Query psy11022
Match_columns 492
No_of_seqs 304 out of 3199
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 16:10:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1E-44 3.5E-49 372.8 16.4 282 35-317 27-488 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 8.9E-42 3E-46 350.3 25.4 277 35-315 35-476 (500)
3 3uon_A Human M2 muscarinic ace 100.0 3.4E-41 1.2E-45 343.0 23.6 276 37-315 20-457 (467)
4 2ks9_A Substance-P receptor; w 100.0 3.1E-40 1E-44 325.0 29.2 280 35-319 27-325 (364)
5 1u19_A Rhodopsin; G protein-co 100.0 1.1E-40 3.8E-45 326.0 24.5 280 31-315 29-323 (349)
6 3odu_A C-X-C chemokine recepto 100.0 1E-40 3.4E-45 342.8 16.2 282 34-320 42-497 (502)
7 3rze_A Histamine H1 receptor, 100.0 2.7E-40 9.3E-45 335.0 18.6 276 40-318 8-445 (452)
8 3v2y_A Sphingosine 1-phosphate 100.0 1.2E-39 4E-44 336.0 23.4 273 40-317 63-494 (520)
9 3pbl_A D(3) dopamine receptor, 100.0 6.9E-40 2.4E-44 334.7 21.5 273 38-315 36-471 (481)
10 3vw7_A Proteinase-activated re 100.0 2.8E-40 9.7E-45 337.9 15.0 277 36-315 16-464 (484)
11 3eml_A Human adenosine A2A rec 100.0 3.4E-40 1.2E-44 337.5 15.5 279 37-320 18-471 (488)
12 4dkl_A MU-type opioid receptor 100.0 1.3E-39 4.3E-44 331.1 18.9 276 35-314 12-454 (464)
13 4eiy_A Adenosine receptor A2A/ 100.0 2.4E-40 8.4E-45 334.8 12.4 282 34-320 25-430 (447)
14 4amj_A Beta-1 adrenergic recep 100.0 4.9E-39 1.7E-43 309.5 19.3 274 38-315 9-300 (315)
15 4ea3_A Fusion protein of nocic 100.0 9.4E-39 3.2E-43 322.0 20.4 274 36-315 121-409 (434)
16 2z73_A Rhodopsin; visual pigme 100.0 9.1E-39 3.1E-43 323.6 18.7 278 36-316 30-332 (448)
17 2lnl_A C-X-C chemokine recepto 100.0 1.3E-37 4.3E-42 297.4 23.3 264 36-315 7-293 (296)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1.3E-37 4.5E-42 320.5 21.1 275 37-315 179-490 (514)
19 4grv_A Neurotensin receptor ty 99.7 1.1E-17 3.7E-22 171.5 5.3 110 373-483 65-174 (510)
20 2rh1_A Beta-2-adrenergic recep 99.6 2E-16 6.9E-21 161.8 7.9 107 373-482 70-176 (500)
21 3rze_A Histamine H1 receptor, 99.6 2.8E-16 9.7E-21 158.4 7.7 112 373-487 38-149 (452)
22 4amj_A Beta-1 adrenergic recep 99.6 1.8E-16 6E-21 151.7 5.6 108 373-483 41-148 (315)
23 3uon_A Human M2 muscarinic ace 99.6 5.2E-16 1.8E-20 157.1 8.2 108 373-483 53-160 (467)
24 3vw7_A Proteinase-activated re 99.6 7E-16 2.4E-20 157.0 8.2 109 373-484 50-158 (484)
25 2lnl_A C-X-C chemokine recepto 99.6 1.4E-15 4.8E-20 144.3 8.5 105 373-483 41-145 (296)
26 4dkl_A MU-type opioid receptor 99.6 5.6E-16 1.9E-20 156.7 6.1 108 373-484 47-154 (464)
27 1u19_A Rhodopsin; G protein-co 99.6 1.6E-15 5.4E-20 147.4 8.2 108 372-483 67-174 (349)
28 2ks9_A Substance-P receptor; w 99.6 1.9E-15 6.4E-20 147.9 8.5 108 373-485 62-169 (364)
29 3v2y_A Sphingosine 1-phosphate 99.6 1.3E-15 4.5E-20 156.5 6.7 106 373-483 93-198 (520)
30 3pbl_A D(3) dopamine receptor, 99.6 1.8E-15 6.1E-20 153.8 6.9 112 372-485 67-181 (481)
31 4ea3_A Fusion protein of nocic 99.6 2.7E-15 9.2E-20 150.5 7.8 111 371-485 153-263 (434)
32 3eml_A Human adenosine A2A rec 99.6 3.2E-15 1.1E-19 152.1 7.7 106 373-483 51-156 (488)
33 3sn6_R Lysozyme, beta-2 adrene 99.6 1.8E-15 6E-20 155.3 5.8 107 373-482 212-318 (514)
34 3odu_A C-X-C chemokine recepto 99.5 2E-15 6.9E-20 154.3 5.5 111 371-486 76-186 (502)
35 4eiy_A Adenosine receptor A2A/ 99.5 3.1E-15 1E-19 150.5 5.8 106 373-483 61-166 (447)
36 2z73_A Rhodopsin; visual pigme 99.5 9.1E-15 3.1E-19 147.3 8.8 108 373-483 64-172 (448)
37 1hll_A Alpha-2A adrenergic rec 98.6 3.7E-09 1.2E-13 63.0 -1.2 30 432-461 2-31 (32)
38 2koe_A Human cannabinoid recep 98.5 6.6E-08 2.3E-12 60.8 2.4 35 281-315 3-37 (40)
39 1hll_A Alpha-2A adrenergic rec 98.4 9.2E-08 3.1E-12 56.7 1.4 30 129-158 2-31 (32)
40 2ki9_A Cannabinoid receptor 2; 97.3 2.8E-05 9.4E-10 46.0 -0.4 30 243-272 1-30 (33)
41 2lot_A Apelin receptor; membra 94.7 0.0015 5.2E-08 44.5 -2.7 30 42-71 30-59 (64)
42 2ket_A Cathelicidin-6; antimic 37.1 17 0.00057 18.7 1.3 12 304-315 4-15 (27)
43 2rdd_B UPF0092 membrane protei 22.8 55 0.0019 19.1 2.1 23 208-230 6-29 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-44 Score=372.76 Aligned_cols=282 Identities=21% Similarity=0.292 Sum_probs=221.7
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccc---cchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccc
Q psy11022 35 PYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLR---RRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPI 111 (492)
Q Consensus 35 ~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr---~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~ 111 (492)
.+.+..++..+++.+++++|++||+++++++.++|++| +++|+|++|||++|++.+++.+|+.+....... ..|.+
T Consensus 27 ~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~-~~w~~ 105 (510)
T 4grv_A 27 TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVH-HPWAF 105 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC-SSCSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEh
Confidence 34566788889999999999999999999998877655 678999999999999999899999887655432 25999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc--------
Q psy11022 112 KEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV-------- 183 (492)
Q Consensus 112 ~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~-------- 183 (492)
|+.+|++..++...+..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++...
T Consensus 106 g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~ 185 (510)
T 4grv_A 106 GDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADG 185 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999886421
Q ss_pred ---ccccccccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------------------------
Q psy11022 184 ---GPDYCSKKVSY--MELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQN--------------------------- 231 (492)
Q Consensus 184 ---~~~~C~~~~~~--~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~--------------------------- 231 (492)
....|...++. ...+..+..++.+++|+++++++|.+|+++++++.+.
T Consensus 186 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (510)
T 4grv_A 186 THPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 265 (510)
T ss_dssp CCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETT
T ss_pred CCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccc
Confidence 11235544432 3455666667889999999999999999999753210
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 232 -------------------------------------------------------------------------------- 231 (492)
Q Consensus 232 -------------------------------------------------------------------------------- 231 (492)
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 345 (510)
T 4grv_A 266 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 345 (510)
T ss_dssp EECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCC
Confidence
Q ss_pred -----------------------------------------------CCCCCCcccchhhHHHHHHHHHHHHHHHHhHhH
Q psy11022 232 -----------------------------------------------PSFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPF 264 (492)
Q Consensus 232 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~ 264 (492)
.+.+..+..++|+|++|++++++++|++||+|+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf 425 (510)
T 4grv_A 346 VAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPY 425 (510)
T ss_dssp HTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111223567899999999999999999999
Q ss_pred HHHHHHHhccCCc----------chHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhccc
Q psy11022 265 CIVMSVASFRHQI----------TPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYC 317 (492)
Q Consensus 265 ~i~~~~~~~~~~~----------~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~ 317 (492)
.+..++..+.+.. .....+..||.|+||++||+||+++|++||++++++++++
T Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~ 488 (510)
T 4grv_A 426 HVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACL 488 (510)
T ss_dssp HHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC--------
T ss_pred HHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhc
Confidence 9999887762211 1234456789999999999999999999999999999643
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=8.9e-42 Score=350.32 Aligned_cols=277 Identities=20% Similarity=0.308 Sum_probs=230.7
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccc
Q psy11022 35 PYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEI 114 (492)
Q Consensus 35 ~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~ 114 (492)
..+.......+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|+.+.....+ .|.+|+.
