Query psy11036
Match_columns 239
No_of_seqs 441 out of 1128
Neff 11.4
Searched_HMMs 46136
Date Fri Aug 16 16:28:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11036.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11036hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 100.0 1.3E-42 2.8E-47 253.8 19.5 218 5-239 134-419 (480)
2 KOG0272|consensus 100.0 1.4E-41 3E-46 250.9 13.9 201 3-239 236-440 (459)
3 KOG0272|consensus 100.0 8.1E-41 1.8E-45 246.8 15.0 198 7-239 196-397 (459)
4 KOG0279|consensus 100.0 3E-38 6.5E-43 222.2 22.7 200 3-239 33-243 (315)
5 KOG0271|consensus 100.0 4.3E-38 9.4E-43 230.2 18.0 202 2-239 221-461 (480)
6 KOG0263|consensus 100.0 1.8E-36 3.9E-41 239.0 18.2 179 5-219 470-650 (707)
7 KOG0263|consensus 100.0 1.8E-36 3.9E-41 238.9 17.9 175 43-239 452-629 (707)
8 KOG0295|consensus 100.0 7.7E-36 1.7E-40 216.9 18.8 217 5-238 127-385 (406)
9 KOG0279|consensus 100.0 3.7E-35 8E-40 206.6 21.1 185 4-227 81-271 (315)
10 KOG0315|consensus 100.0 3.7E-34 8E-39 198.8 24.4 216 7-237 60-308 (311)
11 KOG0315|consensus 100.0 2.7E-34 5.9E-39 199.5 23.7 218 3-238 15-267 (311)
12 KOG0273|consensus 100.0 9.4E-35 2E-39 217.6 22.9 216 5-238 254-502 (524)
13 KOG0286|consensus 100.0 1.5E-33 3.3E-38 199.8 23.8 199 4-238 73-282 (343)
14 KOG0291|consensus 100.0 1.1E-32 2.4E-37 217.0 26.4 217 6-239 285-530 (893)
15 KOG0282|consensus 100.0 7.8E-35 1.7E-39 218.5 12.8 221 3-239 232-484 (503)
16 KOG0285|consensus 100.0 6.6E-33 1.4E-37 201.7 20.7 208 1-226 166-397 (460)
17 KOG0285|consensus 100.0 3.3E-33 7E-38 203.3 17.6 185 19-239 142-329 (460)
18 KOG0265|consensus 100.0 8.4E-33 1.8E-37 196.6 19.1 204 4-239 108-318 (338)
19 PTZ00421 coronin; Provisional 100.0 3.1E-31 6.7E-36 211.3 29.8 196 43-239 76-313 (493)
20 KOG0286|consensus 100.0 3.3E-32 7E-37 193.1 21.1 178 4-216 162-343 (343)
21 KOG0284|consensus 100.0 2.9E-34 6.2E-39 211.6 10.3 199 5-239 157-360 (464)
22 KOG0266|consensus 100.0 6E-32 1.3E-36 215.6 24.2 217 6-239 179-432 (456)
23 KOG0284|consensus 100.0 2.8E-34 6E-39 211.6 9.7 197 6-239 116-316 (464)
24 PTZ00420 coronin; Provisional 100.0 1.4E-30 3E-35 208.9 31.0 220 4-239 50-316 (568)
25 KOG0276|consensus 100.0 2.3E-32 5.1E-37 211.4 19.1 215 7-237 34-277 (794)
26 KOG0310|consensus 100.0 6.6E-32 1.4E-36 203.0 20.7 216 8-239 48-289 (487)
27 KOG0292|consensus 100.0 3.9E-32 8.5E-37 217.4 19.7 217 7-239 30-302 (1202)
28 KOG0296|consensus 100.0 1.1E-30 2.4E-35 190.2 25.4 218 3-239 81-378 (399)
29 KOG0316|consensus 100.0 1.5E-31 3.3E-36 184.6 18.8 219 3-239 34-280 (307)
30 KOG0645|consensus 100.0 1.1E-30 2.4E-35 183.5 23.4 188 20-239 6-205 (312)
31 cd00200 WD40 WD40 domain, foun 100.0 1.1E-29 2.3E-34 191.3 28.6 218 5-239 28-271 (289)
32 KOG0319|consensus 100.0 1.7E-31 3.6E-36 209.8 18.0 203 2-239 381-599 (775)
33 KOG0277|consensus 100.0 7.2E-32 1.6E-36 188.0 14.2 201 5-239 80-288 (311)
34 KOG0645|consensus 100.0 5E-30 1.1E-34 180.2 23.2 186 1-218 30-225 (312)
35 KOG1407|consensus 100.0 1.9E-30 4.1E-35 181.5 20.5 202 1-239 80-282 (313)
36 PLN00181 protein SPA1-RELATED; 100.0 7.3E-30 1.6E-34 217.0 27.7 207 4-239 551-773 (793)
37 KOG0643|consensus 100.0 5.4E-30 1.2E-34 179.8 21.1 202 4-239 28-241 (327)
38 KOG0291|consensus 100.0 9.5E-30 2E-34 200.6 23.7 207 5-227 369-621 (893)
39 KOG0281|consensus 100.0 4E-32 8.7E-37 197.2 9.2 193 4-220 213-430 (499)
40 KOG0266|consensus 100.0 1.5E-29 3.3E-34 201.9 24.3 176 43-239 160-344 (456)
41 KOG0313|consensus 100.0 2.4E-29 5.3E-34 184.1 22.6 218 5-238 122-398 (423)
42 KOG0318|consensus 100.0 8.1E-29 1.7E-33 188.3 25.0 222 1-239 205-540 (603)
43 KOG1446|consensus 100.0 9.9E-29 2.1E-33 177.1 24.1 202 2-239 74-285 (311)
