Query psy11025
Match_columns 535
No_of_seqs 288 out of 672
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 16:14:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ifu_A Gamma-SNAP; membrane fu 99.7 1.1E-15 3.9E-20 153.7 23.1 193 317-533 31-236 (307)
2 1qqe_A Vesicular transport pro 99.7 2.7E-15 9.2E-20 149.9 23.2 198 313-532 24-240 (292)
3 2ifu_A Gamma-SNAP; membrane fu 99.3 5.1E-11 1.8E-15 119.6 18.7 162 320-485 81-244 (307)
4 1qqe_A Vesicular transport pro 99.2 3.8E-10 1.3E-14 112.4 15.8 158 320-479 82-244 (292)
5 3ulq_A Response regulator aspa 98.7 1.4E-06 4.7E-11 89.0 21.9 177 321-520 109-289 (383)
6 4a1s_A PINS, partner of inscut 98.7 4E-06 1.4E-10 85.2 24.3 137 321-457 92-248 (411)
7 3ro2_A PINS homolog, G-protein 98.7 6.2E-06 2.1E-10 79.7 24.0 137 321-457 49-208 (338)
8 3sf4_A G-protein-signaling mod 98.6 4.9E-06 1.7E-10 83.6 23.5 167 331-520 163-332 (406)
9 4a1s_A PINS, partner of inscut 98.6 4.6E-06 1.6E-10 84.8 23.4 178 320-520 171-368 (411)
10 3ro2_A PINS homolog, G-protein 98.6 6.5E-06 2.2E-10 79.6 23.1 167 331-520 159-328 (338)
11 3sf4_A G-protein-signaling mod 98.6 5.5E-06 1.9E-10 83.2 23.4 137 321-457 53-212 (406)
12 3q15_A PSP28, response regulat 98.6 4.6E-06 1.6E-10 85.1 22.1 175 322-520 108-286 (378)
13 3q15_A PSP28, response regulat 98.6 9.2E-06 3.1E-10 82.9 23.1 198 320-520 146-361 (378)
14 3gw4_A Uncharacterized protein 98.5 9E-06 3.1E-10 74.0 20.4 150 348-520 21-172 (203)
15 3ro3_A PINS homolog, G-protein 98.5 1.2E-05 4.2E-10 69.0 19.6 139 320-458 14-155 (164)
16 3ro3_A PINS homolog, G-protein 98.5 1.7E-05 5.7E-10 68.2 19.5 147 351-520 7-154 (164)
17 3ulq_A Response regulator aspa 98.5 1.9E-05 6.4E-10 80.5 22.6 199 320-520 148-364 (383)
18 3nf1_A KLC 1, kinesin light ch 98.4 1.7E-05 6E-10 76.4 20.6 180 320-520 32-220 (311)
19 3gw4_A Uncharacterized protein 98.4 3.2E-05 1.1E-09 70.2 21.1 138 320-457 31-172 (203)
20 3nf1_A KLC 1, kinesin light ch 98.4 1.6E-05 5.6E-10 76.6 19.8 200 320-520 74-303 (311)
21 3edt_B KLC 2, kinesin light ch 98.4 2.8E-05 9.7E-10 73.5 20.0 200 321-520 49-277 (283)
22 3edt_B KLC 2, kinesin light ch 98.3 3.5E-05 1.2E-09 72.8 18.3 169 331-520 17-194 (283)
23 2yhc_A BAMD, UPF0169 lipoprote 98.3 6.7E-05 2.3E-09 71.0 19.8 183 320-532 9-222 (225)
24 3u3w_A Transcriptional activat 98.3 3.5E-05 1.2E-09 75.9 18.0 178 320-520 80-262 (293)
25 3uq3_A Heat shock protein STI1 98.1 0.00026 8.9E-09 66.1 20.5 188 321-520 11-232 (258)
26 4b4t_Q 26S proteasome regulato 98.1 6.1E-05 2.1E-09 77.2 16.8 178 320-520 60-241 (434)
27 2qfc_A PLCR protein; TPR, HTH, 98.1 9.7E-05 3.3E-09 72.7 16.6 177 321-520 81-262 (293)
28 3qky_A Outer membrane assembly 98.0 0.00013 4.4E-09 70.1 16.2 137 320-460 20-176 (261)
29 2pl2_A Hypothetical conserved 97.9 0.00021 7.1E-09 67.4 15.1 111 368-520 100-210 (217)
30 3vtx_A MAMA; tetratricopeptide 97.9 0.0012 4.2E-08 59.2 19.0 155 320-520 10-166 (184)
31 4b4t_Q 26S proteasome regulato 97.8 0.00018 6.2E-09 73.6 14.3 180 317-520 7-200 (434)
32 4eqf_A PEX5-related protein; a 97.8 0.00054 1.9E-08 68.4 17.3 23 498-520 284-306 (365)
33 1xnf_A Lipoprotein NLPI; TPR, 97.8 0.001 3.5E-08 62.9 18.1 183 321-520 49-240 (275)
34 1hz4_A MALT regulatory protein 97.8 0.0013 4.4E-08 66.1 19.3 175 322-520 21-199 (373)
35 3u3w_A Transcriptional activat 97.8 0.00023 7.8E-09 70.0 13.1 128 330-457 130-262 (293)
36 2ho1_A Type 4 fimbrial biogene 97.8 0.00082 2.8E-08 63.1 16.5 157 321-520 77-234 (252)
37 3ieg_A DNAJ homolog subfamily 97.7 0.0011 3.9E-08 64.6 17.8 120 367-520 203-331 (359)
38 1hz4_A MALT regulatory protein 97.7 0.0025 8.5E-08 64.0 20.7 137 321-458 59-200 (373)
39 4i17_A Hypothetical protein; T 97.7 0.0014 4.9E-08 61.1 17.6 129 320-458 12-143 (228)
40 2q7f_A YRRB protein; TPR, prot 97.7 0.0014 4.6E-08 60.8 17.2 155 320-520 62-218 (243)
41 4gcn_A Protein STI-1; structur 97.7 0.00069 2.3E-08 58.5 14.1 95 324-422 17-113 (127)
42 4gyw_A UDP-N-acetylglucosamine 97.7 0.00056 1.9E-08 77.4 16.9 154 321-520 15-170 (723)
43 2vq2_A PILW, putative fimbrial 97.7 0.0015 5E-08 59.5 16.6 90 321-420 14-105 (225)
44 2ho1_A Type 4 fimbrial biogene 97.7 0.0013 4.5E-08 61.7 16.6 154 322-520 44-200 (252)
45 2qfc_A PLCR protein; TPR, HTH, 97.7 0.00027 9.3E-09 69.4 12.1 136 322-457 122-262 (293)
46 1fch_A Peroxisomal targeting s 97.7 0.002 6.7E-08 63.9 18.4 23 498-520 288-310 (368)
47 4gcn_A Protein STI-1; structur 97.6 0.0011 3.9E-08 57.1 14.3 101 351-457 6-108 (127)
48 2y4t_A DNAJ homolog subfamily 97.6 0.0024 8.1E-08 65.3 18.6 186 321-520 32-236 (450)
49 4eqf_A PEX5-related protein; a 97.6 0.0019 6.5E-08 64.4 17.4 80 368-458 193-273 (365)
50 1xi4_A Clathrin heavy chain; a 97.6 0.0012 4E-08 79.0 17.5 168 317-520 1064-1246(1630)
51 2vq2_A PILW, putative fimbrial 97.6 0.0025 8.4E-08 58.0 16.3 166 321-530 48-218 (225)
52 3urz_A Uncharacterized protein 97.6 0.0031 1.1E-07 58.8 17.3 154 323-520 12-182 (208)
53 3hym_B Cell division cycle pro 97.6 0.0027 9.2E-08 61.4 17.4 162 320-520 130-295 (330)
54 2yhc_A BAMD, UPF0169 lipoprote 97.6 0.0014 4.9E-08 61.7 15.0 137 320-460 46-212 (225)
55 3cv0_A Peroxisome targeting si 97.6 0.0033 1.1E-07 60.7 18.0 22 499-520 244-265 (327)
56 3as5_A MAMA; tetratricopeptide 97.6 0.0025 8.5E-08 55.8 15.7 155 321-520 14-169 (186)
57 3ieg_A DNAJ homolog subfamily 97.5 0.0082 2.8E-07 58.4 20.2 59 395-460 157-216 (359)
58 2y4t_A DNAJ homolog subfamily 97.5 0.0023 8E-08 65.3 16.7 165 321-520 183-354 (450)
59 2q7f_A YRRB protein; TPR, prot 97.5 0.0011 3.8E-08 61.4 13.0 155 320-520 28-184 (243)
60 3qky_A Outer membrane assembly 97.5 0.0014 4.7E-08 62.8 14.0 139 320-460 57-223 (261)
61 3u4t_A TPR repeat-containing p 97.5 0.0025 8.7E-08 60.3 15.4 186 321-520 43-246 (272)
62 1a17_A Serine/threonine protei 97.4 0.0038 1.3E-07 54.2 14.3 126 320-459 18-144 (166)
63 3uq3_A Heat shock protein STI1 97.4 0.003 1E-07 58.7 14.1 135 320-460 43-201 (258)
64 1w3b_A UDP-N-acetylglucosamine 97.3 0.0081 2.8E-07 60.4 18.2 20 501-520 311-330 (388)
65 1elr_A TPR2A-domain of HOP; HO 97.3 0.0055 1.9E-07 50.4 14.0 99 321-423 10-110 (131)
66 3cv0_A Peroxisome targeting si 97.3 0.01 3.5E-07 57.2 17.9 89 320-418 26-115 (327)
67 4gco_A Protein STI-1; structur 97.3 0.0025 8.5E-08 55.0 11.9 89 323-421 21-110 (126)
68 3hym_B Cell division cycle pro 97.3 0.0076 2.6E-07 58.2 16.7 23 498-520 239-261 (330)
69 1fch_A Peroxisomal targeting s 97.3 0.0052 1.8E-07 60.8 15.6 166 321-520 188-355 (368)
70 2fo7_A Synthetic consensus TPR 97.2 0.011 3.6E-07 48.5 14.9 122 321-458 7-129 (136)
71 3as5_A MAMA; tetratricopeptide 97.2 0.0094 3.2E-07 52.0 14.9 125 320-460 47-172 (186)
72 2xev_A YBGF; tetratricopeptide 97.2 0.005 1.7E-07 51.4 12.4 101 320-424 7-108 (129)
73 3u4t_A TPR repeat-containing p 97.2 0.0054 1.8E-07 58.0 13.8 125 320-458 8-134 (272)
74 1w3b_A UDP-N-acetylglucosamine 97.1 0.0096 3.3E-07 59.9 16.3 111 368-520 253-364 (388)
75 3sz7_A HSC70 cochaperone (SGT) 97.1 0.0045 1.5E-07 54.9 12.3 95 320-424 16-111 (164)
76 3upv_A Heat shock protein STI1 97.1 0.0049 1.7E-07 51.8 11.9 92 321-422 10-102 (126)
77 3vtx_A MAMA; tetratricopeptide 97.1 0.011 3.7E-07 52.9 14.8 128 317-457 20-166 (184)
78 2xpi_A Anaphase-promoting comp 97.1 0.0078 2.7E-07 64.0 16.1 119 367-520 456-575 (597)
79 4gyw_A UDP-N-acetylglucosamine 97.1 0.0048 1.6E-07 69.8 14.9 125 317-458 24-171 (723)
80 3fp2_A TPR repeat-containing p 97.1 0.0059 2E-07 63.7 14.7 157 325-520 320-487 (537)
81 4gco_A Protein STI-1; structur 97.1 0.0088 3E-07 51.5 13.4 100 348-460 9-109 (126)
82 1ouv_A Conserved hypothetical 97.1 0.019 6.4E-07 54.9 16.8 23 498-520 185-211 (273)
83 3n71_A Histone lysine methyltr 97.1 0.0077 2.6E-07 65.0 15.4 99 325-424 319-425 (490)
84 4abn_A Tetratricopeptide repea 97.1 0.0027 9.2E-08 67.4 11.6 158 321-520 108-283 (474)
85 2gw1_A Mitochondrial precursor 97.0 0.005 1.7E-07 63.6 13.3 162 320-520 309-474 (514)
86 3gyz_A Chaperone protein IPGC; 97.0 0.0069 2.3E-07 54.5 12.6 103 314-426 29-138 (151)
87 1hh8_A P67PHOX, NCF-2, neutrop 97.0 0.0019 6.6E-08 59.1 9.0 126 322-460 13-149 (213)
88 1xnf_A Lipoprotein NLPI; TPR, 97.0 0.017 5.7E-07 54.4 15.8 119 329-460 19-139 (275)
89 1hxi_A PEX5, peroxisome target 97.0 0.0091 3.1E-07 50.9 12.6 92 320-421 22-114 (121)
90 2pl2_A Hypothetical conserved 97.0 0.0077 2.6E-07 56.4 13.1 89 355-457 120-210 (217)
91 2hr2_A Hypothetical protein; a 97.0 0.0087 3E-07 55.1 12.7 101 322-423 18-133 (159)
92 2gw1_A Mitochondrial precursor 97.0 0.0092 3.1E-07 61.6 14.4 29 392-420 237-265 (514)
93 3gyz_A Chaperone protein IPGC; 96.9 0.01 3.5E-07 53.3 12.8 101 348-461 32-133 (151)
94 4i17_A Hypothetical protein; T 96.9 0.026 8.9E-07 52.3 16.0 132 355-520 9-142 (228)
95 1elr_A TPR2A-domain of HOP; HO 96.9 0.028 9.6E-07 46.0 14.4 101 353-459 4-106 (131)
96 1ouv_A Conserved hypothetical 96.9 0.029 1E-06 53.5 16.5 22 499-520 222-247 (273)
97 2xpi_A Anaphase-promoting comp 96.9 0.028 9.6E-07 59.6 18.0 57 359-421 379-436 (597)
98 3upv_A Heat shock protein STI1 96.9 0.016 5.4E-07 48.6 12.9 95 352-459 4-99 (126)
99 2dba_A Smooth muscle cell asso 96.9 0.0098 3.3E-07 50.4 11.7 96 320-422 33-129 (148)
100 4ga2_A E3 SUMO-protein ligase 96.9 0.0045 1.5E-07 54.8 9.8 85 329-423 11-96 (150)
101 3rkv_A Putative peptidylprolyl 96.9 0.011 3.7E-07 52.2 12.0 97 321-423 17-128 (162)
102 1hh8_A P67PHOX, NCF-2, neutrop 96.8 0.012 4.1E-07 53.7 12.6 139 353-520 7-146 (213)
103 4abn_A Tetratricopeptide repea 96.8 0.012 4.3E-07 62.3 14.4 123 320-460 142-286 (474)
104 2lni_A Stress-induced-phosphop 96.8 0.0083 2.8E-07 49.7 10.5 94 320-423 21-115 (133)
105 2vsy_A XCC0866; transferase, g 96.8 0.016 5.6E-07 62.2 14.8 111 330-457 4-116 (568)
106 2vyi_A SGTA protein; chaperone 96.8 0.018 6.2E-07 47.1 11.9 92 321-422 18-110 (131)
107 1xi4_A Clathrin heavy chain; a 96.8 0.019 6.4E-07 68.9 16.1 103 339-457 1122-1246(1630)
108 2xcb_A PCRH, regulatory protei 96.7 0.015 5.1E-07 50.4 11.5 92 322-423 25-117 (142)
109 1p5q_A FKBP52, FK506-binding p 96.7 0.025 8.7E-07 57.0 14.8 96 321-422 153-260 (336)
110 1a17_A Serine/threonine protei 96.7 0.068 2.3E-06 46.0 15.7 95 353-460 13-109 (166)
111 2vgx_A Chaperone SYCD; alterna 96.7 0.01 3.5E-07 52.4 10.5 99 348-459 17-116 (148)
112 3sz7_A HSC70 cochaperone (SGT) 96.7 0.027 9.1E-07 49.7 13.1 94 354-460 12-107 (164)
113 3q49_B STIP1 homology and U bo 96.7 0.021 7.1E-07 48.1 11.9 95 320-424 14-109 (137)
114 2vgx_A Chaperone SYCD; alterna 96.6 0.016 5.3E-07 51.2 11.4 93 321-423 27-120 (148)
115 2fo7_A Synthetic consensus TPR 96.6 0.083 2.8E-06 42.9 15.3 124 356-520 4-128 (136)
116 1na0_A Designed protein CTPR3; 96.6 0.026 8.8E-07 45.7 11.9 93 320-422 14-107 (125)
117 1elw_A TPR1-domain of HOP; HOP 96.6 0.02 6.9E-07 46.0 11.1 89 322-420 11-100 (118)
118 2hr2_A Hypothetical protein; a 96.6 0.025 8.5E-07 52.0 12.7 109 351-460 10-130 (159)
119 2xev_A YBGF; tetratricopeptide 96.6 0.03 1E-06 46.5 12.2 99 356-460 6-104 (129)
120 2ond_A Cleavage stimulation fa 96.6 0.047 1.6E-06 53.7 15.4 94 355-459 101-196 (308)
121 3fp2_A TPR repeat-containing p 96.5 0.023 7.7E-07 59.3 13.4 129 322-460 351-490 (537)
122 3qww_A SET and MYND domain-con 96.5 0.026 8.7E-07 59.9 13.8 94 330-424 313-414 (433)
123 2vsy_A XCC0866; transferase, g 96.5 0.03 1E-06 60.1 14.6 122 320-458 28-154 (568)
124 3rkv_A Putative peptidylprolyl 96.5 0.019 6.4E-07 50.6 10.9 97 356-459 15-124 (162)
125 2fbn_A 70 kDa peptidylprolyl i 96.5 0.028 9.7E-07 51.2 12.3 95 322-422 45-152 (198)
126 4g1t_A Interferon-induced prot 96.4 0.049 1.7E-06 56.0 15.0 100 322-421 58-167 (472)
127 3rjv_A Putative SEL1 repeat pr 96.4 0.08 2.7E-06 49.3 15.2 116 322-458 25-155 (212)
128 1ihg_A Cyclophilin 40; ppiase 96.4 0.024 8.3E-07 58.3 12.3 95 322-422 230-337 (370)
129 2kck_A TPR repeat; tetratricop 96.3 0.007 2.4E-07 48.4 6.4 91 321-419 12-104 (112)
130 2xm6_A Protein corresponding t 96.3 0.38 1.3E-05 50.3 21.4 22 499-520 403-428 (490)
131 1klx_A Cysteine rich protein B 96.3 0.036 1.2E-06 48.5 11.4 46 367-420 76-125 (138)
132 2xcb_A PCRH, regulatory protei 96.3 0.077 2.6E-06 45.7 13.4 100 348-460 14-114 (142)
133 2ond_A Cleavage stimulation fa 96.2 0.035 1.2E-06 54.6 12.1 84 366-462 183-271 (308)
134 4ga2_A E3 SUMO-protein ligase 96.2 0.048 1.6E-06 48.0 11.8 91 322-422 38-130 (150)
135 1elw_A TPR1-domain of HOP; HOP 96.2 0.12 4E-06 41.3 13.3 93 355-460 6-100 (118)
136 3txn_A 26S proteasome regulato 96.2 0.29 9.9E-06 51.3 19.5 185 320-527 24-214 (394)
137 2vyi_A SGTA protein; chaperone 96.2 0.12 3.9E-06 42.1 13.3 93 353-458 12-106 (131)
138 2xm6_A Protein corresponding t 96.1 0.24 8E-06 51.9 18.9 96 317-421 94-216 (490)
139 3mkr_A Coatomer subunit epsilo 96.1 0.11 3.6E-06 51.3 15.2 94 355-458 132-226 (291)
140 3q49_B STIP1 homology and U bo 96.1 0.073 2.5E-06 44.6 12.1 93 355-460 11-105 (137)
141 3k9i_A BH0479 protein; putativ 96.1 0.014 4.8E-07 48.7 7.3 87 329-422 4-91 (117)
142 1p5q_A FKBP52, FK506-binding p 96.0 0.12 4E-06 52.1 15.2 95 359-460 153-258 (336)
143 3n71_A Histone lysine methyltr 96.0 0.16 5.3E-06 54.7 16.7 103 355-457 312-418 (490)
144 3qwp_A SET and MYND domain-con 96.0 0.028 9.6E-07 59.4 10.7 100 324-424 296-403 (429)
145 2fbn_A 70 kDa peptidylprolyl i 96.0 0.055 1.9E-06 49.2 11.4 92 362-460 48-150 (198)
146 1kt0_A FKBP51, 51 kDa FK506-bi 96.0 0.051 1.7E-06 57.4 12.7 92 325-422 278-381 (457)
147 2l6j_A TPR repeat-containing p 96.0 0.004 1.4E-07 50.4 3.2 62 356-423 7-69 (111)
148 2e2e_A Formate-dependent nitri 95.9 0.066 2.3E-06 47.5 11.5 115 329-460 24-143 (177)
149 1kt0_A FKBP51, 51 kDa FK506-bi 95.9 0.14 4.9E-06 53.9 15.9 98 356-460 272-379 (457)
150 2e2e_A Formate-dependent nitri 95.9 0.068 2.3E-06 47.4 11.4 93 320-422 49-145 (177)
151 2pzi_A Probable serine/threoni 95.9 0.061 2.1E-06 59.8 13.4 89 355-457 469-559 (681)
152 3rjv_A Putative SEL1 repeat pr 95.8 0.093 3.2E-06 48.8 12.7 129 317-457 33-193 (212)
153 1na0_A Designed protein CTPR3; 95.8 0.17 5.8E-06 40.6 12.8 95 353-459 9-104 (125)
154 4g1t_A Interferon-induced prot 95.8 0.014 4.8E-07 60.1 7.4 187 320-520 252-455 (472)
155 2dba_A Smooth muscle cell asso 95.8 0.075 2.6E-06 44.7 10.9 87 364-460 40-127 (148)
156 2pzi_A Probable serine/threoni 95.8 0.068 2.3E-06 59.4 13.3 87 329-422 405-497 (681)
157 2lni_A Stress-induced-phosphop 95.8 0.063 2.2E-06 44.2 10.0 92 354-458 17-110 (133)
158 3mkr_A Coatomer subunit epsilo 95.8 0.4 1.4E-05 47.0 17.5 27 395-421 133-159 (291)
159 1wao_1 Serine/threonine protei 95.7 0.011 3.9E-07 63.0 6.2 118 325-457 16-135 (477)
160 2kck_A TPR repeat; tetratricop 95.7 0.057 1.9E-06 42.9 9.0 91 357-460 10-105 (112)
161 2h6f_A Protein farnesyltransfe 95.6 0.3 1E-05 50.5 16.6 123 321-460 103-228 (382)
162 2c2l_A CHIP, carboxy terminus 95.3 0.064 2.2E-06 52.5 9.8 94 320-423 9-103 (281)
163 2l6j_A TPR repeat-containing p 95.3 0.1 3.4E-06 41.8 9.4 92 321-416 10-102 (111)
164 1hxi_A PEX5, peroxisome target 95.3 0.14 4.9E-06 43.2 10.6 91 356-459 21-112 (121)
165 2ooe_A Cleavage stimulation fa 95.2 0.18 6.1E-06 53.4 13.6 94 355-459 323-418 (530)
166 1ihg_A Cyclophilin 40; ppiase 95.2 0.15 5E-06 52.4 12.4 92 362-460 233-335 (370)
167 3urz_A Uncharacterized protein 95.1 0.3 1E-05 45.0 13.3 100 354-460 6-116 (208)
168 3qou_A Protein YBBN; thioredox 95.1 0.17 5.7E-06 49.5 12.0 29 394-422 221-249 (287)
169 3qww_A SET and MYND domain-con 95.1 0.19 6.6E-06 53.1 13.2 92 366-457 312-407 (433)
170 2kat_A Uncharacterized protein 94.9 0.2 7E-06 41.0 10.4 82 333-424 3-85 (115)
171 2r5s_A Uncharacterized protein 94.7 0.11 3.8E-06 46.3 8.9 74 371-457 93-169 (176)
172 4f3v_A ESX-1 secretion system 94.7 0.11 3.9E-06 51.9 9.6 132 316-458 99-234 (282)
173 2h6f_A Protein farnesyltransfe 94.7 0.23 7.7E-06 51.4 12.2 91 322-422 138-230 (382)
174 3qwp_A SET and MYND domain-con 94.6 0.22 7.6E-06 52.4 12.2 104 354-457 289-396 (429)
175 3e4b_A ALGK; tetratricopeptide 94.4 1 3.4E-05 47.1 16.7 75 366-458 265-348 (452)
176 1klx_A Cysteine rich protein B 94.4 0.23 8E-06 43.1 9.9 84 359-458 31-123 (138)
177 2ooe_A Cleavage stimulation fa 94.3 0.41 1.4E-05 50.7 13.5 126 320-460 326-453 (530)
178 3ma5_A Tetratricopeptide repea 94.2 0.41 1.4E-05 38.7 10.5 64 355-424 9-73 (100)
179 2if4_A ATFKBP42; FKBP-like, al 94.1 0.084 2.9E-06 53.3 7.3 86 331-422 195-294 (338)
180 3ma5_A Tetratricopeptide repea 94.0 0.33 1.1E-05 39.3 9.5 67 320-390 12-79 (100)
181 2if4_A ATFKBP42; FKBP-like, al 94.0 0.23 7.7E-06 50.1 10.2 85 367-458 194-290 (338)
182 1na3_A Designed protein CTPR2; 93.9 0.35 1.2E-05 37.1 9.1 64 353-422 9-73 (91)
183 2r5s_A Uncharacterized protein 93.9 0.4 1.4E-05 42.6 10.6 120 320-457 11-133 (176)
184 1zu2_A Mitochondrial import re 93.6 0.6 2.1E-05 42.6 11.3 53 368-426 62-125 (158)
185 3qou_A Protein YBBN; thioredox 93.5 0.94 3.2E-05 44.0 13.6 53 324-380 126-179 (287)
186 2v5f_A Prolyl 4-hydroxylase su 93.4 0.34 1.2E-05 40.0 8.7 71 352-422 5-76 (104)
187 2c2l_A CHIP, carboxy terminus 93.2 0.65 2.2E-05 45.1 11.6 92 356-460 8-100 (281)
188 2kc7_A BFR218_protein; tetratr 93.0 0.45 1.6E-05 37.5 8.6 62 356-422 4-65 (99)
189 4b4t_R RPN7, 26S proteasome re 92.9 0.24 8.2E-06 52.2 8.5 107 393-525 132-239 (429)
190 3mkq_A Coatomer beta'-subunit; 92.8 1.1 3.7E-05 49.4 14.0 102 355-460 683-791 (814)
191 1zu2_A Mitochondrial import re 92.7 0.31 1.1E-05 44.5 7.9 106 318-423 18-142 (158)
192 2kc7_A BFR218_protein; tetratr 92.7 0.39 1.3E-05 37.9 7.7 62 321-385 6-68 (99)
193 2kat_A Uncharacterized protein 92.4 0.73 2.5E-05 37.5 9.3 64 320-387 24-88 (115)
194 1b89_A Protein (clathrin heavy 91.7 1 3.5E-05 47.9 11.6 88 317-419 137-234 (449)
195 3k9i_A BH0479 protein; putativ 91.6 0.8 2.7E-05 37.7 8.7 96 317-417 5-109 (117)
196 1na3_A Designed protein CTPR2; 91.5 1.4 4.8E-05 33.5 9.6 60 320-383 14-74 (91)
197 4b4t_P 26S proteasome regulato 91.0 4.7 0.00016 42.5 15.9 176 320-520 61-243 (445)
198 2wpv_A GET4, UPF0363 protein Y 90.2 6.9 0.00024 39.5 15.6 179 323-520 21-213 (312)
199 3e4b_A ALGK; tetratricopeptide 90.0 2.8 9.7E-05 43.6 13.1 122 317-457 232-383 (452)
200 1b89_A Protein (clathrin heavy 89.6 0.38 1.3E-05 51.2 6.0 21 500-520 212-232 (449)
201 3mv2_B Coatomer subunit epsilo 89.5 6.5 0.00022 39.6 14.7 130 357-520 104-236 (310)
202 1wao_1 Serine/threonine protei 89.5 0.92 3.2E-05 48.0 8.9 82 365-459 19-101 (477)
203 3lpz_A GET4 (YOR164C homolog); 89.4 10 0.00034 38.7 16.1 172 326-520 23-212 (336)
204 4b4t_R RPN7, 26S proteasome re 89.2 2.8 9.7E-05 43.8 12.3 128 320-448 136-263 (429)
205 3mv2_B Coatomer subunit epsilo 88.5 6.4 0.00022 39.7 13.9 126 320-457 105-236 (310)
206 4e6h_A MRNA 3'-END-processing 87.8 6.1 0.00021 44.1 14.4 128 320-459 383-531 (679)
207 4e6h_A MRNA 3'-END-processing 87.3 8 0.00027 43.1 15.0 132 320-460 348-498 (679)
208 4f3v_A ESX-1 secretion system 85.4 2.8 9.6E-05 41.7 9.0 65 353-420 171-236 (282)
209 3txn_A 26S proteasome regulato 84.7 26 0.00089 36.4 16.4 99 358-456 104-205 (394)
210 1wfd_A Hypothetical protein 15 84.6 8.9 0.0003 31.5 10.4 61 352-412 15-79 (93)
211 2wm9_A Dedicator of cytokinesi 84.3 3.9 0.00013 43.1 10.1 104 320-424 16-140 (428)
212 2yin_A DOCK2, dedicator of cyt 83.9 1.9 6.4E-05 45.7 7.4 50 374-423 94-144 (436)
213 3mkq_A Coatomer beta'-subunit; 83.0 15 0.00051 40.1 14.6 66 392-457 681-761 (814)
214 2v6x_A Vacuolar protein sortin 80.4 14 0.00048 29.6 9.9 57 352-408 13-73 (85)
215 2cpt_A SKD1 protein, vacuolar 80.0 9.7 0.00033 32.8 9.2 28 356-383 22-49 (117)
216 4a5x_A MITD1, MIT domain-conta 79.9 14 0.00048 29.9 9.7 56 352-407 16-75 (86)
217 4b4t_P 26S proteasome regulato 78.8 50 0.0017 34.5 16.3 104 321-424 143-250 (445)
218 2wpv_A GET4, UPF0363 protein Y 77.2 30 0.001 34.8 13.3 145 316-460 47-216 (312)
219 2w2u_A Hypothetical P60 katani 76.1 9.1 0.00031 30.9 7.4 32 352-383 19-50 (83)
220 3ffl_A Anaphase-promoting comp 75.5 49 0.0017 30.3 13.8 103 356-458 24-148 (167)
221 3mkq_B Coatomer subunit alpha; 75.3 24 0.00082 32.6 11.0 90 365-459 47-142 (177)
222 2wm9_A Dedicator of cytokinesi 74.5 16 0.00054 38.4 10.8 42 391-432 87-128 (428)
223 2v6y_A AAA family ATPase, P60 70.5 14 0.00046 29.8 7.2 32 352-383 11-42 (83)
224 2wb7_A PT26-6P; extra chromoso 69.9 21 0.00073 38.1 10.3 9 78-86 28-36 (526)
225 3ly7_A Transcriptional activat 69.3 59 0.002 33.5 13.4 57 394-457 279-335 (372)
226 2v5f_A Prolyl 4-hydroxylase su 67.5 23 0.00079 28.5 8.3 58 327-384 17-78 (104)
227 3ffl_A Anaphase-promoting comp 61.3 97 0.0033 28.2 14.3 90 329-418 34-148 (167)
228 3mkq_B Coatomer subunit alpha; 60.0 62 0.0021 29.8 10.4 22 499-520 93-114 (177)
229 3ly7_A Transcriptional activat 59.6 29 0.001 35.8 8.9 50 365-421 290-339 (372)
230 4h7y_A Dual specificity protei 54.9 62 0.0021 29.4 9.1 82 369-457 36-119 (161)
231 3bee_A Putative YFRE protein; 50.5 61 0.0021 25.8 7.8 47 368-420 25-71 (93)
232 2ff4_A Probable regulatory pro 49.5 1.1E+02 0.0039 30.9 11.6 61 394-460 173-233 (388)
233 4h7y_A Dual specificity protei 48.5 1.6E+02 0.0053 26.7 11.1 99 316-420 11-122 (161)
234 1jb0_J Photosystem 1 reaction 46.1 8.5 0.00029 27.0 1.5 17 41-58 21-37 (41)
235 4a5x_A MITD1, MIT domain-conta 45.8 32 0.0011 27.7 5.3 33 390-423 15-47 (86)
236 1wfd_A Hypothetical protein 15 45.5 92 0.0031 25.3 8.1 36 368-404 12-47 (93)
237 2yin_A DOCK2, dedicator of cyt 45.3 42 0.0014 35.2 7.5 85 320-404 40-145 (436)
238 3u64_A Protein TP_0956; tetrat 44.7 2.5E+02 0.0085 28.0 13.4 101 313-420 144-268 (301)
239 4fhn_B Nucleoporin NUP120; pro 44.5 27 0.00094 41.0 6.6 102 316-418 837-964 (1139)
240 2cpt_A SKD1 protein, vacuolar 43.7 59 0.002 27.8 6.9 21 404-424 30-50 (117)
241 2w2u_A Hypothetical P60 katani 43.6 62 0.0021 25.9 6.6 31 369-400 17-47 (83)
242 4gq2_M Nucleoporin NUP120; bet 42.2 49 0.0017 38.2 8.1 72 351-422 839-927 (950)
243 2wb7_A PT26-6P; extra chromoso 40.6 95 0.0032 33.2 9.1 32 389-421 485-516 (526)
244 4g26_A Pentatricopeptide repea 40.1 1.7E+02 0.0059 30.7 11.5 125 320-458 31-166 (501)
245 2v6y_A AAA family ATPase, P60 39.9 79 0.0027 25.1 6.8 21 403-423 22-42 (83)
246 2uy1_A Cleavage stimulation fa 38.9 1.2E+02 0.0041 31.8 10.0 118 320-458 291-410 (493)
247 4gq2_M Nucleoporin NUP120; bet 32.2 35 0.0012 39.4 4.7 71 313-383 832-928 (950)
248 3nkh_A Integrase; alpha-fold, 29.4 25 0.00086 32.5 2.5 38 13-50 3-40 (244)
249 2wsc_J PSAJ, PSI-J, photosyste 28.8 13 0.00046 26.4 0.3 13 45-58 25-37 (44)
250 2uy1_A Cleavage stimulation fa 28.4 5.2E+02 0.018 26.8 13.6 27 392-418 286-312 (493)
251 2crb_A Nuclear receptor bindin 25.0 97 0.0033 25.6 4.8 32 353-384 15-47 (97)
252 2ff4_A Probable regulatory pro 23.6 3.4E+02 0.012 27.3 10.0 89 329-423 129-236 (388)
253 2grr_B RAN GTPase-activating p 22.3 28 0.00096 31.9 1.2 21 35-55 115-135 (170)
254 4fhn_B Nucleoporin NUP120; pro 20.4 58 0.002 38.2 3.7 70 352-421 842-928 (1139)
No 1
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.70 E-value=1.1e-15 Score=153.71 Aligned_cols=193 Identities=22% Similarity=0.233 Sum_probs=156.8
Q ss_pred CHHHHHHHHHHHhc-------hHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC
Q psy11025 317 KPDAALTLYSRAAD-------VAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED 386 (535)
Q Consensus 317 K~D~AA~lYekAA~-------~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg 386 (535)
.+++|+++|.+||+ +.+|..+|.+|..++.+ .+..++.+|..++.+|... ++++|+++|++|++++...|
T Consensus 31 ~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 110 (307)
T 2ifu_A 31 DYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG 110 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Confidence 45599999999876 68999999999999976 4567999999999999986 59999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCC
Q psy11025 387 NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPE 466 (535)
Q Consensus 387 r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~ 466 (535)
.+..++.++..+|.++.. ++|++|++.|+++.+++...+.......++..+..++...|+...|+..|++...
