RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11031
(520 letters)
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 76.1 bits (186), Expect = 1e-16
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSA 284
PL V + G P S K C+ + Y IS G LLR + R K +
Sbjct: 3 PLKVMISGAPASGKGTQCELIKTKY-QLAHISAGDLLRAEIAAGSE---NGKRAKEFMEK 58
Query: 285 GDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQ-IHPPMILIDCS 343
G V ++V+++V +++ E +G ++DG+PR SQ + E ++L
Sbjct: 59 GQLVPDEIVVNMVKERLRQPDAQE-NGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPD 117
Query: 344 KLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVL 403
+L++ + D++ + RLE + + +L E + V GD + V + + +L
Sbjct: 118 ELLVERVVFDDTEEKVKLRLETYYQNIESLLSTY--ENIIVKVQGDATVDAVFAKIDELL 175
Query: 404 KKIIDDLEN 412
I++
Sbjct: 176 GSILEKKNE 184
Score = 42.9 bits (100), Expect = 2e-05
Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 8/170 (4%)
Query: 2 YGPPLYATSLLDFPSHRNPLKMFNLFVSEEVKDFSFLSSKTVTEVLMLEMKMSPAAKAFL 61
Y + L + K V V + +L
Sbjct: 27 YQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWL 86
Query: 62 ISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLLERQIDYGAKLGHVILSLARMELANFY 121
+ GYPR+ + + IL+ LL ++ ++ L +Y
Sbjct: 87 LDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERVV-----FDDTEEKVKLRLETYY 141
Query: 122 QNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNK-NNVVPGS 170
QN+ + + +++ V G+ V+A + IL K N +V +
Sbjct: 142 QNIESLLSTY--ENIIVKVQGDATVDAVFAKIDELLGSILEKKNEMVSST 189
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 70.8 bits (172), Expect = 9e-15
Identities = 39/195 (20%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSA 284
PLVV+V+GGPG+ K C ++++ Y +T +S G+LLR ++ I+ +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKY-GYTHLSAGELLR--DERKNPDSQYGELIEKYIKE 57
Query: 285 GDFVNRDVVLDIV--YAEMKKTKYTEADGIVIDGFPREMSQL------------IDFENK 330
G V ++ + ++ + + + +IDGFPR L + F
Sbjct: 58 GKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLF 117
Query: 331 YQIHPPMILIDCSKLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDT 390
+ + + + C + G+ D++ + +R++ + + T P++ + ++ +D
Sbjct: 118 FDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASK 177
Query: 391 QLPQVREEFERVLKK 405
+ +V +E ++ K
Sbjct: 178 SVDEVFDEVVQIFDK 192
Score = 39.6 bits (91), Expect = 4e-04
Identities = 9/45 (20%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 119 NFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNK 163
+ Q+ P+ D +++ G + ++ ++ EV+ + V++I +K
Sbjct: 152 TYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDE----VVQIFDK 192
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 70.4 bits (171), Expect = 1e-14
Identities = 44/194 (22%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 223 NTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSV 282
+ V++V+GGPG+ K C+K+++DY ++ +S G LLR G IK+ +
Sbjct: 6 DQVSVIFVLGGPGAGKGTQCEKLVKDY-SFVHLSAGDLLRAEQGRAGSQYGE--LIKNCI 62
Query: 283 SAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDC 342
G V +++ L ++ + +IDGFPR+M Q I FE ++ DC
Sbjct: 63 KEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDC 122
Query: 343 SKLVLHK---------GQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLP 393
+ ++ + G+ D+++ + ++R F+E ++P++ + ++++ V D +
Sbjct: 123 PEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVE 182
Query: 394 QVREEFERVLKKII 407
V ++ + ++ +
Sbjct: 183 DVYKDVQDAIRDSL 196
Score = 42.3 bits (98), Expect = 4e-05
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 60 FLISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLL-ERQIDYGAKLGHVILSLA--RME 116
FLI G+PR M + + I ++ + ++ ER ++ G G ++ +
Sbjct: 92 FLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKR 151
Query: 117 LANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKIL 161
F + PV ++F+ + ++ V +R+ +VY D + A+ L
Sbjct: 152 FNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRDSL 196
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 70.0 bits (170), Expect = 1e-14
