BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11036
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XGE2|UTP15_XENTR U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus
tropicalis GN=utp15 PE=2 SV=1
Length = 515
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 15/153 (9%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDIP+ +++++ HT DY+R G S +++D+ +GSYD T+ ++D
Sbjct: 148 LWDIPNGVEITSYNEHT--------------DYIRCGCTSALNNDLFATGSYDHTIKIFD 193
Query: 72 TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 131
R+ VMS++HG PVESVL PSGG+ V+ GG V +WD+L GG+LL HHKTVTS
Sbjct: 194 GRTDKSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLVSLRNHHKTVTS 253
Query: 132 LCLASGGKRLISASLDHHAKIYE-MTLKTVSSF 163
LCL+S G+RL+SASLD H K+Y M K V SF
Sbjct: 254 LCLSSSGQRLLSASLDRHVKVYSTMNYKVVHSF 286
>sp|Q8TED0|UTP15_HUMAN U3 small nucleolar RNA-associated protein 15 homolog OS=Homo
sapiens GN=UTP15 PE=1 SV=3
Length = 518
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 97/155 (62%), Gaps = 15/155 (9%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ I+GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFITGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ + V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
>sp|A7MB12|UTP15_BOVIN U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus
GN=UTP15 PE=2 SV=1
Length = 519
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 97/155 (62%), Gaps = 15/155 (9%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S +++D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNTDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
>sp|Q5F3D7|UTP15_CHICK U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus
gallus GN=UTP15 PE=2 SV=1
Length = 520
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 97/155 (62%), Gaps = 15/155 (9%)
Query: 11 ALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY 70
+LWDIPS ++ +++ H+ DYVR G S ++ D+ I+GSYD TV V+
Sbjct: 147 SLWDIPSATEIVSYSEHS--------------DYVRCGCASKLNGDVFITGSYDHTVKVF 192
Query: 71 DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVT 130
D R+ VM++ HG PVESVL PSGG+ V+ GG V +WD+L GG+LL HHKTVT
Sbjct: 193 DARTKSSVMTIEHGHPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVT 252
Query: 131 SLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFT 164
LCL S G+RL+S SLD H KIY T K V SF
Sbjct: 253 CLCLNSSGQRLLSGSLDRHVKIYSTTSYKVVHSFN 287
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC--IWDMLG 114
++++GS + ++ ++D P+ + + V+ S + GG D +WD+
Sbjct: 94 LLVAGSEEGSIRLFDISGRAPLRQFDGHTKAVHVVGFLSDKYRIFSGGDDYSSSLWDIPS 153
Query: 115 GGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKT----------VSSF 163
+++ ++ H V C + G I+ S DH K+++ K+ V S
Sbjct: 154 ATEIV-SYSEHSDYVRCGCASKLNGDVFITGSYDHTVKVFDARTKSSVMTIEHGHPVESV 212
Query: 164 -----------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
GG V +WD+L GG+LL HHKTVT LCL S G+RL+S SLD H
Sbjct: 213 LLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHV 272
Query: 213 KIYEMVNFSPVHTLDYPSPVLSIDVS 238
KIY ++ VH+ +Y + +LS+ +S
Sbjct: 273 KIYSTTSYKVVHSFNYATSILSLALS 298
>sp|Q7ZXZ2|UTP15_XENLA U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus
laevis GN=utp15 PE=2 SV=1
Length = 515
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 15/153 (9%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDIP+ +++++ HT DY+R G S +++D+ +GSYD T+ V+D
Sbjct: 148 LWDIPNGIEIASYKEHT--------------DYIRCGCTSSLNNDLFATGSYDHTIKVFD 193
Query: 72 TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 131
R+ VMS++HG PVESVL PSGG+ V+ GG V +WD+L GG+LL HHKTVT
Sbjct: 194 GRTDKSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLVSLRNHHKTVTC 253
Query: 132 LCLASGGKRLISASLDHHAKIYE-MTLKTVSSF 163
LCL+S G+RL+S SLD H K+Y M K V SF
Sbjct: 254 LCLSSSGQRLLSGSLDRHVKVYSTMNYKVVHSF 286
>sp|Q8C7V3|UTP15_MOUSE U3 small nucleolar RNA-associated protein 15 homolog OS=Mus
musculus GN=Utp15 PE=2 SV=1
Length = 528
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 95/155 (61%), Gaps = 15/155 (9%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKI 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+ V HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
>sp|A2RRU3|UTP15_RAT U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus
norvegicus GN=Utp15 PE=2 SV=1
Length = 528
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 15/155 (9%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+ V HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD KIY T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKIYSTTSYKVVHSF 286
>sp|Q5REE0|UTP15_PONAB U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo
abelii GN=UTP15 PE=2 SV=1
Length = 518
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 96/155 (61%), Gaps = 15/155 (9%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ +V TF H+ DYVR G S ++ D+ I+GSYD TV +
Sbjct: 146 VKLWDIPNSKEVLTFKEHS--------------DYVRCGCASKLNPDLFITGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ + V+SV HG PVESVL PSGG+ V+ GG V + DML GG+LL HHKTV
Sbjct: 192 FDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVCDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
>sp|Q7ZW33|UTP15_DANRE U3 small nucleolar RNA-associated protein 15 homolog OS=Danio rerio
GN=utp15 PE=2 SV=1
Length = 517
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 15/156 (9%)
Query: 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
L +WD+ S ++S+ T HT DY+RA S ++ D+ ++GSYD TV
Sbjct: 144 LTCRVWDVASAVELSSITEHT--------------DYIRAIAPSKLNPDVFVTGSYDHTV 189
Query: 68 NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK 127
++D RS + VM++ HG PVE VL PS + V+ GG V +WD+L GG+ L HHK
Sbjct: 190 KMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHK 249
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163
TVT CL+S K L++ASLD H K+Y + K V +F
Sbjct: 250 TVTCACLSSSNK-LLTASLDRHVKVYNSSYKVVHNF 284
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSG---GIFVTGG-GLDVCIWDM 112
V+SGS D T V+D S + S+ H + ++ PS +FVTG V ++D+
Sbjct: 137 VLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIA--PSKLNPDVFVTGSYDHTVKMFDV 194
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172
G ++ H + V + L L+S TGG V +W
Sbjct: 195 RSGNSVMT--MQHGQPVECVLLYPSEALLVS--------------------TGGRYVKVW 232
Query: 173 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPV 232
D+L GG+ L HHKTVT CL+S K L++ASLD H K+Y ++ VH D S +
Sbjct: 233 DLLKGGQQLVSLKNHHKTVTCACLSSSNK-LLTASLDRHVKVYNS-SYKVVHNFDCASSI 290
Query: 233 LSIDVS 238
LS+ V+
Sbjct: 291 LSLAVA 296
>sp|O94365|UTP15_SCHPO U3 small nucleolar RNA-associated protein 15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=utp15 PE=3 SV=1
Length = 494
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 18/149 (12%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V +WD+ + A + H +DYVR T S +S+ ++SG YD T+ +
Sbjct: 148 VKVWDLSTGAVQYDLSGH--------------EDYVR--TASWMSATRLVSGGYDGTIRL 191
Query: 70 YDTRSPDP-VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL-LHKFTCHHK 127
+DTR DP VMS +HG ++ VL + SG ++ GG + +WD++ G + K + H K
Sbjct: 192 WDTRIADPEVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQK 251
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMT 156
++T L + S RL+S LD H KIY ++
Sbjct: 252 SITCLAMNSENTRLLSGGLDGHVKIYNIS 280