T Consensus 111 ~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------ 183 (307)
T 2ifu_A 111 TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKS------ 183 (307)
T ss_dssp CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------
T ss_pred CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------
Confidence 999999999999999999 9999999999999999876544434444444444556667888889999987322
Q ss_pred ccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH---hcCCCCchhhhcc
Q psy11025 467 RCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE---WGNCCEAPEINSH 533 (535)
Q Consensus 467 f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~---~~~F~~s~E~~~~ 533 (535)
+......+.......+..|+|+++.||...|...+++ .|+|..++|+..+
T Consensus 184 -----------------~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~p~~~~~~e~~~l 236 (307)
T 2ifu_A 184 -----------------MYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPGFSGSEDCAAL 236 (307)
T ss_dssp -----------------HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTSTTSHHHHHH
T ss_pred -----------------HHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1112222445555678999999999999999999998 3999999987654
No 2
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.69 E-value=2.7e-15 Score=149.88 Aligned_cols=198 Identities=17% Similarity=0.179 Sum_probs=149.3
Q ss_pred cccCC----HHHHHHHHHHHhc-------hHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHH
Q psy11025 313 LEELK----PDAALTLYSRAAD-------VAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRA 378 (535)
Q Consensus 313 l~k~K----~D~AA~lYekAA~-------~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kA 378 (535)
+|+|| +++|+++|.+||+ +.+|..+|.+|..++.+ ++..++.+|..++.+|.+. ++++|+.+|.+|
T Consensus 24 ~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~A 103 (292)
T 1qqe_A 24 LFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENA 103 (292)
T ss_dssp HHSCCSHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCCCCccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 56787 4589999999986 68999999999999976 4566899999999999987 599999999999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 379 ADVAHGEDNYKQAAEYISRAARMCVRV-KEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 379 aely~~egr~~~Aa~~l~kaAel~e~~-~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
++++...|++..++.++..+|.++... ++|++|++.|+++.+++...+.......+...++.+++..|+...|...|++
T Consensus 104 l~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 183 (292)
T 1qqe_A 104 IQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSK 183 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999999999996 9999999999999998876543333333333334555666788889999998
Q ss_pred hhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH---h-cCCCCchhhhc
Q psy11025 458 WGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE---W-GNCCEAPEINS 532 (535)
Q Consensus 458 ~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~---~-~~F~~s~E~~~ 532 (535)
....+.+.. ... +. ....++..|+|++..||...|..++++ + |+|..++|+..
T Consensus 184 al~~~~~~~--------------~~~-------~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~ 240 (292)
T 1qqe_A 184 LIKSSMGNR--------------LSQ-------WS-LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 (292)
T ss_dssp HHHTTSSCT--------------TTG-------GG-HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHH
T ss_pred HHHHHhcCC--------------ccc-------HH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHH
Confidence 555322210 000 11 223357889999999999999999998 3 99999888754
No 3
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.32 E-value=5.1e-11 Score=119.55 Aligned_cols=162 Identities=29% Similarity=0.349 Sum_probs=133.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
.++.+|.+.+++.+|..+|.+|..++.+ .+..++.+|...+.+|...++++|+++|++|++++...|....++.++.+
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 3444555555577888888888888865 34568899999999998855999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
+|.++...|+|++|+++|+++.+.+.........+...+..++|++..||...|...|+++. .+|.|..++++.++.
T Consensus 161 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al---~~p~~~~~~e~~~l~ 237 (307)
T 2ifu_A 161 ASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY---SIPGFSGSEDCAALE 237 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT---TSTTSTTSHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh---CCCCCCCCHHHHHHH
Confidence 99999999999999999999999887665445555666777889999999999999999854 567788888888777
Q ss_pred cccccchh
Q psy11025 478 SLGKAGYH 485 (535)
Q Consensus 478 ~L~l~ay~ 485 (535)
.| +..|.
T Consensus 238 ~l-~~~~~ 244 (307)
T 2ifu_A 238 DL-LQAYD 244 (307)
T ss_dssp HH-HHHHH
T ss_pred HH-HHHHH
Confidence 76 55554
No 4
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.17 E-value=3.8e-10 Score=112.40 Aligned_cols=158 Identities=18% Similarity=0.182 Sum_probs=114.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEE--LKSDAALTLYSRAADVAHGEDNYKQAAEYI 395 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek--~~~~eAie~y~kAaely~~egr~~~Aa~~l 395 (535)
..+.+|.+.+++.+|..+|.+|..++.+. ...++.+|...+.+|.. .++++|+.+|++|++++...+....++.++
T Consensus 82 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~ 161 (292)
T 1qqe_A 82 EAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCF 161 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 44555555556778888888888887653 44578899999999987 459999999999999999998888899999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccc
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQESEHL-LAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSS 474 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~-~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~ 474 (535)
.++|.++...|+|++|+++|+++.+........ ......++..++|++..||...|...|+++.. .+|.|..++++.
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~--l~p~~~~~~~~~ 239 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS--EDPNFADSRESN 239 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC--C---------HH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCCCcHHHH
Confidence 999999999999999999999998765433211 11222333345788889999999999998543 466677777666
Q ss_pred ccccc
Q psy11025 475 FSFSL 479 (535)
Q Consensus 475 ~l~~L 479 (535)
++..|
T Consensus 240 ~l~~l 244 (292)
T 1qqe_A 240 FLKSL 244 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 5
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.70 E-value=1.4e-06 Score=88.97 Aligned_cols=177 Identities=12% Similarity=0.074 Sum_probs=133.7
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCc-HHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDN-YKQAAEYIS 396 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr-~~~Aa~~l~ 396 (535)
-+..|...+++.+|...|.+|....... +..-+.++...|.++...+ +++|+++|.+|.+++...+. ...-+.++.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 188 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHS 188 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 4556667788999999999998887653 3346788888898888764 99999999999999998876 677789999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccc
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFS 476 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l 476 (535)
.+|.++...|+|++|++.|+++.+.+...+.....+.....++.|+...|+...|...|++.-..
T Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~--------------- 253 (383)
T 3ulq_A 189 LFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV--------------- 253 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---------------
Confidence 99999999999999999999999888765543344444444567777889998899999873221
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 477 FSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 477 ~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.......+.........+.|++..|+...|...+++
T Consensus 254 --------~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 254 --------FEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSK 289 (383)
T ss_dssp --------HHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------HHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 111111112234456678888888999888888776
No 6
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.67 E-value=4e-06 Score=85.23 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=101.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
-+.+|...+++.+|...|.+|...+... ...-+.++...+.+|... ++++|+.+|.+|.+++...+....-+.++..
T Consensus 92 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 171 (411)
T 4a1s_A 92 LGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYN 171 (411)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 3455555666778888888887776542 334566777777777765 4999999999999998887777778889999
Q ss_pred HHHHHHHhhh-----------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 398 AARMCVRVKE-----------------FDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 398 aAel~e~~~~-----------------y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
+|.++...++ |++|+++|++..++...................+++..|+...|...|++
T Consensus 172 l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 248 (411)
T 4a1s_A 172 LGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQE 248 (411)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 9999999999 99999999888777655443333333344445666777888889888886
No 7
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.66 E-value=6.2e-06 Score=79.68 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=102.4
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
-+.+|...+++.+|...|.+|...... .+..-+.++...+.++... ++++|+++|.+|.+++...+....-+.++..
T Consensus 49 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 128 (338)
T 3ro2_A 49 LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYN 128 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 455555566677888888888777654 3334567777778887765 4999999999999999888888888889999
Q ss_pred HHHHHHHhhh--------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 398 AARMCVRVKE--------------------FDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 398 aAel~e~~~~--------------------y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
+|.++...++ |++|+++|++.....................+.+.+..|+...|...|++
T Consensus 129 l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 208 (338)
T 3ro2_A 129 LGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQ 208 (338)
T ss_dssp HHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999 99999999988777655443333333333344566667888888888886
No 8
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.64 E-value=4.9e-06 Score=83.60 Aligned_cols=167 Identities=13% Similarity=0.041 Sum_probs=124.6
Q ss_pred hHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhh
Q psy11025 331 VAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 331 ~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~ 407 (535)
+.+|...|.+|..+.... ...-+.++...+.++... ++++|+.+|.+|.+++...+.....+.++...|.++...++
T Consensus 163 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 242 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 242 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 667777777777776553 344667788888888765 49999999999999999988888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhh
Q psy11025 408 FDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQE 487 (535)
Q Consensus 408 y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~ 487 (535)
|++|+++|++..+.....+...........++.+++..|+...|...|++... +...
T Consensus 243 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~-----------------------~~~~ 299 (406)
T 3sf4_A 243 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA-----------------------IAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------------------HHHH
T ss_pred hHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH-----------------------HHHh
Confidence 99999999999888766543333334444445667778898889888886222 1111
Q ss_pred hhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 488 SEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 488 ~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
..............+.|++..||...|...+++
T Consensus 300 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 332 (406)
T 3sf4_A 300 LNDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 332 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 222333444556778899999999999888876
No 9
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.64 E-value=4.6e-06 Score=84.80 Aligned_cols=178 Identities=13% Similarity=0.046 Sum_probs=129.8
Q ss_pred HHHHHHHHHhc-----------------hHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHH
Q psy11025 320 AALTLYSRAAD-----------------VAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRAA 379 (535)
Q Consensus 320 ~AA~lYekAA~-----------------~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAa 379 (535)
.-+.+|...++ +.+|...|.+|..+... .+..-+.++...+.++... ++++|+.+|++|.
T Consensus 171 ~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 250 (411)
T 4a1s_A 171 NLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERL 250 (411)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 45566667777 66666667766666543 3344566777778888765 4999999999999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 380 DVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 380 ely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
+++...+.....+.++...|.++...++|++|+++|+++.+.................+..+++..|+...|...|++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 330 (411)
T 4a1s_A 251 RIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHL 330 (411)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99988877788888999999999999999999999999988876543333333333444566777889888999988632
Q ss_pred hccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 460 NCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 460 ~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
. +.................+.|++..||.-.|...+++
T Consensus 331 ~-----------------------~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 368 (411)
T 4a1s_A 331 A-----------------------IAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQ 368 (411)
T ss_dssp H-----------------------HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred H-----------------------HHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 2 1112222333444557778999999999999988876
No 10
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.63 E-value=6.5e-06 Score=79.56 Aligned_cols=167 Identities=13% Similarity=0.052 Sum_probs=122.8
Q ss_pred hHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhh
Q psy11025 331 VAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 331 ~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~ 407 (535)
+.+|...|.+|...... ....-+.++...+.++... ++++|+.+|++|.+++...+....-+.++...|.++...++
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 238 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 238 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC
Confidence 66666777777666543 3334566777777777664 59999999999999998888788888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhh
Q psy11025 408 FDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQE 487 (535)
Q Consensus 408 y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~ 487 (535)
|++|+++|++..+....................+.+..|+...|...|++... +...
T Consensus 239 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~-----------------------~~~~ 295 (338)
T 3ro2_A 239 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA-----------------------IAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------------------HHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-----------------------HHHh
Confidence 99999999999888766543333333434444566778888889888886222 1112
Q ss_pred hhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 488 SEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 488 ~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
..............+.+++..||...|...+++
T Consensus 296 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 328 (338)
T 3ro2_A 296 LKDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 328 (338)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 222333444556778999999999999999987
No 11
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.63 E-value=5.5e-06 Score=83.25 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=103.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
-+.+|...+++.+|..+|.+|....... ...-+.++...+.++... ++++|+.+|.+|.+++...+.....+.++..
T Consensus 53 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 132 (406)
T 3sf4_A 53 LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYN 132 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 4455556666778888888887776543 334567777778888765 4999999999999999888777888889999
Q ss_pred HHHHHHHhhh--------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 398 AARMCVRVKE--------------------FDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 398 aAel~e~~~~--------------------y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
+|.++...++ |++|+++|++..+.+...+.....+.....++.+++..|+...|...|++
T Consensus 133 l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 212 (406)
T 3sf4_A 133 LGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQ 212 (406)
T ss_dssp HHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHH
T ss_pred HHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999999999 99999999998887766543333333444445566667888788888886
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.60 E-value=4.6e-06 Score=85.12 Aligned_cols=175 Identities=14% Similarity=0.059 Sum_probs=132.1
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCc-HHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDN-YKQAAEYISR 397 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr-~~~Aa~~l~k 397 (535)
+..|..-+++.+|...|.+|....... ...-+.++...|.+|-..+ +++|+.+|.+|.+++...+. ...-+.++..
T Consensus 108 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 187 (378)
T 3q15_A 108 GMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFV 187 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 344556677899999999998877653 3457788888898888764 99999999999999988765 5678899999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
+|.++...++|++|++.|+++.+.+...+.....+.....++.|+...|+...|...|++.-.
T Consensus 188 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~----------------- 250 (378)
T 3q15_A 188 IAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK----------------- 250 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-----------------
Confidence 999999999999999999999988766544334444444455677778888889999986222
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 478 SLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 478 ~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+......... ....+..+.+++..|+.-.|...+++
T Consensus 251 ------~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~ 286 (378)
T 3q15_A 251 ------VSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEE 286 (378)
T ss_dssp ------HHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------HHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 1111111222 34456778999999999999998887
No 13
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.56 E-value=9.2e-06 Score=82.89 Aligned_cols=198 Identities=16% Similarity=0.032 Sum_probs=141.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNR---EAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYI 395 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~---~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l 395 (535)
.-+.+|...+++.+|...|.+|.+++.+.+ ..-+.++...|.++...+ +++|+++|.+|.+++...+....-+.++
T Consensus 146 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 225 (378)
T 3q15_A 146 KVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISL 225 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 345566666778899999999999987643 346888888899888765 9999999999999999888888899999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCC---CCcccccc
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEA---PERCESGS 472 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~---~~f~~sre 472 (535)
..+|.++...++|++|+++|+++.+.+........ ......++.++...|+...|...|++.-..+.. +.+...
T Consensus 226 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-- 302 (378)
T 3q15_A 226 LNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKEL-- 302 (378)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHH--
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH--
Confidence 99999999999999999999999988765433222 223333445667778888899999885443322 111000
Q ss_pred ccccccc-----------cccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 473 SSFSFSL-----------GKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 473 ~~~l~~L-----------~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
...+..+ ....+.+....+..+..+....+.++...||...|...+++
T Consensus 303 ~~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~ 361 (378)
T 3q15_A 303 FLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRK 361 (378)
T ss_dssp HHHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 0000000 00112223334556666678889999999999999888876
No 14
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.55 E-value=9e-06 Score=73.95 Aligned_cols=150 Identities=15% Similarity=0.082 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Q psy11025 348 NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESE 426 (535)
Q Consensus 348 ~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e 426 (535)
.+..-+.++...+.++... ++++|+.+|.+|.+++...|.....+.++..+|.++...|+|++|+++|++..+.+....
T Consensus 21 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 100 (203)
T 3gw4_A 21 HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLP 100 (203)
T ss_dssp STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 4434466677777777665 599999999999999999998888899999999999999999999999999998876544
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHH
Q psy11025 427 -HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQ 505 (535)
Q Consensus 427 -~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~ 505 (535)
.....+.....+..+++..|+...|...|++... +.................+.|+
T Consensus 101 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----------------------~~~~~~~~~~~~~~~~~la~~~ 157 (203)
T 3gw4_A 101 EDPLAASANAYEVATVALHFGDLAGARQEYEKSLV-----------------------YAQQADDQVAIACAFRGLGDLA 157 (203)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----------------------HHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----------------------HHHhccchHHHHHHHHHHHHHH
Confidence 3323333334445666677888889888886221 1112222334445456778999
Q ss_pred hccCCHHHHHHHHHH
Q psy11025 506 LARGDTVAAEKAFKE 520 (535)
Q Consensus 506 L~~gD~V~A~~a~~~ 520 (535)
+..||...|...+++
T Consensus 158 ~~~g~~~~A~~~~~~ 172 (203)
T 3gw4_A 158 QQEKNLLEAQQHWLR 172 (203)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHCcCHHHHHHHHHH
Confidence 999999999888876
No 15
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.52 E-value=1.2e-05 Score=69.04 Aligned_cols=139 Identities=13% Similarity=0.049 Sum_probs=109.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYIS 396 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ 396 (535)
.-+.+|...+++.+|...|.+|.....+ ....-+.++...+.++... ++++|+.+|++|.+++...+.....+.++.
T Consensus 14 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 93 (164)
T 3ro3_A 14 NLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCY 93 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 3455666667789999999999998865 3445667788888888765 499999999999999988888888889999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
.+|.++...++|++|+++|++..+.................+..+++..|+...|...|++.
T Consensus 94 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 155 (164)
T 3ro3_A 94 SLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 155 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 99999999999999999999998887665433333333333445667778888898888863
No 16
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.49 E-value=1.7e-05 Score=68.20 Aligned_cols=147 Identities=13% Similarity=0.003 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHH
Q psy11025 351 AASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLL 429 (535)
Q Consensus 351 ~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~ 429 (535)
.-+.++...+.++... ++++|+.+|.+|.+++...+.....+.++..+|.++...++|++|+++|++..+.+...+...
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 3456667777777654 599999999999999988887888888999999999999999999999999988876654333
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccC
Q psy11025 430 AIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARG 509 (535)
Q Consensus 430 ~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~g 509 (535)
........+..++...++...|...|++.-. +.................+.|++..|
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-----------------------~~~~~~~~~~~~~~~~~la~~~~~~g 143 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA-----------------------IAQELKDRIGEGRACWSLGNAYTALG 143 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------------------HHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-----------------------HHHHccchHhHHHHHHHHHHHHHHcc
Confidence 3333444445667778888889888886322 11112223334455577789999999
Q ss_pred CHHHHHHHHHH
Q psy11025 510 DTVAAEKAFKE 520 (535)
Q Consensus 510 D~V~A~~a~~~ 520 (535)
|...|...+++
T Consensus 144 ~~~~A~~~~~~ 154 (164)
T 3ro3_A 144 NHDQAMHFAEK 154 (164)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999998876
No 17
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.47 E-value=1.9e-05 Score=80.46 Aligned_cols=199 Identities=12% Similarity=0.058 Sum_probs=139.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRN---REAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYI 395 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~---~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l 395 (535)
.-+.+|...+++.+|...|.+|..++.+. ...-+.++...|.+|...+ +++|+++|.+|.+++...+....-+.++
T Consensus 148 ~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 227 (383)
T 3ulq_A 148 KMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTL 227 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 34566677777899999999999998764 3346788888888888764 9999999999999999988888889999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccC---CCCcccc--
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCE---APERCES-- 470 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~---~~~f~~s-- 470 (535)
..+|.++...|+|++|++.|+++.+.+...............++.+++..|+...|...|++.-..+. ++.+...
T Consensus 228 ~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 307 (383)
T 3ulq_A 228 YNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFE 307 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999988765433111122333344566677888889888887333221 1111000
Q ss_pred ---------ccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 471 ---------GSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 471 ---------re~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
........ ...+.+...............+.++...||...|...+++
T Consensus 308 ~l~~~~~~~~~~~~~~~--al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~ 364 (383)
T 3ulq_A 308 FLKSLYLSGPDEEAIQG--FFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLK 364 (383)
T ss_dssp HHHHHHTSSCCHHHHHH--HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHH--HHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 00000000 0112223344555555667889999999999999998887
No 18
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.45 E-value=1.7e-05 Score=76.41 Aligned_cols=180 Identities=15% Similarity=0.141 Sum_probs=126.7
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC--CcHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR----NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE--DNYKQAA 392 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~----~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e--gr~~~Aa 392 (535)
.-+.+|...+++.+|...|.+|...+.+ ....-+.++...+.++... ++++|+.+|.+|++++... +....-.
T Consensus 32 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 111 (311)
T 3nf1_A 32 NLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVA 111 (311)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 4566777778899999999999998764 2344567788888888765 4999999999999998554 3345667
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccc
Q psy11025 393 EYISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCES 470 (535)
Q Consensus 393 ~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~s 470 (535)
.++..+|.++...++|++|+++|++..+.+... ............++.+.+..++...|...|++....+.
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------- 184 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQ------- 184 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-------
Confidence 888899999999999999999999998876443 11112222223334566677888889999887322100
Q ss_pred ccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 471 GSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 471 re~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
... ..............+.|++..|+...|...+++
T Consensus 185 ------------~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 185 ------------TKL--GPDDPNVAKTKNNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp ------------HTS--CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ------------HHh--CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 000 000112233346678899999999999988876
No 19
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.44 E-value=3.2e-05 Score=70.24 Aligned_cols=138 Identities=11% Similarity=0.094 Sum_probs=110.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC-cHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED-NYKQAAEYI 395 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg-r~~~Aa~~l 395 (535)
.-+.+|...+++.+|...|.+|..++... ...-+.++...+.++... ++++|+.+|.+|.+++...+ .....+.++
T Consensus 31 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 110 (203)
T 3gw4_A 31 MLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANA 110 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHH
Confidence 45667777788999999999999988763 444677788888888775 59999999999999998887 666788899
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
..+|.++...|+|++|+..|++..+.....+.....+.....+..+++..|+...|...|++
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 172 (203)
T 3gw4_A 111 YEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLR 172 (203)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 99999999999999999999999888765544333333334445667778898889888876
No 20
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.42 E-value=1.6e-05 Score=76.59 Aligned_cols=200 Identities=14% Similarity=0.085 Sum_probs=122.8
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC--CcHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRN----REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE--DNYKQAA 392 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~----~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e--gr~~~Aa 392 (535)
.-+.+|...+++.+|...|.+|...+.+. ...-+.++...+.++... ++++|+.+|.+|.+++... +....-.
T Consensus 74 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (311)
T 3nf1_A 74 ILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVA 153 (311)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 34556666666778888888888776442 233566777777777765 4999999999999997543 3345667
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccc
Q psy11025 393 EYISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCES 470 (535)
Q Consensus 393 ~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~s 470 (535)
..+..+|.++...++|++|+++|++..+.+... ............+..+++..|+...|...|++....+....+...
T Consensus 154 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 233 (311)
T 3nf1_A 154 KQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSV 233 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 788889999999999999999999998876543 111111122222334555667887798888874332110000000
Q ss_pred ---------------------ccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 471 ---------------------GSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 471 ---------------------re~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
......... +..+.................+.|++..|+...|...+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 303 (311)
T 3nf1_A 234 DDENKPIWMHAEEREECKGKQKDGTSFGEY-GGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEA 303 (311)
T ss_dssp ----CCHHHHHHHHHHC-------CCSCCC-C---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCchhhHHHHHHH-HHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 000000000 1111111112233444557789999999999999999886
No 21
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.38 E-value=2.8e-05 Score=73.47 Aligned_cols=200 Identities=14% Similarity=0.068 Sum_probs=122.9
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC--cHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN----REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED--NYKQAAE 393 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~----~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg--r~~~Aa~ 393 (535)
-+.+|...+++.+|..+|.+|...+.+. ...-+.++...|.++... ++++|+++|.+|.+++...+ ....-..
T Consensus 49 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 128 (283)
T 3edt_B 49 LALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAK 128 (283)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 4555556666788888888888877432 234566777788888765 49999999999999975431 1245567
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcc--c
Q psy11025 394 YISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERC--E 469 (535)
Q Consensus 394 ~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~--~ 469 (535)
.+..+|.++...++|++|+++|++..+.+... ............+..+++..|+...|...|++....+....+. .
T Consensus 129 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~ 208 (283)
T 3edt_B 129 QLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVN 208 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 88899999999999999999999998886442 1111111222223455666788888999988744321100000 0
Q ss_pred ccccccccccc------------------ccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 470 SGSSSFSFSLG------------------KAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 470 sre~~~l~~L~------------------l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.....+...++ ...+.................+.++...|+...|...+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 277 (283)
T 3edt_B 209 GDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDC 277 (283)
T ss_dssp SSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 00000000000 0000000011233344457789999999999999999876
No 22
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.29 E-value=3.5e-05 Score=72.84 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHH
Q psy11025 331 VAHGEDNYKQAAEYISR----NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE--DNYKQAAEYISRAARMCV 403 (535)
Q Consensus 331 ~~eAa~af~kAA~~y~~----~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e--gr~~~Aa~~l~kaAel~e 403 (535)
+.+|...|.+|...+.+ ....-+.++...|.++... ++++|+.+|.+|.+++... +....-+.++..+|.++.
T Consensus 17 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (283)
T 3edt_B 17 RGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG 96 (283)
T ss_dssp SSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 44455555555555532 2233456677777777765 4999999999999997554 334566778999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccc
Q psy11025 404 RVKEFDKAADLIRQEIGYHQES--EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGK 481 (535)
Q Consensus 404 ~~~~y~~Aie~ye~~~~~~~a~--e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l 481 (535)
..++|++|+++|+++.+.+... .........+..++.+....|+...|...|++.-..+.
T Consensus 97 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~------------------ 158 (283)
T 3edt_B 97 KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYA------------------ 158 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH------------------
T ss_pred HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH------------------
Confidence 9999999999999998886543 11112222233334566778888889999887322100
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 482 AGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 482 ~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
... ..............+.|++..|+...|...+++
T Consensus 159 -~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 194 (283)
T 3edt_B 159 -TRL--GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKE 194 (283)
T ss_dssp -HHS--CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred -Hhc--CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 000 000122233446778999999999999999876
No 23
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.27 E-value=6.7e-05 Score=71.02 Aligned_cols=183 Identities=10% Similarity=-0.081 Sum_probs=120.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|...|.++...+-.++. +..++...|.++.+. ++++|+..|.++++.+-....... .+-..
T Consensus 9 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~-~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~---a~~~~ 84 (225)
T 2yhc_A 9 ATAQQKLQDGNWRQAITQLEALDNRYPFGPY-SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDY---VMYMR 84 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH---HHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHH---HHHHH
Confidence 4556677778999999999999876544332 445666677777765 599999999999999877654322 23333
Q ss_pred HHHHH------------------HhhhHHHHHHHHHHHHHHHHHhhH-----------HHHHHHHHHHHHHHHHhcCCHH
Q psy11025 399 ARMCV------------------RVKEFDKAADLIRQEIGYHQESEH-----------LLAIGRLAVALVLVQLARGDTV 449 (535)
Q Consensus 399 Ael~e------------------~~~~y~~Aie~ye~~~~~~~a~e~-----------~~~a~rl~la~il~~L~~~D~v 449 (535)
|.++. ..+++++|+..|++..+.+-.... ........+..+.+.+..|+..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~ 164 (225)
T 2yhc_A 85 GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWV 164 (225)
T ss_dssp HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 33333 358999999999999766532211 1111111122334566678888
Q ss_pred HHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHh-cCCCCch
Q psy11025 450 AAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW-GNCCEAP 528 (535)
Q Consensus 450 aA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~~-~~F~~s~ 528 (535)
.|+..|+++.....+ ........+..+.|++..||...|...++.+ -..+.+.
T Consensus 165 ~A~~~~~~~l~~~p~--------------------------~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 165 AVVNRVEGMLRDYPD--------------------------TQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHHHHSTT--------------------------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHCcC--------------------------CCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCch
Confidence 899999874432111 0112233467799999999999999999984 6666666
Q ss_pred hhhc
Q psy11025 529 EINS 532 (535)
Q Consensus 529 E~~~ 532 (535)
|.--
T Consensus 219 ~~~~ 222 (225)
T 2yhc_A 219 EHHH 222 (225)
T ss_dssp CCTT
T ss_pred hhcc
Confidence 5543
No 24
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.26 E-value=3.5e-05 Score=75.90 Aligned_cols=178 Identities=8% Similarity=-0.085 Sum_probs=124.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREA--ASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYIS 396 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~--AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ 396 (535)
+.+..+...+++.+|...|.++.+.....++. -+..+...+.++... ++++|+.+|++|.++....+.....+.++.
T Consensus 80 ~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 80 DQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHH
Confidence 34555666678899999998887644334443 244454456666554 699999999999998666655556778999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccc
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSF 475 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~ 475 (535)
.+|.++...|+|++|+++|+++.+.+... ........++.-++.++...++...|...|++.-..
T Consensus 160 ~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~-------------- 225 (293)
T 3u3w_A 160 AIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI-------------- 225 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH--------------
Confidence 99999999999999999999998877654 333333334444456677788888898888862221
Q ss_pred cccccccchhhhhhhHHHHHHHHHHHHHHHhccC-CHHHHHHHHHH
Q psy11025 476 SFSLGKAGYHQESEHLLAIGRLAVALVLVQLARG-DTVAAEKAFKE 520 (535)
Q Consensus 476 l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~g-D~V~A~~a~~~ 520 (535)
..........+......|.|+...| +...|...+++
T Consensus 226 ---------~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~ 262 (293)
T 3u3w_A 226 ---------SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp ---------HHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ---------HHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 1111122233555678899999999 56888888876
No 25
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00026 Score=66.08 Aligned_cols=188 Identities=13% Similarity=0.097 Sum_probs=99.7
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED-NYKQAAEYISRA 398 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg-r~~~Aa~~l~ka 398 (535)
-+.+|.+.+++.+|..+|.++.... .+ +.++...+.++... ++++|+++|.+|+++....+ ....-...+...
T Consensus 11 ~g~~~~~~~~~~~A~~~~~~a~~~~-~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l 85 (258)
T 3uq3_A 11 EGNKFYKARQFDEAIEHYNKAWELH-KD----ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARI 85 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS-CC----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhh-cc----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHH
Confidence 3445555566777777777776665 32 23455556666554 37777777777777765442 344445666677
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHH-------------hh-------HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQE-------------SE-------HLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a-------------~e-------~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
|.++...++|++|++.|++..+.... .. ............+.+.+..|+...|...|++.
T Consensus 86 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 165 (258)
T 3uq3_A 86 GNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEM 165 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 77777777777777777766553110 00 00111112222334555667777777777764
Q ss_pred hhccCCCCccccccccccccc-----cccchhhhhhhHHH-------HHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 459 GNCCEAPERCESGSSSFSFSL-----GKAGYHQESEHLLA-------IGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 459 ~~~~~~~~f~~sre~~~l~~L-----~l~ay~~~~~~~~~-------~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.....+ .. .....+ ....|.+....+.. .....+..+.|++..|+...|...+++
T Consensus 166 ~~~~~~--~~-----~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 166 IKRAPE--DA-----RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp HHHCTT--CH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhcCcc--cH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 332211 10 001110 01111111111111 122335667888888888888888776
No 26
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=6.1e-05 Score=77.16 Aligned_cols=178 Identities=10% Similarity=0.042 Sum_probs=126.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNRE--AASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYIS 396 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~--~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ 396 (535)
.-+.+|.+.++|.+|.+.|.++...+...+. .++..+...+.++... ++++|+++|.++..+....++...-+.++.
T Consensus 60 ~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (434)
T 4b4t_Q 60 ELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSI 139 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 3578899999999999999999888766433 2344444445555544 499999999999999888776555678899
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccc
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFS 476 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l 476 (535)
+.|.++...|+|.+|+.++++........+-......+.+..+-+++..+|...|...|++.-.
T Consensus 140 ~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~---------------- 203 (434)
T 4b4t_Q 140 KLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAART---------------- 203 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH----------------
Confidence 9999999999999999999998766544221111122333334557778999999999876211
Q ss_pred ccccccchhhhh-hhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 477 FSLGKAGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 477 ~~L~l~ay~~~~-~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
....+ ......+......|+++.+.+|+-.|.+.+.+
T Consensus 204 -------~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~ 241 (434)
T 4b4t_Q 204 -------AANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFE 241 (434)
T ss_dssp -------HHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred -------HhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 00011 11344556667789999999999999888765
No 27
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.07 E-value=9.7e-05 Score=72.70 Aligned_cols=177 Identities=8% Similarity=-0.094 Sum_probs=117.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNRE--AASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~--~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
-+..|..-+++.+|.+.|.++.+.....+. .-...+...+.++... ++++|+++|.+|.++..........+.++..
T Consensus 81 ~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 2qfc_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 344455556788888888887665433332 1233344456666655 6999999999999987665545556789999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccc
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESEH-LLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFS 476 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e~-~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l 476 (535)
+|.++...++|++|+++|+++.+.+..... .........-++.+....|+...|...|++.-..+
T Consensus 161 lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~-------------- 226 (293)
T 2qfc_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS-------------- 226 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH--------------
Confidence 999999999999999999999877654311 11111223334456667788888999998732211
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHH-HHHHHH
Q psy11025 477 FSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAA-EKAFKE 520 (535)
Q Consensus 477 ~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A-~~a~~~ 520 (535)
.........+...+..|.|+...|+.-.| ...+++
T Consensus 227 ---------~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 227 ---------CRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp ---------HHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ---------HhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 00111112344457789999999999888 666665
No 28
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.02 E-value=0.00013 Score=70.08 Aligned_cols=137 Identities=12% Similarity=-0.009 Sum_probs=96.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|...|.++...+-.++ .+..++...|.++... ++++|+..|+++++++-.... ....+-..
T Consensus 20 ~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~-~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~---~~~a~~~l 95 (261)
T 3qky_A 20 ERAMEFYNQGKYDRAIEYFKAVFTYGRTHE-WAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR---VPQAEYER 95 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHGGGCSCST-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT---HHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCCCc-chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch---hHHHHHHH
Confidence 455566666789999999999876543332 2456777778887765 599999999999999876633 34567778
Q ss_pred HHHHHH--------hhhHHHHHHHHHHHHHHHHHhhHHHHH-----------HHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 399 ARMCVR--------VKEFDKAADLIRQEIGYHQESEHLLAI-----------GRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 399 Ael~e~--------~~~y~~Aie~ye~~~~~~~a~e~~~~a-----------~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
|.++.. .++|++|++.|++..+.+-.......+ ....+..+.+++..|+...|+..|+++.
T Consensus 96 g~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 175 (261)
T 3qky_A 96 AMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVF 175 (261)
T ss_dssp HHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 888888 899999999999998776432211111 0001223456677889888999998754
Q ss_pred h
Q psy11025 460 N 460 (535)
Q Consensus 460 ~ 460 (535)
.
T Consensus 176 ~ 176 (261)
T 3qky_A 176 D 176 (261)
T ss_dssp H
T ss_pred H
Confidence 3
No 29
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.91 E-value=0.00021 Score=67.40 Aligned_cols=111 Identities=21% Similarity=0.155 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCC
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGD 447 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D 447 (535)
+++|+.+|.+|+++.-.. ...+...|.++...|++++|++.|+++.+.....+..... +.+.+..|+
T Consensus 100 ~~~A~~~~~~al~~~P~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~l-------a~~~~~~g~ 166 (217)
T 2pl2_A 100 LEQALSVLKDAERVNPRY------APLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSAL-------AELYLSMGR 166 (217)
T ss_dssp HHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHH-------HHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHcCChHHHHHHHHHHHhcccchHHHHHH-------HHHHHHcCC
Confidence 667777777777664332 2345566677777788888888888877665111122222 234555677
Q ss_pred HHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 448 TVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 448 ~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
...|...|++.-.. +|.+ ....+..+.+++..||...|...+++
T Consensus 167 ~~~A~~~~~~al~~--~P~~---------------------------~~~~~~la~~~~~~g~~~~A~~~~~~ 210 (217)
T 2pl2_A 167 LDEALAQYAKALEQ--APKD---------------------------LDLRVRYASALLLKGKAEEAARAAAL 210 (217)
T ss_dssp HHHHHHHHHHHHHH--STTC---------------------------HHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHh--CCCC---------------------------hHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 77788888763321 1110 11235567888899999998887764
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.87 E-value=0.0012 Score=59.19 Aligned_cols=155 Identities=17% Similarity=0.103 Sum_probs=111.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+-|++.+|..+|.+|.+..-++ +.++..-|.++.+.+ +++|+..+.++....... ...+...
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~------~~~~~~~ 79 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADPNN----VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS------AEAYYIL 79 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh------HHHHHHH
Confidence 45677888888999999999998764333 235777788887754 999999999998876554 3456667
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
+.++...++++.|++.++++....... ...... +.+....|+...|+..|++.-.. +|..