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 221 ERNTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRY-FANIEDDGEGLNSRIK 279
E++ P VV+V+GGPGS K C +++D+ W +S G LLR + DGE + + IK
Sbjct: 2 EKSKPNVVFVLGGPGSGKGTQCANIVRDF-GWVHLSAGDLLRQEQQSGSKDGEMIATMIK 60
Query: 280 SSVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMIL 339
+ V ++ + + A K ++DGFPR +E +
Sbjct: 61 NGEIVPSIVTVKLLKNAIDANQGK-------NFLVDGFPRNEENNNSWEENMKDFVDTKF 113
Query: 340 ---IDCSKLVL---------HKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVD 387
DC + V+ G+ D+++ + ++R F +T ++ + ++ I+
Sbjct: 114 VLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIP 173
Query: 388 GDTQLPQVREEFERVLKKI 406
+ + +V + E + K +
Sbjct: 174 ANRDVNEVYNDVENLFKSM 192
Score = 34.9 bits (79), Expect = 0.013
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 119 NFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNK 163
F V D +++ + + R+ EVY D V +
Sbjct: 151 TFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYND----VENLFKS 191
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 67.6 bits (164), Expect = 8e-14
Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 3/179 (1%)
Query: 228 VWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRY-FANIEDDGEGLNSRIKSSVSAGD 286
+ ++G PG+ K ++++ Y IS G + R + G S + D
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKY-GTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPD 61
Query: 287 FVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLV 346
V +V + + + DG E + + +I + + + +
Sbjct: 62 EVTIGIVRERLSKSDCDNGFLL-DGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEEL 120
Query: 347 LHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKK 405
+ + D++ RLE+ +T P+L D + L ++G + V ++ + +L+
Sbjct: 121 IARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKDLDVILQG 179
Score = 45.6 bits (107), Expect = 3e-06
Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 47 LMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLLERQIDYGAKLG 106
+ + S FL+ G+PR + + + I + E++
Sbjct: 68 VRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQV-EKEELIARLTA 126
Query: 107 HVILSLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNKN 164
L P+ F+D + +L+ +NG+++ +V+ D + IL N
Sbjct: 127 DDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKD----LDVILQGN 180
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 67.2 bits (163), Expect = 1e-13
Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 228 VWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDF 287
+ ++G PG+ K +K++ Y IS G + R L + K + GD
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAY-GIPHISTGDMFRAAMKEGTP---LGLQAKQYMDRGDL 58
Query: 288 VNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLVL 347
V +V + IV + K +G ++DGFPR ++Q E + V
Sbjct: 59 VPDEVTIGIVRERLSKDDC--QNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVR 116
Query: 348 HKGQIDNSVS-----AFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERV 402
++ + RLE+ ++ P++ + + L ++G+ + +V + +
Sbjct: 117 QDVLMERLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIREL 176
Query: 403 LKKI 406
L +
Sbjct: 177 LGGL 180
Score = 45.3 bits (106), Expect = 4e-06
Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 4/117 (3%)
Query: 47 LMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLLERQIDYGAKLG 106
++ E + + E + + G L + + +
Sbjct: 67 IVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTA 126
Query: 107 HVILSLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNK 163
+ L + + P+ DF++Q+G L +NGE++ +V+AD + ++L
Sbjct: 127 DDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFAD----IRELLGG 179
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 58.4 bits (140), Expect = 2e-10
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSA 284
+++VVGGPGS K C+K++Q Y +T +S G LLR + G + +
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKY-GYTHLSTGDLLRAEVS---SGSARGKMLSEIMEK 63
Query: 285 GDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSK 344
G V + VLD++ M T G +IDG+PRE+ Q +FE K ++ +D
Sbjct: 64 GQLVPLETVLDMLRDAMVAKVDTS-KGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGP 122