44 KOG0275|consensus 100.0 1.3E-30 2.9E-35 188.0 14.3 229 1-239 221-489 (508)
45 KOG0277|consensus 100.0 7.7E-29 1.7E-33 172.9 20.6 200 7-239 37-244 (311)
46 KOG0295|consensus 100.0 6.1E-29 1.3E-33 181.2 20.4 179 3-217 210-405 (406)
47 KOG0273|consensus 100.0 5.2E-29 1.1E-33 187.0 20.5 181 1-218 332-523 (524)
48 KOG0289|consensus 100.0 4.4E-29 9.6E-34 185.7 19.8 200 4-239 237-442 (506)
49 KOG0318|consensus 100.0 3.4E-28 7.3E-33 184.9 24.9 211 8-236 129-370 (603)
50 KOG0293|consensus 100.0 4.6E-29 9.9E-34 184.7 19.1 217 5-239 243-492 (519)
51 KOG0269|consensus 100.0 4.9E-30 1.1E-34 202.6 14.7 202 3-218 105-340 (839)
52 KOG0265|consensus 100.0 7.6E-29 1.7E-33 176.6 19.3 202 1-239 62-276 (338)
53 PLN00181 protein SPA1-RELATED; 100.0 6.3E-28 1.4E-32 205.2 28.5 221 7-239 457-718 (793)
54 KOG0305|consensus 100.0 8.3E-29 1.8E-33 192.0 19.6 196 7-239 196-397 (484)
55 cd00200 WD40 WD40 domain, foun 100.0 2.1E-27 4.6E-32 178.8 25.8 194 43-239 10-229 (289)
56 KOG0281|consensus 100.0 5.2E-30 1.1E-34 186.3 10.3 142 3-166 252-399 (499)
57 KOG0316|consensus 100.0 2E-28 4.4E-33 169.2 17.3 180 43-227 18-222 (307)
58 KOG0310|consensus 100.0 5.9E-28 1.3E-32 181.9 20.5 181 2-217 127-308 (487)
59 KOG0319|consensus 100.0 6.5E-29 1.4E-33 195.3 16.0 183 1-219 427-620 (775)
60 KOG0278|consensus 100.0 1.4E-28 3.1E-33 171.4 15.4 183 4-223 118-302 (334)
61 KOG0275|consensus 100.0 4.8E-30 1.1E-34 185.2 8.0 173 43-237 214-400 (508)
62 KOG0274|consensus 100.0 1.7E-27 3.8E-32 190.4 22.5 212 4-237 224-462 (537)
63 KOG0647|consensus 100.0 1.6E-27 3.5E-32 170.0 18.9 198 39-238 24-302 (347)
64 KOG0288|consensus 100.0 3.1E-28 6.7E-33 180.1 15.8 200 4-239 237-441 (459)
65 KOG0646|consensus 100.0 1.1E-27 2.3E-32 179.7 18.9 218 7-239 60-329 (476)
66 KOG0308|consensus 100.0 1.8E-28 3.8E-33 190.6 15.1 202 2-239 41-265 (735)
67 KOG0283|consensus 100.0 5.9E-28 1.3E-32 192.4 18.3 181 34-219 361-577 (712)
68 KOG0973|consensus 100.0 3.8E-27 8.2E-32 192.4 22.8 222 1-239 28-335 (942)
69 KOG0264|consensus 100.0 8.4E-28 1.8E-32 179.6 17.0 202 5-239 144-383 (422)
70 KOG0276|consensus 100.0 1E-27 2.2E-32 185.9 17.9 194 43-239 14-237 (794)
71 KOG0305|consensus 100.0 1.6E-27 3.5E-32 184.9 18.8 197 6-221 237-464 (484)
72 KOG0267|consensus 100.0 4E-29 8.8E-34 196.2 10.1 199 5-239 47-248 (825)
73 KOG0274|consensus 100.0 4.2E-27 9E-32 188.3 21.2 198 5-226 268-490 (537)
74 KOG0296|consensus 100.0 1.2E-26 2.5E-31 169.4 21.6 172 20-227 56-229 (399)
75 KOG0643|consensus 100.0 1.3E-27 2.9E-32 167.9 15.5 199 3-218 69-317 (327)
76 KOG0294|consensus 100.0 1.9E-26 4E-31 165.5 20.9 198 35-237 36-305 (362)
77 KOG0306|consensus 100.0 2.5E-27 5.3E-32 187.0 17.2 178 40-239 452-644 (888)
78 KOG0282|consensus 100.0 2.3E-28 4.9E-33 184.0 9.7 173 19-227 205-381 (503)
79 KOG0264|consensus 100.0 8.2E-27 1.8E-31 174.3 17.8 193 3-218 195-404 (422)
80 KOG1539|consensus 100.0 3.4E-26 7.4E-31 182.4 22.0 136 5-156 179-318 (910)
81 KOG0640|consensus 100.0 5.9E-27 1.3E-31 168.1 15.5 187 5-227 131-344 (430)
82 KOG0292|consensus 100.0 1.3E-26 2.8E-31 186.1 18.6 195 43-239 10-260 (1202)
83 KOG0278|consensus 100.0 1E-27 2.3E-32 167.1 10.7 217 6-239 37-277 (334)
84 KOG0300|consensus 100.0 1.2E-26 2.6E-31 167.2 15.9 199 4-238 166-407 (481)
85 KOG0283|consensus 99.9 2.4E-26 5.1E-31 183.3 18.7 176 40-239 265-511 (712)
86 KOG1407|consensus 99.9 6.8E-26 1.5E-30 158.9 18.6 198 5-238 39-240 (313)
87 KOG0289|consensus 99.9 8.2E-26 1.8E-30 168.5 19.9 199 3-217 278-505 (506)
88 KOG0308|consensus 99.9 3E-26 6.5E-31 178.3 17.4 182 3-220 90-287 (735)
89 KOG0306|consensus 99.9 1.1E-25 2.5E-30 177.7 20.5 198 5-239 391-602 (888)