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~l-------g~~~~~~g~~~~A~~~~~~~l~~--~p~~---------- 140 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIALNTVYADAYYKL-------GLVYDSMGEHDKAIEAYEKTISI--KPGF---------- 140 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH-------HHHHHHTTCHHHHHHHHHHHHHH--CTTC----------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHH-------HHHHHHhCCchhHHHHHHHHHHh--cchh----------
Confidence 888888899999999999987654332 122222 24555678888899999874331 1110
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 478 SLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 478 ~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.......|.|+...|+.-.|...+++
T Consensus 141 -----------------~~~~~~lg~~~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 141 -----------------IRAYQSIGLAYEGKGLRDEAVKYFKK 166 (184)
T ss_dssp -----------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------------hhHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 12235678999999999999999887
No 31
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.83 E-value=0.00018 Score=73.58 Aligned_cols=180 Identities=8% Similarity=0.049 Sum_probs=125.0
Q ss_pred CHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-------------HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHH
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYKQAAEYISRN-------------REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVA 382 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~kAA~~y~~~-------------~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely 382 (535)
+.++|-.++ +.+++.+|.+.|.++.+..... ...-.+++...+++|.+. ++++|+++|.++..++
T Consensus 7 ~l~~a~~l~-~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 7 KLEEARRLV-NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHH-HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHH-HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 445665554 4588999999999987755321 112345678888888775 5999999999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhcc
Q psy11025 383 HGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCC 462 (535)
Q Consensus 383 ~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~ 462 (535)
...++...+......++.++...+.+++|+++|++...+..........+++...++-+++..|++..|...+++....+
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~ 165 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREF 165 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 98887777777777777777778999999999999988776543211122233333455667788888988888743321
Q ss_pred CCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 463 EAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 463 ~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.. ..... ......+..+-+++..||+..|...+.+
T Consensus 166 ~~----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 200 (434)
T 4b4t_Q 166 KK----------------------LDDKP-SLVDVHLLESKVYHKLRNLAKSKASLTA 200 (434)
T ss_dssp TT----------------------SSCST-HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred Hh----------------------cccch-hHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 00011 1123346778999999999999999876
No 32
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.82 E-value=0.00054 Score=68.40 Aligned_cols=23 Identities=17% Similarity=0.088 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCCHHHHHHHHHH
Q psy11025 498 AVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 498 ~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
....+.|++..|+...|...+++
T Consensus 284 ~~~l~~~~~~~g~~~~A~~~~~~ 306 (365)
T 4eqf_A 284 RYNLGISCINLGAYREAVSNFLT 306 (365)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH
Confidence 35678888888999999888887
No 33
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.81 E-value=0.001 Score=62.87 Aligned_cols=183 Identities=13% Similarity=-0.015 Sum_probs=104.9
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|...+++.+|..+|.+|....... ..++...|.++... ++++|+.+|++|+++.... ...+...|
T Consensus 49 l~~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~la 118 (275)
T 1xnf_A 49 RGVLYDSLGLRALARNDFSQALAIRPDM----PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY------NYAHLNRG 118 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------THHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccc------cHHHHHHH
Confidence 3444555555666666676666543222 23455566666655 4999999999999986543 35677888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSL 479 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L 479 (535)
.++...|+|++|+++|++..+........... + .++ +..++...|...|++......+....-..-...+...
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~----~--~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDPFRSLW----L--YLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNI 191 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH----H--HHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSS
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCChHHHHH----H--HHH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhc
Confidence 89999999999999999987654333211111 1 111 3346666687777664332222110000000000000
Q ss_pred c----ccchhhhhhhH----HHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 480 G----KAGYHQESEHL----LAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 480 ~----l~ay~~~~~~~----~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+ +..+....... .......+..+.|++..||...|...+++
T Consensus 192 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 240 (275)
T 1xnf_A 192 SEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKL 240 (275)
T ss_dssp CHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 0 01111111111 12245557889999999999999999988
No 34
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.78 E-value=0.0013 Score=66.11 Aligned_cols=175 Identities=13% Similarity=0.004 Sum_probs=118.7
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN-REAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~-~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
+.++...+++.+|...+.+|....... +..-+.++...+.++-. .++++|..+|.+|..+....|.....+.++...|
T Consensus 21 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 100 (373)
T 1hz4_A 21 AQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQS 100 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445556677888999998887655322 22234455555555554 5699999999999999999988888888899999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHL--LAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~--~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
.++...|+|.+|++.|++........... ............+....|+...|...|++.-..+....
T Consensus 101 ~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~----------- 169 (373)
T 1hz4_A 101 EILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ----------- 169 (373)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC-----------
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC-----------
Confidence 99999999999999999998877543211 11111112223455667888889999887333221100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 478 SLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 478 ~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
... ........+.+++..||...|...+++
T Consensus 170 ------------~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~ 199 (373)
T 1hz4_A 170 ------------PQQ-QLQCLAMLIQCSLARGDLDNARSQLNR 199 (373)
T ss_dssp ------------GGG-GHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ------------cHH-HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 000 112234567788889999999888876
No 35
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.76 E-value=0.00023 Score=70.00 Aligned_cols=128 Identities=12% Similarity=0.015 Sum_probs=94.6
Q ss_pred chHHHHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHh
Q psy11025 330 DVAHGEDNYKQAAEYISRNR--EAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE-DNYKQAAEYISRAARMCVRV 405 (535)
Q Consensus 330 ~~~eAa~af~kAA~~y~~~~--~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e-gr~~~Aa~~l~kaAel~e~~ 405 (535)
++.+|...|.+|........ ...+.+|...+.+|... ++++|+.+|++|.+++... +....-+.++..+|.++...
T Consensus 130 ~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 46777777777776443322 23566788888888776 4999999999999998766 56677788999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHH
Q psy11025 406 KEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARG-DTVAAEKAFKE 457 (535)
Q Consensus 406 ~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~-D~vaA~~~~e~ 457 (535)
++|++|+++|+++.++....+.....+.++.-.+.|+...| +...|...|++
T Consensus 210 ~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~ 262 (293)
T 3u3w_A 210 SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 99999999999998887654432222333333446666777 44668888876
No 36
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.76 E-value=0.00082 Score=63.06 Aligned_cols=157 Identities=13% Similarity=0.150 Sum_probs=79.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|.+.+++.+|...|.++....... ..++...+.++... ++++|+++|.++.. .+....-...+...|
T Consensus 77 la~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~la 148 (252)
T 2ho1_A 77 LAVVFQTEMEPKLADEEYRKALASDSRN----ARVLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPERSRVFENLG 148 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCc----HHHHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCcccHHHHHHHH
Confidence 3444444455555555555554432222 12334444444443 36666666666655 111112234455566
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSL 479 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L 479 (535)
.++...+++++|+++|++..+...... ......+.+.+..|+...|...|++......+
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~--------------- 207 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRNQP------SVALEMADLLYKEREYVPARQYYDLFAQGGGQ--------------- 207 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC---------------
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcccH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---------------
Confidence 666666777777777766654432110 01111123344456666676666653221000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 480 GKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 480 ~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
........+.|+...||...|...+++
T Consensus 208 --------------~~~~~~~~~~~~~~~g~~~~A~~~~~~ 234 (252)
T 2ho1_A 208 --------------NARSLLLGIRLAKVFEDRDTAASYGLQ 234 (252)
T ss_dssp --------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------cHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 011124456777888999999999887
No 37
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.75 E-value=0.0011 Score=64.60 Aligned_cols=120 Identities=8% Similarity=-0.029 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCcHHHHHHHH---------HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy11025 367 KSDAALTLYSRAADVAHGEDNYKQAAEYI---------SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVA 437 (535)
Q Consensus 367 ~~~eAie~y~kAaely~~egr~~~Aa~~l---------~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la 437 (535)
++++|+.+|+++.++..... .+...+ ...|.++...++|++|++.|++..+.......... .....
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~--~~~~~ 277 (359)
T 3ieg_A 203 DHELSLSEVRECLKLDQDHK---RCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTV--RSKER 277 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHH--HHHHH
T ss_pred CHHHHHHHHHHHHhhCccch---HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHH--HHHHH
Confidence 35666666666665543332 111122 12255566667777777777766554433211111 11111
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q psy11025 438 LVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKA 517 (535)
Q Consensus 438 ~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a 517 (535)
.+.+....|+...|...|++...... ......+..+.|++..||...|...
T Consensus 278 la~~~~~~~~~~~A~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~g~~~~A~~~ 328 (359)
T 3ieg_A 278 ICHCFSKDEKPVEAIRICSEVLQMEP-----------------------------DNVNALKDRAEAYLIEEMYDEAIQD 328 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-----------------------------TCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCc-----------------------------ccHHHHHHHHHHHHHcCCHHHHHHH
Confidence 22344455666667777665322100 0112346678899999999999999
Q ss_pred HHH
Q psy11025 518 FKE 520 (535)
Q Consensus 518 ~~~ 520 (535)
+++
T Consensus 329 ~~~ 331 (359)
T 3ieg_A 329 YEA 331 (359)
T ss_dssp HHH
T ss_pred HHH
Confidence 988
No 38
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.74 E-value=0.0025 Score=63.99 Aligned_cols=137 Identities=13% Similarity=0.036 Sum_probs=98.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcH--HHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNY--KQAAEYI 395 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~--~~Aa~~l 395 (535)
-+.+|...|++.+|...|.+|....... ....+.++...+.++... ++++|+.+|.+|..++...+.. ...+.++
T Consensus 59 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 138 (373)
T 1hz4_A 59 LGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLV 138 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHH
Confidence 3456667778899999999999887664 334566667777777655 5999999999999998766543 3456677
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
...|.++...|+|++|..+|++..+.....+.... .........+.+..|+...|...|++.
T Consensus 139 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~l~~a 200 (373)
T 1hz4_A 139 RIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQ-LQCLAMLIQCSLARGDLDNARSQLNRL 200 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGG-HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 78899999999999999999999877653221111 111122234566778988898888873
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.74 E-value=0.0014 Score=61.05 Aligned_cols=129 Identities=10% Similarity=-0.015 Sum_probs=94.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYIS-RNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~-~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
.-+.+|.+.+++.+|..+|.+|..... .+. ..+...|.++... ++++|+.+|.+|+++... -...+..
T Consensus 12 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~ 81 (228)
T 4i17_A 12 NEGNDALNAKNYAVAFEKYSEYLKLTNNQDS----VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN------LANAYIG 81 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS------HHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhccCCCCc----HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc------hHHHHHH
Confidence 566777788889999999999987753 222 2334467777665 599999999999976433 2456788
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESE-HLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e-~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
.|.++...++|++|++.|+++.+..-... .....+..+...+.+.+..|+...|...|++.
T Consensus 82 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 143 (228)
T 4i17_A 82 KSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHA 143 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999999987764432 22222333333446667788988899999874
No 40
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.73 E-value=0.0014 Score=60.79 Aligned_cols=155 Identities=11% Similarity=0.069 Sum_probs=106.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|..+|.++....... ..++...+.++... ++++|+++|+++.++.... ...+...
T Consensus 62 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~ 131 (243)
T 2q7f_A 62 NFANLLSSVNELERALAFYDKALELDSSA----ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN------GDLFYML 131 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCcc----hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC------HHHHHHH
Confidence 45667777777888888888887664333 23455666666654 5999999999999986544 2457778
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
|.++...++|++|+++|++..+..... ..+.. + +.+.+..|+...|...|++......+
T Consensus 132 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-----l--~~~~~~~~~~~~A~~~~~~~~~~~~~------------- 191 (243)
T 2q7f_A 132 GTVLVKLEQPKLALPYLQRAVELNENDTEARFQ-----F--GMCLANEGMLDEALSQFAAVTEQDPG------------- 191 (243)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH-----H--HHHHHHHTCCHHHHHHHHHHHHHCTT-------------
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCccHHHHHH-----H--HHHHHHcCCHHHHHHHHHHHHHhCcc-------------
Confidence 889999999999999999987664322 11221 2 23344556666688888863321100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 478 SLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 478 ~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
. ....+..+.|++..||...|...+++
T Consensus 192 ------------~----~~~~~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 192 ------------H----ADAFYNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp ------------C----HHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred ------------c----HHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 0 11235668889999999999999987
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.72 E-value=0.00069 Score=58.51 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=73.6
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHH
Q psy11025 324 LYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE-DNYKQAAEYISRAARM 401 (535)
Q Consensus 324 lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e-gr~~~Aa~~l~kaAel 401 (535)
.|-+.+++.+|..+|.+|.++.-+. +.+|..-|.+|.+. ++++|+++|.+|+++.... .....-++++...|.+
T Consensus 17 ~~~~~~~~~~A~~~y~~Al~~~p~~----~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~ 92 (127)
T 4gcn_A 17 AAYKQKDFEKAHVHYDKAIELDPSN----ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNA 92 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHH
Confidence 3444556889999999988764333 34577777777765 4999999999999996544 3456677889999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHH
Q psy11025 402 CVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 402 ~e~~~~y~~Aie~ye~~~~~~ 422 (535)
+...++|++|++.|+++....
T Consensus 93 ~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 93 FQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHHHHhhC
Confidence 999999999999999876543
No 42
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.71 E-value=0.00056 Score=77.37 Aligned_cols=154 Identities=12% Similarity=0.101 Sum_probs=109.2
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|.+.|++.+|..+|.+|.++.-+. +.+|..-|.+|.+.+ +++|+++|++|+++--.. ++.+...|
T Consensus 15 LG~~~~~~G~~~eAi~~~~kAl~l~P~~----~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~------~~a~~nLg 84 (723)
T 4gyw_A 15 LANIKREQGNIEEAVRLYRKALEVFPEF----AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF------ADAYSNMG 84 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHH
Confidence 4667777788999999999998764333 335777788888765 999999999999985433 45678889
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQE-SEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFS 478 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a-~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~ 478 (535)
.++...++|++|++.|+++.++.-. .+.+.+.+ .++...|+...|+..|++.-.. +|.+
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg-------~~~~~~g~~~eAi~~~~~Al~l--~P~~----------- 144 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAHSNLA-------SIHKDSGNIPEAIASYRTALKL--KPDF----------- 144 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH-------HHHHHTTCHHHHHHHHHHHHHH--CSCC-----------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH-------HHHHHcCCHHHHHHHHHHHHHh--CCCC-----------
Confidence 9999999999999999998766422 22233333 4455678888899999873331 1111
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 479 LGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 479 L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.. .....+.|+...||...|...+++
T Consensus 145 ------------~~----a~~~L~~~l~~~g~~~~A~~~~~k 170 (723)
T 4gyw_A 145 ------------PD----AYCNLAHCLQIVCDWTDYDERMKK 170 (723)
T ss_dssp ------------HH----HHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred ------------hH----HHhhhhhHHHhcccHHHHHHHHHH
Confidence 11 124456777778888888777765
No 43
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.70 E-value=0.0015 Score=59.50 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=51.1
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|...+++.+|..+|.++....... ..++...+.++... ++++|+++|.++.++.... ...+...|
T Consensus 14 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~ 83 (225)
T 2vq2_A 14 LAMEYMRGQDYRQATASIEDALKSDPKN----ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS------AEINNNYG 83 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCccc----hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC------hHHHHHHH
Confidence 4555556666777777777766543322 22344445555443 3667777777766654322 23445556
Q ss_pred HHHHHh-hhHHHHHHHHHHHHH
Q psy11025 400 RMCVRV-KEFDKAADLIRQEIG 420 (535)
Q Consensus 400 el~e~~-~~y~~Aie~ye~~~~ 420 (535)
.++... +++++|+++|++..+
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 84 WFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHhcCcHHHHHHHHHHHHc
Confidence 666666 666666666666554
No 44
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.68 E-value=0.0013 Score=61.67 Aligned_cols=154 Identities=14% Similarity=0.094 Sum_probs=105.3
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+.+|...+++.+|..+|.++....... +.++...+.++... ++++|+++|+++.++.... ...+...|.
T Consensus 44 a~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~ 113 (252)
T 2ho1_A 44 GLGYLQRGNTEQAKVPLRKALEIDPSS----ADAHAALAVVFQTEMEPKLADEEYRKALASDSRN------ARVLNNYGG 113 (252)
T ss_dssp HHHHHHTTCTGGGHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCCh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc------HHHHHHHHH
Confidence 444555566888999999887654333 34566677777665 5999999999999985433 356778899
Q ss_pred HHHHhhhHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccccc
Q psy11025 401 MCVRVKEFDKAADLIRQEIG--YHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFS 478 (535)
Q Consensus 401 l~e~~~~y~~Aie~ye~~~~--~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~ 478 (535)
++...++|++|+++|++... .... . .......+.+.+..|+...|...|++.......
T Consensus 114 ~~~~~g~~~~A~~~~~~~~~~~~~~~---~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-------------- 173 (252)
T 2ho1_A 114 FLYEQKRYEEAYQRLLEASQDTLYPE---R---SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-------------- 173 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCTTCTT---H---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--------------
T ss_pred HHHHHhHHHHHHHHHHHHHhCccCcc---c---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc--------------
Confidence 99999999999999999876 1111 1 111122234556678888899998873331110
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 479 LGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 479 L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
. ....+..+.+++..||...|...+++
T Consensus 174 -----------~----~~~~~~la~~~~~~g~~~~A~~~~~~ 200 (252)
T 2ho1_A 174 -----------Q----PSVALEMADLLYKEREYVPARQYYDL 200 (252)
T ss_dssp -----------C----HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------c----HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 0 11235567788889999999999887
No 45
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.68 E-value=0.00027 Score=69.44 Aligned_cols=136 Identities=11% Similarity=-0.010 Sum_probs=93.0
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED-NYKQAAEYISR 397 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg-r~~~Aa~~l~k 397 (535)
+.+|..-+++.+|...|.+|.....+. ....+.+|...+.+|... ++++|+.+|++|.+++...+ .......++..
T Consensus 122 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~n 201 (293)
T 2qfc_A 122 AAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHh
Confidence 344445556778888888877655332 223567788888888775 49999999999999976653 34455589999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHH-HHHHHH
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAA-EKAFKE 457 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA-~~~~e~ 457 (535)
+|.++...++|++|+++|+++.+.....+.....+.++...+.|....|+...| ...|++
T Consensus 202 lg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 202 HAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 999999999999999999999887654221111122222233455566666557 555665
No 46
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.67 E-value=0.002 Score=63.85 Aligned_cols=23 Identities=22% Similarity=0.173 Sum_probs=19.2
Q ss_pred HHHHHHHHhccCCHHHHHHHHHH
Q psy11025 498 AVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 498 ~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
....+.|++..|+...|...+++
T Consensus 288 ~~~l~~~~~~~g~~~~A~~~~~~ 310 (368)
T 1fch_A 288 RYNLGISCINLGAHREAVEHFLE 310 (368)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH
Confidence 35678888899999999988887
No 47
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.65 E-value=0.0011 Score=57.11 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHH
Q psy11025 351 AASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHL 428 (535)
Q Consensus 351 ~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~ 428 (535)
++|.++...++.+-+ .++++|+++|.+|+++.... ..++...|.++...++|++|++.|+++.++.... ..+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh
Confidence 455666666666554 56999999999999985443 4578889999999999999999999998775442 223
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 429 LAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 429 ~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
...++.+..++.+....++...|+..|++
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~k 108 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHR 108 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 33444444456777788999889999986
No 48
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.62 E-value=0.0024 Score=65.29 Aligned_cols=186 Identities=14% Similarity=0.085 Sum_probs=112.2
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+..|.+.+++.+|...|.++......+ +.++...+.++... ++++|+.+|.+|+++.... ...+...|
T Consensus 32 ~~~~~~~~g~~~~A~~~~~~~l~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~ 101 (450)
T 2y4t_A 32 LGKKLLAAGQLADALSQFHAAVDGDPDN----YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDF------TAARLQRG 101 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc------HHHHHHHH
Confidence 4556666777899999999987653222 34566666666654 5999999999999885333 45677888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHh----hHHHHHHHH-----HHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQES----EHLLAIGRL-----AVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCES 470 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~----e~~~~a~rl-----~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~s 470 (535)
.++...|+|++|+++|++..+..... ......+.+ .+....+.+..|+...|...|++......+ ....
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~ 179 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW--DAEL 179 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--CHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--ChHH
Confidence 89999999999999999886532211 111111110 111234455567777788888875442221 1100
Q ss_pred ccc--cccccccccchhhhhhhHHHH-------HHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 471 GSS--SFSFSLGKAGYHQESEHLLAI-------GRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 471 re~--~~l~~L~l~ay~~~~~~~~~~-------~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
... .+... ...+.+....|... .......+.++...||...|...+++
T Consensus 180 ~~~l~~~~~~--~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 236 (450)
T 2y4t_A 180 RELRAECFIK--EGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236 (450)
T ss_dssp HHHHHHHHHH--TTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 000 00000 12222322333322 23346678889999999999999887
No 49
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.61 E-value=0.0019 Score=64.38 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcC
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARG 446 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~ 446 (535)
+++|+++|++|.++...... ...+...|.++...|+|++|+++|++..+..... ..+.. ++.+....|
T Consensus 193 ~~~A~~~~~~al~~~p~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~-------l~~~~~~~g 261 (365)
T 4eqf_A 193 LEGVKELYLEAAHQNGDMID----PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNR-------LGATLANGD 261 (365)
T ss_dssp HHHHHHHHHHHHHHSCSSCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH-------HHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCccC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH-------HHHHHHHcC
Confidence 66677777777666433211 2345556677777788888888888876553221 11111 123344455
Q ss_pred CHHHHHHHHHHh
Q psy11025 447 DTVAAEKAFKEW 458 (535)
Q Consensus 447 D~vaA~~~~e~~ 458 (535)
+...|...|++.
T Consensus 262 ~~~~A~~~~~~a 273 (365)
T 4eqf_A 262 RSEEAVEAYTRA 273 (365)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 666666666653
No 50
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.58 E-value=0.0012 Score=78.97 Aligned_cols=168 Identities=15% Similarity=0.139 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHhchHHHHHHHH-------HHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcH
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYK-------QAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNY 388 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~-------kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~ 388 (535)
.+|+|..+|+|++.+.+|...+. +|.+.+.+... ..++-+-|+++++.+ .++|+++|.+| +.
T Consensus 1064 lyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~--p~vWsqLAKAql~~G~~kEAIdsYiKA-------dD- 1133 (1630)
T 1xi4_A 1064 LFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNE--PAVWSQLAKAQLQKGMVKEAIDSYIKA-------DD- 1133 (1630)
T ss_pred CHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCC--HHHHHHHHHHHHhCCCHHHHHHHHHhc-------CC-
Confidence 67899999999998776655554 44444433211 345678889998876 99999999987 11
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhc
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-------EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNC 461 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-------e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~ 461 (535)
...+.++|..+.+.|+|++|+++|..+.+.-... -.+.+..++- .+-..+..... ..|..+|.+
T Consensus 1134 ---~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rle--ele~fI~~~n~----ad~~~iGd~ 1204 (1630)
T 1xi4_A 1134 ---PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLA--ELEEFINGPNN----AHIQQVGDR 1204 (1630)
T ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHH--HHHHHHhCCCH----HHHHHHHHH
Confidence 2355668999999999999999998865433110 0111111111 00011111111 122334444
Q ss_pred cCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 462 CEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 462 ~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
|.+ +..|.+...-|..++. +.+++.|++..|++-.|-.++.+
T Consensus 1205 le~----------------eg~YeeA~~~Y~kA~n-y~rLA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1205 CYD----------------EKMYDAAKLLYNNVSN-FGRLASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred HHh----------------cCCHHHHHHHHHhhhH-HHHHHHHHHHhCCHHHHHHHHHH
Confidence 433 3345555555666554 47777788777888887777654
No 51
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.58 E-value=0.0025 Score=57.97 Aligned_cols=166 Identities=12% Similarity=0.097 Sum_probs=103.9
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-C-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-K-SDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~-~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
-+.+|...+++.+|...|.++....... ..++...+.++... + +++|+.+|+++.+ . +....-...+...
T Consensus 48 l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~---~~~~~~~~~~~~l 119 (225)
T 2vq2_A 48 RAEIYQYLKVNDKAQESFRQALSIKPDS----AEINNNYGWFLCGRLNRPAESMAYFDKALA-D---PTYPTPYIANLNK 119 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT-S---TTCSCHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCC----hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc-C---cCCcchHHHHHHH
Confidence 3455555566677777777776654332 22455666677665 4 9999999999988 1 1112234567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccC-CCCcccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCE-APERCESGSSSFS 476 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~-~~~f~~sre~~~l 476 (535)
|.++...+++++|+++|++..+..... ..+.. .+.+.+..|+...|...|++...... +
T Consensus 120 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-------la~~~~~~~~~~~A~~~~~~~~~~~~~~------------ 180 (225)
T 2vq2_A 120 GICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE-------LARTKMLAGQLGDADYYFKKYQSRVEVL------------ 180 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH-------HHHHHHHHTCHHHHHHHHHHHHHHHCSC------------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH-------HHHHHHHcCCHHHHHHHHHHHHHhCCCC------------
Confidence 899999999999999999987654332 11111 22445566888889999887433111 0
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHh-cCCCCchhh
Q psy11025 477 FSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW-GNCCEAPEI 530 (535)
Q Consensus 477 ~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~~-~~F~~s~E~ 530 (535)
... .....+.++...|+..+|...++.+ -.+.++.+.
T Consensus 181 -------------~~~----~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~ 218 (225)
T 2vq2_A 181 -------------QAD----DLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEEL 218 (225)
T ss_dssp -------------CHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred -------------CHH----HHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHH
Confidence 001 1134466777889999998887763 234444443
No 52
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.57 E-value=0.0031 Score=58.77 Aligned_cols=154 Identities=12% Similarity=0.103 Sum_probs=95.6
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHhCHHHHH---------------HHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC
Q psy11025 323 TLYSRAADVAHGEDNYKQAAEYISRNREAAS---------------TVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED 386 (535)
Q Consensus 323 ~lYekAA~~~eAa~af~kAA~~y~~~~~~AA---------------~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg 386 (535)
..+.+.+++.+|..+|.+|.... |+.+. .....-|.++... ++++|+.+|++|+++.-..
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~---p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~- 87 (208)
T 3urz_A 12 SAAIEAGQNGQAVSYFRQTIALN---IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN- 87 (208)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC---HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHCCCHHHHHHHHHHHHHhC---CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-
Confidence 34445577888888888877653 33221 1122266777665 5999999999999986554
Q ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCC
Q psy11025 387 NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAP 465 (535)
Q Consensus 387 r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~ 465 (535)
...+...|.++...|+|++|++.|+++.++.-.. ..+...+.+ ......++...+...|.+.. .
T Consensus 88 -----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~-----~~~~~~~~~~~~~~~~~~~~----~- 152 (208)
T 3urz_A 88 -----VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNY-----YYLTAEQEKKKLETDYKKLS----S- 152 (208)
T ss_dssp -----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----HHHHHHHHHHHHHHHHC-------C-
T ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHh----C-
Confidence 3677888999999999999999999997664322 222233322 22222223322333333210 0
Q ss_pred CccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 466 ERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 466 ~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.. . ........|++++..|++..|...|++
T Consensus 153 ---------------~~--------~--~~~a~~~~g~~~~~~~~~~~A~~~~~~ 182 (208)
T 3urz_A 153 ---------------PT--------K--MQYARYRDGLSKLFTTRYEKARNSLQK 182 (208)
T ss_dssp ---------------CC--------H--HHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ---------------CC--------c--hhHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 00 0 111234568889999999999999998
No 53
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.57 E-value=0.0027 Score=61.40 Aligned_cols=162 Identities=12% Similarity=-0.003 Sum_probs=105.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|...+++.+|..+|.+|......... .+...+.++... ++++|+++|++|.++.... ...+...
T Consensus 130 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l 199 (330)
T 3hym_B 130 AYGHSFAVESEHDQAMAAYFTAAQLMKGCHL----PMLYIGLEYGLTNNSKLAERFFSQALSIAPED------PFVMHEV 199 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHTTTCSH----HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC------HHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhccccHH----HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC------hHHHHHH
Confidence 4566777777788888888888776544322 244456666654 4899999999998876443 3567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQESEH---LLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSF 475 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~e~---~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~ 475 (535)
|.++...++|++|+++|++..+....... ..........++.+....|+...|...|++......+
T Consensus 200 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~----------- 268 (330)
T 3hym_B 200 GVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ----------- 268 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----------
T ss_pred HHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc-----------
Confidence 88888899999999999998776532110 0000011111224455677887888888874331111
Q ss_pred cccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 476 SFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 476 l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
........+.|++..|+...|...+++
T Consensus 269 ------------------~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (330)
T 3hym_B 269 ------------------NASTYSAIGYIHSLMGNFENAVDYFHT 295 (330)
T ss_dssp ------------------CSHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred ------------------chHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 011235567888888999999888887
No 54
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.57 E-value=0.0014 Score=61.67 Aligned_cols=137 Identities=9% Similarity=-0.012 Sum_probs=92.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh------------------C-CHHHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE------------------L-KSDAALTLYSRAAD 380 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek------------------~-~~~eAie~y~kAae 380 (535)
.-+.+|.+.+++.+|..+|.++...+-+++. +..++...+.++.+ . ++++|+..|+++++
T Consensus 46 ~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~-~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 124 (225)
T 2yhc_A 46 DLIYAYYKNADLPLAQAAIDRFIRLNPTHPN-IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVR 124 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT-HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHH
Confidence 3456677777788888888888776644332 23344444444432 2 48999999999999
Q ss_pred HHhcCCcHHHHHHH-----------HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHH
Q psy11025 381 VAHGEDNYKQAAEY-----------ISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTV 449 (535)
Q Consensus 381 ly~~egr~~~Aa~~-----------l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~v 449 (535)
.|-.......|... ...+|.++...++|.+|+..|+++.+.+-.......+. ...+.|+...|+..
T Consensus 125 ~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~---~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 125 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDAL---PLMENAYRQMQMNA 201 (225)
T ss_dssp TCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHH---HHHHHHHHHTTCHH
T ss_pred HCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHH---HHHHHHHHHcCCcH
Confidence 98777654443222 13567788889999999999999988775543322221 22235677788988
Q ss_pred HHHHHHHHhhh
Q psy11025 450 AAEKAFKEWGN 460 (535)
Q Consensus 450 aA~~~~e~~~~ 460 (535)
.|...|+.+..
T Consensus 202 ~A~~~~~~l~~ 212 (225)
T 2yhc_A 202 QAEKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 89999987544
No 55
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.57 E-value=0.0033 Score=60.67 Aligned_cols=22 Identities=9% Similarity=-0.029 Sum_probs=19.1
Q ss_pred HHHHHHHhccCCHHHHHHHHHH
Q psy11025 499 VALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 499 l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
...+.|++..||...|...+++
T Consensus 244 ~~l~~~~~~~g~~~~A~~~~~~ 265 (327)
T 3cv0_A 244 YNMAVSYSNMSQYDLAAKQLVR 265 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHH
Confidence 5668889999999999999987
No 56
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.57 E-value=0.0025 Score=55.78 Aligned_cols=155 Identities=15% Similarity=0.040 Sum_probs=103.2
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|...+++.+|...|.++....... ..++...+.++... ++++|+.+|.++.++.... ..++...|
T Consensus 14 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a 83 (186)
T 3as5_A 14 KGISHAKAGRYSQAVMLLEQVYDADAFD----VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN------VKVATVLG 83 (186)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCccC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHH
Confidence 3445555566667777666654432222 34566667776654 5999999999999885433 35677888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSL 479 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L 479 (535)
.++...+++++|+++|++......... ......+.+....|+...|...|++......+
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--------------- 142 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEANPINF------NVRFRLGVALDNLGRFDEAIDSFKIALGLRPN--------------- 142 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcHhH------HHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc---------------
Confidence 999999999999999999876643221 11111224455678888899998874331110
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 480 GKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 480 ~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
. .......+.|++..||...|...+++
T Consensus 143 ----------~----~~~~~~la~~~~~~~~~~~A~~~~~~ 169 (186)
T 3as5_A 143 ----------E----GKVHRAIAFSYEQMGRHEEALPHFKK 169 (186)
T ss_dssp ----------C----HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------c----hHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 0 12235668888999999999999887
No 57
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.52 E-value=0.0082 Score=58.41 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 395 ISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 395 l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+...|.++...++|++|++.|++..+..... ..+.. .+.+....|+...|...|++...
T Consensus 157 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-------la~~~~~~~~~~~A~~~~~~a~~ 216 (359)
T 3ieg_A 157 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYK-------ISTLYYQLGDHELSLSEVRECLK 216 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHH-------HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH-------HHHHHHHcCCHHHHHHHHHHHHh
Confidence 3344555555666666666666654432111 11111 22334455676667777776433
No 58
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.50 E-value=0.0023 Score=65.31 Aligned_cols=165 Identities=9% Similarity=0.003 Sum_probs=95.9
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHH-----
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEY----- 394 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~----- 394 (535)
-+.+|.+.+++.+|...|.++......+ ..++...+.++... ++++|+.+|+++..+.............
T Consensus 183 l~~~~~~~g~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 258 (450)
T 2y4t_A 183 RAECFIKEGEPRKAISDLKAASKLKNDN----TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLN 258 (450)
T ss_dssp HHHHHHHTTCGGGGHHHHHHHHHHHCSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 3444444455556666666655543222 23455555666554 4888888888888765444222211111
Q ss_pred -HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccc
Q psy11025 395 -ISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSS 473 (535)
Q Consensus 395 -l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~ 473 (535)
+...|.++...++|++|+++|++..+......... ..+....+.+....|+...|...|++......+
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~--~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~--------- 327 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYT--VRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD--------- 327 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHH--HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc---------
Confidence 13337777888999999999998876543211111 111222234555677887788888763221000
Q ss_pred cccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 474 SFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 474 ~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.....+..+.+++..||.-.|...+++
T Consensus 328 --------------------~~~~~~~l~~~~~~~~~~~~A~~~~~~ 354 (450)
T 2y4t_A 328 --------------------NVNALKDRAEAYLIEEMYDEAIQDYET 354 (450)
T ss_dssp --------------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------------cHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 012235667888889999999999987
No 59
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.50 E-value=0.0011 Score=61.41 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=97.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|...|.++....... +..+...+.++... ++++|+++|+++.++.... ...+...
T Consensus 28 ~~a~~~~~~~~~~~A~~~~~~~l~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l 97 (243)
T 2q7f_A 28 QQMGRGSEFGDYEKAAEAFTKAIEENKED----AIPYINFANLLSSVNELERALAFYDKALELDSSA------ATAYYGA 97 (243)
T ss_dssp --------------CCTTHHHHHTTCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc------hHHHHHH
Confidence 34555666677888888888876533222 34566667777655 5999999999999985443 4567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSF 477 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~ 477 (535)
|.++...++|++|+++|++..+..... ..+.. .+.+.+..|+...|...|++......+
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-------~a~~~~~~~~~~~A~~~~~~~~~~~~~------------- 157 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRAGMENGDLFYM-------LGTVLVKLEQPKLALPYLQRAVELNEN------------- 157 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHH-------HHHHHHHTSCHHHHHHHHHHHHHHCTT-------------
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHH-------HHHHHHHhccHHHHHHHHHHHHHhCCc-------------
Confidence 999999999999999999987665322 11222 234566678888899998874331111
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 478 SLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 478 ~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
. .......+.+++..|+...|...+++
T Consensus 158 ------------~----~~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (243)
T 2q7f_A 158 ------------D----TEARFQFGMCLANEGMLDEALSQFAA 184 (243)
T ss_dssp ------------C----HHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ------------c----HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 0 11234567788888999988888876
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.49 E-value=0.0014 Score=62.75 Aligned_cols=139 Identities=10% Similarity=0.046 Sum_probs=92.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------C-CHHHHHHHHHHHHHHHhcCCcHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE--------L-KSDAALTLYSRAADVAHGEDNYKQ 390 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek--------~-~~~eAie~y~kAaely~~egr~~~ 390 (535)
.-+.+|.+.+++.+|...|.++...+-+++. ...++...+.++.. . ++++|+.+|+++++.+-.......
T Consensus 57 ~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~-~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 135 (261)
T 3qky_A 57 YLARAYYQNKEYLLAASEYERFIQIYQIDPR-VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDD 135 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT-HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHCCCCch-hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHH
Confidence 4566666677778888888888776544332 34567777777765 4 499999999999999877755444
Q ss_pred HHHHH-----------HHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH--------hcCCHHHH
Q psy11025 391 AAEYI-----------SRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQL--------ARGDTVAA 451 (535)
Q Consensus 391 Aa~~l-----------~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L--------~~~D~vaA 451 (535)
+...+ ..+|.++...|+|++|+..|+++.+.+-.......+ ...++.+...+ ..++...|
T Consensus 136 a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a-~~~l~~~~~~~g~~~~~~~~~~~~~~A 214 (261)
T 3qky_A 136 ATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDA-LVGAMRAYIAYAEQSVRARQPERYRRA 214 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHH-HHHHHHHHHHHHHTSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHH-HHHHHHHHHHhcccchhhcccchHHHH
Confidence 43332 677889999999999999999998776443221111 11122223333 12555668
Q ss_pred HHHHHHhhh
Q psy11025 452 EKAFKEWGN 460 (535)
Q Consensus 452 ~~~~e~~~~ 460 (535)
...|+++..
