RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11032
(514 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 133 bits (337), Expect = 9e-37
Identities = 68/230 (29%), Positives = 98/230 (42%), Gaps = 48/230 (20%)
Query: 66 FIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKR 125
S + GE+ C C + HL +H R HTGE+P++C CGK F+ +
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 126 SNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSEL 185
+L H++ HTG KP ++CP CGK + R+ L
Sbjct: 63 KDLTRHQRT---HTGE------KP--------------------YKCPECGKSFSQRANL 93
Query: 186 NKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHL 245
H +TH+ +P+ C CG+ + HL H H G P+ C C KSF+++ L H
Sbjct: 94 RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ 153
Query: 246 TIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTH 295
H EK P ++CP CGK + R LN H +TH
Sbjct: 154 RTHTGEK-----------------P--YKCPECGKSFSRRDALNVHQRTH 184
Score = 132 bits (335), Expect = 2e-36
Identities = 66/259 (25%), Positives = 102/259 (39%), Gaps = 76/259 (29%)
Query: 97 KSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNI 156
S + GE+P+ C CGK F++ +L H++ HTG KP
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR---THTGE------KP------- 49
Query: 157 SFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 216
++CP CGK + + +L +H +TH+ +P+ C CG+ + + +L H
Sbjct: 50 -------------YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96
Query: 217 VGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECP 276
H G P+ C C KSF+Q L H H EK P ++CP
Sbjct: 97 QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK-----------------P--YKCP 137
Query: 277 TCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNK 336
CGK + L+ H +TH+ +P+ C CG K
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECG----------------------------K 169
Query: 337 SFTQKTGLERHLTIHNNEK 355
SF+++ L H H +K
Sbjct: 170 SFSRRDALNVHQRTHTGKK 188
Score = 132 bits (334), Expect = 3e-36
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 29/194 (14%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C CGK F H+ H+GE+ KC C + K L +H R HTGE+P++C C
Sbjct: 24 CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83
Query: 119 GKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKK 178
GK F++R+NL AH++ HTG KP + CP CGK
Sbjct: 84 GKSFSQRANLRAHQR---THTGE------KP--------------------YACPECGKS 114
Query: 179 WRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQK 238
+ + L H +TH+ +P+ C CG+ + + +L H H G P+ C C KSF+++
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 239 TGLERHLTIHNNEK 252
L H H +K
Sbjct: 175 DALNVHQRTHTGKK 188
Score = 130 bits (330), Expect = 9e-36
Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 56/239 (23%)
Query: 234 SFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTK 293
S + + EK P + CP CGK + L +H +
Sbjct: 2 SEFGSSSSVAQAALEPGEK-----------------P--YACPECGKSFSRSDHLAEHQR 42
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 353
TH+ +P+ C CG+ + K L H H G P+ C C KSF+Q+ L H H
Sbjct: 43 THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG 102
Query: 354 EKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKI 413
EK P + C CG+ F+ L H+
Sbjct: 103 EK-----------------------------------P-YACPECGKSFSQLAHLRAHQR 126
Query: 414 VHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
HTGE+ +KC CG++ + + L+ H HTGEKP++C CG F+++ + VH Q+ H
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH-QRTH 184
Score = 129 bits (328), Expect = 2e-35
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 55/239 (23%)
Query: 210 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGM 269
+ + + G P+ C C KSF++ L H H EK
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEK----------------- 48
Query: 270 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 329
P ++CP CGK + + +L +H +TH+ +P+ C CG+ + + +L H H G P+
Sbjct: 49 P--YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPY 106
Query: 330 TCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHS 389
C C KSF+Q L H H EK
Sbjct: 107 ACPECGKSFSQLAHLRAHQRTHTGEK---------------------------------- 132
Query: 390 TPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKP 448
P ++C CG+ F+ L H+ HTGE+ +KC CG++ + + LN H HTG+K
Sbjct: 133 -P-YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 121 bits (305), Expect = 3e-32
Identities = 64/238 (26%), Positives = 91/238 (38%), Gaps = 55/238 (23%)
Query: 182 RSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGL 241
S +P+ C CG+ + HL H H G P+ C C KSF+ K L
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 242 ERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPF 301
RH H EK P ++CP CGK + R+ L H +TH+ +P+
Sbjct: 66 TRHQRTHTGEK-----------------P--YKCPECGKSFSQRANLRAHQRTHTGEKPY 106
Query: 302 VCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGR 361
C CG+ + HL H H G P+ C C KSF+++ L H H EK
Sbjct: 107 ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK------ 160
Query: 362 RQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGER 419
P ++C CG+ F+ L H+ HTG++
Sbjct: 161 -----------------------------P-YKCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 54.4 bits (132), Expect = 8e-09
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERP 112
C CGK F + H+ H+GE+ KC C + + L H R HTG++
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 110 bits (278), Expect = 1e-28
Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 36/197 (18%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCE--VCSLALLSKSHLKQHMRVHTGERPHECE--V 117
CG + Q H H+GE+ C+ C S HL +H HTGE+ C+
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 118 CGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPT--C 175
C RF ++N+ H R + C C
Sbjct: 80 CDLRFTTKANMKKHFN---RFHNIKICV------------------------YVCHFENC 112
Query: 176 GKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNK 233
GK ++ ++L H +H+ P+ C E C + + + L H +H G C+
Sbjct: 113 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 172
Query: 234 SFTQKTGLERH-LTIHN 249
T +H H
Sbjct: 173 VGKTWTLYLKHVAECHQ 189
Score = 105 bits (265), Expect = 9e-27
Identities = 51/230 (22%), Positives = 78/230 (33%), Gaps = 60/230 (26%)
Query: 102 QHMRVHTGERPHECEV--CGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFL 159
+ + + C CG + K L AH K HTG KP
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK---HTGE------KP---------- 42
Query: 160 TGAREGMPLIHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCE--ICGQGYRTKTHLLV 215
C C K + + L +H+ TH+ + F C+ C + TK ++
Sbjct: 43 ----------FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92
Query: 216 HVGMHNG--IHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPL 271
H + I + CHF C K+F + L+ H H + P
Sbjct: 93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL-----------------P- 134
Query: 272 IHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 319
+EC C K++ S L +H K H+ + C +T T L H
Sbjct: 135 -YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183
Score = 103 bits (258), Expect = 1e-25
Identities = 51/236 (21%), Positives = 77/236 (32%), Gaps = 61/236 (25%)
Query: 75 HKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVHTGERPHECE--VCGKRFAKRSNLNA 130
K + + C C A L+ H+ HTGE+P C+ C K F +L
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 131 HKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHEC--PTCGKKWRTRSELNKH 188
H HTG K C C ++ T++ + KH
Sbjct: 63 HSL---THTGE------KN--------------------FTCDSDGCDLRFTTKANMKKH 93
Query: 189 TKTHSD--LRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLE 242
+ + +VC CG+ ++ L VH H P+ C C+K F+ + L+
Sbjct: 94 FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK 153
Query: 243 RHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTK-THSD 297
RH +H + C GK W + KH H D
Sbjct: 154 RHEKVHAGYPCKK----------------DDSCSFVGKTW---TLYLKHVAECHQD 190
Score = 102 bits (257), Expect = 1e-25
Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 48/210 (22%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE--ICGQGYRTKTHLLVHVGMHNGIHPFTC 331
CG + +L H H+ +PF C+ C +G+ + HL H H G FTC
Sbjct: 16 SFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 75
Query: 332 --HFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHS 389
C+ FT K +++H +N K
Sbjct: 76 DSDGCDLRFTTKANMKKHFNRFHNIKICV------------------------------- 104
Query: 390 TPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKC--DICGQALTTKPKLNDHMLLHTG 445
+ CH CG+ F L H+ HT + ++C + C + + +L H +H G
Sbjct: 105 ---YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161
Query: 446 ---EKPHECNVCGARFAKKWNMQVHKQKVH 472
+K C+ G + H + H
Sbjct: 162 YPCKKDDSCSFVGKTWT---LYLKHVAECH 188
Score = 92.7 bits (231), Expect = 5e-22
Identities = 48/238 (20%), Positives = 78/238 (32%), Gaps = 67/238 (28%)
Query: 216 HVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIH 273
+ + C F C ++ + L+ HL H EK P
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEK-----------------P--F 43
Query: 274 EC--PTCGKKWRTRSELNKHTKTHSDLRPFVCE--ICGQGYRTKTHLLVHVGMHNG--IH 327
C C K + + L +H+ TH+ + F C+ C + TK ++ H + I
Sbjct: 44 PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKIC 103
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
+ CHF C K+F + L+ H H +
Sbjct: 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQL------------------------------ 133
Query: 386 LFHSTPIFQCH--LCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHML 441
P ++C C + F+ P+ L +H+ VH G K D C T H+
Sbjct: 134 -----P-YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185
Score = 91.5 bits (228), Expect = 1e-21
Identities = 44/195 (22%), Positives = 61/195 (31%), Gaps = 49/195 (25%)
Query: 290 KHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLE 345
+ ++C CG Y L H+ H G PF C C K FT L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 346 RHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQC--HLCGRCFN 403
RH H EK F C C F
Sbjct: 62 RHSLTHTGEK-----------------------------------N-FTCDSDGCDLRFT 85
Query: 404 SPTTLTQHKIVHTGERR--FKCDI--CGQALTTKPKLNDHMLLHTGEKPHECN--VCGAR 457
+ + +H + + C CG+A +L H HT + P+EC C R
Sbjct: 86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR 145
Query: 458 FAKKWNMQVHKQKVH 472
F+ ++ H +KVH
Sbjct: 146 FSLPSRLKRH-EKVH 159
Score = 83.8 bits (208), Expect = 6e-19
Identities = 43/181 (23%), Positives = 64/181 (35%), Gaps = 31/181 (17%)
Query: 187 KHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLE 242
+ ++C CG Y L H+ H G PF C C K FT L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 243 RHLTIHNNEKKHQVSGRFSFNRAREGMPLIHEC--PTCGKKWRTRSELNKHTKTHSD--L 298
RH H EK C C ++ T++ + KH + +
Sbjct: 62 RHSLTHTGEK-----------------N--FTCDSDGCDLRFTTKANMKKHFNRFHNIKI 102
Query: 299 RPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERHLTIHNNE 354
+VC CG+ ++ L VH H P+ C C+K F+ + L+RH +H
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162
Query: 355 K 355
Sbjct: 163 P 163
Score = 74.9 bits (185), Expect = 7e-16
Identities = 36/142 (25%), Positives = 45/142 (31%), Gaps = 36/142 (25%)
Query: 60 DLCGKGFIHLKSYQIHKMIHSGERHI--KCEV--CSLALLSKSHLKQHMRVHTGERPHEC 115
D C F + + H + C C A + LK H HT + P+EC
Sbjct: 78 DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC 137
Query: 116 --EVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECP 173
E C KRF+ S L H+K H G P K C
Sbjct: 138 PHEGCDKRFSLPSRLKRHEKV---HAGY---PCKKD--------------------DSCS 171
Query: 174 TCGKKWRTRSELNKHTK-THSD 194
GK W + KH H D
Sbjct: 172 FVGKTW---TLYLKHVAECHQD 190
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 99.1 bits (248), Expect = 5e-25
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRH 138
SG ++C C LSK +LK H R HTGE+P EC CGK + ++ NL H+ + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 139 TGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+ C C + +R R EL H +H+ P+
Sbjct: 62 RSE------QV--------------------FTCSVCQETFRRRMELRLHMVSHTGEMPY 95
Query: 199 VCEICGQGYRTKTHLLVH 216
C C Q + K L H
Sbjct: 96 KCSSCSQQFMQKKDLQSH 113
Score = 93.0 bits (232), Expect = 7e-23
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 39/153 (25%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAE 382
+G C C+K F K L+ H H EK
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEK--------------------------- 34
Query: 383 EDNLFHSTPIFQCHLCGRCFNSPTTLTQH---KIVHTGERRFKCDICGQALTTKPKLNDH 439
P F+C CG+C+ L +H ++ E+ F C +C + + +L H
Sbjct: 35 --------P-FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH 85
Query: 440 MLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
M+ HTGE P++C+ C +F +K ++Q H K+H
Sbjct: 86 MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 89.1 bits (222), Expect = 2e-21
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 33/150 (22%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGM 166
+G EC C K+F + L H +K HTG KP
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRK---HTGE------KP----------------- 35
Query: 167 PLIHECPTCGKKWRTRSELNKH---TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGI 223
ECP CGK + + L +H + + F C +C + +R + L +H+ H G
Sbjct: 36 ---FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92
Query: 224 HPFTCHFCNKSFTQKTGLERH-LTIHNNEK 252
P+ C C++ F QK L+ H + +H+
Sbjct: 93 MPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 83.3 bits (207), Expect = 2e-19
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 33/139 (23%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMR---VHTGERPHEC 115
C C K F+ ++H H+GE+ +C C K +L +H ++ E+ C
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 116 EVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTC 175
VC + F +R L H HTG P ++C +C
Sbjct: 70 SVCQETFRRRMELRLHMVS---HTGE------MP--------------------YKCSSC 100
Query: 176 GKKWRTRSELNKH-TKTHS 193
+++ + +L H K HS
Sbjct: 101 SQQFMQKKDLQSHMIKLHS 119
Score = 82.9 bits (206), Expect = 2e-19
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 59 CDLCGKGFI---HLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
C CGK + +L ++ ++ E+ C VC + L+ HM HTGE P++C
Sbjct: 38 CPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC 97
Query: 116 EVCGKRFAKRSNLNAHKKKVTRHTG 140
C ++F ++ +L +H K+ H+G
Sbjct: 98 SSCSQQFMQKKDLQSHMIKL--HSG 120
Score = 82.6 bits (205), Expect = 3e-19
Identities = 38/153 (24%), Positives = 53/153 (34%), Gaps = 40/153 (26%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERH---LTIHNNEK 355
C C + + +K +L VH H G PF C C K + +K L H ++ +E+
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 356 KHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVH 415
F C +C F L H + H
Sbjct: 66 -----------------------------------V-FTCSVCQETFRRRMELRLHMVSH 89
Query: 416 TGERRFKCDICGQALTTKPKLNDHML-LHTGEK 447
TGE +KC C Q K L HM+ LH+G
Sbjct: 90 TGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 82.6 bits (205), Expect = 4e-19
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
+G C C+K F K L+ H H EK P ECP CG
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEK-----------------P--FECPKCG 42
Query: 280 KKWRTRSELNKH---TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNK 336
K + + L +H + + F C +C + +R + L +H+ H G P+ C C++
Sbjct: 43 KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ 102
Query: 337 SFTQKTGLERH-LTIHNNEK 355
F QK L+ H + +H+
Sbjct: 103 QFMQKKDLQSHMIKLHSGPS 122
Score = 50.6 bits (122), Expect = 5e-08
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHM-RVHTGER 111
C +C + F ++H + H+GE KC CS + K L+ HM ++H+G
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 94.2 bits (235), Expect = 6e-23
Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 44/180 (24%)
Query: 58 RCDLCGKGFI---HLKSYQIHKMIHSGERHIKCEVCSLALLSK-----SHLKQHMRVHTG 109
R D C + F L + + IH + C + + L HMR HTG
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 110 ERPHEC--EVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMP 167
E+PH+C E C K +++ NL H + HTG KP
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLR---SHTGE------KP------------------ 97
Query: 168 LIHEC--PTCGKKWRTRSELNKH-TKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNG 222
+ C C K + S+ KH +THS+ +P+VC++ C + Y + L HV +G
Sbjct: 98 --YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 79.6 bits (197), Expect = 7e-18
Identities = 41/197 (20%), Positives = 65/197 (32%), Gaps = 53/197 (26%)
Query: 110 ERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLI 169
E + C + F + L H H R K
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGER------KE-------------------- 34
Query: 170 HECPTCG-----KKWRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNG 222
C G + ++ + L H + H+ +P C C + Y +L H+ H G
Sbjct: 35 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94
Query: 223 IHPFTCHF--CNKSFTQKTGLERHLT-IHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
P+ C C+K+F+ + +H H+NEK P + + P C
Sbjct: 95 EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK-----------------PYVCKLPGCT 137
Query: 280 KKWRTRSELNKHTKTHS 296
K++ S L KH KT
Sbjct: 138 KRYTDPSSLRKHVKTVH 154
Score = 78.8 bits (195), Expect = 1e-17
Identities = 36/189 (19%), Positives = 63/189 (33%), Gaps = 52/189 (27%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVG---MHNGIHPFTCHFCN-----KSFTQKTGLERHLTI 350
+ C Q + ++ L+ H+ +H F CH+ + F + L H+
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 351 HNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHL--CGRCFNSPTTL 408
H EK P +C C + ++ L
Sbjct: 62 HTGEK-----------------------------------P-HKCTFEGCRKSYSRLENL 85
Query: 409 TQHKIVHTGERRFKC--DICGQALTTKPKLNDHML-LHTGEKPHECNV--CGARFAKKWN 463
H HTGE+ + C + C +A + H H+ EKP+ C + C R+ +
Sbjct: 86 KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSS 145
Query: 464 MQVHKQKVH 472
++ H K
Sbjct: 146 LRKH-VKTV 153
Score = 78.0 bits (193), Expect = 3e-17
Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 51/187 (27%)
Query: 274 ECPTCGKKWRTRSELNKHTKT---HSDLRPFVCEICGQGYRTKT-----HLLVHVGMHNG 325
C +++ ++ +L H + H + + FVC G + L+VH+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 326 IHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEE 383
P C F C KS+++ L+ HL H EK
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEK---------------------------- 96
Query: 384 DNLFHSTPIFQCH--LCGRCFNSPTTLTQHKI-VHTGERRFKCDI--CGQALTTKPKLND 438
P + C C + F++ + +H+ H+ E+ + C + C + T L
Sbjct: 97 -------P-YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148
Query: 439 HMLLHTG 445
H+ G
Sbjct: 149 HVKTVHG 155
Score = 77.6 bits (192), Expect = 3e-17
Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 54/192 (28%)
Query: 171 ECPTCGKKWRTRSELNKHTKT---HSDLRPFVCEICGQGYRTKT-----HLLVHVGMHNG 222
C +++ ++ +L H + H + + FVC G + L+VH+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 223 IHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGK 280
P C F C KS+++ L+ HL H EK P + E C K
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEK-----------------PYMCEHEGCSK 107
Query: 281 KWRTRSELNKH-TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFT 339
+ S+ KH +THS+ +P+VC++ G C K +T
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPG--------------------------CTKRYT 141
Query: 340 QKTGLERHLTIH 351
+ L +H+
Sbjct: 142 DPSSLRKHVKTV 153
Score = 68.4 bits (168), Expect = 6e-14
Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 60/203 (29%)
Query: 225 PFTCHFCNKSFTQKTGLERHLT---IHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKK 281
C++ F + L H+ IH K+ C +
Sbjct: 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG--------------GCSRELRP 48
Query: 282 WRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKS 337
++ + L H + H+ +P C C + Y +L H+ H G P+ C C+K+
Sbjct: 49 FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 338 FTQKTGLERHLT-IHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCH 396
F+ + +H H+NEK P + C
Sbjct: 109 FSNASDRAKHQNRTHSNEK-----------------------------------P-YVCK 132
Query: 397 L--CGRCFNSPTTLTQHKIVHTG 417
L C + + P++L +H G
Sbjct: 133 LPGCTKRYTDPSSLRKHVKTVHG 155
Score = 43.4 bits (103), Expect = 3e-05
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 418 ERRFKCDICGQALTTKPKLNDHML---LHTGEKPHECNVCGAR-----FAKKWNMQVHKQ 469
E + D C Q ++ +L H+ +H K C+ G F ++ + VH
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-M 59
Query: 470 KVH 472
+ H
Sbjct: 60 RRH 62
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 92.7 bits (231), Expect = 2e-22
Identities = 36/180 (20%), Positives = 53/180 (29%), Gaps = 42/180 (23%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH-------- 113
G +K K I + + C + L H+ + P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 114 -ECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHEC 172
EC GK F + L H + HTG KP C
Sbjct: 63 EECPREGKSFKAKYKLVNHIR---VHTGE------KP--------------------FPC 93
Query: 173 PT--CGKKWRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTC 228
P CGK + L H +TH+ +PF CE C + + + H+ +H
Sbjct: 94 PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 90.8 bits (226), Expect = 8e-22
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 203 CGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSF 262
G + L + C+++F+ L H+T+ + Q
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ------- 55
Query: 263 NRAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHV 320
+ ECP GK ++ + +L H + H+ +PF C CG+ + +L +H
Sbjct: 56 ---NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112
Query: 321 GMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEK 355
H G PF C F C++ F + ++H+ +H ++K
Sbjct: 113 RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 89.7 bits (223), Expect = 2e-21
Identities = 39/171 (22%), Positives = 57/171 (33%), Gaps = 32/171 (18%)
Query: 306 CGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKR 365
G + L + C+++F+ L H+T+ + Q+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN----- 57
Query: 366 NQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDI 425
H +C G+ F + L H VHTGE+ F C
Sbjct: 58 ----------------------HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF 95
Query: 426 --CGQALTTKPKLNDHMLLHTGEKPHECNV--CGARFAKKWNMQVHKQKVH 472
CG+ L H HTGEKP +C C RFA + + H VH
Sbjct: 96 PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH-MHVH 145
Score = 88.1 bits (219), Expect = 9e-21
Identities = 35/159 (22%), Positives = 52/159 (32%), Gaps = 42/159 (26%)
Query: 55 KYTRCDLCGKGFIHLKSYQIHKMIHSGE---------RHIKCEVCSLALLSKSHLKQHMR 105
C + F + H + +C + +K L H+R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 106 VHTGERPHECEV--CGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAR 163
VHTGE+P C CGK FA+ NL HK+ HTG KP
Sbjct: 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKRT---HTGE------KP-------------- 120
Query: 164 EGMPLIHECPT--CGKKWRTRSELNKHTKTHSDLRPFVC 200
+C C +++ S+ KH H+ +
Sbjct: 121 ------FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 85.4 bits (212), Expect = 8e-20
Identities = 39/188 (20%), Positives = 56/188 (29%), Gaps = 49/188 (26%)
Query: 278 CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHF---- 333
G + + + C + + T L+ HV M + P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 334 -----CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFH 388
KSF K L H+ +H EK
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEK--------------------------------- 89
Query: 389 STPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLHT 444
P F C CG+ F L HK HTGE+ FKC+ C + HM +HT
Sbjct: 90 --P-FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Query: 445 GEKPHECN 452
+K +
Sbjct: 147 SDKSGPSS 154
Score = 35.7 bits (83), Expect = 0.013
Identities = 5/48 (10%), Positives = 11/48 (22%)
Query: 426 CGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVHG 473
G + + + + C F+ + H H
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 50
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 89.4 bits (223), Expect = 4e-22
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C +CGK F + H +IHS R C+ C KS +K+H +HTGE+PH+C+VC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 119 GKRFAKRSNLNAHKKKVTRHTG 140
GK F++ SNL H +K HTG
Sbjct: 64 GKAFSQSSNLITHSRK---HTG 82
Score = 82.9 bits (206), Expect = 8e-20
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
F C +CG+ F +TL+ H ++H+ R + C CG+ K + H +HTGEKPH+C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 453 VCGARFAKKWNMQVHKQKVH 472
VCG F++ N+ H + H
Sbjct: 62 VCGKAFSQSSNLITH-SRKH 80
Score = 70.9 bits (175), Expect = 1e-15
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 29/107 (27%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVP 145
C++C + S L H+ +H+ RP+ C+ CGKRF ++S++ H HTG
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI---HTGE---- 55
Query: 146 SIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
KP H+C CGK + S L H++ H
Sbjct: 56 --KP--------------------HKCQVCGKAFSQSSNLITHSRKH 80
Score = 65.5 bits (161), Expect = 1e-13
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHF 230
+C CGK ++ S L+ H HSD RP+ C+ CG+ + K+ + H +H G P C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 231 CNKSFTQKTGLERHLTIH 248
C K+F+Q + L H H
Sbjct: 63 CGKAFSQSSNLITHSRKH 80
Score = 65.5 bits (161), Expect = 1e-13
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHF 333
+C CGK ++ S L+ H HSD RP+ C+ CG+ + K+ + H +H G P C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 334 CNKSFTQKTGLERHLTIH 351
C K+F+Q + L H H
Sbjct: 63 CGKAFSQSSNLITHSRKH 80
Score = 62.4 bits (153), Expect = 1e-12
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 36/117 (30%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFH 388
F C C KSF + + L HL IH++ +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTR--------------------------------- 28
Query: 389 STPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTG 445
P + C CG+ F+ + + +H +HTGE+ KC +CG+A + L H HTG
Sbjct: 29 --P-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 56.3 bits (137), Expect = 2e-10
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTR 285
F C C KSF + + L HL IH++ + P + C CGK++ +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTR-----------------P--YPCQYCGKRFHQK 42
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
S++ KHT H+ +P C++CG+ + ++L+ H H G
Sbjct: 43 SDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 55.9 bits (136), Expect = 2e-10
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 36/117 (30%)
Query: 301 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
F C+ICG+ ++ + L H+ +H+ P+ C +C K F QK+ +++H IH EK
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK----- 56
Query: 361 RRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTG 417
P +C +CG+ F+ + L H HTG
Sbjct: 57 ------------------------------P-HKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 55.5 bits (135), Expect = 3e-10
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 29/109 (26%)
Query: 114 ECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECP 173
+C++CGK F + S L+ H H+ +P + C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLI---HSDT------RP--------------------YPCQ 33
Query: 174 TCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
CGK++ +S++ KHT H+ +P C++CG+ + ++L+ H H G
Sbjct: 34 YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 54.4 bits (132), Expect = 7e-10
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 19/98 (19%)
Query: 198 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVS 257
F C+ICG+ ++ + L H+ +H+ P+ C +C K F QK+ +++H IH EK
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK----- 56
Query: 258 GRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTH 295
P H+C CGK + S L H++ H
Sbjct: 57 ------------P--HKCQVCGKAFSQSSNLITHSRKH 80
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 88.3 bits (220), Expect = 1e-21
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGE--RPHEC 115
C++CGK F + HK+ HSGE+ C VC L K + H+R H G +P+ C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 116 EVCGKRFAKRSNLNAHKKKVTRHTG 140
+ CGK F++ +LN H K+V H+G
Sbjct: 69 QSCGKGFSRPDHLNGHIKQV--HSG 91
Score = 82.2 bits (204), Expect = 2e-19
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGE--KPHE 450
C +CG+ F L +HK+ H+GE+ + C +CG K +++ H+ H G KP+
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 451 CNVCGARFAKKWNMQVHKQKVH 472
C CG F++ ++ H ++VH
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVH 89
Score = 79.1 bits (196), Expect = 2e-18
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 28/116 (24%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRH 138
SG + CE+C HL +H H+GE+P+ C VCG RF ++ ++ H + H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS---H 58
Query: 139 TGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTK-THS 193
G KP + C +CGK + LN H K HS
Sbjct: 59 DGSVG----KP--------------------YICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 68.3 bits (168), Expect = 1e-14
Identities = 27/128 (21%), Positives = 39/128 (30%), Gaps = 39/128 (30%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAE 382
+G C C K F L RH H+ EK
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEK--------------------------- 34
Query: 383 EDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERR--FKCDICGQALTTKPKLNDHM 440
P + C +CG F ++ H H G + C CG+ + LN H+
Sbjct: 35 --------P-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85
Query: 441 -LLHTGEK 447
+H+G
Sbjct: 86 KQVHSGPS 93
Score = 65.6 bits (161), Expect = 1e-13
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG--IHPFT 227
C CGK +R LN+H +HS +P+ C +CG ++ K + HV H+G P+
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 228 CHFCNKSFTQKTGLERHL-TIHNNEK 252
C C K F++ L H+ +H+
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 65.6 bits (161), Expect = 1e-13
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG--IHPFT 330
C CGK +R LN+H +HS +P+ C +CG ++ K + HV H+G P+
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 331 CHFCNKSFTQKTGLERHL-TIHNNEK 355
C C K F++ L H+ +H+
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 64.4 bits (158), Expect = 3e-13
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+G C+ICG+ LN H L H+GEKP+ C VCG RF +K M H + H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSH 58
Score = 61.0 bits (149), Expect = 6e-12
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
+G C C K F L RH H+ EK P + CP CG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEK-----------------P--YSCPVCG 42
Query: 280 KKWRTRSELNKHTKTHS--DLRPFVCEICGQGYRTKTHLLVH 319
+++ + ++ H ++H +P++C+ CG+G+ HL H
Sbjct: 43 LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84
Score = 60.2 bits (147), Expect = 1e-11
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 35/121 (28%)
Query: 300 PFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQS 359
CEICG+ +R HL H H+G P++C C F +K + H+ H
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH-------D 59
Query: 360 GRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQH-KIVHTGE 418
G K P + C CG+ F+ P L H K VH+G
Sbjct: 60 GSVGK--------------------------P-YICQSCGKGFSRPDHLNGHIKQVHSGP 92
Query: 419 R 419
Sbjct: 93 S 93
Score = 56.7 bits (138), Expect = 2e-10
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
Query: 197 PFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQV 256
CEICG+ +R HL H H+G P++C C F +K + H+ H+
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK-- 64
Query: 257 SGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTK-THS 296
P + C +CGK + LN H K HS
Sbjct: 65 -------------P--YICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 49.4 bits (119), Expect = 6e-08
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERH--IKCEVCSLALLSKSHLKQHM-RVHTGER 111
C +CG F H H G C+ C HL H+ +VH+G
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 27.8 bits (63), Expect = 2.8
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 52 EIAKYTRCDLCGKGFIHLKSYQIH-KMIHSGER 83
+ K C CGKGF H K +HSG
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 87.9 bits (219), Expect = 1e-21
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKR 121
C + F S H IH+G++ +C +C HL H+R HTGE+P C++CG++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 122 FAKRSNLNAHKKKVTRHTG 140
FA+ H K H
Sbjct: 72 FARSDERKRHTKI---HLR 87
Score = 76.7 bits (190), Expect = 1e-17
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 393 FQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHE 450
+ C + C R F+ +LT+H +HTG++ F+C IC + + L H+ HTGEKP
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 451 CNVCGARFAKKWNMQVHKQKVH 472
C++CG +FA+ + H K+H
Sbjct: 65 CDICGRKFARSDERKRH-TKIH 85
Score = 70.6 bits (174), Expect = 2e-15
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 38/122 (31%)
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
P+ C C++ F+Q L RH+ IH +K
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQK------------------------------ 33
Query: 386 LFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTG 445
P FQC +C R F+ LT H HTGE+ F CDICG+ + H +H
Sbjct: 34 -----P-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87
Query: 446 EK 447
+K
Sbjct: 88 QK 89
Score = 67.9 bits (167), Expect = 2e-14
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 170 HECPT--CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ CP C +++ L +H + H+ +PF C IC + + HL H+ H G PF
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 228 CHFCNKSFTQKTGLERHLTIHNNEK 252
C C + F + +RH IH +K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 67.9 bits (167), Expect = 2e-14
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 273 HECPT--CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ CP C +++ L +H + H+ +PF C IC + + HL H+ H G PF
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 331 CHFCNKSFTQKTGLERHLTIHNNEK 355
C C + F + +RH IH +K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 60.9 bits (149), Expect = 5e-12
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGER 111
+C +C + F H H+GE+ C++C K+H ++H ++
Sbjct: 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 88.3 bits (220), Expect = 2e-21
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C++CGK F + H H+G + KC+ C A S L +H+R+H+ ERP +C++C
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 119 GKRFAKRSNLNAHKKKVTRHTG 140
S L H + HTG
Sbjct: 71 PYASRNSSQLTVHLRS---HTG 89
Score = 84.0 bits (209), Expect = 4e-20
Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 29/122 (23%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRH 138
KCEVC K LK HMR HTG +P++C+ C A S+LN H + H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI---H 59
Query: 139 TGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+ +P +C C R S+L H ++H+
Sbjct: 60 SDE------RP--------------------FKCQICPYASRNSSQLTVHLRSHTGDSGP 93
Query: 199 VC 200
Sbjct: 94 SS 95
Score = 82.9 bits (206), Expect = 1e-19
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+C +CG+CF+ L H HTG + +KC C A LN H+ +H+ E+P +C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 453 VCGARFAKKWNMQVHKQKVH 472
+C + VH + H
Sbjct: 69 ICPYASRNSSQLTVH-LRSH 87
Score = 81.3 bits (202), Expect = 4e-19
Identities = 30/131 (22%), Positives = 44/131 (33%), Gaps = 36/131 (27%)
Query: 321 GMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTL 380
G P C C K F++K L+ H+ H K
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVK------------------------- 35
Query: 381 AEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHM 440
P ++C C ++L +H +H+ ER FKC IC A +L H+
Sbjct: 36 ----------P-YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL 84
Query: 441 LLHTGEKPHEC 451
HTG+
Sbjct: 85 RSHTGDSGPSS 95
Score = 77.1 bits (191), Expect = 1e-17
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 29/122 (23%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGM 166
PH+CEVCGK F+++ L H + HTG KP
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMR---CHTGV------KP----------------- 36
Query: 167 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 226
++C TC S LNKH + HSD RPF C+IC R + L VH+ H G
Sbjct: 37 ---YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP 93
Query: 227 TC 228
+
Sbjct: 94 SS 95
Score = 69.0 bits (170), Expect = 9e-15
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 36/130 (27%)
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 353
+ P CE+CG+ + K L H+ H G+ P+ C C+ + + L +HL IH++
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 354 EKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKI 413
E+ P F+C +C + + LT H
Sbjct: 62 ER-----------------------------------P-FKCQICPYASRNSSQLTVHLR 85
Query: 414 VHTGERRFKC 423
HTG+
Sbjct: 86 SHTGDSGPSS 95
Score = 67.8 bits (167), Expect = 2e-14
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
C C S H IHS ER KC++C A + S L H+R HTG+
Sbjct: 39 CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 66.3 bits (163), Expect = 7e-14
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 19/114 (16%)
Query: 218 GMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPT 277
G P C C K F++K L+ H+ H K P ++C T
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVK-----------------P--YKCKT 41
Query: 278 CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
C S LNKH + HSD RPF C+IC R + L VH+ H G +
Sbjct: 42 CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 65.9 bits (162), Expect = 1e-13
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
H+C CGK + + +L H + H+ ++P+ C+ C + L H+ +H+ PF C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 333 FCNKSFTQKTGLERHLTIHNNEKKHQSG 360
C + + L HL H + SG
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSSG 96
Score = 63.2 bits (155), Expect = 1e-12
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 19/113 (16%)
Query: 191 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 250
+ P CE+CG+ + K L H+ H G+ P+ C C+ + + L +HL IH++
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 251 EKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
E+ P +C C R S+L H ++H+
Sbjct: 62 ER-----------------P--FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 62.1 bits (152), Expect = 2e-12
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
KC++CG+ + K KL HM HTG KP++C C A ++ H ++H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIH 59
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 87.6 bits (218), Expect = 4e-21
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 33/135 (24%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVHTGERPHECEVCG 119
C K + L Q+H H+GE+ +C+ C LK+H R HTG +P +C+ C
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 120 KRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHEC--PTCGK 177
++F++ +L H + HTG KP C P+C K
Sbjct: 74 RKFSRSDHLKTHTR---THTGE------KP--------------------FSCRWPSCQK 104
Query: 178 KWRTRSELNKHTKTH 192
K+ EL +H H
Sbjct: 105 KFARSDELVRHHNMH 119
Score = 83.0 bits (206), Expect = 2e-19
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 35/147 (23%)
Query: 80 SGERHIKCE--VCSLALLSKSHLKQHMRVHTGERPHECEV--CGKRFAKRSNLNAHKKKV 135
S +R C C+ SHL+ H R HTGE+P++C+ C +RF++ L H++
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-- 59
Query: 136 TRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDL 195
RHTG KP +C TC +K+ L HT+TH+
Sbjct: 60 -RHTGV------KP--------------------FQCKTCQRKFSRSDHLKTHTRTHTGE 92
Query: 196 RPFVCEI--CGQGYRTKTHLLVHVGMH 220
+PF C C + + L+ H MH
Sbjct: 93 KPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 81.8 bits (203), Expect = 5e-19
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 58 RCDL--CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+CD C + F + H+ H+G + +C+ C HLK H R HTGE+P C
Sbjct: 38 QCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC 97
Query: 116 EV--CGKRFAKRSNLNAHKK 133
C K+FA+ L H
Sbjct: 98 RWPSCQKKFARSDELVRHHN 117
Score = 79.9 bits (198), Expect = 3e-18
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 35/147 (23%)
Query: 108 TGERPHECE--VCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREG 165