90 KOG1036|consensus 99.9 1.9E-25 4.1E-30 159.8 19.0 196 39-238 10-283 (323)
91 KOG0772|consensus 99.9 4.2E-26 9.2E-31 173.4 16.5 176 43-239 269-467 (641)
92 KOG0299|consensus 99.9 1.1E-25 2.4E-30 168.7 18.3 210 3-239 219-435 (479)
93 KOG0640|consensus 99.9 3.2E-26 7E-31 164.4 14.4 198 3-217 189-425 (430)
94 KOG4283|consensus 99.9 1.3E-25 2.8E-30 160.2 16.9 208 3-222 61-280 (397)
95 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.1E-23 2.4E-28 160.6 28.2 215 5-239 50-300 (300)
96 KOG0268|consensus 99.9 4.1E-26 9E-31 166.6 13.9 217 2-238 83-324 (433)
97 PTZ00421 coronin; Provisional 99.9 1.5E-24 3.3E-29 173.2 24.0 180 4-199 94-314 (493)
98 KOG0302|consensus 99.9 1.7E-25 3.7E-30 164.1 16.9 193 6-218 173-378 (440)
99 PTZ00420 coronin; Provisional 99.9 1.7E-24 3.7E-29 174.0 23.8 181 4-200 93-318 (568)
100 KOG1332|consensus 99.9 1.3E-25 2.9E-30 156.0 15.0 206 2-239 27-266 (299)
101 KOG0293|consensus 99.9 1.6E-25 3.4E-30 166.1 15.1 196 5-219 288-514 (519)
102 KOG0639|consensus 99.9 1.5E-25 3.2E-30 170.2 15.1 220 5-238 437-683 (705)
103 KOG1446|consensus 99.9 1.5E-23 3.2E-28 150.7 24.4 195 43-239 15-242 (311)
104 KOG0269|consensus 99.9 6.2E-26 1.3E-30 179.6 12.1 176 44-239 89-273 (839)
105 KOG1274|consensus 99.9 4.6E-24 1E-28 171.9 22.1 215 3-239 30-280 (933)
106 KOG0313|consensus 99.9 1.7E-24 3.7E-29 158.9 17.8 163 33-217 251-417 (423)
107 KOG0772|consensus 99.9 5.6E-25 1.2E-29 167.4 15.7 208 1-239 182-419 (641)
108 KOG0641|consensus 99.9 2.2E-23 4.7E-28 144.0 21.8 196 40-239 87-329 (350)
109 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.2E-22 2.5E-27 154.9 28.2 220 1-239 4-258 (300)
110 KOG0268|consensus 99.9 2.1E-25 4.6E-30 162.9 11.7 181 9-223 168-350 (433)
111 KOG1408|consensus 99.9 1.9E-24 4.2E-29 170.4 17.3 196 42-239 459-693 (1080)
112 KOG0301|consensus 99.9 7.2E-24 1.6E-28 166.2 18.4 188 4-237 77-267 (745)
113 KOG4378|consensus 99.9 1.2E-23 2.6E-28 159.6 17.3 200 4-239 97-303 (673)
114 KOG0973|consensus 99.9 1.7E-23 3.6E-28 171.3 19.3 176 43-239 14-229 (942)
115 KOG0270|consensus 99.9 2.3E-23 5.1E-28 155.7 18.0 190 3-224 261-455 (463)
116 KOG2919|consensus 99.9 2.4E-23 5.2E-28 150.3 15.1 208 1-239 126-350 (406)
117 KOG0646|consensus 99.9 3.8E-23 8.3E-28 155.4 16.5 204 7-239 17-227 (476)
118 KOG0307|consensus 99.9 3.9E-24 8.5E-29 175.9 11.6 201 5-239 87-306 (1049)
119 KOG0299|consensus 99.9 1.3E-22 2.7E-27 152.4 17.8 195 5-227 161-365 (479)
120 KOG0267|consensus 99.9 1.5E-24 3.2E-29 170.8 7.8 175 43-239 29-206 (825)
121 KOG0270|consensus 99.9 2E-22 4.4E-27 150.7 17.1 159 43-221 244-407 (463)
122 KOG0302|consensus 99.9 1.5E-22 3.2E-27 148.8 15.1 184 8-211 234-432 (440)
123 KOG0641|consensus 99.9 4.7E-21 1E-25 132.5 21.3 178 7-217 162-348 (350)
124 KOG0301|consensus 99.9 3.1E-22 6.6E-27 157.2 16.4 192 3-237 30-227 (745)
125 KOG0288|consensus 99.9 5.8E-23 1.3E-27 152.4 10.2 193 43-239 176-397 (459)
126 KOG4283|consensus 99.9 2.9E-21 6.3E-26 138.2 17.8 201 1-217 117-364 (397)
127 KOG0290|consensus 99.9 6.8E-21 1.5E-25 135.9 19.4 195 43-239 97-345 (364)
128 KOG2048|consensus 99.9 2.5E-20 5.3E-25 146.2 24.3 216 6-238 45-300 (691)
129 KOG2096|consensus 99.9 1.4E-21 3.1E-26 141.0 16.2 175 43-218 87-308 (420)
130 KOG1539|consensus 99.9 8.8E-22 1.9E-26 157.5 16.6 176 6-218 468-648 (910)
131 KOG0303|consensus 99.9 2.6E-21 5.5E-26 143.2 17.6 195 40-237 79-317 (472)
132 KOG1034|consensus 99.9 3.8E-22 8.3E-27 144.3 13.0 199 4-218 111-383 (385)
133 KOG2445|consensus 99.9 8.6E-21 1.9E-25 136.3 19.7 220 2-238 29-341 (361)
134 KOG2096|consensus 99.9 1.9E-21 4E-26 140.5 16.1 181 43-239 188-383 (420)
135 KOG0300|consensus 99.9 1.6E-21 3.4E-26 141.0 15.7 185 31-238 261-453 (481)
