BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1103
(59 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 206
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 205
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 208
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T IDIAPN RVGT+RYMAPEVLD++I+ K F++FK AD+Y++G
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S+T+E+DI PNTRVGT+RYM PEVLDE+++ F ++ MADMYS G
Sbjct: 194 SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFG 239
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 11 SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T+++D+ N RVGT+RYMAPEVLDETI FD++K D+++ G
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 11 SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T+++D+ N RVGT+RYMAPEVLDETI FD++K D+++ G
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 11 SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S T+++D+ N RVGT+RYMAPEVLDETI FD++K D+++ G
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 239
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 11 SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
S + +DI N RVGT+RYMAPEVLDE I T F+++K D+++ G
Sbjct: 164 SQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFG 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 24 RVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
+VGTRRYMAPEVL+ I+ + DAF DMY++G
Sbjct: 193 QVGTRRYMAPEVLEGAINFQ-RDAFLRIDMYAMG 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 24 RVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
+VGTRRYMAPEVL+ I+ + DAF DMY++G
Sbjct: 185 QVGTRRYMAPEVLEGAINFQ-RDAFLRIDMYAMG 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 15 SEIDIAPNTRVGTRRYMAPEVLDETIDTKFFD-AFKMADMYSLG 57
E D A + VGT RYMAPEVL+ ++ + + A K DMY+LG
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 34.3 bits (77), Expect = 0.021, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET-IDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I NT VGT +MAPEV+ ++ D+K AD++SLG T
Sbjct: 160 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK-------ADIWSLGIT 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET-IDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I NT VGT +MAPEV+ ++ D+K AD++SLG T
Sbjct: 144 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK-------ADIWSLGIT 193
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET-IDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I NT VGT +MAPEV+ ++ D+K AD++SLG T
Sbjct: 164 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK-------ADIWSLGIT 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.0 bits (71), Expect = 0.090, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 8/57 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET-IDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I N VGT +MAPEV+ ++ D+K AD++SLG T
Sbjct: 144 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK-------ADIWSLGIT 193
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.099, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVL--DETIDTKFFDAFKMADMYSLGPT 59
++++F VS++ NT +GT +MAPEV+ DE D + FK +D++SLG T
Sbjct: 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATY--DFK-SDLWSLGIT 223
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.0 bits (71), Expect = 0.100, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 8/57 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET-IDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I N VGT +MAPEV+ ++ D+K AD++SLG T
Sbjct: 159 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK-------ADIWSLGIT 208
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.0 bits (71), Expect = 0.10, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
++ +F VS+E D + VGT +MAPE L ET K F K D++++G T
Sbjct: 177 KIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSET--RKIFSG-KALDVWAMGVT 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ I N VGT +MAPEV+ ++ +D FK AD++SLG T
Sbjct: 156 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA----YD-FK-ADIWSLGIT 205
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 6 LEFCV--SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
L+ C S++S + P + VGT Y+APEVL + K +D K+AD++S G T
Sbjct: 156 LKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLK----KEYDG-KVADVWSCGVT 206
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
S++S + P + VGT Y+APEVL + K +D K+AD++S G T
Sbjct: 163 SKSSVLHSQPKSTVGTPAYIAPEVLLK----KEYDG-KVADVWSCGVT 205
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
S++S + P + VGT Y+APEVL + K +D K+AD++S G T
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLLK----KEYDG-KVADVWSCGVT 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
++ +F S + I+ T GT +YMAPE++D+ + + K AD++SLG T
Sbjct: 149 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK--GPRGYG--KAADIWSLGCT 200
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
S+ S + P + VGT Y+APEVL + K +D K+AD++S G T
Sbjct: 164 SKASVLHSQPKSAVGTPAYIAPEVLLK----KEYDG-KVADVWSCGVT 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
++ +F S + I+ T GT +YMAPE++D+ + + K AD++SLG T