+ +RP C C KR+ K S+L H +K HTG KP
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK---HTGE------KP---------------- 36
Query: 166 MPLIHECPT--CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGI 223
++C C +++ +L +H + H+ ++PF C+ C + + HL H H G
Sbjct: 37 ----YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92
Query: 224 HPFTCHF--CNKSFTQKTGLERHLTIH 248
PF+C + C K F + L RH +H
Sbjct: 93 KPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 79.1 bits (196), Expect = 4e-18
Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 43/151 (28%)
Query: 328 PFTC--HFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
PF C CNK + + + L+ H H EK
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEK------------------------------ 35
Query: 386 LFHSTPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLH 443
P +QC C R F+ L +H+ HTG + F+C C + + L H H
Sbjct: 36 -----P-YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89
Query: 444 TGEKPHECNV--CGARFAKKWNMQVHKQKVH 472
TGEKP C C +FA+ + H +H
Sbjct: 90 TGEKPFSCRWPSCQKKFARSDELVRH-HNMH 119
Score = 74.1 bits (183), Expect = 3e-16
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 225 PFTC--HFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKW 282
PF C CNK + + + L+ H H EK P + C +++
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEK-----------------PYQCDFKDCERRF 48
Query: 283 RTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQ 340
+L +H + H+ ++PF C+ C + + HL H H G PF+C + C K F +
Sbjct: 49 SRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR 108
Query: 341 KTGLERHLTIH 351
L RH +H
Sbjct: 109 SDELVRHHNMH 119
Score = 69.1 bits (170), Expect = 1e-14
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 170 HEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHP 225
C P C K++ S L H++ H+ +P+ C+ C + + L H H G+ P
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTR 285
F C C + F++ L+ H H EK P P+C KK+
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEK-----------------PFSCRWPSCQKKFARS 109
Query: 286 SELNKHTKTH 295
EL +H H
Sbjct: 110 DELVRHHNMH 119
Score = 61.8 bits (151), Expect = 6e-12
Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 42/149 (28%)
Query: 273 HEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHP 328
C P C K++ S L H++ H+ +P+ C+ C + + L H H G+ P
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFH 388
F C C + F++ L+ H H EK
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEK--------------------------------- 93
Query: 389 STPIFQCHL--CGRCFNSPTTLTQHKIVH 415
P F C C + F L +H +H
Sbjct: 94 --P-FSCRWPSCQKKFARSDELVRHHNMH 119
Score = 49.8 bits (120), Expect = 9e-08
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 416 TGERRFKCD--ICGQALTTKPKLNDHMLLHTGEKPHECNV--CGARFAKKWNMQVHKQKV 471
+ +R F C C + L H HTGEKP++C+ C RF++ ++ H Q+
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRR 60
Query: 472 H 472
H
Sbjct: 61 H 61
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 87.1 bits (217), Expect = 5e-21
Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 36/140 (25%)
Query: 313 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQ 372
+ F C FC + FT+ L H H +E+
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDER----------------- 44
Query: 373 RSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTT 432
P + C +C + F L H+ +H+ E+ FKC CG+
Sbjct: 45 ------------------P-YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ 85
Query: 433 KPKLNDHMLLHTGEKPHECN 452
L H LH
Sbjct: 86 SRTLAVHKTLHMQTSSPTAA 105
Score = 87.1 bits (217), Expect = 5e-21
Identities = 31/132 (23%), Positives = 46/132 (34%), Gaps = 29/132 (21%)
Query: 97 KSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNI 156
S ++ C+ CG+ F K NL H++ HT +P
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER---THTDE------RP------- 45
Query: 157 SFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 216
+ C C K +R + L H HS +PF C+ CG+G+ L VH
Sbjct: 46 -------------YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Query: 217 VGMHNGIHPFTC 228
+H T
Sbjct: 93 KTLHMQTSSPTA 104
Score = 85.2 bits (212), Expect = 2e-20
Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 29/128 (22%)
Query: 73 QIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHK 132
++ ++ C+ C +L H R HT ERP+ C++C K F ++ +L H+
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65
Query: 133 KKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
H+ KP +C CGK + L H H
Sbjct: 66 Y---IHSKE------KP--------------------FKCQECGKGFCQSRTLAVHKTLH 96
Query: 193 SDLRPFVC 200
Sbjct: 97 MQTSSPTA 104
Score = 84.8 bits (211), Expect = 3e-20
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C CG+ F + IH+ H+ ER C++C A + HL+ H +H+ E+P +C+ C
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 119 GKRFAKRSNLNAHKKKVTRHTG 140
GK F + L HK H
Sbjct: 80 GKGFCQSRTLAVHKTL---HMQ 98
Score = 83.6 bits (208), Expect = 8e-20
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
F C CGR F L H+ HT ER + CDIC +A + L DH +H+ EKP +C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 453 VCGARFAKKWNMQVHKQKVH 472
CG F + + VH + +H
Sbjct: 78 ECGKGFCQSRTLAVH-KTLH 96
Score = 69.4 bits (171), Expect = 9e-15
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
C CG+ + L H +TH+D RP+ C+IC + +R + HL H +H+ PF C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 230 FCNKSFTQKTGLERHLTIHNNEK 252
C K F Q L H T+H
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQTS 100
Score = 69.4 bits (171), Expect = 9e-15
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
C CG+ + L H +TH+D RP+ C+IC + +R + HL H +H+ PF C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 333 FCNKSFTQKTGLERHLTIHNNEK 355
C K F Q L H T+H
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQTS 100
Score = 69.4 bits (171), Expect = 9e-15
Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 19/122 (15%)
Query: 210 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGM 269
+ F C FC + FT+ L H H +E+
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDER----------------- 44
Query: 270 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 329
P + C C K +R + L H HS +PF C+ CG+G+ L VH +H
Sbjct: 45 P--YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP 102
Query: 330 TC 331
T
Sbjct: 103 TA 104
Score = 69.0 bits (170), Expect = 1e-14
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 407 TLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQV 466
+ ++ ++ F C CG+ T L H HT E+P+ C++C F ++ +++
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 467 HKQKVH 472
H + +H
Sbjct: 64 H-RYIH 68
Score = 64.0 bits (157), Expect = 6e-13
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
CD+C K F + H+ IHS E+ KC+ C L H +H
Sbjct: 48 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 87.2 bits (217), Expect = 8e-21
Identities = 42/141 (29%), Positives = 56/141 (39%), Gaps = 34/141 (24%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEV--CG 119
C K F + + H H G R C C A + S LK+H VHTGE+P +C CG
Sbjct: 13 CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 120 KRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPT--CGK 177
KRF+ NL H + HTG +P + CP C K
Sbjct: 72 KRFSLDFNLRTHVRI---HTGD------RP--------------------YVCPFDGCNK 102
Query: 178 KWRTRSELNKHTKTHSDLRPF 198
K+ + L H TH+ +
Sbjct: 103 KFAQSTNLKSHILTHAKAKNN 123
Score = 81.8 bits (203), Expect = 7e-19
Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 43/158 (27%)
Query: 299 RPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 356
R C C + +R + + H+ H G C C K+F + + L+RH +H EK
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK- 61
Query: 357 HQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHL--CGRCFNSPTTLTQHKIV 414
P FQC CG+ F+ L H +
Sbjct: 62 ----------------------------------P-FQCTFEGCGKRFSLDFNLRTHVRI 86
Query: 415 HTGERRFKCDI--CGQALTTKPKLNDHMLLHTGEKPHE 450
HTG+R + C C + L H+L H K ++
Sbjct: 87 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 81.0 bits (201), Expect = 1e-18
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVHTGERPHEC 115
C CGK F+ + H+++H+GE+ +C C +L+ H+R+HTG+RP+ C
Sbjct: 36 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95
Query: 116 EV--CGKRFAKRSNLNAHKKKVTRHTG 140
C K+FA+ +NL +H H
Sbjct: 96 PFDGCNKKFAQSTNLKSHILT---HAK 119
Score = 77.2 bits (191), Expect = 2e-17
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 26/140 (18%)
Query: 225 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKW 282
C C K F + + +HL H + H C CGK +
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTHG-PR-----------------V--HVCAECGKAF 44
Query: 283 RTRSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSF 338
S+L +H H+ +PF C CG+ + +L HV +H G P+ C F CNK F
Sbjct: 45 VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104
Query: 339 TQKTGLERHLTIHNNEKKHQ 358
Q T L+ H+ H K +Q
Sbjct: 105 AQSTNLKSHILTHAKAKNNQ 124
Score = 76.4 bits (189), Expect = 5e-17
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 44/151 (29%)
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
C C K F + + +HL H +
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTHG-PR------------------------------ 33
Query: 386 LFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLH 443
C CG+ F + L +H++VHTGE+ F+C CG+ + L H+ +H
Sbjct: 34 -----V-HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87
Query: 444 TGEKPHECNV--CGARFAKKWNMQVHKQKVH 472
TG++P+ C C +FA+ N++ H H
Sbjct: 88 TGDRPYVCPFDGCNKKFAQSTNLKSH-ILTH 117
Score = 75.2 bits (186), Expect = 1e-16
Identities = 46/178 (25%), Positives = 63/178 (35%), Gaps = 60/178 (33%)
Query: 82 ERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHT 139
R I C + C+ S +++H+ H G R H C CGK F + S L H+ HT
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL---VHT 58
Query: 140 GRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPT--CGKKWRTRSELNKHTKTHSDLRP 197
G KP +C CGK++ L H + H+ RP
Sbjct: 59 GE------KP--------------------FQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 92
Query: 198 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQ 255
+VC G CNK F Q T L+ H+ H K +Q
Sbjct: 93 YVCPFDG--------------------------CNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 74.9 bits (185), Expect = 2e-16
Identities = 38/156 (24%), Positives = 53/156 (33%), Gaps = 43/156 (27%)
Query: 273 HECPT--CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
CP C K +R S + KH TH R VC CG+ + + L H +H G PF
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 331 CHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFH 388
C F C K F+ L H+ IH ++
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDR--------------------------------- 91
Query: 389 STPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFK 422
P + C C + F T L H + H + +
Sbjct: 92 --P-YVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 57.5 bits (140), Expect = 2e-10
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVHTGERPHE 114
CGK F + + H IH+G+R C C+ ++LK H+ H + ++
Sbjct: 70 CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 85.6 bits (213), Expect = 2e-20
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 32/136 (23%)
Query: 78 IHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTR 137
SG++ C+ C + KS +HM +H G RP+ C VCGK+F + +L H K
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK---I 59
Query: 138 HTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRP 197
HTG IKP +EC C K++ R ++H S +
Sbjct: 60 HTG------IKP--------------------YECNICAKRFMWRDSFHRH--VTSCTKS 91
Query: 198 FVCEICGQGYRTKTHL 213
+ Q +
Sbjct: 92 YEAAKAEQNTTEASGP 107
Score = 85.2 bits (212), Expect = 3e-20
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 32/138 (23%)
Query: 104 MRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAR 163
+G++ + C+ CGK F +S + H H G +P
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMS---MHLGL------RP-------------- 37
Query: 164 EGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGI 223
+ C CGKK++ + L H K H+ ++P+ C IC + + + H + +
Sbjct: 38 ------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCT 89
Query: 224 HPFTCHFCNKSFTQKTGL 241
+ ++ T+ +G
Sbjct: 90 KSYEAAKAEQNTTEASGP 107
Score = 84.0 bits (209), Expect = 6e-20
Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 31/125 (24%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKR 121
CGK F H H +H G R C VC K HL HM++HTG +P+EC +C KR
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 122 FAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRT 181
F R + + H + K +E +
Sbjct: 75 FMWRDSFHRHV-----TSCT------KS--------------------YEAAKAEQNTTE 103
Query: 182 RSELN 186
S +
Sbjct: 104 ASGPS 108
Score = 81.0 bits (201), Expect = 8e-19
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 39/139 (28%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAE 382
+G + C C KSFT K+ +RH+++H +
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR--------------------------- 36
Query: 383 EDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLL 442
P + C +CG+ F L H +HTG + ++C+IC + + + H+
Sbjct: 37 --------P-YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV-- 85
Query: 443 HTGEKPHECNVCGARFAKK 461
+ K +E +
Sbjct: 86 TSCTKSYEAAKAEQNTTEA 104
Score = 76.7 bits (190), Expect = 2e-17
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+ C CG+ F + +H +H G R + C +CG+ K L HM +HTG KP+ECN
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 453 VCGARFAKKWNMQVHKQKVH 472
+C RF W H + V
Sbjct: 70 ICAKRFM--WRDSFH-RHVT 86
Score = 74.0 bits (183), Expect = 2e-16
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
+G + C C KSFT K+ +RH+++H + P + C CG
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR-----------------P--YGCGVCG 44
Query: 280 KKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFT 339
KK++ + L H K H+ ++P+ C IC + + + H + + + ++ T
Sbjct: 45 KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTT 102
Query: 340 QKTGL 344
+ +G
Sbjct: 103 EASGP 107
Score = 72.9 bits (180), Expect = 6e-16
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C +CGK F H IH+G + +C +C+ + + H V + + +E
Sbjct: 40 CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97
Query: 119 GKRFAKRSNLNA 130
+ + S ++
Sbjct: 98 EQNTTEASGPSS 109
Score = 68.6 bits (169), Expect = 2e-14
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 39/145 (26%)
Query: 293 KTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHN 352
S + + C+ CG+ + K+ H+ MH G+ P+ C C K F K L H+ IH
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 353 NEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHK 412
K P ++C++C + F + +H
Sbjct: 62 GIK-----------------------------------P-YECNICAKRFMWRDSFHRH- 84
Query: 413 IVHTGERRFKCDICGQALTTKPKLN 437
V + + ++ Q T +
Sbjct: 85 -VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 64.0 bits (157), Expect = 8e-13
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 278 CGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKS 337
CGK + +S+ ++H H LRP+ C +CG+ ++ K HL+ H+ +H GI P+ C+ C K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 338 FTQKTGLERHLTIHNNEK 355
F + RH + + K
Sbjct: 75 FMWRDSFHRH--VTSCTK 90
Score = 61.7 bits (151), Expect = 4e-12
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 414 VHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+G++ + C CG++ T K + + HM +H G +P+ C VCG +F K ++ H K+H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH 60
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 84.5 bits (210), Expect = 2e-20
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEV 117
+C +C + F H H+GE+ C++C K+H + P +
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDK 63
Query: 118 CGKRFAKRSNLNAHKKKVTRHTG 140
+ +K +L ++ + G
Sbjct: 64 VEELLSKNYHLENEVARLKKLVG 86
Score = 73.7 bits (182), Expect = 2e-16
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
FQC +C R F+ LT H HTGE+ F CDICG+ + H + P +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62
Query: 453 VCGARFAKKWNMQVHKQ 469
+K ++++
Sbjct: 63 KVEELLSKNYHLENEVA 79
Score = 67.1 bits (165), Expect = 3e-14
Identities = 21/110 (19%), Positives = 32/110 (29%), Gaps = 33/110 (30%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVP 145
+C +C HL H+R HTGE+P C++CG++FA+ H+
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI---QH------ 55
Query: 146 SIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSEL---NKHTKTH 192
I P + L K
Sbjct: 56 -ILP--------------------ILEDKVEELLSKNYHLENEVARLKKL 84
Score = 60.2 bits (147), Expect = 9e-12
Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 40/123 (32%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLF 387
PF C C ++F++ L H+ H EK
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEK-------------------------------- 30
Query: 388 HSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLL---HT 444
P F C +CGR F +H+ + D + L+ L + +
Sbjct: 31 ---P-FACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLV 85
Query: 445 GEK 447
GE+
Sbjct: 86 GER 88
Score = 58.7 bits (143), Expect = 3e-11
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+C C + + L H +TH+ +PF C+ICG+ + H + I P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62
Query: 230 FCNKSFTQKTGLERHLT---IHNNEK 252
+ ++ LE + E+
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVGER 88
Score = 58.7 bits (143), Expect = 3e-11
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+C C + + L H +TH+ +PF C+ICG+ + H + I P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62
Query: 333 FCNKSFTQKTGLERHLT---IHNNEK 355
+ ++ LE + E+
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVGER 88
Score = 56.0 bits (136), Expect = 3e-10
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 31/114 (27%)
Query: 111 RPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIH 170
+P +C +C + F++ +L H + HTG KP
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRT---HTGE------KP--------------------F 32
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIH 224
C CG+K+ E +H P + + + HL V
Sbjct: 33 ACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA-RLKKL 84
Score = 54.8 bits (133), Expect = 7e-10
Identities = 22/125 (17%), Positives = 32/125 (25%), Gaps = 40/125 (32%)
Query: 298 LRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKH 357
++PF C IC + + HL H+ H G PF C C + F + +RH I +
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILP- 58
Query: 358 QSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKI---V 414
+ L
Sbjct: 59 -----------------------------------ILEDKVEELLSKNYHLENEVARLKK 83
Query: 415 HTGER 419
GER
Sbjct: 84 LVGER 88
Score = 51.0 bits (123), Expect = 2e-08
Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 23/104 (22%)
Query: 195 LRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKH 254
++PF C IC + + HL H+ H G PF C C + F + +RH I +
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILP- 58
Query: 255 QVSGRFSFNRAREGMPLIHECPTCGKKWRTRSEL---NKHTKTH 295
+ L K
Sbjct: 59 ------------------ILEDKVEELLSKNYHLENEVARLKKL 84
Score = 48.6 bits (117), Expect = 9e-08
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLK---QHMRVHTGER 111
CD+CG+ F + H+ I I + L HL+ ++ GER
Sbjct: 33 ACDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 78.3 bits (194), Expect = 3e-18
Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 25/106 (23%)
Query: 99 HLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISF 158
R HTGE+P+ C C K F ++ L+ H K R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK---RYHD--PNFVPAA--------- 47
Query: 159 LTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICG 204
C CGK + R+ + +H + E G
Sbjct: 48 -----------FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82
Score = 68.7 bits (169), Expect = 7e-15
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERR----FKCDICGQALTTKPKLNDHMLLHTGEKP 448
+ C C + F L H + F C CG+ T + + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 449 HECNVCGARF 458
E G
Sbjct: 76 VEGENSGPSS 85
Score = 67.2 bits (165), Expect = 3e-14
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHI----KCEVCSLALLSKSHLKQHMRVHTGERPHE 114
C C K F + +H + + C C ++ + +H G E
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77
Query: 115 CEVCGKRF 122
E G
Sbjct: 78 GENSGPSS 85
Score = 64.1 bits (157), Expect = 3e-13
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 71 SYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGE----RPHECEVCGKRFAKRS 126
S H+GE+ C C K L H + + C CGK F +R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 127 NLNAHKKKVTRHTG 140
+ H G
Sbjct: 62 TMARHADN---CAG 72
Score = 64.1 bits (157), Expect = 4e-13
Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 407 TLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGE----KPHECNVCGARFAKKW 462
+ HTGE+ + C C + K L+ H + C+ CG F ++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 463 NMQVHKQKVH 472
M H
Sbjct: 62 TMARH-ADNC 70
Score = 57.5 bits (140), Expect = 7e-11
Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 32/115 (27%)
Query: 315 HLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRS 374
H G P+ C C+K+F QK L+ H +++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN------------------- 42
Query: 375 ESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQA 429
F F C CG+ F T+ +H G + + G +
Sbjct: 43 ------------FVPAA-FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS 84
Score = 56.4 bits (137), Expect = 2e-10
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 15/96 (15%)
Query: 212 HLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPL 271
H G P+ C C+K+F QK L+ H +++ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-------------- 47
Query: 272 IHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICG 307
C CGK + R+ + +H + E G
Sbjct: 48 -FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82
Score = 55.2 bits (134), Expect = 4e-10
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 185 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIH----PFTCHFCNKSFTQKTG 240
+TH+ +P+ C C + +R K L +H ++ + F C C K+FT++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 241 LERHLTIHNNEK 252
+ RH
Sbjct: 63 MARHADNCAGPD 74
Score = 55.2 bits (134), Expect = 4e-10
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 288 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIH----PFTCHFCNKSFTQKTG 343
+TH+ +P+ C C + +R K L +H ++ + F C C K+FT++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 344 LERHLTIHNNEK 355
+ RH
Sbjct: 63 MARHADNCAGPD 74
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 273 HECPTCGKKWRTRSELNKHTKTH----SDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHP 328
+ C C K +R + L+ H K + FVC CG+ + + + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 329 FTCHFCNKSF 338
S
Sbjct: 76 VEGENSGPSS 85
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 75.6 bits (187), Expect = 2e-17
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 73 QIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHK 132
H + ++ KC+ C + K +L H VHTGE+P+ C +CG +F + +NL H
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65
Query: 133 KKVTRHTG 140
+ H+G
Sbjct: 66 RI---HSG 70
Score = 70.9 bits (175), Expect = 9e-16
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 408 LTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVH 467
H + ++ +KCD C + K L H +HTGEKP+ CN+CGA+F + N++ H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 468 KQKVH 472
++H
Sbjct: 65 -TRIH 68
Score = 66.3 bits (163), Expect = 4e-14
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 29/95 (30%)
Query: 98 SHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNIS 157
H H + ++P++C+ C F + NL +HK HTG KP
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV---HTGE------KP-------- 45
Query: 158 FLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
+ C CG ++ + L HT+ H
Sbjct: 46 ------------YRCNICGAQFNRPANLKTHTRIH 68
Score = 64.0 bits (157), Expect = 2e-13
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
++C C F L HK VHTGE+ ++C+ICG L H +H+GEKP+
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 60.9 bits (149), Expect = 4e-12
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
+CD C F + + HK +H+GE+ +C +C ++LK H R+H+GE+P+
Sbjct: 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 55.2 bits (134), Expect = 3e-10
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 183 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 242
+ H+ +P+ C+ C +R K +L H +H G P+ C+ C F + L+
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 243 RHLTIHNNEK 252
H IH+ EK
Sbjct: 63 THTRIHSGEK 72
Score = 55.2 bits (134), Expect = 3e-10
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 345
+ H+ +P+ C+ C +R K +L H +H G P+ C+ C F + L+
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 346 RHLTIHNNEK 355
H IH+ EK
Sbjct: 63 THTRIHSGEK 72
Score = 41.7 bits (99), Expect = 2e-05
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
++C C +R + L H H+ +P+ C ICG + +L H +H+G
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70
Score = 41.7 bits (99), Expect = 2e-05
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
++C C +R + L H H+ +P+ C ICG + +L H +H+G
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 75.2 bits (186), Expect = 3e-17
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRH 138
S KC CS + SK+ L+ H R+H +RP +C C + SNL+ H KK
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK---F 60
Query: 139 TG 140
G
Sbjct: 61 HG 62
Score = 65.2 bits (160), Expect = 9e-14
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 414 VHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+ KC C + ++K L H +H ++P +CN C + N+ H K
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60
Score = 61.4 bits (150), Expect = 2e-12
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
+C C +S L H+ +H +R FKC+ C L+ HM G+
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 191 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 250
+ S P C C +K L +H +H PF C++C+ Q + L +H+ +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 251 EKKHQVSG 258
+ SG
Sbjct: 63 DMSGPSSG 70
Score = 57.1 bits (139), Expect = 7e-11
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
C C + +IH+ IH +R KC CS S+L +HM+ G+
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 57.1 bits (139), Expect = 7e-11
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 353
+ S P C C +K L +H +H PF C++C+ Q + L +H+ +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 354 EKKHQS 359
+ S
Sbjct: 63 DMSGPS 68
Score = 54.8 bits (133), Expect = 4e-10
Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 29/88 (32%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGARE 164
+ P +C C + ++ L H++ H +P K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERI---HCTD------RPFK------------- 39
Query: 165 GMPLIHECPTCGKKWRTRSELNKHTKTH 192
C C + S L+KH K
Sbjct: 40 -------CNYCSFDTKQPSNLSKHMKKF 60
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 75.3 bits (186), Expect = 3e-17
Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 68 HLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGE--RPHECEVCGKRFAKR 125
S HSGE+ +C +C +K H+ E C C A++
Sbjct: 2 SSGS---SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58
Query: 126 SNLNAHKKKVTRHTG 140
S+L H +K H+
Sbjct: 59 SDLGVHLRKQ--HSY 71
Score = 71.0 bits (175), Expect = 9e-16
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 407 TLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGE--KPHECNVCGARFAKKWNM 464
+ H+GE+ ++C IC T + H+L E C C A+K ++
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 465 QVHKQKVH 472
VH +K H
Sbjct: 62 GVHLRKQH 69
Score = 68.3 bits (168), Expect = 1e-14
Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 27/94 (28%)
Query: 99 HLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISF 158
R H+GE+P+EC +C RF + + H + +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL---QKHTENVAK------------- 45
Query: 159 LTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
CP C +S+L H +
Sbjct: 46 -----------FHCPHCDTVIARKSDLGVHLRKQ 68
Score = 58.7 bits (143), Expect = 3e-11
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERR--FKCDICGQALTTKPKLNDHM-LLHTGEKPH 449
++C++C F T+ H + E F C C + K L H+ H+ P
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 57.5 bits (140), Expect = 5e-11
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERH--IKCEVCSLALLSKSHLKQHMR-VHTGERPH 113
C +C F + ++H + E C C + KS L H+R H+ P
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 57.5 bits (140), Expect = 6e-11
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 185 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG--IHPFTCHFCNKSFTQKTGLE 242
+THS +P+ C IC + + +H+ + + F C C+ +K+ L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 243 RHL-TIHNNEK 252
HL H+
Sbjct: 63 VHLRKQHSYSG 73
Score = 57.5 bits (140), Expect = 6e-11
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 288 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG--IHPFTCHFCNKSFTQKTGLE 345
+THS +P+ C IC + + +H+ + + F C C+ +K+ L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 346 RHL-TIHNNEK 355
HL H+
Sbjct: 63 VHLRKQHSYSG 73
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/106 (15%), Positives = 27/106 (25%), Gaps = 35/106 (33%)
Query: 315 HLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRS 374
H+G P+ C+ C+ FTQ ++ H+ + E
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV------------------ 43
Query: 375 ESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQH-KIVHTGER 419
F C C + L H + H+
Sbjct: 44 ----------------AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 46.4 bits (111), Expect = 5e-07
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 17/84 (20%)
Query: 212 HLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPL 271
H+G P+ C+ C+ FTQ ++ H+ + E +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK---------------- 45
Query: 272 IHECPTCGKKWRTRSELNKHTKTH 295
CP C +S+L H +
Sbjct: 46 -FHCPHCDTVIARKSDLGVHLRKQ 68
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 72.1 bits (178), Expect = 5e-16
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKK 134
+ R KC+ C + S L +H R HTGE+P++C+ CGK F +RS+L H +
Sbjct: 9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68
Query: 135 VTRHTG 140
HTG
Sbjct: 69 ---HTG 71
Score = 68.2 bits (168), Expect = 9e-15
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 407 TLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQV 466
+ + + RR+KCD CG++ + L+ H HTGEKP++C+ CG F ++ ++
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 467 HKQKVH 472
H +VH
Sbjct: 65 H-HRVH 69
Score = 63.2 bits (155), Expect = 5e-13
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 29/97 (29%)
Query: 96 SKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRN 155
S + R ++C+ CGK F+ S+L+ H++ HTG KP
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT---HTGE------KP------ 46
Query: 156 ISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
++C CGK + RS L H + H
Sbjct: 47 --------------YKCDECGKAFIQRSHLIGHHRVH 69
Score = 62.1 bits (152), Expect = 1e-12
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHE 450
++C CG+ F+ + L++H+ HTGE+ +KCD CG+A + L H +HTG P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76
Score = 59.4 bits (145), Expect = 1e-11
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHE 114
CD CGK F H H+ H+GE+ KC+ C A + +SHL H RVHTG P
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76
Score = 54.8 bits (133), Expect = 5e-10
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 183 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 242
+ + R + C+ CG+ + + L H H G P+ C C K+F Q++ L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 243 RHLTIHNNEK 252
H +H
Sbjct: 64 GHHRVHTGSG 73
Score = 54.8 bits (133), Expect = 5e-10
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 345
+ + R + C+ CG+ + + L H H G P+ C C K+F Q++ L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 346 RHLTIHNNEK 355
H +H
Sbjct: 64 GHHRVHTGSG 73
Score = 49.7 bits (120), Expect = 3e-08
Identities = 21/110 (19%), Positives = 29/110 (26%), Gaps = 36/110 (32%)
Query: 313 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQ 372
+ C C KSF+ + L +H H EK
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEK----------------- 45
Query: 373 RSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFK 422
P ++C CG+ F + L H VHTG
Sbjct: 46 ------------------P-YKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76
Score = 45.1 bits (108), Expect = 1e-06
Identities = 20/86 (23%), Positives = 28/86 (32%), Gaps = 19/86 (22%)
Query: 210 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGM 269
+ C C KSF+ + L +H H EK
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEK----------------- 45
Query: 270 PLIHECPTCGKKWRTRSELNKHTKTH 295
P ++C CGK + RS L H + H
Sbjct: 46 P--YKCDECGKAFIQRSHLIGHHRVH 69
Score = 40.9 bits (97), Expect = 4e-05
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 237 QKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTHS 296
R + ++C CGK + S+L+KH +TH+
Sbjct: 2 SSGSSGRSEWQQRERR-----------------R--YKCDECGKSFSHSSDLSKHRRTHT 42
Query: 297 DLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 329
+P+ C+ CG+ + ++HL+ H +H G P
Sbjct: 43 GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 39.7 bits (94), Expect = 9e-05
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 226
++C CGK + S+L+KH +TH+ +P+ C+ CG+ + ++HL+ H +H G P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 71.8 bits (177), Expect = 7e-16
Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 31/116 (26%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC--EVCGKRFAKRSNLNAHKKKVT 136
+ C SHLK H+R HTGE+P+ C + CG +FA+ L H +K
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-- 59
Query: 137 RHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTH 192
HTG +P +C C + + L H K H
Sbjct: 60 -HTG------HRP--------------------FQCQKCDRAFSRSDHLALHMKRH 88
Score = 69.5 bits (171), Expect = 5e-15
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECE 116
CGK + + H H+GE+ C + C L +H R HTG RP +C+
Sbjct: 10 YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69
Query: 117 VCGKRFAKRSNLNAHKK 133
C + F++ +L H K
Sbjct: 70 KCDRAFSRSDHLALHMK 86
Score = 63.3 bits (155), Expect = 7e-13
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 392 IFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLHTGEKPH 449
CG+ + + L H HTGE+ + CD CG +L H HTG +P
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 450 ECNVCGARFAKKWNMQVHKQKVH 472
+C C F++ ++ +H K H
Sbjct: 67 QCQKCDRAFSRSDHLALH-MKRH 88
Score = 61.0 bits (149), Expect = 5e-12
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 31/116 (26%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGM 166
T + CGK + K S+L AH + HTG KP
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR---THTGE------KP----------------- 35
Query: 167 PLIHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 220
+ C CG K+ EL +H + H+ RPF C+ C + + HL +H+ H
Sbjct: 36 ---YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 60.6 bits (148), Expect = 6e-12
Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 25/111 (22%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERH 244
K T TH CG+ Y +HL H+ H G P+ C C F + L RH
Sbjct: 1 KRTATH----TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56
Query: 245 LTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTH 295
H + +C C + + L H K H
Sbjct: 57 YRKHTGHRP-------------------FQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.5 bits (145), Expect = 2e-11
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
H C K++T+ + L+ HL H EK P + CG
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEK-----------------PYHCDWDGCG 44
Query: 280 KKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
K+ EL +H + H+ RPF C+ C + + HL +H+ H
Sbjct: 45 WKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 58.7 bits (143), Expect = 3e-11
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 169 IHECPTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPF 226
+ CGK + S L H +TH+ +P+ C + CG + L H H G PF
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 227 TCHFCNKSFTQKTGLERHLTIH 248
C C+++F++ L H+ H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88
Score = 58.7 bits (143), Expect = 3e-11
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 272 IHECPTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPF 329
+ CGK + S L H +TH+ +P+ C + CG + L H H G PF
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 330 TCHFCNKSFTQKTGLERHLTIH 351
C C+++F++ L H+ H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88
Score = 56.0 bits (136), Expect = 3e-10
Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 38/123 (30%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAE 382
H C K++T+ + L+ HL H EK
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEK--------------------------- 34
Query: 383 EDNLFHSTPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHM 440
P + C CG F LT+H HTG R F+C C +A + L HM
Sbjct: 35 --------P-YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85
Query: 441 LLH 443
H
Sbjct: 86 KRH 88
Score = 52.9 bits (128), Expect = 3e-09
Identities = 29/128 (22%), Positives = 36/128 (28%), Gaps = 42/128 (32%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERH 347
K T TH CG+ Y +HL H+ H G P+ C C F + L RH
Sbjct: 1 KRTATH----TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56
Query: 348 LTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTT 407
H + FQC C R F+
Sbjct: 57 YRKHTGHRP------------------------------------FQCQKCDRAFSRSDH 80
Query: 408 LTQHKIVH 415
L H H
Sbjct: 81 LALHMKRH 88
Score = 46.0 bits (110), Expect = 8e-07
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNV--CGARFAKKWNMQVHKQK 470
T CG+ T L H+ HTGEKP+ C+ CG +FA+ + H +K
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 71.0 bits (175), Expect = 8e-16
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKK 134
IHSGE+ C C A S L QH RVHTGE+P++C CGK F++ S L H++
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64
Query: 135 VTRHTG 140
HT
Sbjct: 65 ---HTS 67
Score = 66.7 bits (164), Expect = 3e-14
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 408 LTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVH 467
+ +H+GE+ + C CG+A + L H +HTGEKP++C CG F++ + H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 468 KQKVH 472
Q++H
Sbjct: 62 -QRIH 65
Score = 63.6 bits (156), Expect = 3e-13
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
+ C CG+ F+ + L QH+ VHTGE+ +KC CG+A + L +H +HT
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 59.0 bits (144), Expect = 1e-11
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 29/99 (29%)
Query: 100 LKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFL 159
+H+GE+P+ C CGK F++ S L H++ HTG KP
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV---HTGE------KP---------- 42
Query: 160 TGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPF 198
++C CGK + S L H + H+
Sbjct: 43 ----------YKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 56.7 bits (138), Expect = 9e-11
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
C CGK F H+ +H+GE+ KC C A S L H R+HT
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 55.9 bits (136), Expect = 2e-10
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 185 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERH 244
+ + HS +P+ C CG+ + + L+ H +H G P+ C C K+F+Q +GL H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 245 LTIHNNEK 252
IH +
Sbjct: 62 QRIHTSGP 69
Score = 55.9 bits (136), Expect = 2e-10
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 288 LNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERH 347
+ + HS +P+ C CG+ + + L+ H +H G P+ C C K+F+Q +GL H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 348 LTIHNNEK 355
IH +
Sbjct: 62 QRIHTSGP 69
Score = 43.6 bits (104), Expect = 4e-06