T Consensus 215 ~~~~~~~~~ 223 (261)
T 3qky_A 215 VELYERLLQ 223 (261)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887554
No 61
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.47 E-value=0.0025 Score=60.27 Aligned_cols=186 Identities=14% Similarity=0.053 Sum_probs=103.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|.+.+++.+|..+|.++.. ...++...+.+|...+.++...+ +++|+++|++|+++..... ..+...|
T Consensus 43 l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~ 115 (272)
T 3u4t_A 43 RAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL------DMYGQIG 115 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------HHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH------HHHHHHH
Confidence 34466666667778777777766 22233334566777777777654 8999999999988755442 4677888
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFS 478 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~ 478 (535)
.++...++|++|++.|+++.+..... ..+...+. .+. ..++...|...|++......+...+-..-+.+...
T Consensus 116 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~------~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 188 (272)
T 3u4t_A 116 SYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQ------AYY-YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAA 188 (272)
T ss_dssp HHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHH------HHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHH------HHH-HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 88888888998888888876542111 11111110 112 22366667666666433222110000000000000
Q ss_pred cc--------ccchhhhhhh--------HHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 479 LG--------KAGYHQESEH--------LLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 479 L~--------l~ay~~~~~~--------~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
++ +..|.+.+.. ...........+.|++..||...|...+++
T Consensus 189 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 246 (272)
T 3u4t_A 189 QDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKN 246 (272)
T ss_dssp HSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 00 0011111111 111223446678999999999999999987
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.38 E-value=0.0038 Score=54.15 Aligned_cols=126 Identities=13% Similarity=0.003 Sum_probs=86.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|...+++.+|...|.+|......+ +.++...|.++... ++++|+++|.+|+++.... ...+...
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~ 87 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIELNPSN----AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY------IKGYYRR 87 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------HHHHHHH
Confidence 34555666677889999999988765433 34566667777665 5999999999999986443 3567888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
|.++...++|++|+++|++............ ..+..+...+..++...|...+++..
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~----~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK----MKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH----HHHHHHHHHHHHHHHHHHHHcccchH
Confidence 9999999999999999999876653322111 11112223444566666888877643
No 63
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.003 Score=58.72 Aligned_cols=135 Identities=10% Similarity=-0.007 Sum_probs=87.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHH------HhcCCcHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNR---EAASTVLEKGAKSLEELK-SDAALTLYSRAADV------AHGEDNYK 389 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~---~~AA~~l~~AAk~~ek~~-~~eAie~y~kAael------y~~egr~~ 389 (535)
.-+.+|...+++.+|..+|.++.......+ ..-+.++...+.++...+ +++|+++|+++..+ +...|+..
T Consensus 43 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 122 (258)
T 3uq3_A 43 NRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAE 122 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHH
Confidence 345556666667788888888877765431 123566777777777654 88888888888884 22333333
Q ss_pred HHH--------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy11025 390 QAA--------------EYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAF 455 (535)
Q Consensus 390 ~Aa--------------~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~ 455 (535)
.|. ..+...|.++...++|++|++.|++..+...... ......+.+.+..|+...|...|
T Consensus 123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~ 196 (258)
T 3uq3_A 123 KELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADC 196 (258)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 333 3445566677778999999999999876643321 11122234566678888899999
Q ss_pred HHhhh
Q psy11025 456 KEWGN 460 (535)
Q Consensus 456 e~~~~ 460 (535)
++.-.
T Consensus 197 ~~al~ 201 (258)
T 3uq3_A 197 NKAIE 201 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87544
No 64
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.35 E-value=0.0081 Score=60.41 Aligned_cols=20 Identities=15% Similarity=0.373 Sum_probs=10.4
Q ss_pred HHHHHhccCCHHHHHHHHHH
Q psy11025 501 LVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 501 a~lc~L~~gD~V~A~~a~~~ 520 (535)
.+.++...|+...|...+++
T Consensus 311 l~~~~~~~g~~~~A~~~~~~ 330 (388)
T 1w3b_A 311 LANIKREQGNIEEAVRLYRK 330 (388)
T ss_dssp HHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 34445555555555555544
No 65
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.33 E-value=0.0055 Score=50.44 Aligned_cols=99 Identities=17% Similarity=0.222 Sum_probs=76.7
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGE-DNYKQAAEYISRA 398 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~e-gr~~~Aa~~l~ka 398 (535)
-+..|...+++.+|...|.++......+ ..++...|.++.. .++++|+.+|.+++++.... +....-..++...
T Consensus 10 l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (131)
T 1elr_A 10 LGNDAYKKKDFDTALKHYDKAKELDPTN----MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARI 85 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCcc----HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHH
Confidence 4566677778899999999988765333 2356666666655 45999999999999998654 4444447788899
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
|.++...++|++|++.|++..+...
T Consensus 86 a~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 86 GNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCC
Confidence 9999999999999999999877643
No 66
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.32 E-value=0.01 Score=57.18 Aligned_cols=89 Identities=10% Similarity=0.003 Sum_probs=50.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|...+++.+|...|.++....... +.++...+.++... ++++|+.+|.++.++.... ...+...
T Consensus 26 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l 95 (327)
T 3cv0_A 26 EEGLSMLKLANLAEAALAFEAVCQAAPER----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD------IAVHAAL 95 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC------HHHHHHH
Confidence 45666777777888888888876543222 22344445555543 4777777777776653221 2234444
Q ss_pred HHHHHHhhhHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQE 418 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~ 418 (535)
|.++...+++++|++.|++.
T Consensus 96 a~~~~~~~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 96 AVSHTNEHNANAALASLRAW 115 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHH
Confidence 44555555555555555444
No 67
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.30 E-value=0.0025 Score=55.00 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=58.8
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q psy11025 323 TLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAARM 401 (535)
Q Consensus 323 ~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel 401 (535)
..|-+.+++.+|.++|.+|....-.+ +.+|..-|.++.+.+ +++|++.|.+|+++-... ...+...|.+
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~~~lg~~ 90 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRDPEN----AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF------IKGYIRKAAC 90 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh------hHHHHHHHHH
Confidence 33444556777888887776553222 234666666666654 888888888888773332 2456677778
Q ss_pred HHHhhhHHHHHHHHHHHHHH
Q psy11025 402 CVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 402 ~e~~~~y~~Aie~ye~~~~~ 421 (535)
+...|+|++|++.|+++.++
T Consensus 91 ~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHH
Confidence 88888888888888877544
No 68
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.29 E-value=0.0076 Score=58.15 Aligned_cols=23 Identities=13% Similarity=-0.126 Sum_probs=19.2
Q ss_pred HHHHHHHHhccCCHHHHHHHHHH
Q psy11025 498 AVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 498 ~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
....+.|++..|+...|...+++
T Consensus 239 ~~~la~~~~~~g~~~~A~~~~~~ 261 (330)
T 3hym_B 239 LNNLGHVCRKLKKYAEALDYHRQ 261 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH
Confidence 45678888899999999988887
No 69
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.28 E-value=0.0052 Score=60.77 Aligned_cols=166 Identities=12% Similarity=0.009 Sum_probs=109.1
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
.+.+| ..+++.+|...|.++........ -+.++...+.++... ++++|+.+|++|.++.... ...+...|
T Consensus 188 ~~~~~-~~~~~~~A~~~~~~a~~~~p~~~--~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~l~ 258 (368)
T 1fch_A 188 LGSLL-SDSLFLEVKELFLAAVRLDPTSI--DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND------YLLWNKLG 258 (368)
T ss_dssp THHHH-HHHHHHHHHHHHHHHHHHSTTSC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHh-hcccHHHHHHHHHHHHHhCcCcc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC------HHHHHHHH
Confidence 45566 77889999999999877643311 234566677777765 5999999999999985443 35778899
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccccc
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFS 478 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~ 478 (535)
.++...|+|++|++.|++..+..... ..+.. .+.+.+..|+...|...|++......+.. .. ...
T Consensus 259 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-------l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~-~~~---- 324 (368)
T 1fch_A 259 ATLANGNQSEEAVAAYRRALELQPGYIRSRYN-------LGISCINLGAHREAVEHFLEALNMQRKSR--GP-RGE---- 324 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH-------HHHHHHHHTCHHHHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH-------HHHHHHHCCCHHHHHHHHHHHHHhCCCCC--Cc-ccc----
Confidence 99999999999999999987654321 12222 23455667888889999987433211100 00 000
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 479 LGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 479 L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.. ..........+.|+...|+.-.|...+.+
T Consensus 325 --~~---------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 355 (368)
T 1fch_A 325 --GG---------AMSENIWSTLRLALSMLGQSDAYGAADAR 355 (368)
T ss_dssp --CC---------CCCHHHHHHHHHHHHHHTCGGGHHHHHTT
T ss_pred --cc---------chhhHHHHHHHHHHHHhCChHhHHHhHHH
Confidence 00 00012235567888888999999888765
No 70
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.24 E-value=0.011 Score=48.46 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=85.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|...+++.+|...|.++....... ...+...+.++.. .++++|+.+|.++..+.... ...+...|
T Consensus 7 l~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~ 76 (136)
T 2fo7_A 7 LGNAYYKQGDYDEAIEYYQKALELDPRS----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS------AEAWYNLG 76 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHcCCcc----hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc------hHHHHHHH
Confidence 4667778888999999999987654333 2345555666654 46999999999999875433 34566788
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
.++...++|++|+++|++......... ......+.+....|+...|...|++.
T Consensus 77 ~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 77 NAYYKQGDYDEAIEYYQKALELDPRSA------EAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 899999999999999999876543221 11111234556678888898888763
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.21 E-value=0.0094 Score=51.96 Aligned_cols=125 Identities=17% Similarity=0.146 Sum_probs=88.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|...+++.+|...|.++........ .++...+.++.. .++++|+++|.++..+.... ...+...
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~ 116 (186)
T 3as5_A 47 HLGIAYVKTGAVDRGTELLERSLADAPDNV----KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN------FNVRFRL 116 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh------HHHHHHH
Confidence 567777788888999999988876643332 345555666655 45999999999999985443 3567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
|.++...+++++|+++|++..+...... ......+.+....|+...|...|++...
T Consensus 117 a~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 117 GVALDNLGRFDEAIDSFKIALGLRPNEG------KVHRAIAFSYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHhcCccch------HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999876643221 1111223456667888889999887443
No 72
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.19 E-value=0.005 Score=51.44 Aligned_cols=101 Identities=9% Similarity=-0.084 Sum_probs=77.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|...|.++...+-.++. +..++...+.++... ++++|+.+|.+++..+..... ....+...
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~~~~~~l 82 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPNGVY-TPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK---AAGGLLKL 82 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---HHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc---cHHHHHHH
Confidence 3456777788899999999998776543332 345666677777665 599999999999998765532 45677888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
|.++...|++++|++.|++....+-.
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 99999999999999999998776643
No 73
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.17 E-value=0.0054 Score=57.97 Aligned_cols=125 Identities=10% Similarity=0.012 Sum_probs=90.8
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-|.+|.+.+++.+|...|.++......+.. ++...+.++... ++++|+++|.+|++ .. +.....+.++...
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~----~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~--~~~~~~~~~~~~l 80 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYNSPY----IYNRRAVCYYELAKYDLAQKDIETYFS-KV--NATKAKSADFEYY 80 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCCCST----THHHHHHHHHHTTCHHHHHHHHHHHHT-TS--CTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHHhhHHHHHHHHHHHHh-cc--CchhHHHHHHHHH
Confidence 4567777788899999999998765433322 355556666654 59999999999998 32 3334456778899
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
|.++...++|++|++.|+++.+..... ..+... +.++...|+...|...|++.
T Consensus 81 g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l-------~~~~~~~~~~~~A~~~~~~a 134 (272)
T 3u4t_A 81 GKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQI-------GSYFYNKGNFPLAIQYMEKQ 134 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH-------HHHHHHTTCHHHHHHHHGGG
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHH-------HHHHHHccCHHHHHHHHHHH
Confidence 999999999999999999997764332 222222 34566778888899999874
No 74
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.15 E-value=0.0096 Score=59.86 Aligned_cols=111 Identities=18% Similarity=0.187 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcC
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARG 446 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~ 446 (535)
+++|+++|++|+++.... ...+...|.++...|++++|++.|++..+..-.. ..+.. .+.+....|
T Consensus 253 ~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~-------l~~~~~~~g 319 (388)
T 1w3b_A 253 IDLAIDTYRRAIELQPHF------PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNN-------LANIKREQG 319 (388)
T ss_dssp HHHHHHHHHHHHHTCSSC------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHH-------HHHHHHTTT
T ss_pred HHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHH-------HHHHHHHcC
Confidence 566666666665542221 1234556666667777777777777776553221 11111 123445567
Q ss_pred CHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 447 DTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 447 D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+...|...|++.-.. +|. ........+.++...|+...|...+++
T Consensus 320 ~~~~A~~~~~~al~~--~p~---------------------------~~~~~~~l~~~~~~~g~~~~A~~~~~~ 364 (388)
T 1w3b_A 320 NIEEAVRLYRKALEV--FPE---------------------------FAAAHSNLASVLQQQGKLQEALMHYKE 364 (388)
T ss_dssp CHHHHHHHHHHHTTS--CTT---------------------------CHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc--CCC---------------------------cHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 777777777753221 110 011234557788889999999999987
No 75
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.14 E-value=0.0045 Score=54.86 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=73.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|..+|.+|....-.+ +.++...+.+|... ++++|+.+|.+|+++.... ...+...
T Consensus 16 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l 85 (164)
T 3sz7_A 16 SEGNAAMARKEYSKAIDLYTQALSIAPAN----PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY------SKAWSRL 85 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCcC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHHH
Confidence 34555666677899999999988765443 33566777777765 4999999999999986543 4677888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
|.++...++|++|++.|+++.++.-.
T Consensus 86 g~~~~~~g~~~~A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEKGIEAEGN 111 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998776543
No 76
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.0049 Score=51.84 Aligned_cols=92 Identities=15% Similarity=0.127 Sum_probs=64.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+..|.+.+++.+|..+|.+|....-.+. .++..-|.++... ++++|+.+|.+|+++.... ...+...|
T Consensus 10 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg 79 (126)
T 3upv_A 10 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA----RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF------VRAYIRKA 79 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCCh----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc------HHHHHHHH
Confidence 34455556667888888888876543332 3566666666655 4888888888888875433 34677778
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~ 422 (535)
.++...|+|++|++.|+++.+..
T Consensus 80 ~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHhC
Confidence 88888888888888888876654
No 77
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.13 E-value=0.011 Score=52.85 Aligned_cols=128 Identities=16% Similarity=0.084 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHhch-HHHHHHHHHHHHHHHh--CHHHHHH--------------HHHHHHHHHHh-CCHHHHHHHHHHH
Q psy11025 317 KPDAALTLYSRAADV-AHGEDNYKQAAEYISR--NREAAST--------------VLEKGAKSLEE-LKSDAALTLYSRA 378 (535)
Q Consensus 317 K~D~AA~lYekAA~~-~eAa~af~kAA~~y~~--~~~~AA~--------------~l~~AAk~~ek-~~~~eAie~y~kA 378 (535)
++++|.++|++|=.. ..-..++..-+.+|.+ ..+.|.. ++...+.++.. .+++.|++.+.+|
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a 99 (184)
T 3vtx_A 20 DFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRA 99 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 566777777776431 1222333344444432 1122222 23333444444 4589999999999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 379 ADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 379 aely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
..+.... ...+...|.++...|+|++|++.|++..+..-.. ..+... +.++...|+...|...|++
T Consensus 100 ~~~~~~~------~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l-------g~~~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 100 IALNTVY------ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSI-------GLAYEGKGLRDEAVKYFKK 166 (184)
T ss_dssp HHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH-------HHHHHHTTCHHHHHHHHHH
T ss_pred HHhCccc------hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHH-------HHHHHHCCCHHHHHHHHHH
Confidence 9886554 2456677889999999999999999987664321 222222 3556677888889999987
No 78
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.13 E-value=0.0078 Score=63.97 Aligned_cols=119 Identities=10% Similarity=-0.047 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHhc
Q psy11025 367 KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEH-LLAIGRLAVALVLVQLAR 445 (535)
Q Consensus 367 ~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~-~~~a~rl~la~il~~L~~ 445 (535)
++++|+++|.++.++.... ...+..++.++.+.|++++|+++|++..+....... .......+..++.+....
T Consensus 456 ~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~ 529 (597)
T 2xpi_A 456 NILLANEYLQSSYALFQYD------PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKL 529 (597)
T ss_dssp CHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHh
Confidence 3566666666665543321 133555666777778888888888887665432100 000011111222344456
Q ss_pred CCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 446 GDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 446 ~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
|+...|...|++......+ -.......+.++...|+.-.|...+++
T Consensus 530 g~~~~A~~~~~~~~~~~p~-----------------------------~~~~~~~l~~~~~~~g~~~~A~~~~~~ 575 (597)
T 2xpi_A 530 KMYDAAIDALNQGLLLSTN-----------------------------DANVHTAIALVYLHKKIPGLAITHLHE 575 (597)
T ss_dssp TCHHHHHHHHHHHHHHSSC-----------------------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCC-----------------------------ChHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 7777788888763221100 011234557788889999999999987
No 79
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.11 E-value=0.0048 Score=69.76 Aligned_cols=125 Identities=17% Similarity=0.224 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHhc---------------------hHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHH
Q psy11025 317 KPDAALTLYSRAAD---------------------VAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTL 374 (535)
Q Consensus 317 K~D~AA~lYekAA~---------------------~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~ 374 (535)
++|+|..+|++|-. +.+|..+|.+|..+. ++. +.+|..-+.+|.+.+ +++|+++
T Consensus 24 ~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~---P~~-~~a~~nLg~~l~~~g~~~~A~~~ 99 (723)
T 4gyw_A 24 NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS---PTF-ADAYSNMGNTLKEMQDVQGALQC 99 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC-HHHHHHHHHHHHHcCCHHHHHHH
Confidence 66778888777653 345555555555442 221 345666777777764 9999999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q psy11025 375 YSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE-SEHLLAIGRLAVALVLVQLARGDTVAAEK 453 (535)
Q Consensus 375 y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a-~e~~~~a~rl~la~il~~L~~~D~vaA~~ 453 (535)
|++|+++--.. +..+...|.++...|+|++|++.|+++.++.-. .+.+.+.+ .++..++.++. |..
T Consensus 100 ~~kAl~l~P~~------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~-----~~l~~~g~~~~--A~~ 166 (723)
T 4gyw_A 100 YTRAIQINPAF------ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLA-----HCLQIVCDWTD--YDE 166 (723)
T ss_dssp HHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHH-----HHHHHTTCCTT--HHH
T ss_pred HHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhh-----hHHHhcccHHH--HHH
Confidence 99999984332 456788899999999999999999998765422 12222222 22444544444 777
Q ss_pred HHHHh
Q psy11025 454 AFKEW 458 (535)
Q Consensus 454 ~~e~~ 458 (535)
.|++.
T Consensus 167 ~~~ka 171 (723)
T 4gyw_A 167 RMKKL 171 (723)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77663
No 80
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.11 E-value=0.0059 Score=63.74 Aligned_cols=157 Identities=15% Similarity=0.092 Sum_probs=89.3
Q ss_pred HHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q psy11025 325 YSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCV 403 (535)
Q Consensus 325 YekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e 403 (535)
|.+.+++.+|...|.++........ .++...+.++... ++++|+++|.++.++..... ..+...|.++.
T Consensus 320 ~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~ 389 (537)
T 3fp2_A 320 YFILQDYKNAKEDFQKAQSLNPENV----YPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP------EVPTFFAEILT 389 (537)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCS----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------HHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHH
Confidence 3333334455555555544322221 2344455555554 48888888888888754442 35556688888
Q ss_pred HhhhHHHHHHHHHHHHHHHHHhhH-HHHHH-HHHHHHHHHHH--------hcCCHHHHHHHHHHhhhccCCCCccccccc
Q psy11025 404 RVKEFDKAADLIRQEIGYHQESEH-LLAIG-RLAVALVLVQL--------ARGDTVAAEKAFKEWGNCCEAPERCESGSS 473 (535)
Q Consensus 404 ~~~~y~~Aie~ye~~~~~~~a~e~-~~~a~-rl~la~il~~L--------~~~D~vaA~~~~e~~~~~~~~~~f~~sre~ 473 (535)
..|+|++|++.|+++.+....... ....+ .+..+.++..+ ..|+...|...|++......+
T Consensus 390 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~--------- 460 (537)
T 3fp2_A 390 DRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPR--------- 460 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTT---------
T ss_pred HhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCC---------
Confidence 889999999999888766543211 11111 01111112222 015666688888763321110
Q ss_pred cccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 474 SFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 474 ~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.....+..+.|++..|+.-.|...+++
T Consensus 461 --------------------~~~~~~~l~~~~~~~g~~~~A~~~~~~ 487 (537)
T 3fp2_A 461 --------------------SEQAKIGLAQLKLQMEKIDEAIELFED 487 (537)
T ss_dssp --------------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------------CHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 012235668888999999999998887
No 81
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.11 E-value=0.0088 Score=51.47 Aligned_cols=100 Identities=19% Similarity=0.167 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hh
Q psy11025 348 NREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE-SE 426 (535)
Q Consensus 348 ~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a-~e 426 (535)
+|+.|-....++-..++..++++|+++|.+|+++.... ...+...|.++...|+|++|++.|+++.++-.. ..
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45555555555555666777999999999999985443 457788899999999999999999998765322 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 427 HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 427 ~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.+... +.|++..|+...|...|++.-.
T Consensus 83 a~~~l-------g~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 83 GYIRK-------AACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHH-------HHHHHHCCCHHHHHHHHHHHHH
Confidence 22222 3556677888889999997544
No 82
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.08 E-value=0.019 Score=54.85 Aligned_cols=23 Identities=4% Similarity=-0.113 Sum_probs=19.1
Q ss_pred HHHHHHHHhc----cCCHHHHHHHHHH
Q psy11025 498 AVALVLVQLA----RGDTVAAEKAFKE 520 (535)
Q Consensus 498 ~l~a~lc~L~----~gD~V~A~~a~~~ 520 (535)
.+..+.|++. .+|...|...+++
T Consensus 185 ~~~lg~~~~~g~~~~~~~~~A~~~~~~ 211 (273)
T 1ouv_A 185 CFNAGNMYHHGEGATKNFKEALARYSK 211 (273)
T ss_dssp HHHHHHHHHHTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence 3567888888 9999999988887
No 83
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.07 E-value=0.0077 Score=64.98 Aligned_cols=99 Identities=11% Similarity=-0.015 Sum_probs=80.1
Q ss_pred HHHHhchHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHh---cCCcHHHHHHHHH
Q psy11025 325 YSRAADVAHGEDNYKQAAEYISR----NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAH---GEDNYKQAAEYIS 396 (535)
Q Consensus 325 YekAA~~~eAa~af~kAA~~y~~----~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~---~egr~~~Aa~~l~ 396 (535)
+..-|.+.+|...|++|-..+.+ ..-.-+.+|...|.+|... ++++|..+|++|.+++. +.+-+. -+..+.
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~ 397 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVM 397 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHH
Confidence 33345688999999999998865 2224677888999999876 49999999999999964 444444 567788
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
++|.+|...|+|++|..+|+++.+.+..
T Consensus 398 nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 398 RAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888765
No 84
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.05 E-value=0.0027 Score=67.45 Aligned_cols=158 Identities=9% Similarity=0.021 Sum_probs=102.7
Q ss_pred HHHHHHHHhch-HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADV-AHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 321 AA~lYekAA~~-~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
-+.+|...+++ .+|..+|.+|....-.. +.++...|.+|... ++++|+++|++|+++.. . ...+...
T Consensus 108 lg~~~~~~g~~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~--~~~~~~l 176 (474)
T 4abn_A 108 KGKALNVTPDYSPEAEVLLSKAVKLEPEL----VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCK-----N--KVSLQNL 176 (474)
T ss_dssp HHHHHTSSSSCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCC-----C--HHHHHHH
T ss_pred HHHHHHhccccHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-----C--HHHHHHH
Confidence 34455555667 88888888887654333 23566667777654 59999999999998742 2 3788889
Q ss_pred HHHHHHh---------hhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH----hc--CCHHHHHHHHHHhhhcc
Q psy11025 399 ARMCVRV---------KEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQL----AR--GDTVAAEKAFKEWGNCC 462 (535)
Q Consensus 399 Ael~e~~---------~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L----~~--~D~vaA~~~~e~~~~~~ 462 (535)
|.++... ++|++|++.|+++.+..-.. ..+...+.+ +..+ .. ++...|...|++....
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~-----~~~~~~~~~~~~g~~~~A~~~~~~al~~- 250 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNA-----YLSLYFNTGQNPKISQQALSAYAQAEKV- 250 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----HHHHHHHTTCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH-----HHHHHHhhccccchHHHHHHHHHHHHHh-
Confidence 9999888 99999999999998765332 223333322 2222 11 5566688888863321
Q ss_pred CCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 463 EAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 463 ~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+|. ...-....+..+.|+...|++..|...|++
T Consensus 251 -~p~------------------------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 283 (474)
T 4abn_A 251 -DRK------------------------ASSNPDLHLNRATLHKYEESYGEALEGFSQ 283 (474)
T ss_dssp -CGG------------------------GGGCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -CCC------------------------cccCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 110 000112235668888888999999888877
No 85
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.005 Score=63.65 Aligned_cols=162 Identities=15% Similarity=0.054 Sum_probs=106.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|...|.++......+. .++...+.++... ++++|+.+|.++.+...... ..+...
T Consensus 309 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l 378 (514)
T 2gw1_A 309 HRGQMNFILQNYDQAGKDFDKAKELDPENI----FPYIQLACLAYRENKFDDCETLFSEAKRKFPEAP------EVPNFF 378 (514)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHTCSSCS----HHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCS------HHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhChhhH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCH------HHHHHH
Confidence 456666777777788888887766543322 2455666666655 49999999999998865543 467778
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHHHhhhccCCCCccccccccc
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLA---RGDTVAAEKAFKEWGNCCEAPERCESGSSSF 475 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~---~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~ 475 (535)
|.++...|+|++|+.+|++..+..................+.+.+. .|+...|...|++......+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~----------- 447 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR----------- 447 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT-----------
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc-----------
Confidence 8999999999999999999877654432100000011112245666 78888898888874331110
Q ss_pred cccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 476 SFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 476 l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
........+.|++..||...|...+++
T Consensus 448 ------------------~~~~~~~la~~~~~~g~~~~A~~~~~~ 474 (514)
T 2gw1_A 448 ------------------SEQAKIGLAQMKLQQEDIDEAITLFEE 474 (514)
T ss_dssp ------------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------------------cHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 011235567888899999999998887
No 86
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.05 E-value=0.0069 Score=54.51 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=75.8
Q ss_pred ccCCHHHHHH------HHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCC
Q psy11025 314 EELKPDAALT------LYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGED 386 (535)
Q Consensus 314 ~k~K~D~AA~------lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~eg 386 (535)
.+..|+.+-. .|.+.+++.+|..+|.+|....-.++. ++..-+.++... ++++|+++|.+|+.+.-...
T Consensus 29 l~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~----~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 29 NAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVD----YIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred hCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 3456664444 444556688999999998876433333 466667777765 49999999999999976653
Q ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Q psy11025 387 NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESE 426 (535)
Q Consensus 387 r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e 426 (535)
..+...|.++...|+|++|++.|+++.++....+
T Consensus 105 ------~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 105 ------TPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp ------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred ------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 3567889999999999999999999987764443
No 87
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.04 E-value=0.0019 Score=59.10 Aligned_cols=126 Identities=10% Similarity=0.044 Sum_probs=85.0
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+..|.+.+++.+|...|.+|. .+ -+.++..-+.++... ++++|+++|.+|+.+.... ...+...|.
T Consensus 13 g~~~~~~~~~~~A~~~~~~a~-----~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~lg~ 79 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAVQ-----DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL------AVAYFQRGM 79 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTSS-----SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHc-----CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------hHHHHHHHH
Confidence 344445566777888777773 11 234677777777665 5999999999999985432 356788899
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 401 MCVRVKEFDKAADLIRQEIGYHQESE----------HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 401 l~e~~~~y~~Aie~ye~~~~~~~a~e----------~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
++...++|++|++.|+++.+...... ............+.++...|+...|...|++...
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999999999999999877543211 0000011122223556677888889999987544
No 88
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.03 E-value=0.017 Score=54.37 Aligned_cols=119 Identities=11% Similarity=0.025 Sum_probs=82.1
Q ss_pred hchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhh
Q psy11025 329 ADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~ 407 (535)
+++.+|...|.++.......+..-+.++...+.++... ++++|+.+|++|+++.... ...+...|.++...++
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM------PEVFNYLGIYLTQAGN 92 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHccC
Confidence 44666677776665542223333455566666666654 5999999999999985443 3467788999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 408 FDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 408 y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
|++|+++|+++.+..... ..+... +.+.+..|+...|...|++...
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~l-------a~~~~~~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNR-------GIALYYGGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHH-------HHHHHHhccHHHHHHHHHHHHH
Confidence 999999999988764332 222222 2455667888889999988544
No 89
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.02 E-value=0.0091 Score=50.89 Aligned_cols=92 Identities=10% Similarity=-0.015 Sum_probs=70.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|..+|.+|....-++. .++...+.++... ++++|+.+|++|+++--.. ...+...
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~P~~~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------~~~~~~l 91 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKEPERE----EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD------IAVHAAL 91 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Confidence 556677788999999999999987653332 3456667777665 4999999999999985543 2356778
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~ 421 (535)
|.++...|++++|+..|++..+.
T Consensus 92 a~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 92 AVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 88999999999999999987543
No 90
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.01 E-value=0.0077 Score=56.41 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHH
Q psy11025 355 VLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIG 432 (535)
Q Consensus 355 ~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~ 432 (535)
++..-+.++... ++++|+.+|++|+++. .. ...+...|.++...|+|++|+..|+++.+..-.. ......
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~l- 191 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE-DT------PEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRY- 191 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH-
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH-
Confidence 455556666655 4999999999999987 22 3466788999999999999999999987654322 112222
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 433 RLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 433 rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
..+.+..|+...|...|++
T Consensus 192 ------a~~~~~~g~~~~A~~~~~~ 210 (217)
T 2pl2_A 192 ------ASALLLKGKAEEAARAAAL 210 (217)
T ss_dssp ------HHHHTC-------------
T ss_pred ------HHHHHHccCHHHHHHHHHH
Confidence 2445566777668888875
No 91
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.98 E-value=0.0087 Score=55.06 Aligned_cols=101 Identities=13% Similarity=0.022 Sum_probs=72.0
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC-------HH-HHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCc--HHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN-------RE-AASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDN--YKQ 390 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~-------~~-~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr--~~~ 390 (535)
+..+.+.+++.+|..+|.+|..+--.. .. .-+.+|..-+.++.+.+ +++|+.+|.+|+++|...+. ++.
T Consensus 18 G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~ 97 (159)
T 2hr2_A 18 AQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE 97 (159)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch
Confidence 334445567889999999998876442 11 12337777788888765 99999999999999654442 222
Q ss_pred HHHHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 391 AAEYI----SRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 391 Aa~~l----~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
+ +.+ -.-|..+...++|++|++.|+++.++--
T Consensus 98 ~-~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 98 G-KLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 2 333 6667788888999999999999877653
No 92
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0092 Score=61.63 Aligned_cols=29 Identities=14% Similarity=0.019 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy11025 392 AEYISRAARMCVRVKEFDKAADLIRQEIG 420 (535)
Q Consensus 392 a~~l~kaAel~e~~~~y~~Aie~ye~~~~ 420 (535)
...+...|.++...++|++|+++|++..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 237 AISLEHTGIFKFLKNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34444455555666778888887777643
No 93
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.95 E-value=0.01 Score=53.33 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hh
Q psy11025 348 NREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE-SE 426 (535)
Q Consensus 348 ~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a-~e 426 (535)
+|+.+...|..+.-++...++++|+.+|++|+.+--.. ...+...|.++...|+|++|++.|+++..+.-. ..
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN------VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 56666666666666666667999999999999985443 346778889999999999999999999776533 22
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhc
Q psy11025 427 HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNC 461 (535)
Q Consensus 427 ~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~ 461 (535)
.+...+ .|++..|+...|..+|++.-..
T Consensus 106 ~~~~lg-------~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 106 PVFHTG-------QCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHH-------HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-------HHHHHcCCHHHHHHHHHHHHHh
Confidence 333333 5566778888899999985553
No 94
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=96.94 E-value=0.026 Score=52.28 Aligned_cols=132 Identities=11% Similarity=0.034 Sum_probs=88.1
Q ss_pred HHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHH
Q psy11025 355 VLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIG 432 (535)
Q Consensus 355 ~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~ 432 (535)
.+...|.++- ..++++|+++|.+|+++....+ . ..+...|.++...++|++|++.|+++.+..-.. ..+..
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~-~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-- 81 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD-S----VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIG-- 81 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC-H----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHH--
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC-c----HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHH--
Confidence 4444555554 4569999999999999875221 1 344448889999999999999999987543221 11222
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHH
Q psy11025 433 RLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTV 512 (535)
Q Consensus 433 rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V 512 (535)
.+.+++..|+...|...|++......+ ...-+..........|.|++..|+..
T Consensus 82 -----l~~~~~~~~~~~~A~~~~~~al~~~p~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 82 -----KSAAYRDMKNNQEYIATLTEGIKAVPG----------------------NATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp -----HHHHHHHTTCHHHHHHHHHHHHHHSTT----------------------CHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -----HHHHHHHcccHHHHHHHHHHHHHHCCC----------------------cHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 235566778888899999874332111 00012223334567789999999999
Q ss_pred HHHHHHHH
Q psy11025 513 AAEKAFKE 520 (535)
Q Consensus 513 ~A~~a~~~ 520 (535)
.|...+++
T Consensus 135 ~A~~~~~~ 142 (228)
T 4i17_A 135 KAEENYKH 142 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999987
No 95
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.92 E-value=0.028 Score=46.00 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 353 STVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 353 A~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
+..+...|.++.. .++++|+.+|.+|+++.... ..++...|.++...++|++|+.+|++........ .....
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQ 77 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHH
Confidence 3445555555554 46999999999999986433 4677888999999999999999999998776542 11111
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
........+.++...++...|...|++..
T Consensus 78 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 106 (131)
T 1elr_A 78 IAKAYARIGNSYFKEEKYKDAIHFYNKSL 106 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 12222233455667788888999998743
No 96
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.91 E-value=0.029 Score=53.50 Aligned_cols=22 Identities=23% Similarity=0.219 Sum_probs=18.4
Q ss_pred HHHHHHHhc----cCCHHHHHHHHHH
Q psy11025 499 VALVLVQLA----RGDTVAAEKAFKE 520 (535)
Q Consensus 499 l~a~lc~L~----~gD~V~A~~a~~~ 520 (535)
...+.|++. .+|...|...+++
T Consensus 222 ~~l~~~~~~g~~~~~~~~~A~~~~~~ 247 (273)
T 1ouv_A 222 FNLGAMQYNGEGVTRNEKQAIENFKK 247 (273)
T ss_dssp HHHHHHHHTTSSSSCCSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHH
Confidence 566888888 8999999888887
No 97
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.91 E-value=0.028 Score=59.63 Aligned_cols=57 Identities=12% Similarity=-0.039 Sum_probs=33.2
Q ss_pred HHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy11025 359 GAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 359 AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~ 421 (535)
.+.+|.+. ++++|+++|.++.++.... ...+...+.++.+.|++++|+++|++..+.