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDML 113
++++G V ++D + + +++ H PV P G D V +WD L
Sbjct: 95 LLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWD-L 153
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK--TVSSFT------- 164
G + + + H V + S RL+S D ++++ + V SF+
Sbjct: 154 STGAVQYDLSGHEDYVRTASWMSA-TRLVSGGYDGTIRLWDTRIADPEVMSFSHGEAIDV 212
Query: 165 -------------GGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDH 210
GG + +WD++ G + K + H K++T L + S RL+S LD
Sbjct: 213 VLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDG 272
Query: 211 HAKIYEMVNFSPVHTLDYPSPVLSIDVS 238
H KIY + ++ VH + Y P+LS+ +S
Sbjct: 273 HVKIYNISDWKVVHGMKYSGPILSMGLS 300
>sp|Q04305|UTP15_YEAST U3 small nucleolar RNA-associated protein 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP15 PE=1
SV=1
Length = 513
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 22/153 (14%)
Query: 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
+ LWDI + + P + + DYVR + P + +V +GSYD +
Sbjct: 148 VTRLWDISNAYE-------------PQLELTGATDYVRTLSFIPAAPHLVATGSYDGLIR 194
Query: 69 VYDTRS--PDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH 126
+YDTRS P+ S+NH PVE+V+ + I V+ GG + +WD+ KL + +
Sbjct: 195 LYDTRSSGSTPIYSLNHDQPVENVIAVSPTQI-VSCGGNNFKVWDLTSNKKLYERGNF-N 252
Query: 127 KTVTSLCLASG-----GKRLISASLDHHAKIYE 154
K VT L LI++SLD H K+++
Sbjct: 253 KAVTCLDYVENFDSPMQSALIASSLDGHVKVFD 285
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-----GKRLISASLDHHAKIYE-MV 218
GG + +WD+ KL + + K VT L LI++SLD H K+++ +
Sbjct: 230 GGNNFKVWDLTSNKKLYERGNFN-KAVTCLDYVENFDSPMQSALIASSLDGHVKVFDPLD 288
Query: 219 NFSPVHTLDYPSPVLSIDVS 238
NF + PVLS VS
Sbjct: 289 NFQVKFGWKFSGPVLSCAVS 308
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 63.2 bits (152), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGG 115
+ SGS DKT+ ++ +R ++N H V SV P G +GG + +W
Sbjct: 1087 IASGSLDKTIKLW-SRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQT-SD 1144
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT----LKTVSSFTGGL---- 167
G LL T H +TV ++ + GK L SAS DH K+++ T L T++ + G+
Sbjct: 1145 GTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVR 1204
Query: 168 ---------------DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
V +W GKLL H V SL + GK L SAS D
Sbjct: 1205 FSPDGQTIAAGSEDKTVKLWHR-QDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTI 1263
Query: 213 KIYEMVNFSPVHTL 226
K++ + + V TL
Sbjct: 1264 KLWRIADGKLVKTL 1277
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 81/208 (38%), Gaps = 39/208 (18%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW++ T HT D V + SP I+ S S DKT+ +
Sbjct: 1470 VKLWNVSDGKFKKTLKGHT--------------DEVFWVSFSP-DGKIIASASADKTIRL 1514
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFV-TGGGLDVCIWDMLGGGKLLHKFTCHHK 127
+D+ S + + S+ H V SV P G + T V +W G LLH F+ H
Sbjct: 1515 WDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRS-HDGHLLHTFSGHSN 1573
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V S + G+ + SAS D KI+++ G LL H
Sbjct: 1574 VVYSSSFSPDGRYIASASEDKTVKIWQID---------------------GHLLTTLPQH 1612
Query: 188 HKTVTSLCLASGGKRLISASLDHHAKIY 215
V S + GK LIS SLD KI+
Sbjct: 1613 QAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 60 SGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK 117
S S D ++ ++DT S +M++ H + V +V P G G V +W GK
Sbjct: 1172 SASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHR-QDGK 1230
Query: 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177
LL H V SL + GK L SAS D K++ +
Sbjct: 1231 LLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWR--------------------IAD 1270
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
GKL+ H+ +V + +S GK + SAS D+ K++
Sbjct: 1271 GKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 95/256 (37%), Gaps = 47/256 (18%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LW + + T + IY + TPQ D++ S + DKTV +
Sbjct: 1387 IQLWHSQDGSLLKTLPGNKAIYGISF----TPQ------------GDLIASANADKTVKI 1430
Query: 70 YDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFTCHHK 127
+ R + + + H + V V P G + + V +W+ + GK H
Sbjct: 1431 WRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWN-VSDGKFKKTLKGHTD 1489
Query: 128 TVTSLCLASGGKRLISASLD-------------------HHAKIYEMTLK----TVSSFT 164
V + + GK + SAS D H+ +Y + ++S +
Sbjct: 1490 EVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTS 1549
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE----MVNF 220
V +W G LLH F+ H V S + G+ + SAS D KI++ ++
Sbjct: 1550 ADKTVKLWRS-HDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTT 1608
Query: 221 SPVHTLDYPSPVLSID 236
P H S + S D
Sbjct: 1609 LPQHQAGVMSAIFSPD 1624
Score = 37.4 bits (85), Expect = 0.097, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 23/164 (14%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGL-DVCIWDML 113
S+I+ S S D T+ ++ P+ + S V +V L G I T G ++ +W
Sbjct: 1334 SNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQ 1393
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWD 173
G L K +K + + G + SA+ D KI+ +
Sbjct: 1394 DGSLL--KTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVR----------------- 1434
Query: 174 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
GK L H V + + GK L SAS D+ K++ +
Sbjct: 1435 ---DGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNV 1475
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 10 VALWDIPSEAQVSTFTNHTT-IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
+ +WDI + T H IY + D+ + G ++SGS D+TV
Sbjct: 370 IRIWDIAQKRVYRLLTGHEQEIYSL---------DFSKDGKT-------LVSGSGDRTVC 413
Query: 69 VYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
++D + + + ++ V +V+ P G F+ G LD I G L+ + H ++
Sbjct: 414 LWDVEAGEQKLILHTDDGVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTLVEQLHGHEES 472
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188
V S+ + GK L+S SLD+ K++E L+ VS+ + GG FT H
Sbjct: 473 VYSVAFSPDGKYLVSGSLDNTIKLWE--LQCVSNVAPSM------YKEGGICKQTFTGHK 524
Query: 189 KTVTSLCLASGGKRLISASLDHHAKIY 215
+ S+ ++ GK +IS S D + +
Sbjct: 525 DFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFV 100
+D++ + TVSP +ISGS D+T+ + SP +++ H + V SV P+G F
Sbjct: 524 KDFILSVTVSP-DGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFA 582
Query: 101 TGGG-LDVCIW 110
TG G L IW
Sbjct: 583 TGSGDLRARIW 593
>sp|P41318|LST8_YEAST Target of rapamycin complex subunit LST8 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LST8 PE=1
SV=1
Length = 303
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 48 GTVSPVS----SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVT-G 102
G V+ VS + +++ S D T+ V+D RSP + H +PV V+ P+ G ++
Sbjct: 76 GNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGELISCD 135
Query: 103 GGLDVCIWDMLGGGKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161
++ IWD LG + H+ T T + SL +AS G L +A+ + ++EM T +
Sbjct: 136 RDGNIRIWD-LGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDA 194
Query: 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-VNF 220
S K + KF H +T + L+S K L + S DH A+++ + +F
Sbjct: 195 SHL--------------KPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDF 240
Query: 221 SPVHTLD 227
TLD
Sbjct: 241 KLETTLD 247
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 62.4 bits (150), Expect = 3e-09, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 89/220 (40%), Gaps = 38/220 (17%)