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 19/90 (21%)
Query: 240 GLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLR 299
G IH+ EK P + C CGK + S L +H + H+ +
Sbjct: 1 GSSGSSGIHSGEK-----------------P--YGCVECGKAFSRSSILVQHQRVHTGEK 41
Query: 300 PFVCEICGQGYRTKTHLLVHVGMHNGIHPF 329
P+ C CG+ + + L+ H +H
Sbjct: 42 PYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 42.1 bits (100), Expect = 1e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 226
+ C CGK + S L +H + H+ +P+ C CG+ + + L+ H +H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 71.4 bits (176), Expect = 8e-16
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 393 FQCHL--CGRCFNSPTTLTQHK-IVHTGERRFKCD--ICGQALTTKPKLNDHMLLHTGEK 447
C CGR F++ L HK H ++ F C CG++ K L +HM LH+ +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 448 PHECNVCGARF 458
+ C G
Sbjct: 68 DYICEFSGPSS 78
Score = 70.7 bits (174), Expect = 1e-15
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 62 CGKGFIHLKSYQIHKMI-HSGERHIKCE--VCSLALLSKSHLKQHMRVHTGERPHECEVC 118
CG+ F + + HK H ++ C C + K HLK+HM++H+ R + CE
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 119 GKRF 122
G
Sbjct: 75 GPSS 78
Score = 63.7 bits (156), Expect = 4e-13
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 32/102 (31%)
Query: 107 HTGERPHECEV--CGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGARE 164
+G C+ CG+ F+ R LN HKK +H + K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKK--YQHIHQ------KS--------------- 38
Query: 165 GMPLIHECP--TCGKKWRTRSELNKHTKTHSDLRPFVCEICG 204
CP CGK + + L +H K HSD R ++CE G
Sbjct: 39 -----FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG 75
Score = 56.0 bits (136), Expect = 2e-10
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 415 HTGERRFKCDI--CGQALTTKPKLNDHM-LLHTGEKPHECN--VCGARFAKKWNMQVHKQ 469
+G CD CG+ + + LN H H +K C CG F K +++ H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-M 60
Query: 470 KVH 472
K+H
Sbjct: 61 KLH 63
Score = 52.2 bits (126), Expect = 4e-09
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 171 ECPTCGKKWRTRSELNKHTK-THSDLRPFVCE--ICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ P CG+ + R LN H K H + F C CG+ + K HL H+ +H+ +
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70
Query: 228 CHFCNKSF 235
C F S
Sbjct: 71 CEFSGPSS 78
Score = 52.2 bits (126), Expect = 4e-09
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 274 ECPTCGKKWRTRSELNKHTK-THSDLRPFVCE--ICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ P CG+ + R LN H K H + F C CG+ + K HL H+ +H+ +
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70
Query: 331 CHFCNKSF 338
C F S
Sbjct: 71 CEFSGPSS 78
Score = 51.8 bits (125), Expect = 7e-09
Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 41/112 (36%)
Query: 323 HNGIHPFTCHF--CNKSFTQKTGLERHLTI-HNNEKKHQSGRRQKRNQQHDRQRSESDTT 379
+G C F C + F+ + L H H ++K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS----------------------- 38
Query: 380 LAEEDNLFHSTPIFQC--HLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQA 429
F C CG+ FN L +H +H+ R + C+ G +
Sbjct: 39 -------------FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS 77
Score = 50.6 bits (122), Expect = 2e-08
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 24/93 (25%)
Query: 220 HNGIHPFTCHF--CNKSFTQKTGLERHLTI-HNNEKKHQVSGRFSFNRAREGMPLIHECP 276
+G C F C + F+ + L H H ++K CP
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSF-------------------SCP 42
Query: 277 --TCGKKWRTRSELNKHTKTHSDLRPFVCEICG 307
CGK + + L +H K HSD R ++CE G
Sbjct: 43 EPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG 75
Score = 47.2 bits (113), Expect = 3e-07
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 299 RPFVCEI--CGQGYRTKTHLLVHV-GMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNN 353
C+ CG+ + + +L H H F+C C KSF K L+ H+ +H++
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 354 EK 355
+
Sbjct: 66 TR 67
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 70.5 bits (173), Expect = 2e-15
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHT---GERPHECEVCGKRFAKRSNLNAHKKKV 135
SG ++CE+C K+ L H R H CE CGKRF K ++ AH+ K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 136 TRHTGRDEVPSIKP 149
H P
Sbjct: 62 --HPALLLAPQESS 73
Score = 69.0 bits (169), Expect = 6e-15
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHT---GEKPHECNVCGARFAKKWNMQVHKQKV 471
+G +C+ICG K LN H H C CG RF K ++ H+ K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 472 HGPDVRGTTES 482
H + ES
Sbjct: 62 HPALLLAPQES 72
Score = 61.3 bits (149), Expect = 3e-12
Identities = 13/65 (20%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHT---GERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
QC +CG +L H+ H RF C+ CG+ + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 450 ECNVC 454
Sbjct: 68 APQES 72
Score = 60.1 bits (146), Expect = 7e-12
Identities = 17/66 (25%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMH---NGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
CEICG R K L H H F C FC K F + + H + +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 356 KHQSGR 361
Sbjct: 66 LLAPQE 71
Score = 59.7 bits (145), Expect = 9e-12
Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMH---NGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
CEICG R K L H H F C FC K F + + H + +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 253 KHQ 255
Sbjct: 66 LLA 68
Score = 58.2 bits (141), Expect = 3e-11
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 27/99 (27%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGM 166
+G +CE+CG ++++LN H++K H E +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRK---HA---ETVAALR----------------- 38
Query: 167 PLIHECPTCGKKWRTRSELNKHTKT-HSDLRPFVCEICG 204
C CGK++ + H H L E G
Sbjct: 39 ---FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 52.4 bits (126), Expect = 4e-09
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDL---RPFVCEICGQGYRTKTHLLVHVGMHNGIHPF 226
+C CG R ++ LN H + H++ F CE CG+ + + H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 227 TCH 229
Sbjct: 68 APQ 70
Score = 52.4 bits (126), Expect = 4e-09
Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 4/70 (5%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHS---GERHIKCEVCSLALLSKSHLKQHMRV-HTGERPH 113
+C++CG S H+ H+ CE C + H H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 114 ECEVCGKRFA 123
E G
Sbjct: 69 PQESSGPSSG 78
Score = 49.7 bits (119), Expect = 4e-08
Identities = 17/89 (19%), Positives = 22/89 (24%), Gaps = 17/89 (19%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCG 279
+G C C + QK L H H C CG
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR----------------FPCEFCG 45
Query: 280 KKWRTRSELNKHTKT-HSDLRPFVCEICG 307
K++ + H H L E G
Sbjct: 46 KRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 47.8 bits (114), Expect = 2e-07
Identities = 15/101 (14%), Positives = 21/101 (20%), Gaps = 33/101 (32%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAE 382
+G C C + QK L H H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR----------------------- 38
Query: 383 EDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F C CG+ F P ++ H+
Sbjct: 39 ----------FPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 69.4 bits (171), Expect = 2e-15
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
CEVC+ A + HLK+H R HT E+P+ C +C + F +R L H +K+ H+G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKI--HSG 56
Score = 56.3 bits (137), Expect = 1e-10
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 421 FKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
F C++C +A + L H HT EKP+ C +C F ++ + H QK+H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 52.1 bits (126), Expect = 3e-09
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHML-LHTGEK 447
F C +C R F L +H HT E+ + C +C +A T + L H +H+G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 50.2 bits (121), Expect = 1e-08
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEK 252
R FVCE+C + + + HL H H P+ C CN++FT++ L RH IH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 50.2 bits (121), Expect = 1e-08
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEK 355
R FVCE+C + + + HL H H P+ C CN++FT++ L RH IH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 49.4 bits (119), Expect = 2e-08
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHM-RVHTGE 110
C++C + F + + H H+ E+ C +C+ A + L +H ++H+G
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 40.9 bits (97), Expect = 3e-05
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 216
C C + + + L +H ++H++ +P+ C +C + + + L+ H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 40.9 bits (97), Expect = 3e-05
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 319
C C + + + L +H ++H++ +P+ C +C + + + L+ H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 39.4 bits (93), Expect = 9e-05
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 30/84 (35%)
Query: 111 RPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIH 170
R CEVC + FA++ +L H + HT KP +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS---HTNE------KP--------------------Y 31
Query: 171 ECPTCGKKWRTRSELNKHT-KTHS 193
C C + + R L +H K HS
Sbjct: 32 PCGLCNRAFTRRDLLIRHAQKIHS 55
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 70.3 bits (173), Expect = 3e-15
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECEVCG 119
C K + + H H+GE+ KC E C L +H R HTG +P +C VC
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 120 KRFAKRSNLNAHKKKVTRHT 139
+ F++ +L H K RH
Sbjct: 83 RSFSRSDHLALHMK---RHQ 99
Score = 61.1 bits (149), Expect = 6e-12
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 392 IFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLHTGEK 447
I C C + + + L H HTGE+ +KC C +L H HTG K
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74
Query: 448 PHECNVCGARFAKKWNMQVHKQKVH 472
P +C VC F++ ++ +H K H
Sbjct: 75 PFQCGVCNRSFSRSDHLALH-MKRH 98
Score = 58.8 bits (143), Expect = 3e-11
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 258 GRFSFNRAREGMPLIHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTK 313
G + IH C P C K + S L H +TH+ +P+ C E C +
Sbjct: 1 GSSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 314 THLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 353
L H H G PF C CN+SF++ L H+ H N
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 58.4 bits (142), Expect = 5e-11
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 169 IHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIH 224
IH C P C K + S L H +TH+ +P+ C E C + L H H G
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNN 250
PF C CN+SF++ L H+ H N
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 58.4 bits (142), Expect = 5e-11
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 35/127 (27%)
Query: 96 SKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRN 155
S + R+H + P C K + K S+L AH + HTG KP
Sbjct: 5 SSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLR---THTGE------KP------ 45
Query: 156 ISFLTGAREGMPLIHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHL 213
++C C ++ EL +H + H+ +PF C +C + + HL
Sbjct: 46 --------------YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL 91
Query: 214 LVHVGMH 220
+H+ H
Sbjct: 92 ALHMKRH 98
Score = 52.6 bits (127), Expect = 6e-09
Identities = 27/122 (22%), Positives = 37/122 (30%), Gaps = 40/122 (32%)
Query: 299 RPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNE 354
R C+ C + Y +HL H+ H G P+ C + C+ F + L RH H
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 355 KKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIV 414
K FQC +C R F+ L H
Sbjct: 74 KP------------------------------------FQCGVCNRSFSRSDHLALHMKR 97
Query: 415 HT 416
H
Sbjct: 98 HQ 99
Score = 51.9 bits (125), Expect = 1e-08
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 225 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKW 282
C + C K +T+ + L+ HL H EK P C ++
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEK-----------------PYKCTWEGCDWRF 57
Query: 283 RTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
EL +H + H+ +PF C +C + + HL +H+ H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 51.1 bits (123), Expect = 2e-08
Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 40/121 (33%)
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
C + C K +T+ + L+ HL H EK
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEK------------------------------ 44
Query: 386 LFHSTPIFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLH 443
P ++C C F LT+H HTG + F+C +C ++ + L HM H
Sbjct: 45 -----P-YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Query: 444 T 444
Sbjct: 99 Q 99
Score = 40.7 bits (96), Expect = 8e-05
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 402 FNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNV--CGARFA 459
S + + +H + C + T L H+ HTGEKP++C C RFA
Sbjct: 3 SGSSGPDLEKRRIHYCD----YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 460 KKWNMQVHKQK 470
+ + H +K
Sbjct: 59 RSDELTRHYRK 69
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 67.2 bits (165), Expect = 2e-14
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 76 KMIHSGERHIKCEVCSLALLSKSHLKQHMRV--HTGERPHECEVCGKRFAKRSNLNAHKK 133
+ GE +C+VCS S+ +H + + C C K F ++ N+ AH K
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 134 KVTR 137
+ +
Sbjct: 62 IIHK 65
Score = 58.3 bits (142), Expect = 2e-11
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHM--LLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GE ++C +C + T H K + C C F +K NM H + +H
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 473 G 473
Sbjct: 65 K 65
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 27/91 (29%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGARE 164
GE + C+VC + + SN H +K
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH-KRN------VKV--------------- 40
Query: 165 GMPLIHECPTCGKKWRTRSELNKHTKTHSDL 195
+ CP C K++ + + H K +
Sbjct: 41 -----YPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 54.5 bits (132), Expect = 4e-10
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 191 THSDLRPFVCEICGQGYRTKTHLLVH--VGMHNGIHPFTCHFCNKSFTQKTGLERHLTIH 248
T + C++C + Y ++ H + + C FC K FT+K + H+ I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 249 N 249
+
Sbjct: 64 H 64
Score = 54.5 bits (132), Expect = 4e-10
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVH--VGMHNGIHPFTCHFCNKSFTQKTGLERHLTIH 351
T + C++C + Y ++ H + + C FC K FT+K + H+ I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 352 N 352
+
Sbjct: 64 H 64
Score = 47.5 bits (114), Expect = 1e-07
Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 393 FQCHLCGRCFNSPTTLTQHK--IVHTGERRFKCDICGQALTTKPKLNDHMLLHTG 445
++C +C R + + +H + + C C + T K + H+ +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 44.5 bits (106), Expect = 2e-06
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 273 HECPTCGKKWRTRSELNKH--TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGI 326
+ C C + + S +H T +++ + C C + + K ++ HV + + I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 65.7 bits (161), Expect = 9e-14
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECEVCG 119
CGK F ++H+ H+ + +C E C S LK+H +VH G + + C
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 120 KRFAKRSNLNAHKKKV 135
+ H +
Sbjct: 69 FVGKTWTLYLKHVAEC 84
Score = 59.6 bits (145), Expect = 1e-11
Identities = 30/109 (27%), Positives = 36/109 (33%), Gaps = 32/109 (29%)
Query: 87 CEVCSLALLSKSHLKQHMRVHTGERPHEC--EVCGKRFAKRSNLNAHKKKVTRHTGRDEV 144
E C A + LK H HT + P+EC E C KRF+ S L H+K H G
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV---HAGY--- 59
Query: 145 PSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTK-TH 192
K C GK W + KH H
Sbjct: 60 ---PCKKD-----------------DSCSFVGKTW---TLYLKHVAECH 85
Score = 56.9 bits (138), Expect = 1e-10
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 392 IFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCD--ICGQALTTKPKLNDHMLLHTGEK 447
++ CH CG+ F L H+ HT + ++C C + + +L H +H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 448 PHECNVCGARFAKKWNMQVHKQKVH 472
+ + C H + H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 50.3 bits (121), Expect = 2e-08
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 169 IHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIH 224
++ C CGK ++ ++L H +H+ P+ C E C + + + L H +H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 225 PFTCHFCNKSFTQKTGLERH 244
C+ T +H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 50.3 bits (121), Expect = 2e-08
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 272 IHEC--PTCGKKWRTRSELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIH 327
++ C CGK ++ ++L H +H+ P+ C E C + + + L H +H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 328 PFTCHFCNKSFTQKTGLERH 347
C+ T +H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 49.9 bits (120), Expect = 3e-08
Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 23/99 (23%)
Query: 226 FTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHEC--PTCGKK 281
+ CHF C K+F + L+ H H + +EC C K+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQL-------------------PYECPHEGCDKR 42
Query: 282 WRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHV 320
+ S L +H K H+ + C +T T L HV
Sbjct: 43 FSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 49.5 bits (119), Expect = 4e-08
Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 31/106 (29%)
Query: 114 ECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHEC- 172
E CGK F K + L H+ HT P +EC
Sbjct: 5 HFENCGKAFKKHNQLKVHQFS---HTQ------QLP--------------------YECP 35
Query: 173 -PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHV 217
C K++ S L +H K H+ + C +T T L HV
Sbjct: 36 HEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 45.7 bits (109), Expect = 1e-06
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 40/116 (34%)
Query: 329 FTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNL 386
+ CHF C K+F + L+ H H +
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQL------------------------------- 30
Query: 387 FHSTPIFQCH--LCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHM 440
++C C + F+ P+ L +H+ VH G K D C T H+
Sbjct: 31 -----PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 42.2 bits (100), Expect = 2e-05
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 22/99 (22%)
Query: 200 CEICGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVS 257
E CG+ ++ L VH H P+ C C+K F+ + L+RH +H +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK-- 63
Query: 258 GRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTK-TH 295
+C +T + KH H
Sbjct: 64 -----------------DDSCSFVGKTWTLYLKHVAECH 85
Score = 39.9 bits (94), Expect = 1e-04
Identities = 19/111 (17%), Positives = 31/111 (27%), Gaps = 38/111 (34%)
Query: 303 CEICGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQSG 360
E CG+ ++ L VH H P+ C C+K F+ + L+RH +H
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC---- 61
Query: 361 RRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQH 411
+ C + T +H
Sbjct: 62 --------------------------------KKDDSCSFVGKTWTLYLKH 80
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 61.4 bits (150), Expect = 1e-12
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHM-RVHTGERPHECEVCGKRFA 123
S + C+ C HL H+ +VHT ERPH+C+V +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 55.3 bits (134), Expect = 2e-10
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHM-LLHTGEKPHECNVCGARFA 459
+ + + C CG+ + LN H+ +HT E+PH+C V + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 48.0 bits (115), Expect = 7e-08
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+ +P+ C+ CGK F++ +LN H K+V HT
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQV--HTS 38
Score = 47.6 bits (114), Expect = 1e-07
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 393 FQCHLCGRCFNSPTTLTQH-KIVHTGERRFKCDICGQALTT 432
+ C CG+ F+ P L H K VHT ER KC + ++
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 46.0 bits (110), Expect = 4e-07
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTCHFCNKSFTQ 237
+ S +P++C+ CG+G+ HL H+ +H P C +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 46.0 bits (110), Expect = 4e-07
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTCHFCNKSFTQ 340
+ S +P++C+ CG+G+ HL H+ +H P C +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 39.5 bits (93), Expect = 7e-05
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+ KP+ C CG F++ ++ H ++VH
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
Score = 36.4 bits (85), Expect = 8e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 170 HECPTCGKKWRTRSELNKHTK-THSDLRPFVCEICGQGYRT 209
+ C +CGK + LN H K H+ RP C++ G +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.4 bits (85), Expect = 8e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 273 HECPTCGKKWRTRSELNKHTK-THSDLRPFVCEICGQGYRT 312
+ C +CGK + LN H K H+ RP C++ G +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 34.9 bits (81), Expect = 0.003
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 20/66 (30%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEKKHQVSGRFSFNRAREGMPLIHE 274
+ P+ C C K F++ L H+ +H +E+ P H+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER-----------------P--HK 43
Query: 275 CPTCGK 280
C
Sbjct: 44 CQVWVS 49
Score = 34.9 bits (81), Expect = 0.003
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEK 355
+ P+ C C K F++ L H+ +H +E+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER 40
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 9e-11
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ FKCDICG++ + +LN H ++HT EKP +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 53.7 bits (130), Expect = 6e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC++C + +S L +H VHT E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 51.3 bits (124), Expect = 4e-09
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C++CGK F RS LN H HT
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV---HTA 37
Score = 40.6 bits (96), Expect = 3e-05
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C++CG F + + H VH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35
Score = 39.4 bits (93), Expect = 7e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCD 424
F+C +CG+ F + L +H +VHT E+
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C KSF ++ L RH +H EK
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C KSF ++ L RH +H EK
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 34.4 bits (80), Expect = 0.005
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C+ICG+ + ++ L H +H P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C+ICG+ + ++ L H +H P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 33.2 bits (77), Expect = 0.011
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
CD+CGK F H M+H+ E+
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.083
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + RS LN+H+ H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.083
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + RS LN+H+ H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 9e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C VC A + +HL QH+RVHT E
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 55.2 bits (134), Expect = 2e-10
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C++CG+A LN H+ +HT E +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C VCGK F ++LN H + HT
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV---HTQ 37
Score = 39.8 bits (94), Expect = 5e-05
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ CNVCG F ++ H +VH
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCD 424
+ C++CG+ F L QH VHT E
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P++C+ C K+F L +HL +H E
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P++C+ C K+F L +HL +H E
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C +CG+ + HL H+ +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C +CG+ + HL H+ +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 29.8 bits (68), Expect = 0.19
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C++CGK F+ H +H+ E
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 28.6 bits (65), Expect = 0.47
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + + LN+H + H+
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 28.6 bits (65), Expect = 0.47
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + + LN+H + H+
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 1e-10
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KCD+C ++ L H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C+VC K F S+L H++ HTG
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI---HTG 37
Score = 51.0 bits (123), Expect = 6e-09
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC+VC + S L H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 3e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C+VC F ++ VH Q++H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35
Score = 37.1 bits (87), Expect = 4e-04
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +C + F ++LT H+ +HTGE+
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.013
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C+KSF + L H IH EK
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C+KSF + L H IH EK
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
CD+C K F + S +H+ IH+GE+
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.082
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C++C + +R + L VH +H G P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.082
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C++C + +R + L VH +H G P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.93
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C C K +R S L H + H+ +P
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.93
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C C K +R S L H + H+ +P
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 3e-10
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ +KC CG+A LN+H +HTG +P +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 53.7 bits (130), Expect = 5e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
SGE+ KC C A +HL +H R+HTG RP
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 49.4 bits (119), Expect = 2e-08
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P++C CGK F + ++LN H++ HTG
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI---HTG 37
Score = 39.4 bits (93), Expect = 7e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F+ T L +H+ +HTG R
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 36.3 bits (85), Expect = 7e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP++C+ CG F + ++ H +++H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIH 35
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C C K+F + T L H IH +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C C K+F + T L H IH +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 33.2 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C CG+ + THL H +H G P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 33.2 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C CG+ + THL H +H G P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 28.2 bits (64), Expect = 0.70
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
+C CGK F H+ IH+G R
Sbjct: 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 27.1 bits (61), Expect = 1.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + + LN+H + H+ RP
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 27.1 bits (61), Expect = 1.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + + LN+H + H+ RP
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 3e-10
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC+VC A SHL QH VH+GERP
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 53.7 bits (130), Expect = 6e-10
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC +CG+A L H +H+GE+P +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 49.0 bits (118), Expect = 2e-08
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C+VCGK F S+L H H+G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV---HSG 37
Score = 40.2 bits (95), Expect = 4e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +CG+ F + L QH VH+GER
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 36.3 bits (85), Expect = 8e-04
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C VCG F ++ H VH
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVH 35
Score = 34.0 bits (79), Expect = 0.005
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F + L +H ++H+ E+
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F + L +H ++H+ E+
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C++CG+ +R +HL+ H +H+G P
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C++CG+ +R +HL+ H +H+G P
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 28.6 bits (65), Expect = 0.52
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C +CGK F H +HSGER
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 28.2 bits (64), Expect = 0.69
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK +R S L +H HS RP
Sbjct: 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 28.2 bits (64), Expect = 0.69
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK +R S L +H HS RP
Sbjct: 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 3e-10
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGER + C +CG+A T + L H +HTGEKP +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 3e-09
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GER C VC A +S+L +H ++HTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 51.0 bits (123), Expect = 5e-09
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGERP+ C VCGK F RSNL H+K HTG
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI---HTG 37
Score = 40.2 bits (95), Expect = 4e-05
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE+P+ C VCG F + N+ H QK+H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C +CG+ F + L +H+ +HTGE+
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 218 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+FT ++ L +H IH EK
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 321 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+FT ++ L +H IH EK
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + RP++C +CG+ + +++L+ H +H G P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.023
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + RP++C +CG+ + +++L+ H +H G P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ C CGK + RS L KH K H+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+ C CGK + RS L KH K H+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 3e-10
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+A L H ++HTGEKP +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C A + S+L H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 6e-09
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F SNL H+ HTG
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI---HTG 37
Score = 40.2 bits (95), Expect = 4e-05
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + + LT H+++HTGE+
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 7e-05
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F N+ H Q +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIH 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F + L H IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K+F + L H IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 31.3 bits (72), Expect = 0.056
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ +R ++L H +H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.056
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ +R ++L H +H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.077
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
+C+ CGK F + H++IH+GE+
Sbjct: 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.41
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK +R S L H H+ +P
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.41
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK +R S L H H+ +P
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 4e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGER ++C CG+A K L H +HTGEKP +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 2e-09
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GERH +C C A KS L H R+HTGE+P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 1e-08
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGER +EC CGK FA++S L H++ HTG
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI---HTG 37
Score = 39.8 bits (94), Expect = 4e-05
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE+ +EC+ CG FA+K + +H Q++H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMH-QRIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F +TL H+ +HTGE+
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C C K+F +K+ L H IH EK
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C C K+F +K+ L H IH EK
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 33.2 bits (77), Expect = 0.009
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + R + C CG+ + K+ L++H +H G P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.009
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + R + C CG+ + K+ L++H +H G P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.32
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + +S L H + H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.32
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + +S L H + H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 54.1 bits (131), Expect = 4e-10
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+R+KC+ CG+ + +L+ H +HTGEKP +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 2e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C S L QH ++HTGE+P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+ ++C CGK F++ S L+ H+K HTG
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI---HTG 37
Score = 38.7 bits (91), Expect = 1e-04
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEK ++CN CG F++ + H QK+H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F+ + L+QH+ +HTGE+
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C+ C K F++ + L +H IH EK
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C+ C K F++ + L +H IH EK
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ + + + C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.017
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ + + + C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.41
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+GE+
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + S+L++H K H+ +P
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + S+L++H K H+ +P
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 54.7 bits (132), Expect = 4e-10
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 75 HKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVHTGERPHECEV--CGKRFAKRSNLNA 130
++ S R C C SHLK H R HTGE+P C C +RFA+ L+
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 131 HKKK 134
H++
Sbjct: 68 HRRT 71
Score = 49.3 bits (118), Expect = 4e-08
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 182 RSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQ 237
S + S +R +C CG+ Y +HL H H G PF+C + C + F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 238 KTGLERHLTIH 248
L RH H
Sbjct: 62 SDELSRHRRTH 72
Score = 49.3 bits (118), Expect = 4e-08
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 285 RSELNKHTKTHSDLRPFVCEI--CGQGYRTKTHLLVHVGMHNGIHPFTCHF--CNKSFTQ 340
S + S +R +C CG+ Y +HL H H G PF+C + C + F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 341 KTGLERHLTIH 351
L RH H
Sbjct: 62 SDELSRHRRTH 72
Score = 46.6 bits (111), Expect = 4e-07
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 406 TTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLHTGEKPHECNV--CGARFAKK 461
+ + +I + R C CG+ L H HTGEKP C+ C RFA+
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 462 WNMQVHKQK 470
+ H++
Sbjct: 63 DELSRHRRT 71
Score = 45.8 bits (109), Expect = 8e-07
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 33/100 (33%)
Query: 97 KSHLKQHMRVHTGERPHECEV--CGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKR 154
S + R H C CGK + K S+L AH + HTG KP
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR---THTGE------KP----- 47
Query: 155 NISFLTGAREGMPLIHEC--PTCGKKWRTRSELNKHTKTH 192
C C +++ EL++H +TH
Sbjct: 48 ---------------FSCSWKGCERRFARSDELSRHRRTH 72
Score = 39.3 bits (92), Expect = 2e-04
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 23/90 (25%)
Query: 210 KTHLLVHVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRARE 267
+ + I C C K++ + + L+ H H EK
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS------------ 49
Query: 268 GMPLIHEC--PTCGKKWRTRSELNKHTKTH 295
C C +++ EL++H +TH
Sbjct: 50 -------CSWKGCERRFARSDELSRHRRTH 72
Score = 34.3 bits (79), Expect = 0.010
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Query: 313 KTHLLVHVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQ 358
+ + I C C K++ + + L+ H H EK
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS 49
Score = 31.6 bits (72), Expect = 0.084
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 392 IFQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDI--CGQALTTKPKLNDHMLLH 443
C CG+ + + L H HTGE+ F C C + +L+ H H
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.4 bits (69), Expect = 0.23
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEV--CSLALLSKSHLKQHMRVH 107
CGK + + H H+GE+ C C L +H R H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 4e-10
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ + CD CG+A +L H +HTGEKP +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ C+ C A + L +H R+HTGE+P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 3e-08
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P+ C+ CGK F + L H++ HTG
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI---HTG 37
Score = 37.5 bits (88), Expect = 3e-04
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP+ C+ CG F + H Q++H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F L +H+ +HTGE+
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C +C K+F L RH IH EK
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C +C K+F L RH IH EK
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+VC+ CG+ + L+ H +H G P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+VC+ CG+ + L+ H +H G P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
C CGK + +EL +H + H+ +P
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
C CGK + +EL +H + H+ +P
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 54.0 bits (131), Expect = 5e-10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C CG+A K L H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 3e-09
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C C A K++L QH R+HTGE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 2e-08
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C CGK FA+++NL H++ HTG
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI---HTG 37
Score = 38.6 bits (91), Expect = 1e-04
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ C CG FA+K N+ H Q++H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIH 35
Score = 37.5 bits (88), Expect = 4e-04
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F LTQH+ +HTGE+