T Consensus 35 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~---~w~~~~~ 111 (500)
T 2rh1_A 35 RDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMK---MWTFGNF 111 (500)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT---SCCSHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCcc
Confidence 3444567788899999999999999999999999999999999999999999999988999988877765 4899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhc-c-----ccccc
Q psy11022 115 MCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYK-V-----GPDYC 188 (492)
Q Consensus 115 ~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~-~-----~~~~C 188 (492)
.|++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|+++++++++++... . +...|
T Consensus 112 ~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c 191 (500)
T 2rh1_A 112 WCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINC 191 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCccee
Confidence 99999999999999999999999999999999999999999999999999999999999986444321 1 11234
Q ss_pred cccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------------C--CC------------
Q psy11022 189 SKKV-----SYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQN---------------P--SF------------ 234 (492)
Q Consensus 189 ~~~~-----~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~---------------~--~~------------ 234 (492)
...+ .....|.....++.+++|+++++++|.+|++.+||+.++ . ..
T Consensus 192 ~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (500)
T 2rh1_A 192 YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTK 271 (500)
T ss_dssp HHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEES
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCC
Confidence 3321 123567777777889999999999999999999886543 0 00
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 235 -------------------------------------------------------------------------------- 234 (492)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (492)
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (500)
T 2rh1_A 272 SPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFT 351 (500)
T ss_dssp CSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred cccccccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCcccccccc
Confidence
Q ss_pred -------------------------------------------CCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHH
Q psy11022 235 -------------------------------------------KPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVA 271 (492)
Q Consensus 235 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~ 271 (492)
+..+..++|+|++|++++++++|++||+|+.+..++.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~ 431 (500)
T 2rh1_A 352 NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVH 431 (500)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000123688999999999999999999999999888
Q ss_pred hcc--CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 272 SFR--HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 272 ~~~--~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
.+. ..+..+..+..|+.++||++||+||++ |++||++++++++
T Consensus 432 ~~~~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~ 476 (500)
T 2rh1_A 432 VIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC 476 (500)
T ss_dssp HHSTTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTT
T ss_pred HHcCCcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHh
Confidence 773 345566777889999999999999996 9999999999995
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=3.4e-41 Score=343.04 Aligned_cols=276 Identities=18% Similarity=0.316 Sum_probs=240.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccc
Q psy11022 37 DWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMC 116 (492)
Q Consensus 37 ~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C 116 (492)
+....+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.+++.+|..+.....+ .|.+|+..|
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~---~~~~~~~~C 96 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIG---YWPLGPVVC 96 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSS---SCCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CccCCcchH
Confidence 34567889999999999999999999999999999999999999999999999989999988877766 489999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhc--------cccccc
Q psy11022 117 HVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYK--------VGPDYC 188 (492)
Q Consensus 117 ~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~--------~~~~~C 188 (492)
++..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++.. .+...|
T Consensus 97 ~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C 176 (467)
T 3uon_A 97 DLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGEC 176 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999887641 234568
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q psy11022 189 SKKVSYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQN------------------------------------- 231 (492)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~------------------------------------- 231 (492)
...+.....+.....++.+++|+++++++|.+|++.++++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (467)
T 3uon_A 177 YIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLN 256 (467)
T ss_dssp CCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHH
T ss_pred eeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCccc
Confidence 8877666778888888999999999999999999999876431
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 232 -------------------------------------------------------------------------------- 231 (492)
Q Consensus 232 -------------------------------------------------------------------------------- 231 (492)
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (467)
T 3uon_A 257 AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 336 (467)
T ss_dssp HHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHH
T ss_pred ccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccch
Confidence
Q ss_pred -----------------------------------CCCCCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhccC-
Q psy11022 232 -----------------------------------PSFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVASFRH- 275 (492)
Q Consensus 232 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~- 275 (492)
......+..++|+|+++++++++++|++||+|+.+..++..+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~ 416 (467)
T 3uon_A 337 LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP 416 (467)
T ss_dssp HHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST
T ss_pred hhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 00011112346789999999999999999999999999887733
Q ss_pred -CcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 276 -QITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 276 -~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
.......+..++.++|+++||+||+++|++||++++++++
T Consensus 417 ~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 457 (467)
T 3uon_A 417 CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM 457 (467)
T ss_dssp TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHh
Confidence 4566677788999999999999999999999999999995
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=3.1e-40 Score=325.03 Aligned_cols=280 Identities=17% Similarity=0.335 Sum_probs=231.1
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccc
Q psy11022 35 PYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEI 114 (492)
Q Consensus 35 ~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~ 114 (492)
.+++......+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+++.+|..+.....+ .|.+|+.
T Consensus 27 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~---~~~~~~~ 103 (364)
T 2ks9_A 27 QPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN---EWYYGLF 103 (364)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT---SCSSCHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CccchHH
Confidence 3445555668899999999999999999999999999999999999999999999988899887766654 4889999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc-----cccccc
Q psy11022 115 MCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV-----GPDYCS 189 (492)
Q Consensus 115 ~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~-----~~~~C~ 189 (492)
.|++..++...+..+|.+++++||+|||+||++|++|+ .+++++...++++|+++++.++|...+.. +...|.
T Consensus 104 ~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~ 181 (364)
T 2ks9_A 104 YCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCM 181 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBC
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEe
Confidence 99999999999999999999999999999999998875 58888899999999999999998775432 234587
Q ss_pred cccccc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CCcccchhhHHHHHHHHHHHHHHHHh
Q psy11022 190 KKVSYM------ELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSFK--PPVIFGWDYSLMLTNMYSYIMFIVLW 261 (492)
Q Consensus 190 ~~~~~~------~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~i~~ 261 (492)
..++.. ..|.....++.+++|++++.++|.+|.+.++|++++.+.. .+++.++++|++++++.++++|++||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~ 261 (364)
T 2ks9_A 182 IEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICW 261 (364)
T ss_dssp CCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHH
Confidence 664321 3566666778899999999999999999998765433222 22334567899999999999999999
Q ss_pred HhHHHHHHHHhccCC------cchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhccccc
Q psy11022 262 IPFCIVMSVASFRHQ------ITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYCCC 319 (492)
Q Consensus 262 ~P~~i~~~~~~~~~~------~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~~~ 319 (492)
+|+.+..++...... .........++.++|+++||+||++++++||++++++++++++
T Consensus 262 ~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 262 LPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp HHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 999998887665221 2334556678899999999999999999999999999975443
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.1e-40 Score=326.01 Aligned_cols=280 Identities=19% Similarity=0.278 Sum_probs=234.3
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccc
Q psy11022 31 PSTLPYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEP 110 (492)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~ 110 (492)
+....+++...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|..+.....+ .|.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~---~~~ 105 (349)
T 1u19_A 29 QYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHG---YFV 105 (349)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT---SCT
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcC---eee
Confidence 33445667778888999999999999999999999999999999999999999999999988899888776655 388
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc------c
Q psy11022 111 IKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV------G 184 (492)
Q Consensus 111 ~~~~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~------~ 184 (492)
+|+..|++..++...+..+|.+++++||+|||+||++|++|++ .+++++...++++|+++++.++|++.... .