Query: 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
IV LWDI S+ + T HT ++V A SP + + SGS D+TV
Sbjct: 1139 IVRLWDISSKKCLYTLQGHT--------------NWVNAVAFSPDGATLA-SGSGDQTVR 1183
Query: 69 VYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHH 126
++D S + + H S V SV+ P G +G V +W+ + K L F H
Sbjct: 1184 LWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE-INSSKCLCTFQGHT 1242
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186
V S+ G L S S D KTV +WD + K LH F
Sbjct: 1243 SWVNSVVFNPDGSMLASGSSD----------KTVR---------LWD-ISSSKCLHTFQG 1282
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
H V S+ G L S S D +++E+ + +HT
Sbjct: 1283 HTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTF 1322
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW+I S + TF HT+ +V + T SP ++ SGS D+TV +
Sbjct: 1308 VRLWEISSSKCLHTFQGHTS--------------WVSSVTFSP-DGTMLASGSDDQTVRL 1352
Query: 70 YDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHK 127
+ S + + + + H + V SV+ P G I +G G V +W + GK L+ H+
Sbjct: 1353 WSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWS-ISSGKCLYTLQGHNN 1411
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V S+ + G L S S D +++ ++ G+ L+ H
Sbjct: 1412 WVGSIVFSPDGTLLASGSDDQTVRLWNIS--------------------SGECLYTLHGH 1451
Query: 188 HKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
+V S+ +S G L S S D K++++ + TL
Sbjct: 1452 INSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 46/235 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD--IVISGSYDKTV 67
V LWDI S F HT+ + + SSD ++ SGS D+TV
Sbjct: 1014 VRLWDISSSQCFYIFQGHTSCVRSVVF-----------------SSDGAMLASGSDDQTV 1056
Query: 68 NVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCH 125
++D S + + ++ H S V SV+ P G + +GG + +WD + G L+ +
Sbjct: 1057 RLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD-ISSGNCLYTLQGY 1115
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-----------------------TVSS 162
V L + G L + S D ++++++ K T++S
Sbjct: 1116 TSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLAS 1175
Query: 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+G V +WD + K L+ H V S+ G L S S D +++E+
Sbjct: 1176 GSGDQTVRLWD-ISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEI 1229
Score = 55.1 bits (131), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDI S + TF HT+ VR+ SP +S ++ SGS D+TV +
Sbjct: 930 VRLWDISSGQCLKTFKGHTS--------------RVRSVVFSP-NSLMLASGSSDQTVRL 974
Query: 70 YDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHK 127
+D S + + + H V SV G + TG G V +WD + + + F H
Sbjct: 975 WDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD-ISSSQCFYIFQGHTS 1033
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V S+ +S G L S S D + +WD + G L+ H
Sbjct: 1034 CVRSVVFSSDGAMLASGSDDQTVR-------------------LWD-ISSGNCLYTLQGH 1073
Query: 188 HKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
V S+ + G L S D +++++ + + ++TL
Sbjct: 1074 TSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTL 1112
Score = 39.7 bits (91), Expect = 0.019, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 32/151 (21%)
Query: 94 PSGGIFVTG--GGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHH 149
P G +F TG GG+ V W+ G +LL TC H+ V S+ + GK L S S D
Sbjct: 874 PDGKLFATGDSGGI-VRFWEAATGKELL---TCKGHNSWVNSVGFSQDGKMLASGSDDQT 929
Query: 150 AKIYEMT----LKTVSSFT-----------------GGLD--VCIWDMLGGGKLLHKFTC 186
++++++ LKT T G D V +WD + G+ L+ F
Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWD-ISSGECLYIFQG 988
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
H V S+ G L + S D +++++
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQTVRLWDI 1019
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 9 IVALWDIPSEAQVSTFTNHTT-IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
++ +WDI S +TF H IY + D+ R G + SGS D+TV
Sbjct: 367 LIRVWDIQSRTIRNTFHGHEQDIYSL---------DFSRDGRT-------IASGSGDRTV 410
Query: 68 NVYD--TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG-GKLLHKF 122
++D T V+S+ G V +V P FV G LD V +WDM G + L
Sbjct: 411 RLWDIETGQNTSVLSIEDG--VTTVAISPDKQ-FVAAGSLDKSVRVWDMRGYLAERLEGP 467
Query: 123 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLDVCIWDMLGGGKLL 181
H +V S+ + G+ L+S SLD K++E++ + + S GG+ +
Sbjct: 468 DGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSA---------PPKGGRCI 518
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
F H V S+ L + ++S S D + ++
Sbjct: 519 KTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWD 553
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 91 LCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 148
+C G ++ G D + +WD + + + F H + + SL + G+ + S S D
Sbjct: 350 VCFSPDGKYLATGAEDKLIRVWD-IQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDR 408
Query: 149 HAKIYEMTLKTVSSF--------------------TGGLD--VCIWDMLGG-GKLLHKFT 185
+++++ +S G LD V +WDM G + L
Sbjct: 409 TVRLWDIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPD 468
Query: 186 CHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
H +V S+ + G+ L+S SLD K++E+
Sbjct: 469 GHKDSVYSVAFSPDGRNLVSGSLDKTIKMWEL 500
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S +V T T H + ++ + + T S D +I+GS+D TV V+D
Sbjct: 203 LWDIQSGEEVVTLTGH--LAEIISLSFDT-------------SGDRIITGSFDHTVVVWD 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S L + +TG C +WD G K + T H +
Sbjct: 248 ASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG-KCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
C GK + +AS D A++Y T + K + K H
Sbjct: 307 LDSCFDYTGKLIATASADGTARVYNATTR--------------------KCITKLEGHEG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
++ + G RL++ S D A+I+++ + L+
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE 384
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 27/188 (14%)
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL--PSGGIFVTGGGLDVCIWDMLGGG 116
I+GSYD+T V+DT S + + ++ V + P G TG C G
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176
K H F H + L + + S+D AK +WD+
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAK-------------------LWDIQS 208
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-----DYPSP 231
G +++ T H + SL + G R+I+ S DH +++ VHTL + S
Sbjct: 209 GEEVV-TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA 267
Query: 232 VLSIDVSM 239
+ S D S+
Sbjct: 268 LFSWDCSL 275
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 46/227 (20%)
Query: 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
+V ++D+ S V T HT +YV +P S ++ SGS+D+T+
Sbjct: 171 LVKVFDVSSGRCVKTLKGHT--------------NYVFCCCFNP-SGTLIASGSFDETIR 215
Query: 69 VYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCH 125
++ R+ + + S+ H PV SV C G ++ G D V IWD G +
Sbjct: 216 IWCARNGNTIFSIPGHEDPVSSV-CFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEE 274
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185
H +T + + GK +++++L++ TLK +WD ++L ++T
Sbjct: 275 HPPITHVKFSPNGKYILASNLNN-------TLK------------LWDYQ-KLRVLKEYT 314
Query: 186 CHHKTVTSLCLAS-----GGKRLISASLDHHAKIYEMVNFSPVHTLD 227
H + C+A+ GGK ++S S DH I+ + + TLD
Sbjct: 315 GHEN--SKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLD 359
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLG 114
+V SGS D++ ++DTRS H PV SV C + GG+D + +WD+
Sbjct: 162 LVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSV-CFSDASDQLITGGIDNVIRVWDIRN 220