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F QK L +H IH EK
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F QK L +H IH EK
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + K +L H +H G P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.024
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + K +L H +H G P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ C CGK + ++ L +H + H+ +P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+ C CGK + ++ L +H + H+ +P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 5e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
GE+ +KCD+CG+ + L H +HTGEKP +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 6e-10
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
GE+ KC+VC SHL+ H RVHTGE+P
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 2e-08
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+ ++C+VCGK F++ S+L H++ HTG
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV---HTG 37
Score = 40.2 bits (95), Expect = 4e-05
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEK ++C+VCG F++ ++Q H Q+VH
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +CG+ F+ + L H+ VHTGE+
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 8e-04
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C C K F+Q + L+ H +H EK
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 36.4 bits (85), Expect = 8e-04
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C C K F+Q + L+ H +H EK
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + C++CG+ + +HL H +H G P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + C++CG+ + +HL H +H G P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 2.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK++ S L H + H+ +P
Sbjct: 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 2.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK++ S L H + H+ +P
Sbjct: 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 6e-10
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ L+ H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 9e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C S+L +H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 4e-08
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F S L+ H++ HTG
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI---HTG 37
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + H Q++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35
Score = 37.9 bits (89), Expect = 2e-04
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L++H+ +HTGE+
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K F + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K F + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.029
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ + +P+ C CG+ +R ++L H +H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.029
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ + +P+ C CG+ +R ++L H +H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.33
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK +R S L++H + H+ +P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.33
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK +R S L++H + H+ +P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 7e-10
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GER FKC+ CG+ + L H+ LH+ EK +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 52.5 bits (127), Expect = 1e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGER KC C +SHL H+R+H+ E+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 47.9 bits (115), Expect = 7e-08
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GERP +C CGK F +RS+L H + H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR---LHSR 37
Score = 39.4 bits (93), Expect = 7e-05
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GE+P +CN CG F ++ ++ H ++H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLH 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C+ CG+ F + L H +H+ E+
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C+ C K F +++ L HL +H+ EK
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C+ C K F +++ L HL +H+ EK
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S RPF C CG+G+ ++HL H+ +H+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S RPF C CG+G+ ++HL H+ +H+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGKGF H +HS E+
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 28.3 bits (64), Expect = 0.55
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK + RS L H + HS +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 28.3 bits (64), Expect = 0.55
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK + RS L H + HS +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 7e-10
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG + F+C CG+A T K L+ H +HTGEKP +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 2e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+G +H +C C A KS L H ++HTGE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG + EC CGK F ++S L+ H+K HTG
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI---HTG 37
Score = 39.8 bits (94), Expect = 5e-05
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG K EC CG F +K + +H QK+H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIH 35
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F +TL+ H+ +HTGE+
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G F C C K+FT+K+ L H IH EK
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G F C C K+FT+K+ L H IH EK
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + F C CG+ + K+ L +H +H G P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.025
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + F C CG+ + K+ L +H +H G P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.30
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
EC CGK + +S L+ H K H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.30
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
EC CGK + +S L+ H K H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.69
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F + +H+ IH+GE+
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 7e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ F C CG+A + LN H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C C A L QH R+HTGE+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C CGK F+ LN H++ HTG
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI---HTG 37
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C CG F+ + H +++H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F C CG+ F+ L QH+ +HTGE+
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C K+F+ GL +H IH EK
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C K+F+ GL +H IH EK
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.034
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG+ + L H +H G P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.034
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG+ + L H +H G P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + LN+H + H+ +P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + LN+H + H+ +P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F H+ IH+GE+
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 7e-10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGER ++C CG+A K L+ H +H GEKP +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 51.4 bits (124), Expect = 3e-09
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GERH +C C A + KS L H R+H GE+P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 49.4 bits (119), Expect = 2e-08
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGER +EC CGK F ++S L+ H++ H G
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI---HRG 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE+ +EC+ CG F +K + +H Q++H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMH-QRIH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F +TL+ H+ +H GE+
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C C K+F QK+ L H IH EK
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C C K+F QK+ L H IH EK
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + R + C CG+ + K+ L +H +H G P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + R + C CG+ + K+ L +H +H G P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.36
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK FI + +H+ IH GE+
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + +S L+ H + H +P
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + +S L+ H + H +P
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 9e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
G++ FKC+ C + T L H +HTGEKP +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 3e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G++ KC C S L H R+HTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 2e-07
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
G++ +C C K F + S+L H++ HTG
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR---IHTG 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
G+K +CN C F + ++ VH Q++H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIH 35
Score = 37.1 bits (87), Expect = 5e-04
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C+ C + F ++LT H+ +HTGE+
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G F C+ C K+FTQ + L H IH EK
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G F C+ C K+FTQ + L H IH EK
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.029
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + F C C + + + L VH +H G P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.029
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + F C C + + + L VH +H G P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ C K F S +H+ IH+GE+
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 3.6
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C C K + S L H + H+ +P
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 3.6
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C C K + S L H + H+ +P
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 9e-10
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG + + C+ CG+A + L H ++HTGEKP +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+G + C C A S L H +HTGE+P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 3e-08
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG +P+ C CGK F+ S+L H+ HTG
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI---HTG 37
Score = 39.8 bits (94), Expect = 5e-05
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F+ ++LT H+++HTGE+
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 1e-04
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG KP+ CN CG F+ ++ H Q +H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIH 35
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G+ P+ C+ C K+F+ + L H IH EK
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G+ P+ C+ C K+F+ + L H IH EK
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 31.3 bits (72), Expect = 0.047
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F S H++IH+GE+
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.096
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + ++P++C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.096
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + ++P++C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.72
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + S L H H+ +P
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 0.72
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + S L H H+ +P
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 53.8 bits (130), Expect = 9e-10
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 70 KSYQIHKMIHSGERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSN 127
+ + R C E C L +H+R+HTG++P +C +C + F++ +
Sbjct: 5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 128 LNAHKKKVTRHT 139
L H + HT
Sbjct: 65 LTTHIR---THT 73
Score = 45.8 bits (109), Expect = 8e-07
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 33/100 (33%)
Query: 96 SKSHLKQHMRVHTGERPHEC--EVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRK 153
++L ++ RP+ C E C +RF++ L H + HTG KP
Sbjct: 5 PMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRI---HTG------QKP---- 49
Query: 154 RNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHS 193
+C C + + L H +TH+
Sbjct: 50 ----------------FQCRICMRNFSRSDHLTTHIRTHT 73
Score = 43.4 bits (103), Expect = 5e-06
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 414 VHTGERRFKCDI--CGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKV 471
V R + C + C + + +L H+ +HTG+KP +C +C F++ ++ H +
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-IRT 71
Query: 472 H 472
H
Sbjct: 72 H 72
Score = 42.3 bits (100), Expect = 1e-05
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 62 CGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHT 108
C + F H IH+G++ +C +C HL H+R HT
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 41.5 bits (98), Expect = 2e-05
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 393 FQCHL--CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHT 444
+ C + C R F+ LT+H +HTG++ F+C IC + + L H+ HT
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 40.8 bits (96), Expect = 4e-05
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 183 SELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTG 240
+ L + RP+ C E C + + L H+ +H G PF C C ++F++
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 241 LERHLTIH 248
L H+ H
Sbjct: 65 LTTHIRTH 72
Score = 40.8 bits (96), Expect = 4e-05
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 286 SELNKHTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTG 343
+ L + RP+ C E C + + L H+ +H G PF C C ++F++
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 344 LERHLTIH 351
L H+ H
Sbjct: 65 LTTHIRTH 72
Score = 38.1 bits (89), Expect = 4e-04
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 23/87 (26%)
Query: 212 HLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGM 269
+LL + + + P+ C C++ F++ L RH+ IH +K Q
Sbjct: 8 NLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ-------------- 51
Query: 270 PLIHECPTCGKKWRTRSELNKHTKTHS 296
C C + + L H +TH+
Sbjct: 52 -----CRICMRNFSRSDHLTTHIRTHT 73
Score = 36.9 bits (86), Expect = 0.001
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 173 PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 220
+C +++ EL +H + H+ +PF C IC + + HL H+ H
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 36.9 bits (86), Expect = 0.001
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 276 PTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
+C +++ EL +H + H+ +PF C IC + + HL H+ H
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 31.1 bits (71), Expect = 0.097
Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 40/104 (38%)
Query: 315 HLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQ 372
+LL + + + P+ C C++ F++ L RH+ IH +K
Sbjct: 8 NLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP---------------- 49
Query: 373 RSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHT 416
FQC +C R F+ LT H HT
Sbjct: 50 --------------------FQCRICMRNFSRSDHLTTHIRTHT 73
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 9e-10
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC CG+A T K L+ H HTGE+ +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 50.6 bits (122), Expect = 8e-09
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C A KS L H + HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 49.4 bits (119), Expect = 2e-08
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F ++S L+ H++ HTG
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS---HTG 37
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C+ CG F +K + +H Q+ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F + L H+ HTGER
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSG 258
G P+ C C K+FT+K+GL H H E+ S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+FT+K+GL H H E+
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + K+ L +H H G
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 33.6 bits (78), Expect = 0.007
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + K+ L +H H G
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 32.1 bits (74), Expect = 0.028
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F IH+ H+GERH
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK + +S L+ H ++H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK + +S L+ H ++H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 1e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ FKC+ CG+ T +L+ H +HTGEKP +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 3e-09
Identities = 17/41 (41%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ KCE C S L H RVHTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 3e-08
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P +CE CGKRF + S L++H++ HTG
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV---HTG 37
Score = 39.8 bits (94), Expect = 4e-05
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP +C CG RF + + H Q+VH
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F + L H+ VHTGE+
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.001
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C C K FTQ + L H +H EK
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 36.0 bits (84), Expect = 0.001
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C C K FTQ + L H +H EK
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +PF CE CG+ + + L H +H G P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +PF CE CG+ + + L H +H G P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK++ S+L+ H + H+ +P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK++ S+L+ H + H+ +P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 1e-09
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++CD+C +A + L H +H+GEKP +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 51.7 bits (125), Expect = 3e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C+VC A + L QH RVH+GE+P
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC+VC K F+ ++L H++ H+G
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV---HSG 37
Score = 39.0 bits (92), Expect = 9e-05
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC+VC F+ ++ H Q+VH
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +C + F+ +LTQH+ VH+GE+
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.016
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F+ L +H +H+ EK
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 32.9 bits (76), Expect = 0.016
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F+ L +H +H+ EK
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 29.4 bits (67), Expect = 0.22
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C++C + + L H +H+G P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.22
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C++C + + L H +H+G P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.31
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+EC C K + + L +H + HS +P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.31
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+EC C K + + L +H + HS +P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 1e-09
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
GE+ ++C CG++ + +L H + HT EKP +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 52.2 bits (126), Expect = 2e-09
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
GE+ +C C + L QH HT E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+P++C CGK F+ L H HT
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT---HTR 37
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+QC CG+ F+ LTQH I HT E+
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.1 bits (92), Expect = 9e-05
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEKP++C+ CG F+ + + H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C KSF+ L +H H EK
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C KSF+ L +H H EK
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 31.7 bits (73), Expect = 0.032
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ +P+ C CG+ + L H H P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 31.7 bits (73), Expect = 0.032
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ +P+ C CG+ + L H H P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 30.6 bits (70), Expect = 0.097
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F H + H+ E+
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 28.7 bits (65), Expect = 0.42
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK + L +H TH+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 28.7 bits (65), Expect = 0.42
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK + L +H TH+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 1e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KCE C SK +L H +VHTGERP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 52.9 bits (128), Expect = 1e-09
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ +K L+ H +HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++CE CGK + + NL+ H+K HTG
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV---HTG 37
Score = 40.6 bits (96), Expect = 3e-05
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C CG + K+N+ +H QKVH
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35
Score = 38.7 bits (91), Expect = 1e-04
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ +NS L H+ VHTGER
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K + K L+ H +H E+
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K + K L+ H +H E+
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 33.7 bits (78), Expect = 0.006
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ + +P+ CE CG+GY +K +L +H +H G P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 33.7 bits (78), Expect = 0.006
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ + +P+ CE CG+GY +K +L +H +H G P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 28.3 bits (64), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK + ++ L+ H K H+ RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 28.3 bits (64), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK + ++ L+ H K H+ RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 1e-09
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+ E+ +KC+ CG+ + L+ H +H GEK +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 52.9 bits (128), Expect = 1e-09
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
S E+ KCE C + +L H RVH GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 51.0 bits (123), Expect = 6e-09
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+ E+P++CE CGK + +R NL+ H++ H G
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV---HMG 37
Score = 40.6 bits (96), Expect = 2e-05
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+ EKP++C CG + ++ N+ +H Q+VH
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35
Score = 38.2 bits (90), Expect = 2e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ +N L H+ VH GE+
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+ P+ C C K + ++ L+ H +H EK
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+ P+ C C K + ++ L+ H +H EK
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ CE CG+GY + +L +H +H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ CE CG+GY + +L +H +H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 32.1 bits (74), Expect = 0.023
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGKG+ + +H+ +H GE+
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 28.2 bits (64), Expect = 0.55
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK + R L+ H + H +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 28.2 bits (64), Expect = 0.55
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK + R L+ H + H +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 1e-09
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ F+C+ CG+ T L+ H +HTGEKP +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ +CE C SHL H RVHTGE+P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P +CE CGKRF + S+L++H++ HTG
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV---HTG 37
Score = 39.1 bits (92), Expect = 9e-05
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP +C CG RF + ++ H Q+VH
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVH 35
Score = 36.8 bits (86), Expect = 5e-04
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
FQC CG+ F + L H+ VHTGE+
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 9e-04
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C C K FTQ + L H +H EK
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 36.4 bits (85), Expect = 9e-04
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C C K FTQ + L H +H EK
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 34.1 bits (79), Expect = 0.005
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ S +PF CE CG+ + +HL H +H G P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 34.1 bits (79), Expect = 0.005
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ S +PF CE CG+ + +HL H +H G P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK++ S L+ H + H+ +P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK++ S L+ H + H+ +P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 52.5 bits (127), Expect = 1e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG+R ++C CG+A TK L H HTGEKP +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 8e-09
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG+RP+EC CGK F +S+L H++ HTG
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS---HTG 37
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G+R +C C A +KS L H R HTGE+P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 4e-05
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG++P+EC CG F K ++ H ++ H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35
Score = 36.4 bits (85), Expect = 8e-04
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F + ++L H+ HTGE+
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.006
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + RP+ C CG+ ++TK+ L+ H H G P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.006
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + RP+ C CG+ ++TK+ L+ H H G P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F K+ L H H EK
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F K+ L H H EK
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 30.6 bits (70), Expect = 0.088
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK ++T+S L H ++H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.088
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK ++T+S L H ++H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.14
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F S H+ H+GE+
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 1e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ FKC CG+A L H+ +HTGEKP +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 1e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
SGE+ KC+ C A HL H+R+HTGE+P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P +C+ CGK F + +L +H + HTG
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI---HTG 37
Score = 38.6 bits (91), Expect = 1e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F L H +HTGE+
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 5e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP +C CG F + ++ H ++H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C C K+F Q L HL IH EK
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C C K+F Q L HL IH EK
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ S +PF C+ CG+ +R HL H+ +H G P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ S +PF C+ CG+ +R HL H+ +H G P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 27.8 bits (63), Expect = 0.79
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F H IH+GE+
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.0
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK +R L H + H+ +P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.0
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK +R L H + H+ +P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.6 bits (127), Expect = 1e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC CG+A H LHTG++P +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 51.8 bits (125), Expect = 3e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C A S QH R+HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 47.2 bits (113), Expect = 1e-07
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F S+ H++ HTG
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F ++ TQH+ +HTG+R
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 36.8 bits (86), Expect = 6e-04
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C CG F + H Q++H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35
Score = 32.9 bits (76), Expect = 0.014
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F + +H +H ++
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 32.9 bits (76), Expect = 0.014
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F + +H +H ++
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 30.2 bits (69), Expect = 0.12
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + + H +H G P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + + H +H G P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 28.7 bits (65), Expect = 0.43
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + S +H + H+ RP
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 28.7 bits (65), Expect = 0.43
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + S +H + H+ RP
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C+ CG+A + + L H +HTG+KP +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 49.5 bits (119), Expect = 2e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C C A +S L H +HTG++P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 49.1 bits (118), Expect = 2e-08
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC CGK F+ RS+L H+ HTG
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI---HTG 37
Score = 39.4 bits (93), Expect = 7e-05
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ECN CG F+ + ++ H Q +H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F+ ++LT H+ +HTG++
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 33.3 bits (77), Expect = 0.011
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F+ ++ L H IH +K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 33.3 bits (77), Expect = 0.011
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K+F+ ++ L H IH +K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 30.6 bits (70), Expect = 0.078
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + ++ L H +H G P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 30.6 bits (70), Expect = 0.078
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + ++ L H +H G P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 29.8 bits (68), Expect = 0.15
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F S H+ IH+G++
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 29.0 bits (66), Expect = 0.35
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+EC CGK + RS L H H+ +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 29.0 bits (66), Expect = 0.35
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+EC CGK + RS L H H+ +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGER C C SHL +H++ H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 50.2 bits (121), Expect = 1e-08
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GER + C+ CG+ L +H+ H EK +
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GERP+ C CGK F + S+L H K RH
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK---RHFR 37
Score = 38.3 bits (90), Expect = 1e-04
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F + L +H H E+
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GE+P+ CN CG F + ++ H K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C+ C K+F + + L HL H EK
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C+ C K+F + + L HL H EK
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S RP+ C CG+ + +HL+ H+ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S RP+ C CG+ + +HL+ H+ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.9 bits (71), Expect = 0.065
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
C CGK + S L +H K H +
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.9 bits (71), Expect = 0.065
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
C CGK + S L +H K H +
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 29.8 bits (68), Expect = 0.17
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGK F H H E+
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C C + + KSHL +H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 2e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C+ CG++ K LN H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 6e-08
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C CGK F ++S+LN H++ HTG
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI---HTG 37
Score = 39.0 bits (92), Expect = 1e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ CN CG F +K ++ H +++H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C KSF QK+ L RH IH EK
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C KSF QK+ L RH IH EK
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F + L +H+ +HTGE+
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P++C CG+ + K+HL H +H G P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P++C CG+ + K+HL H +H G P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.22
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK FI H+ IH+GE+
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.46
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + +S LN+H + H+ +P
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.46
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + +S LN+H + H+ +P
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C SHL +H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 2e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC CG+ L H L+HTGEKP +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F + S+L H+ HTG
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI---HTG 37
Score = 38.2 bits (90), Expect = 2e-04
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++CH CG+ F + L +H+++HTGE+
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 2e-04
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C+ CG F + ++ H Q +H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ CH C K F + + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ CH C K F + + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ + +P+ C CG+ +R +HL H +H G P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.023
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ + +P+ C CG+ +R +HL H +H G P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 27.8 bits (63), Expect = 0.98
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F H++IH+GE+
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 27.4 bits (62), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK +R S L +H H+ +P
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 27.4 bits (62), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK +R S L +H H+ +P
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GER KC C + + +HL QH R+HTGE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGER KC+ CG++ L H +HTGEKP +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGERPH+C CGK F + ++L H++ HTG
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE+PH+CN CG F + ++ H Q++H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIH 35
Score = 36.3 bits (85), Expect = 7e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+C+ CG+ F L QH+ +HTGE+
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 9e-04
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P C+ C KSF Q L +H IH EK
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 36.3 bits (85), Expect = 9e-04
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P C+ C KSF Q L +H IH EK
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + RP C CG+ + HL+ H +H G P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + RP C CG+ + HL+ H +H G P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.73
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK FI H+ IH+GE+
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
H+C CGK + + L +H + H+ +P
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
H+C CGK + + L +H + H+ +P
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 2e-09
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C ICG++ T K +L+ H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC +CGK F K+S L+ H++ HTG
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI---HTG 37
Score = 49.5 bits (119), Expect = 2e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C +C + KS L H ++HTGE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC++CG F KK + VH Q++H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +CG+ F + L H+ +HTGE+
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.005
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C KSFT+K+ L H IH EK
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 34.1 bits (79), Expect = 0.005
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C KSFT+K+ L H IH EK
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 32.1 bits (74), Expect = 0.028
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C ICG+ + K+ L VH +H G P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.028
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C ICG+ + K+ L VH +H G P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.29
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C +CGK F +H+ IH+GE+
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.38
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + +S+L+ H + H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.38
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + +S+L+ H + H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 2e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
SG++ +C+ C + HL QH RVHTGER
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+G++ ++C C + LN H +HTGE+ +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+G++P+EC+ C K F + +LN HK+ HTG
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV---HTG 37
Score = 37.5 bits (88), Expect = 3e-04
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+G+KP+EC C F + ++ H ++VH
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQH-KRVH 35
Score = 36.4 bits (85), Expect = 7e-04
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C C + F L QHK VHTGER
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C C K+F Q L +H +H E+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C C K+F Q L +H +H E+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 33.3 bits (77), Expect = 0.011
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C+ C + + HL H +H G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 33.3 bits (77), Expect = 0.011
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C+ C + + HL H +H G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.0 bits (71), Expect = 0.075
