntAct:O89116
STRING:O89116 PhosphoSite:O89116 PaxDb:O89116 PRIDE:O89116
Ensembl:ENSMUST00000095950 GeneID:53611 KEGG:mmu:53611
UCSC:uc008hxx.1 GeneTree:ENSGT00530000063466
EvolutionaryTrace:O89116 NextBio:310323 Bgee:O89116
Genevestigator:O89116 GermOnline:ENSMUSG00000024983 Uniprot:O89116
Length = 217
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 39 NINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRHS 98
N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R R
Sbjct: 109 NSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLR 168
Query: 99 HTDFINLACGSMI 111
D NL S I
Sbjct: 169 DAD-ANLGKSSRI 180
>UNIPROTKB|E1BUX5 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490
OMA:MMSKLRT EMBL:AADN02003184 IPI:IPI00572560 RefSeq:XP_421192.1
Ensembl:ENSGALT00000015509 GeneID:423273 KEGG:gga:423273
NextBio:20825766 Uniprot:E1BUX5
Length = 232
Score = 134 (52.2 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 34 SENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQ 91
+E STN+ QSQR LL +E + R + +E +RIA ET++I TD++++L QRE L+
Sbjct: 119 NEQSTNL---QSQRVLLLQGTESLNRASQSIERSHRIAAETDQIGTDIIEELGEQREQLE 175
Query: 92 RTRTRHSHT 100
RT++R +T
Sbjct: 176 RTKSRLVNT 184
>SGD|S000004810 [details] [associations]
symbol:VTI1 "Protein involved in cis-Golgi membrane traffic"
species:4932 "Saccharomyces cerevisiae" [GO:0005484 "SNAP receptor
activity" evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IMP] [GO:0031201 "SNARE
complex" evidence=IPI] [GO:0030173 "integral to Golgi membrane"
evidence=IDA] [GO:0006906 "vesicle fusion" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 SGD:S000004810 GO:GO:0006886 GO:GO:0031902
GO:GO:0030173 EMBL:BK006946 GO:GO:0006891 GO:GO:0006896
GO:GO:0031201 GO:GO:0005484 GO:GO:0006906 GO:GO:0042144 EMBL:Z47815
PDB:3ONL PDBsum:3ONL SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 GeneTree:ENSGT00530000063466
OrthoDB:EOG44F9KK EMBL:AF006074 PIR:S50926 RefSeq:NP_013924.1
PDB:3ONJ PDBsum:3ONJ ProteinModelPortal:Q04338 SMR:Q04338
DIP:DIP-2145N IntAct:Q04338 MINT:MINT-545063 STRING:Q04338
PaxDb:Q04338 PeptideAtlas:Q04338 EnsemblFungi:YMR197C GeneID:855237
KEGG:sce:YMR197C OMA:MIRMAND NextBio:978783 Genevestigator:Q04338
GermOnline:YMR197C Uniprot:Q04338
Length = 217
Score = 127 (49.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 36 NSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTR 94
N++NI+++Q Q+LL ++++G L+ RIA ETE I + ++ DL SQRETL+ R
Sbjct: 108 NASNIDDDQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENAR 166
>MGI|MGI:1855688 [details] [associations]
symbol:Vti1b "vesicle transport through interaction with
t-SNAREs 1B" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855688 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF47661 PDB:1GL2 PDBsum:1GL2
HOGENOM:HOG000116573 eggNOG:NOG291765 HOVERGEN:HBG058837
OrthoDB:EOG4M399K ChiTaRS:VTI1B EMBL:AF035208 IPI:IPI00130115
UniGene:Mm.265929 PDB:2QYW PDBsum:2QYW ProteinModelPortal:O88384
SMR:O88384 DIP:DIP-32212N IntAct:O88384 STRING:O88384
PhosphoSite:O88384 PaxDb:O88384 PRIDE:O88384 InParanoid:O88384
EvolutionaryTrace:O88384 Genevestigator:O88384
GermOnline:ENSMUSG00000021124 Uniprot:O88384
Length = 232
Score = 127 (49.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL +E + R + +E +RIA ET++I T+++++L QR+
Sbjct: 115 YTLENE-HLNRLQSQRALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHTD 101
L+RT++R +T+
Sbjct: 174 LERTKSRLVNTN 185
>RGD|2323682 [details] [associations]
symbol:LOC100359512 "vesicle transport through interaction with
t-SNAREs 1B-like" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
RGD:2323682 GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00948301
Ensembl:ENSRNOT00000015814 ArrayExpress:F1LNC4 Uniprot:F1LNC4
Length = 231
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+
Sbjct: 114 YTLENE-HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 172
Query: 90 LQRTRTRHSHTD 101
L+RT++R +T+
Sbjct: 173 LERTKSRLVNTN 184
>RGD|1560475 [details] [associations]
symbol:RGD1560475 "similar to vesicle transport through