T Consensus 106 ~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
T 1u19_A 106 FGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGM 184 (349)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETT
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCC
Confidence 9999999999999999999999999999999999999998876 78999999999999999999999876421 2
Q ss_pred ccccccccc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchhhHHHHHHHHHHHHHH
Q psy11022 185 PDYCSKKVS------YMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSFKPPVIFGWDYSLMLTNMYSYIMFI 258 (492)
Q Consensus 185 ~~~C~~~~~------~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 258 (492)
...|...+. ....+.....++.+++|++++.++|.+|++++||++++.+ +..++.++++|.+++++.++++|+
T Consensus 185 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~f~ 263 (349)
T 1u19_A 185 QCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ-ESATTQKAEKEVTRMVIIMVIAFL 263 (349)
T ss_dssp TTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC-SSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-cchhhHHHHHHHHHHHHHHHHHHH
Confidence 335765532 2345556666778899999999999999999988755332 334455678899999999999999
Q ss_pred HHhHhHHHHHHHHhcc---CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 259 VLWIPFCIVMSVASFR---HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 259 i~~~P~~i~~~~~~~~---~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
+||+|+.+..++.... ........+..++.++|+++||+||++++++||++++++++
T Consensus 264 i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~ 323 (349)
T 1u19_A 264 ICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC 323 (349)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhc
Confidence 9999999887776552 22334556667889999999999999999999999999984
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1e-40 Score=342.83 Aligned_cols=282 Identities=20% Similarity=0.277 Sum_probs=234.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccccc
Q psy11022 34 LPYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKE 113 (492)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~ 113 (492)
...+....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+ +.+|..+.....+ |.+|+
T Consensus 42 ~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~~----~~~~~ 116 (502)
T 3odu_A 42 ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVAN----WYFGN 116 (502)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHTC----CCSHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC----CcCCc
Confidence 344666888999999999999999999999999999999999999999999999996 7889888776653 89999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc-----ccccc
Q psy11022 114 IMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV-----GPDYC 188 (492)
Q Consensus 114 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~-----~~~~C 188 (492)
..|++..++..++..++++++++||+|||+||++|++|+..++++++..+++++|++++++++|++++.. +...|
T Consensus 117 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C 196 (502)
T 3odu_A 117 FLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYIC 196 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999887532 33457
Q ss_pred cccccc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------CC----------------------
Q psy11022 189 SKKVSY---MELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPS--------FK---------------------- 235 (492)
Q Consensus 189 ~~~~~~---~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~--------~~---------------------- 235 (492)
...++. ...+.....++.+++|+++++++|.+|++.++|++++.+ .+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
T 3odu_A 197 DRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS 276 (502)
T ss_dssp EECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECS
T ss_pred eecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcC
Confidence 755443 233455556788899999999999999999998644310 00
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 236 -------------------------------------------------------------------------------- 235 (492)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (492)
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
T 3odu_A 277 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 356 (502)
T ss_dssp SCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred ccccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCcc
Confidence
Q ss_pred --------------------------------------------CCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHH
Q psy11022 236 --------------------------------------------PPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVA 271 (492)
Q Consensus 236 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~ 271 (492)
...+.++|+|+++++++++++|++||+|+.+..++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~ 436 (502)
T 3odu_A 357 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISID 436 (502)
T ss_dssp HHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 002234578999999999999999999999988877
Q ss_pred hcc------------CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhcccccC
Q psy11022 272 SFR------------HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYCCCK 320 (492)
Q Consensus 272 ~~~------------~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~~~~ 320 (492)
.+. .....+..+..++.++|+++||+||+++|++||+++++++++++|+
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~ 497 (502)
T 3odu_A 437 SFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPL 497 (502)
T ss_dssp HHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSC
T ss_pred HHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCch
Confidence 651 1122334466789999999999999999999999999999755443
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=334.95 Aligned_cols=276 Identities=18% Similarity=0.360 Sum_probs=236.7
Q ss_pred HHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccchhh
Q psy11022 40 RVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQ 119 (492)
Q Consensus 40 ~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 119 (492)
..+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.+++.+|..+.....+ .|.+|+..|++.
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~ 84 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMS---KWSLGRPLCLFW 84 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSS---SCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CccCCchhHhHH
Confidence 45667889999999999999999999999999999999999999999999989999998887765 489999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc--------cccccccc
Q psy11022 120 WFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV--------GPDYCSKK 191 (492)
Q Consensus 120 ~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~--------~~~~C~~~ 191 (492)
.++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|.+.+.. ....|..+
T Consensus 85 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 164 (452)
T 3rze_A 85 LSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETD 164 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCC
Confidence 9999999999999999999999999999999999999999999999999999999888664321 34468777
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---------------------------------------
Q psy11022 192 VSYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNP--------------------------------------- 232 (492)
Q Consensus 192 ~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~--------------------------------------- 232 (492)
+.....+.....++.+++|+++++++|.+|++.+|+++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (452)
T 3rze_A 165 FYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAK 244 (452)
T ss_dssp CTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCccc
Confidence 66667788888889999999999999999999998753210
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 233 -------------------------------------------------------------------------------- 232 (492)
Q Consensus 233 -------------------------------------------------------------------------------- 232 (492)
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (452)
T 3rze_A 245 SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 324 (452)
T ss_dssp HHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHT
T ss_pred ccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhh
Confidence
Q ss_pred ---------------------------------CCCCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhc--cCCc
Q psy11022 233 ---------------------------------SFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVASF--RHQI 277 (492)
Q Consensus 233 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~--~~~~ 277 (492)
..+...+.++|+|+++++++++++|++||+|+.+..++..+ ....
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~ 404 (452)
T 3rze_A 325 KRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCN 404 (452)
T ss_dssp TCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC
T ss_pred cCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccccc
Confidence 00011234478899999999999999999999999888776 3344
Q ss_pred chHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhcccc
Q psy11022 278 TPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYCC 318 (492)
Q Consensus 278 ~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~~ 318 (492)
.....+..++.++|+++||+||+++|++||+++++++++++
T Consensus 405 ~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~ 445 (452)
T 3rze_A 405 EHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS 445 (452)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcc
Confidence 56677888999999999999999999999999999996443
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=1.2e-39 Score=335.98 Aligned_cols=273 Identities=17% Similarity=0.195 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccchhh
Q psy11022 40 RVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQ 119 (492)
Q Consensus 40 ~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~ 119 (492)
..+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+... ...|.++...|++.
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~----~~~~~~~~~~c~~~ 138 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSG----ATTYKLTPAQWFLR 138 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSG----GGGTTSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHcc----ccceeeCccccchH
Confidence 36788899999999999999999999999999999999999999999999988888776552 12478899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhc---ccccccccccccch
Q psy11022 120 WFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYK---VGPDYCSKKVSYME 196 (492)
Q Consensus 120 ~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~---~~~~~C~~~~~~~~ 196 (492)
.++..++..+|++++++||+|||+||+ |++|+..++++++..+++++|++++++++|+++.. .+...|...++...
T Consensus 139 ~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 217 (520)
T 3v2y_A 139 EGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYH 217 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTTCGGGBCSSSTTBB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccccCCCcccccCCccc
Confidence 999999999999999999999999999 99999999999999999999999999998887643 24457887765444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------cCCC-----C---------------------------
Q psy11022 197 LYQGIIGSLFFFIPIIITCILYMKITYKVRLAR----------QNPS-----F--------------------------- 234 (492)
Q Consensus 197 ~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~----------~~~~-----~--------------------------- 234 (492)
.+.....++.+++|+++++++|.+|++.+++++ .+.+ .
T Consensus 218 ~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~~ 297 (520)
T 3v2y_A 218 KHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKA 297 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhhH
Confidence 445555567799999999999999999999875 0000 0
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 235 -------------------------------------------------------------------------------- 234 (492)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (492)
T Consensus 298 ~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 377 (520)
T 3v2y_A 298 IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 377 (520)
T ss_dssp HTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHHH
T ss_pred HHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhhH
Confidence
Q ss_pred ------------------------------CCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhccC----CcchH
Q psy11022 235 ------------------------------KPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVASFRH----QITPS 280 (492)
Q Consensus 235 ------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~----~~~~~ 280 (492)
...++.++++|+++++++++++|++||+|+.+..++..+.. .....
T Consensus 378 ~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~ 457 (520)
T 3v2y_A 378 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFR 457 (520)
T ss_dssp HHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTS
T ss_pred hhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHH
Confidence 00011225788999999999999999999999999877632 23344
Q ss_pred HHHHHHHHhhcccccchhhhhcChHHHHHHHHHhccc
Q psy11022 281 FYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYC 317 (492)
Q Consensus 281 ~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~ 317 (492)
..+..++.++||++||+||+++|++||++++++++++
T Consensus 458 ~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 494 (520)
T 3v2y_A 458 AEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRP 494 (520)
T ss_dssp CHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 5566789999999999999999999999999998643
No 9
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=334.74 Aligned_cols=273 Identities=21% Similarity=0.342 Sum_probs=229.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccch
Q psy11022 38 WNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCH 117 (492)
Q Consensus 38 ~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~ 117 (492)
....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+.....+. .|.++...|+
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~--~~~~~~~~C~ 113 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGG--VWNFSRICCD 113 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTS--CCCSCHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ccccCcchhh
Confidence 34567788899999999999999999999999999999999999999999999899998887666532 4889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc---ccccchhhHHhHhhHHHHHHHHHhhhhhhhc---ccccccccc
Q psy11022 118 VQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPEC---YTFFSKSHIILSVIMIWLVSILLTTLQFIYK---VGPDYCSKK 191 (492)
Q Consensus 118 ~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~---~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~---~~~~~C~~~ 191 (492)
+..++..++..++++++++||+|||+||++|++| ....+++++..+++++|++++++++|+++.. .+...|...