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+EC C K + LN+H + H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 31.0 bits (71), Expect = 0.075
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+EC C K + LN+H + H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 29.8 bits (68), Expect = 0.15
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C C K FI + HK +H+GER
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 2e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+G + +C C A S L +H RVHTGE+P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 6e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG + ++C+ CG+A + KL H +HTGEKP +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 3e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG +P++C CGK F++ S L H++ HTG
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG KP++CN CG F++ + H Q+VH
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+QC+ CG+ F+ + L +H+ VHTGE+
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 218 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F+Q + L RH +H EK
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 321 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K+F+Q + L RH +H EK
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 32.1 bits (74), Expect = 0.028
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.028
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 0.42
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ +H+GE+
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + S+L +H + H+ +P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + S+L +H + H+ +P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 2e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC CG++ T K +L H HTGE+ +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 49.5 bits (119), Expect = 2e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C + KS L+ H + HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 49.1 bits (118), Expect = 3e-08
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F +S L H+K HTG
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC---HTG 37
Score = 40.6 bits (96), Expect = 3e-05
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C+ CG F K +++H QK H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F + L H+ HTGER
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSG 258
G P+ C C KSFT K+ L H H E+ S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C KSFT K+ L H H E+
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 32.5 bits (75), Expect = 0.018
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F +IH+ H+GERH
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + K+ L +H H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + K+ L +H H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.24
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK + +S L H K H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.24
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK + +S L H K H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ KC C SHL H R+HTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ +KC+ CG+ T L +H +HTGEKP +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P++C CGK F + S+L H + HTG
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + LT H +HTGE+
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 3e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP++CN CG F + ++ H ++H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIH 35
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C+ C K FTQ + L H IH EK
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C+ C K FTQ + L H IH EK
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.038
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C CG+ + +HL H +H G P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.038
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C CG+ + +HL H +H G P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.47
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGK F H IH+GE+
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK + S L H + H+ +P
Sbjct: 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK + S L H + H+ +P
Sbjct: 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 54.4 bits (130), Expect = 2e-09
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 96 SKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRD------EVPSIKP 149
S S K + + TG C+ C + L H + T H D P
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWS 61
Query: 150 LKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKH 188
RKR++ + G + + +C CG + + +L+ H
Sbjct: 62 KPRKRSLLEMEGKEDA-QKVLKCMYCGHSFESLQDLSVH 99
Score = 50.5 bits (120), Expect = 5e-08
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 314 THLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHL--TIHNNEKKHQSGRRQKRNQQHDR 371
+ ++ + G F C C+ ++ L H+ T H + H++ + R
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 372 QRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKI 413
+RS L E + + + +C CG F S L+ H I
Sbjct: 65 KRS-----LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 48.6 bits (115), Expect = 2e-07
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Query: 387 FHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQA------LTTKPKLNDHM 440
F F+C C +++ LT H + TG R K L +
Sbjct: 14 FTGASKFRCKDCSAAYDTLVELTVH-MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME 72
Query: 441 LLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+K +C CG F ++ VH K
Sbjct: 73 GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 48.6 bits (115), Expect = 2e-07
Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 5/82 (6%)
Query: 58 RCDLCGKGFIHLKSYQIHKMI-----HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERP 112
RC C + L +H + K L + ++
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80
Query: 113 HECEVCGKRFAKRSNLNAHKKK 134
+C CG F +L+ H K
Sbjct: 81 LKCMYCGHSFESLQDLSVHMIK 102
Score = 47.8 bits (113), Expect = 4e-07
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 403 NSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKW 462
+S ++ + + TG +F+C C A T +L HM TG + + K+W
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRW 60
Query: 463 NMQVHKQ 469
+ +
Sbjct: 61 SKPRKRS 67
Score = 47.1 bits (111), Expect = 7e-07
Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 5/90 (5%)
Query: 273 HECPTCGKKWRTRSELNKH-----TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIH 327
C C + T EL H + K LL G +
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKH 357
C +C SF L H+ + +K
Sbjct: 80 VLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 35.9 bits (82), Expect = 0.006
Identities = 9/61 (14%), Positives = 16/61 (26%)
Query: 436 LNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVHGPDVRGTTESQLGMQVSSGGEKK 495
+ + TG C C A + + VH + + S K+
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 496 D 496
Sbjct: 67 S 67
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C+ CG+A +L +H +HTGEKP +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ CE C A + S L++H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 2e-08
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ CE CGK F S L H++ HTG
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI---HTG 37
Score = 39.0 bits (92), Expect = 1e-04
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ C CG F +Q H Q++H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F + L +H+ +HTGE+
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F + L+ H IH EK
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F + L+ H IH EK
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.052
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ CE CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.052
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ CE CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.33
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + S+L +H + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.33
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + S+L +H + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C CG+A + L H +HTGEKP +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C+ C A +HL QH RVHTGE+P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC+ CGK F++ ++L H++ HTG
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC CG F++ ++ H Q+VH
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F+ T L QH+ VHTGE+
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F+Q T L +H +H EK
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F+Q T L +H +H EK
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 32.5 bits (75), Expect = 0.018
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C+ CG+ + THL+ H +H G P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.018
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C+ CG+ + THL+ H +H G P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + + L +H + H+ +P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + + L +H + H+ +P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 2e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+A + L H H+GEKP +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C A ++S L H H+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 6e-08
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F RS+L H+ H+G
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT---HSG 37
Score = 39.1 bits (92), Expect = 8e-05
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + ++ +H Q H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIH-QATH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + ++L H+ H+GE+
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F ++ L H H+ EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K+F ++ L H H+ EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ +R ++ L +H H+G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ +R ++ L +H H+G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.063
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGK F S IH+ HSGE+
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK +R RS L H THS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK +R RS L H THS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+G++ KC C SHL +H +HTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 3e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG++ +KC+ CG+ T L H +HTGEKP +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 2e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG++P++C CGK F + S+L H+ HTG
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI---HTG 37
Score = 37.1 bits (87), Expect = 4e-04
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L +H+ +HTGE+
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG+KP++CN CG F + ++ H + +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 35.6 bits (83), Expect = 0.002
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.063
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +HL H G+H G P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.063
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +HL H G+H G P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.17
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+GE+
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.3
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.3
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C+VCS A K+HL QH + HTGE+P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C +C +A T K L H HTGEKP +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC+VC K F ++++L H+K HTG
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT---HTG 37
Score = 39.8 bits (94), Expect = 5e-05
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC VC F +K ++ H QK H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +C + F L QH+ HTGE+
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C+K+FTQK L +H H EK
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C+K+FTQK L +H H EK
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C++C + + K HL H H G P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C++C + + K HL H H G P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.12
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+EC C K + ++ L +H KTH+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.12
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+EC C K + ++ L +H KTH+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.5
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C +C K F H+ H+GE+
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C CG+A T + L H +HT +KP +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 50.6 bits (122), Expect = 7e-09
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C C A +S+L +H ++HT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 49.4 bits (119), Expect = 2e-08
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C CGK F RSNL H+K HT
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI---HTK 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ C CG F + N+ H QK+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIH 35
Score = 34.4 bits (80), Expect = 0.004
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F + L +H+ +HT ++
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+FT ++ L +H IH +K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+FT ++ L +H IH +K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 32.5 bits (75), Expect = 0.021
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P++C CG+ + +++L+ H +H P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P++C CG+ + +++L+ H +H P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 30.6 bits (70), Expect = 0.090
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + RS L KH K H+ +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 30.6 bits (70), Expect = 0.090
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + RS L KH K H+ +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 27.9 bits (63), Expect = 0.81
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F + H+ IH+ ++
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE F C CG+ T K L H +HTGE+P +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 49.4 bits (119), Expect = 2e-08
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE P C CGK F ++NL H+K HTG
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKI---HTG 37
Score = 49.4 bits (119), Expect = 2e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE C C K++L H ++HTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 40.9 bits (97), Expect = 2e-05
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE P C+ CG F K N+ +H QK+H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F C CG+ F T L H+ +HTGER
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 218 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C K FT KT L H IH E+
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 321 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C K FT KT L H IH E+
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + PF+C CG+ + KT+L++H +H G P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + PF+C CG+ + KT+L++H +H G P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 30.2 bits (69), Expect = 0.13
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
C CGK + ++ L H K H+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 30.2 bits (69), Expect = 0.13
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
C CGK + ++ L H K H+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 2e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ FKC CG++ + L H +HTGEKP +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C + + HL QH RVHTGE+P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C CGK + +R +L H++ HTG
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV---HTG 37
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ +N LTQH+ VHTGE+
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 2e-04
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C CG + ++ ++ H Q+VH
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C KS+ Q+ L +H +H EK
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C KS+ Q+ L +H +H EK
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG+ Y + HL H +H G P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG+ Y + HL H +H G P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.87
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK + R L +H + H+ +P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.87
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK + R L +H + H+ +P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK + H+ +H+GE+
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 51.8 bits (125), Expect = 2e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG++ F+C CG++ K L H +HTGEK +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G++ +C C + +K +L H R+HTGE+
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 47.2 bits (113), Expect = 1e-07
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG++P EC CGK F + NL H++ HTG
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI---HTG 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG+KP EC CG F K N+ H Q++H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIH 35
Score = 36.4 bits (85), Expect = 7e-04
Identities = 17/43 (39%), Positives = 17/43 (39%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSG 258
G PF C C KSF K L H IH EK SG
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45
Score = 36.0 bits (84), Expect = 0.001
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F + L H+ +HTGE+
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 35.6 bits (83), Expect = 0.001
Identities = 15/37 (40%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C KSF K L H IH EK
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG+ +R K +L+ H +H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG+ +R K +L+ H +H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.0 bits (66), Expect = 0.30
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
EC CGK +R + L H + H+ +
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.0 bits (66), Expect = 0.30
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
EC CGK +R + L H + H+ +
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ +KC CG+ + L+ H +HTGEK +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 51.8 bits (125), Expect = 3e-09
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ KC C + L H RVHTGE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P++C CGK + +R +L+ H++ HTG
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV---HTG 37
Score = 39.1 bits (92), Expect = 8e-05
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP++C CG + ++ ++ H Q+VH
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCD 424
++C CG+ + L H+ VHTGE+
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C C K + ++ L+ H +H EK
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C C K + ++ L+ H +H EK
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C CG+GY+ + L H +H G
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C CG+GY+ + L H +H G
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C CGK ++ R +L+ H + H+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C CGK ++ R +L+ H + H+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 51.8 bits (125), Expect = 2e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KCE C + + L H VHTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ + L H ++HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++CE CGK F R +L H HTG
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV---HTG 37
Score = 38.7 bits (91), Expect = 1e-04
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++C CG F + ++ H VH
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35
Score = 37.1 bits (87), Expect = 4e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F L H +VHTGE+
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.011
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K F + L H +H EK
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 33.3 bits (77), Expect = 0.011
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K F + L H +H EK
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 31.4 bits (72), Expect = 0.044
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ CE CG+G+ + L H +H G P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.044
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ CE CG+G+ + L H +H G P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + R +L H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.37
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + R +L H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 3e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C SHL +H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 4e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ T L H +HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 2e-07
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F + S+L H+ HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI---HTG 37
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + ++ H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIH 35
Score = 36.7 bits (86), Expect = 5e-04
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L +H+ +HTGE+
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.064
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +HL+ H G+H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.064
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +HL+ H G+H G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 27.8 bits (63), Expect = 0.82
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+GE+
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 27.4 bits (62), Expect = 1.3
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 27.4 bits (62), Expect = 1.3
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 3e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+A + KL H +HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C A S L +H R+HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 2e-07
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F++ S L H++ HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRI---HTG 37
Score = 37.9 bits (89), Expect = 2e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F++ + H Q++H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIH 35
Score = 36.7 bits (86), Expect = 7e-04
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F+ + L +H+ +HTGE+
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F+Q + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K+F+Q + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.051
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.051
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+GE+
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + S+L +H + H+ +P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + S+L +H + H+ +P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 3e-09
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C +CG+A + + L+ H +H+G+KP +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 50.6 bits (122), Expect = 8e-09
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC VCGK F+ R +L+ H++ H+G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI---HSG 37
Score = 49.4 bits (119), Expect = 2e-08
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C VC A + L H R+H+G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 40.6 bits (96), Expect = 2e-05
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC+VCG F+ + ++ VH Q++H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIH 35
Score = 35.2 bits (82), Expect = 0.002
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C +CG+ F+ +L+ H+ +H+G++
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 32.5 bits (75), Expect = 0.020
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F+ + L H IH+ +K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 32.5 bits (75), Expect = 0.020
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F+ + L H IH+ +K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C +CG+ + + L VH +H+G P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C +CG+ + + L VH +H+G P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+EC CGK + R L+ H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 29.4 bits (67), Expect = 0.25
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+EC CGK + R L+ H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 3e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C SHL +H +HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 4e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ T L H +HTGEKP +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 3e-07
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F + S+L H+ HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI---HTG 37
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + ++ H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 36.7 bits (86), Expect = 5e-04
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L +H+ +HTGE+
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K FTQ + L RH IH EK
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 32.9 bits (76), Expect = 0.015
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +HL H G+H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.015
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +HL H G+H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+GE+
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + S L +H H+ +P
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 51.8 bits (125), Expect = 3e-09
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCG 455
+GE+ FKC+ CG+ T + H H+GEKP + G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 50.2 bits (121), Expect = 9e-09
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCG 119
SGE+ KCE C + S H R H+GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 47.2 bits (113), Expect = 1e-07
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P +CE CGK F S +H++ H+G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS---HSG 37
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP +C CG F H Q+ H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICG 427
F+C CG+ F + + H+ H+GE+ G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +PF CE CG+G+ T + H H+G P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +PF CE CG+G+ T + H H+G P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 34.5 bits (80), Expect = 0.004
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C C K F + H H+ EK
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 34.5 bits (80), Expect = 0.004
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C C K F + H H+ EK
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 31.0 bits (71), Expect = 0.070
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICG 204
+C CGK + T S+ H ++HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 31.0 bits (71), Expect = 0.070
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICG 307
+C CGK + T S+ H ++HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 3e-09
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ ++C CG++ K +L+ H +HTGE P +
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC CGK F K+S L+ H++ HTG
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI---HTG 37
Score = 49.5 bits (119), Expect = 2e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C C + + KS L H R+HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 41.4 bits (98), Expect = 1e-05
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+EC+ CG F KK + VH Q++H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F + L H+ +HTGE
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSG 258
G P+ C C KSF +K+ L H IH E S
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 34.1 bits (79), Expect = 0.005
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C KSF +K+ L H IH E
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + K+ L VH +H G +P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.9 bits (76), Expect = 0.013
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + K+ L VH +H G +P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.4 bits (67), Expect = 0.24
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK FI +H+ IH+GE
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + +S+L+ H + H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.4 bits (67), Expect = 0.25
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + +S+L+ H + H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 3e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C CG++ + P L H LH+GEKP +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ C+ C + L +H R+H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+ + C+ CGK F++ L H++ H+G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL---HSG 37
Score = 38.3 bits (90), Expect = 2e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEK + C CG F++ + H +++H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLH 35
Score = 37.5 bits (88), Expect = 3e-04
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F+ L +H+ +H+GE+
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C C KSF++ L +H +H+ EK
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C C KSF++ L +H +H+ EK
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + + C+ CG+ + LL H +H+G P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.026
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + + C+ CG+ + LL H +H+G P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.46
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ C CGK + L KH + HS +P
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.46
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+ C CGK + L KH + HS +P
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.63
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F H+ +HSGE+
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 3e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE ++C CG+A + K +L H H GEKP +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 50.2 bits (121), Expect = 9e-09
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE +C C A K L H R H GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 49.4 bits (119), Expect = 2e-08
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE P+EC CGK F+++ L +H++ H G
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRT---HAG 37
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE P+EC+ CG F++K+ + H Q+ H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH-QRTH 35
Score = 36.3 bits (85), Expect = 9e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++CH CG+ F+ L H+ H GE+
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G +P+ CH C K+F++K L H H EK
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G +P+ CH C K+F++K L H H EK
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 32.1 bits (74), Expect = 0.027
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + P+ C CG+ + K L+ H H G P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.027
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + P+ C CG+ + K L+ H H G P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.48
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + + +L H +TH+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.48
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + + +L H +TH+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F H+ H+GE+
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 52.0 bits (124), Expect = 3e-09
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVT 136
CE C + S LK+H+R HT RP+ C C F + NL H K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 50.5 bits (120), Expect = 1e-08
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 198 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 253
++CE CG + + L H+ H + P+ C +CN SF K L +H+ + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 50.5 bits (120), Expect = 1e-08
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 301 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 356
++CE CG + + L H+ H + P+ C +CN SF K L +H+ + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 49.3 bits (117), Expect = 3e-08
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEK 447
+ C CG P+ L +H HT R + C C + TK L HM K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 47.8 bits (113), Expect = 9e-08
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 420 RFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVHG 473
++ C+ CG L H+ HT +P+ C C F K N+ H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 46.6 bits (110), Expect = 3e-07
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGER 111
C+ CG + H H+ R C C+ + +K +L +HM+ +
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 44.7 bits (105), Expect = 1e-06
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
+ C CG + + S L KH +TH+D+RP+ C C ++TK +L H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 44.7 bits (105), Expect = 1e-06
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
+ C CG + + S L KH +TH+D+RP+ C C ++TK +L H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 31.2 bits (70), Expect = 0.066
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 19/71 (26%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTR 285
+ C C + + L++H+ H + + + C C ++T+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRP-------------------YHCTYCNFSFKTK 42
Query: 286 SELNKHTKTHS 296
L KH K+ +
Sbjct: 43 GNLTKHMKSKA 53
Score = 29.7 bits (66), Expect = 0.27
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 29/81 (35%)
Query: 113 HECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHEC 172
+ CE CG R K S L H + HT +P + C
Sbjct: 2 YICEECGIRXKKPSMLKKHIRT---HTDV------RP--------------------YHC 32
Query: 173 PTCGKKWRTRSELNKHTKTHS 193
C ++T+ L KH K+ +
Sbjct: 33 TYCNFSFKTKGNLTKHMKSKA 53
Score = 29.3 bits (65), Expect = 0.40
Identities = 11/92 (11%), Positives = 24/92 (26%), Gaps = 36/92 (39%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFH 388
+ C C + + L++H+ H + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRP-------------------------------- 29
Query: 389 STPIFQCHLCGRCFNSPTTLTQHKIVHTGERR 420
+ C C F + LT+H ++
Sbjct: 30 ----YHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ T L H +HTG KP +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 51.4 bits (124), Expect = 4e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C SHL +H RVHTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 45.6 bits (109), Expect = 4e-07
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F + S+L H++ HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV---HTG 37
Score = 37.5 bits (88), Expect = 4e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + ++ H ++VH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVH 35
Score = 36.7 bits (86), Expect = 7e-04
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L +H+ VHTG +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K FTQ + L RH +H K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K FTQ + L RH +H K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 32.5 bits (75), Expect = 0.019
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +HL H +H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 32.5 bits (75), Expect = 0.019
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +HL H +H G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 29.0 bits (66), Expect = 0.33
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ +H+G +
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 27.1 bits (61), Expect = 1.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
++C CGK + S L +H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 27.1 bits (61), Expect = 1.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
++C CGK + S L +H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 51.4 bits (124), Expect = 4e-09
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
GE+ KCE C + +HL+ H+ +HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 49.8 bits (120), Expect = 1e-08
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+P++CE CG RF + ++L AH HTG
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI---HTG 36
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
GE+ +KC+ CG L H+L+HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 39.4 bits (93), Expect = 6e-05
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEKP++C CGARF + +++ H +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIH 34
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G G P+ C C F Q L H+ IH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G G P+ C C F Q L H+ IH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 32.9 bits (76), Expect = 0.012
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ + +P+ CE CG + HL HV +H G P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 32.9 bits (76), Expect = 0.012
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ + +P+ CE CG + HL HV +H G P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 32.9 bits (76), Expect = 0.014
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
++C CG F L H ++HTG
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 25.2 bits (56), Expect = 8.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 170 HECPTCGKKWRTRSELNKHTKTH 192
++C TCG ++ + L H H
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIH 34
Score = 25.2 bits (56), Expect = 8.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 273 HECPTCGKKWRTRSELNKHTKTH 295
++C TCG ++ + L H H
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIH 34
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 4e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE+ ++C CG+A T + L H +HTGEKP
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 6e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C C A +S+L H ++HTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C CGK F RSNL H+K HTG
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI---HTG 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ C CG F + N+ H QK+H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIH 35
Score = 36.3 bits (85), Expect = 8e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F + L H+ +HTGE+
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+FT ++ L H IH EK
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+FT ++ L H IH EK
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +++L H +H G P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +++L H +H G P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.15
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + RS L H K H+ +P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.15
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + RS L H K H+ +P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.23
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F + H+ IH+GE+
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 4e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ KC CG+A K +L H H +K +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C A KS L H R H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 46.0 bits (110), Expect = 3e-07
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C CGK F +S L H++ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT---HVD 37
Score = 39.5 bits (93), Expect = 6e-05
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C CG F K + +H Q+ H