interaction with t-SNAREs 1B homolog" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YTLENE-HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHTD 101
L+RT++R +T+
Sbjct: 174 LERTKSRLVNTN 185
>UNIPROTKB|P58200 [details] [associations]
symbol:Vti1b "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
RGD:1560475 GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YTLENE-HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHTD 101
L+RT++R +T+
Sbjct: 174 LERTKSRLVNTN 185
>ZFIN|ZDB-GENE-040426-1148 [details] [associations]
symbol:vti1b "vesicle transport through
interaction with t-SNAREs homolog 1B (yeast)" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 ZFIN:ZDB-GENE-040426-1148 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661 HOGENOM:HOG000116573
KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490 HOVERGEN:HBG058837
OrthoDB:EOG4M399K OMA:MMSKLRT EMBL:BX470227 EMBL:BC055131
IPI:IPI00498607 RefSeq:NP_957330.1 UniGene:Dr.82463 SMR:Q7SY45
STRING:Q7SY45 Ensembl:ENSDART00000057379 GeneID:394011
KEGG:dre:394011 InParanoid:Q7SY45 NextBio:20814976 Uniprot:Q7SY45
Length = 225
Score = 122 (48.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y S+N + + QSQR L+ +E + K +E RIA ET++I TD++++L QRE
Sbjct: 109 YASQNDQSTHL-QSQRALLIQGTESLNNASKSIERSQRIAAETDQIGTDIIEELGEQREQ 167
Query: 90 LQRTRTRHSHT 100
L RTR R +T
Sbjct: 168 LDRTRDRLVNT 178
>UNIPROTKB|Q9UEU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0006904
"vesicle docking involved in exocytosis" evidence=TAS] [GO:0006944
"cellular membrane fusion" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0008283 GO:GO:0012505
GO:GO:0006944 GO:GO:0031201 GO:GO:0006904 PDB:2V8S PDBsum:2V8S
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 CTD:10490
eggNOG:NOG291765 HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AF035824
EMBL:AF060902 EMBL:CR456757 EMBL:CR542095 EMBL:BT019348
EMBL:BC003142 IPI:IPI00063784 IPI:IPI00386818 RefSeq:NP_006361.1
UniGene:Hs.741177 ProteinModelPortal:Q9UEU0 SMR:Q9UEU0
IntAct:Q9UEU0 MINT:MINT-1429590 STRING:Q9UEU0 PhosphoSite:Q9UEU0
DMDM:126302613 PaxDb:Q9UEU0 PRIDE:Q9UEU0 DNASU:10490
Ensembl:ENST00000554659 GeneID:10490 KEGG:hsa:10490 UCSC:uc001xjt.3
GeneCards:GC14M068117 HGNC:HGNC:17793 MIM:603207 neXtProt:NX_Q9UEU0
PharmGKB:PA134861090 InParanoid:Q9UEU0 OMA:MMSKLRT PhylomeDB:Q9UEU0
ChiTaRS:VTI1B EvolutionaryTrace:Q9UEU0 GenomeRNAi:10490
NextBio:39804 ArrayExpress:Q9UEU0 Bgee:Q9UEU0 Genevestigator:Q9UEU0
GermOnline:ENSG00000100568 Uniprot:Q9UEU0
Length = 232
Score = 121 (47.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YAVENE-HMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHT 100
L+RT++R +T
Sbjct: 174 LERTKSRLVNT 184
>ASPGD|ASPL0000044157 [details] [associations]
symbol:AN1973 species:162425 "Emericella nidulans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0030173 "integral to
Golgi membrane" evidence=IEA] [GO:0000324 "fungal-type vacuole"
evidence=IEA] [GO:0031201 "SNARE complex" evidence=IEA] [GO:0030428
"cell septum" evidence=IEA] [GO:0005484 "SNAP receptor activity"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IEA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 GO:GO:0006886 GO:GO:0016192
EMBL:BN001307 GO:GO:0031201 GO:GO:0042144 SUPFAM:SSF47661
HOGENOM:HOG000116573 OMA:QYCELST EnsemblFungi:CADANIAT00008633
Uniprot:C8VL45
Length = 224
Score = 120 (47.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 33 FSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQR 92
++++ + + EQ Q+LL +E +ER+ L RIA+ETE I +VL DL QRET+
Sbjct: 112 YTDDPQDAHLEQRQQLLSGTERLERSSARLRESQRIALETEGIGANVLADLHQQRETITH 171
Query: 93 T 93
T
Sbjct: 172 T 172
>WB|WBGene00013302 [details] [associations]
symbol:vti-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0006886
GO:GO:0016020 GO:GO:0016192 EMBL:Z99281 GO:GO:0005622
SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
GeneTree:ENSGT00530000063466 PIR:T27217 RefSeq:NP_502781.1
ProteinModelPortal:O18230 SMR:O18230 STRING:O18230 PaxDb:O18230
EnsemblMetazoa:Y57G11C.4 GeneID:178397 KEGG:cel:CELE_Y57G11C.4
UCSC:Y57G11C.4 CTD:178397 WormBase:Y57G11C.4 InParanoid:O18230