T Consensus 114 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~ 193 (481)
T 3pbl_A 114 VFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSIS 193 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCCSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCCCCccccc
Confidence 9999999999999999999999999999999998 5678889999999999999999999887643 233457654
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------------------------------------
Q psy11022 192 VSYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPS-------------------------------------- 233 (492)
Q Consensus 192 ~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~-------------------------------------- 233 (492)
+ ..+.....++.+++|+++++++|.+|++.+++++++..
T Consensus 194 ~---~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (481)
T 3pbl_A 194 N---PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNA 270 (481)
T ss_dssp C---HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHH
T ss_pred C---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCccccc
Confidence 3 44677777889999999999999999999998654310
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 234 -------------------------------------------------------------------------------- 233 (492)
Q Consensus 234 -------------------------------------------------------------------------------- 233 (492)
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (481)
T 3pbl_A 271 AKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRML 350 (481)
T ss_dssp HHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchh
Confidence
Q ss_pred ------------------------------------CCCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhcc---
Q psy11022 234 ------------------------------------FKPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVASFR--- 274 (492)
Q Consensus 234 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~--- 274 (492)
.+.....++|+|+++++++++++|++||+|+.+..++....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~ 430 (481)
T 3pbl_A 351 QQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTC 430 (481)
T ss_dssp HTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred ccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 00011123589999999999999999999999999988762
Q ss_pred CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 275 HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 275 ~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
........+..++.++|+++||+||+++|++||++++++++
T Consensus 431 ~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 471 (481)
T 3pbl_A 431 HVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS 471 (481)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHh
Confidence 34456667788999999999999999999999999999995
No 10
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=337.90 Aligned_cols=277 Identities=14% Similarity=0.250 Sum_probs=215.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccccccc
Q psy11022 36 YDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIM 115 (492)
Q Consensus 36 ~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 115 (492)
.+....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++ .+|..+....... .|.+|+..
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~--~~~~~~~~ 92 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGS--DWQFGSEL 92 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTS--CCCSCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC--CcccchhH
Confidence 34557788999999999999999999999999999999999999999999999984 5666655554432 48999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc-------ccccc
Q psy11022 116 CHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV-------GPDYC 188 (492)
Q Consensus 116 C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~-------~~~~C 188 (492)
|++..++..++..+|++++++||+|||+||++|++|...++++++..+++++|++++++++|+++... ....|
T Consensus 93 C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C 172 (484)
T 3vw7_A 93 CRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTC 172 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999876432 22468
Q ss_pred ccccccc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---------------CC------------
Q psy11022 189 SKKVSYM------ELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPS---------------FK------------ 235 (492)
Q Consensus 189 ~~~~~~~------~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~---------------~~------------ 235 (492)
...++.. ..+.....++.+++|+++++++|.+|++.+++++++.+ .+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~ 252 (484)
T 3vw7_A 173 HDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLT 252 (484)
T ss_dssp SSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEE
T ss_pred eccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeecccccc
Confidence 7664331 12555566788999999999999999999987653100 00
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 236 -------------------------------------------------------------------------------- 235 (492)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (492)
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 332 (484)
T 3vw7_A 253 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 332 (484)
T ss_dssp SSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccc
Confidence
Q ss_pred ---------------------------------------------CCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHH
Q psy11022 236 ---------------------------------------------PPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSV 270 (492)
Q Consensus 236 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~ 270 (492)
...+.++++|++|++++++++|++||+|+.+..++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~ 412 (484)
T 3vw7_A 333 TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIA 412 (484)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred hhhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 00133456889999999999999999999999988
Q ss_pred Hhcc---CCc----chHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 271 ASFR---HQI----TPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 271 ~~~~---~~~----~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
..+. ... .....+..++.++|+++||+||+++|++||++++++++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~ 464 (484)
T 3vw7_A 413 HYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILC 464 (484)
T ss_dssp HHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC---------
T ss_pred HHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHh
Confidence 7542 111 23445677899999999999999999999999999985
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3.4e-40 Score=337.51 Aligned_cols=279 Identities=15% Similarity=0.220 Sum_probs=230.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccc
Q psy11022 37 DWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMC 116 (492)
Q Consensus 37 ~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C 116 (492)
.....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+.... .|.++...|
T Consensus 18 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~-----~~~~~~~~C 92 (488)
T 3eml_A 18 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST-----GFCAACHGC 92 (488)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT-----CCEECHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccccchHH
Confidence 334668889999999999999999999999999999999999999999999999899998776332 378888999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc----------ccc
Q psy11022 117 HVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV----------GPD 186 (492)
Q Consensus 117 ~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~----------~~~ 186 (492)
++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++... ...
T Consensus 93 ~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
T 3eml_A 93 LFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQ 172 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988876321 123
Q ss_pred ccccccc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC------------------------
Q psy11022 187 YCSKKVS--------YMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSF------------------------ 234 (492)
Q Consensus 187 ~C~~~~~--------~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~------------------------ 234 (492)
.|...+. ....+.....++.+++|+++++++|.+|++.++|+.++.+.
T Consensus 173 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (488)
T 3eml_A 173 GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 252 (488)
T ss_dssp SSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETT
T ss_pred ccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceecccc
Confidence 4554321 11223344466888999999999999999999876432100
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 235 -------------------------------------------------------------------------------- 234 (492)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (492)
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (488)
T 3eml_A 253 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 332 (488)
T ss_dssp EEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHH
T ss_pred ccCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCC
Confidence
Q ss_pred -------------------------------------------------CCCcccchhhHHHHHHHHHHHHHHHHhHhHH
Q psy11022 235 -------------------------------------------------KPPVIFGWDYSLMLTNMYSYIMFIVLWIPFC 265 (492)
Q Consensus 235 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~ 265 (492)
...++.++|+|+++++++++++|++||+|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~ 412 (488)
T 3eml_A 333 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLH 412 (488)
T ss_dssp HTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0001134678999999999999999999999
Q ss_pred HHHHHHhcc----CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhcccccC
Q psy11022 266 IVMSVASFR----HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHYCCCK 320 (492)
Q Consensus 266 i~~~~~~~~----~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~~~~~ 320 (492)
++.++..+. ........+..++.++|+++||+||+++|++||+++++++++++++
T Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~ 471 (488)
T 3eml_A 413 IINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR 471 (488)
T ss_dssp HHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcccc
Confidence 998887762 3345566777889999999999999999999999999999865554
No 12
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.3e-39 Score=331.13 Aligned_cols=276 Identities=19% Similarity=0.352 Sum_probs=229.8
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccc
Q psy11022 35 PYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEI 114 (492)
Q Consensus 35 ~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~ 114 (492)
+......+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++. +|..+.....+ .|.+|+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~---~~~~~~~ 87 (464)
T 4dkl_A 12 PSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMG---TWPFGNI 87 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS---SCCSCSH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC---Ccccccc
Confidence 3445678899999999999999999999999999999999999999999999999855 88888777765 3899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc-----cccccc
Q psy11022 115 MCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV-----GPDYCS 189 (492)
Q Consensus 115 ~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~-----~~~~C~ 189 (492)
.|++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|.++... +...|.