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-----LKTVSSFTGGLD 168
L+ H T+TS ++ G L+S S+D+ KI+++ + + +F G +
Sbjct: 221 QEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQN 279
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 27/189 (14%)
Query: 60 SGSYDKTV---NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG 116
SG DK + NVY V+ + G+ +E S I+ + +WD G
Sbjct: 79 SGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDS-NKG 137
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMTLKTVSSF------------ 163
+L+ + H V S C A G L+ S S D A+I++ K +
Sbjct: 138 ELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCF 197
Query: 164 --------TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213
TGG+D + +WD+ L+ H T+TS ++ G L+S S+D+ K
Sbjct: 198 SDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 214 IYEMVNFSP 222
I+++ ++P
Sbjct: 258 IWDIRPYAP 266
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 13 WDIPSEAQVSTFTNHT-TIYKVPLMLYSTP----QDYVRAGTVSPVSSDIVISGSYDKTV 67
W S++ V+ + T IY+VP + + +YV +P SS +V+SGS+D++V
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDESV 187
Query: 68 NVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTC 124
++D R+ V ++ H PV S + G +T G D V IWD G +
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPV-SAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF 184
+ V + + GK ++S++LD+ TLK +WD G GK L ++
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDN-------TLK------------LWD-FGKGKTLKQY 286
Query: 185 TCHHKTVTSLCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
H C+ +GGK +IS S D ++ + V +L+
Sbjct: 287 QGHEN--NKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLE 332
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWD 173
G KL+ H K+++++ + GK L ++S D KI+ M+ D+
Sbjct: 67 AGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS-----------DLSCER 115
Query: 174 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
L G KL V ++ K +++AS D KIYE+ TL
Sbjct: 116 TLTGHKL---------GVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTL 159
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGG 115
V SGS DKT+ ++D S ++ HG V+SV P G +G + IWD
Sbjct: 898 VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDA-AS 956
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT---------------- 159
G H +V S+ + G+R+ S S D KI++ T
Sbjct: 957 GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVA 1016
Query: 160 -------VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
V+S + + IWD G H V S+ + G+R+ S S DH
Sbjct: 1017 FSPDGQRVASGSDDKTIKIWDT-ASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTI 1075
Query: 213 KIYEMVNFSPVHTLD 227
KI++ V+ + TL+
Sbjct: 1076 KIWDAVSGTCTQTLE 1090
Score = 54.7 bits (130), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGG 115
V SGS DKT+ ++DT S ++ HG V+SV+ P G +G + IWD + G
Sbjct: 1024 VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSG 1083
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175
H +V S+ + G+R+ S S+D KI++ T C +
Sbjct: 1084 -TCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGT----------CTQTLE 1132
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
G G +H S+ + G+R+ S S+D KI++ + + TL+
Sbjct: 1133 GHGGWVH----------SVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE 1174
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 27/195 (13%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG 115
V SGS DKT+ ++DT S ++ HG V SV P +G + IWD
Sbjct: 856 VASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDA-AS 914
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT---------------- 159
G H V S+ + G+R+ S S DH KI++ T
Sbjct: 915 GTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVA 974
Query: 160 -------VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
V+S +G + IWD G H +V S+ + G+R+ S S D
Sbjct: 975 FSPDGQRVASGSGDKTIKIWDT-ASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTI 1033
Query: 213 KIYEMVNFSPVHTLD 227
KI++ + + TL+
Sbjct: 1034 KIWDTASGTCTQTLE 1048
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 96/257 (37%), Gaps = 46/257 (17%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WD S T H +V++ SP V SGS D T+ +
Sbjct: 1033 IKIWDTASGTCTQTLEGHG--------------GWVQSVVFSP-DGQRVASGSDDHTIKI 1077
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D S ++ HG V SV P G V G +D + IWD G H
Sbjct: 1078 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQ-RVASGSIDGTIKIWDA-ASGTCTQTLEGHG 1135
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTLKT-----------------------VSSF 163
V S+ + G+R+ S S+D KI++ T V+S
Sbjct: 1136 GWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASG 1195
Query: 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
+ + IWD G H V S+ + G+R+ S S D+ KI++ + +
Sbjct: 1196 SSDKTIKIWDT-ASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCT 1254
Query: 224 HTLDYPSPV--LSIDVS 238
TL+ S LS D +
Sbjct: 1255 QTLNVGSTATCLSFDYT 1271
Score = 37.7 bits (86), Expect = 0.064, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 25/138 (18%)
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT-----------------------VS 161
H +V S+ ++ G+R+ S S D KI++ T V+
Sbjct: 840 HGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVA 899
Query: 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
S + + IWD G H V S+ + G+R+ S S DH KI++ + +
Sbjct: 900 SGSDDKTIKIWDA-ASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGT 958
Query: 222 PVHTLD-YPSPVLSIDVS 238
TL+ + S VLS+ S
Sbjct: 959 CTQTLEGHGSSVLSVAFS 976
>sp|Q6ZMY6|WDR88_HUMAN WD repeat-containing protein 88 OS=Homo sapiens GN=WDR88 PE=2 SV=2
Length = 472
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWD + V F + K P++ S D R VI+ SYDKTV
Sbjct: 126 VKLWDPVDGSVVRDFEHRP---KAPVVECSITGDSSR-----------VIAASYDKTVRA 171
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHK 127
+D + + V + + + S P G V+G +D +CI D + H +
Sbjct: 172 WDLETGKLLWKVRYDTFIVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTR 231
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
++TS C +R+ S SLD K IWD+ LL H
Sbjct: 232 SITSCCFDPDSQRVASVSLDRCIK-------------------IWDVTSQATLLTITKAH 272
Query: 188 HKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+++ C G L ++S D + KI+ +
Sbjct: 273 SNAISNCCFTFSGHFLCTSSWDKNLKIWNV 302
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 31/220 (14%)
Query: 15 IPSEAQVST---FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
+P + QV + + + K+P + S + V V ++SGSYD TV ++D
Sbjct: 72 LPEKHQVPEKLIWGDQDPLSKIPFKILSGHEHAVSTCHFC-VDDTKLLSGSYDCTVKLWD 130
Query: 72 TRSPDPVMSVNHGSPVESVLCLPSGG---IFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
V H V C +G + V WD L GKLL K +
Sbjct: 131 PVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDKTVRAWD-LETGKLLWKVR-YDTF 188
Query: 129 VTSLCLASGGKRLISA-SLDHHAKIYEM-TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186
+ S + GK ++S +DH I + + TVS
Sbjct: 189 IVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDH-------------------- 228
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
H +++TS C +R+ S SLD KI+++ + + + T+
Sbjct: 229 HTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATLLTI 268
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTG---GGLDVCI 109
S +V +G D VN++ P+ +MS+ H +PVESV + + V G G L V