136 KOG0321|consensus 99.9 9.6E-22 2.1E-26 153.2 15.6 219 6-239 72-370 (720)
137 KOG0639|consensus 99.9 3.1E-22 6.7E-27 152.4 12.5 175 5-217 528-703 (705)
138 KOG4328|consensus 99.9 8.6E-22 1.9E-26 148.0 14.3 194 6-229 208-414 (498)
139 KOG1007|consensus 99.9 4.1E-21 8.9E-26 136.9 16.2 175 43-238 124-339 (370)
140 KOG1332|consensus 99.9 2.9E-22 6.3E-27 139.5 9.9 178 43-239 12-217 (299)
141 KOG0647|consensus 99.9 3.8E-21 8.2E-26 137.7 15.6 94 5-113 47-145 (347)
142 KOG0321|consensus 99.9 2.5E-21 5.4E-26 150.9 15.9 204 3-220 117-393 (720)
143 KOG2106|consensus 99.9 1.6E-19 3.4E-24 137.7 25.0 218 3-239 175-501 (626)
144 KOG2055|consensus 99.9 2.7E-20 5.8E-25 140.2 17.9 198 4-239 231-445 (514)
145 KOG1273|consensus 99.9 4.4E-20 9.5E-25 133.2 17.3 175 6-218 43-226 (405)
146 KOG1009|consensus 99.9 3.3E-20 7.1E-25 137.7 17.0 205 2-222 30-376 (434)
147 KOG2445|consensus 99.9 4.6E-19 1E-23 127.5 22.2 194 43-238 14-297 (361)
148 KOG1036|consensus 99.9 8.4E-20 1.8E-24 131.1 18.0 180 7-208 34-294 (323)
149 KOG0294|consensus 99.9 6.1E-20 1.3E-24 132.3 17.1 135 82-239 41-178 (362)
150 KOG1188|consensus 99.9 2.3E-20 4.9E-25 135.8 14.5 191 6-227 48-251 (376)
151 KOG4328|consensus 99.9 1.4E-20 3.1E-25 141.5 13.9 192 14-239 172-379 (498)
152 KOG1408|consensus 99.9 2.9E-20 6.4E-25 147.1 15.1 196 7-218 480-713 (1080)
153 KOG1445|consensus 99.9 3.5E-20 7.7E-25 145.0 15.0 113 43-156 80-200 (1012)
154 KOG0642|consensus 99.8 1.7E-20 3.7E-25 144.4 12.9 183 43-227 295-570 (577)
155 KOG4378|consensus 99.8 2.3E-20 5E-25 142.1 13.0 218 7-239 11-260 (673)
156 KOG2055|consensus 99.8 9.7E-20 2.1E-24 137.2 15.9 206 5-239 277-492 (514)
157 KOG1524|consensus 99.8 3.6E-20 7.7E-25 142.3 13.1 138 4-159 81-219 (737)
158 PRK01742 tolB translocation pr 99.8 8.9E-19 1.9E-23 139.7 21.8 214 7-239 183-425 (429)
159 KOG2048|consensus 99.8 3E-18 6.5E-23 134.7 22.9 162 43-224 26-190 (691)
160 KOG0650|consensus 99.8 1E-19 2.2E-24 141.2 14.6 195 43-239 401-660 (733)
161 KOG2106|consensus 99.8 3.8E-18 8.2E-23 130.3 22.7 198 1-217 383-625 (626)
162 KOG1538|consensus 99.8 1.1E-19 2.4E-24 143.1 14.3 219 1-239 20-273 (1081)
163 KOG2919|consensus 99.8 1E-19 2.3E-24 131.7 13.0 182 1-210 166-362 (406)
164 KOG2110|consensus 99.8 7.3E-18 1.6E-22 124.0 22.7 173 8-220 68-250 (391)
165 KOG0307|consensus 99.8 2.1E-20 4.7E-25 154.2 10.5 187 3-221 134-330 (1049)
166 KOG1063|consensus 99.8 4E-19 8.6E-24 139.9 15.5 141 82-239 523-674 (764)
167 KOG1445|consensus 99.8 1.9E-19 4.1E-24 141.0 12.6 139 5-156 600-750 (1012)
168 KOG0771|consensus 99.8 8.1E-19 1.8E-23 130.9 15.4 177 46-239 148-334 (398)
169 KOG1274|consensus 99.8 1.8E-18 3.9E-23 140.1 18.6 173 43-239 14-198 (933)
170 KOG3881|consensus 99.8 2.5E-18 5.5E-23 127.2 17.3 198 6-238 123-340 (412)
171 KOG1007|consensus 99.8 2.5E-18 5.4E-23 122.9 15.9 202 7-218 143-361 (370)
172 COG2319 FOG: WD40 repeat [Gene 99.8 1.7E-16 3.7E-21 125.8 27.4 197 5-237 131-336 (466)
173 KOG1273|consensus 99.8 7.8E-18 1.7E-22 121.7 17.2 175 45-238 26-205 (405)
174 KOG2394|consensus 99.8 1.5E-18 3.2E-23 133.3 14.3 164 43-239 220-384 (636)
175 KOG0771|consensus 99.8 1.6E-18 3.4E-23 129.4 13.8 180 4-219 162-355 (398)
176 KOG1034|consensus 99.8 3E-17 6.6E-22 119.2 19.8 195 43-238 90-362 (385)
177 KOG0644|consensus 99.8 4.2E-20 9E-25 148.3 5.5 189 43-238 191-447 (1113)
178 KOG0649|consensus 99.8 4E-17 8.6E-22 114.2 19.2 199 5-237 29-254 (325)
179 KOG1009|consensus 99.8 2.2E-18 4.7E-23 128.1 13.6 162 43-224 14-201 (434)
180 KOG1063|consensus 99.8 1.8E-18 4E-23 136.3 13.3 180 43-239 526-733 (764)
181 KOG1272|consensus 99.8 8.1E-20 1.8E-24 137.9 5.3 195 5-238 148-343 (545)