T Consensus 88 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~ 167 (464)
T 4dkl_A 88 LCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCT 167 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999998876432 334566
Q ss_pred ccccc-----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------------------------------
Q psy11022 190 KKVSY-----MELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQN--------------------------------- 231 (492)
Q Consensus 190 ~~~~~-----~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~--------------------------------- 231 (492)
..+.. ...+.....++.+++|+++++++|.+|++++++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (464)
T 4dkl_A 168 LTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKS 247 (464)
T ss_dssp BCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESS
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCC
Confidence 55433 2335566667889999999999999999998765430
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 232 -------------------------------------------------------------------------------- 231 (492)
Q Consensus 232 -------------------------------------------------------------------------------- 231 (492)
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (464)
T 4dkl_A 248 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 327 (464)
T ss_dssp SCSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHH
T ss_pred CccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccc
Confidence
Q ss_pred ---------------------------------------CCCCCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHh
Q psy11022 232 ---------------------------------------PSFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVAS 272 (492)
Q Consensus 232 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~ 272 (492)
......++.++|+|++|++++++++|++||+|+.+..++..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~ 407 (464)
T 4dkl_A 328 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKA 407 (464)
T ss_dssp HHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 00112234466789999999999999999999999999877
Q ss_pred ccCC-----cchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHh
Q psy11022 273 FRHQ-----ITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLF 314 (492)
Q Consensus 273 ~~~~-----~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~ 314 (492)
+... ......+..++.++|+++||+||+++|++||+++++++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 408 LITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp HSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 6322 22233455679999999999999999999999999974
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=2.4e-40 Score=334.82 Aligned_cols=282 Identities=15% Similarity=0.233 Sum_probs=228.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccccc
Q psy11022 34 LPYDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKE 113 (492)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~ 113 (492)
..+.....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+.... .|..+.
T Consensus 25 ~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~-----~~~~~~ 99 (447)
T 4eiy_A 25 APPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST-----GFCAAC 99 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT-----TCEEEH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccccCc
Confidence 344556778888999999999999999999999999999999999999999999999899998776332 367788
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhccc---------
Q psy11022 114 IMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKVG--------- 184 (492)
Q Consensus 114 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~--------- 184 (492)
..|++..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++++++++|+++....
T Consensus 100 ~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~ 179 (447)
T 4eiy_A 100 HGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKN 179 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988763211
Q ss_pred -ccccccccc-------c-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---------------------
Q psy11022 185 -PDYCSKKVS-------Y-MELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSF--------------------- 234 (492)
Q Consensus 185 -~~~C~~~~~-------~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~--------------------- 234 (492)
...|...+. . ...+.....++.+++|+++++++|.+|++.+||+.++.++
T Consensus 180 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (447)
T 4eiy_A 180 HSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQV 259 (447)
T ss_dssp HHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHH
T ss_pred ccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhh
Confidence 123443321 1 1122222234567999999999999999999886332100
Q ss_pred --------------------------------------------------------------------------------
Q psy11022 235 -------------------------------------------------------------------------------- 234 (492)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (492)
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (447)
T 4eiy_A 260 KDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYL 339 (447)
T ss_dssp HHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHH
T ss_pred hccchhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccc
Confidence
Q ss_pred -CCCcccchhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhcc----CCcchHHHHHHHHHhhcccccchhhhhcChHHHHH
Q psy11022 235 -KPPVIFGWDYSLMLTNMYSYIMFIVLWIPFCIVMSVASFR----HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNA 309 (492)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~----~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~ 309 (492)
+..++.++|+|++|++++++++|++||+|+.+..++.... ........+..++.++|+++||+||+++|++||++
T Consensus 340 ~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 419 (447)
T 4eiy_A 340 ERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQT 419 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHH
Confidence 0011235678999999999999999999999998887762 33445666778999999999999999999999999
Q ss_pred HHHHhcccccC
Q psy11022 310 YINLFHYCCCK 320 (492)
Q Consensus 310 ~~~~~~~~~~~ 320 (492)
+++++++++++
T Consensus 420 ~~~~~~~~~~r 430 (447)
T 4eiy_A 420 FRKIIRSHVLR 430 (447)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHHhc
Confidence 99999766555
No 14
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=4.9e-39 Score=309.50 Aligned_cols=274 Identities=20% Similarity=0.361 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccch
Q psy11022 38 WNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCH 117 (492)
Q Consensus 38 ~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C~ 117 (492)
..+....+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++..+|..+.....+ .|.+|+..|+
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~---~~~~~~~~C~ 85 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG---TWLWGSFLCE 85 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHS---SCCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcC---CeeccccHHH
Confidence 3467788899999999999999999999999999999999999999999999989999988777665 4899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc------cccccccc
Q psy11022 118 VQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV------GPDYCSKK 191 (492)
Q Consensus 118 ~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~------~~~~C~~~ 191 (492)
+..++...+..+|.+++++||+|||+||++|++|++..+++++...++++|+++++.+.++..... +...|..+
T Consensus 86 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 165 (315)
T 4amj_A 86 LWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQD 165 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987765421 11234333
Q ss_pred c-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCc-----ccchhhHHHHHHHHHHHHHHHHh
Q psy11022 192 V-----SYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSFKPPV-----IFGWDYSLMLTNMYSYIMFIVLW 261 (492)
Q Consensus 192 ~-----~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~f~i~~ 261 (492)
. .....+.....++.+++|++++.++|.++++.++++.++.++.+++ ..++|+|+++++..++++|++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~ 245 (315)
T 4amj_A 166 PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCW 245 (315)
T ss_dssp TTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 1 2235566666667789999999999999999999876543322211 22367899999999999999999
Q ss_pred HhHHHHHHHHhccC--CcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 262 IPFCIVMSVASFRH--QITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 262 ~P~~i~~~~~~~~~--~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
+|+.+..++..... ..........++.++|+++||+||+ +|++||++++++++
T Consensus 246 ~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~ 300 (315)
T 4amj_A 246 LPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA 300 (315)
T ss_dssp HHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhC
Confidence 99999998877632 3445566677899999999999999 99999999999985
No 15
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=322.03 Aligned_cols=274 Identities=18% Similarity=0.281 Sum_probs=220.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccccccc
Q psy11022 36 YDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIM 115 (492)
Q Consensus 36 ~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 115 (492)
+...+....+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+ +.+|..+.....+. |.+++..
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~-~~~p~~~~~~~~~~---~~~~~~~ 196 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVL-LTLPFQGTDILLGF---WPFGNAL 196 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHHTS---CTTHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHH-HHhHHHHHHHHhcC---CcCcccH
Confidence 3445677888999999999999999999999999999999999999999999984 78888888777663 8899999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhc-----cccccccc
Q psy11022 116 CHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYK-----VGPDYCSK 190 (492)
Q Consensus 116 C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~-----~~~~~C~~ 190 (492)
|++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|.++.. .....|..
T Consensus 197 C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~ 276 (434)
T 4ea3_A 197 CKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLV 276 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999877643 23345766
Q ss_pred ccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchhhHHHHHHHHHHHHHHHHhHhHH
Q psy11022 191 KVSYM-----ELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPFC 265 (492)
Q Consensus 191 ~~~~~-----~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~ 265 (492)
..+.. ..+.....++.+++|+++++++|.+|++++|+++++. +..++.++++|..+++++++++|++||+|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~ 354 (434)
T 4ea3_A 277 EIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS--GSREKDRNLRRITRLVLVVVAVFVGCWTPVQ 354 (434)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cchhhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 54322 3355666678899999999999999999998765432 2333456678999999999999999999999
Q ss_pred HHHHHHhccCCc--c---hHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 266 IVMSVASFRHQI--T---PSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 266 i~~~~~~~~~~~--~---~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
+..++....... . ....+..++.++|+++||+||+++|++||++++++++
T Consensus 355 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~ 409 (434)
T 4ea3_A 355 VFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCC 409 (434)
T ss_dssp HHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----
T ss_pred HHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998887663221 1 2334455688999999999999999999999999874
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=9.1e-39 Score=323.56 Aligned_cols=278 Identities=20% Similarity=0.230 Sum_probs=228.4
Q ss_pred cchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhch-hcHHHHHHHhcCCCccccccc
Q psy11022 36 YDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVV-IPVSAVMILAGIKQAEPIKEI 114 (492)
Q Consensus 36 ~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~-~p~~~~~~~~~~~~~~~~~~~ 114 (492)
.+.......+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++. +|..+.....+ .|.+++.