T Consensus 379 l~~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 379 VGIYYLCVNKISEARRYFSKSSTMDPQF------GPAWIGFAHSFAIEGEHDQAISAYTTAARL 436 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34444443 3677777777766643221 123445566666777777887777776543
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.016 Score=48.61 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
|...+..+-.++...++++|+.+|.+|+++.... ...+...|.++...++|++|++.|+++.+..-.. ..+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 3334445555556667999999999999986544 3678889999999999999999999987664322 12222
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
.+.++...|+...|...|++.-
T Consensus 78 -------lg~~~~~~~~~~~A~~~~~~al 99 (126)
T 3upv_A 78 -------KATAQIAVKEYASALETLDAAR 99 (126)
T ss_dssp -------HHHHHHHTTCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhCHHHHHHHHHHHH
Confidence 2355666788888999998743
No 99
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.90 E-value=0.0098 Score=50.40 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=72.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|..+|.++..... .......++...+.++... ++++|+.+|.+++.+.... ...+...
T Consensus 33 ~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~ 105 (148)
T 2dba_A 33 KEGNELFKCGDYGGALAAYTQALGLDA-TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD------VKALYRR 105 (148)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC------HHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC------HHHHHHH
Confidence 456666667778999999998876432 2222456677777777765 5999999999999985443 4567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~ 422 (535)
|.++...++|++|+++|++..+..
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcC
Confidence 899999999999999999876543
No 100
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.89 E-value=0.0045 Score=54.79 Aligned_cols=85 Identities=18% Similarity=0.038 Sum_probs=46.9
Q ss_pred hchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhh
Q psy11025 329 ADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~ 407 (535)
+++++|...|.+|.... ++ -...+..-|++|.+. ++++|+++|++|+++--.. ...+...|.++...++
T Consensus 11 ~~~e~ai~~~~~a~~~~---p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~------~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 11 ADVERYIASVQGSTPSP---RQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD------PKAHRFLGLLYELEEN 80 (150)
T ss_dssp HHHHHHHHHHHHHSCSH---HH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHhcccC---cc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCc
Confidence 44555555555554322 11 122233445555443 3667777777776664332 3455566666666677
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11025 408 FDKAADLIRQEIGYHQ 423 (535)
Q Consensus 408 y~~Aie~ye~~~~~~~ 423 (535)
|++|+..|+++.++.-
T Consensus 81 ~~~A~~~~~~al~~~p 96 (150)
T 4ga2_A 81 TDKAVECYRRSVELNP 96 (150)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHhCC
Confidence 7777777777666653
No 101
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.86 E-value=0.011 Score=52.20 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=73.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRN--------------REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE 385 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~--------------~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e 385 (535)
-+..|-+.+++.+|..+|.+|..+.... ...-+.+|...|.++.+. ++++|+.++.+|+++-...
T Consensus 17 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 17 KGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc
Confidence 3444555567899999999999885331 112356777778888765 4999999999999984332
Q ss_pred CcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 386 DNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 386 gr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.+.+...|.++...|+|++|++.|+++..+.-
T Consensus 97 ------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 97 ------EKALFRRAKARIAAWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred ------hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCC
Confidence 35777889999999999999999999876643
No 102
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.85 E-value=0.012 Score=53.69 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHH
Q psy11025 353 STVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAI 431 (535)
Q Consensus 353 A~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a 431 (535)
...|..+-..+...++++|+++|.+|+ .. -...+...|.++...++|++|++.|+++.+..... ..+..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~-----~~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~- 76 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ-----DP----HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQ- 76 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS-----SC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH-
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc-----CC----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHH-
Confidence 334555455555567999999999984 11 23588889999999999999999999987664321 12222
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCH
Q psy11025 432 GRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDT 511 (535)
Q Consensus 432 ~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~ 511 (535)
.+.+++..|+...|...|++......+..... ...+++ .+ ........+..+.|++..||.
T Consensus 77 ------lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~------~~~~~~-~~------~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 77 ------RGMLYYQTEKYDLAIKDLKEALIQLRGNQLID------YKILGL-QF------KLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEE------CGGGTB-CC------EEEHHHHHHHHHHHHHHTTCH
T ss_pred ------HHHHHHHcccHHHHHHHHHHHHHhCCCccHHH------HHHhcc-cc------CccchHHHHHHHHHHHHccCH
Confidence 23456667888889999988554332211000 000000 00 011123346778999999999
Q ss_pred HHHHHHHHH
Q psy11025 512 VAAEKAFKE 520 (535)
Q Consensus 512 V~A~~a~~~ 520 (535)
..|...+++
T Consensus 138 ~~A~~~~~~ 146 (213)
T 1hh8_A 138 KKAEEQLAL 146 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999987
No 103
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=96.84 E-value=0.012 Score=62.28 Aligned_cols=123 Identities=11% Similarity=0.047 Sum_probs=91.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC---------C-HHHHHHHHHHHHHHHhcCCcHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL---------K-SDAALTLYSRAADVAHGEDNYK 389 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~---------~-~~eAie~y~kAaely~~egr~~ 389 (535)
.-+.+|.+.+++.+|..+|.+|.... ++ +.++...+.++... + +++|+++|++|+++....
T Consensus 142 ~lg~~~~~~g~~~~A~~~~~~al~~~---p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---- 212 (474)
T 4abn_A 142 QLGEVYWKKGDVTSAHTCFSGALTHC---KN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD---- 212 (474)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTC---CC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhC---CC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC----
Confidence 45677888888888888888887653 44 36778888888775 5 899999999999986554
Q ss_pred HHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHHHHH---H-hhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 390 QAAEYISRAARMCVRV--------KEFDKAADLIRQEIGYHQ---E-SEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 390 ~Aa~~l~kaAel~e~~--------~~y~~Aie~ye~~~~~~~---a-~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
...+...|.++... ++|++|++.|+++.+..- . ...+...+ .++...|+...|...|++
T Consensus 213 --~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg-------~~~~~~g~~~~A~~~~~~ 283 (474)
T 4abn_A 213 --GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRA-------TLHKYEESYGEALEGFSQ 283 (474)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHH-------HHHHHTTCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHH-------HHHHHcCCHHHHHHHHHH
Confidence 34677888888888 999999999999987643 1 12233322 455567888889999987
Q ss_pred hhh
Q psy11025 458 WGN 460 (535)
Q Consensus 458 ~~~ 460 (535)
...
T Consensus 284 al~ 286 (474)
T 4abn_A 284 AAA 286 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 104
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=96.83 E-value=0.0083 Score=49.73 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=74.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|..+|.++......+ ..++...+.++... ++++|+.+|++|+++.... ...+...
T Consensus 21 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l 90 (133)
T 2lni_A 21 NKGNECFQKGDYPQAMKHYTEAIKRNPKD----AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF------IKGYTRK 90 (133)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHTTCTTC----HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc------hHHHHHH
Confidence 56777778888999999999987654333 34577777777765 4999999999999985443 3567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
|.++...++|++|+++|++..+...
T Consensus 91 a~~~~~~~~~~~A~~~~~~~~~~~p 115 (133)
T 2lni_A 91 AAALEAMKDYTKAMDVYQKALDLDS 115 (133)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999876543
No 105
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.76 E-value=0.016 Score=62.23 Aligned_cols=111 Identities=17% Similarity=0.070 Sum_probs=54.7
Q ss_pred chHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhH
Q psy11025 330 DVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEF 408 (535)
Q Consensus 330 ~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y 408 (535)
++.+|..+|.+|....-.+ +.++...|.++.. .++++|+++|++|.++.... ...+...|.++...++|
T Consensus 4 ~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 4 DGPRELLQLRAAVRHRPQD----FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH------PEAVARLGRVRWTQQRH 73 (568)
T ss_dssp -----------------CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC------HHHHHHHHHHHHHTTCH
T ss_pred cHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHCCCH
Confidence 4455555555554433222 1234444555544 34777787887777764332 34566677777777788
Q ss_pred HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 409 DKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 409 ~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
++|++.|+++.+..-.. ..+... ..+++..|+...|...|++
T Consensus 74 ~~A~~~~~~al~~~p~~~~~~~~l-------a~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEHPGIALWL-------GHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHH-------HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHH-------HHHHHHcCCHHHHHHHHHH
Confidence 88888877776553221 112222 2345556676667777765
No 106
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.76 E-value=0.018 Score=47.08 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=63.8
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+..|...+++.+|...|.++......+ +.++...+.++... ++++|+++|.+++.+.... ...+...|
T Consensus 18 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~~ 87 (131)
T 2vyi_A 18 EGNEQMKVENFEAAVHFYGKAIELNPAN----AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY------SKAYGRMG 87 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHcCCCC----HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC------HHHHHHHH
Confidence 4455555666788888888877654333 23455666666554 4888888888888874333 34667778
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~ 422 (535)
.++...++|++|+++|++..+..
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhCCHHHHHHHHHHHHhcC
Confidence 88888888888888888876553
No 107
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.76 E-value=0.019 Score=68.90 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=62.6
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHH-------------HhcCCcHHHHHHH--------HH
Q psy11025 339 KQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADV-------------AHGEDNYKQAAEY--------IS 396 (535)
Q Consensus 339 ~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAael-------------y~~egr~~~Aa~~--------l~ 396 (535)
.+|.++|.+..+ ...|.+.++++++.+ .++|+++|..|... |...++.....++ +.
T Consensus 1122 kEAIdsYiKAdD--~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~ 1199 (1630)
T 1xi4_A 1122 KEAIDSYIKADD--PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ 1199 (1630)
T ss_pred HHHHHHHHhcCC--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHH
Confidence 444444443222 234666777888765 99999999887732 3333554432222 34
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
++|..++..|+|++|+.+|..+. .+.+.+.+ +++| |+...|+.++++
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~kA~-------ny~rLA~t-----LvkL--ge~q~AIEaarK 1246 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNNVS-------NFGRLAST-----LVHL--GEYQAAVDGARK 1246 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHhhh-------HHHHHHHH-----HHHh--CCHHHHHHHHHH
Confidence 57777777888888888888752 33333322 4455 566668888875
No 108
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.70 E-value=0.015 Score=50.40 Aligned_cols=92 Identities=13% Similarity=0.032 Sum_probs=65.6
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+..|.+.+++.+|...|.++....-.+. ..+...+.++... ++++|+.+|.+|+.+..... ..+...|.
T Consensus 25 a~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~lg~ 94 (142)
T 2xcb_A 25 GFNQYQAGKWDDAQKIFQALCMLDHYDA----RYFLGLGACRQSLGLYEQALQSYSYGALMDINEP------RFPFHAAE 94 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------HHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHHhCCccH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc------HHHHHHHH
Confidence 4445555668888888888876543332 2455566666655 49999999999998865442 34567788
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 401 MCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 401 l~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
++...|+|++|++.|+++.+..-
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC
Confidence 88888999999999998876654
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.69 E-value=0.025 Score=57.03 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=75.2
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCH-----------HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNR-----------EAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNY 388 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~-----------~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~ 388 (535)
-+.+|.+.+++.+|..+|.+|..+..... ..-+.+|...|.+|.+.+ +++|+.+|.+|+++....
T Consensus 153 ~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~--- 229 (336)
T 1p5q_A 153 RGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN--- 229 (336)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---
Confidence 34555566778899999999988865431 112567888888887764 999999999999985443
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
...+...|.++...++|++|++.|+++.++.
T Consensus 230 ---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 230 ---EKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 4567888999999999999999999987664
No 110
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.68 E-value=0.068 Score=45.97 Aligned_cols=95 Identities=16% Similarity=0.172 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 353 STVLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 353 A~~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
+..+...|.++- ..++++|+.+|.+|+++.... ..++...|.++...++|++|++.|++..+..... ..+..
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 444555555554 456999999999999986543 4677888999999999999999999987765332 11222
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.+.+....|+...|...|++...
T Consensus 87 -------~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 87 -------RAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp -------HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHhccHHHHHHHHHHHHH
Confidence 23456667888889999987433
No 111
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.68 E-value=0.01 Score=52.42 Aligned_cols=99 Identities=8% Similarity=0.031 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hh
Q psy11025 348 NREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE-SE 426 (535)
Q Consensus 348 ~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a-~e 426 (535)
.+..+...+..+...+...++++|+.+|.+|+.+.... ...+...|.++...|+|++|++.|+++....-. ..
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 90 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPR 90 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCch
Confidence 34444444444444444455777777777777664332 234456666777777777777777776554322 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 427 HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 427 ~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
.+... +.|++..|+...|...|++..
T Consensus 91 ~~~~l-------g~~~~~~g~~~~A~~~~~~al 116 (148)
T 2vgx_A 91 FPFHA-------AECLLQXGELAEAESGLFLAQ 116 (148)
T ss_dssp HHHHH-------HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHH-------HHHHHHcCCHHHHHHHHHHHH
Confidence 22222 244555666666777776643
No 112
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.66 E-value=0.027 Score=49.72 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=68.2
Q ss_pred HHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHH
Q psy11025 354 TVLEKGAKSL-EELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAI 431 (535)
Q Consensus 354 ~~l~~AAk~~-ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a 431 (535)
..+...+.++ ...++++|+++|.+|+++.... ..++...|.++...++|++|++.|+++.++.-.. ..+...
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN------PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3444444444 4556999999999999987554 4678889999999999999999999997765332 122222
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 432 GRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 432 ~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
..++...++...|...|++.-.
T Consensus 86 -------g~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 86 -------GLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp -------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred -------HHHHHHccCHHHHHHHHHHHHH
Confidence 3456667888889999987444
No 113
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.66 E-value=0.021 Score=48.07 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=70.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|..+|.+|......+ +.++...+.++... ++++|+.+|.+|+.+.... ...+...
T Consensus 14 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l 83 (137)
T 3q49_B 14 EQGNRLFVGRKYPEAAACYGRAITRNPLV----AVYYTNRALCYLKMQQPEQALADCRRALELDGQS------VKAHFFL 83 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhCcCc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh------HHHHHHH
Confidence 45666777778888888888887765333 23566667777665 4889999999998876443 3467778
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
|.++...++|++|++.|+++.+..-.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 88888889999999999888766543
No 114
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.65 E-value=0.016 Score=51.24 Aligned_cols=93 Identities=11% Similarity=0.024 Sum_probs=70.0
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+..|.+.+++.+|..+|.+|....-.+. ..+...+.++... ++++|+.+|.+|+.+.-... ..+...|
T Consensus 27 ~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~------~~~~~lg 96 (148)
T 2vgx_A 27 LAFNQYQSGXYEDAHXVFQALCVLDHYDS----RFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP------RFPFHAA 96 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------HHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHcCcccH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc------hHHHHHH
Confidence 34455566678899999999876543332 3455667777665 59999999999999865442 3567789
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.++...|++++|++.|+++.++..
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCc
Confidence 999999999999999999876654
No 115
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.64 E-value=0.083 Score=42.90 Aligned_cols=124 Identities=14% Similarity=0.087 Sum_probs=82.2
Q ss_pred HHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy11025 356 LEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRL 434 (535)
Q Consensus 356 l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl 434 (535)
+...+.++. ..++++|+.+|.++.+..... ...+..+|.++...+++++|+++|++.......... .
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~ 71 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE------A 71 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH------H
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH------H
Confidence 334444444 356999999999998874332 346667888888899999999999998765432211 1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHH
Q psy11025 435 AVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAA 514 (535)
Q Consensus 435 ~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A 514 (535)
....+.+....++...|...|++....... . ....+..+.+++..||...|
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-------------------------~----~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELDPR-------------------------S----AEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-------------------------C----HHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-------------------------C----hHHHHHHHHHHHHHccHHHH
Confidence 111234566778888898888863321000 0 11234567888899999999
Q ss_pred HHHHHH
Q psy11025 515 EKAFKE 520 (535)
Q Consensus 515 ~~a~~~ 520 (535)
...+++
T Consensus 123 ~~~~~~ 128 (136)
T 2fo7_A 123 IEYYQK 128 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
No 116
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.63 E-value=0.026 Score=45.70 Aligned_cols=93 Identities=15% Similarity=0.211 Sum_probs=63.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|...+++.+|...|.++......+. ..+...+.++... ++++|+.+|.+++++.... ...+...
T Consensus 14 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l 83 (125)
T 1na0_A 14 NLGNAYYKQGDYDEAIEYYQKALELDPNNA----EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNL 83 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCcH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc------HHHHHHH
Confidence 345667777778888888888776543222 2455556666554 4888888888888764332 2456677
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~ 422 (535)
|.++...+++++|+.+|++..+..
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhC
Confidence 888888888888888888775543
No 117
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.61 E-value=0.02 Score=45.97 Aligned_cols=89 Identities=11% Similarity=0.074 Sum_probs=46.6
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+..|...+++.+|..+|.++......+. ..+..-+.++.. .++++|+.+|.+++++.... ...+...|.
T Consensus 11 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~ 80 (118)
T 1elw_A 11 GNKALSVGNIDDALQCYSEAIKLDPHNH----VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW------GKGYSRKAA 80 (118)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcH----HHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc------HHHHHHHHH
Confidence 4444555556666666666555432221 233334444433 34666666666666654322 234555566
Q ss_pred HHHHhhhHHHHHHHHHHHHH
Q psy11025 401 MCVRVKEFDKAADLIRQEIG 420 (535)
Q Consensus 401 l~e~~~~y~~Aie~ye~~~~ 420 (535)
++...++|++|++.|++..+
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHhhHHHHHHHHHHHHH
Confidence 66666666666666665543
No 118
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.61 E-value=0.025 Score=52.00 Aligned_cols=109 Identities=18% Similarity=0.128 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-------CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 351 AASTVLEKGAKSLEELKSDAALTLYSRAADVAHG-------EDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 351 ~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~-------egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.|..++..+-.+++..++++|+.+|.+|+++-.. .-.+ .-+.++...|..+...|+|++|++.|+++.++|.
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~-~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAG-FDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhcc-chHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 3455566666666677899999999999999766 2111 1233888888899999999999999999998743
Q ss_pred Hh-hH---HHHHH-HHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 424 ES-EH---LLAIG-RLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 424 a~-e~---~~~a~-rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.. +. ...+. +.+.-.+++....|+...|..+|++...
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 21 00 11110 0001122344455666669999998443
No 119
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.57 E-value=0.03 Score=46.51 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=69.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLA 435 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~ 435 (535)
|..|-..+...++++|+.+|.++++.+.... .+...+...|.++...|+|++|++.|++..+..-.......+ .
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~---~ 79 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGV---YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGG---L 79 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSST---THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHH---H
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc---ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHH---H
Confidence 4444445555679999999999999876553 334677788999999999999999999988765443221111 1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 436 VALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 436 la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+..+.|+...|+...|...|+++..
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1123556677888889999987544
No 120
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.56 E-value=0.047 Score=53.69 Aligned_cols=94 Identities=13% Similarity=0.081 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy11025 355 VLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGR 433 (535)
Q Consensus 355 ~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~r 433 (535)
.+..-+.++... ++++|.++|++|+++..... . ..+...+.++.+.|++++|..+|+++.+..-.. ..
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~ 169 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP--T---LVYIQYMKFARRAEGIKSGRMIFKKAREDARTR------HH 169 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--H---HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC------TH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCc--c---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HH
Confidence 445555566554 48899999999988543321 1 266777788888899999999999886542111 11
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHHHhh
Q psy11025 434 LAVALVLVQL-ARGDTVAAEKAFKEWG 459 (535)
Q Consensus 434 l~la~il~~L-~~~D~vaA~~~~e~~~ 459 (535)
+.++.+.+.. ..|+...|..+|++.-
T Consensus 170 ~~~~~a~~~~~~~~~~~~A~~~~~~al 196 (308)
T 2ond_A 170 VYVTAALMEYYCSKDKSVAFKIFELGL 196 (308)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 1122122222 2578877888888743
No 121
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.51 E-value=0.023 Score=59.26 Aligned_cols=129 Identities=16% Similarity=0.160 Sum_probs=82.4
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+.+|.+.+++.+|...|.++......+. .++...+.++... ++++|+.+|++|+++.............+...|.
T Consensus 351 a~~~~~~g~~~~A~~~~~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~ 426 (537)
T 3fp2_A 351 ACLLYKQGKFTESEAFFNETKLKFPTLP----EVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKAT 426 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCT----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCh----HHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHH
Confidence 3444444455666666666655543332 2344556666655 4899999999999987655443333334455667
Q ss_pred HHHHh----------hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 401 MCVRV----------KEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 401 l~e~~----------~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
++... ++|++|+.+|++..+....... .....+.+++..|+...|...|++...
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~------~~~~l~~~~~~~g~~~~A~~~~~~al~ 490 (537)
T 3fp2_A 427 ILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQ------AKIGLAQLKLQMEKIDEAIELFEDSAI 490 (537)
T ss_dssp HHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 77777 9999999999998766433211 112223456667888889999998544
No 122
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.50 E-value=0.026 Score=59.93 Aligned_cols=94 Identities=7% Similarity=0.012 Sum_probs=75.4
Q ss_pred chHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHh---cCCcHHHHHHHHHHHHHH
Q psy11025 330 DVAHGEDNYKQAAEYISR----NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAH---GEDNYKQAAEYISRAARM 401 (535)
Q Consensus 330 ~~~eAa~af~kAA~~y~~----~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~---~egr~~~Aa~~l~kaAel 401 (535)
+|.+|...|++|-..+.+ ..-.-+.+|...|.+|... ++++|..+|++|.+++. +.+-++ -+..+.++|.+
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~ 391 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRL 391 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHH
Confidence 378999999999988865 2223677888899999876 49999999999999965 344444 45567799999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 402 CVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 402 ~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
|-..|+|++|..+|+++.+.+..
T Consensus 392 ~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 392 YMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998766643
No 123
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.49 E-value=0.03 Score=60.15 Aligned_cols=122 Identities=9% Similarity=-0.034 Sum_probs=85.8
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.+|.+.+++.+|...|.+|....-.+ +.++...|.++... ++++|+++|++|+++.... ...+...
T Consensus 28 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l 97 (568)
T 2vsy_A 28 MLADAELGMGDTTAGEMAVQRGLALHPGH----PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH------PGIALWL 97 (568)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC------HHHHHHH
Confidence 45667777778888888888887654333 33566667777665 4999999999999985443 4577788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLAR---GDTVAAEKAFKEW 458 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~---~D~vaA~~~~e~~ 458 (535)
|.++...++|++|++.|+++.+..-.. ..+... ..++... ++...|...|++.
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l-------~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQL-------LNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH-------HHHHHHTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH-------HHHHHHhhccccHHHHHHHHHHH
Confidence 999999999999999999987664322 112222 2334455 7777787777763
No 124
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.49 E-value=0.019 Score=50.62 Aligned_cols=97 Identities=11% Similarity=0.104 Sum_probs=66.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC------c------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGED------N------YKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~eg------r------~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
...+-.+++..++++|+.+|.+|++++.... . ...-..++...|.++...++|++|+..|+++.++--
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p 94 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREE 94 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCC
Confidence 3444444555679999999999999854321 0 123356788899999999999999999999876632
Q ss_pred Hh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 424 ES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 424 a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
.. ..+... +.|++..|+...|...|++.-
T Consensus 95 ~~~~a~~~~-------g~~~~~~g~~~~A~~~~~~al 124 (162)
T 3rkv_A 95 TNEKALFRR-------AKARIAAWKLDEAEEDLKLLL 124 (162)
T ss_dssp TCHHHHHHH-------HHHHHHTTCHHHHHHHHHHHH
T ss_pred cchHHHHHH-------HHHHHHHhcHHHHHHHHHHHH
Confidence 21 112222 355666788888999998743
No 125
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.46 E-value=0.028 Score=51.19 Aligned_cols=95 Identities=8% Similarity=0.098 Sum_probs=72.1
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHH------------HHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNRE------------AASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNY 388 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~------------~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~ 388 (535)
+..|.+.+++.+|..+|.+|..+....++ ..+.++...|.++... ++++|+.+|.+|+++....
T Consensus 45 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~--- 121 (198)
T 2fbn_A 45 GNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN--- 121 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc---
Confidence 44444555688999999999876544331 1246777888888765 4999999999999985433
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
...+...|.++...++|++|++.|+++.+..
T Consensus 122 ---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 122 ---VKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp ---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ---HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 3567888999999999999999999987664
No 126
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.40 E-value=0.049 Score=55.97 Aligned_cols=100 Identities=8% Similarity=-0.016 Sum_probs=63.6
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC-H----HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcH--HHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN-R----EAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNY--KQAAE 393 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~-~----~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~--~~Aa~ 393 (535)
+-.|..-|++++|.++|.+|.++..+. + -..+.+|..-|.+|...+ .++|+.+|++|.++....... ..-+.
T Consensus 58 g~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~ 137 (472)
T 4g1t_A 58 AYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPE 137 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHH
Confidence 445566677888999999988887541 1 124556777777777654 899999999998886543211 01122
Q ss_pred HHHHHHH--HHHHhhhHHHHHHHHHHHHHH
Q psy11025 394 YISRAAR--MCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 394 ~l~kaAe--l~e~~~~y~~Aie~ye~~~~~ 421 (535)
.+...+- +....++|++|++.|+++.+.
T Consensus 138 ~~~~~g~~~~~~~~~~y~~A~~~~~kal~~ 167 (472)
T 4g1t_A 138 LDCEEGWTRLKCGGNQNERAKVCFEKALEK 167 (472)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 3333332 223346788888888887654
No 127
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.40 E-value=0.08 Score=49.28 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=74.3
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL----KSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~----~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
+.+|..-+++.+|...|.+|++. .. +.++...+.+|... ++++|+.+|++|++. |. ...+..
T Consensus 25 g~~~~~~~~~~~A~~~~~~a~~~--g~----~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~----g~----~~a~~~ 90 (212)
T 3rjv_A 25 ADTWVSSGDYQKAEYWAQKAAAQ--GD----GDALALLAQLKIRNPQQADYPQARQLAEKAVEA----GS----KSGEIV 90 (212)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHT--TC----HHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHT----TC----HHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHc--CC----HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHC----CC----HHHHHH
Confidence 34444445566677777776542 12 23455566667665 689999999999764 22 235567
Q ss_pred HHHHHHH----hhhHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHh
Q psy11025 398 AARMCVR----VKEFDKAADLIRQEIGYHQE---SEHLLAIGRLAVALVLVQLA----RGDTVAAEKAFKEW 458 (535)
Q Consensus 398 aAel~e~----~~~y~~Aie~ye~~~~~~~a---~e~~~~a~rl~la~il~~L~----~~D~vaA~~~~e~~ 458 (535)
+|.++.. .+++++|+++|+++++.-.. .......+ .+++. ..|...|...|++-
T Consensus 91 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg-------~~y~~g~g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 91 LARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLG-------LIYASGVHGPEDDVKASEYFKGS 155 (212)
T ss_dssp HHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHH-------HHHHHTSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHH-------HHHHcCCCCCCCHHHHHHHHHHH
Confidence 7888876 67999999999999765431 12222222 33444 56888898888863
No 128
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.35 E-value=0.024 Score=58.35 Aligned_cols=95 Identities=12% Similarity=0.149 Sum_probs=72.5
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhC------------HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRN------------REAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNY 388 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~------------~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~ 388 (535)
+..|.+.+++.+|..+|.+|..+.... ...-+.+|...|.+|.+. ++++|+++|.+|+++....
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~--- 306 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN--- 306 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh---
Confidence 444445566889999999999865432 223466777778888765 4999999999999874332
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
.+.+-..|.++...++|++|++.|+++.++.
T Consensus 307 ---~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 307 ---TKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4667788999999999999999999987664
No 129
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.32 E-value=0.007 Score=48.43 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=49.6
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+.+|.+.+++.+|..+|.++........ ..+...|.++... ++++|+++|++|+++.... .-...+...|
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~~l~ 83 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEKAIQLDPEES----KYWLMKGKALYNLERYEEAVDCYNYVINVIEDE----YNKDVWAAKA 83 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCT----TCHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCcCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc----chHHHHHHHH
Confidence 34555555666666666666655432221 2344444555443 3666777776666654330 0123555666
Q ss_pred HHHHHh-hhHHHHHHHHHHHH
Q psy11025 400 RMCVRV-KEFDKAADLIRQEI 419 (535)
Q Consensus 400 el~e~~-~~y~~Aie~ye~~~ 419 (535)
.++... +++++|++++++..
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHG
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 666666 66666666666654
No 130
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.29 E-value=0.38 Score=50.32 Aligned_cols=22 Identities=27% Similarity=0.111 Sum_probs=15.2
Q ss_pred HHHHHHHhc----cCCHHHHHHHHHH
Q psy11025 499 VALVLVQLA----RGDTVAAEKAFKE 520 (535)
Q Consensus 499 l~a~lc~L~----~gD~V~A~~a~~~ 520 (535)
...+.|+.. .+|...|...|++
T Consensus 403 ~~Lg~~y~~g~g~~~d~~~A~~~~~~ 428 (490)
T 2xm6_A 403 VQLGEIYYYGLGVERDYVQAWAWFDT 428 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 345666665 6788888777765
No 131
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.29 E-value=0.036 Score=48.45 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHH
Q psy11025 367 KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVR----VKEFDKAADLIRQEIG 420 (535)
Q Consensus 367 ~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~----~~~y~~Aie~ye~~~~ 420 (535)
++++|+.+|++|++. |. ...+..++.+|.. .+++++|+++|+++++
T Consensus 76 d~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 76 DLRKAAQYYSKACGL----ND----QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp CHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcC----CC----HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 466666666666654 21 1234455566665 4566666666666543
No 132
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.27 E-value=0.077 Score=45.72 Aligned_cols=100 Identities=14% Similarity=0.117 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-h
Q psy11025 348 NREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-E 426 (535)
Q Consensus 348 ~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e 426 (535)
.+..+...+..|...+...++++|+.+|.+++.+.-.. ...+...|.++...++|++|+..|+++....-.. .
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD------ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence 45555555666666666667999999999999875443 3466778889999999999999999997664322 2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 427 HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 427 ~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.+... +.|++..|+...|...|++...
T Consensus 88 ~~~~l-------g~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 88 FPFHA-------AECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHH-------HHHHHHcCCHHHHHHHHHHHHH
Confidence 22222 3556677888889999987443
No 133
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.20 E-value=0.035 Score=54.64 Aligned_cols=84 Identities=12% Similarity=0.038 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--H---HhhHHHHHHHHHHHHHH
Q psy11025 366 LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH--Q---ESEHLLAIGRLAVALVL 440 (535)
Q Consensus 366 ~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~--~---a~e~~~~a~rl~la~il 440 (535)
.++++|+.+|++|++.+... ...+...+.++...|++++|..+|+++.... . ....+...+ .
T Consensus 183 ~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~-------~ 249 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKYGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFL-------A 249 (308)
T ss_dssp CCHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHH-------H
T ss_pred CCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHH-------H
Confidence 35778888888888876543 3566777788888899999999999987642 1 112222222 2
Q ss_pred HHHhcCCHHHHHHHHHHhhhcc
Q psy11025 441 VQLARGDTVAAEKAFKEWGNCC 462 (535)
Q Consensus 441 ~~L~~~D~vaA~~~~e~~~~~~ 462 (535)
.....|+...|..++++....+
T Consensus 250 ~~~~~g~~~~a~~~~~~a~~~~ 271 (308)
T 2ond_A 250 FESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHHc
Confidence 2334578877888888754433
No 134
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.19 E-value=0.048 Score=47.98 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=62.5
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 322 LTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 322 A~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+.+|.+.+++.+|..+|.+|....-++ +.++..-+.+|...+ +++|+.+|++|+++.-.. ...+...|.
T Consensus 38 a~~y~~~~~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~ 107 (150)
T 4ga2_A 38 AKLYYEAKEYDLAKKYICTYINVQERD----PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ------KDLVLKIAE 107 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC------HHHHHHHHH
Confidence 344444444566666666666543222 345777788887764 999999999999885443 356788899
Q ss_pred HHHHhhhHHHHHHHH-HHHHHHH
Q psy11025 401 MCVRVKEFDKAADLI-RQEIGYH 422 (535)
Q Consensus 401 l~e~~~~y~~Aie~y-e~~~~~~ 422 (535)
++...+++.+|++.| +++.++.
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~ 130 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLF 130 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHS
T ss_pred HHHHcCChHHHHHHHHHHHHHhC
Confidence 999889998888765 6665544
No 135
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.19 E-value=0.12 Score=41.29 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=65.9
Q ss_pred HHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHH
Q psy11025 355 VLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIG 432 (535)
Q Consensus 355 ~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~ 432 (535)
.+...+.++. ..++++|+.+|++++.+.... ...+...|.++...++|++|++.|++..+..... ..+..
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-- 77 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHN------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSR-- 77 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH--
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHH--
Confidence 3444455554 456999999999999986543 4577888889999999999999999987664321 11222
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 433 RLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 433 rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.+.+....|+...|...|++...
T Consensus 78 -----~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 78 -----KAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp -----HHHHHHHTTCHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHhhHHHHHHHHHHHHH
Confidence 22455667888889999987433
No 136
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.18 E-value=0.29 Score=51.28 Aligned_cols=185 Identities=12% Similarity=0.049 Sum_probs=118.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR-NREAASTVLEKGAKSLEEL--KSDAALTLYSRAADVAHGEDNYKQAAEYIS 396 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~-~~~~AA~~l~~AAk~~ek~--~~~eAie~y~kAaely~~egr~~~Aa~~l~ 396 (535)
+-+++|.+.++..+-++++...-..+.. ++.-+++....-...+... ..+.-+++..+++++-..+.|.=---..-.
T Consensus 24 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~ 103 (394)
T 3txn_A 24 QQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQSLEA 103 (394)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666555555554433333 4455677666666666653 367788999999999888866433333344
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccccccc
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGSSSFS 476 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre~~~l 476 (535)
+.|.+|...|+|.+|.+++.+..+.+...+.-...-.+++-.+-++...++...+..+|.+-.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~----------------- 166 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSAR----------------- 166 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHH-----------------
Confidence 889999999999999999998877765432211111222223344556778877877776511
Q ss_pred ccccccchhhhh-hhHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHH-hcCCCCc
Q psy11025 477 FSLGKAGYHQES-EHLLAIGRLAVALVLVQL-ARGDTVAAEKAFKE-WGNCCEA 527 (535)
Q Consensus 477 ~~L~l~ay~~~~-~~~~~~~~l~l~a~lc~L-~~gD~V~A~~a~~~-~~~F~~s 527 (535)
.....+ -.+...+.+....|+.|| +.+|+-.|-..|=+ +.+|.+.
T Consensus 167 ------~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~ 214 (394)
T 3txn_A 167 ------TTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSV 214 (394)
T ss_dssp ------HHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTT
T ss_pred ------hhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccccc
Confidence 111111 235667777888999999 89999999888866 5566543
No 137
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.16 E-value=0.12 Score=42.06 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 353 STVLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 353 A~~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
+..+...+.++. ..++++|+++|.+++.+.... ...+...|.++...++|++|++.|++..+..... ..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN------AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 344444455554 456999999999999885443 4577888999999999999999999987664322 11222
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
.+.+....++...|...|++.
T Consensus 86 -------~~~~~~~~~~~~~A~~~~~~~ 106 (131)
T 2vyi_A 86 -------MGLALSSLNKHVEAVAYYKKA 106 (131)
T ss_dssp -------HHHHHHHTTCHHHHHHHHHHH
T ss_pred -------HHHHHHHhCCHHHHHHHHHHH
Confidence 224555678888899999874
No 138
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.14 E-value=0.24 Score=51.94 Aligned_cols=96 Identities=16% Similarity=0.082 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHhchHHHHHHHHHHHHHHHh------CHHHHHHHHH------------HHHHHHHh-----CCHHHHHH
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYKQAAEYISR------NREAASTVLE------------KGAKSLEE-----LKSDAALT 373 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~kAA~~y~~------~~~~AA~~l~------------~AAk~~ek-----~~~~eAie 373 (535)
.++.|..+|++|+....+ .++...+.+|.. +...|...|. ..+.+|.. .+.++|++
T Consensus 94 ~~~~A~~~~~~a~~~~~~-~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~ 172 (490)
T 2xm6_A 94 DYAQAVIWYKKAALKGLP-QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMARE 172 (490)
T ss_dssp CHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCH-HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 557888888888753221 122223333322 2233333333 33445553 35888888
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHH
Q psy11025 374 LYSRAADVAHGEDNYKQAAEYISRAARMCVR----VKEFDKAADLIRQEIGY 421 (535)
Q Consensus 374 ~y~kAaely~~egr~~~Aa~~l~kaAel~e~----~~~y~~Aie~ye~~~~~ 421 (535)
+|++|++. |. ...+..++.++.. .+++++|+++|+++.+.