182 KOG1587|consensus 99.8 7.3E-17 1.6E-21 129.2 20.5 205 7-239 221-451 (555)
183 KOG0650|consensus 99.8 3.7E-18 8E-23 132.7 12.0 183 3-215 541-732 (733)
184 PF08662 eIF2A: Eukaryotic tra 99.8 2.4E-16 5.3E-21 111.9 20.2 154 46-227 9-187 (194)
185 KOG1188|consensus 99.8 1.7E-17 3.8E-22 120.9 13.9 164 56-238 41-220 (376)
186 COG2319 FOG: WD40 repeat [Gene 99.8 1.3E-15 2.9E-20 120.6 26.0 199 5-239 84-294 (466)
187 KOG1963|consensus 99.8 1.7E-16 3.8E-21 128.2 20.0 203 7-239 36-302 (792)
188 KOG0649|consensus 99.8 9.7E-17 2.1E-21 112.3 15.9 162 43-227 11-195 (325)
189 KOG0290|consensus 99.8 4.8E-17 1E-21 116.5 14.7 180 5-214 170-361 (364)
190 KOG1523|consensus 99.8 6E-17 1.3E-21 117.3 14.7 213 7-237 31-257 (361)
191 PRK03629 tolB translocation pr 99.8 4E-16 8.7E-21 124.3 20.8 191 8-239 223-427 (429)
192 KOG2111|consensus 99.8 1.8E-15 3.8E-20 109.7 21.9 174 7-219 74-257 (346)
193 KOG2110|consensus 99.7 1.4E-15 3.1E-20 112.2 21.1 170 44-239 48-228 (391)
194 PRK11028 6-phosphogluconolacto 99.7 5.3E-15 1.1E-19 114.5 25.2 220 3-239 7-283 (330)
195 KOG1272|consensus 99.7 7.3E-18 1.6E-22 127.5 8.4 192 7-239 190-389 (545)
196 PRK02889 tolB translocation pr 99.7 1.2E-15 2.7E-20 121.6 21.7 197 7-239 175-380 (427)
197 KOG0303|consensus 99.7 9E-16 2E-20 114.2 19.0 139 3-156 99-249 (472)
198 KOG1523|consensus 99.7 2.5E-16 5.4E-21 114.1 15.3 180 43-239 11-216 (361)
199 KOG0322|consensus 99.7 1.2E-16 2.6E-21 112.9 13.2 155 43-217 151-322 (323)
200 KOG0322|consensus 99.7 2.7E-16 5.9E-21 111.2 13.9 200 6-239 33-303 (323)
201 KOG1517|consensus 99.7 1.1E-15 2.4E-20 126.1 19.5 208 4-239 1129-1361(1387)
202 KOG1310|consensus 99.7 2.1E-17 4.6E-22 127.6 8.3 171 20-217 42-230 (758)
203 PRK05137 tolB translocation pr 99.7 6.7E-15 1.5E-19 117.8 22.9 193 7-239 181-386 (435)
204 KOG1517|consensus 99.7 4E-16 8.7E-21 128.7 15.7 188 5-220 1184-1383(1387)
205 PRK05137 tolB translocation pr 99.7 4.2E-15 9E-20 119.0 21.0 192 7-239 225-432 (435)
206 PF08662 eIF2A: Eukaryotic tra 99.7 3.3E-15 7.2E-20 106.1 17.9 113 43-161 60-184 (194)
207 PRK04922 tolB translocation pr 99.7 8.6E-15 1.9E-19 117.1 21.4 191 8-239 228-432 (433)
208 PRK11028 6-phosphogluconolacto 99.7 1.5E-14 3.3E-19 112.0 21.4 197 7-237 101-327 (330)
209 PRK02889 tolB translocation pr 99.7 1.3E-14 2.8E-19 115.8 21.6 192 8-239 220-424 (427)
210 KOG1524|consensus 99.7 5.7E-16 1.2E-20 119.5 13.1 161 55-239 75-237 (737)
211 PRK04922 tolB translocation pr 99.7 1.5E-14 3.2E-19 115.8 21.1 193 7-239 183-388 (433)
212 KOG2139|consensus 99.7 3.2E-15 6.9E-20 110.3 15.5 174 43-239 99-290 (445)
213 KOG2139|consensus 99.7 2E-14 4.4E-19 106.1 19.3 169 2-206 114-298 (445)
214 KOG1538|consensus 99.7 5.6E-16 1.2E-20 122.6 11.8 168 43-239 13-186 (1081)
215 PRK03629 tolB translocation pr 99.7 6.5E-14 1.4E-18 111.7 23.2 195 7-239 178-383 (429)
216 PF02239 Cytochrom_D1: Cytochr 99.7 4.7E-13 1E-17 104.2 26.5 188 5-227 13-211 (369)
217 KOG4227|consensus 99.7 1E-14 2.3E-19 108.8 16.4 111 43-156 57-179 (609)
218 KOG0644|consensus 99.7 2.6E-16 5.6E-21 127.0 7.7 92 4-113 208-300 (1113)
219 KOG4497|consensus 99.7 7.2E-16 1.6E-20 112.4 9.2 183 5-232 68-254 (447)
220 KOG2111|consensus 99.6 9.9E-14 2.1E-18 100.8 19.1 155 65-239 75-236 (346)
221 PRK01029 tolB translocation pr 99.6 3E-13 6.6E-18 107.6 23.5 195 8-239 211-424 (428)
222 TIGR02800 propeller_TolB tol-p 99.6 2.1E-13 4.5E-18 109.0 22.1 177 7-222 169-358 (417)
223 KOG1587|consensus 99.6 1.6E-14 3.4E-19 116.0 14.9 196 2-218 309-516 (555)
224 PF02239 Cytochrom_D1: Cytochr 99.6 4E-13 8.7E-18 104.6 21.8 216 6-239 56-325 (369)
225 KOG1240|consensus 99.6 4.8E-14 1E-18 118.2 17.5 193 13-239 1034-1248(1431)