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~---~~~~~~~ 106 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK---KWIFGFA 106 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---SCCSHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcC---CccCCHH
Confidence 3445677888999999999999999999999999999999999999999999998764 88877766554 4888999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhc------cccccc
Q psy11022 115 MCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYK------VGPDYC 188 (492)
Q Consensus 115 ~C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~------~~~~~C 188 (492)
.|++..++..++..+|++++++||+|||++|++|++|+++++++++..+++++|+++++++++.++.. .....|
T Consensus 107 ~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c 186 (448)
T 2z73_A 107 ACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNC 186 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999998877632 123356
Q ss_pred cccccc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CCCCC-----cccchhhHHHHHHHHH
Q psy11022 189 SKKVSY----MELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNP------SFKPP-----VIFGWDYSLMLTNMYS 253 (492)
Q Consensus 189 ~~~~~~----~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~ 253 (492)
...+.. ...+.....++.+++|+++++++|.+|+++++|++++. ...+. +..++|+|++|+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~i 266 (448)
T 2z73_A 187 SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVI 266 (448)
T ss_dssp EECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHH
Confidence 655322 23445555567789999999999999999998764421 11111 1123578999999999
Q ss_pred HHHHHHHhHhHHHHHHHHhccC---CcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhcc
Q psy11022 254 YIMFIVLWIPFCIVMSVASFRH---QITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFHY 316 (492)
Q Consensus 254 ~~~f~i~~~P~~i~~~~~~~~~---~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~~ 316 (492)
+++|++||+|+.+..++..+.. .......+..++.++|+++||+||+++|++||+++++++++
T Consensus 267 v~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 267 VSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred HHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999888876632 23445556678899999999999999999999999999864
No 17
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=297.42 Aligned_cols=264 Identities=17% Similarity=0.317 Sum_probs=214.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCcccccccc
Q psy11022 36 YDWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIM 115 (492)
Q Consensus 36 ~~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 115 (492)
++..+.+..+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++.+ +.+|........ .|..|+..
T Consensus 7 ~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~-l~~p~~~~~~~~----~~~~~~~~ 81 (296)
T 2lnl_A 7 ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFA-LTLPIWAASKVN----GWIFGTFL 81 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHH-HHHHHHHHHHHS----SSCCSSHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHH-HhhhHHHhhccC----CCccchhH
Confidence 3445778889999999999999999999999999999999999999999999988 567776665543 38999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcccc------cccc
Q psy11022 116 CHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKVGP------DYCS 189 (492)
Q Consensus 116 C~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~~~------~~C~ 189 (492)
|+...++...+..+|.+++++||+|||+||++|++|+... +++....++++|+.+++.++|+....... ..|.
T Consensus 82 c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~ 160 (296)
T 2lnl_A 82 CKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCY 160 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCC
T ss_pred HHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceee
Confidence 9999999999999999999999999999999999887654 45667778889999999999887653211 1111
Q ss_pred cc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchhhHHHHHHHHHHHHHHHHhHhH
Q psy11022 190 KK-----VSYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNPSFKPPVIFGWDYSLMLTNMYSYIMFIVLWIPF 264 (492)
Q Consensus 190 ~~-----~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~ 264 (492)
.. ......+......+.+++|+.++.++|.++.++++| +..++++|.+|++..++++|++||+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~----------~~~~~~~k~~~~~~~v~~~f~icw~P~ 230 (296)
T 2lnl_A 161 EVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK----------AHMGQKHRAMRVIFAVVLIFLLCWLPY 230 (296)
T ss_dssp SCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSS----------CCCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhhhhhhhHHHHHHHhhhheeeeehHH
Confidence 11 112344556666788999999999999887654433 223567889999999999999999999
Q ss_pred HHHHHHHhccCC------------cchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 265 CIVMSVASFRHQ------------ITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 265 ~i~~~~~~~~~~------------~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
.+..+....... .........+++++||++||+||+++|++||++++|+++
T Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 293 (296)
T 2lnl_A 231 NLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILA 293 (296)
T ss_dssp HHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhc
Confidence 999888766221 123345667899999999999999999999999999984
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1.3e-37 Score=320.50 Aligned_cols=275 Identities=21% Similarity=0.332 Sum_probs=228.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhcceeeeeeeeccccccchhhHHHHHHHHHHHhhhchhcHHHHHHHhcCCCccccccccc
Q psy11022 37 DWNRVARLLITTGLSVLGSVGNGYMISSVMIEDHLRRRGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMC 116 (492)
Q Consensus 37 ~~~~~~~~~~~~~~~i~gl~gN~~vi~~i~~~~~lr~~~~~~l~~Lai~Dll~~~~~~p~~~~~~~~~~~~~~~~~~~~C 116 (492)
+.......+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++.+|..+.....+ .|.+++..|
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~---~~~~~~~~C 255 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK---TWTFGNFWC 255 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHT---SCCSCSHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcC---CeeCCcchh
Confidence 34567788999999999999999999999999999999999999999999999989999988887765 488999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhHHhHhhHHHHHHHHHhhhhhhhcc------ccccccc
Q psy11022 117 HVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPPECYTFFSKSHIILSVIMIWLVSILLTTLQFIYKV------GPDYCSK 190 (492)
Q Consensus 117 ~~~~~~~~~~~~~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~s~~~~~~~~~~~~------~~~~C~~ 190 (492)
++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|++++++++++..+.. +...|..
T Consensus 256 ~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~ 335 (514)
T 3sn6_R 256 EFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYA 335 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceee
Confidence 9999999999999999999999999999999999999999999999999999999999876654321 1112322
Q ss_pred c-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------------------------CCCCCcccc
Q psy11022 191 K-----VSYMELYQGIIGSLFFFIPIIITCILYMKITYKVRLARQNP------------------------SFKPPVIFG 241 (492)
Q Consensus 191 ~-----~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~------------------------~~~~~~~~~ 241 (492)
. ......+.....++.+++|+++++++|.+|++.+|++.++. .++..+..+
T Consensus 336 ~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (514)
T 3sn6_R 336 EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCL 415 (514)
T ss_dssp SSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CH
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhH
Confidence 2 12235677778888999999999999999999998753210 011122334
Q ss_pred hhhHHHHHHHHHHHHHHHHhHhHHHHHHHHhcc--CCcchHHHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 242 WDYSLMLTNMYSYIMFIVLWIPFCIVMSVASFR--HQITPSFYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 242 ~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~--~~~~~~~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
+++|+++++++++++|++||+|+.+..++.... ........+..++.++|+++||+||+ ++++||++++++++
T Consensus 416 ~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 416 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC 490 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhC
Confidence 678999999999999999999999998887763 23455666777899999999999999 99999999999984
No 19
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.68 E-value=1.1e-17 Score=171.52 Aligned_cols=110 Identities=24% Similarity=0.346 Sum_probs=101.8
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|+|++|||++|++++++.+|+.+......+. .|.+|..+|++..++..++..+|+++|++||+|||+||++|+
T Consensus 65 ~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~-~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~ 143 (510)
T 4grv_A 65 SLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHH-PWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPF 143 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCS-SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccc
Confidence 4668899999999999999999999998887665422 599999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|+..++++++..+++++|++++++++|++.
T Consensus 144 ~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 174 (510)
T 4grv_A 144 KAKTLMSRSRTKKFISAIWLASALLAIPMLF 174 (510)
T ss_dssp CCCCCCCCSCCHHHHHHHHHHHHHHHTTHHH
T ss_pred cccccccccccceeehHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 20
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.63 E-value=2e-16 Score=161.77 Aligned_cols=107 Identities=25% Similarity=0.424 Sum_probs=101.0
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|+++|++++|||++|++++++.+|+.+.....+ .|.+|...|++..++..++..+|++++++||+|||+||++|+
T Consensus 70 ~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~---~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl 146 (500)
T 2rh1_A 70 RLQTVTNYFITSLACADLVMGLAVVPFGAAHILMK---MWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPF 146 (500)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT---SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccC
Confidence 57889999999999999999999999999988888 799999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhcc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQF 482 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 482 (492)
+|.+.++++++..+++++|+++++++++|+
T Consensus 147 ~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~ 176 (500)
T 2rh1_A 147 KYQSLLTKNKARVIILMVWIVSGLTSFLPI 176 (500)
T ss_dssp TTSCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeeecccceeehhhHHHHHHHHHHhcch
Confidence 999999999999999999999999996554
No 21
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.63 E-value=2.8e-16 Score=158.38 Aligned_cols=112 Identities=19% Similarity=0.411 Sum_probs=104.1
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|++.+++.+|..+.....+ .|.+|...|++.+++..++..+|++++++||+|||+||++|+
T Consensus 38 ~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 114 (452)
T 3rze_A 38 KLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMS---KWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPL 114 (452)
T ss_dssp TTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSS---SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCcc
Confidence 46789999999999999999999999999998888 798999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhcccccee
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFEKSIY 487 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 487 (492)
+|...++++++..+++++|++++++++|.+....|
T Consensus 115 ~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~ 149 (452)
T 3rze_A 115 RYLKYRTKTRASATILGAWFLSFLWVIPILGWNHF 149 (452)
T ss_dssp CTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999887654433
No 22
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.62 E-value=1.8e-16 Score=151.65 Aligned_cols=108 Identities=23% Similarity=0.440 Sum_probs=102.2
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|+++|+++.|||++|++.++..+|..+.....+ .|.+|+..|++.+++...+..+|++++++||+|||.||++|+
T Consensus 41 ~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~ 117 (315)
T 4amj_A 41 RLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG---TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPF 117 (315)
T ss_dssp GGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHS---SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred hhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcC---CeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 56789999999999999999999999999888888 788999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|++.++++++...++++|+++++++.||+.