Sbjct: 163 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK--GPRGYG--KAADIWSLGCT 214
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 6 LEFCV--SSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
L+ C S++S + P VGT Y+APEVL + K +D K+AD++S G T
Sbjct: 156 LKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLK----KEYDG-KVADVWSCGVT 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 21 PNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
P+ VGT YMAPEVL + + +D+ AD +SLG
Sbjct: 347 PHASVGTHGYMAPEVLQKGVA---YDS--SADWFSLG 378
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 21 PNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
P+ VGT YMAPEVL + + +D+ AD +SLG
Sbjct: 347 PHASVGTHGYMAPEVLQKGVA---YDS--SADWFSLG 378
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 21 PNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
P+ VGT YMAPEVL + + +D+ AD +SLG
Sbjct: 347 PHASVGTHGYMAPEVLQKGVA---YDS--SADWFSLG 378
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 21 PNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
P+ VGT YMAPEVL + + +D+ AD +SLG
Sbjct: 346 PHASVGTHGYMAPEVLQKGVA---YDS--SADWFSLG 377
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 12 SETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
S++S + P + VGT Y+APEVL + +D K+AD++S G T
Sbjct: 165 SKSSVLHSQPKSTVGTPAYIAPEVLLR----QEYDG-KIADVWSCGVT 207
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 29.6 bits (65), Expect = 0.46, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YMAPE L T
Sbjct: 155 KLCDFGVSGQL--IDSMANSFVGTRSYMAPERLQGT 188
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 164 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 197
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 29.3 bits (64), Expect = 0.58, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 9 CVSSETSEIDIAPNTRVGTRRYMAPEVLDETID-TKFFDAFKMADMYSLG 57
C T E+ T G+ YMAPEV++ D F+D K D++SLG
Sbjct: 170 CTPITTPEL----TTPCGSAEYMAPEVVEVFTDQATFYD--KRCDLWSLG 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 0.82, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 172 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.9 bits (63), Expect = 0.87, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 145 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.9 bits (63), Expect = 0.87, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 145 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 28.5 bits (62), Expect = 0.95, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 145 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.5 bits (62), Expect = 0.96, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 145 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.5 bits (62), Expect = 0.97, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 145 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 178
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N+ VGTR YM+PE L T
Sbjct: 207 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGT 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 18 DIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
D+A + G + YMAPE ++ ++ K + +D++SLG T
Sbjct: 163 DVAKDIDAGCKPYMAPERINPELNQKGYSV--KSDIWSLGIT 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDET 39
++ +F VS + ID N VGTR YM+PE L T
Sbjct: 148 KLCDFGVSGQL--IDEMANEFVGTRSYMSPERLQGT 181
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 7 EFCVSSETSEIDIAPNTRVGTRRYMAPEVL-----DETIDTKFFDAFKMADMYSLGP 58
+F + E E + +T GT Y+APEVL D T+D A +Y L P
Sbjct: 182 DFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 7 EFCVSSETSEIDIAPNTRVGTRRYMAPEVL 36
+F V+ + E + RVGT +MAPEV+
Sbjct: 176 DFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
R+GT Y+APEVL T D K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEK 202
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
R+GT Y+APEVL T D K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEK 202
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N+ VGT +Y++PE+L E A K +D+++LG
Sbjct: 189 NSFVGTAQYVSPELLTEK------SACKSSDLWALG 218
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N+ VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NSFVGTAQYVSPELLTEK------SASKSSDLWALG 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N+ VGT +Y++PE+L E A K +D+++LG
Sbjct: 193 NSFVGTAQYVSPELLTEK------SACKSSDLWALG 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTK 43
++++F +SS S+ D R+GT Y+APEVL + + K
Sbjct: 189 KIVDFGLSSFFSK-DYKLRDRLGTAYYIAPEVLKKKYNEK 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Query: 24 RVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
R+GT Y+APEVL + D K D++S+G
Sbjct: 198 RLGTAYYIAPEVLRKKYDEK-------CDVWSIG 224
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
R+GT Y+APEVL T D K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEK 202
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NXFVGTAQYVSPELLTEK------SAXKSSDLWALG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 7/34 (20%)
Query: 26 GTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
G RYMAPE+L + T AD++SLG T
Sbjct: 218 GDPRYMAPELLQGSYGTA-------ADVFSLGLT 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVL-DETIDTKFFDAFKMADMYSLG 57