Query: 345 LVLHK---------GQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQV 395
+ K G++D++ ++RLE + + T P++ + + V+ + + V
Sbjct: 123 ETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDDV 182
Query: 396 REEFERVLKKI 406
+ L +
Sbjct: 183 FSQVCTHLDTL 193
Score = 40.3 bits (93), Expect = 2e-04
Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Query: 42 TVTEVLMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLLERQIDY 101
+ + + +K FLI GYPR ++ E+ KI ++ + + +++
Sbjct: 72 VLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLLK 131
Query: 102 GAKL---GHVILSLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVL 158
+ + L +Y+ PV F+++RG++ VN E + +V++ V
Sbjct: 132 RGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDDVFSQ----VC 187
Query: 159 KILNK 163
L+
Sbjct: 188 THLDT 192
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 57.2 bits (137), Expect = 3e-10
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 228 VWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDF 287
V ++G PG+ K K+ + QIS G+L R L K + AGD
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKL-GIPQISTGELFRRNIEEGTK---LGVEAKRYLDAGDL 58
Query: 288 VNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMI----LIDCS 343
V D+ ++V + A+G ++DG+PR + Q + I S
Sbjct: 59 VPSDLTNELVDDRLNNPDA--ANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVS 116
Query: 344 KLVLHK-----GQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREE 398
+ VL + G+ D++ R++++R+ T P+L +L VD + +V
Sbjct: 117 EEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYY--RDQLKTVDAVGTMDEVFAR 174
Query: 399 FERVLKK 405
R L K
Sbjct: 175 ALRALGK 181
Score = 38.0 bits (87), Expect = 0.001
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 9/153 (5%)
Query: 14 FPSHRNPLKMFNLFVSEEVKDFSFLSSKTVTEVLMLEMKMSPAAKAFLISGYPRNMRDVV 73
F + + + + S E++ + AA F++ GYPR++
Sbjct: 35 FRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAK 94
Query: 74 EYSDKIKTINGVILIAWRQSLLERQIDYGAKL---GHVILSLARMELANFYQNVTPVTDF 130
+ ++ I + E + K + + + P+ ++
Sbjct: 95 ALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEY 154
Query: 131 FDQRGMLIAVNGERNPVEVYADFRTAVLKILNK 163
+ R L V+ EV+A L+ L K
Sbjct: 155 Y--RDQLKTVDAVGTMDEVFAR----ALRALGK 181
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 54.9 bits (131), Expect = 2e-09
Identities = 32/186 (17%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 230 VVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDFVN 289
++G PG+ K K+ +++ ++ G +LR + ++K+++ AG V+
Sbjct: 8 LLGPPGAGKGTQAPKLAKNF-CVCHLATGDMLRAMVASGSEL---GKKLKATMDAGKLVS 63
Query: 290 RDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLVLHK 349
++VL+++ ++ +G ++DGFPR + Q ++ + + +
Sbjct: 64 DEMVLELIEKNLETPPC--KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDS 121
Query: 350 GQI----------DNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEF 399
I D++ A + RLE + +T P++ + +D V
Sbjct: 122 LLIRRITGRLIHSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASI 181
Query: 400 ERVLKK 405
K
Sbjct: 182 LAAFSK 187
Score = 43.8 bits (102), Expect = 1e-05
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 43 VTEVLMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIAW----RQSLLERQ 98
V E++ ++ P FL+ G+PR +R D ++ + SLL R+
Sbjct: 67 VLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRR 126
Query: 99 IDYGAKLGHVILSLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVL 158
I ++ L ++ TP+ +++ +RG+ A++ + P V+A +L
Sbjct: 127 ITGRLIHSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFAS----IL 182
Query: 159 KILNK 163
+K
Sbjct: 183 AAFSK 187
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 54.5 bits (130), Expect = 3e-09
Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 230 VVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDFVN 289
++G PGS K + ++ + + +S G LL + G+ K+ + G +
Sbjct: 11 IMGAPGSGKGTVSSRITKHF-ELKHLSSGDLL-RDNMLRGTEIGV--LAKTFIDQGKLIP 66
Query: 290 RDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLVLHK 349
DV+ +V E+K ++DGFPR + Q + YQI ++ + K