T Consensus 118 ~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 148 (315)
T 4amj_A 118 RYQSLMTRARAKVIICTVWAISALVSFLPIM 148 (315)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhHHHhhhHHHHHHHHHHHHHHH
Confidence 9999899999999999999999999987764
No 23
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.61 E-value=5.2e-16 Score=157.10 Aligned_cols=108 Identities=17% Similarity=0.274 Sum_probs=103.1
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|++.+++.+|..+.....+ .|.+|...|++..++..++..+|++++++||+|||+||++|+
T Consensus 53 ~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~ 129 (467)
T 3uon_A 53 HLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIG---YWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPL 129 (467)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSS---SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 57889999999999999999999999999998888 788999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|...++++++..+++++|++++++++|++.
T Consensus 130 ~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 160 (467)
T 3uon_A 130 TYPVKRTTKMAGMMIAAAWVLSFILWAPAIL 160 (467)
T ss_dssp TSGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998874
No 24
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.60 E-value=7e-16 Score=156.96 Aligned_cols=109 Identities=14% Similarity=0.254 Sum_probs=93.1
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|+++++. +|..+.....++ .|.+|...|++..++..++..+|++++++||+|||+||++|+
T Consensus 50 ~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~--~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~ 126 (484)
T 3vw7_A 50 KVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGS--DWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPM 126 (484)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTS--CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcC--CcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEccc
Confidence 57889999999999999999765 665555555442 688999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhcccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFEK 484 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 484 (492)
+|...++++++..+++++|++++++++|++..
T Consensus 127 ~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~ 158 (484)
T 3vw7_A 127 QSLSWRTLGRASFTCLAIWALAIAGVVPLLLK 158 (484)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998854
No 25
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.59 E-value=1.4e-15 Score=144.35 Aligned_cols=105 Identities=20% Similarity=0.256 Sum_probs=91.7
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|+++|+++.|||++|+++++ .+|....... + .|..|+..|+...++...+..+|++++++||+|||.||++|+
T Consensus 41 ~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~---~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~ 115 (296)
T 2lnl_A 41 VGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-N---GWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHAT 115 (296)
T ss_dssp TCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-S---SSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCS
T ss_pred CCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-C---CCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhcc
Confidence 5789999999999999999875 5676665544 3 588999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|.... ++++..+++++|+.++++++|++.
T Consensus 116 ~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~ 145 (296)
T 2lnl_A 116 RTLTQK-RHLVKFVCLGCWGLSMNLSLPFFL 145 (296)
T ss_dssp SSSCCH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhh-hhhhHheehHHHHHHHHHhcchhh
Confidence 988654 567777888999999999998764
No 26
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.59 E-value=5.6e-16 Score=156.70 Aligned_cols=108 Identities=21% Similarity=0.420 Sum_probs=101.5
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|+++++. +|+.+.....+ .|.+|...|++.+++..++..+|++++++||+|||+||++|+
T Consensus 47 ~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 122 (464)
T 4dkl_A 47 KMKTATNIYIFNLALADALATST-LPFQSVNYLMG---TWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPV 122 (464)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS---SCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC---CcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 46789999999999999999876 99999988888 788999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhcccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFEK 484 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 484 (492)
+|.+.++++++..+++++|++++++++|++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~ 154 (464)
T 4dkl_A 123 KALDFRTPRNAKIVNVCNWILSSAIGLPVMFM 154 (464)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccHhHHhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988853
No 27
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.59 E-value=1.6e-15 Score=147.37 Aligned_cols=108 Identities=21% Similarity=0.392 Sum_probs=101.0
Q ss_pred cccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeecc
Q psy11022 372 SIIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMP 451 (492)
Q Consensus 372 ~~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p 451 (492)
+++|+++|+++.|||++|++.++..+|..+.....+ .|.+|+..|++.+++...+..+|++++++||+|||+||++|
T Consensus 67 ~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P 143 (349)
T 1u19_A 67 KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHG---YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP 143 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT---SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcC---eeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCC
Confidence 367889999999999999999999999998888888 78899999999999999999999999999999999999999
Q ss_pred CcccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 452 PECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
++|++ ++++++...++++|+.++++++|++.
T Consensus 144 ~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~ 174 (349)
T 1u19_A 144 MSNFR-FGENHAIMGVAFTWVMALACAAPPLV 174 (349)
T ss_dssp SSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGT
T ss_pred cccee-eccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99876 79999999999999999999999874
No 28
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.58 E-value=1.9e-15 Score=147.89 Aligned_cols=108 Identities=15% Similarity=0.271 Sum_probs=99.8
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|+++|+++.|||++|++.+++.+|..+.....+ .|.+|...|++.+++...+..+|++++++||+|||+||++|+
T Consensus 62 ~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~ 138 (364)
T 2ks9_A 62 RMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN---EWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL 138 (364)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT---SCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 56889999999999999999999999988888877 788999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFEKS 485 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 485 (492)
+|+ ++++++...++++|++++++++|++...
T Consensus 139 ~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~ 169 (364)
T 2ks9_A 139 QPR--LSATATKVVICVIWVLALLLAFPQGYYS 169 (364)
T ss_dssp TTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTS
T ss_pred ccc--cccchHHHHHHHHHHHHHHHHhHHHHHh
Confidence 976 6899999999999999999999887543
No 29
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.57 E-value=1.3e-15 Score=156.46 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=91.2
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|+++|++++|||++|++++++..|..+.. ..+ .|.++...|++..++..++..+|+++|++||+|||+||+ |+
T Consensus 93 ~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~---~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~ 167 (520)
T 3v2y_A 93 KFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GAT---TYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KM 167 (520)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG---GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-
T ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc---ceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-cc
Confidence 4788999999999999999999888877766 344 688999999999999999999999999999999999999 99
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|...++++++..+++++|++++++++||+.
T Consensus 168 ~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~ 198 (520)
T 3v2y_A 168 KLHNGSNNFRLFLLISACWVISLILGGLPIM 198 (520)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998875
No 30
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.57 E-value=1.8e-15 Score=153.81 Aligned_cols=112 Identities=21% Similarity=0.367 Sum_probs=102.4
Q ss_pred cccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeecc
Q psy11022 372 SIIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMP 451 (492)
Q Consensus 372 ~~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p 451 (492)
.++++++|++++|||++|++++++.+|+.+.....++ .|.+|...|++..++..++..+|++++++||+|||+||++|
T Consensus 67 ~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~--~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P 144 (481)
T 3pbl_A 67 RALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGG--VWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMP 144 (481)
T ss_dssp STTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTS--CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3678899999999999999999999999888777643 68899999999999999999999999999999999999999
Q ss_pred Ccc---cceeehhHHHHHHHHHHHHHHHHhhhccccc
Q psy11022 452 PEC---YTFFSKSHIILSVIMIWLVSILLTTLQFEKS 485 (492)
Q Consensus 452 ~~~---~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 485 (492)
++| .+..+++++..+++++|++++++++|++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~ 181 (481)
T 3pbl_A 145 VHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGF 181 (481)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 998 5678899999999999999999999987643
No 31
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.56 E-value=2.7e-15 Score=150.53 Aligned_cols=111 Identities=22% Similarity=0.352 Sum_probs=96.1
Q ss_pred ccccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeec
Q psy11022 371 RSIIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCM 450 (492)
Q Consensus 371 ~~~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~ 450 (492)
..++|+++|+++.|||++|++. ++.+|+.+.....+ .|.+|...|++..++..++..+|++++++||+|||+||++
T Consensus 153 ~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~ 228 (434)
T 4ea3_A 153 HTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLG---FWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICH 228 (434)
T ss_dssp TCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHT---SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhc---CCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEc
Confidence 3467899999999999999998 67899999988888 7889999999999999999999999999999999999999
Q ss_pred cCcccceeehhHHHHHHHHHHHHHHHHhhhccccc
Q psy11022 451 PPECYTFFSKSHIILSVIMIWLVSILLTTLQFEKS 485 (492)
Q Consensus 451 p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 485 (492)
|++|...++++++..+++++|++++++++|++...