226 KOG2394|consensus 99.6 3.5E-15 7.5E-20 115.1 9.1 101 76-197 281-383 (636)
227 KOG4547|consensus 99.6 7.3E-13 1.6E-17 103.4 20.1 162 54-238 4-193 (541)
228 KOG0642|consensus 99.6 1.1E-14 2.3E-19 112.9 9.9 131 82-222 292-430 (577)
229 TIGR02800 propeller_TolB tol-p 99.6 8.7E-13 1.9E-17 105.4 21.2 190 8-238 214-417 (417)
230 KOG1240|consensus 99.6 4.2E-13 9E-18 112.8 19.5 206 1-223 1064-1339(1431)
231 PRK04792 tolB translocation pr 99.6 7.8E-13 1.7E-17 106.1 20.3 191 8-239 242-446 (448)
232 KOG4547|consensus 99.6 1.1E-12 2.3E-17 102.5 19.8 185 1-219 8-221 (541)
233 PRK01029 tolB translocation pr 99.6 4.4E-12 9.4E-17 101.1 23.4 200 7-239 164-380 (428)
234 KOG0280|consensus 99.6 3.5E-12 7.5E-17 92.0 20.2 201 6-239 44-263 (339)
235 KOG2321|consensus 99.6 1.9E-13 4.1E-18 106.6 14.5 177 6-219 153-344 (703)
236 PRK00178 tolB translocation pr 99.6 7.4E-12 1.6E-16 100.5 24.2 209 9-239 180-427 (430)
237 KOG2315|consensus 99.5 1.8E-12 3.8E-17 100.8 18.6 167 46-239 221-410 (566)
238 TIGR02658 TTQ_MADH_Hv methylam 99.5 1.6E-10 3.4E-15 88.5 28.7 200 8-227 27-339 (352)
239 PRK04792 tolB translocation pr 99.5 1.2E-11 2.5E-16 99.4 21.7 178 8-222 198-386 (448)
240 PRK01742 tolB translocation pr 99.5 2E-12 4.4E-17 103.4 16.7 129 8-156 228-361 (429)
241 KOG0974|consensus 99.5 1.7E-12 3.7E-17 107.4 16.1 179 7-219 108-289 (967)
242 KOG1963|consensus 99.5 3.3E-11 7.2E-16 98.2 22.7 216 6-238 225-518 (792)
243 KOG3881|consensus 99.5 1.5E-12 3.2E-17 97.1 13.6 145 4-156 167-320 (412)
244 KOG2321|consensus 99.5 2.5E-12 5.5E-17 100.4 14.0 171 47-239 138-323 (703)
245 PF10282 Lactonase: Lactonase, 99.4 5E-09 1.1E-13 81.6 31.3 217 6-237 60-345 (345)
246 KOG1064|consensus 99.4 6.3E-13 1.4E-17 115.4 8.8 178 3-227 2225-2407(2439)
247 KOG1310|consensus 99.4 1.2E-12 2.7E-17 101.7 9.3 127 82-219 48-179 (758)
248 KOG3914|consensus 99.4 7.9E-12 1.7E-16 93.6 12.5 157 47-227 67-232 (390)
249 KOG1064|consensus 99.4 3.4E-12 7.3E-17 111.1 11.3 161 43-227 2209-2375(2439)
250 KOG4227|consensus 99.4 1.8E-11 3.8E-16 91.9 13.7 138 82-239 54-204 (609)
251 KOG4497|consensus 99.4 1.6E-12 3.4E-17 95.3 7.6 138 47-208 13-153 (447)
252 KOG0974|consensus 99.4 5.7E-11 1.2E-15 98.6 16.6 170 44-237 89-266 (967)
253 KOG0309|consensus 99.4 2.1E-12 4.7E-17 103.7 7.6 177 43-219 115-340 (1081)
254 KOG0280|consensus 99.4 3E-11 6.6E-16 87.2 12.6 163 43-222 166-337 (339)
255 KOG1409|consensus 99.4 8.6E-11 1.9E-15 86.7 14.9 138 82-219 195-395 (404)
256 KOG2695|consensus 99.3 7.6E-12 1.7E-16 92.2 9.0 152 59-230 228-388 (425)
257 KOG1334|consensus 99.3 5E-12 1.1E-16 96.9 8.0 116 40-156 140-263 (559)
258 KOG1354|consensus 99.3 1.3E-10 2.8E-15 85.9 13.5 182 43-227 26-311 (433)
259 PRK04043 tolB translocation pr 99.3 3.3E-09 7.2E-14 84.3 22.2 197 7-237 212-419 (419)
260 PLN02919 haloacid dehalogenase 99.3 5.3E-09 1.1E-13 91.8 24.9 170 45-222 685-892 (1057)
261 COG4946 Uncharacterized protei 99.3 7.9E-09 1.7E-13 79.8 22.1 114 43-158 360-479 (668)
262 KOG1354|consensus 99.3 7.5E-10 1.6E-14 81.9 15.9 213 6-220 45-361 (433)
263 PRK04043 tolB translocation pr 99.3 1.5E-08 3.3E-13 80.6 24.7 173 43-239 188-377 (419)
264 PF10282 Lactonase: Lactonase, 99.3 1.3E-07 2.7E-12 73.8 29.4 219 5-239 10-301 (345)
265 KOG4532|consensus 99.3 6.3E-09 1.4E-13 74.7 19.5 156 56-227 129-291 (344)
266 KOG2315|consensus 99.2 1.1E-09 2.4E-14 85.6 15.6 114 43-161 271-395 (566)
267 KOG1409|consensus 99.2 1.9E-09 4.2E-14 79.7 15.8 185 20-220 16-229 (404)
268 COG2706 3-carboxymuconate cycl 99.2 2.5E-07 5.5E-12 69.2 26.0 193 43-238 89-345 (346)
269 PRK00178 tolB translocation pr 99.2 6.9E-09 1.5E-13 83.4 19.2 151 66-239 180-340 (430)