Sbjct: 67 DDVMTRLVLHELKNLTQ---YNWLLDGFPRTLPQAEALDRAYQID--TVINLNVPFEVIK 121
Query: 350 GQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKII 407
++ + +RL+ + +T P+L + L G T+ ++ L+ +
Sbjct: 122 QRLTDRPETVVKRLKAYEAQTEPVLEYYRKKGVLETFSG-TETNKIWPHVYAFLQTKL 178
Score = 34.0 bits (77), Expect = 0.024
Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 30 EEVKDFSFLSSKTVTEVLMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIA 89
+ D L V L+L + +L+ G+PR + + I+ VI +
Sbjct: 56 KTFIDQGKLIPDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQ-IDTVINLN 114
Query: 90 WRQSLLERQIDYGAKLGHVILSLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEV 149
++++++ + L + PV +++ ++G+L +G ++
Sbjct: 115 VPFEVIKQRLTDRPET-------VVKRLKAYEAQTEPVLEYYRKKGVLETFSGTE-TNKI 166
Query: 150 YADFRTAVLKILNKNN 165
+ + L + +
Sbjct: 167 WPHVYAFLQTKLPQRS 182
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 51.1 bits (121), Expect = 4e-08
Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 7/180 (3%)
Query: 228 VWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDF 287
+ ++G PG+ K + + + + ++ G +LR K + G
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERF-HAAHLATGDMLRSQIAKGTQL---GLEAKKIMDQGGL 60
Query: 288 VNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFEN--KYQIHPPMILIDCSKL 345
V+ D++++++ E+ + +G ++DGFPR + Q + K Q P I+
Sbjct: 61 VSDDIMVNMIKDELTNNPACK-NGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVD 119
Query: 346 VLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKK 405
+ A ++RL + +T P++ VD V + L K
Sbjct: 120 DELLVARITNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADILNKLGK 179
Score = 42.6 bits (99), Expect = 3e-05
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 51 MKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVILIAWRQSLLERQIDYGAKLGHVIL 110
F++ G+PR + + +K + A + + D
Sbjct: 75 TNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKA----IELKVDDELLVARITNA 130
Query: 111 SLARMELANFYQNVTPVTDFFDQRGMLIAVNGERNPVEVYADFRTAVLKILNKN 164
+ LA ++ P+ DF+ + G+ V+ + P V+AD +L L KN
Sbjct: 131 DALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWAD----ILNKLGKN 180
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 42.7 bits (99), Expect = 3e-05
Identities = 31/196 (15%), Positives = 55/196 (28%), Gaps = 22/196 (11%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYP----NWTQISLGKLLRYFANIEDDGEGLNSRIKSSV 282
+ V G PG KS + KV + N I+ G + A + + K SV
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSV 62
Query: 283 SAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPR------EMSQLIDFENKYQIHPP 336
+ D I ++ + + ID + L +
Sbjct: 63 EKQKKLQIDAAKGIA----EEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSV 118
Query: 337 MILIDCSKLVLHKGQ--------IDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDG 388
+ L++ ++ Q D S + F + T IV+
Sbjct: 119 IFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNV 178
Query: 389 DTQLPQVREEFERVLK 404
+ E R +K
Sbjct: 179 EGDPSIAANEIIRSMK 194
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 42.3 bits (98), Expect = 4e-05
Identities = 22/191 (11%), Positives = 55/191 (28%), Gaps = 16/191 (8%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGD 286
VV V G PG + Q D ++ + E E + + D
Sbjct: 3 VVVVTGVPGVGSTTSSQL-AMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMD 61
Query: 287 FVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPR------EMSQLIDFENKYQIHPPMILI 340
+ + + ++ + + + +D + L + +I++
Sbjct: 62 PETQKRIQKMAGRKIA--EMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVV 119
Query: 341 DCSKLVLHKGQ-------IDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLP 393
+ + + + D ++ + + + T + + + L
Sbjct: 120 ETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLD 179
Query: 394 QVREEFERVLK 404
Q EE VL+
Sbjct: 180 QAVEELTNVLR 190
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 37.8 bits (86), Expect = 0.001
Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 12/148 (8%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGD 286