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMH-QRTH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+C CG+ F + L H+ H ++
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.5 bits (80), Expect = 0.004
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P C CG+ + K+ L++H H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.5 bits (80), Expect = 0.004
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P C CG+ + K+ L++H H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 32.5 bits (75), Expect = 0.016
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P C C K+F K+ L H H ++K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P C C K+F K+ L H H ++K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 31.0 bits (71), Expect = 0.057
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK + +S+L H +TH D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.0 bits (71), Expect = 0.057
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK + +S+L H +TH D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 30.6 bits (70), Expect = 0.089
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F +H+ H ++H
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 52.7 bits (126), Expect = 5e-09
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Query: 393 FQCHLCGRCFNSPTTLTQH-KIVHTGERRFK--------CDICGQALTTKPKLNDHMLLH 443
C R F++ L H + H G C G++ K KL +H+ +H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 444 TGEKPHEC 451
TGEK
Sbjct: 86 TGEKSGPS 93
Score = 47.3 bits (112), Expect = 4e-07
Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 9/75 (12%)
Query: 50 INEIAKYTRCDLCGKGFIHLKSYQIH-KMIHSGERHIK--------CEVCSLALLSKSHL 100
I+E C + F + H M H G C + +K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 101 KQHMRVHTGERPHEC 115
H+RVHTGE+
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 41.5 bits (97), Expect = 4e-05
Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
Query: 191 THSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTCHFC--------NKSFTQKTGL 241
+ C + + T L+ HV H G H C KSF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 242 ERHLTIHNNEKKHQVSG 258
H+ +H EK SG
Sbjct: 79 VNHIRVHTGEKSGPSSG 95
Score = 41.5 bits (97), Expect = 5e-05
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 20/95 (21%)
Query: 106 VHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREG 165
+ + + C + F+ L H H G E
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTME--HVGGPE------------------QNNH 58
Query: 166 MPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ ECP GK ++ + +L H + H+ +
Sbjct: 59 VCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 41.1 bits (96), Expect = 6e-05
Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 78 IHSGERHIKCEVCSLALLSKSHLKQHM-RVHTGERPH--------ECEVCGKRFAKRSNL 128
I + + C + L H+ H G EC GK F + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 129 NAHKKKVTRHTG 140
H + HTG
Sbjct: 79 VNHIR---VHTG 87
Score = 40.7 bits (95), Expect = 8e-05
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 10/85 (11%)
Query: 219 MHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTC 278
+ C+++F+ L H+T +H + + ECP
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVT-----MEHVGGPEQNNHVCYW-----EECPRE 68
Query: 279 GKKWRTRSELNKHTKTHSDLRPFVC 303
GK ++ + +L H + H+ +
Sbjct: 69 GKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 40.3 bits (94), Expect = 1e-04
Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 9/74 (12%)
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTCHFC--------NKSFTQKTGL 344
+ C + + T L+ HV H G H C KSF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 345 ERHLTIHNNEKKHQ 358
H+ +H EK
Sbjct: 79 VNHIRVHTGEKSGP 92
Score = 35.7 bits (82), Expect = 0.004
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 9/68 (13%)
Query: 273 HECPTCGKKWRTRSELNKH-TKTHSDLRPFV--------CEICGQGYRTKTHLLVHVGMH 323
+C + + T EL H T H C G+ ++ K L+ H+ +H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 324 NGIHPFTC 331
G
Sbjct: 86 TGEKSGPS 93
Score = 35.7 bits (82), Expect = 0.004
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 10/68 (14%)
Query: 414 VHTGERRFKCDICGQALTTKPKLNDHML-LHTGEKPH--------ECNVCGARFAKKWNM 464
+ + C + +T +L H+ H G EC G F K+ +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 465 QVHKQKVH 472
H +VH
Sbjct: 79 VNH-IRVH 85
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 51.0 bits (123), Expect = 5e-09
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
GER +C C L S+ QH R+HTGE+P
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 1e-08
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
GER +C CG+ H +HTGEKP +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GER H C CGK F + SN H++ HTG
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI---HTG 37
Score = 39.1 bits (92), Expect = 1e-04
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GE+ H C+ CG F + N H +++H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+C CG+ F + QH+ +HTGE+
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 8e-04
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G C C K F Q + +H IH EK
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 36.4 bits (85), Expect = 8e-04
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G C C K F Q + +H IH EK
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 8/42 (19%), Positives = 15/42 (35%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ R C CG+ + ++ + H +H G P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.002
Identities = 8/42 (19%), Positives = 15/42 (35%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ R C CG+ + ++ + H +H G P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.81
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
H C CGK + S +H + H+ +P
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.81
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
H C CGK + S +H + H+ +P
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 5e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +KC+ CG+ T L +H +HTG KP +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 51.0 bits (123), Expect = 5e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ KC C SHL H R+HTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 2e-07
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P++C CGK F + S+L H++ HTG
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI---HTG 37
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP++CN CG F + ++ H Q++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L H+ +HTG +
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 218 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K FTQ + L H IH K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 321 GMHNGIH----PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C+ C K FTQ + L H IH K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 229
+ + +P+ C CG+ + +HL H +H G+ P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCH 332
+ + +P+ C CG+ + +HL H +H G+ P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 27.9 bits (63), Expect = 0.79
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ IH+G +
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 27.1 bits (61), Expect = 1.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+C CGK + S L H + H+ ++P
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 27.1 bits (61), Expect = 1.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+C CGK + S L H + H+ ++P
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 51.0 bits (123), Expect = 6e-09
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ FKC CG+ + + LN H LHTGEKP +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 3e-08
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C CGK F++RS LN H K HTG
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL---HTG 37
Score = 48.3 bits (116), Expect = 4e-08
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ KC C +S L H ++HTGE+P
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 7e-05
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C CG F+++ + VH K+H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F+ + L H +HTGE+
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C K F++++ L H +H EK
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C K F++++ L H +H EK
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG+G+ ++ L VH +H G P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG+G+ ++ L VH +H G P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGKGF + +H +H+GE+
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.24
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CGK + RS LN H K H+ +P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.24
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CGK + RS LN H K H+ +P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 7e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ + C+ CG+ + K L+ H HTGEKP +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
SGE+ C C KS L H R HTGE+P
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P+ C CGK F+++S L+AH++ HTG
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRT---HTG 37
Score = 40.6 bits (96), Expect = 3e-05
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP+ CN CG F++K + H Q+ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P+ C+ C K+F+QK+ L H H EK
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G P+ C+ C K+F+QK+ L H H EK
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F+ + L+ H+ HTGE+
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.014
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C CG+ + K+ L H H G P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.014
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C CG+ + K+ L H H G P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.21
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + +S L+ H +TH+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.21
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + +S L+ H +TH+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.55
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C+ CGK F H+ H+GE+
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 7e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C C A SKS+L HMR H+GE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
GE+ + C CG+A ++K L HM H+GEKP
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+P+ C CGK F+ +S L H + H+G
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT---HSG 37
Score = 39.8 bits (94), Expect = 4e-05
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEKP+ C+ CG F+ K + +H + H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F+S + L H H+GE+
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C K+F+ K+ L H+ H+ EK
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C K+F+ K+ L H+ H+ EK
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 33.3 bits (77), Expect = 0.010
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C CG+ + +K++L++H+ H+G P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.010
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C CG+ + +K++L++H+ H+G P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.16
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK + ++S L H +THS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK + ++S L H +THS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.18
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F IH HSGE+
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 50.6 bits (122), Expect = 8e-09
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G + C C A SKS+L H R HTGE
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 48.6 bits (117), Expect = 4e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TG + + C+ CG+A +K L H HTGE
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 47.1 bits (113), Expect = 1e-07
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG +P+ C CGK F +S L H + HTG
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT---HTG 37
Score = 40.2 bits (95), Expect = 3e-05
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG KP+ CN CG F K + +H + H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTH 35
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F S + L H HTGE
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + ++P+VC CG+ +R+K++L++H H G +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + ++P+VC CG+ +R+K++L++H H G +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
G+ P+ C+ C K+F K+ L H H E SG
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 32.8 bits (76), Expect = 0.015
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQ 255
G+ P+ C+ C K+F K+ L H H E
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS 42
Score = 30.1 bits (69), Expect = 0.12
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ C CGK +R++S L HT+TH+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 30.1 bits (69), Expect = 0.12
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+ C CGK +R++S L HT+TH+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 28.6 bits (65), Expect = 0.49
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGK F IH H+GE
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 50.2 bits (121), Expect = 9e-09
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 414 VHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ F C C +A ++K L H H EKP +
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 47.5 bits (114), Expect = 7e-08
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 78 IHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ C C A SKS+L H + H E+P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 43.7 bits (104), Expect = 2e-06
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P C C K F+ +S L H++ H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQT---HAE 35
Score = 40.2 bits (95), Expect = 3e-05
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP C+ C F+ K + VH Q+ H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVH-QQTH 33
Score = 38.7 bits (91), Expect = 1e-04
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F C C + F+S + L H+ H E+
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G PF C C K+F+ K+ L H H EK
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G PF C C K+F+ K+ L H H EK
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 33.3 bits (77), Expect = 0.010
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 189 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +PF C C + + +K++LLVH H P
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 33.3 bits (77), Expect = 0.010
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 292 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +PF C C + + +K++LLVH H P
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 31.0 bits (71), Expect = 0.061
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
C C K + ++S L H +TH++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 31.0 bits (71), Expect = 0.061
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
C C K + ++S L H +TH++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 29.0 bits (66), Expect = 0.32
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C C K F +H+ H+ E+
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 50.2 bits (121), Expect = 9e-09
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+P+ CE+CG RF L +H + HTG
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR---IHTG 36
Score = 49.8 bits (120), Expect = 1e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
GE+ CE+C LK H+R+HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 49.0 bits (118), Expect = 3e-08
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
GE+ + C+ICG L H+ +HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 40.9 bits (97), Expect = 1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEKP+ C +CG RF ++ H ++H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH-LRIH 34
Score = 39.0 bits (92), Expect = 8e-05
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G G P+ C C F L+ HL IH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 39.0 bits (92), Expect = 8e-05
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G G P+ C C F L+ HL IH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ + +P+ CEICG +R L H+ +H G P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ + +P+ CEICG +R L H+ +H G P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 32.1 bits (74), Expect = 0.024
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
+ C +CG F TL H +HTG
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 26.7 bits (60), Expect = 2.3
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+ C CG ++R L H + H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 26.7 bits (60), Expect = 2.3
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPF 301
+ C CG ++R L H + H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 50.3 bits (121), Expect = 9e-09
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG++P+EC CGK F + ++L H + HTG
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYY--HTG 38
Score = 49.9 bits (120), Expect = 1e-08
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHM-LLHTGEKPHECN 452
TG++ ++C CG+A L H HTGEKP +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 46.4 bits (111), Expect = 2e-07
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMR-VHTGERPHEC 115
+G++ +C C A + + L +H R HTGE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 39.1 bits (92), Expect = 9e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG+KP+EC CG F + ++ H + H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 33.7 bits (78), Expect = 0.007
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 393 FQCHLCGRCFNSPTTLTQH-KIVHTGERRFKC 423
++C CG+ F T+L +H + HTGE+
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.2 bits (74), Expect = 0.027
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEK 252
G P+ C C K+F Q T L RH H EK
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 32.2 bits (74), Expect = 0.027
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHL-TIHNNEK 355
G P+ C C K+F Q T L RH H EK
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTC 228
+ + +P+ C CG+ + T L+ H H G P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHV-GMHNGIHPFTC 331
+ + +P+ C CG+ + T L+ H H G P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 50.2 bits (121), Expect = 1e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 74 IHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C C A +KS+L H R HTGE
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 49.8 bits (120), Expect = 1e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE+ ++C+ C +A TK L H HTGE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 49.8 bits (120), Expect = 1e-08
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+EC C K F +SNL H++ HTG
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT---HTG 37
Score = 42.1 bits (100), Expect = 7e-06
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ECN C F K N+ VH Q+ H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTH 35
Score = 36.7 bits (86), Expect = 6e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ C + FN+ + L H+ HTGE
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 35.9 bits (84), Expect = 0.001
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 318 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
G P+ C+ C K+F K+ L H H E SG
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
Score = 35.1 bits (82), Expect = 0.002
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C+ C K+F K+ L H H E
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 32.8 bits (76), Expect = 0.012
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C C + + TK++L+VH H G +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.012
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C C + + TK++L+VH H G +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.1 bits (69), Expect = 0.14
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC C K + T+S L H +TH+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.1 bits (69), Expect = 0.14
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC C K + T+S L H +TH+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ C K F + +H+ H+GE
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 50.2 bits (121), Expect = 1e-08
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
GE+ +KC C + L H +H GEKP +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 49.1 bits (118), Expect = 2e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
GE+ KC C + S L+ H VH GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 46.0 bits (110), Expect = 3e-07
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+ +C C F++ S+L H+ H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV---HVG 37
Score = 39.1 bits (92), Expect = 9e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEK +C C F++ ++++H Q VH
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVH 35
Score = 37.1 bits (87), Expect = 4e-04
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C C CF+ ++L H+ VH GE+
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G + C C+ F+Q + L H +H EK
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G + C C+ F+Q + L H +H EK
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
+C C F S ++H+ +H GE+
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.081
Identities = 7/41 (17%), Positives = 14/41 (34%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + C C + + L +H +H G P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.081
Identities = 7/41 (17%), Positives = 14/41 (34%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + C C + + L +H +H G P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.4
Identities = 7/31 (22%), Positives = 10/31 (32%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C C + S L H H +P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.4
Identities = 7/31 (22%), Positives = 10/31 (32%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C C + S L H H +P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 50.2 bits (121), Expect = 1e-08
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
S + +C C KSHL QH R+HTGE+P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 49.9 bits (120), Expect = 1e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
+ + +C CG+ T K LN H +HTGEKP
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 6e-08
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+ + H+C CG+ F +S+LN H++ HTG
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI---HTG 37
Score = 40.2 bits (95), Expect = 3e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+ K H+C+ CG F K ++ H Q++H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIH 35
Score = 36.8 bits (86), Expect = 5e-04
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVS 257
+ CH C + FT K+ L +H IH EK S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 36.8 bits (86), Expect = 5e-04
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+ CH C + FT K+ L +H IH EK
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 36.4 bits (85), Expect = 9e-04
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
QCH CGR F + L QH+ +HTGE+
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S + C CG+G+ K+HL H +H G P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S + C CG+G+ K+HL H +H G P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.23
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
H+C CG+ + +S LN+H + H+ +P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.23
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
H+C CG+ + +S LN+H + H+ +P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 49.8 bits (120), Expect = 1e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TG + + C C + + K +L H HTG KP +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TG +P+ C C K F+ +S L H++ HTG
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS---HTG 37
Score = 47.1 bits (113), Expect = 1e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G + C C+ KS L H R HTG +P
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 41.0 bits (97), Expect = 2e-05
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG KP+ C+ C F+ K + VH Q+ H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + ++P+ C C + + K+ L+VH H G+ P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + ++P+ C C + + K+ L+VH H G+ P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C C + F+ + L H+ HTG +
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G+ P+ C C K+F+ K+ L H H K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G+ P+ C C K+F+ K+ L H H K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+ C C K + +S+L H ++H+ ++P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.8 bits (68), Expect = 0.18
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+ C C K + +S+L H ++H+ ++P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 27.9 bits (63), Expect = 0.90
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C C K F +H+ H+G +
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 49.8 bits (120), Expect = 1e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
G +KC C ++ + K +L H +HT EKP +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 49.8 bits (120), Expect = 1e-08
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+G KC C + K L H R+HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 45.2 bits (108), Expect = 7e-07
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
G P++C C K F+ + L H++ HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM---HTR 37
Score = 39.8 bits (94), Expect = 5e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
G P++C+ C F+ K + VH Q++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C C + F+ L H+ +HT E+
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G++P+ C C KSF+ K L H +H EK
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G++P+ C C KSF+ K L H +H EK
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + + P+ C C + + K LLVH MH P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + + P+ C C + + K LLVH MH P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.4 bits (72), Expect = 0.050
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C C K F +H+ +H+ E+
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.1 bits (61), Expect = 1.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
++C C K + + L H + H+ +P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.1 bits (61), Expect = 1.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
++C C K + + L H + H+ +P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 49.9 bits (120), Expect = 1e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C+ C + S L +H RVH+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 49.9 bits (120), Expect = 1e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ + C CG++ L H +H+GEKP +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 47.6 bits (114), Expect = 9e-08
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P+ C+ CGK F S L H++ H+G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV---HSG 37
Score = 37.2 bits (87), Expect = 4e-04
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP+ C CG F + H Q+VH
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVH 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C CG+ F + L +H+ VH+GE+
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 34.5 bits (80), Expect = 0.003
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P+ C C KSF + L +H +H+ EK
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 34.5 bits (80), Expect = 0.003
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P+ C C KSF + L +H +H+ EK
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 31.8 bits (73), Expect = 0.033
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P+ C+ CG+ +R + LL H +H+G P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 31.8 bits (73), Expect = 0.033
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P+ C+ CG+ +R + LL H +H+G P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.14
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
+ C CGK +R S L KH + HS +P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.14
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
+ C CGK +R S L KH + HS +P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F H+ +HSGE+
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 49.4 bits (119), Expect = 2e-08
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE+ F+C CG++ + +L H +HTGEKP
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 2e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C C + S L H R+HTGE+P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 7e-08
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P EC CGK F+ S L H++ HTG
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRI---HTG 37
Score = 39.0 bits (92), Expect = 1e-04
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP EC CG F+ + H Q++H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH-QRIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C CG+ F+ + L H+ +HTGE+
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C KSF+ + L H IH EK
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C KSF+ + L H IH EK
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.021
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG+ + + L H +H G P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
EC CGK + S+L H + H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.37
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
EC CGK + S+L H + H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 0.54
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCE 88
C CGK F H+ IH+GE+
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGPS 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 48.7 bits (117), Expect = 3e-08
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ +C C A + KS L H R H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.9 bits (115), Expect = 5e-08
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
+GE+ ++C+ CG+A K L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.5 bits (114), Expect = 9e-08
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P+EC CGK F +S L H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERT---HAG 37
Score = 40.2 bits (95), Expect = 3e-05
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP+ECN CG F K + VH ++ H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTH 35
Score = 37.1 bits (87), Expect = 4e-04
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
+G P+ C+ C K+F K+ L H H SG
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
Score = 34.0 bits (79), Expect = 0.005
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQ 255
+G P+ C+ C K+F K+ L H H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS 42
Score = 33.3 bits (77), Expect = 0.009
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C+ CG+ F + L H+ H G
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ S +P+ C CG+ + K+ L+VH H G+ +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ S +P+ C CG+ + K+ L+VH H G+ +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 30.2 bits (69), Expect = 0.14
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C+ CGK FI +H+ H+G
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 28.7 bits (65), Expect = 0.40
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + +S L H +TH+ +
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 28.7 bits (65), Expect = 0.40
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + +S L H +TH+ +
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 48.7 bits (117), Expect = 4e-08
Identities = 13/38 (34%), Positives = 14/38 (36%)
Query: 78 IHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE +C C A K L H R H GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 46.7 bits (112), Expect = 1e-07
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
+GE ++C CG+A K +L H H GE
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 43.3 bits (103), Expect = 2e-06
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE P+EC CGK F ++ L +H++ H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRT---HAG 35
Score = 38.3 bits (90), Expect = 1e-04
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GE P+EC+ CG F +K + H Q+ H
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISH-QRTH 33
Score = 36.3 bits (85), Expect = 6e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ FN L H+ H GE
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.3 bits (85), Expect = 8e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
+G +P+ C C K+F +K L H H E SG
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 33.6 bits (78), Expect = 0.007
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G +P+ C C K+F +K L H H E
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGES 37
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 190 KTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
S P+ C CG+ + K L+ H H G +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 32.1 bits (74), Expect = 0.026
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 293 KTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
S P+ C CG+ + K L+ H H G +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.4 bits (67), Expect = 0.20
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + + +L H +TH+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.4 bits (67), Expect = 0.20
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + + +L H +TH+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 28.2 bits (64), Expect = 0.64
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F H+ H+GE
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 4e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ +C CG++ + +L H +HTGE P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C C + S L H R+HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 47.1 bits (113), Expect = 1e-07
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+PHEC CGK F+ S L H++ HTG
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI---HTG 37
Score = 39.1 bits (92), Expect = 1e-04
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKPHEC CG F+ + VH Q++H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+C CG+ F+ + L H+ +HTGE
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 33.3 bits (77), Expect = 0.010
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G P C C KSF+ + L H IH E
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 33.3 bits (77), Expect = 0.010
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G P C C KSF+ + L H IH E
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +P C CG+ + + L+VH +H G +P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 32.1 bits (74), Expect = 0.024
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +P C CG+ + + L+VH +H G +P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 28.3 bits (64), Expect = 0.57
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
HEC CGK + S+L H + H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 28.3 bits (64), Expect = 0.57
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
HEC CGK + S+L H + H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 48.3 bits (116), Expect = 4e-08
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE+P+ C+ CGK F+++ +L H + HTG
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV---HTG 36
Score = 46.0 bits (110), Expect = 2e-07
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
GE+ ++CD CG+A + K L H+ +HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 45.6 bits (109), Expect = 3e-07
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
GE+ +C+ C A K L H+RVHTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 41.0 bits (97), Expect = 2e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GEKP+ C+ CG F++K ++ VH +VH
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G G P+ C C K+F+QK L H+ +H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 37.5 bits (88), Expect = 3e-04
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G G P+ C C K+F+QK L H+ +H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.4 bits (72), Expect = 0.040
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
++C CG+ F+ +L H VHTG
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.4 bits (72), Expect = 0.046
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ + +P+ C+ CG+ + K L+VH+ +H G P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 31.4 bits (72), Expect = 0.046
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ + +P+ C+ CG+ + K L+VH+ +H G P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 26.4 bits (59), Expect = 2.9
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+ C CGK + + L H + H+ P
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 26.4 bits (59), Expect = 2.9
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPF 301
+ C CGK + + L H + H+ P
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 48.3 bits (116), Expect = 5e-08
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE +C C K L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 47.9 bits (115), Expect = 5e-08
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE ++C CG+ + K +L H H+G+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 46.3 bits (111), Expect = 2e-07
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE P+EC CGK F+++ L +H+K H+G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK---THSG 37
Score = 39.4 bits (93), Expect = 6e-05
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGE P+EC CG F++K + H QK H
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSH-QKTH 35
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
G +P+ C C K F++K L H H+ + SG
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
Score = 34.0 bits (79), Expect = 0.005
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
++C CG+ F+ L H+ H+G+
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G +P+ C C K F++K L H H+ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + P+ C CG+ + K L+ H H+G +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 32.1 bits (74), Expect = 0.026
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + P+ C CG+ + K L+ H H+G +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.4 bits (67), Expect = 0.20
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+EC CGK + + +L H KTHS
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.4 bits (67), Expect = 0.20
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+EC CGK + + +L H KTHS
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 26.7 bits (60), Expect = 1.9
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKC 87
C CGK F H+ HSG+
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.9 bits (115), Expect = 6e-08
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE+ F+C C +A TK L H HTGEKP
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 6e-08
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P EC C K F +SNL H++ HTG
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT---HTG 37
Score = 46.7 bits (112), Expect = 2e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ +C C A +KS+L H R HTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 4e-05
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP EC+ C F K N+ VH Q+ H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTH 35
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
F+C C + FN+ + L H+ HTGE+
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.010
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C K+F K+ L H H EK