270 COG4946 Uncharacterized protei 99.2 4.1E-08 9E-13 75.9 22.0 153 50-226 327-485 (668)
271 PF00400 WD40: WD domain, G-be 99.2 1.9E-10 4.1E-15 59.5 6.6 38 179-216 2-39 (39)
272 PF15492 Nbas_N: Neuroblastoma 99.2 5.7E-08 1.2E-12 70.5 21.2 181 44-227 45-268 (282)
273 KOG4532|consensus 99.2 9.2E-09 2E-13 73.9 16.9 164 55-239 84-260 (344)
274 PF13360 PQQ_2: PQQ-like domai 99.1 6.6E-08 1.4E-12 71.4 21.4 200 7-225 2-237 (238)
275 KOG4190|consensus 99.1 2.1E-10 4.5E-15 90.1 8.0 166 43-227 736-915 (1034)
276 KOG4714|consensus 99.1 1.8E-10 3.8E-15 82.1 6.8 143 54-219 100-255 (319)
277 TIGR02658 TTQ_MADH_Hv methylam 99.1 2.1E-07 4.5E-12 71.7 24.0 173 65-239 27-308 (352)
278 KOG2041|consensus 99.1 1.8E-09 3.9E-14 87.2 12.8 213 4-237 32-316 (1189)
279 KOG3914|consensus 99.1 4.7E-10 1E-14 84.3 8.8 103 60-163 127-231 (390)
280 COG2706 3-carboxymuconate cycl 99.1 8.7E-08 1.9E-12 71.6 20.2 183 5-219 13-222 (346)
281 KOG4190|consensus 99.1 6.4E-10 1.4E-14 87.4 9.5 181 1-221 750-951 (1034)
282 COG5354 Uncharacterized protei 99.1 5.3E-08 1.2E-12 75.7 18.8 193 8-220 53-308 (561)
283 KOG4714|consensus 99.1 1.6E-09 3.5E-14 77.3 9.6 130 85-216 180-316 (319)
284 PF00400 WD40: WD domain, G-be 99.1 1E-09 2.3E-14 56.6 6.7 38 117-154 2-39 (39)
285 PF04762 IKI3: IKI3 family; I 99.1 3.5E-07 7.6E-12 79.3 25.6 196 41-239 74-358 (928)
286 KOG0309|consensus 99.1 2.7E-09 5.9E-14 86.4 11.4 175 43-219 25-233 (1081)
287 PLN02919 haloacid dehalogenase 99.0 5.8E-07 1.3E-11 79.3 26.4 172 44-224 625-839 (1057)
288 KOG0882|consensus 99.0 8E-10 1.7E-14 84.4 7.4 200 5-227 27-240 (558)
289 PF08450 SGL: SMP-30/Gluconola 99.0 2.4E-06 5.1E-11 63.5 26.7 186 47-237 4-232 (246)
290 TIGR03300 assembly_YfgL outer 99.0 6.5E-07 1.4E-11 70.8 24.0 96 6-119 73-168 (377)
291 COG5170 CDC55 Serine/threonine 99.0 8.1E-09 1.8E-13 75.7 11.9 182 43-227 27-319 (460)
292 KOG2695|consensus 99.0 1.9E-09 4.1E-14 79.9 8.5 120 43-163 253-384 (425)
293 COG5354 Uncharacterized protei 99.0 1.7E-07 3.7E-12 73.0 18.3 176 5-220 199-397 (561)
294 KOG2314|consensus 99.0 1.7E-07 3.8E-12 73.8 18.0 193 43-239 250-502 (698)
295 KOG1275|consensus 99.0 3.3E-08 7.2E-13 81.9 14.7 158 54-216 146-340 (1118)
296 KOG1912|consensus 99.0 5.5E-07 1.2E-11 73.8 21.0 198 6-219 33-305 (1062)
297 KOG1832|consensus 99.0 2.2E-10 4.8E-15 94.3 2.0 173 43-227 1102-1300(1516)
298 PF08450 SGL: SMP-30/Gluconola 98.9 1.6E-06 3.4E-11 64.5 21.9 140 43-205 86-242 (246)
299 KOG1645|consensus 98.9 4.3E-08 9.3E-13 74.2 13.2 100 10-123 175-276 (463)
300 KOG2041|consensus 98.9 1.1E-08 2.4E-13 82.8 9.4 153 43-218 15-186 (1189)
301 PF06433 Me-amine-dh_H: Methyl 98.9 1.3E-05 2.8E-10 60.8 26.4 210 8-228 67-330 (342)
302 COG0823 TolB Periplasmic compo 98.8 6.1E-07 1.3E-11 71.3 17.0 160 43-224 193-364 (425)
303 PF07433 DUF1513: Protein of u 98.8 5E-06 1.1E-10 62.2 20.5 196 9-228 29-257 (305)
304 PF03178 CPSF_A: CPSF A subuni 98.8 5.5E-06 1.2E-10 64.1 21.7 192 8-235 2-230 (321)
305 KOG2066|consensus 98.8 3.2E-07 7E-12 75.2 14.8 144 54-218 82-233 (846)
306 PF11768 DUF3312: Protein of u 98.8 1.7E-06 3.8E-11 68.9 17.9 114 83-219 204-330 (545)
307 COG0823 TolB Periplasmic compo 98.7 2.6E-06 5.6E-11 67.8 17.5 121 8-146 218-345 (425)
308 KOG2066|consensus 98.7 3.5E-07 7.6E-12 75.0 12.7 150 43-228 40-197 (846)
309 PF06977 SdiA-regulated: SdiA- 98.7 1.7E-05 3.7E-10 58.4 19.8 175 43-228 22-210 (248)
310 PRK02888 nitrous-oxide reducta 98.7 6.1E-06 1.3E-10 67.4 18.8 92 64-156 295-404 (635)
311 PF11768 DUF3312: Protein of u 98.7 9.7E-07 2.1E-11 70.3 13.8 111 43-156 206-329 (545)
312 KOG2314|consensus 98.7 5.6E-07 1.2E-11 71.0 12.0 160 67-239 192-356 (698)