++ +G PGS KS ++ + P + I+ + E+ E ++ K +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKK------E 57
Query: 287 FVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILI------ 340
+ + D + + + I E + K +
Sbjct: 58 GIVTGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWT 117
Query: 341 DCSKLVLHKGQIDNSVSAFRRRLELFRE 368
+ K +G + R + RE
Sbjct: 118 ELVKRNSKRGTKAVPIDVLRSMYKSMRE 145
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 38.0 bits (87), Expect = 0.001
Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 14/139 (10%)
Query: 28 VSEEVKDFSFLSSKTVTEVLMLEMKMSPAAKAFLISGYPRNMRDVVEYSDKIKTINGVIL 87
+ + ++ + V ++ + FL+ G+PR + + ++ V+
Sbjct: 49 AKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLE 108
Query: 88 IAWRQSLLERQIDYGAKLGHVILSLARMELANFYQNVTPVTDFFDQRGM-----LIAVNG 142
L+ +I + V R L ++Q P+ ++ + V+G
Sbjct: 109 FDVPDELIVDRIVKDDQEETV-----RKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDG 163
Query: 143 ERNPVEVYADFRTAVLKIL 161
+ EV AD + KIL
Sbjct: 164 TKPVAEVRAD----LEKIL 178
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 35.8 bits (81), Expect = 0.006
Identities = 24/188 (12%), Positives = 65/188 (34%), Gaps = 20/188 (10%)
Query: 221 ERNTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKS 280
E+ + + + G PG+ K+ M + + + + + +GKL++ + +
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKEN----------HFYTEY 50
Query: 281 SVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIH-PPMIL 339
+ + D + M+ + V+D E+ F +H +L
Sbjct: 51 DTELDTHIIEEKDEDRLLDFMEPIMVSR-GNHVVDYHSSELFPERWFHMVVVLHTSTEVL 109
Query: 340 ID-CSKLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREE 398
+ +K + + ++ A + + E + +V + L Q+
Sbjct: 110 FERLTKRQYSEAKRAENMEAEIQCICEEE-------ARDAYEDDIVLVRENDTLEQMAAT 162
Query: 399 FERVLKKI 406
E + +++
Sbjct: 163 VEEIRERV 170
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 34.7 bits (78), Expect = 0.012
Identities = 11/158 (6%), Positives = 36/158 (22%), Gaps = 1/158 (0%)
Query: 215 RKIKSVERNTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGL 274
+ I +++ LV+ + G S K+ + ++ Q +
Sbjct: 12 KTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHT 71
Query: 275 NSRIKSSVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIH 334
+ + + + + T + + + + I
Sbjct: 72 GNEEWFEYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIE 131
Query: 335 PPMILIDC-SKLVLHKGQIDNSVSAFRRRLELFRERTL 371
+ +D R ++ +
Sbjct: 132 GVFLQRKEWRPFFDFVVYLDCPREIRFARENDQVKQNI 169
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 32.3 bits (72), Expect = 0.091
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFA 265
V+ + G G+ K +C+ + + W + G + R A
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEAL-QWHLLDSGAIYRVLA 42
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 32.4 bits (73), Expect = 0.12
Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 16/213 (7%)
Query: 223 NTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSV 282
++ L V V G GS KS + + ++ +
Sbjct: 54 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFW- 112
Query: 283 SAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDC 342
D ++K K+ E D +I R ID +
Sbjct: 113 ---DLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVR 169
Query: 343 SKLVLHKGQIDNSVSAFRRR---LELFRERTLPMLRAMDV-ETRLTIVDGDTQLPQVREE 398
+K+ + + L+ R + R + E + ++ +
Sbjct: 170 TKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKN---VCHYD 226
Query: 399 FERVLKKIIDDLENTARPRDKRNHTALSLDNDN 431
F ++ K+I DL P KR++ +SL N
Sbjct: 227 FPVLMDKLISDL-----PIYKRHNFMVSLPNIT 254
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 31.8 bits (71), Expect = 0.12
Identities = 21/185 (11%), Positives = 60/185 (32%), Gaps = 21/185 (11%)
Query: 228 VWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGDF 287
+ + G PG K+ + +++ I++G L R + E +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS-GLKYINVGDLAREEQLYDGYDEEYD---------CPI 56
Query: 288 VNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLVL 347
++ D V+D + D D FP + ++
Sbjct: 57 LDEDRVVDE-LDNQMREGGVIVDYHGCDFFPERW---FHIVFVLRTDTNVLYERLETRGY 112