Sbjct: 32 SGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRV-- 89
Query: 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDV 169
WD L K+L H V SL G + S SLD + K
Sbjct: 90 WD-LEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIK------------------ 130
Query: 170 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+WD+ G + ++ H + V L + GK L SAS DH K++++
Sbjct: 131 -LWDVRRKG-CVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL 176
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 40/215 (18%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW + + + T HTT P + VR + +++++GS ++ V
Sbjct: 45 VNLWSVNKPNCIMSLTGHTT-----------PVESVRFNN----AEELIVAGSQSGSLRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCI--WDMLGGGKLLHKFTCHH 126
+D + + ++ H + V S+ P G FV G LD I WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANVCSLDFHPYGD-FVASGSLDTNIKLWDVRRKG-CVFRYKGHT 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186
+ V L + GK L SAS DH K++++T GK++ + +
Sbjct: 148 QAVRCLRFSPDGKWLASASDDHSVKLWDLT--------------------AGKMMAELSE 187
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
H V + L S S D + +++ F
Sbjct: 188 HKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQ 222
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 59 ISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGG 116
+S SYDKT ++ T S + + V H S V+ V P+ TG V +WD + G
Sbjct: 508 VSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG- 566
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176
+ + T H +V+SL ++ G+ L S S+DH ++ IWD L
Sbjct: 567 QSVRLMTGHKGSVSSLAFSACGRYLASGSVDH-------------------NIIIWD-LS 606
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
G L+ H TVT++ + G L +A LD++ +++
Sbjct: 607 NGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDF 647
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIW 110
+S+ V +GS D+TV ++D + V + H V S L + G ++ G +D + IW
Sbjct: 545 NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSS-LAFSACGRYLASGSVDHNIIIW 603
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
D L G L+ H TVT++ + G L +A LD++ +++
Sbjct: 604 D-LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDF 647
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 62/253 (24%)
Query: 10 VALWDIPSEAQVSTFTNHTT-IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
+ LWD+ ++ F+ H IY + D+ G ++SGS D+T
Sbjct: 384 IKLWDLSTQKVRYVFSGHEQDIYSL---------DFSHNGR-------FIVSGSGDRTAR 427
Query: 69 VYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
++D + ++ + + V ++ P+ F+ G LD + +W + G L+ + H
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAISPNDQ-FIAVGSLDQIIRVWSV--SGTLVERLEGHK 484
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTV------------SSFTGGLDVCI-- 171
++V S+ + L+S SLD K++E+ ++V +++TG D +
Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSV 544
Query: 172 --------------------WDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLD 209
WD+ G L TC H +V S+C + G++ S S D
Sbjct: 545 AVSPDSRWGLSGSKDRSMQFWDLQTGQSYL---TCQGHKNSVISVCFSPDGRQFASGSGD 601
Query: 210 HHAKIYEMVNFSP 222
A+I+ + SP
Sbjct: 602 LRARIWSIDPASP 614
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGG 116
I+GSYD+T V+DT S + + ++ H + V ++ P G TG C G
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176
K H F H + L + + S+D AK+ WD+
Sbjct: 168 KCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKL-------------------WDIQS 208
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
G + L + H + SL + G RLI+ S DH ++E+ + +HTL
Sbjct: 209 GEEAL-TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTL 257
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S + T + H ++ + ++T + D +I+GS+D TV+V++
Sbjct: 203 LWDIQSGEEALTLSGHAA--EIISLSFNT-------------TGDRLITGSFDHTVSVWE 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
S + + + H + S + T C +WD L G K + T H V
Sbjct: 248 IPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNG-KCVATLTGHEDEV 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
+ S G+ + +AS D A++Y + + K L K H
Sbjct: 307 LDVTFDSTGQLVATASADGTARVYSASSR--------------------KCLAKLEGHEG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIY 215
++ +C + G R+++AS D ++++
Sbjct: 347 EISKICFNAQGNRILTASSDKTSRLW 372
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 24/149 (16%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD----IVISGSYDK 65
V++W+IPS ++ T H G +S + ++ + S DK
Sbjct: 243 VSVWEIPSGRRIHTLIGH-------------------RGEISSAQFNWDCSLIATASMDK 283
Query: 66 TVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC 124
+ ++D+ + V ++ H V V +G + T K L K
Sbjct: 284 SCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEG 343
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIY 153
H ++ +C + G R+++AS D ++++
Sbjct: 344 HEGEISKICFNAQGNRILTASSDKTSRLW 372
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGG 116
I+GSYD+T V+DT S + + ++ H + V ++ P G TG C G
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176
K H F H + L + + S+D AK +WD+
Sbjct: 168 KCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAK-------------------LWDIQS 208
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
G + L + H + SL + G RLI+ S DH ++E+ + +HTL
Sbjct: 209 GEEAL-TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTL 257
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 38/207 (18%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S + T + H ++ + ++T + D +I+GS+D TV+V++
Sbjct: 203 LWDIQSGEEALTLSGHAA--EIISLSFNT-------------TGDRLITGSFDHTVSVWE 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
S + + + H + S + T C +WD L G K + T H V
Sbjct: 248 IPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNG-KCVATLTGHDDEV 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
+ S G+ + +AS D A++Y + + K L K H
Sbjct: 307 LDVTFDSTGQLVATASADGTARVYSASSR--------------------KCLAKLEGHEG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYE 216
++ +C + G R+++AS D +++++
Sbjct: 347 EISKICFNAQGNRIVTASSDKTSRLWD 373
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD----IVISGSYDK 65
V++W+IPS ++ T H G +S + ++ + S DK
Sbjct: 243 VSVWEIPSGRRIHTLIGH-------------------RGEISSAQFNWDCSLIATASMDK 283
Query: 66 TVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC 124
+ ++D+ + V ++ H V V +G + T K L K
Sbjct: 284 SCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEG 343
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYE 154
H ++ +C + G R+++AS D +++++
Sbjct: 344 HEGEISKICFNAQGNRIVTASSDKTSRLWD 373
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWDMLG 114
++ +G D VNV+ P+ VMS+ H +P+ES+ + V G + +WD L
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDM 174
K+L H + SL G + S SLD D+ +WD+
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDT-------------------DIKLWDV 134
Query: 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
G + K+ H + V L + GK L SA+ DH K++++
Sbjct: 135 RRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWD 111
+++++GS ++ V+D + + ++ H + + S+ P G FV G LD + +WD
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLWD 133
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
+ G + K+ H + V L + GK L SA+ DH K++++T
Sbjct: 134 VRRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT--------------- 177
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
GK++ +FT H V + L S S D + +++ F
Sbjct: 178 -----AGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKF 221