+V +F +S + ++ + GT +MAPEVL DE + K +D+YS G
Sbjct: 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK-------SDVYSFG 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 189 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
++GT Y+APEVL T D K
Sbjct: 194 KIGTAYYIAPEVLHGTYDEK 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 190 NAFVGTAQYVSPELLTEK------SACKSSDLWALG 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 174 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 195 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 168 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 197
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
++GT Y+APEVL T D K
Sbjct: 188 KIGTAYYIAPEVLHGTYDEK 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 190 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 219
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 190 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 219
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 193 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 222
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 192 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 221
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 190 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 219
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 167 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 196
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 169 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 198
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 197 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
++GT Y+APEVL T D K
Sbjct: 212 KIGTAYYIAPEVLHGTYDEK 231
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 23 TRVGTRRYMAPEVLDE-TIDTKFFDAFKMADMYSLG 57
T G+ YMAPEV++ + + +D K D++SLG
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYD--KRCDLWSLG 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
++GT Y+APEVL T D K
Sbjct: 211 KIGTAYYIAPEVLHGTYDEK 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 25 VGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
VGT YMAPE L I K +D+YS G
Sbjct: 190 VGTTAYMAPEALRGEITPK-------SDIYSFG 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 22 NTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
N VGT +Y++PE+L E A K +D+++LG
Sbjct: 170 NXFVGTAQYVSPELLTEK------SACKSSDLWALG 199
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 23 TRVGTRRYMAPEVLDE-TIDTKFFDAFKMADMYSLG 57
T G+ YMAPEV++ + + +D K D++SLG
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYD--KRCDLWSLG 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
R+GT Y+APEVL + D K
Sbjct: 183 RLGTAYYIAPEVLRKKYDEK 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
++GT Y+APEVL T D K
Sbjct: 188 KIGTAYYIAPEVLHGTYDEK 207
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 25 VGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
VGT YMAPE L I K +D+YS G
Sbjct: 196 VGTTAYMAPEALRGEITPK-------SDIYSFG 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 25 VGTRRYMAPEVLDETIDTKFFDAFKMADMYSLG 57
VGT YMAPE L I K +D+YS G
Sbjct: 196 VGTTAYMAPEALRGEITPK-------SDIYSFG 221
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPE-VLDETIDTKFFDAFKMADMYSLGPT 59
++ +F VS++ + ++ +GT +MAPE V+ ET + +D AD++SLG T
Sbjct: 175 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY--KADVWSLGIT 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 26.2 bits (56), Expect = 5.7, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 FCVSSETSEIDIAPNTRVGTRRYMAPEVL 36
F V+ + E + RVGT +MAPEV+
Sbjct: 179 FGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 26.2 bits (56), Expect = 5.7, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 24 RVGTRRYMAPEVLDETIDTK 43
R+GT Y+APEVL + D K
Sbjct: 166 RLGTAYYIAPEVLRKKYDEK 185
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 FCVSSETSEIDIAPNTRVGTRRYMAPEVL 36
F V+ + E + RVGT +MAPEV+
Sbjct: 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
++ +F V+ + ++ N +GT +MAPEV+ E +AD++SLG T
Sbjct: 165 KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE------IGYNCVADIWSLGIT 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 4 EVLEFCVSSETSEIDIAPNTRVGTRRYMAPE-VLDETIDTKFFDAFKMADMYSLGPT 59
++ +F VS++ + ++ +GT +MAPE V+ ET + +D AD++SLG T
Sbjct: 175 KLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY--KADVWSLGIT 229
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 18 DIAPNTRVGTRRYMAPEVLDETIDTKFFDAFKMADMYSLGPT 59
D+A + G + Y APE ++ ++ K + +D++SLG T
Sbjct: 190 DVAKDIDAGCKPYXAPERINPELNQKGYSV--KSDIWSLGIT 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,602,548
Number of Sequences: 62578
Number of extensions: 43642
Number of successful extensions: 252
Number of sequences better than 100.0: 95
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 197
Number of HSP's gapped (non-prelim): 95
length of query: 59
length of database: 14,973,337
effective HSP length: 30
effective length of query: 29
effective length of database: 13,095,997
effective search space: 379783913
effective search space used: 379783913
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)