Query: 348 HKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKII 407
++ ++ +++ ++ E T + + + + ++ +++LK I
Sbjct: 113 NEKKLTDNIQCEIFQVLYE-EATASYKEEIVHQ-----LPSNK-PEELENNVDQILKWIE 165
Query: 408 DDLEN 412
+++
Sbjct: 166 QWIKD 170
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 30.8 bits (68), Expect = 0.27
Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 21/182 (11%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGD 286
+ ++G GS KS + +V +L F + + N +S +
Sbjct: 8 IYVLMGVSGSGKSAVASEVAH-----------QLHAAFLDGDFLHPRRNIEKMASGEPLN 56
Query: 287 FVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKL- 345
+R L + + T +++ ++ + + E + + D +
Sbjct: 57 DDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIE 116
Query: 346 --VLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVL 403
+ + + E +E ET + +VD D L V V+
Sbjct: 117 SRLKARKGHFFKTQMLVTQFETLQEPGAD-------ETDVLVVDIDQPLEGVVASTIEVI 169
Query: 404 KK 405
KK
Sbjct: 170 KK 171
>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo
sapiens) [TaxId: 9606]}
Length = 452
Score = 30.9 bits (69), Expect = 0.42
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 222 RNTPLVVWVVGGPGSS 237
N+P+V+W+ GGPG S
Sbjct: 46 ENSPVVLWLNGGPGCS 61
>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 421
Score = 30.5 bits (68), Expect = 0.49
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 222 RNTPLVVWVVGGPGSS 237
P+++W+ GGPG S
Sbjct: 42 AKDPVILWLNGGPGCS 57
>g1wht.1 c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat
(Triticum vulgare) [TaxId: 4565]}
Length = 409
Score = 30.1 bits (67), Expect = 0.67
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 222 RNTPLVVWVVGGPGSS 237
+ PLV+W+ GGPG S
Sbjct: 47 QPAPLVLWLNGGPGCS 62
>g1gxs.1 c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (Sorghum
bicolor) [TaxId: 4558]}
Length = 425
Score = 30.2 bits (67), Expect = 0.75
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 223 NTPLVVWVVGGPGSS 237
PLV+W+ GGPG S
Sbjct: 50 AAPLVLWLNGGPGCS 64
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 29.2 bits (64), Expect = 0.76
Identities = 20/190 (10%), Positives = 50/190 (26%), Gaps = 20/190 (10%)
Query: 224 TPLVVWVVGGPGSSKSEMCQKVLQDYPN-WTQISLGKLLR---YFANIEDDGEGLNSRIK 279
T ++ + GG + KS + + + P W + L+ + G ++
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGG 61
Query: 280 SSVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMIL 339
S+ + V A + D + + + F + +
Sbjct: 62 VSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLG-GAAAQERWRSFVGDLDVL--WVG 118
Query: 340 IDCSKLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETR--LTIVDGDTQLPQVRE 397
+ C V + R + + + + DT + E
Sbjct: 119 VRCDGAVAEGRE--------TARGDRVAGMAAKQAYVVHEGVEYDVEV---DTTHKESIE 167
Query: 398 EFERVLKKII 407
+ ++
Sbjct: 168 CAWAIAAHVV 177
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 29.4 bits (65), Expect = 0.79
Identities = 23/201 (11%), Positives = 56/201 (27%), Gaps = 26/201 (12%)
Query: 225 PLVVWVVGGPGSSKSEMCQK--------------VLQDYPNWTQISLGKLLRYFANIEDD 270
+V + GG GS KS + Q + +F
Sbjct: 3 RYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPAL-HAIADHFGANMIA 61
Query: 271 GEGLNSRIKSSVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENK 330
+G R L+ + + + + + + L+ +
Sbjct: 62 ADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSL 121
Query: 331 YQIHPPMILIDCSKLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRL----TIV 386
Y+ ++++D S + Q+ ++ E + + E RL ++
Sbjct: 122 YKKANRVLVVDVS----PETQLKRTMQRDDVTREHVEQI---LAAQATREARLAVADDVI 174
Query: 387 DGDTQLPQVREEFERVLKKII 407
D + + + R+ +
Sbjct: 175 DNNGAPDAIASDVARLHAHYL 195
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 29.6 bits (65), Expect = 0.79
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQDYPNWTQIS 256
P ++ +VG P K+ + +K L Y N+ +
Sbjct: 2 PTLIVMVGLPARGKTYISKK-LTRYLNFIGVP 32
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme,
C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 260
Score = 29.1 bits (63), Expect = 1.3
Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 181 VPETLPPQVQSIAAT--VHSPPKHFTRPNGVVSEPYRKIKSVERNTPLVVWVVGGPGSSK 238