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S +V T T H+ ++ + ++T S + +I+GS+D TV V++
Sbjct: 203 LWDIQSGEEVFTLTGHSA--EIISLSFNT-------------SGNRIITGSFDHTVTVWE 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S + + +TG C +WD + GK + T H +
Sbjct: 248 ADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV-NGKCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
C GK + +AS D A+I F+ C+ + G H
Sbjct: 307 LDSCFDYTGKLIATASADGTARI----------FSAATRECVTKLEG----------HEG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYE 216
++ + G RL++ S D A+I++
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 27/193 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL--PSGGIFVTGGGLDVCIWD 111
S I+GSYD+T ++DT S + + ++ V + P G TG C
Sbjct: 103 SGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
+ GK H F H + L + + S+D AK +
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK-------------------L 203
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL----- 226
WD+ G ++ T H + SL + G R+I+ S DH ++E V+TL
Sbjct: 204 WDIQSGEEVF-TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCA 262
Query: 227 DYPSPVLSIDVSM 239
+ S V + D S+
Sbjct: 263 EISSAVFNWDCSL 275
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WD+ S + T H+ +YV +P S++++SGS+D++V +
Sbjct: 111 LKIWDVSSGKCLKTLKGHS--------------NYVFCCNFNP-QSNLIVSGSFDESVRI 155
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHK 127
+D ++ + ++ H PV +V G + V+ +C IWD G L +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V+ + + GK +++A+LD+ TLK +WD GK L +TCH
Sbjct: 216 PVSFVKFSPNGKYILAATLDN-------TLK------------LWDY-SKGKCLKTYTCH 255
Query: 188 HKTVTSLCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C+ +GGK ++S S D+ I+ + V L
Sbjct: 256 KN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKL 297
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 83 HGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141
H V SV P+G + + IW G K + H ++ + +S L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSNLL 102
Query: 142 ISASLDHHAKIYEM-------TLKTVSSF--------------TGGLD--VCIWDMLGGG 178
+SAS D KI+++ TLK S++ +G D V IWD + G
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTG 161
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
K L H V+++ G ++S+S D +I++ + + TL D +P +S
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIW 110
SS ++++G D VN++ P+ ++S+ H S ++SV + + V G + +W
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV-TFDASEVLVAAGAASGTIKLW 86
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK------------ 158
D L K++ T H S+ G+ S SLD + KI+++ K
Sbjct: 87 D-LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
Query: 159 -TVSSFT--------GGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 207
V FT GG D V +WD L GKLL +F H + SL L + S
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGS 204
Query: 208 LDHHAKIYEMVNF 220
D K +++ F
Sbjct: 205 ADRTVKFWDLETF 217
>sp|O94967|WDR47_HUMAN WD repeat-containing protein 47 OS=Homo sapiens GN=WDR47 PE=1 SV=1
Length = 919
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNH-----GSPVESVLCLPSGGIFVTGGGLDVCIWD 111
++ SGS DKTV +D R P V V GS V SV PSG + TG C+
Sbjct: 768 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 827
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ GG+++ + H V S+ + G L++ S D K+ ++
Sbjct: 828 DIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 871
>sp|Q8CGF6|WDR47_MOUSE WD repeat-containing protein 47 OS=Mus musculus GN=Wdr47 PE=1 SV=2
Length = 920
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNH-----GSPVESVLCLPSGGIFVTGGGLDVCIWD 111
++ SGS DKTV +D R P V V GS V SV PSG + TG C+
Sbjct: 769 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 828
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ GG+++ + H V S+ + G L++ S D K+ ++
Sbjct: 829 DIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 872
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LW+I + +V T H+ ++ + ++T S D +I+GS+D TV V+D
Sbjct: 203 LWNIQNGEEVCTLRGHSA--EIISLSFNT-------------SGDRIITGSFDHTVVVWD 247
Query: 72 TRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S L + +TG C +WD G K + T H +
Sbjct: 248 ADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNG-KCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
C GK + +AS D A+I+ + K + K H
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATR--------------------KCIAKLEGHEG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
++ + G RL++ S D A+I++ + L+
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 27/193 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL--PSGGIFVTGGGLDVCIWD 111
S I+GSYD+T ++DT S + + ++ V + P G TG C
Sbjct: 103 SGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLW 162
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
+ GK H F H + L + + S+D AK++ + G +VC
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNI--------QNGEEVC- 213
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-----VNFSPVHTL 226
L G H + SL + G R+I+ S DH +++ VN H
Sbjct: 214 --TLRG---------HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCA 262
Query: 227 DYPSPVLSIDVSM 239
+ S + + D S+
Sbjct: 263 EISSALFNWDCSL 275
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 24/176 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL--PSGGIFVTGGGLDVC-IW 110
S D I+GSYD+T V++T + + V ++ V + P G VTG C +W
Sbjct: 105 SGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLW 164
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVC 170
D G +L + H + L + + S+D+ AK+
Sbjct: 165 DAYTG-QLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKL------------------ 205
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
WD+ G + H + SL +GG +++ S DH ++++++ VH L
Sbjct: 206 -WDVETGQERA-TLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVL 259
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 31/198 (15%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PSGGIFVTGGGLDVC-IWD 111
D +++GS+DKT ++D + ++ G E ++CL P I TG + +WD
Sbjct: 150 DKIVTGSFDKTCKLWDAYTGQLYYTLK-GHQTE-IVCLSFNPQSTIIATGSMDNTAKLWD 207
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-------------- 157
+ G + H + SL +GG +++ S DH ++++++
Sbjct: 208 VETGQERA-TLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEV 266
Query: 158 -KTVSSFTGGLDVC--------IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 208
T ++ G L V +WD+ G + L H V + + G +++SAS
Sbjct: 267 SSTQFNYAGTLVVSGSIDCTSRLWDVRSG-RCLSVKQGHTDEVLDVAFDAAGTKMVSASA 325
Query: 209 DHHAKIYEMVNFSPVHTL 226
D A++Y + HTL
Sbjct: 326 DGSARLYHTLTGVCQHTL 343
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 44/224 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LWD+ S + T H+ +YV +P S+++ISGS+D+TV +
Sbjct: 107 LKLWDVRSGKCLKTLKGHS--------------NYVFCCNFNP-PSNLIISGSFDETVKI 151
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHK 127
++ ++ + +++ H PV +V SG + V+G +C IWD G L +
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V+ + + GK +++A+LD+ TLK +WD G+ L +T H
Sbjct: 212 PVSFVKFSPNGKYILTATLDN-------TLK------------LWDY-SRGRCLKTYTGH 251
Query: 188 HKTVTSLCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C+ +GGK ++S S D+ I+ + V L
Sbjct: 252 KN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 293
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 27/180 (15%)