T Consensus 173 ~~~~a~~~----~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 173 WYSKAAEQ----GN----VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp HHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHC----CC----HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 88888874 21 3455566777776 57888888888877643
No 139
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.13 E-value=0.11 Score=51.27 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy11025 355 VLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGR 433 (535)
Q Consensus 355 ~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~r 433 (535)
++...+.++.+.+ +++|+.+|+++.++.... . -.....-...++...++|++|+.+|++..+.+-.. ..
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~--~--~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~------~~ 201 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDA--T--LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPT------LL 201 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H--HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCC------HH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc--H--HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCc------HH
Confidence 4445566666654 888888888888774221 1 11111111233344589999999999987764321 11
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 434 LAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 434 l~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
++...++|.+..|+...|...|++.
T Consensus 202 ~~~~la~~~~~~g~~~eA~~~l~~a 226 (291)
T 3mkr_A 202 LLNGQAACHMAQGRWEAAEGVLQEA 226 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2222335666778888899999873
No 140
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.11 E-value=0.073 Score=44.59 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=67.0
Q ss_pred HHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHH
Q psy11025 355 VLEKGAKSL-EELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIG 432 (535)
Q Consensus 355 ~l~~AAk~~-ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~ 432 (535)
.+...|.++ ...++++|+.+|.+|+.+.... ..++...|.++...++|++|+..|+++.+..... ..+..
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-- 82 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF-- 82 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH--
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH--
Confidence 344444444 4456999999999999986543 4578888999999999999999999987764331 11222
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 433 RLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 433 rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
...+.+..|+...|...|++.-.
T Consensus 83 -----l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 83 -----LGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp -----HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhhHHHHHHHHHHHHH
Confidence 23556667888889999987433
No 141
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.08 E-value=0.014 Score=48.74 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=60.3
Q ss_pred hchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhh
Q psy11025 329 ADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~ 407 (535)
+++.+|..+|.+|.......+. -+.++..-+.++... ++++|+.+|++|+++.... ...+...|.++...|+
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~ 76 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH------QALRVFYAMVLYNLGR 76 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------hHHHHHHHHHHHHcCC
Confidence 3455666777766553100122 345566667777665 4999999999999986554 4567778889999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11025 408 FDKAADLIRQEIGYH 422 (535)
Q Consensus 408 y~~Aie~ye~~~~~~ 422 (535)
|++|++.|++.....
T Consensus 77 ~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 77 YEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999886554
No 142
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.04 E-value=0.12 Score=52.11 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=66.6
Q ss_pred HHHHH-HhCCHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hH
Q psy11025 359 GAKSL-EELKSDAALTLYSRAADVAHGED---------NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EH 427 (535)
Q Consensus 359 AAk~~-ek~~~~eAie~y~kAaely~~eg---------r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~ 427 (535)
.+.++ ...++++|+.+|.+|+++..... ....-+.++...|.++...++|++|++.|+++.++.-.. ..
T Consensus 153 ~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a 232 (336)
T 1p5q_A 153 RGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKG 232 (336)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 34333 44568999999999999876552 112225788889999999999999999999997764321 12
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 428 LLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 428 ~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+... ..+++..++...|...|++...
T Consensus 233 ~~~l-------g~~~~~~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 233 LSRR-------GEAHLAVNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHH-------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHH-------HHHHHHCCCHHHHHHHHHHHHH
Confidence 2222 3456667888889999987544
No 143
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.98 E-value=0.16 Score=54.71 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=72.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC-Cc-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHHH
Q psy11025 355 VLEKGAKSLEELKSDAALTLYSRAADVAHGE-DN-YKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLLA 430 (535)
Q Consensus 355 ~l~~AAk~~ek~~~~eAie~y~kAaely~~e-gr-~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~~ 430 (535)
.+.+|.+...+.++++|+.+|++|.++.... |. .-.-+..+..+|.+|...|+|++|+.+|+++...+... .....
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 391 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ 391 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 4445545555566999999999999997543 22 23567888999999999999999999999998887652 11111
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
.+..+.-+..++..+|+...|...|++
T Consensus 392 ~a~~l~nLa~~~~~~G~~~eA~~~~~~ 418 (490)
T 3n71_A 392 LGMAVMRAGLTNWHAGHIEVGHGMICK 418 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 222222233556667888889988887
No 144
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.98 E-value=0.028 Score=59.42 Aligned_cols=100 Identities=10% Similarity=-0.023 Sum_probs=77.3
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHh---cCCcHHHHHHHH
Q psy11025 324 LYSRAADVAHGEDNYKQAAEYISR----NREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAH---GEDNYKQAAEYI 395 (535)
Q Consensus 324 lYekAA~~~eAa~af~kAA~~y~~----~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~---~egr~~~Aa~~l 395 (535)
-|.+.+.|.+|...|+++-..+.+ ..-.-+.++...+..|... ++++|+.+|++|.++|. +..-+. -+..+
T Consensus 296 ~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l 374 (429)
T 3qwp_A 296 ELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQV 374 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHH
Confidence 344446688899889888776644 2224677888888888765 59999999999999974 344444 45677
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
.++|.+|...|+|++|..+|+++.+.+..
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999877654
No 145
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.97 E-value=0.055 Score=49.24 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=62.9
Q ss_pred HHHhCCHHHHHHHHHHHHHHHhcCCc----------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 362 SLEELKSDAALTLYSRAADVAHGEDN----------YKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 362 ~~ek~~~~eAie~y~kAaely~~egr----------~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
++...++++|+.+|.+|+++...... ......++...|.++...++|++|+..|+++.+..... ..+..
T Consensus 48 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 127 (198)
T 2fbn_A 48 FFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYK 127 (198)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 33445688888899988887654431 11124788899999999999999999999987764321 11222
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
. ..+++..++...|...|++...
T Consensus 128 l-------g~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 128 L-------GVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp H-------HHHHHHHTCHHHHHHHHHHHHH
T ss_pred H-------HHHHHHcccHHHHHHHHHHHHH
Confidence 2 2445566788779999987433
No 146
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.96 E-value=0.051 Score=57.35 Aligned_cols=92 Identities=11% Similarity=0.136 Sum_probs=71.6
Q ss_pred HHHHhchHHHHHHHHHHHHHHHhCH-----------HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHH
Q psy11025 325 YSRAADVAHGEDNYKQAAEYISRNR-----------EAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAA 392 (535)
Q Consensus 325 YekAA~~~eAa~af~kAA~~y~~~~-----------~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa 392 (535)
|.+.+++.+|..+|.+|..+..... ..-+.+|...|.||.+.. +++|+.+|.+|+++.... .
T Consensus 278 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~------~ 351 (457)
T 1kt0_A 278 YFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN------E 351 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------H
T ss_pred HHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------H
Confidence 3344558899999999998875441 123567888888887765 999999999999986443 4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 393 EYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 393 ~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
+.+-..|.++...++|++|+..|+++.++.
T Consensus 352 ~a~~~~g~a~~~~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 352 KGLYRRGEAQLLMNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 567788999999999999999999987654
No 147
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.004 Score=50.45 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=36.1
Q ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 356 LEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 356 l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
+...|.++-. .++++|+++|.+|+++.... ...+...|.++...++|++|++.|+++.+..-
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQN------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 3333444433 34666777777776664332 34455666666666777777777777665543
No 148
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=95.93 E-value=0.066 Score=47.45 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=74.7
Q ss_pred hchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHHhh
Q psy11025 329 ADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARM-CVRVK 406 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel-~e~~~ 406 (535)
+++.+|...|.++......+. ..+...|.++... ++++|+.+|.+|+.+.... ...+...|.+ +...+
T Consensus 24 ~~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 24 QNPEAQLQALQDKIRANPQNS----EQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN------AELYAALATVLYYQAS 93 (177)
T ss_dssp ---CCCCHHHHHHHHHCCSCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC------HHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcC
Confidence 445556666666555432222 2455556666554 5999999999999987554 3466777887 77789
Q ss_pred hH--HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 407 EF--DKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 407 ~y--~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+| ++|+.+|++..+..-.. ..+.. .+.+.+..|+...|...|++...
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~~~-------la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITALML-------LASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHH-------HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHHHH-------HHHHHHHcccHHHHHHHHHHHHh
Confidence 98 99999999987654322 11222 22456667888889999988544
No 149
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.90 E-value=0.14 Score=53.86 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGED---------NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES- 425 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~eg---------r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~- 425 (535)
+..+..+++..++++|+.+|.+|+++..... ....-..++...|.++.+.++|++|++.|+++.++.-..
T Consensus 272 ~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 351 (457)
T 1kt0_A 272 KEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE 351 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH
Confidence 3444444455569999999999999876542 112335788889999999999999999999997764332
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 426 EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 426 e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
..+... ..+++..++...|...|++.-.
T Consensus 352 ~a~~~~-------g~a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 352 KGLYRR-------GEAQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHHHH-------HHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHH-------HHHHHHccCHHHHHHHHHHHHH
Confidence 122222 2456667888889999998544
No 150
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=95.89 E-value=0.068 Score=47.38 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=70.7
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH-HHhC-CH--HHHHHHHHHHHHHHhcCCcHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKS-LEEL-KS--DAALTLYSRAADVAHGEDNYKQAAEYI 395 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~-~ek~-~~--~eAie~y~kAaely~~egr~~~Aa~~l 395 (535)
.-+.+|...+++.+|..+|.+|....-.+. ..+...+.+ +... ++ ++|+.+|.+++.+.... ...+
T Consensus 49 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~ 118 (177)
T 2e2e_A 49 LLGEYYLWQNDYSNSLLAYRQALQLRGENA----ELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE------ITAL 118 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHCSCH----HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC------HHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc------HHHH
Confidence 456677777788889999998887764443 356666777 6443 46 99999999999985443 2456
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 396 SRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 396 ~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
...|.++...++|++|++.|++..+..
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 778899999999999999999986554
No 151
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.87 E-value=0.061 Score=59.82 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=61.5
Q ss_pred HHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-hhHHHHHH
Q psy11025 355 VLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE-SEHLLAIG 432 (535)
Q Consensus 355 ~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a-~e~~~~a~ 432 (535)
++..-+.++.. .++++|+++|++|+++--.. ...+...|.++...|+|++ ++.|+++.+..-. ...+...+
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg 541 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGE------LAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLA 541 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHH
Confidence 34444444444 45899999999999886554 3456678888899999999 9999998765422 12232322
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 433 RLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 433 rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
.+++..|+...|...|++
T Consensus 542 -------~~~~~~g~~~~A~~~~~~ 559 (681)
T 2pzi_A 542 -------RARSAEGDRVGAVRTLDE 559 (681)
T ss_dssp -------HHHHHTTCHHHHHHHHHT
T ss_pred -------HHHHHcCCHHHHHHHHHh
Confidence 445567888889999986
No 152
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.85 E-value=0.093 Score=48.83 Aligned_cols=129 Identities=16% Similarity=0.038 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CHHHHHH------------HHHHHHHHHHh-----CCHHHHHHH
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYKQAAEYISR-----NREAAST------------VLEKGAKSLEE-----LKSDAALTL 374 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~kAA~~y~~-----~~~~AA~------------~l~~AAk~~ek-----~~~~eAie~ 374 (535)
.+++|..+|++|+....+ .++...+.+|.. +...|.. ++...+.+|.. .++++|+.+
T Consensus 33 ~~~~A~~~~~~a~~~g~~-~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 111 (212)
T 3rjv_A 33 DYQKAEYWAQKAAAQGDG-DALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITL 111 (212)
T ss_dssp CHHHHHHHHHHHHHTTCH-HHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCH-HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHH
Confidence 667999999999863211 122222223221 1222333 34445566653 469999999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-hcC---
Q psy11025 375 YSRAADVAHGEDNYKQAAEYISRAARMCVR----VKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQL-ARG--- 446 (535)
Q Consensus 375 y~kAaely~~egr~~~Aa~~l~kaAel~e~----~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L-~~~--- 446 (535)
|++|++. |....-...+..++.++.. .+++++|+.+|+++.+...........+ .+++ ..+
T Consensus 112 ~~~A~~~----~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg-------~~y~~g~gg~~ 180 (212)
T 3rjv_A 112 LQDAARD----SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAG-------MMFQQGEKGFI 180 (212)
T ss_dssp HHHHTSS----TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHH-------HHHHHCBTTTB
T ss_pred HHHHHHc----CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHH-------HHHHcCCCCCC
Confidence 9999874 2211335567788999988 6799999999999976621122222222 2232 223
Q ss_pred --CHHHHHHHHHH
Q psy11025 447 --DTVAAEKAFKE 457 (535)
Q Consensus 447 --D~vaA~~~~e~ 457 (535)
|...|...|++
T Consensus 181 ~~d~~~A~~~~~~ 193 (212)
T 3rjv_A 181 EPNKQKALHWLNV 193 (212)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 78888888886
No 153
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.84 E-value=0.17 Score=40.65 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHH
Q psy11025 353 STVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAI 431 (535)
Q Consensus 353 A~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a 431 (535)
+.++...+.++... ++++|+++|.++....... ...+...|.++...++|++|+.+|++..+.......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~---- 78 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE---- 78 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH----
Confidence 45566666666554 5999999999999875433 346778888999999999999999998765432211
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 432 GRLAVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 432 ~rl~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
.......++...++...|...|++..
T Consensus 79 --~~~~la~~~~~~~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 79 --AWYNLGNAYYKQGDYDEAIEYYQKAL 104 (125)
T ss_dssp --HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 11112244556788888988888743
No 154
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=95.82 E-value=0.014 Score=60.09 Aligned_cols=187 Identities=13% Similarity=0.037 Sum_probs=91.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHh-------------CCHHHHHHHHHHHHHHHh
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNRE---AASTVLEKGAKSLEE-------------LKSDAALTLYSRAADVAH 383 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~---~AA~~l~~AAk~~ek-------------~~~~eAie~y~kAaely~ 383 (535)
..+.+|.+.+++.+|...|.+|...+-++.. .-|.+|......... ...++|+.+|++|.++..
T Consensus 252 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 331 (472)
T 4g1t_A 252 SAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEAND 331 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCC
Confidence 4556666666677888888887766543322 122333222211110 114567777777776644
Q ss_pred cCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccC
Q psy11025 384 GEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCE 463 (535)
Q Consensus 384 ~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~ 463 (535)
... ..+...|.++...++|++|++.|+++.+........... ...++ .++....++...|+..|++.-....
T Consensus 332 ~~~------~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~Ai~~y~kal~i~~ 403 (472)
T 4g1t_A 332 NLF------RVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLL-HLRYG-NFQLYQMKCEDKAIHHFIEGVKINQ 403 (472)
T ss_dssp TTC------CCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHH-HHHHH-HHHHHTSSCHHHHHHHHHHHHHSCC
T ss_pred chh------hhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHH-HHHHH-HHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 332 245567889999999999999999986543211111111 11111 1223356777779888887433211
Q ss_pred CCCccccccccccccccccch-hhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 464 APERCESGSSSFSFSLGKAGY-HQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 464 ~~~f~~sre~~~l~~L~l~ay-~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+ ... + ...+.. +..+ ...+..-+.....+...|.|+...||.-.|...+++
T Consensus 404 ~--~~~-~-~~~~~~--l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~k 455 (472)
T 4g1t_A 404 K--SRE-K-EKMKDK--LQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSER 455 (472)
T ss_dssp C--CHH-H-HHHHHH--HHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC--------
T ss_pred c--cHH-H-HHHHHH--HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1 100 0 000011 0010 011111111122335678899999999999888887
No 155
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.81 E-value=0.075 Score=44.71 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=60.1
Q ss_pred HhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Q psy11025 364 EELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQ 442 (535)
Q Consensus 364 ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~ 442 (535)
...++++|+++|++++++... ......++...|.++...++|++|++.|++..+..-.. ..+... ..+.
T Consensus 40 ~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~-------a~~~ 109 (148)
T 2dba_A 40 KCGDYGGALAAYTQALGLDAT---PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR-------SQAL 109 (148)
T ss_dssp TTTCHHHHHHHHHHHHTSCCC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH-------HHHH
T ss_pred HhCCHHHHHHHHHHHHHHccc---chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH-------HHHH
Confidence 344588888888888775432 23346778888999999999999999999987664322 112222 2445
Q ss_pred HhcCCHHHHHHHHHHhhh
Q psy11025 443 LARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 443 L~~~D~vaA~~~~e~~~~ 460 (535)
...++...|...|++.-.
T Consensus 110 ~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 556788789999987433
No 156
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.77 E-value=0.068 Score=59.42 Aligned_cols=87 Identities=10% Similarity=0.006 Sum_probs=62.1
Q ss_pred hchHHHHHHHHHHHH-HH----HhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q psy11025 329 ADVAHGEDNYKQAAE-YI----SRNREAASTVLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMC 402 (535)
Q Consensus 329 A~~~eAa~af~kAA~-~y----~~~~~~AA~~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~ 402 (535)
+++.+|.++|.+|.. ++ ...+..+ ..+...|.++. ..++++|+++|.+|+++.-.. ...+...|.++
T Consensus 405 ~~~~~A~~~~~~al~~~~~~~~~~~p~~~-~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~lg~~~ 477 (681)
T 2pzi_A 405 SQPVQTLDSLRAARHGALDADGVDFSESV-ELPLMEVRALLDLGDVAKATRKLDDLAERVGWR------WRLVWYRAVAE 477 (681)
T ss_dssp CCHHHHHHHHHHHHTC-------CCTTCS-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC------HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhhhcccccccccccch-hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch------HHHHHHHHHHH
Confidence 447889999998861 11 1123322 23444455554 456999999999999986554 35677788889
Q ss_pred HHhhhHHHHHHHHHHHHHHH
Q psy11025 403 VRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 403 e~~~~y~~Aie~ye~~~~~~ 422 (535)
...++|++|++.|+++.++.
T Consensus 478 ~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 478 LLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp HHHTCHHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999987664
No 157
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.77 E-value=0.063 Score=44.18 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=64.9
Q ss_pred HHHHHHHHHHH-hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHH
Q psy11025 354 TVLEKGAKSLE-ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAI 431 (535)
Q Consensus 354 ~~l~~AAk~~e-k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a 431 (535)
..+...|.++. ..++++|+.+|.+++++.... ..++...|.++...++|++|+++|+++.+..-.. ..+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~- 89 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD------AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTR- 89 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHH-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHH-
Confidence 34444455554 446899999999998875433 4678888999999999999999999987764321 12222
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 432 GRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 432 ~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
...+.+..++...|...|++.
T Consensus 90 ------la~~~~~~~~~~~A~~~~~~~ 110 (133)
T 2lni_A 90 ------KAAALEAMKDYTKAMDVYQKA 110 (133)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHHH
T ss_pred ------HHHHHHHHhhHHHHHHHHHHH
Confidence 224556678888899999873
No 158
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.76 E-value=0.4 Score=47.05 Aligned_cols=27 Identities=7% Similarity=0.223 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy11025 395 ISRAARMCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 395 l~kaAel~e~~~~y~~Aie~ye~~~~~ 421 (535)
+...+.++.+.|++++|++.|++..+.
T Consensus 133 ~~~l~~~~~~~g~~~~A~~~l~~~~~~ 159 (291)
T 3mkr_A 133 MAMTVQILLKLDRLDLARKELKKMQDQ 159 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 334566666677777777777776554
No 159
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.67 E-value=0.011 Score=62.95 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=73.7
Q ss_pred HHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q psy11025 325 YSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCV 403 (535)
Q Consensus 325 YekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e 403 (535)
|.+.+++.+|..+|.+|....-.. +.++...|.+|.+. ++++|+++|++|+++.... ...+...|.++.
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~------~~~~~~lg~~~~ 85 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPSN----AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY------IKGYYRRAASNM 85 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC------HHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Confidence 344566778888888887664333 34566667777665 5999999999999984332 456778899999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 404 RVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 404 ~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
..++|++|++.|+++.+..-.. ......+ .+...+..++...|...+++
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~-----~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQ-----ECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHH-----HHHHHHHHHHHCCC------
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHH-----HHHHHHHHHHHHHHhccccc
Confidence 9999999999999987764322 2222222 12113333444448788873
No 160
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.66 E-value=0.057 Score=42.88 Aligned_cols=91 Identities=14% Similarity=0.081 Sum_probs=64.6
Q ss_pred HHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH---hhHHHHHH
Q psy11025 357 EKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE---SEHLLAIG 432 (535)
Q Consensus 357 ~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a---~e~~~~a~ 432 (535)
...+.++.. .++++|+.+|.+|+++.... ...+...|.++...++|++|++.|++..+..-. ...+..
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-- 81 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPEE------SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA-- 81 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH--
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH--
Confidence 344555554 45999999999999986543 345678888999999999999999998765432 111222
Q ss_pred HHHHHHHHHHHhc-CCHHHHHHHHHHhhh
Q psy11025 433 RLAVALVLVQLAR-GDTVAAEKAFKEWGN 460 (535)
Q Consensus 433 rl~la~il~~L~~-~D~vaA~~~~e~~~~ 460 (535)
...+.+.. ++...|...|++...
T Consensus 82 -----l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 82 -----KADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp -----HHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred -----HHHHHHHHhCCHHHHHHHHHHHhh
Confidence 23556677 787779999987544
No 161
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=95.63 E-value=0.3 Score=50.53 Aligned_cols=123 Identities=9% Similarity=0.023 Sum_probs=82.3
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-C-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-K-SDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~-~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.+.+|.+.+++.+|..+|.+|.... |.. +.++..-+.++... . +++|+.+|.+|+.+.-.. ...+...
T Consensus 103 lg~~~~~~g~~~~Al~~~~~al~l~---P~~-~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~------~~a~~~~ 172 (382)
T 2h6f_A 103 FRAVLQRDERSERAFKLTRDAIELN---AAN-YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN------YQVWHHR 172 (382)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC------HHHHHHH
T ss_pred HHHHHHHCCChHHHHHHHHHHHHhC---ccC-HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC------HHHHHHH
Confidence 3444555556888999998887653 332 22455556666654 3 999999999999986544 3466777
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+.++...++|++|++.|+++.++--.. ..+...+ .++..+..++. |...|++...
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg-----~~~~~~g~~~e--Al~~~~~al~ 228 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ-----WVIQEFKLWDN--ELQYVDQLLK 228 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH-----HHHHHHTCCTT--HHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH-----HHHHHcCChHH--HHHHHHHHHH
Confidence 888888999999999999987654321 2233333 23556666665 8888887433
No 162
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.34 E-value=0.064 Score=52.45 Aligned_cols=94 Identities=10% Similarity=0.050 Sum_probs=72.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|...|.+|....-.+ +..|..-|.++... ++++|+.+|.+|+++.... ...+...
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l 78 (281)
T 2c2l_A 9 EQGNRLFVGRKYPEAAACYGRAITRNPLV----AVYYTNRALCYLKMQQPEQALADCRRALELDGQS------VKAHFFL 78 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC------HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------HHHHHHH
Confidence 34566777788999999999998764333 23566667777765 4999999999999874433 3567788
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 399 ARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 399 Ael~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
|.++...|+|++|+..|+++.++.-
T Consensus 79 g~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 79 GQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 9999999999999999999876653
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.1 Score=41.84 Aligned_cols=92 Identities=9% Similarity=-0.028 Sum_probs=66.2
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
-+..|.+.+++.+|..+|.+|.... +.. ...+...+.++...+ +++|+++|.+|+++....+....-..++...+
T Consensus 10 ~g~~~~~~~~~~~A~~~~~~al~~~---p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 85 (111)
T 2l6j_A 10 QGNSLFKQGLYREAVHCYDQLITAQ---PQN-PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLE 85 (111)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcC---CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 4555666677888888888887653 333 566777777777654 89999999999988776655666677777777
Q ss_pred HHHHHhhhHHHHHHHHH
Q psy11025 400 RMCVRVKEFDKAADLIR 416 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye 416 (535)
.++...++++.|++.|+
T Consensus 86 ~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 86 LAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHhHhhhHhHHH
Confidence 77777777766665544
No 164
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.25 E-value=0.14 Score=43.24 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=63.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHH
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRL 434 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl 434 (535)
+..+..++...++++|+.+|++|+.+.-.. ...+...|.++...|++++|+..|+++.++.-.. +.+..
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~---- 90 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQKEPER------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAA---- 90 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH----
Confidence 444455555667999999999999986554 3466778889999999999999999987664321 12222
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhh
Q psy11025 435 AVALVLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 435 ~la~il~~L~~~D~vaA~~~~e~~~ 459 (535)
+ ..++...|+...|...|++..
T Consensus 91 -l--a~~~~~~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 91 -L--AVSHTNEHNANAALASLRAWL 112 (121)
T ss_dssp -H--HHHHHHHHHHHHHHHHHHHHH
T ss_pred -H--HHHHHHcCCHHHHHHHHHHHH
Confidence 2 234445566666888888743
No 165
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.22 E-value=0.18 Score=53.44 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy11025 355 VLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGR 433 (535)
Q Consensus 355 ~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~r 433 (535)
.+...+.+++.. ++++|..+|++|+++.... + ...+...+.++.+.|++++|.++|+++.+..... ..
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~--~---~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~------~~ 391 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDID--P---TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR------HH 391 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC--H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC------TH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCccccC--c---hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc------hH
Confidence 444455566554 4899999999999863221 2 2467778888888899999999999986532110 01
Q ss_pred HHHHH-HHHHHhcCCHHHHHHHHHHhh
Q psy11025 434 LAVAL-VLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 434 l~la~-il~~L~~~D~vaA~~~~e~~~ 459 (535)
..++. .++....|+...|..+|++.-
T Consensus 392 ~~~~~a~~~~~~~~~~~~A~~~~e~al 418 (530)
T 2ooe_A 392 VYVTAALMEYYCSKDKSVAFKIFELGL 418 (530)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHH
Confidence 11111 122334788888989988743
No 166
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=95.18 E-value=0.15 Score=52.42 Aligned_cols=92 Identities=10% Similarity=0.065 Sum_probs=62.3
Q ss_pred HHHhCCHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHH
Q psy11025 362 SLEELKSDAALTLYSRAADVAHGE----------DNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLA 430 (535)
Q Consensus 362 ~~ek~~~~eAie~y~kAaely~~e----------gr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~ 430 (535)
+++..++++|+.+|++|++++... .....-..++...|.++...++|++|++.|+++.+..-.. ..+..
T Consensus 233 ~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 312 (370)
T 1ihg_A 233 FFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYR 312 (370)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 334445778888888888765432 0234456788899999999999999999999987654221 11222
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 431 IGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 431 a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
...+++..++...|...|++...
T Consensus 313 -------lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 313 -------RAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp -------HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHccCHHHHHHHHHHHHH
Confidence 22455667788889999987433
No 167
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.13 E-value=0.3 Score=45.00 Aligned_cols=100 Identities=15% Similarity=0.220 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 354 TVLEKGAKSLEELKSDAALTLYSRAADVAHGE----------DNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 354 ~~l~~AAk~~ek~~~~eAie~y~kAaely~~e----------gr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
..+.++...+...++++|+.+|.+|+.+.-.. .....+.......|.++...|+|++|+..|+++.+..-
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 85 (208)
T 3urz_A 6 EMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAP 85 (208)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Confidence 44566666667777888888888888763221 11112223334488999999999999999999876653
Q ss_pred Hh-hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 424 ES-EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 424 a~-e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.. +.+...+ .+.+..|+...|...|++.-.
T Consensus 86 ~~~~~~~~lg-------~~~~~~g~~~~A~~~~~~al~ 116 (208)
T 3urz_A 86 NNVDCLEACA-------EMQVCRGQEKDALRMYEKILQ 116 (208)
T ss_dssp TCHHHHHHHH-------HHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHH-------HHHHHcCCHHHHHHHHHHHHH
Confidence 22 2233333 445567888889999998544
No 168
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.08 E-value=0.17 Score=49.49 Aligned_cols=29 Identities=14% Similarity=0.127 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 394 YISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 394 ~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
.+...|.++...|++++|++.|++..+..
T Consensus 221 ~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 221 LATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 34455666667788888888888776553
No 169
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=95.08 E-value=0.19 Score=53.10 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHHHhcC-C-cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHH
Q psy11025 366 LKSDAALTLYSRAADVAHGE-D-NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLLAIGRLAVALVLV 441 (535)
Q Consensus 366 ~~~~eAie~y~kAaely~~e-g-r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~~a~rl~la~il~ 441 (535)
.++++|+.+|++|.++.... | ..-.-+..+..+|.+|...|+|++|+.+|+++...+... ......+..+.-+..+
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~ 391 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRL 391 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 35899999999999996543 2 223566888999999999999999999999998887652 1111222222223355
Q ss_pred HHhcCCHHHHHHHHHH
Q psy11025 442 QLARGDTVAAEKAFKE 457 (535)
Q Consensus 442 ~L~~~D~vaA~~~~e~ 457 (535)
+..+|+...|...|++
T Consensus 392 ~~~qg~~~eA~~~~~~ 407 (433)
T 3qww_A 392 YMGLENKAAGEKALKK 407 (433)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHH
Confidence 6677888889888886
No 170
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.90 E-value=0.2 Score=41.01 Aligned_cols=82 Identities=12% Similarity=-0.046 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHH
Q psy11025 333 HGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKA 411 (535)
Q Consensus 333 eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~A 411 (535)
+|...|.++.... +.. +..+...|.++... ++++|+.+|++|+.+.... ...+...|.++...|++++|
T Consensus 3 ~a~~~~~~al~~~---p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 3 AITERLEAMLAQG---TDN-MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY------SVAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CHHHHHHHHHTTT---CCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhC---CCc-HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHcCCHHHH
Confidence 3455566654432 222 23455666666654 5999999999999985443 34667889999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy11025 412 ADLIRQEIGYHQE 424 (535)
Q Consensus 412 ie~ye~~~~~~~a 424 (535)
+..|+++.+....
T Consensus 73 ~~~~~~al~~~~~ 85 (115)
T 2kat_A 73 RQAWESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc
Confidence 9999998776543
No 171
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.72 E-value=0.11 Score=46.34 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHhcCC
Q psy11025 371 ALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE---SEHLLAIGRLAVALVLVQLARGD 447 (535)
Q Consensus 371 Aie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a---~e~~~~a~rl~la~il~~L~~~D 447 (535)
|+.+|++|+++.-.. ...+...|.++...|+|++|+..|++..+..-. ....... +.++..+...|
T Consensus 93 a~~~~~~al~~~P~~------~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l-----~~~~~~~g~~~ 161 (176)
T 2r5s_A 93 ELKRLEQELAANPDN------FELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTF-----MDILSALGQGN 161 (176)
T ss_dssp HHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHH-----HHHHHHHCSSC
T ss_pred HHHHHHHHHHhCCCC------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHH-----HHHHHHhCCCC
Confidence 455555555543322 244556677777889999999999887654321 1122222 22344554445
Q ss_pred HHHHHHHHHH
Q psy11025 448 TVAAEKAFKE 457 (535)
Q Consensus 448 ~vaA~~~~e~ 457 (535)
. |...|++
T Consensus 162 ~--A~~~y~~ 169 (176)
T 2r5s_A 162 A--IASKYRR 169 (176)
T ss_dssp H--HHHHHHH
T ss_pred c--HHHHHHH
Confidence 4 7778775
No 172
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=94.69 E-value=0.11 Score=51.93 Aligned_cols=132 Identities=11% Similarity=-0.012 Sum_probs=86.4
Q ss_pred CCHH----HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHH
Q psy11025 316 LKPD----AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQA 391 (535)
Q Consensus 316 ~K~D----~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~A 391 (535)
+.++ .-|.+|...+.+.+|..+|..+.. ..+... -.|..+.-+++...+++|+.+|.++..+- .+...
T Consensus 99 ~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~---~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~----d~~~~ 170 (282)
T 4f3v_A 99 TSPLAITMGFAACEAAQGNYADAMEALEAAPV---AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWP----DKFLA 170 (282)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC---TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS----CHHHH
T ss_pred CCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh---cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccC----CcccH
Confidence 4556 455667777778888877766543 235545 66888888888888999999998664321 23344
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 392 AEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 392 a~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
+...-..+.+++..|++++|+..|+++...-.. -....-+.+..+ +|....|+...|..+|++.
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~-P~~~~da~~~~g--laL~~lGr~deA~~~l~~a 234 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEANDSPAG-EACARAIAWYLA--MARRSQGNESAAVALLEWL 234 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT-TTTHHHHHHHHH--HHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC-ccccHHHHHHHH--HHHHHcCCHHHHHHHHHHH
Confidence 556667788899999999999999998631110 000111222232 4444557777799999874
No 173
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=94.66 E-value=0.23 Score=51.43 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=62.9
Q ss_pred HHHHHHHhc-hHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 322 LTLYSRAAD-VAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 322 A~lYekAA~-~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
+.+|.+.+. +.+|..+|.+|....-++. .++..-+.++... ++++|+.+|.+|+++--.. ..++...+
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P~~~----~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~------~~a~~~lg 207 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQPKNY----QVWHHRRVLVEWLRDPSQELEFIADILNQDAKN------YHAWQHRQ 207 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC------HHHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC------HHHHHHHH
Confidence 344444554 6666666666665433332 2455556666654 4899999999999875443 34566778
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~ 422 (535)
.++...|+|++|++.|+++.++.
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~ 230 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKED 230 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHC
T ss_pred HHHHHcCChHHHHHHHHHHHHhC
Confidence 88888999999999999987664
No 174
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.61 E-value=0.22 Score=52.45 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC-C-cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh--hHHH
Q psy11025 354 TVLEKGAKSLEELKSDAALTLYSRAADVAHGE-D-NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES--EHLL 429 (535)
Q Consensus 354 ~~l~~AAk~~ek~~~~eAie~y~kAaely~~e-g-r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~--e~~~ 429 (535)
..+....++..+..+++|+++|+++.+++... | ..-.-+..+..+|.+|...|+|++|+.+|+++...+... ....
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 44555556666667999999999999885432 2 223567889999999999999999999999998887652 1122
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 430 AIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 430 ~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
..+..+.-+..++...|+...|...|++
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 2222222233556677888889888887
No 175
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=94.40 E-value=1 Score=47.12 Aligned_cols=75 Identities=7% Similarity=-0.003 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy11025 366 LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVK-----EFDKAADLIRQEIGYHQESEHLLAIGRLAVALVL 440 (535)
Q Consensus 366 ~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~-----~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il 440 (535)
.++++|+.+|++|++. |. ...+..+|.+|.. | ++++|+++|++++ ..........+ .
T Consensus 265 ~d~~~A~~~~~~Aa~~----g~----~~A~~~Lg~~y~~-G~g~~~d~~~A~~~~~~Aa--~g~~~A~~~Lg-------~ 326 (452)
T 3e4b_A 265 GDVEQMMKYLDNGRAA----DQ----PRAELLLGKLYYE-GKWVPADAKAAEAHFEKAV--GREVAADYYLG-------Q 326 (452)
T ss_dssp CCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHH-CSSSCCCHHHHHHHHHTTT--TTCHHHHHHHH-------H
T ss_pred CCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHc-CCCCCCCHHHHHHHHHHHh--CCCHHHHHHHH-------H
Confidence 3466666666666642 11 2234455556663 4 8888999888887 11122222222 2
Q ss_pred HHHh----cCCHHHHHHHHHHh
Q psy11025 441 VQLA----RGDTVAAEKAFKEW 458 (535)
Q Consensus 441 ~~L~----~~D~vaA~~~~e~~ 458 (535)
+++. ..|...|...|++-
T Consensus 327 ~y~~G~g~~~d~~~A~~~~~~A 348 (452)
T 3e4b_A 327 IYRRGYLGKVYPQKALDHLLTA 348 (452)
T ss_dssp HHHTTTTSSCCHHHHHHHHHHH
T ss_pred HHHCCCCCCcCHHHHHHHHHHH
Confidence 2222 22777787777763
No 176
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.40 E-value=0.23 Score=43.14 Aligned_cols=84 Identities=17% Similarity=0.191 Sum_probs=57.9
Q ss_pred HHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy11025 359 GAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVR----VKEFDKAADLIRQEIGYHQESEHLLAIGR 433 (535)
Q Consensus 359 AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~----~~~y~~Aie~ye~~~~~~~a~e~~~~a~r 433 (535)
.+.+|... +.++|+++|++|++. |. ...+-.++.+|.. .+++++|+++|+++++.-.. ......+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~-~a~~~Lg- 100 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL----NS----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQ-DGCLILG- 100 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH-HHHHHHH-
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC----CC----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCH-HHHHHHH-
Confidence 56666654 467799999999986 22 3456678888887 68999999999999765221 1122222
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHHHh
Q psy11025 434 LAVALVLVQLA----RGDTVAAEKAFKEW 458 (535)
Q Consensus 434 l~la~il~~L~----~~D~vaA~~~~e~~ 458 (535)
.++.. ..|...|...|++-
T Consensus 101 ------~~y~~G~g~~~d~~~A~~~~~~A 123 (138)
T 1klx_A 101 ------YKQYAGKGVVKNEKQAVKTFEKA 123 (138)
T ss_dssp ------HHHHHTSSSCCCHHHHHHHHHHH
T ss_pred ------HHHHCCCCCCcCHHHHHHHHHHH
Confidence 33444 67888888888863
No 177
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.32 E-value=0.41 Score=50.65 Aligned_cols=126 Identities=10% Similarity=-0.011 Sum_probs=75.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+.++++.+++.+|...|.+|..+. +...+..+...+.++... +.++|.++|.+|.+..... ...+...