OMA:FMFLYIV NextBio:900962 Uniprot:O18230
Length = 224
Score = 120 (47.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 44 QSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTR--HSHTD 101
Q +L+ ++ +ER+ + ++ +RIA+ETE+I ++L +L SQRET+ R+R R S+ D
Sbjct: 124 QEDQLIANTQRLERSTRKVQDAHRIAVETEQIGAEMLSNLASQRETIGRSRDRLRQSNAD 183
Query: 102 F--INLACGSMICQTV 115
N SMI + +
Sbjct: 184 LGRANKTLSSMIRRAI 199
>UNIPROTKB|F1N1Z0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00708043
UniGene:Bt.2175 OMA:MMSKLRT EMBL:DAAA02029474
Ensembl:ENSBTAT00000002532 Uniprot:F1N1Z0
Length = 232
Score = 118 (46.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL ++ + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YAVENE-HMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHT 100
L+RT++R +T
Sbjct: 174 LERTKSRLVNT 184
>UNIPROTKB|Q2KIU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0006886 GO:GO:0016192 GO:GO:0012505 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 EMBL:BC112511
IPI:IPI00708043 RefSeq:NP_001073115.1 UniGene:Bt.2175
ProteinModelPortal:Q2KIU0 SMR:Q2KIU0 STRING:Q2KIU0 PRIDE:Q2KIU0
GeneID:780809 KEGG:bta:780809 CTD:10490 eggNOG:NOG291765
HOVERGEN:HBG058837 InParanoid:Q2KIU0 OrthoDB:EOG4M399K
NextBio:20924499 Uniprot:Q2KIU0
Length = 232
Score = 118 (46.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++N QSQR LL ++ + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YAVENE-HMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 173
Query: 90 LQRTRTRHSHT 100
L+RT++R +T
Sbjct: 174 LERTKSRLVNT 184
>UNIPROTKB|F1SA25 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0005794
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 OMA:MMSKLRT EMBL:CT868701
Ensembl:ENSSSCT00000002556 Uniprot:F1SA25
Length = 232
Score = 114 (45.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 23/70 (32%), Positives = 46/70 (65%)
Query: 33 FSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETL 90
++ ++N QSQR LL ++ + R + +E +RIA ET++I ++++++L QR+ L
Sbjct: 115 YAVEDEHMNRLQSQRVLLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQL 174
Query: 91 QRTRTRHSHT 100
+RT++R +T
Sbjct: 175 ERTKSRLVNT 184
>UNIPROTKB|J9NYA0 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 OMA:MMSKLRT
EMBL:AAEX03015851 Ensembl:ENSCAFT00000012309 Uniprot:J9NYA0
Length = 232
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 32 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 89
Y EN ++ QSQR LL ++ + R + +E +RIA ET++I ++++++L Q +
Sbjct: 115 YAVENE-HMTRLQSQRALLLQGTDSLNRATRSIERSHRIATETDQIGSEIIEELGEQCDQ 173
Query: 90 LQRTRTRHSHT 100
L+RT++R +T
Sbjct: 174 LERTKSRLVNT 184
>UNIPROTKB|G4NC77 [details] [associations]
symbol:MGG_01124 "Vesicle transport V-SNARE protein vti1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 EMBL:CM001235 GO:GO:0005622 SUPFAM:SSF47661 KO:K08493
RefSeq:XP_003717810.1 ProteinModelPortal:G4NC77
EnsemblFungi:MGG_01124T0 GeneID:2674406 KEGG:mgr:MGG_01124
Uniprot:G4NC77
Length = 233
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 36 NSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRT 93
+++++ EQ ++LL ++ ++R+ + L+ + +A+ETE I L+DL QR +Q T
Sbjct: 124 SASDVQLEQREQLLRGTDRLDRSSRRLKDSHALALETEAIGASTLRDLAHQRSQIQHT 181
>UNIPROTKB|F1S5L0 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0005794 GO:GO:0006886
GO:GO:0016020 GO:GO:0042147 SUPFAM:SSF47661 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:CU468870
Ensembl:ENSSSCT00000011630 Uniprot:F1S5L0
Length = 152
Score = 95 (38.5 bits), Expect = 0.00039, P = 0.00039
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 39 NINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEK 74
N +E Q LLD +E +ER+ + LE GY+IA+ET K
Sbjct: 109 NSSENQRAHLLDNTERLERSSRRLEAGYQIAVETGK 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.45 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 593 (63 KB)
Total size of DFA: 150 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.44u 0.08s 18.52t Elapsed: 00:00:11
Total cpu time: 18.44u 0.08s 18.52t Elapsed: 00:00:11
Start: Thu Aug 15 12:14:07 2013 End: Thu Aug 15 12:14:18 2013