Query: 81 VNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 139
V H V SV P+G + + IW G K H+ ++ + +S
Sbjct: 38 VGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDG-KYEKTLYGHNLEISDVAWSSDSS 96
Query: 140 RLISASLDHHAKIYEM-------TLKTVSSF--------------TGGLD--VCIWDMLG 176
RL+SAS D K++++ TLK S++ +G D V IW++
Sbjct: 97 RLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEV-K 155
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
GK L + H V+++ G ++S S D +I++ + + TL D +P +S
Sbjct: 156 TGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSF 215
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LWD+ S + T H+ +YV +P S+++ISGS+D+TV +
Sbjct: 107 LKLWDMRSGKCLKTLKGHS--------------NYVFCCNFNP-PSNLIISGSFDETVKI 151
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHK 127
++ ++ + +++ H PV +V SG + V+G +C IWD G L +
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH 187
V+ + + GK +++A+LD+ K+++ + G+ L +T H
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSR--------------------GRCLKTYTGH 251
Query: 188 HKTVTSLCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C+ +GGK ++S S D+ I+ + V L
Sbjct: 252 KN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 293
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 27/180 (15%)
Query: 81 VNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 139
V H V SV P+G + + IW G K H+ ++ + +S
Sbjct: 38 VGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDG-KYERTLYGHNLEISDVAWSSDSS 96
Query: 140 RLISASLDHHAKIYEM-------TLKTVSSF--------------TGGLD--VCIWDMLG 176
RL+SAS D K+++M TLK S++ +G D V IW+ +
Sbjct: 97 RLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWE-VK 155
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
GK L + H V+++ G ++S S D +I++ + + TL D +P +S
Sbjct: 156 TGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSF 215
>sp|O94620|CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf17 PE=1 SV=1
Length = 340
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSG-GIFVTGG 103
V A V V S+++ S S D T+ V+D+RS D + ++ P+ +V G +F+ G
Sbjct: 138 VNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFI--G 195
Query: 104 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
G+D + IWD L H H +TSL ++ G L+S S+D+ +I+++
Sbjct: 196 GIDGAIKIWD-LRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDV 248
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 110 WDMLGGGKLLHKFTCHHKTVTSL-CLASGGKRLISASLDHHAKIYEMT----LKTVSS-- 162
WD + G K+ K H V +L L G + L S S D K+++ +KT+
Sbjct: 120 WDAVSGQKI-RKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKY 178
Query: 163 --------------FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 206
F GG+D + IWD L H H +TSL ++ G L+S
Sbjct: 179 PLTAVAIAQQGTQVFIGGIDGAIKIWD-LRNNHCSHVLKGHKDIITSLAISKDGSSLLSN 237
Query: 207 SLDHHAKIYEMVNFSPVH 224
S+D+ +I+++ F+
Sbjct: 238 SMDNTVRIFDVKPFASAQ 255
>sp|P46800|GBLP_DICDI Guanine nucleotide-binding protein subunit beta-like protein
OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2
Length = 329
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 44 YVRAGTVSPVSSDIVISGSYDKTVNVY-----DTRSPDPVMSV--NHGSPVESVLCLPSG 96
+V + VSP + D +IS S DKTV V+ D SP H V+ V+ +
Sbjct: 23 FVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV-ISHD 81
Query: 97 GIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G F G D + +WD+ G F H + V S+ +S +++IS S D K
Sbjct: 82 GQFALSGSWDNTLRLWDITKGVS-TRLFKGHTQDVMSVAFSSDNRQIISGSRDATIK--- 137
Query: 155 MTLKTVSSFTGGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213
+W+ LG K L H V+ + + ++S S D+ K
Sbjct: 138 ----------------VWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVK 181
Query: 214 IYEMVNFSPVHTL 226
I+++ +F HTL
Sbjct: 182 IWDIKSFKCNHTL 194
>sp|Q9JHB4|WDR31_MOUSE WD repeat-containing protein 31 OS=Mus musculus GN=Wdr31 PE=2 SV=1
Length = 367
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 34/226 (15%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVP------LMLYSTPQDYV-----RAGTVSPVSSDIVIS 60
LW + + Q S + T +Y P + PQ+Y+ ++ ++SD+ IS
Sbjct: 20 LWAVMGKLQ-SKLRHSTYLYSRPDGIIEERVQTKAPQEYIPVHVDTVSVIATLNSDLCIS 78
Query: 61 GSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118
G DKT Y+ ++ V H + + C+P F + V +WD+ G
Sbjct: 79 GGKDKTAVAYNWKTGRMVKRFTGHEREITKIACIPKANQFFSASRDKTVLMWDLQGSSHP 138
Query: 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG 178
+ + H VT L ++ +L + S D+ + +WD +G G
Sbjct: 139 RQQLSGHAMVVTGLAVSPDSSQLCTGSRDN-------------------SLLLWD-VGTG 178
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
+ + + + VT LC ++ S D ++++ H
Sbjct: 179 QCVERASVSRNLVTHLCWVPSEPYIVQTSEDKTIRLWDSRGLQMAH 224
>sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=1 SV=1
Length = 579
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 83 HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H V +V P G + +D + +W++ G + L F H K V +C + G +
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQ 346
Query: 141 LISASLDHHAKIYEM-TLKTVSSFTG-GLDVCI-----------------------WDML 175
+SA+ D + K+++ T + +S FT + C+ WD +
Sbjct: 347 FLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWD-I 405
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
G+++ ++ H V ++ +R +S S D +++E
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 446
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LWD + +S FTN KVP + P + ++ ++G DK +
Sbjct: 356 LKLWDTETGQCISRFTNR----KVPYCVKFNPDE---------DKQNLFVAGMSDKKIVQ 402
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT---GGGLDVCIWDMLGGGKLLHKFTCH 125
+D RS + V + H V +++ + FV+ L V WD+ K + + + H
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMH 462
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIY 153
++ ++ L+ GK L S+D+ I+
Sbjct: 463 --SMPAVTLSPNGKWLACQSMDNQILIF 488
>sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1
Length = 579
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 83 HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H V +V P G + +D + +W++ G + L F H K V +C + G +
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQ 346
Query: 141 LISASLDHHAKIYEM-TLKTVSSFTG-GLDVCI-----------------------WDML 175
+SA+ D + K+++ T + +S FT + C+ WD +
Sbjct: 347 FLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWD-I 405
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
G+++ ++ H V ++ +R +S S D +++E
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWE 446
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LWD + +S FTN KVP + P + ++ ++G DK +
Sbjct: 356 LKLWDTETGQCISRFTNR----KVPYCVKFNPDE---------DKQNLFVAGMSDKKIVQ 402
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT---GGGLDVCIWDMLGGGKLLHKFTCH 125
+D RS + V + H V +++ + FV+ L V WD+ K + + + H
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMH 462
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIY 153
++ ++ L+ GK L S+D+ I+
Sbjct: 463 --SMPAVTLSPNGKWLACQSMDNQILIF 488
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 28/171 (16%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+ISGS DKT+ +++ R+ + +S+ HG +SVLCL + G D V +W GG
Sbjct: 326 LISGSMDKTIRIWNYRTSE-CISILHGH-TDSVLCLTFDSTLLVSGSADCTVKLWHFSGG 383
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175
++ H V S+ + ++S S D KI+ + T
Sbjct: 384 KRI--TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTC--------------- 426
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