T Consensus 326 ~~~~~~~~~g~~~~A~~~~~~al~~~---p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~------~~~~~~~ 396 (530)
T 2ooe_A 326 AYADYEESRMKYEKVHSIYNRLLAIE---DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR------HHVYVTA 396 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSS---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC------THHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHhCcc---ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc------hHHHHHH
Confidence 34555555566667777777766532 222234566666666544 4788999999888753221 1222233
Q ss_pred HHH-HHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 399 ARM-CVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 399 Ael-~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
|.+ +...|++++|..+|++..+.+-... .+++..+-+....|+...|..+|++.-.
T Consensus 397 a~~~~~~~~~~~~A~~~~e~al~~~p~~~------~~~~~~~~~~~~~g~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 397 ALMEYYCSKDKSVAFKIFELGLKKYGDIP------EYVLAYIDYLSHLNEDNNTRVLFERVLT 453 (530)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHCCCCH------HHHHHHHHHHHhCCCHhhHHHHHHHHHh
Confidence 333 2346899999999999987664321 1122222334567888889999998443
No 178
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.23 E-value=0.41 Score=38.68 Aligned_cols=64 Identities=17% Similarity=0.118 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 355 VLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 355 ~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
.+...|.++... ++++|+.+|++|+++.-... ..+...|.++...++|++|++.|+++.++...
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYV------GTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 344555566554 58999999999998865542 26677888888899999999999988766443
No 179
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=94.10 E-value=0.084 Score=53.25 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHHhCH--------HHH-----HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q psy11025 331 VAHGEDNYKQAAEYISRNR--------EAA-----STVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYIS 396 (535)
Q Consensus 331 ~~eAa~af~kAA~~y~~~~--------~~A-----A~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~ 396 (535)
+.+|..+|.+|..+..... ..+ ..+|...|.+|.+.+ +++|+.+|.+|+++.... .+.+.
T Consensus 195 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~ 268 (338)
T 2if4_A 195 LEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN------PKALF 268 (338)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC------HHHHH
T ss_pred HHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Confidence 6777777777776532211 011 136677777777654 899999999999875432 45677
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
..|.++...++|++|++.|+++.++.
T Consensus 269 ~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 269 RRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 88888988999999999999886554
No 180
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.04 E-value=0.33 Score=39.31 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=50.5
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQ 390 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~ 390 (535)
.-+.+|.+.+++.+|..+|.+|....-.... ++...|.+|...+ +++|+++|++|+++....+....
T Consensus 12 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 12 ALAQEHLKHDNASRALALFEELVETDPDYVG----TYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 4567788888899999999999876543333 5667788887764 99999999999998766655443
No 181
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=93.97 E-value=0.23 Score=50.06 Aligned_cols=85 Identities=16% Similarity=0.172 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHHHh------cCCcHHHHH-----HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHH
Q psy11025 367 KSDAALTLYSRAADVAH------GEDNYKQAA-----EYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRL 434 (535)
Q Consensus 367 ~~~eAie~y~kAaely~------~egr~~~Aa-----~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl 434 (535)
++++|+.+|.+|+.+.. ..|+...+. .++...|.++...++|++|++.|+++.+..-.. ..+...
T Consensus 194 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l--- 270 (338)
T 2if4_A 194 KLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRR--- 270 (338)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH---
Confidence 35556666666555422 222222222 377888989999999999999999987654321 222222
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 435 AVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 435 ~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
..+++..++...|...|++.
T Consensus 271 ----g~a~~~~g~~~~A~~~l~~a 290 (338)
T 2if4_A 271 ----GKAKAELGQMDSARDDFRKA 290 (338)
T ss_dssp ----HHHHHTTTCHHHHHHHHHHT
T ss_pred ----HHHHHHcCCHHHHHHHHHHH
Confidence 35566778888899999874
No 182
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.91 E-value=0.35 Score=37.08 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 353 STVLEKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 353 A~~l~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
+..+...+.++.. .++++|+.+|.+|+++.... ...+...|.++...++|++|++.|+++.+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3444555555544 45999999999999875433 3467788889999999999999999887653
No 183
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=93.86 E-value=0.4 Score=42.63 Aligned_cols=120 Identities=11% Similarity=0.037 Sum_probs=64.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYKQAAEYISRA 398 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~~Aa~~l~ka 398 (535)
.-+..|.+.+++.+|...|.+|.... |+. +.++..-+.++... ++++|+.+|+++..... . + ..... .
T Consensus 11 ~~a~~~~~~g~~~~A~~~~~~al~~~---P~~-~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~--~-~~~~~---~ 79 (176)
T 2r5s_A 11 KQVSELLQQGEHAQALNVIQTLSDEL---QSR-GDVKLAKADCLLETKQFELAQELLATIPLEYQ-D--N-SYKSL---I 79 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCHHH---HTS-HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-C--H-HHHHH---H
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHC---CCc-HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-C--h-HHHHH---H
Confidence 45566666677777777777765433 332 55666666666654 48888888887765543 2 1 11111 1
Q ss_pred HHHH-HHhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 399 ARMC-VRVKEFDKAADLIRQEIGYHQE-SEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 399 Ael~-e~~~~y~~Aie~ye~~~~~~~a-~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
+.+. .......+|++.|++..+..-. ....... ..+.+..|+...|...|++
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~l-------a~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 80 AKLELHQQAAESPELKRLEQELAANPDNFELACEL-------AVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHH-------HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHH-------HHHHHHcccHHHHHHHHHH
Confidence 2221 1112333467777666544322 1122222 2344556777777777765
No 184
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=93.60 E-value=0.6 Score=42.62 Aligned_cols=53 Identities=15% Similarity=0.216 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHHhh
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRV-----------KEFDKAADLIRQEIGYHQESE 426 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~-----------~~y~~Aie~ye~~~~~~~a~e 426 (535)
+++|+.+|++|+++--.. .+.+-..+..|... ++|++|++.|+++.++--...
T Consensus 62 ~~eAi~~le~AL~ldP~~------~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKK------DEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCcCc------HHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 568888888888874432 12233334444332 589999999988876644333
No 185
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.54 E-value=0.94 Score=44.04 Aligned_cols=53 Identities=13% Similarity=0.032 Sum_probs=22.7
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHH
Q psy11025 324 LYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAAD 380 (535)
Q Consensus 324 lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAae 380 (535)
.+.+.+++.+|...|.+|....-++. .++...|.++... ++++|+.+|+++..
T Consensus 126 ~~~~~g~~~~A~~~~~~al~~~P~~~----~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 126 QLMQESNYTDALPLLXDAWQLSNQNG----EIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTTSCH----HHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcch----hHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 33333445555555555443322221 1233334444333 25555555555543
No 186
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.39 E-value=0.34 Score=39.97 Aligned_cols=71 Identities=13% Similarity=0.062 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDN-YKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr-~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
|-.||.-+-.+|...++..|+..|++|.+.+..+.. ...-.+++...|..+-+.|++++|+.+|+++.++-
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 445777777777888899999999999999865421 12234788889999999999999999999986543
No 187
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.15 E-value=0.65 Score=45.14 Aligned_cols=92 Identities=18% Similarity=0.113 Sum_probs=64.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHH
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRL 434 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl 434 (535)
+..+-..+...++++|+.+|.+|+.+.... ...+...|.++...++|++|++.|+++.+..-.. ..+..
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~---- 77 (281)
T 2c2l_A 8 KEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF---- 77 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHH----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHH----
Confidence 334444445556999999999999985543 4577788999999999999999999987653221 11222
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 435 AVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 435 ~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
.+.+++..|+...|...|++.-.
T Consensus 78 ---lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 78 ---LGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHcCCHHHHHHHHHHHHH
Confidence 22445566788779888887433
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=93.04 E-value=0.45 Score=37.51 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYH 422 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~ 422 (535)
|..|-..+...++++|+++|++|+++.... +...+...|.++...++|++|++.|+++.+..
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG-----KDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST-----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 344444555566888888888888875433 11266777888888889999999988886554
No 189
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.88 E-value=0.24 Score=52.16 Aligned_cols=107 Identities=7% Similarity=0.066 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccc
Q psy11025 393 EYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGS 472 (535)
Q Consensus 393 ~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre 472 (535)
+.+.+.|+++.+.|+|++|+++|.+.-+.....+..... ++..+-+.+..+|...+...+.+...
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~---~l~~irl~l~~~d~~~~~~~~~ka~~------------ 196 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDV---MLTIARLGFFYNDQLYVKEKLEAVNS------------ 196 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHH---HHHHHHHHHHHTCHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHH---HHHHHHHHHHhccHHHHHHHHHHHHH------------
Confidence 355566677777777777777776665554333222111 12222334455666666655554211
Q ss_pred ccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH-hcCCC
Q psy11025 473 SSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE-WGNCC 525 (535)
Q Consensus 473 ~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~-~~~F~ 525 (535)
......++...+++-...|+.+|+.+|+-.|-+.|-+ +++|.
T Consensus 197 -----------~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 197 -----------MIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp -----------HHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred -----------hhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 1112223344445555566777777777776666655 34443
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.75 E-value=1.1 Score=49.37 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHH------HhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Q psy11025 355 VLEKGAKSLEEL-KSDAALTLYSRAADV------AHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEH 427 (535)
Q Consensus 355 ~l~~AAk~~ek~-~~~eAie~y~kAael------y~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~ 427 (535)
...++|+++.+. +.+.|..||.++-++ |...|.. +.+.+++++.+..+++..|..+|.+.++.-.+.+.
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~----~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~ 758 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNK----EGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDL 758 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCH----HHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHH
Confidence 456667666654 588888888875332 4444433 34667888888888999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 428 LLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 428 ~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
+...+++-.|+.+++-..-.......++++|+.
T Consensus 759 ~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~ 791 (814)
T 3mkq_A 759 LIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKE 791 (814)
T ss_dssp HHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 888888877777777654344112355555554
No 191
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.67 E-value=0.31 Score=44.54 Aligned_cols=106 Identities=9% Similarity=0.118 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhch-HHHHHHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHhc----
Q psy11025 318 PDAALTLYSRAADV-AHGEDNYKQAAEYISR-----NREAASTVLEKGAKSLEE---LKSDAALTLYSRAADVAHG---- 384 (535)
Q Consensus 318 ~D~AA~lYekAA~~-~eAa~af~kAA~~y~~-----~~~~AA~~l~~AAk~~ek---~~~~eAie~y~kAaely~~---- 384 (535)
+|+|..+|++|-.. .+-+++|..-+.++.. ....|-..+.+|..+|++ .+|+.+-.+|..+.-++..
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~ 97 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLT 97 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccC
Confidence 35788888877541 1222333333334432 223344445566666654 2444444444444444332
Q ss_pred ------CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 385 ------EDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 385 ------egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.|++..|.+|++++.++--....|.+|+++.+++.+++.
T Consensus 98 P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el~~ 142 (158)
T 1zu2_A 98 PDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHA 142 (158)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHH
T ss_pred cchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhccC
Confidence 256778888888888777667788888888888776654
No 192
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=92.67 E-value=0.39 Score=37.94 Aligned_cols=62 Identities=10% Similarity=0.090 Sum_probs=46.5
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC
Q psy11025 321 ALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE 385 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e 385 (535)
-+..|.+.+++.+|...|.++....-.+ +...+...|.++... ++++|+++|++|+++.-..
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTEPVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 4567778889999999999988764322 222566667777665 5999999999999986555
No 193
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=92.35 E-value=0.73 Score=37.54 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=43.8
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCc
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDN 387 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr 387 (535)
.-+.+|.+.+++.+|..+|.+|..+.-.. +.++...|.++... ++++|+.+|++|+++....+.
T Consensus 24 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 24 TLGKTYAEHEQFDAALPHLRAALDFDPTY----SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 45667777777888888888887654333 22455566666654 488888888888888765544
No 194
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=91.72 E-value=1 Score=47.93 Aligned_cols=88 Identities=9% Similarity=0.137 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHH--
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEY-- 394 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~-- 394 (535)
++++|..+|.++.+|.+=++| +.+.++ |..|..++++.+ .+..+..++..+...|.++.|-.|
T Consensus 137 ~yeeA~~~Y~~a~n~~~LA~~-------L~~Lg~-----yq~AVea~~KA~---~~~~Wk~v~~aCv~~~ef~lA~~~~l 201 (449)
T 1b89_A 137 MYDAAKLLYNNVSNFGRLAST-------LVHLGE-----YQAAVDGARKAN---STRTWKEVCFACVDGKEFRLAQMCGL 201 (449)
T ss_dssp CTTTHHHHHHHTTCHHHHHHH-------HHTTTC-----HHHHHHHHHHHT---CHHHHHHHHHHHHHTTCHHHHHHTTT
T ss_pred CHHHHHHHHHHhhhHHHHHHH-------HHHhcc-----HHHHHHHHHHcC---CchhHHHHHHHHHHcCcHHHHHHHHH
Confidence 446777777777554443333 332222 222222222221 123334444444444545555432
Q ss_pred --------HHHHHHHHHHhhhHHHHHHHHHHHH
Q psy11025 395 --------ISRAARMCVRVKEFDKAADLIRQEI 419 (535)
Q Consensus 395 --------l~kaAel~e~~~~y~~Aie~ye~~~ 419 (535)
+..++.+|++.|.+++|+.+|+...
T Consensus 202 ~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL 234 (449)
T 1b89_A 202 HIVVHADELEELINYYQDRGYFEELITMLEAAL 234 (449)
T ss_dssp TTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 3456778888999999999998874
No 195
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=91.56 E-value=0.8 Score=37.68 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHhch----HHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHH
Q psy11025 317 KPDAALTLYSRAADV----AHGEDNYKQAAEYISRN--REAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQ 390 (535)
Q Consensus 317 K~D~AA~lYekAA~~----~eAa~af~kAA~~y~~~--~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~ 390 (535)
++++|..+|++|-.. ..-..++...+.+|... .+.|..+|.+|.+.. |+. ...+..-+.+|...|++..
T Consensus 5 ~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~----p~~-~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF----PNH-QALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp --CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTC-HHHHHHHHHHHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCc-hHHHHHHHHHHHHcCCHHH
Confidence 345677777776654 45566666666666543 334555555544432 222 2233334455555666677
Q ss_pred HHHHHHHHHHHHH---HhhhHHHHHHHHHH
Q psy11025 391 AAEYISRAARMCV---RVKEFDKAADLIRQ 417 (535)
Q Consensus 391 Aa~~l~kaAel~e---~~~~y~~Aie~ye~ 417 (535)
|..++.++.++.- ....|.+|+..|..
T Consensus 80 A~~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 80 GVELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 7766666665532 13455666665543
No 196
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=91.50 E-value=1.4 Score=33.47 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=44.2
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHh
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAH 383 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~ 383 (535)
.-+.+|.+.+++.+|...|.+|......+ ...+...+.++... ++++|+.+|++|+++..
T Consensus 14 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 14 NLGNAYYKQGDYDEAIEYYQKALELDPNN----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (91)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34566777778899999999988764333 23566667777665 49999999999998754
No 197
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.96 E-value=4.7 Score=42.49 Aligned_cols=176 Identities=11% Similarity=0.057 Sum_probs=93.4
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHH--hcCCcH---HHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELK-SDAALTLYSRAADVA--HGEDNY---KQAAE 393 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely--~~egr~---~~Aa~ 393 (535)
.-..++.++++|....+.+.--..-+-..+...+.....+-..+.+.. .+. +....-++.. ..+|+. ..-++
T Consensus 61 ~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~~~d~--~~~~~~i~~l~~vte~kiflE~erar 138 (445)
T 4b4t_P 61 KIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKSLDL--NTRISVIETIRVVTENKIFVEVERAR 138 (445)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHCTTHH--HHHHHHHHCCSSSSSCCCCCCHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCchhH--HHHHHHHHHHHHHhccchHHHHHHHH
Confidence 456677777777766554432221111123323333333334443321 222 2222222221 233442 23567
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccccc
Q psy11025 394 YISRAARMCVRVKEFDKAADLIRQEI-GYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCESGS 472 (535)
Q Consensus 394 ~l~kaAel~e~~~~y~~Aie~ye~~~-~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~sre 472 (535)
+-.+.|.+++..|+|.+|++++...- +.+...+...+. .+.+-.+-+++..+|.+.|...+.+.-.
T Consensus 139 l~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kv-e~~l~q~rl~l~~~d~~~a~~~~~ki~~------------ 205 (445)
T 4b4t_P 139 VTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKI-QFILEQMELSILKGDYSQATVLSRKILK------------ 205 (445)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHH------------
Confidence 78899999999999999999998874 222222111111 1222222335678999999888876311
Q ss_pred ccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 473 SSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 473 ~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.+...........+...-.|.++++.+|+..|-+.|-+
T Consensus 206 ----------~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 206 ----------KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp ----------HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ----------hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 01111112333444456668888888888888877765
No 198
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=90.18 E-value=6.9 Score=39.48 Aligned_cols=179 Identities=15% Similarity=0.062 Sum_probs=85.1
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 323 TLYSRAADVAHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 323 ~lYekAA~~~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
+.-..+|++.||-..|.--+.=|.+ ..++|...+.+.|..+-+.+ ...|+++-.--++.|...+-.- ..+.+.++.
T Consensus 21 ~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~-~~~~~~rl~ 99 (312)
T 2wpv_A 21 ENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKV-DDISVARLV 99 (312)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCC-SHHHHHHHH
T ss_pred HHHhhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCC-CHHHHHHHH
Confidence 3344556677777666555444432 33456666666666554433 5566666555556655554221 233555555
Q ss_pred HHHHHhhhHH-HHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCcccc
Q psy11025 400 RMCVRVKEFD-KAADLIRQEIGYHQES--------EHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCES 470 (535)
Q Consensus 400 el~e~~~~y~-~Aie~ye~~~~~~~a~--------e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~s 470 (535)
+|+.....-+ .=..+..++..|.... +.....+ ......++...|..-|- ++.+ .+
T Consensus 100 ~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a-------~~~~~e~~~~~A~~H~i----~~~~----~s 164 (312)
T 2wpv_A 100 RLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIG-------SKLLEGDFVYEAERYFM----LGTH----DS 164 (312)
T ss_dssp HHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHH-------HHHHHTTCHHHHHHHHH----TSCH----HH
T ss_pred HHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH-------HHHhhcCCHHHHHHHHH----hCCC----cc
Confidence 5553310000 0012222223332211 1111112 12223455555555442 0000 00
Q ss_pred ccccccccccccchhhhh--hhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 471 GSSSFSFSLGKAGYHQES--EHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 471 re~~~l~~L~l~ay~~~~--~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
-..+... +..+.... +..+..+-....+||.+||.++.-.|...+..
T Consensus 165 -~~~~a~~--l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~ 213 (312)
T 2wpv_A 165 -MIKYVDL--LWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDI 213 (312)
T ss_dssp -HHHHHHH--HHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHH
T ss_pred -HHHHHHH--HHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 0011111 22232221 23455666678899999999999999999886
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=89.96 E-value=2.8 Score=43.62 Aligned_cols=122 Identities=16% Similarity=0.033 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHhchHHHHHHHHHHHHH-H--H--hCHHHHHHHHH------------HHHHHHHhC-----CHHHHHHH
Q psy11025 317 KPDAALTLYSRAADVAHGEDNYKQAAEY-I--S--RNREAASTVLE------------KGAKSLEEL-----KSDAALTL 374 (535)
Q Consensus 317 K~D~AA~lYekAA~~~eAa~af~kAA~~-y--~--~~~~~AA~~l~------------~AAk~~ek~-----~~~eAie~ 374 (535)
.++.|..+|++|+ . .-..++...+.+ | . +....|...|. ..+.+|... ++++|+.+
T Consensus 232 d~~~A~~~~~~aa-~-g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~ 309 (452)
T 3e4b_A 232 DEKTAQALLEKIA-P-GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAH 309 (452)
T ss_dssp CHHHHHHHHHHHG-G-GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHc-C-CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 5678999999987 2 222222333333 2 1 12233444443 445566654 78999999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh----cC
Q psy11025 375 YSRAADVAHGEDNYKQAAEYISRAARMCVR----VKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLA----RG 446 (535)
Q Consensus 375 y~kAaely~~egr~~~Aa~~l~kaAel~e~----~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~----~~ 446 (535)
|++|+ .|.. ..+..+|.+|.. ..++++|+.+|+++++.-.. +.....+ .++.. ..
T Consensus 310 ~~~Aa-----~g~~----~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~-~A~~~Lg-------~~y~~G~g~~~ 372 (452)
T 3e4b_A 310 FEKAV-----GREV----AADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQN-SADFAIA-------QLFSQGKGTKP 372 (452)
T ss_dssp HHTTT-----TTCH----HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCT-THHHHHH-------HHHHSCTTBCC
T ss_pred HHHHh-----CCCH----HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChH-HHHHHHH-------HHHHhCCCCCC
Confidence 99999 3322 345667788876 34999999999998764221 1222222 22221 34
Q ss_pred CHHHHHHHHHH
Q psy11025 447 DTVAAEKAFKE 457 (535)
Q Consensus 447 D~vaA~~~~e~ 457 (535)
|.+.|...|++
T Consensus 373 d~~~A~~~~~~ 383 (452)
T 3e4b_A 373 DPLNAYVFSQL 383 (452)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 77778777775
No 200
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=89.63 E-value=0.38 Score=51.17 Aligned_cols=21 Identities=14% Similarity=0.042 Sum_probs=13.3
Q ss_pred HHHHHHhccCCHHHHHHHHHH
Q psy11025 500 ALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 500 ~a~lc~L~~gD~V~A~~a~~~ 520 (535)
.++-++...|-...|-+.|+.
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~ 232 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEA 232 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHH
Confidence 345566677777777666654
No 201
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=89.47 E-value=6.5 Score=39.62 Aligned_cols=130 Identities=11% Similarity=0.024 Sum_probs=75.7
Q ss_pred HHHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy11025 357 EKGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLA 435 (535)
Q Consensus 357 ~~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~ 435 (535)
.-+|.++.. .++++|++++.+.++. |......+++..+++++.+.++++.|.+.+++..+.....-.-.....+.
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~----~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~ 179 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDN----DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILN 179 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTS----SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhcc----CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHH
Confidence 345565554 4589999999876331 11134567788888999999999999999987654432100001111122
Q ss_pred HHHHHHHHhcC--CHHHHHHHHHHhhhccCCCCccccccccccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHH
Q psy11025 436 VALVLVQLARG--DTVAAEKAFKEWGNCCEAPERCESGSSSFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVA 513 (535)
Q Consensus 436 la~il~~L~~~--D~vaA~~~~e~~~~~~~~~~f~~sre~~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~ 513 (535)
++...+.|..| +...|..+|++... . |- ++. ...+ +.. |++.+|++..
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~---~-------------------~p----~~~-~~~l-Lln--~~~~~g~~~e 229 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQ---T-------------------FP----TWK-TQLG-LLN--LHLQQRNIAE 229 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHT---T-------------------SC----SHH-HHHH-HHH--HHHHHTCHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHH---h-------------------CC----Ccc-cHHH-HHH--HHHHcCCHHH
Confidence 22334455444 55557777776322 1 10 000 1122 232 8999999999
Q ss_pred HHHHHHH
Q psy11025 514 AEKAFKE 520 (535)
Q Consensus 514 A~~a~~~ 520 (535)
|+..|+.
T Consensus 230 Ae~~L~~ 236 (310)
T 3mv2_B 230 AQGIVEL 236 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 202
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=89.46 E-value=0.92 Score=48.01 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=59.2
Q ss_pred hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH
Q psy11025 365 ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLAVALVLVQL 443 (535)
Q Consensus 365 k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~la~il~~L 443 (535)
..++++|+++|++|+++.... +..+...|.++...++|++|++.|+++.+..-.. ..+...+ .+++
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg-------~~~~ 85 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA-------ASNM 85 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH-------HHHH
T ss_pred hCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH-------HHHH
Confidence 345999999999999985443 5678889999999999999999999987653221 1222222 3445
Q ss_pred hcCCHHHHHHHHHHhh
Q psy11025 444 ARGDTVAAEKAFKEWG 459 (535)
Q Consensus 444 ~~~D~vaA~~~~e~~~ 459 (535)
..|+...|...|++.-
T Consensus 86 ~~g~~~eA~~~~~~al 101 (477)
T 1wao_1 86 ALGKFRAALRDYETVV 101 (477)
T ss_dssp HHTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 5677777888888743
No 203
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=89.39 E-value=10 Score=38.71 Aligned_cols=172 Identities=15% Similarity=0.095 Sum_probs=82.8
Q ss_pred HHHhch---HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 326 SRAADV---AHGEDNYKQAAEYISR--NREAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 326 ekAA~~---~eAa~af~kAA~~y~~--~~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
..+|++ +||-..|.--+.=|.+ .-++|.+.+.+.|..+-+.+ ...|+++-.--++.|...+-.- ..+.+.++.
T Consensus 23 I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~-~~~~~~rL~ 101 (336)
T 3lpz_A 23 IAEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRV-DGASRGKLL 101 (336)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCC-CHHHHHHHH
T ss_pred HhCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCC-CHHHHHHHH
Confidence 345667 6666666555544432 33456666666665555443 5556666555555555443211 114555555
Q ss_pred HHHHHhh--hHHHHHHHHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCCccc
Q psy11025 400 RMCVRVK--EFDKAADLIRQEIGYHQESE--------HLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGNCCEAPERCE 469 (535)
Q Consensus 400 el~e~~~--~y~~Aie~ye~~~~~~~a~e--------~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~~~~~~~f~~ 469 (535)
+|+.... ..++ ..+..++..|....+ .....+ .+....++...|..-|- ++
T Consensus 102 ~L~~~~~~~~p~r-~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig-------~~~~~e~~~~~Ae~H~i----lg------- 162 (336)
T 3lpz_A 102 GCLRLFQPGEPVR-KRFVKEMIDWSKKFGDYPAGDPELHHVVG-------TLYVEEGEFEAAEKHLV----LG------- 162 (336)
T ss_dssp HHHTTSCTTCHHH-HHHHHHHHHHHHHHSSCTTCCHHHHHHHH-------HHHHHTTCHHHHHHHHT----TS-------
T ss_pred HHHHhCCCCCcHH-HHHHHHHHHHHhhcCCCCCCCHHHHHHHH-------HHHHccCCHHHHHHHHH----hc-------
Confidence 5554311 1111 223333333332211 111111 12223345554544441 11
Q ss_pred cccc--cccccccccchhhhhhhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q psy11025 470 SGSS--SFSFSLGKAGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 470 sre~--~~l~~L~l~ay~~~~~~~~~~~~l~l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
+.++ .+... +-.+..... .....-....+||++||.++...|..+++.
T Consensus 163 ~~~s~~~~a~m--L~ew~~~~~-~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 163 TKESPEVLARM--EYEWYKQDE-SHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp CTTHHHHHHHH--HHHHHHTSC-GGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCchHHHHHHH--HHHHHHhcC-CccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 1121 21222 223322222 344566668899999999999999998765
No 204
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.20 E-value=2.8 Score=43.83 Aligned_cols=128 Identities=11% Similarity=0.089 Sum_probs=87.0
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAA 399 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaA 399 (535)
+=|+.|.+.|++.+|.++|.++-+-....++-.-.++....-++...|+..+...+.+|-.++...|....-+.+..-.|
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~g 215 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYG 215 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH
Confidence 56789999999999999999876543334443444555555566677899999999999999888877766666655555
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCH
Q psy11025 400 RMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDT 448 (535)
Q Consensus 400 el~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~ 448 (535)
.+....++|.+|+..|-+....+...+..... ...+-.++|.+...+.
T Consensus 216 l~~l~~r~f~~Aa~~f~e~~~t~~~~e~~~~~-~~~~y~~l~al~~~~r 263 (429)
T 4b4t_R 216 IHCLAVRNFKEAAKLLVDSLATFTSIELTSYE-SIATYASVTGLFTLER 263 (429)
T ss_dssp HGGGGTSCHHHHHHHHHHHHHHSCCSCHHHHH-HHHHHHHHHHHHTTCH
T ss_pred HHHHHhChHHHHHHHHHHHhccCCccchhhHH-HHHHHHHHHHHhcCCH
Confidence 55556789999999998876665443332111 1112234566655554
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=88.52 E-value=6.4 Score=39.65 Aligned_cols=126 Identities=9% Similarity=0.013 Sum_probs=73.6
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNR-EAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~-~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
-++..|...+++.+|.+.+.+... ..+ ...-.++..++.++.+.+ ++.|.+.+++..+...+.-..+. ..+..
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~---~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d--~~l~~ 179 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGID---NDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDN--EMILN 179 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHT---SSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHH--HHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhc---cCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccch--HHHHH
Confidence 466777777778888887776522 111 123455666777777665 88888888776555331000001 12333
Q ss_pred HHHH----HHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 398 AARM----CVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 398 aAel----~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
+++- ....++|++|..+|++..+.+.. + ....+.+. |++..|+...|...++.
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~---~-~~~~lLln---~~~~~g~~~eAe~~L~~ 236 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPT---W-KTQLGLLN---LHLQQRNIAEAQGIVEL 236 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS---H-HHHHHHHH---HHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCC---c-ccHHHHHH---HHHHcCCHHHHHHHHHH
Confidence 4433 33234999999999997665532 0 11111111 56677888889888875
No 206
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=87.80 E-value=6.1 Score=44.07 Aligned_cols=128 Identities=8% Similarity=0.097 Sum_probs=84.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh--------CH----------HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR--------NR----------EAASTVLEKGAKSLEEL-KSDAALTLYSRAAD 380 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~--------~~----------~~AA~~l~~AAk~~ek~-~~~eAie~y~kAae 380 (535)
..++++++.+++.+|-+.|.++.+.... .| ..-+..+...+++.... +.+.|-.+|.+|.+
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5778888888888888888888876421 11 12345677777776653 58889999999987
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 381 VAHGEDNYKQAAEYISRAARMCVRVK-EFDKAADLIRQEIGYHQESEHLL-AIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 381 ly~~egr~~~Aa~~l~kaAel~e~~~-~y~~Aie~ye~~~~~~~a~e~~~-~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
..... ....+.+.|.|-...+ +++.|-.+|++..+.+.....+- ..+++ . ...+|...|..+|++.
T Consensus 463 ~~~~~-----~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~f-----e--~~~~~~~~AR~lfera 530 (679)
T 4e6h_A 463 LKKLV-----TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDF-----L--IYVNEESQVKSLFESS 530 (679)
T ss_dssp TGGGS-----CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHH-----H--HHHTCHHHHHHHHHHH
T ss_pred hcCCC-----ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHH-----H--HhCCCHHHHHHHHHHH
Confidence 62111 1345666776655554 59999999999988876543332 22222 2 2347888899999974
Q ss_pred h
Q psy11025 459 G 459 (535)
Q Consensus 459 ~ 459 (535)
-
T Consensus 531 l 531 (679)
T 4e6h_A 531 I 531 (679)
T ss_dssp T
T ss_pred H
Confidence 3
No 207
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=87.30 E-value=8 Score=43.09 Aligned_cols=132 Identities=9% Similarity=-0.042 Sum_probs=76.9
Q ss_pred HHHHHHHHHhchHHHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcC--------C-c-
Q psy11025 320 AALTLYSRAADVAHGE-DNYKQAAEYISRNREAASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGE--------D-N- 387 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa-~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~e--------g-r- 387 (535)
.+|..+++-++..+|. +.|.+|... +|. ....+...|.+.+.. ++++|-++|+++++.+... . .
T Consensus 348 ~ya~~~~~~~~~~~a~r~il~rAi~~---~P~-s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~ 423 (679)
T 4e6h_A 348 NMANYQGEKNTDSTVITKYLKLGQQC---IPN-SAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNE 423 (679)
T ss_dssp HHHHHHHHHSCCTTHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcch
Confidence 5555555555556676 777777643 232 123455667777765 4899999999999875211 0 0
Q ss_pred ------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHhhh
Q psy11025 388 ------YKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLA-RGDTVAAEKAFKEWGN 460 (535)
Q Consensus 388 ------~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~-~~D~vaA~~~~e~~~~ 460 (535)
...-.......+++..+.+..+.|-.+|+++....... ..++++..+.+... .+|...|.++|+..-.
T Consensus 424 ~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-----~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk 498 (679)
T 4e6h_A 424 SAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-----TPDIYLENAYIEYHISKDTKTACKVLELGLK 498 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-----CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred hhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-----ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 11234466677777777888999999998886541110 01222221122222 3445568888887433
No 208
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=85.38 E-value=2.8 Score=41.72 Aligned_cols=65 Identities=12% Similarity=-0.106 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy11025 353 STVLEKGAKSLEELK-SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIG 420 (535)
Q Consensus 353 A~~l~~AAk~~ek~~-~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~ 420 (535)
+..+.-.+.+++..+ +++|+.+|++|.. +..-+....+..-..|-++...|+.++|...|++...
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~---g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEAND---SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT---STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhc---CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 445556677777765 8999999998872 2211333556666777788888999999999998743
No 209
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=84.75 E-value=26 Score=36.38 Aligned_cols=99 Identities=12% Similarity=-0.019 Sum_probs=77.3
Q ss_pred HHHHHHHh-CCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Q psy11025 358 KGAKSLEE-LKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQES-EHLLAIGRLA 435 (535)
Q Consensus 358 ~AAk~~ek-~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~-e~~~~a~rl~ 435 (535)
+-+++|-+ .+..+|..++.+..+-....+....-.+++.--.+++-..+++.++-.+|.++...-.+. ......+.+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 44556655 458999999998888877766667888888888889999999999999999987666554 3355667777
Q ss_pred HHHHHHHH-hcCCHHHHHHHHH
Q psy11025 436 VALVLVQL-ARGDTVAAEKAFK 456 (535)
Q Consensus 436 la~il~~L-~~~D~vaA~~~~e 456 (535)
...++.++ +.+|+..|-..|-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~ 205 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFY 205 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHH
Confidence 88889999 8999988766654
No 210
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=84.65 E-value=8.9 Score=31.55 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHG----EDNYKQAAEYISRAARMCVRVKEFDKAA 412 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~----egr~~~Aa~~l~kaAel~e~~~~y~~Ai 412 (535)
|.....+|.++=...+.++|+.+|..|+++|.. +.....-..+..++.+.+.+.+.....+
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK~~l 79 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYL 79 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555554455678888888888887643 2233444445556666666555444433
No 211
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=84.34 E-value=3.9 Score=43.06 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=65.1
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh-------CHHHHHHHHHHHH-HH-----------HHhC--CHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR-------NREAASTVLEKGA-KS-----------LEEL--KSDAALTLYSRA 378 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~-------~~~~AA~~l~~AA-k~-----------~ek~--~~~eAie~y~kA 378 (535)
.=++...+.+||-|||-|+..+|.++.+ .+... ..+.... ++ +... .-..-+++|.+|
T Consensus 16 ~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~-~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll~~a 94 (428)
T 2wm9_A 16 SMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGC-TAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQC 94 (428)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCG-GGGTTTCGGGGGGC---------CCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCH-HHHhhcCCCccchhccccccCCCccccCHHHHHHHHHHH
Confidence 5677777888888999888876654321 00000 0000000 00 0000 123345678888
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 379 ADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 379 aely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
+++|...+....|..+++.++.+|+...+|.+-.+++...++.|..