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 33.2 bits (77), Expect = 0.010
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C K+F K+ L H H EK
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 32.8 bits (76), Expect = 0.014
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C C + + TK++L+VH H G P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 32.8 bits (76), Expect = 0.014
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C C + + TK++L+VH H G P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
EC C K + T+S L H +TH+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
EC C K + T+S L H +TH+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 48.0 bits (115), Expect = 6e-08
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P +C+ CG F+ +L H + H
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS---HER 37
Score = 47.6 bits (114), Expect = 9e-08
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
TGE+ F+C CG + L H+ H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 46.4 bits (111), Expect = 2e-07
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+GE+ +C+ C + L +H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 37.2 bits (87), Expect = 4e-04
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G PF C C +F+ L +HL H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 37.2 bits (87), Expect = 4e-04
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G PF C C +F+ L +HL H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 35.3 bits (82), Expect = 0.002
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TGEKP +C CG F+ ++ H + H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSH 35
Score = 35.3 bits (82), Expect = 0.002
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCD 424
FQC CG F+ +L +H H
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 32.9 bits (76), Expect = 0.011
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C+ CG + L H+ H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 32.9 bits (76), Expect = 0.011
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C+ CG + L H+ H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 30.6 bits (70), Expect = 0.082
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 200
+C CG + L KH ++H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 30.6 bits (70), Expect = 0.082
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVC 303
+C CG + L KH ++H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 47.2 bits (113), Expect = 1e-07
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+ H C+ CGK F S L H++ H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRV---HMG 37
Score = 46.0 bits (110), Expect = 3e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECE 116
SGE+ C+ C S L+ H RVH GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 44.5 bits (106), Expect = 9e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 411 HKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECN 452
+GE+ CD CG+ L H +H GEK +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 41.4 bits (98), Expect = 1e-05
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEK H C+ CG F +++H Q+VH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVH 35
Score = 36.4 bits (85), Expect = 8e-04
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCD 424
C CG+ F + L H+ VH GE+
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G TC C K+F + L H +H EK
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 34.1 bits (79), Expect = 0.006
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G TC C K+F + L H +H EK
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 32.6 bits (75), Expect = 0.016
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCS 91
CD CGK F ++ + +IH+ +H GE KC S
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGE---KCSGPS 44
Score = 30.3 bits (69), Expect = 0.11
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
+ S + C+ CG+ + + L +H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 30.3 bits (69), Expect = 0.11
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
+ S + C+ CG+ + + L +H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 27.2 bits (61), Expect = 1.8
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
H C CGK + S L H + H +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 27.2 bits (61), Expect = 1.8
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
H C CGK + S L H + H +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 46.8 bits (112), Expect = 2e-07
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
T + + C CGK F + +L H+K HT
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK---IHTR 37
Score = 43.3 bits (103), Expect = 3e-06
Identities = 8/41 (19%), Positives = 14/41 (34%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
+ + C C A HL +H ++HT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 40.6 bits (96), Expect = 2e-05
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
T + + C+ CG+A T L H +HT +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 36.4 bits (85), Expect = 7e-04
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 438 DHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
T K + CN CG F + +++ H QK+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIH 35
Score = 34.5 bits (80), Expect = 0.003
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
+ C+ C K+FT+ L RH IH + SG
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 34.5 bits (80), Expect = 0.004
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C+ CG+ F LT+H+ +HT +
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 32.6 bits (75), Expect = 0.016
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+ C+ C K+FT+ L RH IH +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKS 39
Score = 31.8 bits (73), Expect = 0.029
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ +D + + C CG+ + HL H +H +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 31.8 bits (73), Expect = 0.029
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ +D + + C CG+ + HL H +H +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 46.5 bits (111), Expect = 2e-07
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 103 HMRVHTGERPHEC--EVCGKRFAKRSNLNAHKKKVTRHTG 140
TGE+P C CG RF++ L+ H++ H+G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS---HSG 39
Score = 41.9 bits (99), Expect = 1e-05
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 411 HKIVHTGERRFKCD--ICGQALTTKPKLNDHMLLHTGEKPHECN 452
TGE+ F C CG + +L+ H H+G KP +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.7 bits (96), Expect = 2e-05
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 75 HKMIHSGERHIKC--EVCSLALLSKSHLKQHMRVHTGERPHECE 116
+GE+ C C L +H R H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 37.7 bits (88), Expect = 3e-04
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 216 HVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQVSG 258
G PF C + C F++ L RH H+ K S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47
Score = 37.3 bits (87), Expect = 4e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 319 HVGMHNGIHPFTCHF--CNKSFTQKTGLERHLTIHNNEKKHQ 358
G PF C + C F++ L RH H+ K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG 44
Score = 33.8 bits (78), Expect = 0.006
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 439 HMLLHTGEKPHECNV--CGARFAKKWNMQVHKQK 470
TGEKP C CG RF++ + H++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36
Score = 33.0 bits (76), Expect = 0.014
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 393 FQCH--LCGRCFNSPTTLTQHKIVHTGERRFKCD 424
F C CG F+ L++H+ H+G +
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.7 bits (70), Expect = 0.078
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 173 PTCGKKWRTRSELNKHTKTHSDLRPFVCE 201
P CG ++ EL++H ++HS ++P
Sbjct: 18 PGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.7 bits (70), Expect = 0.078
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 276 PTCGKKWRTRSELNKHTKTHSDLRPFVCE 304
P CG ++ EL++H ++HS ++P
Sbjct: 18 PGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.3 bits (69), Expect = 0.13
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 188 HTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+ + +PF C CG + L H H+G+ P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 30.3 bits (69), Expect = 0.13
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 291 HTKTHSDLRPFVC--EICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+ + +PF C CG + L H H+G+ P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 48.0 bits (113), Expect = 3e-07
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 3/95 (3%)
Query: 388 HSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEK 447
+ ++QC LC +S H+ + C C + +H K
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYK 68
Query: 448 PHECNVCGARFAKKWNMQVHKQKVHGPDVRGTTES 482
C C F +++ H+ +VH + T
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG 103
Score = 44.9 bits (105), Expect = 4e-06
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
C LC L H+ + C CSL S ++H + C C
Sbjct: 19 CRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLEC 75
Query: 119 GKRFAKRSNLNAHKKKV 135
+ F ++ H+ +V
Sbjct: 76 MRTFKSSFSIWRHQVEV 92
Score = 43.0 bits (100), Expect = 2e-05
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 169 IHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 228
+++C C K + E H + + VC C + + H TC
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEY-KKLTC 72
Query: 229 HFCNKSFTQKTGLERH-LTIHN 249
C ++F + RH + +HN
Sbjct: 73 LECMRTFKSSFSIWRHQVEVHN 94
Score = 43.0 bits (100), Expect = 2e-05
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 272 IHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTC 331
+++C C K + E H + + VC C + + H TC
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEY-KKLTC 72
Query: 332 HFCNKSFTQKTGLERH-LTIHN 352
C ++F + RH + +HN
Sbjct: 73 LECMRTFKSSFSIWRHQVEVHN 94
Score = 42.6 bits (99), Expect = 2e-05
Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 22/96 (22%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRT 284
+ C CN + H + N CP C ++ +
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNAAV---------------------CPYCSLRFFS 54
Query: 285 RSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHV 320
+H ++ + + C C + +++ + H
Sbjct: 55 PELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89
Score = 35.3 bits (80), Expect = 0.008
Identities = 14/112 (12%), Positives = 24/112 (21%), Gaps = 39/112 (34%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLF 387
+ C CN + H + N
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA--------------------------------- 42
Query: 388 HSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDH 439
C C F SP +H+ ++ C C + + + H
Sbjct: 43 -----AVCPYCSLRFFSPELKQEHE-SKCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 33.3 bits (75), Expect = 0.037
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 81 GERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKK 134
+ +C +C+ L S H R+ C C RF H+ K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESK 64
Score = 30.6 bits (68), Expect = 0.33
Identities = 12/112 (10%), Positives = 31/112 (27%), Gaps = 23/112 (20%)
Query: 183 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 242
S + + + + C +C + H + + C +C+ F +
Sbjct: 3 SGSSGASPVENK-EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQ 59
Query: 243 RHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKT 294
H + +K C C + +++ + +H
Sbjct: 60 EHESKCEYKK--------------------LTCLECMRTFKSSFSIWRHQVE 91
Score = 28.7 bits (63), Expect = 1.4
Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 345
S + + + + C +C + H + + C +C+ F +
Sbjct: 3 SGSSGASPVENK-EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQ 59
Query: 346 RHLTIHNNEK 355
H + +K
Sbjct: 60 EHESKCEYKK 69
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 46.6 bits (110), Expect = 4e-07
Identities = 19/98 (19%), Positives = 27/98 (27%), Gaps = 36/98 (36%)
Query: 96 SKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRN 155
S + ++H G+R +C CG F +RS L+ K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT---------------------- 39
Query: 156 ISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHS 193
C C K + LNK S
Sbjct: 40 --------------PMCEKCRKDSCQEAALNKDEGNES 63
Score = 45.4 bits (107), Expect = 1e-06
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 7/65 (10%)
Query: 404 SPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWN 463
S + + + +H G+R KC CG + K C C ++
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAA 54
Query: 464 MQVHK 468
+ +
Sbjct: 55 LNKDE 59
Score = 44.3 bits (104), Expect = 2e-06
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKK 133
+ IH G+R KC C + + +S + + CE C K + + LN +
Sbjct: 9 RQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEG 60
Score = 43.5 bits (102), Expect = 4e-06
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 7/70 (10%)
Query: 183 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 242
K K H R C CG + ++ L C C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 243 RHLTIHNNEK 252
+ + +K
Sbjct: 57 KDEGNESGKK 66
Score = 43.5 bits (102), Expect = 4e-06
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 7/70 (10%)
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 345
K K H R C CG + ++ L C C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 346 RHLTIHNNEK 355
+ + +K
Sbjct: 57 KDEGNESGKK 66
Score = 39.6 bits (92), Expect = 1e-04
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 55 KYTRCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
+ +C CG FI + S + CE C ++ L + +G++
Sbjct: 17 RSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 31.9 bits (72), Expect = 0.054
Identities = 15/88 (17%), Positives = 21/88 (23%), Gaps = 26/88 (29%)
Query: 209 TKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREG 268
+ +H G C C F +++ L R T
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT---------------------- 39
Query: 269 MPLIHECPTCGKKWRTRSELNKHTKTHS 296
C C K + LNK S
Sbjct: 40 ----PMCEKCRKDSCQEAALNKDEGNES 63
Score = 31.2 bits (70), Expect = 0.099
Identities = 12/108 (11%), Positives = 23/108 (21%), Gaps = 43/108 (39%)
Query: 312 TKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDR 371
+ +H G C C F +++ L R T
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT---------------------- 39
Query: 372 QRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGER 419
C C + L + + +G++
Sbjct: 40 ---------------------PMCEKCRKDSCQEAALNKDEGNESGKK 66
Score = 30.4 bits (68), Expect = 0.19
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 7/53 (13%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
+C CG + RS L++ + +CE C + + L G +G
Sbjct: 19 QKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEGNESG 64
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 48.0 bits (113), Expect = 4e-07
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 97 KSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNI 156
S K+++ H G V + + L +K++ R + + + + L +
Sbjct: 7 DSGSKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63
Query: 157 SFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVH 216
L ++ + CP C + + L +H + VC +C + + + L H
Sbjct: 64 YRLLASKAISQFV--CPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDH 119
Query: 217 VG-MHNG 222
V HN
Sbjct: 120 VCKKHNI 126
Score = 43.8 bits (102), Expect = 2e-05
Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 66 FIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKR 125
+ SY + C +C + S LKQH+R E C VC K F
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113
Query: 126 SNLNAHKKK 134
+ H K
Sbjct: 114 DSALDHVCK 122
Score = 40.7 bits (94), Expect = 1e-04
Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 286 SELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLE 345
S + FVC +C + + L H+ H C C K FT
Sbjct: 60 SSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSAL 117
Query: 346 RHLTIHNN 353
H+ +N
Sbjct: 118 DHVCKKHN 125
Score = 39.1 bits (90), Expect = 5e-04
Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 14/133 (10%)
Query: 341 KTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLCGR 400
+G +++L+ H H + KR Q ++ + + +L
Sbjct: 7 DSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL--- 63
Query: 401 CFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAK 460
+ +F C +C ++ L H+ E C VC F
Sbjct: 64 ---------YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTS 112
Query: 461 KWNMQVHKQKVHG 473
+ H K H
Sbjct: 113 TDSALDHVCKKHN 125
Score = 36.8 bits (84), Expect = 0.004
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 275 CPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVG-MHNG 325
CP C + + L +H + VC +C + + + L HV HN
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 33.8 bits (76), Expect = 0.041
Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 22/88 (25%)
Query: 210 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGM 269
++ L + I F C C F+ L++H+ + K
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK----------------- 101
Query: 270 PLIHECPTCGKKWRTRSELNKHT-KTHS 296
CP C K++ + H K H+
Sbjct: 102 ----VCPVCKKEFTSTDSALDHVCKKHN 125
Score = 29.1 bits (64), Expect = 1.4
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 313 KTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 356
++ L + I F C C F+ L++H+ + K
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV 102
Score = 28.4 bits (62), Expect = 2.6
Identities = 19/124 (15%), Positives = 34/124 (27%), Gaps = 36/124 (29%)
Query: 75 HKMIHSGERHIKCEV----CSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNA 130
H++ +R I+ V + LL +S + C +C F+ +L
Sbjct: 33 HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQ 92
Query: 131 HKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHT- 189
H + CP C K++ + H
Sbjct: 93 HIRYTEHTK-------------------------------VCPVCKKEFTSTDSALDHVC 121
Query: 190 KTHS 193
K H+
Sbjct: 122 KKHN 125
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 44.2 bits (105), Expect = 1e-06
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
GE P+ C CGK F +R +L H++ +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS---CSQ 36
Score = 42.7 bits (101), Expect = 4e-06
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
GE + C CG++ T + L H + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 42.7 bits (101), Expect = 5e-06
Identities = 8/39 (20%), Positives = 11/39 (28%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
GE C C + + L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 39.6 bits (93), Expect = 5e-05
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
G G P+ C C KSFTQ+ L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 39.6 bits (93), Expect = 5e-05
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
G G P+ C C KSFTQ+ L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 38.4 bits (90), Expect = 1e-04
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GE P+ C CG F ++ ++ VH Q+
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVH-QRSC 34
Score = 31.9 bits (73), Expect = 0.030
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGER 83
C CGK F S +H+ S
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 31.1 bits (71), Expect = 0.063
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
+ C CG+ F +L H+ +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 30.7 bits (70), Expect = 0.086
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ + P++C CG+ + + L VH + P +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 30.7 bits (70), Expect = 0.086
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ + P++C CG+ + + L VH + P +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 28.4 bits (64), Expect = 0.59
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+ C CGK + R L H ++ S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 28.4 bits (64), Expect = 0.59
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPF 301
+ C CGK + R L H ++ S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 43.8 bits (103), Expect = 2e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVC 454
++ C+ICG+ LN H L H+GEKP+
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 42.2 bits (99), Expect = 8e-06
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
+ + CE+C HL +H H+GE+P+
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.8 bits (90), Expect = 1e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDIC 426
C +CG+ F L +HK+ H+GE+ +
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.5 bits (84), Expect = 7e-04
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 189 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCN 232
+ + CEICG+ +R HL H H+G P++ +
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 36.5 bits (84), Expect = 7e-04
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 292 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCN 335
+ + CEICG+ +R HL H H+G P++ +
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 36.5 bits (84), Expect = 9e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEIC 203
C CGK +R LN+H +HS +P+
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.5 bits (84), Expect = 9e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEIC 306
C CGK +R LN+H +HS +P+
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.3 bits (81), Expect = 0.002
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 55 KYTRCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCS 91
K C++CGK F + HK+ HSGE+ S
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.005
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+ CE+CGK F +LN HK H+G
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKL---SHSG 37
Score = 33.8 bits (77), Expect = 0.007
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
C C K F L RH H+ EK + SG
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG 44
Score = 32.6 bits (74), Expect = 0.018
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVS 257
C C K F L RH H+ EK +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG 44
Score = 28.8 bits (64), Expect = 0.46
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHK 468
K C +CG F +++ HK
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHK 32
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 42.6 bits (101), Expect = 4e-06
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+G+R +EC+ CGK F ++ +L H++ HTG
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERI---HTG 35
Score = 41.8 bits (99), Expect = 9e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPH 449
+G+R ++C CG++ K L H +HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPH 113
SG+R +C+ C + K L H R+HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 37.9 bits (89), Expect = 2e-04
Identities = 9/30 (30%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+G++ +EC CG F +K ++ +H +++H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLH-ERIH 33
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G + C C KSF QK L H IH
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+G + C C KSF QK L H IH
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 34.9 bits (81), Expect = 0.002
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
++C CG+ F +LT H+ +HTG
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 28.7 bits (65), Expect = 0.38
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 189 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
+ S R + C+ CG+ +R K L +H +H G P +
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 28.7 bits (65), Expect = 0.38
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 292 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
+ S R + C+ CG+ +R K L +H +H G P +
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 27.2 bits (61), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGER 83
C CGK F S +H+ IH+G
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.8 bits (60), Expect = 2.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHSDLRPF 198
+EC CGK +R + L H + H+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 26.8 bits (60), Expect = 2.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSDLRPF 301
+EC CGK +R + L H + H+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 41.6 bits (98), Expect = 1e-05
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 103 HMRVHTGERPHECEVCGKRFAKRSNLNAHKK 133
R TG +P +C C + F++ +L H+K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 31.9 bits (73), Expect = 0.022
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVH 107
+G + +C C + HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.5 bits (72), Expect = 0.039
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 188 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 220
T+ + ++PF C C + + HL +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.5 bits (72), Expect = 0.039
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 291 HTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
T+ + ++PF C C + + HL +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.4 bits (69), Expect = 0.077
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
TG KP +C C F++ ++ +H +K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRH 34
Score = 30.4 bits (69), Expect = 0.082
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLH 443
TG + F+C C ++ + L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 0.21
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIH 248
GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 0.21
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIH 351
GI PF C C++SF++ L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 40.8 bits (96), Expect = 2e-05
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 105 RVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
+GE+P+ C C + F+ + L H+K HT
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQK---MHTV 35
Score = 40.0 bits (94), Expect = 3e-05
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHEC 115
SGE+ C C + L QH ++HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 37.7 bits (88), Expect = 2e-04
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHEC 451
+GE+ + C C + + +L H +HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 35.0 bits (81), Expect = 0.002
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
+GEKP+ C C F+ + H QK+H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMH 33
Score = 34.6 bits (80), Expect = 0.003
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
+G P++C C ++F+ L +H +H + SG
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42
Score = 31.9 bits (73), Expect = 0.025
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+G P++C C ++F+ L +H +H +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS 37
Score = 31.9 bits (73), Expect = 0.030
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERRFKC 423
+ C C F+ L QH+ +HT +
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 30.8 bits (70), Expect = 0.072
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 189 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
+ S +P+ C C + + L+ H MH
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 30.8 bits (70), Expect = 0.072
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 292 TKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
+ S +P+ C C + + L+ H MH
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 25.4 bits (56), Expect = 7.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 170 HECPTCGKKWRTRSELNKHTKTHS 193
+ C C + + + L +H K H+
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHT 34
Score = 25.4 bits (56), Expect = 7.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHS 296
+ C C + + + L +H K H+
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHT 34
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 39.1 bits (91), Expect = 8e-05
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHE 114
+GE KC C +++L QH R H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 39.1 bits (91), Expect = 1e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 319 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSG 360
G +PF C C++ FTQ+ L +H H + SG
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44
Score = 37.5 bits (87), Expect = 3e-04
Identities = 10/41 (24%), Positives = 13/41 (31%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHE 450
GE FKC C + T + L H H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 36.4 bits (84), Expect = 7e-04
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 102 QHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGR 141
GE P +C C + F +R+ L H++ H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER---THARK 38
Score = 36.4 bits (84), Expect = 7e-04
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 216 HVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKH 254
G +PF C C++ FTQ+ L +H H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 31.8 bits (72), Expect = 0.034
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 439 HMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH 472
GE P +C+ C F ++ + H ++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTH 35
Score = 31.8 bits (72), Expect = 0.035
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
F+C C R F L QH+ H +
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 30.2 bits (68), Expect = 0.11
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 187 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
+ + PF C C + + + +L+ H H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 30.2 bits (68), Expect = 0.11
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 290 KHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
+ + PF C C + + + +L+ H H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 25.2 bits (55), Expect = 8.6
Identities = 5/26 (19%), Positives = 10/26 (38%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHSGER 83
+C C + F H+ H+ +
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHARKS 39
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.3 bits (99), Expect = 4e-04
Identities = 67/453 (14%), Positives = 119/453 (26%), Gaps = 184/453 (40%)
Query: 115 CEVCGKRFAKRSNLNAHKKKVTRHTGRD-----EVPSIKPLKRKRNISFLTGAREGMPLI 169
+ + ++ +KV G + E PS P + +L PLI
Sbjct: 188 IKFSAETLSELIRTTLDAEKVFTQ-GLNILEWLENPSNTP-----DKDYLLSIPISCPLI 241
Query: 170 ------HECPTCGKKWRTRSELNKHTKTHSDLRPFVCEI--CGQG--------------- 206
H T T +LR ++ QG
Sbjct: 242 GVIQLAHYVVTA----------KLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWES 291
Query: 207 ----YRTKTHLLVHVGMHNGIHPFTCH--FCNKSFTQKTGLERHLTIHNNEKKHQVSGRF 260
R +L +G+ C+ + N S + ++ NNE
Sbjct: 292 FFVSVRKAITVLFFIGVR-------CYEAYPNTSLPPSILED---SLENNE--------- 332
Query: 261 SFNRAREGMPLIHECP---TCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHL- 316
G+P P T+ ++ + +T +HL
Sbjct: 333 -------GVP----SPMLSISNL---TQEQVQDYVN-----------------KTNSHLP 361
Query: 317 ---LVHVGMHNGIHPFTCHFCNKSFTQKTG----LERHLTIHNNEKKHQSGRRQKRNQQH 369
V + + NG +G L L + + K SG Q R
Sbjct: 362 AGKQVEISLVNGAKNLVV----------SGPPQSL-YGLNLTLRKAKAPSGLDQSRIPFS 410
Query: 370 DRQRSESDTTL---AEEDNLFHS------TPIFQCHLCGRCFN-SPTTLTQHKI-VH--- 415
+R+ S+ L + FHS + + L + + + +I V+
Sbjct: 411 ERKLKFSNRFLPVASP----FHSHLLVPASDLINKDLVKNNVSFNAKDI---QIPVYDTF 463
Query: 416 TGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVHKQKVH--- 472
G D+ + + ++ D ++ P W + H
Sbjct: 464 DGS-----DLRVLSGSISERIVD-CIIR---LP--VK---------WETTTQFKATHILD 503
Query: 473 -GPD------------VRGTTESQLGMQVSSGG 492
GP GT G++V G
Sbjct: 504 FGPGGASGLGVLTHRNKDGT-----GVRVIVAG 531
Score = 40.8 bits (95), Expect = 0.001
Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 72/216 (33%)
Query: 24 IVRKLVDNGHKIFLCNTEP-------GMPDSLLINEIAKYTRCDLCGKGFIHL-KSYQIH 75
I+ ++N P + + + + K T HL Q+
Sbjct: 323 ILEDSLENNE------GVPSPMLSISNLTQEQVQDYVNK-TNS--------HLPAGKQVE 367
Query: 76 KMIHSGERHIKCEVCS---LALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHK 132
+ +G +++ V S +L L +R + P + F++R K
Sbjct: 368 ISLVNGAKNL---VVSGPPQSLY---GLNLTLR--KAKAPSGLDQSRIPFSER------K 413
Query: 133 KKV-TR--------HTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRS 183
K R H+ L A + + + +
Sbjct: 414 LKFSNRFLPVASPFHS-----------------HLLVPASDL--INKDLVKNNVSFNA-K 453
Query: 184 ELN---KHTKTHSDLRPFVCEICGQGYRTKTHLLVH 216
++ T SDLR I + L V
Sbjct: 454 DIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVK 489
Score = 39.6 bits (92), Expect = 0.003
Identities = 55/392 (14%), Positives = 107/392 (27%), Gaps = 135/392 (34%)
Query: 2 VFAGKNNNLVKIYLLVIDEKVLIVRKLVDNGHKIFLCNTEPGMPDSL-------LINEIA 54
+F G+ N Y +E L R L T + L L I
Sbjct: 159 IFGGQGNTDD--YF---EE--L--RDLYQ---------TYHVLVGDLIKFSAETLSELIR 200
Query: 55 KYTRCD-LCGKGFIHLKSYQIHKMIHSGERH------IKCEVCSLALLSKSHLKQHMRVH 107
+ + +G I + + + + + S L+ L ++
Sbjct: 201 TTLDAEKVFTQGL------NILEWLENPSNTPDKDYLLSIPI-SCPLIGVIQLAHYVVT- 252
Query: 108 TGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGR----------DEVPS-----IKPLKR 152
++ G L ++ K T H+ D S K +
Sbjct: 253 -------AKLLGFTPG---ELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAIT- 301
Query: 153 KRNISFLTGAR--EGMP-------LIHECPTCGKKWRT---------RSELNKHTKTHSD 194
+ F G R E P ++ + + + + ++ +
Sbjct: 302 ---VLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN---- 354
Query: 195 LRPFVCEICGQGYRTKTHL----LVHVGMHNGI-------HPFT-CHFCN--KSFTQKTG 240
+T +HL V + + NG P + + +G
Sbjct: 355 -------------KTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSG 401
Query: 241 LERHLTIHNNEKKHQVSGRF---S--FN-----RAREGMPLIHECPTCGKKWRTRSELN- 289
L++ I +E+K + S RF + F+ A + + + + ++
Sbjct: 402 LDQS-RIPFSERKLKFSNRFLPVASPFHSHLLVPASDL--INKDLVKNNVSFNA-KDIQI 457
Query: 290 --KHTKTHSDLRPFVCEICGQGYRTKTHLLVH 319
T SDLR I + L V
Sbjct: 458 PVYDTFDGSDLRVLSGSISERIVDCIIRLPVK 489
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 38.7 bits (89), Expect = 0.005
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 7/86 (8%)
Query: 403 NSPTTLTQHKIVHTGERR------FKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGA 456
N+ + + G + ++ P + ++C+VC A
Sbjct: 129 NANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSA 188
Query: 457 RFAKKWNMQVHKQKVHGPDVRGTTES 482
++ H HG T S
Sbjct: 189 VLFSPLDLDAH-VASHGLHGNMTLTS 213
Score = 37.9 bits (87), Expect = 0.008
Identities = 8/55 (14%), Positives = 15/55 (27%), Gaps = 2/55 (3%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
E S + + ++C VC +L+AH +
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVA--SHGLH 206
Score = 36.0 bits (82), Expect = 0.033
Identities = 7/38 (18%), Positives = 14/38 (36%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVS 257
+ H + CH C+ L+ H+ H ++
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLT 212
Score = 36.0 bits (82), Expect = 0.039
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIH 351
+ H + CH C+ L+ H+ H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.4 bits (78), Expect = 0.090
Identities = 10/61 (16%), Positives = 14/61 (22%), Gaps = 1/61 (1%)
Query: 161 GAREGMPLIHE-CPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGM 219
G P+ T S + C +C + L HV
Sbjct: 143 GGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVAS 202
Query: 220 H 220
H
Sbjct: 203 H 203
Score = 34.1 bits (77), Expect = 0.13
Identities = 10/63 (15%), Positives = 16/63 (25%)
Query: 45 PDSLLINEIAKYTRCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHM 104
+ + + + S +C VCS L S L H+
Sbjct: 141 NEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHV 200
Query: 105 RVH 107
H
Sbjct: 201 ASH 203
Score = 34.1 bits (77), Expect = 0.14
Identities = 8/49 (16%), Positives = 11/49 (22%)
Query: 275 CPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
T S + C +C + L HV H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.18
Identities = 7/72 (9%), Positives = 20/72 (27%)
Query: 123 AKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTR 182
++ N++ + + + K ++C C +
Sbjct: 134 SRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSP 193
Query: 183 SELNKHTKTHSD 194
+L+ H +H
Sbjct: 194 LDLDAHVASHGL 205
Score = 33.7 bits (76), Expect = 0.18
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVH 415
+QCH+C SP L H H
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASH 203
Score = 30.6 bits (68), Expect = 1.7
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 273 HECPTCGKKWRTRSELNKHTKTHSD 297
++C C + +L+ H +H
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 29.8 bits (66), Expect = 2.9
Identities = 4/23 (17%), Positives = 6/23 (26%)
Query: 58 RCDLCGKGFIHLKSYQIHKMIHS 80
+C +C H H
Sbjct: 182 QCHVCSAVLFSPLDLDAHVASHG 204
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 34.1 bits (77), Expect = 0.005
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEK 252
FTC +CNK F K L+ HL IH NEK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 34.1 bits (77), Expect = 0.005
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEK 355
FTC +CNK F K L+ HL IH NEK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.4 bits (57), Expect = 2.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 419 RRFKCDICGQALTTKPKLNDHMLLHTGEK 447
+ F C+ C + K L H+ +HT EK
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 25.6 bits (55), Expect = 4.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 87 CEVCSLALLSKSHLKQHMRVHTGER 111
CE C+ K L+ H+R+HT E+
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 24.8 bits (53), Expect = 9.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 193 SDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
S + F CE C + ++ K L H+ +H
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 24.8 bits (53), Expect = 9.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 296 SDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
S + F CE C + ++ K L H+ +H
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 33.6 bits (76), Expect = 0.006
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 250
+G PF C C +FT K RHL +H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 33.6 bits (76), Expect = 0.006
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHNN 353
+G PF C C +FT K RHL +H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 31.6 bits (71), Expect = 0.028
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHT 108
SG+R C +C A +K++ +H++VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 30.9 bits (69), Expect = 0.069
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHT 444
+G+R F C IC A TTK H+ +HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 28.6 bits (63), Expect = 0.46
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKK 133
+G+RP C +C F ++N H K
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 27.0 bits (59), Expect = 1.7
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVH 467
+G++P C +C + F K N H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH 26
Score = 26.6 bits (58), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 192 HSDLRPFVCEICGQGYRTKTHLLVHVGMH 220
S RPFVC IC + TK + H+ +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 26.6 bits (58), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 295 HSDLRPFVCEICGQGYRTKTHLLVHVGMH 323
S RPFVC IC + TK + H+ +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.011
Identities = 42/366 (11%), Positives = 89/366 (24%), Gaps = 94/366 (25%)
Query: 15 LLVIDE----KVLIVRKLVDNGHKIFLCNTEPGMPDSLLINEIAKYTRCDLCGKGFIHLK 70
LLV+ K + KI L + D L + D +
Sbjct: 247 LLVLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFL-SAATTTHISLDHHSMTLTPDE 302
Query: 71 SYQI-HKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLN 129