T Consensus 229 Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~ 263 (434)
T 4ea3_A 229 PIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMG 263 (434)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred ccccccccchhhhHHhhhhhhhHHHHHHhhHheee
Confidence 99999999999999999999999999999877543
No 32
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.56 E-value=3.2e-15 Score=152.14 Aligned_cols=106 Identities=15% Similarity=0.242 Sum_probs=98.0
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|++++++.+|+.+... . .|..+...|++..++..++..+|++++++||+|||+||++|+
T Consensus 51 ~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~---~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 125 (488)
T 3eml_A 51 NLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--T---GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPL 125 (488)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--T---CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--c---cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeccc
Confidence 57889999999999999999999999877633 2 577899999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|...++++++..+++++|++++++++|++.
T Consensus 126 ~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 156 (488)
T 3eml_A 126 RYNGLVTGTRAKGIIAICWVLSFAIGLTPML 156 (488)
T ss_dssp GSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998875
No 33
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.56 E-value=1.8e-15 Score=155.33 Aligned_cols=107 Identities=25% Similarity=0.432 Sum_probs=101.7
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++|++.|++++|||++|++++++.+|+.+.....+ .|.+|...|++..++..++..+|++++++||+|||+||++|+
T Consensus 212 ~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl 288 (514)
T 3sn6_R 212 RLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK---TWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPF 288 (514)
T ss_dssp GGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHT---SCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcC---CeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 57889999999999999999999999999998888 788999999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhcc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQF 482 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 482 (492)
+|+..++++++..+++++|+++++++++|+
T Consensus 289 ~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~ 318 (514)
T 3sn6_R 289 KYQSLLTKNKARVIILMVWIVSGLTSFLPI 318 (514)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred ccchhccchHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999987665
No 34
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.55 E-value=2e-15 Score=154.28 Aligned_cols=111 Identities=19% Similarity=0.296 Sum_probs=100.5
Q ss_pred ccccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeec
Q psy11022 371 RSIIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCM 450 (492)
Q Consensus 371 ~~~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~ 450 (492)
..++|+++|++++|||++|++++ +.+|+.+..... .|.+|...|++..++..++..+|++++++||+|||+||++
T Consensus 76 ~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~----~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~ 150 (502)
T 3odu_A 76 QKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA----NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVH 150 (502)
T ss_dssp TCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT----CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc----CCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheec
Confidence 34678999999999999999995 688988776654 4889999999999999999999999999999999999999
Q ss_pred cCcccceeehhHHHHHHHHHHHHHHHHhhhccccce
Q psy11022 451 PPECYTFFSKSHIILSVIMIWLVSILLTTLQFEKSI 486 (492)
Q Consensus 451 p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 486 (492)
|++|...++++++..+++++|++++++++|++....
T Consensus 151 P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 186 (502)
T 3odu_A 151 ATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN 186 (502)
T ss_dssp TTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEE
T ss_pred ccccccccchhHHHHhhhHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999885433
No 35
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.54 E-value=3.1e-15 Score=150.54 Aligned_cols=106 Identities=15% Similarity=0.242 Sum_probs=97.7
Q ss_pred ccccccchHhHHHHHhhHhhhccchhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeeccC
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVVIPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMPP 452 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p~ 452 (492)
++++++|++++|||++|++.+++.+|..+... . .|..+...|++..++..++..+|++++++||+|||+||++|+
T Consensus 61 ~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~---~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~ 135 (447)
T 4eiy_A 61 NLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--T---GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPL 135 (447)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--T---TCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c---ccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEeccc
Confidence 56889999999999999999999999877633 3 477889999999999999999999999999999999999999
Q ss_pred cccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 453 ECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
+|...++++++..+++++|++++++++|++.
T Consensus 136 ~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~ 166 (447)
T 4eiy_A 136 RYNGLVTGTRAKGIIAICWVLSFAIGLTPML 166 (447)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred ccchhhhHHHHHHHHhHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999998875
No 36
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.53 E-value=9.1e-15 Score=147.31 Aligned_cols=108 Identities=20% Similarity=0.311 Sum_probs=100.0
Q ss_pred ccccccchHhHHHHHhhHhhhccc-hhHHHHHHHhcCcCcccccccchhHHHHHHHHHHHHHHHHHHHHhhhceeeeecc
Q psy11022 373 IIHITGNTYIAVEALADLLVSGVV-IPVSAVMILAGIKQAEPIKEIMCHVQWFLTLLCSLVTVWTLAMIAMENYVRLCMP 451 (492)
Q Consensus 373 ~l~~~~~~~~~~la~~D~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~p 451 (492)
++|++.|++++|||++|++.+++. +|..+.....+ .|.++...|++..++..++..+|++++++||+|||+||++|
T Consensus 64 ~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~---~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P 140 (448)
T 2z73_A 64 SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK---KWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRP 140 (448)
T ss_dssp TTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcC---CccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 467889999999999999998774 89888888877 78899999999999999999999999999999999999999
Q ss_pred CcccceeehhHHHHHHHHHHHHHHHHhhhccc
Q psy11022 452 PECYTFFSKSHIILSVIMIWLVSILLTTLQFE 483 (492)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 483 (492)
++|++.++++++..+++++|+++++++++++.
T Consensus 141 ~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 172 (448)
T 2z73_A 141 MAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF 172 (448)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG
T ss_pred ccccceechhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987764
No 37
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.57 E-value=3.7e-09 Score=62.97 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhhceeeeeccCcccceeehh
Q psy11022 432 VTVWTLAMIAMENYVRLCMPPECYTFFSKS 461 (492)
Q Consensus 432 ~s~~~l~~is~dRy~ai~~p~~~~~~~~~~ 461 (492)
+|+++|++||+|||+||++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999998877765
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.45 E-value=6.6e-08 Score=60.76 Aligned_cols=35 Identities=26% Similarity=0.652 Sum_probs=31.4
Q ss_pred HHHHHHHHhhcccccchhhhhcChHHHHHHHHHhc
Q psy11022 281 FYYLAWLALSKSCINSVLYCISNRHFRNAYINLFH 315 (492)
Q Consensus 281 ~~~~~~l~~~~s~~nP~IY~~~~~~~R~~~~~~~~ 315 (492)
..+..++.++||++||+||++++++||++++++++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~ 37 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFP 37 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhh
Confidence 45667889999999999999999999999999874
No 39
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.37 E-value=9.2e-08 Score=56.74 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccchh
Q psy11022 129 VTVWTLAMIAMENYVRLCMPPECYTFFSKS 158 (492)
Q Consensus 129 ~s~~~l~~ia~dRy~aI~~P~~~~~~~t~~ 158 (492)
+|++++++||+|||+||++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999988877664
No 40
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.31 E-value=2.8e-05 Score=46.05 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHHHHHhHhHHHHHHHHh
Q psy11022 243 DYSLMLTNMYSYIMFIVLWIPFCIVMSVAS 272 (492)
Q Consensus 243 ~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~ 272 (492)
|+|.+|++.++++.|++||+|+.+..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 356889999999999999999998776543
No 41
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=94.73 E-value=0.0015 Score=44.49 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhhhcceeeeeeeecccc
Q psy11022 42 ARLLITTGLSVLGSVGNGYMISSVMIEDHL 71 (492)
Q Consensus 42 ~~~~~~~~~~i~gl~gN~~vi~~i~~~~~l 71 (492)
...+++.+++++|++||+++++++.++|--
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 677899999999999999999998776643
No 42
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=37.15 E-value=17 Score=18.68 Aligned_cols=12 Identities=33% Similarity=0.855 Sum_probs=10.1
Q ss_pred hHHHHHHHHHhc
Q psy11022 304 RHFRNAYINLFH 315 (492)
Q Consensus 304 ~~~R~~~~~~~~ 315 (492)
++||+.++++++
T Consensus 4 krfrkkfkklfk 15 (27)
T 2ket_A 4 KRFRKKFKKLFK 15 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 678999999885
No 43
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=22.80 E-value=55 Score=19.12 Aligned_cols=23 Identities=13% Similarity=0.285 Sum_probs=13.2
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhhc
Q psy11022 208 FIPIIIT-CILYMKITYKVRLARQ 230 (492)
Q Consensus 208 ~ip~~ii-~~~y~~i~~~l~~~~~ 230 (492)
++|++++ .+.|..+.|--+|+++
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3444433 5677777766666543
Done!