T Consensus 95 i~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~a~~y~~ 140 (428)
T 2wm9_A 95 ADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAYSK 140 (428)
T ss_dssp HHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888888888877888877777777766654
No 212
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=83.90 E-value=1.9 Score=45.67 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Q psy11025 374 LYSRAADVAHGEDNYKQAAEYISRAARMCVRV-KEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 374 ~y~kAaely~~egr~~~Aa~~l~kaAel~e~~-~~y~~Aie~ye~~~~~~~ 423 (535)
+|.+|+++|...+....|..+++.++.+|+.. -+|.+-.+++...+.+|.
T Consensus 94 L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~ 144 (436)
T 2yin_A 94 LYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYE 144 (436)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666665556666666666666666653 566665555555555544
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.96 E-value=15 Score=40.11 Aligned_cols=66 Identities=12% Similarity=0.048 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh---------hHHHHHHHHH------HHHHHHHHhcCCHHHHHHHHH
Q psy11025 392 AEYISRAARMCVRVKEFDKAADLIRQEIGYHQES---------EHLLAIGRLA------VALVLVQLARGDTVAAEKAFK 456 (535)
Q Consensus 392 a~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~---------e~~~~a~rl~------la~il~~L~~~D~vaA~~~~e 456 (535)
-...+++|+++++.++++.|+..|.+..++.... +...++++.. ..++.+.+..||...|.++|.
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~ 760 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLI 760 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHH
Confidence 3466788888888888888888888875543211 1122222211 112344555667777777776
Q ss_pred H
Q psy11025 457 E 457 (535)
Q Consensus 457 ~ 457 (535)
+
T Consensus 761 ~ 761 (814)
T 3mkq_A 761 K 761 (814)
T ss_dssp H
T ss_pred H
Confidence 5
No 214
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.37 E-value=14 Score=29.57 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHHHHhhhH
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHG----EDNYKQAAEYISRAARMCVRVKEF 408 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~----egr~~~Aa~~l~kaAel~e~~~~y 408 (535)
|.....+|.+.=...+.++|+.+|..|+++|.. +.....-..+..++.+.+.+.+..
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~L 73 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQL 73 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444443444577777777777777543 222333334444555555544333
No 215
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=80.02 E-value=9.7 Score=32.78 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=16.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAH 383 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~ 383 (535)
+.+|..+=+..+.++|+.+|..|+++|.
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 3344333334457777777777777654
No 216
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=79.94 E-value=14 Score=29.93 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHhhh
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHGE----DNYKQAAEYISRAARMCVRVKE 407 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~e----gr~~~Aa~~l~kaAel~e~~~~ 407 (535)
|.....+|.+.=+..+.++|+.+|..|+++|..- -.+..-..+..++.+.+.+.+.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE~ 75 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 75 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555544556888888888888886422 1222223344455555554433
No 217
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.84 E-value=50 Score=34.49 Aligned_cols=104 Identities=11% Similarity=0.091 Sum_probs=73.0
Q ss_pred HHHHHHHHhchHHHHHHHHHH-HHHHHh-CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHhcCCcHHHHHHHHH
Q psy11025 321 ALTLYSRAADVAHGEDNYKQA-AEYISR-NREA-ASTVLEKGAKSLEELKSDAALTLYSRAAD-VAHGEDNYKQAAEYIS 396 (535)
Q Consensus 321 AA~lYekAA~~~eAa~af~kA-A~~y~~-~~~~-AA~~l~~AAk~~ek~~~~eAie~y~kAae-ly~~egr~~~Aa~~l~ 396 (535)
=+.+|+..|++.+|++....- .+++.. .+.. .--.+.+.--+++..|+..|-.++.++.. .+....-+..=+.++.
T Consensus 143 La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~ 222 (445)
T 4b4t_P 143 LVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYN 222 (445)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHH
Confidence 478888888888888887653 233322 2222 23345555556667788888888888865 4555556677778888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q psy11025 397 RAARMCVRVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 397 kaAel~e~~~~y~~Aie~ye~~~~~~~a 424 (535)
-.|.++...++|.+|...|...-+.+..
T Consensus 223 ~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 223 LLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 8888888888999999998888766644
No 218
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=77.15 E-value=30 Score=34.77 Aligned_cols=145 Identities=10% Similarity=-0.025 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHhc-------hHHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHhcC
Q psy11025 316 LKPDAALTLYSRAAD-------VAHGEDNYKQAAEYISRNREA-ASTVLEKGAKSLEELKS--DAALTLYSRAADVAHGE 385 (535)
Q Consensus 316 ~K~D~AA~lYekAA~-------~~eAa~af~kAA~~y~~~~~~-AA~~l~~AAk~~ek~~~--~eAie~y~kAaely~~e 385 (535)
-++++|.++....|. +.-|++.-.--.++|.+.+.. ......+..+++....+ ..=..+..+|+.+-...
T Consensus 47 ~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~ 126 (312)
T 2wpv_A 47 KSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKF 126 (312)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhc
Confidence 367777777665553 455666655666666553211 12345666677765321 12367788888886544
Q ss_pred CcH-HHHHHHHHHHHHHHHHhhhHHHHHHHHH------------HHHHHHHHh--hHHHHHHHHHHHHHHHHHhcCCHHH
Q psy11025 386 DNY-KQAAEYISRAARMCVRVKEFDKAADLIR------------QEIGYHQES--EHLLAIGRLAVALVLVQLARGDTVA 450 (535)
Q Consensus 386 gr~-~~Aa~~l~kaAel~e~~~~y~~Aie~ye------------~~~~~~~a~--e~~~~a~rl~la~il~~L~~~D~va 450 (535)
|.. .=--+...-+|+.+.+.++|.+|-..|- -..+++... +....+.-..+-+||..|+.++...
T Consensus 127 g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~ 206 (312)
T 2wpv_A 127 SEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISF 206 (312)
T ss_dssp SSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHH
T ss_pred CCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHH
Confidence 321 1112566777888877788888777653 112333322 3344455555556789999999999
Q ss_pred HHHHHHHhhh
Q psy11025 451 AEKAFKEWGN 460 (535)
Q Consensus 451 A~~~~e~~~~ 460 (535)
|..+|+.|..
T Consensus 207 A~~~~~~f~~ 216 (312)
T 2wpv_A 207 AHESKDIFLE 216 (312)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988654
No 219
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=76.10 E-value=9.1 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAH 383 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~ 383 (535)
|.....+|.++=+..+.++|+.+|.+|+++|.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 44445555554444557777777777777754
No 220
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=75.50 E-value=49 Score=30.25 Aligned_cols=103 Identities=9% Similarity=-0.031 Sum_probs=63.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC---cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHH-
Q psy11025 356 LEKGAKSLEELKSDAALTLYSRAADVAHGED---NYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAI- 431 (535)
Q Consensus 356 l~~AAk~~ek~~~~eAie~y~kAaely~~eg---r~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a- 431 (535)
+.+.-+++....++.|+-++..++.+..... .+..-++.+.-.|+.+-..+.|.+|..+|+++.............
T Consensus 24 ~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~ 103 (167)
T 3ffl_A 24 IDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVR 103 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3444455555557777777777777764432 366777777777777777778888888888876554321111000
Q ss_pred ------------------HHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 432 ------------------GRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 432 ------------------~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
..++..+..|++..+....|+..++.+
T Consensus 104 ~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 104 PSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred ccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 022222347888888888899998864
No 221
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.33 E-value=24 Score=32.56 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=57.7
Q ss_pred hCCHHHHHHHHHHHHHH------HhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q psy11025 365 ELKSDAALTLYSRAADV------AHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVAL 438 (535)
Q Consensus 365 k~~~~eAie~y~kAael------y~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~ 438 (535)
+.+.+-|..||.++-++ |...|.. +-+.+.+++.+..+++.-|...+--.++.-...+.+.+.+++-.|+
T Consensus 47 ~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~----e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~ 122 (177)
T 3mkq_B 47 QGNASLAEMIYQTQHSFDKLSFLYLVTGDV----NKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAY 122 (177)
T ss_dssp TTCHHHHHHHHHHTTCHHHHHHHHHHHTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHH
T ss_pred cCChHHHHHHHHHhCCHHHHHHHHHHhCCH----HHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHH
Confidence 34456666666655443 3334432 5566777777777777777777766666666666777777777777
Q ss_pred HHHHHhcCCHHHHHHHHHHhh
Q psy11025 439 VLVQLARGDTVAAEKAFKEWG 459 (535)
Q Consensus 439 il~~L~~~D~vaA~~~~e~~~ 459 (535)
+.++-+..+. .|..+.+..+
T Consensus 123 ~~A~t~g~~~-~a~~~~~~~~ 142 (177)
T 3mkq_B 123 AVAKANGDEA-AASAFLEQAE 142 (177)
T ss_dssp HHHHHTTCHH-HHHHHHHHTT
T ss_pred HHHHHcCcHH-HHHHHHHHhC
Confidence 7777654444 4667777643
No 222
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=74.48 E-value=16 Score=38.36 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy11025 391 AAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIG 432 (535)
Q Consensus 391 Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~ 432 (535)
-.+++.++++++.+.+.|+.|+.+|+.....|+..--+.+.+
T Consensus 87 l~~ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls 128 (428)
T 2wm9_A 87 LMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLA 128 (428)
T ss_dssp HHHHHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 345889999999999999999999999998887753344443
No 223
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=70.50 E-value=14 Score=29.76 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAH 383 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~ 383 (535)
|.....+|.+.=+..+.++|+.+|.+|+++|.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34444444444444457777777777777653
No 224
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=69.89 E-value=21 Score=38.09 Aligned_cols=9 Identities=44% Similarity=0.346 Sum_probs=3.9
Q ss_pred HHHHHHHhc
Q psy11025 78 LRELYAKYS 86 (535)
Q Consensus 78 i~~~~~~~~ 86 (535)
|.++..++.
T Consensus 28 l~eL~~kL~ 36 (526)
T 2wb7_A 28 AAELTAKLR 36 (526)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 334444443
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=69.29 E-value=59 Score=33.49 Aligned_cols=57 Identities=18% Similarity=0.063 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11025 394 YISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKE 457 (535)
Q Consensus 394 ~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~ 457 (535)
++.-.|-++...+++++|+..++++..+-.....+ +..+.++...|+...|...|++
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~-------~llG~~~~~~G~~~eA~e~~~~ 335 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNY-------VLLGKVYEMKGMNREAADAYLT 335 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHH-------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHH-------HHHHHHHHHCCCHHHHHHHHHH
Confidence 44444444444589999999999887764211111 1122345567888888888876
No 226
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=67.49 E-value=23 Score=28.49 Aligned_cols=58 Identities=21% Similarity=0.134 Sum_probs=38.5
Q ss_pred HHhchHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhc
Q psy11025 327 RAADVAHGEDNYKQAAEYISRN---REAASTVLEKGAKSLEELK-SDAALTLYSRAADVAHG 384 (535)
Q Consensus 327 kAA~~~eAa~af~kAA~~y~~~---~~~AA~~l~~AAk~~ek~~-~~eAie~y~kAaely~~ 384 (535)
+-+++.+|..-|.+|..++... +..-+..|..-+.++-+.+ .+.|+.+|++|..+--.
T Consensus 17 ~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 17 TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 3355778888888887776432 1223466777777777654 78888888888776433
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=61.34 E-value=97 Score=28.23 Aligned_cols=90 Identities=12% Similarity=0.010 Sum_probs=61.6
Q ss_pred hchHHHHHHHHHHHHHHHh-----CHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcHHHH-----------
Q psy11025 329 ADVAHGEDNYKQAAEYISR-----NREAASTVLEKGAKSL-EELKSDAALTLYSRAADVAHGEDNYKQA----------- 391 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~-----~~~~AA~~l~~AAk~~-ek~~~~eAie~y~kAaely~~egr~~~A----------- 391 (535)
+.++.|.-....+...... ++..-++.++--|..+ .+.++..|...|++|..+.....|...+
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p 113 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTP 113 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCc
Confidence 5566666666665555443 3445555555555544 5567999999999999998765544332
Q ss_pred --------HHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy11025 392 --------AEYISRAARMCVRVKEFDKAADLIRQE 418 (535)
Q Consensus 392 --------a~~l~kaAel~e~~~~y~~Aie~ye~~ 418 (535)
+++.-|||+.+...+++.+|+.+++..
T Consensus 114 ~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 114 QSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred ccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 368888999999999999999998875
No 228
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=60.00 E-value=62 Score=29.77 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=14.0
Q ss_pred HHHHHHHhccCCHHHHHHHHHH
Q psy11025 499 VALVLVQLARGDTVAAEKAFKE 520 (535)
Q Consensus 499 l~a~lc~L~~gD~V~A~~a~~~ 520 (535)
..+..|+|..||+-.+-+.|.+
T Consensus 93 n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 93 GSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 4456667777777776666644
No 229
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=59.62 E-value=29 Score=35.77 Aligned_cols=50 Identities=12% Similarity=-0.011 Sum_probs=37.6
Q ss_pred hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy11025 365 ELKSDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 365 k~~~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~ 421 (535)
+.++++|+..+++|..+- . + ...+.-.+.+++-.|++++|++.|+++.++
T Consensus 290 ~gd~d~A~~~l~rAl~Ln--~---s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLE--M---S--WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HTCHHHHHHHHHHHHHHC--C---C--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcC--C---C--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 456888888888888883 1 1 234456677788889999999999988654
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=54.94 E-value=62 Score=29.35 Aligned_cols=82 Identities=15% Similarity=0.214 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcC
Q psy11025 369 DAALTLYSRAADVAHG--EDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARG 446 (535)
Q Consensus 369 ~eAie~y~kAaely~~--egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~ 446 (535)
++-.+.|++|+...-- ....++=+....+.|.+ +..++.++|-++|...... -. .| +++++...-..+.+|
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~--hK-kF---AKiwi~~AqFEiRqg 108 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN--CK-KF---AFVHISFAQFELSQG 108 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH--CT-TB---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH--hH-HH---HHHHHHHHHHHHHcc
Confidence 5555566666655321 23344555555555544 3346666666666665443 11 12 333333223344456
Q ss_pred CHHHHHHHHHH
Q psy11025 447 DTVAAEKAFKE 457 (535)
Q Consensus 447 D~vaA~~~~e~ 457 (535)
+...|.+++.+
T Consensus 109 nl~kARkILg~ 119 (161)
T 4h7y_A 109 NVKKSKQLLQK 119 (161)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 66666666665
No 231
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.53 E-value=61 Score=25.83 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIG 420 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~ 420 (535)
.++|..++++|..+--.. .+|.- -.|.++.+.|+|.+|++++++..+
T Consensus 25 ~~~A~~~l~~AL~~dp~~---~rA~~---~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYN---EAALS---LIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp CHHHHHHHHHHHHHCTTC---HHHHH---HHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCcCC---HHHHH---HHHHHHHHcCCHHHHHHHHHHHHh
Confidence 578888888888865444 23333 336667778999999999988753
No 232
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=49.51 E-value=1.1e+02 Score=30.94 Aligned_cols=61 Identities=10% Similarity=-0.039 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q psy11025 394 YISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEWGN 460 (535)
Q Consensus 394 ~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~~~ 460 (535)
++...++.+...|++.+|+..++......--.|. +.+. .+.+....|+...|...|+++..
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~---~~~~---lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYREP---LWTQ---LITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH---HHHH---HHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH---HHHH---HHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445556666677888888777766433322222 1111 12345567888888888876443
No 233
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=48.52 E-value=1.6e+02 Score=26.72 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=73.6
Q ss_pred CCHH---HHHHHHHHHhch------HHHHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q psy11025 316 LKPD---AALTLYSRAADV------AHGEDNYKQAAEYISRNR----EAASTVLEKGAKSLEELKSDAALTLYSRAADVA 382 (535)
Q Consensus 316 ~K~D---~AA~lYekAA~~------~eAa~af~kAA~~y~~~~----~~AA~~l~~AAk~~ek~~~~eAie~y~kAaely 382 (535)
..|| .-+.+.|+-|+. .+-.++|++|....--.+ ..=+..+++=|...+-.|+++|-+.|+.|..+
T Consensus 11 ~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~- 89 (161)
T 4h7y_A 11 NNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN- 89 (161)
T ss_dssp CSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-
Confidence 4677 678888888887 788888888876531111 11244555555554446799999999999997
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy11025 383 HGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQEIG 420 (535)
Q Consensus 383 ~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~ 420 (535)
--+| ++...-.|++-.+.++...|..++.++..
T Consensus 90 --hKkF---AKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 90 --CKKF---AFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp --CTTB---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --hHHH---HHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 3346 88999999999999999999999988754
No 234
>1jb0_J Photosystem 1 reaction centre subunit IX; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.18.1 PDB: 3pcq_J*
Probab=46.14 E-value=8.5 Score=27.04 Aligned_cols=17 Identities=35% Similarity=0.538 Sum_probs=12.9
Q ss_pred HHHHHHhhhhhccCCCcH
Q psy11025 41 AEQKIAEIIERDFFPDLE 58 (535)
Q Consensus 41 Y~~~L~~II~RDfFPdL~ 58 (535)
.+.++--.|-| ||||++
T Consensus 21 ~tAg~lIEiNR-ffPD~L 37 (41)
T 1jb0_J 21 ITAGILIEFNR-FYPDLL 37 (41)
T ss_dssp HHHHHHHHHHH-HSCCCS
T ss_pred HHHHHHHHHHH-hCcccc
Confidence 35666677888 999985
No 235
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=45.79 E-value=32 Score=27.74 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 390 QAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 390 ~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.|..+..++.+. ...|+|++|+.+|....+.|.
T Consensus 15 ~A~~lv~~Ave~-D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 15 AAATVLKRAVEL-DSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHH
Confidence 344444444332 445777777777777666554
No 236
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=45.51 E-value=92 Score=25.29 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q psy11025 368 SDAALTLYSRAADVAHGEDNYKQAAEYISRAARMCVR 404 (535)
Q Consensus 368 ~~eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~ 404 (535)
.+.|+++..+|++. ...|+...|..+|..+++++..
T Consensus 12 l~~Ai~lv~~Ave~-D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 12 STAAVAVLKRAVEL-DAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHH
Confidence 45666666666554 2234455555555555554443
No 237
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=45.26 E-value=42 Score=35.22 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=62.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHh--C---------HH------H--HHHHHHHHHHHHHhCC-HHHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISR--N---------RE------A--ASTVLEKGAKSLEELK-SDAALTLYSRAA 379 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~--~---------~~------~--AA~~l~~AAk~~ek~~-~~eAie~y~kAa 379 (535)
.=+++..+++||-|||-|+...|+++.= . +. . =-..|.+|++.+.+.. ++.|+.+|+.-+
T Consensus 40 ~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L~ 119 (436)
T 2yin_A 40 KLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKELA 119 (436)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4556666666777777777655555420 0 00 0 1236888999998876 999999999999
Q ss_pred HHHhcC-CcHHHHHHHHHHHHHHHHH
Q psy11025 380 DVAHGE-DNYKQAAEYISRAARMCVR 404 (535)
Q Consensus 380 ely~~e-gr~~~Aa~~l~kaAel~e~ 404 (535)
..|+.. -.+..-++++.+.|++|..
T Consensus 120 ~~yE~~~~Dy~~Ls~~~~~~a~~y~~ 145 (436)
T 2yin_A 120 EQYEMEIFDYELLSQNLIQQAKFYES 145 (436)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 6789999999999999986
No 238
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=44.65 E-value=2.5e+02 Score=27.95 Aligned_cols=101 Identities=11% Similarity=0.008 Sum_probs=69.9
Q ss_pred cccCCHHHHHHHHHHHhch-----------------HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh------CCHH
Q psy11025 313 LEELKPDAALTLYSRAADV-----------------AHGEDNYKQAAEYISRNREAASTVLEKGAKSLEE------LKSD 369 (535)
Q Consensus 313 l~k~K~D~AA~lYekAA~~-----------------~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek------~~~~ 369 (535)
|-+.+++++--+|..|..| .+|...+++|.++- ....-+.++.-.+-+|-. .+++
T Consensus 144 l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLD--P~~~~GsA~~~LG~lY~~vPp~~gGd~e 221 (301)
T 3u64_A 144 LSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLW--PSYQEGAVWNVLTKFYAAAPESFGGGME 221 (301)
T ss_dssp HTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHC--TTHHHHHHHHHHHHHHHHSCTTTTCCHH
T ss_pred HHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhC--CCcccCHHHHHHHHHHHhCCCccCCCHH
Confidence 4467888888888887653 34555555555431 222245567777888887 4699
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHH
Q psy11025 370 AALTLYSRAADVAHGEDNYKQAAEYISRAARMCVR-VKEFDKAADLIRQEIG 420 (535)
Q Consensus 370 eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~-~~~y~~Aie~ye~~~~ 420 (535)
+|.++|++|.++--+.+ .....-.|+.+.. .+++++|..+++++..
T Consensus 222 kA~~~ferAL~LnP~~~-----id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 222 KAHTAFEHLTRYCSAHD-----PDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHCCTTC-----SHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCC-----chHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 99999999999965321 2355566777766 4899999999999854
No 239
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.52 E-value=27 Score=41.02 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHH------hchHHHHHHHHHHHHHHHhC-------HHH------------HHHHHHHHHHHHHhCC-HH
Q psy11025 316 LKPDAALTLYSRA------ADVAHGEDNYKQAAEYISRN-------REA------------ASTVLEKGAKSLEELK-SD 369 (535)
Q Consensus 316 ~K~D~AA~lYekA------A~~~eAa~af~kAA~~y~~~-------~~~------------AA~~l~~AAk~~ek~~-~~ 369 (535)
|=+...+..|.+| +.+++|.++|.+|+...... ... -...|.+..+++++.+ ++
T Consensus 837 ~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~ 916 (1139)
T 4fhn_B 837 WLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYI 916 (1139)
T ss_dssp HSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCH
T ss_pred hccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHH
Confidence 4333344456654 34678888888887554210 000 1367999999999876 89
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy11025 370 AALTLYSRAADVAHGEDNYKQAAEYISRAARMCVRVKEFDKAADLIRQE 418 (535)
Q Consensus 370 eAie~y~kAaely~~egr~~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~ 418 (535)
.++++-+.|++.-..+ ....-..++.++-+.....++|++|-..+-..
T Consensus 917 ~vi~fa~lAi~~~~~~-~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 917 DALEFSLLADASKETD-DEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHHHHCCSC-CHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHHHhccCC-ChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9999999999864433 34444457777877888889999988777544
No 240
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=43.74 E-value=59 Score=27.76 Aligned_cols=21 Identities=14% Similarity=0.450 Sum_probs=13.7
Q ss_pred HhhhHHHHHHHHHHHHHHHHH
Q psy11025 404 RVKEFDKAADLIRQEIGYHQE 424 (535)
Q Consensus 404 ~~~~y~~Aie~ye~~~~~~~a 424 (535)
..++|++|+.+|..+.++|+.
T Consensus 30 ~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHTCHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHH
Confidence 346777777777777666543
No 241
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=43.57 E-value=62 Score=25.86 Aligned_cols=31 Identities=19% Similarity=0.146 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q psy11025 369 DAALTLYSRAADVAHGEDNYKQAAEYISRAAR 400 (535)
Q Consensus 369 ~eAie~y~kAaely~~egr~~~Aa~~l~kaAe 400 (535)
+.|+++..+|++. ...|+...|..+|.++.+
T Consensus 17 ~~Ai~lv~~Ave~-D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 17 EMARKYAINAVKA-DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHhccHHHHHHHHHHHHH
Confidence 4455555555443 333333444443333333
No 242
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.19 E-value=49 Score=38.15 Aligned_cols=72 Identities=10% Similarity=-0.002 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-----------------cCCcHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy11025 351 AASTVLEKGAKSLEELKSDAALTLYSRAADVAH-----------------GEDNYKQAAEYISRAARMCVRVKEFDKAAD 413 (535)
Q Consensus 351 ~AA~~l~~AAk~~ek~~~~eAie~y~kAaely~-----------------~egr~~~Aa~~l~kaAel~e~~~~y~~Aie 413 (535)
.++..|.+|--++...++++|+++|++|+-.+. ..+....-..+|.+|++|+++.+.|+-+++
T Consensus 839 t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~ 918 (950)
T 4gq2_M 839 DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALE 918 (950)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHH
Confidence 344556665544444556677777766663321 111111233488999999999999998888
Q ss_pred HHHHHHHHH
Q psy11025 414 LIRQEIGYH 422 (535)
Q Consensus 414 ~ye~~~~~~ 422 (535)
+-+.+.+..
T Consensus 919 fA~lAI~~~ 927 (950)
T 4gq2_M 919 FSLLADASK 927 (950)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhhc
Confidence 888876543
No 243
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=40.58 E-value=95 Score=33.20 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGY 421 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~ 421 (535)
.+|++++.++|+.+.- |..++|-.+-.++.++
T Consensus 485 E~aGDyy~~AA~k~~y-G~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 485 EMAGDYYVNAARKALN-GDLEQAKIDAEKAKEY 516 (526)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHhc-CccHHHHHHHHHHHHH
Confidence 3556677777776654 5555555444444333
No 244
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=40.11 E-value=1.7e+02 Score=30.70 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=68.3
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHhcCC-cH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLEEL----------KSDAALTLYSRAADVAHGED-NY 388 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~ek~----------~~~eAie~y~kAaely~~eg-r~ 388 (535)
...+.|-|+|++.+|.+.|.+.-..=. .++. .+|.-...+|... +.++|.++|.+-.. .| .+
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv-~pd~--~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~----~G~~P 103 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGV-QLSQ--YHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIV----DKVVP 103 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTC-CCCH--HHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHH----TTCCC
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCC-CCCH--hHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHH----hCCCC
Confidence 456777888889999999987654211 1221 1222223333221 14566666654322 11 11
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 389 KQAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 389 ~~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
+ .-.|.-+...+.+.|++++|.++|++..+.-..-+. ..+.++|-.....|+...|.++|++.
T Consensus 104 d--~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~-----~tyn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 104 N--EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRL-----RSYGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp C--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcc-----ceehHHHHHHHHCCCHHHHHHHHHHH
Confidence 1 235666777888889999999999876432110010 01112233344567887788888763
No 245
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=39.93 E-value=79 Score=25.11 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=12.5
Q ss_pred HHhhhHHHHHHHHHHHHHHHH
Q psy11025 403 VRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 403 e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.+.|+|++|+.+|....+.|.
T Consensus 22 D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHH
Confidence 334666666666666655543
No 246
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=38.90 E-value=1.2e+02 Score=31.79 Aligned_cols=118 Identities=8% Similarity=-0.027 Sum_probs=71.9
Q ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q psy11025 320 AALTLYSRAADVAHGEDNYKQAAEYISRNREAASTVLEKGAKSLE--ELKSDAALTLYSRAADVAHGEDNYKQAAEYISR 397 (535)
Q Consensus 320 ~AA~lYekAA~~~eAa~af~kAA~~y~~~~~~AA~~l~~AAk~~e--k~~~~eAie~y~kAaely~~egr~~~Aa~~l~k 397 (535)
.-+..+++.+...+|-..|.+| .+- + .....+...|.+-- ..+++.|..+|++|+..|... + ++..+
T Consensus 291 ~y~~~~~r~~~~~~AR~i~~~A-~~~---~-~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~--~----~~~~~ 359 (493)
T 2uy1_A 291 NHLNYVLKKRGLELFRKLFIEL-GNE---G-VGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS--T----LLKEE 359 (493)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHH-TTS---C-CCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC--H----HHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHh-hCC---C-CChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC--H----HHHHH
Confidence 4455666667778888888888 321 1 11234554443332 225899999999999988543 3 24455
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHh
Q psy11025 398 AARMCVRVKEFDKAADLIRQEIGYHQESEHLLAIGRLAVALVLVQLARGDTVAAEKAFKEW 458 (535)
Q Consensus 398 aAel~e~~~~y~~Aie~ye~~~~~~~a~e~~~~a~rl~la~il~~L~~~D~vaA~~~~e~~ 458 (535)
.+++....++.++|-.+|++... . ..+....+-.....||...+..+|++-
T Consensus 360 yid~e~~~~~~~~aR~l~er~~k---~-------~~lw~~~~~fE~~~G~~~~~r~v~~~~ 410 (493)
T 2uy1_A 360 FFLFLLRIGDEENARALFKRLEK---T-------SRMWDSMIEYEFMVGSMELFRELVDQK 410 (493)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCC---B-------HHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH---H-------HHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 67777778999999999998621 1 111111111233357777777777763
No 247
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=32.25 E-value=35 Score=39.39 Aligned_cols=71 Identities=18% Similarity=0.073 Sum_probs=39.2
Q ss_pred cccCCHHHHHHHHHHHhc------hHHHHHHHHHHHHHHHh-C------HH------------HHHHHHHHHHHHHHhCC
Q psy11025 313 LEELKPDAALTLYSRAAD------VAHGEDNYKQAAEYISR-N------RE------------AASTVLEKGAKSLEELK 367 (535)
Q Consensus 313 l~k~K~D~AA~lYekAA~------~~eAa~af~kAA~~y~~-~------~~------------~AA~~l~~AAk~~ek~~ 367 (535)
|.+|=+..++..|.+|-- +++|+++|+|||..... + .+ .-+..|.|.++++|+.+
T Consensus 832 L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~ 911 (950)
T 4gq2_M 832 LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 911 (950)
T ss_dssp HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTT
T ss_pred HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcC
Confidence 455655555556666543 56777777777754311 0 00 11235666666666655
Q ss_pred -HHHHHHHHHHHHHHHh
Q psy11025 368 -SDAALTLYSRAADVAH 383 (535)
Q Consensus 368 -~~eAie~y~kAaely~ 383 (535)
++-+|++-+.|++...
T Consensus 912 a~~~vi~fA~lAI~~~~ 928 (950)
T 4gq2_M 912 AYIDALEFSLLADASKE 928 (950)
T ss_dssp CHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHhhcc
Confidence 5666666666665543
No 248
>3nkh_A Integrase; alpha-fold, MRSA protein, structural genomics, PSI-2, protei structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=29.44 E-value=25 Score=32.53 Aligned_cols=38 Identities=11% Similarity=0.032 Sum_probs=16.1
Q ss_pred CCCCCCCCCCCCcccccCCCCCcCChHHHHHHHHhhhh
Q psy11025 13 PLPSATCATPRPASIRQNAAPSYVSPRDAEQKIAEIIE 50 (535)
Q Consensus 13 ~~~~~~~~~~~p~~~r~k~~~~VLdEd~Y~~~L~~II~ 50 (535)
|.+++..++|+|++|..+++..+|++|+.-.=++.+-.
T Consensus 3 ~~~~~~~~~~~~~~k~~~~~~~~lt~~e~~~l~~~~~~ 40 (244)
T 3nkh_A 3 HHHHHSSGVDLGTENLYFQSNAYLELNEIESIIKDINT 40 (244)
T ss_dssp ------------------CCSCCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCccccccccccCCHHHHHHHHHHhhc
Confidence 55677788889999999999999999987776666644
No 249
>2wsc_J PSAJ, PSI-J, photosystem I reaction center subunit IX; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Spinacia oleracea} PDB: 2wse_J* 2wsf_J* 2o01_J* 3lw5_J*
Probab=28.82 E-value=13 Score=26.41 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=9.1
Q ss_pred HHhhhhhccCCCcH
Q psy11025 45 IAEIIERDFFPDLE 58 (535)
Q Consensus 45 L~~II~RDfFPdL~ 58 (535)
+--.|.| ||||++
T Consensus 25 ~lIEiNR-fFPD~L 37 (44)
T 2wsc_J 25 LLIEINR-FFPDAL 37 (44)
T ss_dssp TTTSSTT-TSCCCS
T ss_pred HHHHHHH-hCchHh
Confidence 3334677 999985
No 250
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=28.38 E-value=5.2e+02 Score=26.78 Aligned_cols=27 Identities=4% Similarity=-0.028 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy11025 392 AEYISRAARMCVRVKEFDKAADLIRQE 418 (535)
Q Consensus 392 a~~l~kaAel~e~~~~y~~Aie~ye~~ 418 (535)
...+...+++..+.+..+.|-.+|+++
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A 312 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL 312 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 355666677776777888888888887
No 251
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=24.96 E-value=97 Score=25.62 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhc
Q psy11025 353 STVLEKGAKSLEELK-SDAALTLYSRAADVAHG 384 (535)
Q Consensus 353 A~~l~~AAk~~ek~~-~~eAie~y~kAaely~~ 384 (535)
|..+.+=|+.+-... +++||+|.++|+.++.+
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
No 252
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=23.64 E-value=3.4e+02 Score=27.34 Aligned_cols=89 Identities=6% Similarity=-0.105 Sum_probs=53.5
Q ss_pred hchHHHHHHHHHHHHHHHhC--H------H--H--------HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcHH
Q psy11025 329 ADVAHGEDNYKQAAEYISRN--R------E--A--------ASTVLEKGAKSLEEL-KSDAALTLYSRAADVAHGEDNYK 389 (535)
Q Consensus 329 A~~~eAa~af~kAA~~y~~~--~------~--~--------AA~~l~~AAk~~ek~-~~~eAie~y~kAaely~~egr~~ 389 (535)
+....|...|.+|..+|... + . . -..+++..+..+... ++.+|+..+.+++...-..++
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~-- 206 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREP-- 206 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH--
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH--
Confidence 35677888888888888531 0 0 0 112333333444333 477777777777666444321
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q psy11025 390 QAAEYISRAARMCVRVKEFDKAADLIRQEIGYHQ 423 (535)
Q Consensus 390 ~Aa~~l~kaAel~e~~~~y~~Aie~ye~~~~~~~ 423 (535)
.+......+...|+..+|++.|++..+.+.
T Consensus 207 ----~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 207 ----LWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp ----HHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 233334455667999999999999877664
No 253
>2grr_B RAN GTPase-activating protein 1; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} SCOP: a.118.12.1 PDB: 2grn_B 2grp_B 2grq_B 2gro_B 1z5s_C 3uip_C* 3uio_C 3uin_C* 2io2_C 2io3_C 2iy0_C 1kps_B
Probab=22.26 E-value=28 Score=31.89 Aligned_cols=21 Identities=14% Similarity=0.453 Sum_probs=17.0
Q ss_pred cCChHHHHHHHHhhhhhccCC
Q psy11025 35 YVSPRDAEQKIAEIIERDFFP 55 (535)
Q Consensus 35 VLdEd~Y~~~L~~II~RDfFP 55 (535)
|-+=.--.-+|+||+++||||
T Consensus 115 ~~~l~G~~~aL~~avqq~yFp 135 (170)
T 2grr_B 115 IANLYGPLMALNHMVQQDYFP 135 (170)
T ss_dssp CSCCHHHHHHHHHHTTSTTSC
T ss_pred CCCchHHHHHHHHHhcccccc
Confidence 444455678999999999999
No 254
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.40 E-value=58 Score=38.22 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc----H-------------HHHHHHHHHHHHHHHHhhhHHHHHHH
Q psy11025 352 ASTVLEKGAKSLEELKSDAALTLYSRAADVAHGEDN----Y-------------KQAAEYISRAARMCVRVKEFDKAADL 414 (535)
Q Consensus 352 AA~~l~~AAk~~ek~~~~eAie~y~kAaely~~egr----~-------------~~Aa~~l~kaAel~e~~~~y~~Aie~ 414 (535)
.+..|..|--++...++++|+++|++|+..+...+. . ..-..+|.+++.|+++.+.|+.++++
T Consensus 842 ~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~f 921 (1139)
T 4fhn_B 842 PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 921 (1139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred cHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 445577655555555688888888877654322220 0 01135889999999999999999988
Q ss_pred HHHHHHH
Q psy11025 415 IRQEIGY 421 (535)
Q Consensus 415 ye~~~~~ 421 (535)
-..+.+.
T Consensus 922 a~lAi~~ 928 (1139)
T 4fhn_B 922 SLLADAS 928 (1139)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777654
Done!