LH F+ H V SL LA RL S SLD K +++ VHTL
Sbjct: 427 -----LHTFSAHIGPVQSLALADS--RLFSCSLDGTIKQWDIEKKKCVHTL 470
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 82/202 (40%), Gaps = 37/202 (18%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDML 113
S +++SGS D TV ++ + H PV SV + G+ ++G + IW L
Sbjct: 363 STLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS-L 421
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-------------------HHAKIYE 154
LH F+ H V SL LA RL S SLD H ++E
Sbjct: 422 ETNTCLHTFSAHIGPVQSLALADS--RLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWE 479
Query: 155 MTLKTVSSFTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
+ + +G D V +W+ + +H H + VTS+ L G ++S S D
Sbjct: 480 IAADHLRLISGAHDGVVKVWEAC---ECVHTLKNHSEPVTSVAL--GDCEVVSGSED--G 532
Query: 213 KIY-----EMVNFSPVHTLDYP 229
KIY N SPV T P
Sbjct: 533 KIYLWLFNNAPNESPVSTQSVP 554
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 50.8 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 58 VISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG 114
V +GS DKT ++D + D V + + H +PV S+ P G TG G+ + +WD +G
Sbjct: 624 VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI-INVWD-IG 681
Query: 115 GGKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
GK L + H K + SL + G LIS DH +++++ T
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKAT 727
Score = 40.0 bits (92), Expect = 0.015, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 60 SGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGK 117
+ S+D+T ++ P+ + H + V+ V P+G TG C +WD + G
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD-VSTGD 642
Query: 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177
+ F H V S+ + G+ L + S D G+ + +WD +G
Sbjct: 643 SVRLFLGHTAPVISIAVCPDGRWLSTGSED------------------GI-INVWD-IGT 682
Query: 178 GKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEM 217
GK L + H K + SL + G LIS DH +++++
Sbjct: 683 GKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WD+ S V T H ++YV + +P S++++SGS+D+ V +
Sbjct: 112 IKIWDVESGKMVKTLKGH--------------KEYVFGVSFNP-QSNLIVSGSFDENVRI 156
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H PV V G V G D V IWD G L T
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVH-FNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 127 KTVTSLCLASGGKRLISASLDHHAKI--YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF 184
K V+ + + GK +++ +LD+ ++ Y K + ++TG + K+
Sbjct: 216 KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKN-------------EKY 262
Query: 185 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C T + C GK +++ S D+ IY + V TL
Sbjct: 263 -CIFSTFSVTC----GKWIVTGSEDNLIYIYNLQTREIVQTL 299
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI-------YEMTL------------- 157
L + H K+++S+ + GK L SAS D KI +E TL
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 158 ---KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214
K + S + + IWD + GK++ H + V + ++S S D + +I
Sbjct: 98 QDSKLICSASDDKTIKIWD-VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 215 YEM 217
+++
Sbjct: 157 WDV 159
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 24/176 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL--PSGGIFVTGGGLDVCIWD 111
S I+GSYD+T ++DT S + + ++ V + P G TG C
Sbjct: 103 SGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLW 162
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDVC 170
GK + F H + L + + S+D AK++++ + + VS+ G
Sbjct: 163 SAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG----- 217
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
H + SLC + G RL++ S DH A ++++ + VH L
Sbjct: 218 ----------------HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWD+ S +VST H ++ + ++T + D +++GS+D T ++D
Sbjct: 203 LWDVESGEEVSTLAGH--FAEIISLCFNT-------------TGDRLVTGSFDHTAILWD 247
Query: 72 TRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
S V ++ H + V + T C +WD GG+ L H+ V
Sbjct: 248 VPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA-EGGQCLATLLGHNDEV 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
+C G+ + +AS D ++++ + +F C+ + G H
Sbjct: 307 LDVCFNYTGQLIATASADGTSRVF-----STDTFQ-----CLCQLEG----------HKG 346
Query: 190 TVTSLCLASGGKRLISASLDHHAKIY 215
++ +C + G R+++AS+D ++++
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVW 372
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 9 IVALWDIPSEAQVSTFTNHTT-IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
++ +WDI + V H IY + DY +G D ++SGS D+TV
Sbjct: 466 LIRIWDIENRKIVMILQGHEQDIYSL---------DYFPSG-------DKLVSGSGDRTV 509
Query: 68 NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKF--- 122
++D R+ ++++ V +V P G ++ G LD V +WD G L+ +
Sbjct: 510 RIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-LVERLDSE 568
Query: 123 ----TCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
T H +V S+ G+ ++S SLD K++ +
Sbjct: 569 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 605
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 33/204 (16%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFV 100
+YV +P SS +V+SGS+D++V ++D ++ + ++ H PV +V G +
Sbjct: 171 NNYVFCCNFNPQSS-LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 101 TGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
+G GL V IWD G + + V + + GK +++++LD TLK
Sbjct: 230 SGSYDGL-VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDS-------TLK 281
Query: 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL-----ASGGKRLISASLDHHAK 213
+WD GK L ++T H + C+ +GGK +IS S D
Sbjct: 282 ------------LWD-FSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 214 IYEMVNFSPVHTLD-YPSPVLSID 236
I+ + V L+ + PVL+ D
Sbjct: 327 IWNLQTREIVQCLEGHTQPVLASD 350
>sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2
Length = 3036
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 27/160 (16%)
Query: 74 SPDPVMSVN-HGSPVESVLCLPSGGIFVTGG----GLDVCIWDML--GGGKLLHKFTCHH 126
+P P MS H + S + T G +VC+WD L G L+H FTCH
Sbjct: 2841 NPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHD 2900
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186
T L A + LIS H VCI+D + +L+H F
Sbjct: 2901 HGATVLQYAPKQQLLISGGRKGH-------------------VCIFD-IRQRQLIHTFQA 2940
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
H + +L L + + S + + K++ + +H+
Sbjct: 2941 HDSAIKALALDPYEEYFTTGSAEGNIKVWRLTGHGLIHSF 2980
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 32/160 (20%)
Query: 87 VESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 145
+ SV P G TG V +WD + K+ H F H + SL +S G+ ++S S
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWD-IHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGS 388
Query: 146 LDHHAKIYEMTLKTVSSFT--------------------------GGLD--VCIWDMLGG 177
D AKI+++ K +FT G LD V +WD
Sbjct: 389 GDKKAKIWDIE-KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQ-T 446
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
G L ++ H +V S+ + GK L S SLD K++++
Sbjct: 447 GYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,814,094
Number of Sequences: 539616
Number of extensions: 4017414
Number of successful extensions: 11835
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 581
Number of HSP's that attempted gapping in prelim test: 10037
Number of HSP's gapped (non-prelim): 1832
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)