+PE L +SIA + V +R V E P VV V GGP +
Sbjct: 1 LPEDLR---RSIAGSRLVWVESFDGSRVPTYVLES----GRAPTPGPTVVLVHGGPFAED 53
Query: 239 SEMCQKVLQDYPNWTQ 254
S+
Sbjct: 54 SDSWDTFAASLAAAGF 69
>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast
(Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}
Length = 483
Score = 29.4 bits (65), Expect = 1.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 223 NTPLVVWVVGGPGSS 237
+ PL++W+ GGPG S
Sbjct: 66 DRPLIIWLNGGPGCS 80
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.8 bits (63), Expect = 1.3
Identities = 8/51 (15%), Positives = 15/51 (29%)
Query: 360 RRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKIIDDL 410
+ RTL E + +D + E +K+ + L
Sbjct: 191 YKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL 241
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 29.0 bits (64), Expect = 1.3
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 218 KSVERNTPLVVWVVGGPGSSKSEMCQKVLQ 247
PL ++ G GS KS ++
Sbjct: 20 FETGNKCPLFIFFSGPQGSGKSFTSIQIYN 49
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 28.3 bits (62), Expect = 1.4
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 219 SVERNTPLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSR 277
S+ P VV VG PG+ KS Q+ L + ++ L + + L
Sbjct: 8 SLLSPNPEVVVAVGFPGAGKSTFIQEHLVS-AGYVHVNRDTLGSWQRCVSSCQAALRQG 65
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 28.2 bits (62), Expect = 1.7
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSA 284
L +W+ G S KS + ++ ++ Y + ++ GLN + S +
Sbjct: 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHA-----YRLDGDNIRFGLNKDLGFSEAD 78
Query: 285 GDFVNR 290
+ R
Sbjct: 79 RNENIR 84
>d2g7la2 a.121.1.1 (A:87-230) Putative transcriptional regulator
SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Length = 144
Score = 27.7 bits (61), Expect = 1.8
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 9/60 (15%)
Query: 357 SAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKIIDDLENTARP 416
SA R L E T P + + V G + +++ + T P
Sbjct: 91 SATVRALRDADEATHPAIASHMPLL----VAGSA-----HDRLRWSFDVLVNGITRTPVP 141
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation
factor SelB {Moorella thermoacetica [TaxId: 1525]}
Length = 60
Score = 25.8 bits (57), Expect = 2.3
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 355 SVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDT 390
++ R L R+ LP+L +D + + T GD
Sbjct: 20 GLAEARDALGSSRKYVLPLLEYLD-QVKFTRRVGDK 54
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.6 bits (60), Expect = 2.5
Identities = 20/186 (10%), Positives = 45/186 (24%), Gaps = 21/186 (11%)
Query: 227 VVWVVGGPGSSKSEMCQKVLQDYPNWTQISLGKLLRYFANIEDDGEGLNSRIKSSVSAGD 286
++ + G PGS KS + + + L + L +
Sbjct: 6 ILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDPWL-----PQSHQQN 60
Query: 287 FVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENKYQIHPPMILIDCSKLV 346
+ + D+ K+ + DG+V P + +
Sbjct: 61 RMIMQIAADVAGRYAKEGYFVILDGVV---RPDWLPAFTALARPLHYIVLRTTAAEAIER 117
Query: 347 LHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKI 406
D+ + L + G ++ L+
Sbjct: 118 CLDRGGDSLSDPLVVADLHSQFADLGAFEHHVLPV-----SGKD--------TDQALQSA 164
Query: 407 IDDLEN 412
I+ L++
Sbjct: 165 INALQS 170
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 27.7 bits (60), Expect = 2.6
Identities = 18/198 (9%), Positives = 44/198 (22%), Gaps = 11/198 (5%)
Query: 213 PYRKIKSVERNTPLVVWVVGGPGSSKS--EMCQKVLQDYPNWTQISLGKLLRYFANIEDD 270
PYR + + + + + + G + + +++ F E
Sbjct: 12 PYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERI 71
Query: 271 GEGLNSRIKSSVSAGDFVNRDVVLDIVYAEMKKTKYTEADGIVIDGFPREMSQLIDFENK 330
+ F + +G S ++
Sbjct: 72 DPTRFEQKSILAETAAFAA---FTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGI 128
Query: 331 YQ----IHPPMILIDCSKLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIV 386
+ + P +L L + A F + +L E I+
Sbjct: 129 VRLAALLRPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGAEVDARII 188
Query: 387 DGDTQLPQVREEFERVLK 404
+ + V +