+ K + + + EV + S + + +R + K N +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL-ATW-------DNW-KHVNCD 353
Query: 130 AHKKKVTRHTGRDEVPSIKPLK----RKR-----------NISFLT--------GAREGM 166
+ S+ L+ RK +I + + M
Sbjct: 354 KLTTIIES--------SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 167 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGI--- 223
++++ S + K K I K L +H I
Sbjct: 406 VVVNKL-------HKYSLVEKQPK------ESTISIPSIYLELKVKLENEYALHRSIVDH 452
Query: 224 HPFTCHFCNKSFTQKTG-------LERHLTIHNNEKKHQVSGR----FSFNRAREGMPLI 272
+ F + + HL + ++ + F F + +
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK----IR 508
Query: 273 HECPTCGKKWRTRSELN------KH-TKTH-------SDLRPFVCEICGQGYRTKTHLLV 318
H+ + L + + + F+ +I +K L+
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568
Query: 319 HVGMHN 324
+ +
Sbjct: 569 RIALMA 574
Score = 34.8 bits (79), Expect = 0.084
Identities = 77/577 (13%), Positives = 132/577 (22%), Gaps = 184/577 (31%)
Query: 24 IVRKLVDNGHKIFLCNTEPGMPDSLL----INEIAK----YTRCDLCGKGFIHLKSYQ-- 73
I+ D F C MP S+L I+ I + F L S Q
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL---FWTLLSKQEE 77
Query: 74 -IHKMIHSGER--------HIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAK 124
+ K + R IK E +++++ +++Q R++ + FAK
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV---------FAK 128
Query: 125 RSNLNAHKKKVTRHTGRDEVPSIKP-LKRKRNISFLTGAREGMPLIHECPTCGKKW---- 179
+ V+R ++ L R + +G+ GK W
Sbjct: 129 YN--------VSRL---QPYLKLRQALLELRPAKNVL--IDGVL------GSGKTWVALD 169
Query: 180 ------------------------RTRSELNKHTKTHSDLRPFVCEICGQGYRTKTH--- 212
+ L K + P K
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 213 -----------------LLV--HVGMHNGIHPFTCHFC-------NKSFTQ--KTGLERH 244
LLV +V + F C K T H
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-CKILLTTRFKQVTDFLSAATTTH 288
Query: 245 LTIHNNEK---KHQVSGRFS--FN--------RAREGMPL--------IHECPTCGKKWR 283
+++ ++ +V + P I + W+
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 284 TRSELNKHTKTHS----DLRP------FV-CEICGQGYRTKTHLLVHV---GMHNGIHPF 329
+K T L P F + T LL + + + +
Sbjct: 349 -HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 330 TCHFCNKSFTQKTGLERHLTIHN---NEKKHQSGRRQKRNQ-----QHDRQRSESDTTLA 381
S +K E ++I + K + D
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 382 EEDNLFHSTPIFQCHLC----GRCFNSPTTL------TQHKIVHTGE------------- 418
D F+S HL + + KI H
Sbjct: 468 YLDQYFYSHIGH--HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525
Query: 419 --RRFKCDICGQALTTKPKLND--HMLLHTGEKPHEC 451
+ +K IC + +N L E
Sbjct: 526 QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562
Score = 30.6 bits (68), Expect = 1.5
Identities = 30/232 (12%), Positives = 61/232 (26%), Gaps = 52/232 (22%)
Query: 12 KIY--LLVIDEKVLIVRKLVDNGHKIFLCNTEPGMPDSLLINEIAKYTRCDLCGKGFIHL 69
K++ L V I L+ + + ++ N++ KY+ L K
Sbjct: 373 KMFDRLSVFPPSAHIPTILL----SLIWFDVIKSDVMVVV-NKLHKYS---LVEK---QP 421
Query: 70 KSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLN 129
K I I S +K ++ + L H + +
Sbjct: 422 KESTIS--IPSIYLELKVKLENEYAL-------HRSIVDHYNIPKT-FDSDDLIPPYLDQ 471
Query: 130 ------AHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRS 183
H K H R + + L + FL + H+ +
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFL----DFRFLEQK-----IRHDSTAWNASGSILN 522
Query: 184 ELN------KH-TKTH-------SDLRPFVCEICGQGYRTKTHLLVHVGMHN 221
L + + + F+ +I +K L+ + +
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Score = 29.4 bits (65), Expect = 3.3
Identities = 53/415 (12%), Positives = 107/415 (25%), Gaps = 113/415 (27%)
Query: 7 NNNLVKIYLLVIDEKVLIVRKLV---DNGHKIFLCNTEPGMP---DSLLINEIAKYTR-- 58
+N + Y + + L +R+ + + + G+ + + ++ +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID----GVLGSGKTWVALDVCLSYKVQ 177
Query: 59 CDLCGKGF-IHLKSYQ----IHKMIHSGERHIKCEVCSLALLSKS------HLKQHMRVH 107
C + K F ++LK+ + +M+ I S + S + ++ +R
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 108 TGERPHE-C-----EVCGKRFAK--------------RSNLNAHKKKVTRHTGRDEVPSI 147
+P+E C V + + + T H D
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS-- 295
Query: 148 KPLKRKRNISFLTG------------AREGMPL--------IHECPTCGKKWRTRSELNK 187
L S L P I + W+ +K
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK-HVNCDK 354
Query: 188 HTKTHS----DLRP------FV-CEICGQGYRTKTHLLVHV---GMHNGIHPFTCHFCNK 233
T L P F + T LL + + + +
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 234 SFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTK 293
S +K E ++I S E +H + + K
Sbjct: 415 SLVEKQPKESTISIP--------SIYLELKVKLENEYALH------RSIVDHYNIPKTFD 460
Query: 294 THSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHL 348
+ + P++ Y H+G H H N ++ L R +
Sbjct: 461 SDDLIPPYL-----DQY-----FYSHIG-H--------HLKNIEHPERMTLFRMV 496
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 34.5 bits (78), Expect = 0.013
Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 301 FVCEICGQ-GYRTKTHLLVHVGM-HNGIHPFTCHFCNKSFTQKTGLERH-LTIHNNEKKH 357
VC C +T L H+ + C C K F K GL H + H+ +
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD 84
Query: 358 QSG 360
Sbjct: 85 AEA 87
Score = 34.2 bits (77), Expect = 0.017
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 198 FVCEICGQ-GYRTKTHLLVHVGM-HNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 253
VC C +T L H+ + C C K F K GL H ++ K
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 30.7 bits (68), Expect = 0.26
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 171 ECPTCGK-KWRTRSELNKHTKT-HSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHP 225
CPTC +T L KH + C+ C + +++K L H + P
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 30.7 bits (68), Expect = 0.26
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 274 ECPTCGK-KWRTRSELNKHTKT-HSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHP 328
CPTC +T L KH + C+ C + +++K L H + P
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 32.2 bits (72), Expect = 0.024
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 107 HTGERPHECEVCGKRFAKRSNLNAHKK 133
+GE+P+ C VCG RF ++ ++ H +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 31.8 bits (71), Expect = 0.038
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 443 HTGEKPHECNVCGARFAKKWNMQVHKQKVHG 473
+GEKP+ C VCG RF +K M H + G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.071
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 192 HSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 222
S +P+ C +CG ++ K + HV H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.071
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 295 HSDLRPFVCEICGQGYRTKTHLLVHVGMHNG 325
S +P+ C +CG ++ K + HV H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 28.0 bits (61), Expect = 0.85
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHTG 109
SGE+ C VC L K + H+R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.6 bits (60), Expect = 1.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHTG 445
+GE+ + C +CG K +++ H+ H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 26.8 bits (58), Expect = 2.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 220 HNGIHPFTCHFCNKSFTQKTGLERHLTIHN 249
+G P++C C F +K + H+ H+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34
Score = 26.8 bits (58), Expect = 2.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 323 HNGIHPFTCHFCNKSFTQKTGLERHLTIHN 352
+G P++C C F +K + H+ H+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 32.1 bits (72), Expect = 0.032
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGERR 420
QC CG F +L +H+++H G++
Sbjct: 13 HQCRECGEIFFQYVSLIEHQVLHMGQKN 40
Score = 27.1 bits (59), Expect = 1.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 108 TGERPHECEVCGKRFAKRSNLNAHK 132
+ E+ H+C CG+ F + +L H+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQ 32
Score = 27.1 bits (59), Expect = 1.8
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVS 257
C C + F Q L H +H +K S
Sbjct: 12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS 44
Score = 26.7 bits (58), Expect = 2.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 416 TGERRFKCDICGQALTTKPKLNDHMLLHTGEK 447
+ E+ +C CG+ L +H +LH G+K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 26.7 bits (58), Expect = 2.7
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQ 358
C C + F Q L H +H +K
Sbjct: 12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1
Length = 88
Score = 32.1 bits (72), Expect = 0.073
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQR 373
+ C C+ L HL IHN E + ++ R+++R Q +Q+
Sbjct: 26 YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQK 70
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 30.4 bits (69), Expect = 0.075
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
F C C ++F ++ L+RH H NEK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.4 bits (69), Expect = 0.075
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
F C C ++F ++ L+RH H NEK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.4 bits (69), Expect = 0.089
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 83 RHIKCEVCSLALLSKSHLKQHMRVHTGER 111
R CEVC+ A + HLK+H R HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 27.3 bits (61), Expect = 0.91
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
F C +C R F L +H HT E+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.4 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 419 RRFKCDICGQALTTKPKLNDHMLLHTGEK 447
R F C++C +A + L H HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.0 bits (55), Expect = 6.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMHNG 222
R FVCE+C + + + HL H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 25.0 bits (55), Expect = 6.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHNG 325
R FVCE+C + + + HL H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 25.0 bits (55), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 111 RPHECEVCGKRFAKRSNLNAHKKKVTRHTG 140
R CEVC + FA++ +L H + HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR---SHTN 27
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 34.0 bits (77), Expect = 0.086
Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Query: 72 YQIHKMIHSGERHI--KCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLN 129
++ + I GE E L S S H + GE+ + E + +L
Sbjct: 166 FRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLR 225
Query: 130 AHKKKVTRHTGR 141
G+
Sbjct: 226 GPIHLSVLRQGK 237
Score = 32.1 bits (72), Expect = 0.34
Identities = 10/50 (20%), Positives = 20/50 (40%)
Query: 398 CGRCFNSPTTLTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEK 447
+ +S + T H+ + GE+R + + Q L L + L +
Sbjct: 186 YMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 31.7 bits (71), Expect = 0.42
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Query: 32 GHKIFLCNTEPGMPDSLLINEIAKYTRCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCS 91
+I+ P E + + K + IH+ + GE+ ++ E
Sbjct: 161 SERIYFRACRDIRP-----GEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSE 215
Query: 92 LALLSKSHLKQHMRVHTGER 111
L + L+ + + +
Sbjct: 216 QVLDNPEDLRGPIHLSVLRQ 235
Score = 30.2 bits (67), Expect = 1.4
Identities = 6/54 (11%), Positives = 15/54 (27%)
Query: 195 LRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIH 248
LR + E + + + +H + G + L + +
Sbjct: 178 LRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 30.2 bits (67), Expect = 1.4
Identities = 6/54 (11%), Positives = 15/54 (27%)
Query: 298 LRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIH 351
LR + E + + + +H + G + L + +
Sbjct: 178 LRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 27.5 bits (60), Expect = 8.8
Identities = 7/48 (14%), Positives = 14/48 (29%)
Query: 372 QRSESDTTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGER 419
+R S + NL Q + ++P L + +
Sbjct: 188 KRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 30.1 bits (67), Expect = 0.11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 223 IHPFTCHFCNKSFTQKTGLERHLTIHNNEK 252
+ P+ C C + F L+RH+ IH EK
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 30.1 bits (67), Expect = 0.11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 326 IHPFTCHFCNKSFTQKTGLERHLTIHNNEK 355
+ P+ C C + F L+RH+ IH EK
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 28.2 bits (62), Expect = 0.43
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGER 419
+ C C R F P L +H +HTGE+
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 25.1 bits (54), Expect = 6.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 RHIKCEVCSLALLSKSHLKQHMRVHTGER 111
+ C C L++H+R+HTGE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 30.0 bits (68), Expect = 0.12
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 98 SHLKQHMRVHTGER 111
SHL+ H+R HTGER
Sbjct: 24 SHLRAHLRWHTGER 37
Score = 29.6 bits (67), Expect = 0.17
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 108 TGERPHECEV--CGKRFAKRSNLNAHKKKVTRHTG 140
++ H C + CGK + K S+L AH + HTG
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLR---WHTG 35
Score = 26.5 bits (59), Expect = 2.0
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 225 PFTCHF--CNKSFTQKTGLERHLTIHNNEK 252
CH C K + + + L HL H E+
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.5 bits (59), Expect = 2.0
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEK 355
CH C K + + + L HL H E+
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 34.0 bits (77), Expect = 0.15
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 447 KPHECNVCGARFAKKWNMQVHKQKVHGPDVRGTTES 482
+ CNVC ARF+ + H + H D +
Sbjct: 115 SSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLAT 150
Score = 30.9 bits (69), Expect = 1.4
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 146 SIKPLKRKRNISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKT-HSD 194
+ KP + + P + C C ++ T S L++H ++ H D
Sbjct: 93 ATKPAAVVSDPQSMKVTPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRD 142
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.8 bits (66), Expect = 0.16
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 421 FKCDICGQALTTKPKLNDHMLLHTGEK 447
+KC C A K LN H+ HTGEK
Sbjct: 10 YKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.29
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 86 KCEVCSLALLSKSHLKQHMRVHTGER 111
KC CS A K++L H+R HTGE+
Sbjct: 11 KCPQCSYASAIKANLNVHLRKHTGEK 36
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 29.5 bits (67), Expect = 0.16
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 225 PFTCHF--CNKSFTQKTGLERHLTIHNNEK 252
PF C + C K FT+ L+RH H EK
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.5 bits (67), Expect = 0.16
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 328 PFTCHF--CNKSFTQKTGLERHLTIHNNEK 355
PF C + C K FT+ L+RH H EK
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 28.0 bits (63), Expect = 0.49
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 111 RPHEC--EVCGKRFAKRSNLNAHKKKVTRHTG 140
RP C CGKRF + L HK+ HTG
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRT---HTG 29
Score = 25.6 bits (57), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 393 FQCH--LCGRCFNSPTTLTQHKIVHTGER 419
F C CG+ F L +HK HTGE+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 24.9 bits (55), Expect = 6.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 99 HLKQHMRVHTGER 111
L++H R HTGE+
Sbjct: 19 ELQRHKRTHTGEK 31
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.18
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 79 HSGERHIKCEVCSLALLSKSHLKQHMRVHT 108
E+ KC C +L QH R+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.9 bits (61), Expect = 0.89
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLLHT 444
E+ FKC+ C + + L H +HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 25.6 bits (55), Expect = 5.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHT 416
F+C+ C + F+ LTQH+ +HT
Sbjct: 13 FKCNKCEKTFSCSKYLTQHERIHT 36
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 29.1 bits (65), Expect = 0.22
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 447 KPHECNVCGARFAKKWNMQVHKQKVHGPDV 476
K + C +C F ++ + H QK+H ++
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL 30
Score = 26.7 bits (59), Expect = 1.4
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 111 RPHECEVCGKRFAKRSNLNAHKKKV 135
+ + C +C + F +R L H +K+
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKI 25
Score = 25.2 bits (55), Expect = 4.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 225 PFTCHFCNKSFTQKTGLERH 244
+ C CN++FT++ L RH
Sbjct: 2 AYACGLCNRAFTRRDLLIRH 21
Score = 25.2 bits (55), Expect = 4.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 328 PFTCHFCNKSFTQKTGLERH 347
+ C CN++FT++ L RH
Sbjct: 2 AYACGLCNRAFTRRDLLIRH 21
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 29.0 bits (64), Expect = 0.24
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNN 250
+ C C +SF +K+ L RH +H N
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
Score = 29.0 bits (64), Expect = 0.24
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNN 353
+ C C +SF +K+ L RH +H N
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 29.5 bits (65), Expect = 0.25
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 393 FQCHLCGRCFNSPTTLTQHKIVHTGE 418
+C CG+ F + L +H+ +H GE
Sbjct: 13 SECQECGKIFRHSSLLIEHQALHAGE 38
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 30.9 bits (69), Expect = 0.26
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 182 RSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGM-HNGI---HPFTCHFCNKSFTQ 237
+ + + + C+ C HV H + + C CN +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 238 KTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHE 274
L H N K H F + I E
Sbjct: 63 YDALSEH-----NLKYHPGEENFKLTMVKRNNQTIFE 94
Score = 30.5 bits (68), Expect = 0.41
Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 285 RSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGM-HNGI---HPFTCHFCNKSFTQ 340
+ + + + C+ C HV H + + C CN +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 341 KTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTL 380
L H ++ +++ KRN Q +++ +D T
Sbjct: 63 YDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTF 102
Score = 28.2 bits (62), Expect = 2.2
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Query: 75 HKMIHSGERHIKCEVCSLALLSKSHLKQHMR-VHTGER---PHECEVCGKRFAKRSNLNA 130
++ E +C+ C+ + H+ H + C C + L+
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 131 HKKKVTRHTGRD 142
H K H G +
Sbjct: 69 HNLKY--HPGEE 78
Score = 27.0 bits (59), Expect = 5.2
Identities = 10/62 (16%), Positives = 16/62 (25%), Gaps = 4/62 (6%)
Query: 415 HTGERRFKCDICGQALTTKPKLNDHMLL-HTG---EKPHECNVCGARFAKKWNMQVHKQK 470
E ++C C H+ H + C C + + H K
Sbjct: 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK 72
Query: 471 VH 472
H
Sbjct: 73 YH 74
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 29.4 bits (65), Expect = 0.26
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 110 ERPHECEVCGKRFAKRSNLNAHK 132
++P+ C++CGKR+ R L+ H
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHY 27
Score = 28.2 bits (62), Expect = 0.68
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 446 EKPHECNVCGARFAKKWNMQVHKQKVHGPDVRGTTESQ 483
+KP+ C++CG R+ + + H H + G +
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKED 42
Score = 27.4 bits (60), Expect = 1.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMHNGIHP 225
+P+ C+ICG+ Y+ + L H +
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYAHSHLAEE 35
Score = 27.4 bits (60), Expect = 1.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHNGIHP 328
+P+ C+ICG+ Y+ + L H +
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYAHSHLAEE 35
Score = 25.1 bits (54), Expect = 8.6
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKR 365
P+ C C K + + GL H + ++ + +
Sbjct: 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQ 44
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 31.5 bits (70), Expect = 0.26
Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 5/87 (5%)
Query: 326 IHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQHDRQRSESDTTLAEEDN 385
C C+ E H +KH + R+ + A
Sbjct: 30 FSDTQCKVCSAVLIS----ESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAE 85
Query: 386 LFHSTPIFQ-CHLCGRCFNSPTTLTQH 411
+ + C +C F+SP H
Sbjct: 86 ISDGEDRSKCCPVCNMTFSSPVVAESH 112
Score = 27.6 bits (60), Expect = 4.6
Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 11/99 (11%)
Query: 275 CPTCGKKWRTRSELNKHTKTHSD---LRPFVCEICGQGYRTKTHLLVHVGMHNGIHP--F 329
C C + S+ H ++ +R ++ G+ +
Sbjct: 35 CKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSK 94
Query: 330 TCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRNQQ 368
C CN +F+ E H K H + + +Q
Sbjct: 95 CCPVCNMTFSSPVVAESHY----IGKTHI--KNLRLREQ 127
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 30.6 bits (68), Expect = 0.26
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 84 HIKCEVCSLALLSK-SHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAH 131
+ C C LK+HM + C CGK+ + + H
Sbjct: 34 SVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH 81
Score = 30.6 bits (68), Expect = 0.28
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 198 FVCEICGQ-GYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 253
C C G +T L H+ FTCH C K G++ H+ ++N
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 30.6 bits (68), Expect = 0.28
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 301 FVCEICGQ-GYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 356
C C G +T L H+ FTCH C K G++ H+ ++N
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR
complex function; HET: ADP; 2.31A {Pyrococcus furiosus}
PDB: 3ur3_C 4doz_A
Length = 693
Score = 32.4 bits (72), Expect = 0.38
Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 2/123 (1%)
Query: 94 LLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRK 153
L + ++ + +C VCG+ A ++ H + + + + +KR
Sbjct: 249 LGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPMCLIKRY 308
Query: 154 RNISFLT--GAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKT 211
+ + G + + + K WR + S R + +
Sbjct: 309 YPVWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLVSKAREVSEDFVKDNMLVDS 368
Query: 212 HLL 214
L
Sbjct: 369 DLY 371
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 28.3 bits (62), Expect = 0.45
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 80 SGERHIKCEVCSLALLSKSHLKQHMRVHTGER 111
S + KC +C A SKS+LK HM H+ E+
Sbjct: 5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 25.6 bits (55), Expect = 4.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 421 FKCDICGQALTTKPKLNDHMLLHTGEK 447
FKC +C A +K L HM H+ EK
Sbjct: 10 FKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 25.2 bits (54), Expect = 6.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMHN 221
+PF C +C R+K++L H+ H+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHS 33
Score = 25.2 bits (54), Expect = 6.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHN 324
+PF C +C R+K++L H+ H+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHS 33
Score = 25.2 bits (54), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
PF C C + K+ L+ H+ H+ EK
Sbjct: 9 PFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 25.2 bits (54), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
PF C C + K+ L+ H+ H+ EK
Sbjct: 9 PFKCSLCEYATRSKSNLKAHMNRHSTEK 36
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti;
transcription, mRNA, multiprotein complex; HET: UTP;
2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1
PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I
1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I*
1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Length = 122
Score = 30.2 bits (67), Expect = 0.63
Identities = 18/133 (13%), Positives = 32/133 (24%), Gaps = 29/133 (21%)
Query: 155 NISFLTGAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLL 214
N+ + +E L+ EC TC S L + +++
Sbjct: 12 NMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIG----------ETAGVVQD 61
Query: 215 VHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHE 274
+ C C+ Q R R M L
Sbjct: 62 IGSDPTLPRSDRECPKCH---------------SRENVFFQSQQR----RKDTSMVLFFV 102
Query: 275 CPTCGKKWRTRSE 287
C +C + + +
Sbjct: 103 CLSCSHIFTSDQK 115
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 29.1 bits (65), Expect = 0.71
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 198 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKT 239
F C CG+ + K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWGDD 51
Score = 29.1 bits (65), Expect = 0.71
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 301 FVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKT 342
F C CG+ + K + HV +C C K F
Sbjct: 11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWGDD 51
Score = 26.4 bits (58), Expect = 6.8
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 421 FKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARF 458
F C+ CG+++ K ++ H+ + C CG F
Sbjct: 11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDF 47
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H
cell surface, transport protein; HET: HEC; 1.76A
{Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Length = 874
Score = 31.6 bits (69), Expect = 0.85
Identities = 37/346 (10%), Positives = 74/346 (21%), Gaps = 13/346 (3%)
Query: 59 CDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVC 118
+ + ++ C C + K H+ + E
Sbjct: 417 GNYFHYYATPEIDGIPGVNLVHVFQNGGCASCHAEQGEEGSAKYHLAKANATKLLRTEYA 476
Query: 119 GKRFAKRSNLNAHKKKVTRHTGRDEVPSIKPLKRKRNISFLTGAREGMPLIHECPTCGKK 178
K ++ + T + D P P ++ +S +
Sbjct: 477 YKLENGTFDVAKGELTFTVNWHSDVAPHQDPKVKEFWVSLTAFNGTEYTMGPRPSNGTLG 536
Query: 179 WRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQK 238
K ++ + + T T + + P+
Sbjct: 537 RSENRISVNLAKVETN--ANLTAVPNGSKVTYTLTGIKAVIGTSSVPYKQIVSIGKGFMD 594
Query: 239 TGLERHLTIHNNEKKHQVSGRFSFNRAREGMPLIHECPTCGKKWRTRSELNKHTKTHSDL 298
L + + S A I+E K ++ + T +
Sbjct: 595 GKLLICANSAELDPTMDAAIDCSNTEA-----PIYEVIVGSNKASFSADASNVTARSIVI 649
Query: 299 RPFVCEIC--GQGYRTKTHLLVHVGMHNGIHPFTCHFCNKSFTQKTGLERHLTIHNNEKK 356
C C + + +H L H TCH + + HN
Sbjct: 650 SEAKCANCHGEKADFSASHALTHAADKPDNSCGTCHSAVPNTAVALADGSCVACHNGAPA 709
Query: 357 HQSGRRQK----RNQQHDRQRSESDTTLAEEDNLFHSTPIFQCHLC 398
H ++ + H D C C
Sbjct: 710 HSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPENPANCAAC 755
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.9 bits (61), Expect = 0.86
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 418 ERRFKCDICGQALTTKPKLNDHMLLHTGE 446
+ CD+CG+ +K L H LLHT +
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 27.1 bits (59), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 395 CHLCGRCFNSPTTLTQHKIVHTGE 418
C +CG+ F S TL HK++HT +
Sbjct: 12 CDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 25.9 bits (56), Expect = 3.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 110 ERPHECEVCGKRFAKRSNLNAHK 132
+ H C++CGK+F + L +HK
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHK 29
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 27.2 bits (60), Expect = 1.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLRP 197
CP C K++ L+KH H L
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 27.2 bits (60), Expect = 1.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLRP 300
CP C K++ L+KH H L
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.9 bits (54), Expect = 7.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEKK 253
F C C K F + L +H+T+H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.9 bits (54), Expect = 7.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKK 356
F C C K F + L +H+T+H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 30.1 bits (67), Expect = 1.1
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 3/97 (3%)
Query: 38 CNTEPGMPDSLLINEIAKYT-RCDLCGKGFIHLKSYQIHKMIHSGERHIKCEVCSLALLS 96
PD+ EI +C G + H + C C
Sbjct: 63 LLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQ-RPFQ 121
Query: 97 KSHLKQHMRVHTGERPHECEVCGKRFAKRSNLNAHKK 133
K H+ H+ R C+ C + H +
Sbjct: 122 KFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQ 157
Score = 29.7 bits (66), Expect = 1.3
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 168 LIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 227
L+ +CP G + + + H + C C + ++ K H+ +H+ +
Sbjct: 81 LMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQ-KFHINIHILKDCPRRQVS 139
Query: 228 CHFCNKSFTQKTGLERHLTI 247
C C S + E H
Sbjct: 140 CDNCAASMAFED-KEIHDQN 158
Score = 29.7 bits (66), Expect = 1.3
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 271 LIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEICGQGYRTKTHLLVHVGMHNGIHPFT 330
L+ +CP G + + + H + C C + ++ K H+ +H+ +
Sbjct: 81 LMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQ-KFHINIHILKDCPRRQVS 139
Query: 331 CHFCNKSFTQKTGLERHLTI 350
C C S + E H
Sbjct: 140 CDNCAASMAFED-KEIHDQN 158
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 26.8 bits (59), Expect = 1.7
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 171 ECPTCGKKWRTRSELNKHTKTHSDLR 196
CP C K++ L H H + +
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.8 bits (59), Expect = 1.7
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 274 ECPTCGKKWRTRSELNKHTKTHSDLR 299
CP C K++ L H H + +
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENKK 29
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 26.7 bits (58), Expect = 1.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 196 RPFVCEICGQGYRTKTHLLVHVGMHNG 222
+P C +CG+ + + L+ HV H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 26.7 bits (58), Expect = 1.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 299 RPFVCEICGQGYRTKTHLLVHVGMHNG 325
+P C +CG+ + + L+ HV H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 25.9 bits (56), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 394 QCHLCGRCFNSPTTLTQHKIVHTGER 419
QC +CG+ F ++L H HTGE+
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.5 bits (55), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 423 CDICGQALTTKPKLNDHMLLHTGEK 447
C +CG+A T L H+ HTGEK
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.5 bits (55), Expect = 4.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 225 PFTCHFCNKSFTQKTGLERHLTIHNNEK 252
P C C K+FTQ + L H+ H EK
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.5 bits (55), Expect = 4.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 328 PFTCHFCNKSFTQKTGLERHLTIHNNEK 355
P C C K+FTQ + L H+ H EK
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 26.6 bits (59), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 226 FTCHFCNKSFTQKTGLERHLTIHNNEK 252
+TC FC + F L H+ +H ++
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 26.6 bits (59), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEK 355
+TC FC + F L H+ +H ++
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 25.9 bits (57), Expect = 4.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 392 IFQCHLCGRCFNSPTTLTQHKIVHTGER 419
+ C C R F S L H VH +R
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHRRDR 33
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 26.3 bits (57), Expect = 2.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 111 RPHECEVCGKRFAKRSNLNAHKK 133
RP+ C VCGKRF+ + + H +
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYR 24
Score = 26.3 bits (57), Expect = 2.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 447 KPHECNVCGARFAKKWNMQVH 467
+P+ C+VCG RF+ K M+ H
Sbjct: 2 RPYSCSVCGKRFSLKHQMETH 22
Score = 24.4 bits (52), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 223 IHPFTCHFCNKSFTQKTGLERHLTIH 248
+ P++C C K F+ K +E H +H
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVH 26
Score = 24.4 bits (52), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 326 IHPFTCHFCNKSFTQKTGLERHLTIH 351
+ P++C C K F+ K +E H +H
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVH 26
>4ayb_A DNA-directed RNA polymerase; transferase, multi-subunit,
transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_A
2y0s_A 2waq_A 4b1o_A 4b1p_W 2pmz_A 3hkz_A
Length = 880
Score = 30.2 bits (68), Expect = 2.2
Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 19/124 (15%)
Query: 196 RPFVCEICGQGYRT-KTHL--------LVHVGMHNGIHPF---TCHFCNKSFTQKTGLER 243
C CG H ++HVG ++ F TC C + + +E+
Sbjct: 54 PGQKCPTCGNTLGNCPGHFGHIELVRPVIHVGFVKHVYEFLKATCRRCGRVKISEDEIEK 113
Query: 244 HLTIHNNEKKHQVSGRF-SFNRAREGMPLIHECPTCG------KKWRTRSELNKHTKTHS 296
+ I+N KK S ++ CP CG K + + + + +
Sbjct: 114 YSRIYNAIKKRWPSAARRLTEYVKKTAMKAQVCPHCGEKQFKIKLEKPYNFYEERKEGVA 173
Query: 297 DLRP 300
L P
Sbjct: 174 KLTP 177
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 27.6 bits (61), Expect = 2.3
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 69 LKSYQIHKMIHSGERHIKCEVCSLALLSKSHLKQHMRVHTGERPHECEVCGKRFAKRSNL 128
H+ R C+ C L L S LK+H + G R C CG+ + +L
Sbjct: 2 SSGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHED-YCGARTELCGNCGRNVLVK-DL 58
Query: 129 NAHKKKVTR 137
H + R
Sbjct: 59 KTHPEVCGR 67
Score = 26.1 bits (57), Expect = 7.9
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 408 LTQHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAKKWNMQVH 467
+ H+ R C C L+ KL +H + G + C CG K +++ H
Sbjct: 5 SSGHEETECPLRLAVCQHCDLELSIL-KLKEH-EDYCGARTELCGNCGRNVLVK-DLKTH 61
Query: 468 KQKVHG 473
+
Sbjct: 62 PEVCGR 67
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon,
hyperthermophilic, extremophIle; NMR {Thermococcus
celer} SCOP: g.41.3.1
Length = 57
Score = 26.7 bits (59), Expect = 2.8
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 264 RAREGMPLIHECPTCGKKWR 283
E + ++C CG WR
Sbjct: 35 AGDEPSTIFYKCTKCGHTWR 54
Score = 25.9 bits (57), Expect = 5.1
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 162 AREGMPLIHECPTCGKKWR 180
E + ++C CG WR
Sbjct: 36 GDEPSTIFYKCTKCGHTWR 54
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding
protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB:
2ab7_A
Length = 29
Score = 26.2 bits (57), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 392 IFQCHL--CGRCFNSPTTLTQHKIVHTG 417
++ CH CGR FN L +HK +HTG
Sbjct: 2 VYVCHFENCGRSFNDRRKLNRHKKIHTG 29
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein,
abnormal nuclear; zinc-finger, beta barrel, VWA domain,
gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP:
a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Length = 926
Score = 29.4 bits (65), Expect = 3.2
Identities = 8/51 (15%), Positives = 16/51 (31%)
Query: 378 TTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQ 428
+ P+ + L RC + + RR++C+ C
Sbjct: 208 RPYQHLYDDIDPPPLNEDGLIVRCRRCRSYMNPFVTFIEQGRRWRCNFCRL 258
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 25.8 bits (56), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 171 ECPTCGKKWRTRSELNKHTKT 191
CP C K++ L+KH KT
Sbjct: 4 ACPACPKRFMRSDALSKHIKT 24
Score = 25.8 bits (56), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 274 ECPTCGKKWRTRSELNKHTKT 294
CP C K++ L+KH KT
Sbjct: 4 ACPACPKRFMRSDALSKHIKT 24
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.5 bits (63), Expect = 4.5
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 9/34 (26%)
Query: 172 CPTCGK-KWRTRSELNKHTKTHSDLRPFVCEICG 204
CP C + + D+ VC +CG
Sbjct: 24 CPECKVYPPKIVER-----FSEGDV---VCALCG 49
Score = 28.5 bits (63), Expect = 4.5
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 9/34 (26%)
Query: 275 CPTCGK-KWRTRSELNKHTKTHSDLRPFVCEICG 307
CP C + + D+ VC +CG
Sbjct: 24 CPECKVYPPKIVER-----FSEGDV---VCALCG 49
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing,
spliceosome, RNA-binding domain, SM fold, finger, RNA
recognition motif, 5' splice site; 5.49A {Homo sapiens}
PDB: 1uw2_A 2vrd_A
Length = 77
Score = 26.5 bits (58), Expect = 6.0
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Query: 329 FTCHFCNKSFTQKTGLERHLTIHNNEKKHQSGRRQKRN 366
F C +C+ T + R K H SGR+ K N
Sbjct: 4 FYCDYCDTYLTHDSPSVR--------KTHCSGRKHKEN 33
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4
tetrahedral Zn+2, antiparallel beta strand and alpha
helix, NESG project; NMR {Escherichia coli} SCOP:
g.39.1.9
Length = 68
Score = 26.0 bits (57), Expect = 6.3
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Query: 167 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEIC 203
+ CPTCGK E++ RPF + C
Sbjct: 7 TITVNCPTCGKT-VVWGEISPF-------RPFCSKRC 35
Score = 26.0 bits (57), Expect = 6.3
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Query: 270 PLIHECPTCGKKWRTRSELNKHTKTHSDLRPFVCEIC 306
+ CPTCGK E++ RPF + C
Sbjct: 7 TITVNCPTCGKT-VVWGEISPF-------RPFCSKRC 35
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron
transfer, DIIR center, oxidoreductase; 1.40A
{Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1
PDB: 1yv1_A 1yux_A
Length = 202
Score = 27.8 bits (61), Expect = 6.4
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 13/51 (25%)
Query: 410 QHKIVHTGERRFKCDICGQALTTKPKLNDHMLLHTGEKPHECNVCGARFAK 460
++ C ICG +H GE +C +C
Sbjct: 161 NDIDAPDDDKFHLCPICGY-------------IHKGEDFEKCPICFRPKDT 198
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint
center for structural genomics, JCSG, protein structu
initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium
rectale}
Length = 373
Score = 28.3 bits (63), Expect = 7.0
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 12 KIYLLVIDEKVLIVRKLVDNGHKIFLCNTEPGMPDSLLINEIAKYTRCD 60
+I +L+ +E I + + PG+ I KY R D
Sbjct: 68 RIDVLIAEEDFNIDKSEFKRNCGLAYFTGTPGIELIKDEIAICKYQRVD 116
>2y0f_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase,
isoprenoid biosynthesis, non-mevalonate PATH; 2.50A
{Thermus thermophilus}
Length = 406
Score = 28.4 bits (64), Expect = 7.0
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 3/25 (12%)
Query: 161 GAREGMPLIHECPTCGKKWRTRSEL 185
G R P + CP CG RT S
Sbjct: 286 GLRAFAPEVTSCPGCG---RTTSTF 307
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 25.0 bits (54), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 111 RPHECEVCGKRFAKRSNLNAH 131
+P+ CE CGKRF + S L H
Sbjct: 1 KPYVCERCGKRFVQSSQLANH 21
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae}
SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB:
1pd0_A 1pd1_A
Length = 810
Score = 28.0 bits (61), Expect = 8.3
Identities = 8/51 (15%), Positives = 16/51 (31%)
Query: 378 TTLAEEDNLFHSTPIFQCHLCGRCFNSPTTLTQHKIVHTGERRFKCDICGQ 428
+ P+ + L RC + + RR++C+ C
Sbjct: 92 RPYQHLYDDIDPPPLNEDGLIVRCRRCRSYMNPFVTFIEQGRRWRCNFCRL 142
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI,
protein structure initiative; 1.80A {Sulfolobus
solfataricus P2} SCOP: b.40.4.15 PDB: 3irb_A
Length = 145
Score = 27.2 bits (60), Expect = 8.8
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 158 FLTGAREGMPLIHECPTCGK 177
F G ++ + +C CG+
Sbjct: 36 FFNGLKQNKIIGSKCSKCGR 55
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid
dehydrogenase, cofactor regenerator, yeast, CBFDH; HET:
PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Length = 364
Score = 27.7 bits (62), Expect = 9.9
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 4 AGKNNNLVKIYLLVIDEKVLIVRKLVDNGHKIFLCNTEPGMPDSLLINEIAKY 56
AGK+ + + K+ I L D GH++ + ++ +S+L I
Sbjct: 10 AGKHAADEEKLYGCTENKLGIANWLKDQGHEL-ITTSDKEGGNSVLDQHIPDA 61
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.136 0.436
Gapped
Lambda K H
0.267 0.0569 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,581,746
Number of extensions: 436332
Number of successful extensions: 4181
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3488
Number of HSP's successfully gapped: 1841
Length of query: 514
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 416
Effective length of database: 3,965,535
Effective search space: 1649662560
Effective search space used: 1649662560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (26.9 bits)