Sbjct: 189 PSGHDIGD--PDAAIVRQ 204
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 27.7 bits (60), Expect = 3.3
Identities = 4/53 (7%), Positives = 21/53 (39%)
Query: 360 RRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKKIIDDLEN 412
+ +T + + + ++D + + + E +++++ ++N
Sbjct: 188 GQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKN 240
>d2fd5a2 a.121.1.1 (A:77-180) Probable transcriptional regulator
PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Length = 104
Score = 25.8 bits (57), Expect = 4.7
Identities = 5/27 (18%), Positives = 10/27 (37%)
Query: 393 PQVREEFERVLKKIIDDLENTARPRDK 419
RE R ++ ++ L + D
Sbjct: 42 EGFREVLSRHVEIMVTSLAESPEETDV 68
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima
[TaxId: 2336]}
Length = 295
Score = 27.0 bits (59), Expect = 5.8
Identities = 20/163 (12%), Positives = 46/163 (28%), Gaps = 25/163 (15%)
Query: 293 VLDIVYAEMKKTKY-------TEADGIV--IDGFPREMSQLIDFENKYQIHPPMILIDCS 343
+ ++Y+ ++ G+V +DG + ++ H PM L
Sbjct: 33 MNRVIYSG--QSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNP 90
Query: 344 KLVLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVL 403
K VL G TL + D + + + D + + ++ +
Sbjct: 91 KKVLIIG--------------GGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQT 136
Query: 404 KKIIDDLENTARPRDKRNHTALSLDNDNTVVHDLEGGAGEPVN 446
DD + + + + ++ D
Sbjct: 137 SCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGG 179
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia
virus type 2 [TaxId: 11909]}
Length = 137
Score = 26.0 bits (57), Expect = 6.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 157 VLKILNKNNVVPGSKPLVNGNAIPVPETLPPQVQSIAATVHSPPKH 202
++ IL KN V P + I P T PP + H PP +
Sbjct: 84 IINILVKNQVSPSAPAAPVPTPIC-PTTTPPPPPPPSPEAHVPPPY 128
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 26.5 bits (57), Expect = 6.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 225 PLVVWVVGGPGSSKSEMCQKVLQ 247
P ++ V GG S KS +C K++Q
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQ 24
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 26.6 bits (58), Expect = 7.3
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 222 RNTPLVVWVVGGPGSSKSEMCQKV 245
+ P ++ + G KS + +
Sbjct: 77 QRIPYIISIAGSVAVGKSTTARVL 100
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.5 bits (57), Expect = 7.4
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 223 NTPLVVWVVGGPGSSKSEMCQKVLQDYPNW 252
+P + G PGS K+ + + ++
Sbjct: 30 ESPTAFLLGGQPGSGKTSLRSAIFEETQGN 59
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 26.7 bits (58), Expect = 7.9
Identities = 19/159 (11%), Positives = 47/159 (29%), Gaps = 25/159 (15%)
Query: 295 DIVYAEMKKTKY-------TEADG--IVIDGFPREMSQLIDFENKYQIHPPMILIDCSKL 345
+++ +++Y ++ G +V+DG + + + + P+ +
Sbjct: 24 QLLHHR--RSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRK 81
Query: 346 VLHKGQIDNSVSAFRRRLELFRERTLPMLRAMDVETRLTIVDGDTQLPQVREEFERVLKK 405
VL G L + + + D + QV ++F +
Sbjct: 82 VLIIG--------------GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAI 127
Query: 406 IIDDLENTARPRDKRNHTALSLDNDNTVVHDLEGGAGEP 444
+ T D + D + ++ D G
Sbjct: 128 GYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPA 166
>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein
3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 25.6 bits (55), Expect = 9.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 449 NGFGPPRENRTVTTLFTKPQDPVAP 473
+ G P E TTL +P P P
Sbjct: 105 SIKGTPSEAEIFTTLSCEPDIPNPP 129
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.394
Gapped
Lambda K H
0.267 0.0504 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,943,675
Number of extensions: 93270
Number of successful extensions: 330
Number of sequences better than 10.0: 1
Number of HSP's gapped: 315
Number of HSP's successfully gapped: 60
Length of query: 520
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 431
Effective length of database: 1,185,626
Effective search space: 511004806
Effective search space used: 511004806
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.5 bits)