313 TIGR03300 assembly_YfgL outer 98.7 2E-05 4.3E-10 62.4 21.2 152 56-215 191-376 (377)
314 KOG1275|consensus 98.7 2.2E-07 4.8E-12 77.2 10.2 135 5-156 194-342 (1118)
315 KOG1334|consensus 98.7 2E-07 4.3E-12 72.3 9.2 127 82-226 140-271 (559)
316 KOG1008|consensus 98.7 5.9E-09 1.3E-13 83.2 0.6 175 43-239 57-253 (783)
317 PF04841 Vps16_N: Vps16, N-ter 98.6 1.7E-05 3.6E-10 63.3 20.0 187 9-238 62-268 (410)
318 PRK11138 outer membrane biogen 98.6 2.8E-05 6.1E-10 62.0 21.2 200 6-227 128-362 (394)
319 KOG1920|consensus 98.6 2.1E-05 4.6E-10 67.8 19.0 178 43-221 69-325 (1265)
320 PF04762 IKI3: IKI3 family; I 98.5 6.5E-05 1.4E-09 65.7 22.0 194 7-219 236-457 (928)
321 KOG1912|consensus 98.5 6.3E-06 1.4E-10 67.9 14.2 151 43-217 16-185 (1062)
322 KOG0882|consensus 98.5 3.3E-06 7.1E-11 65.3 11.8 211 7-231 75-318 (558)
323 KOG2114|consensus 98.5 6E-05 1.3E-09 62.9 19.2 164 43-227 65-252 (933)
324 COG5170 CDC55 Serine/threonine 98.5 4E-06 8.6E-11 62.0 10.9 175 43-217 86-366 (460)
325 KOG3617|consensus 98.5 7E-06 1.5E-10 68.4 13.2 109 45-156 18-131 (1416)
326 COG3391 Uncharacterized conser 98.5 0.00034 7.3E-09 55.5 22.5 186 5-227 93-292 (381)
327 PF14783 BBS2_Mid: Ciliary BBS 98.4 8.6E-05 1.9E-09 46.9 14.9 101 45-151 2-109 (111)
328 PF07433 DUF1513: Protein of u 98.4 0.00035 7.5E-09 52.6 21.7 159 43-210 5-184 (305)
329 KOG4640|consensus 98.4 2.5E-06 5.4E-11 68.5 9.4 93 126-239 20-115 (665)
330 PF13360 PQQ_2: PQQ-like domai 98.4 7.2E-05 1.6E-09 55.2 16.1 142 64-228 2-150 (238)
331 COG3386 Gluconolactonase [Carb 98.3 0.00058 1.2E-08 52.2 21.0 177 43-237 66-262 (307)
332 KOG1832|consensus 98.3 7.1E-07 1.5E-11 74.4 4.8 144 78-227 1094-1264(1516)
333 PRK02888 nitrous-oxide reducta 98.3 0.0002 4.4E-09 58.9 18.1 146 63-219 213-405 (635)
334 smart00320 WD40 WD40 repeats. 98.3 4.4E-06 9.5E-11 42.0 5.9 38 179-216 3-40 (40)
335 KOG2114|consensus 98.3 0.00015 3.3E-09 60.7 17.1 173 49-239 30-224 (933)
336 PF08553 VID27: VID27 cytoplas 98.3 5.9E-05 1.3E-09 63.9 14.9 142 54-217 492-646 (794)
337 KOG1645|consensus 98.3 4.9E-06 1.1E-10 63.4 7.6 88 67-156 175-266 (463)
338 KOG3621|consensus 98.3 0.00033 7.1E-09 57.5 18.0 111 45-156 36-154 (726)
339 PF06433 Me-amine-dh_H: Methyl 98.2 0.0011 2.5E-08 50.6 22.8 210 8-238 17-297 (342)
340 PRK11138 outer membrane biogen 98.2 0.00045 9.6E-09 55.2 18.2 142 6-156 77-223 (394)
341 KOG1008|consensus 98.2 5E-07 1.1E-11 72.6 1.2 155 43-218 103-275 (783)
342 KOG4649|consensus 98.2 0.0012 2.5E-08 48.2 19.9 112 50-163 18-131 (354)
343 PF04053 Coatomer_WDAD: Coatom 98.1 0.00014 3E-09 58.4 13.7 139 43-217 33-172 (443)
344 smart00320 WD40 WD40 repeats. 98.1 1.6E-05 3.5E-10 39.7 5.8 38 117-154 3-40 (40)
345 PF15492 Nbas_N: Neuroblastoma 98.1 0.0008 1.7E-08 49.5 16.0 136 90-239 3-157 (282)
346 KOG3621|consensus 98.1 6.4E-05 1.4E-09 61.5 11.4 121 83-219 32-155 (726)
347 KOG3617|consensus 98.1 6.3E-06 1.4E-10 68.7 5.9 110 87-219 18-132 (1416)
348 COG3391 Uncharacterized conser 98.1 0.0025 5.5E-08 50.6 20.2 162 46-225 77-246 (381)
349 KOG4640|consensus 98.1 2.5E-05 5.5E-10 62.9 8.8 91 43-136 21-115 (665)
350 PF00930 DPPIV_N: Dipeptidyl p 98.1 0.00037 8.1E-09 54.7 15.3 158 64-222 22-222 (353)
351 cd00216 PQQ_DH Dehydrogenases 98.1 0.0037 8E-08 51.4 21.1 199 5-232 172-438 (488)
352 PF08553 VID27: VID27 cytoplas 98.1 0.00026 5.6E-09 60.2 14.4 136 6-156 502-647 (794)
353 PF03178 CPSF_A: CPSF A subuni 98.0 0.004 8.6E-08 48.3 20.4 131 8-156 62-202 (321)
354 PF08596 Lgl_C: Lethal giant l 98.0 0.0049 1.1E-07 49.0 22.9 181 44-228 3-300 (395)
355 KOG2395|consensus 98.0 0.00029 6.2E-09 56.2 12.2 139 57-217 348-499 (644)
356 COG3490 Uncharacterized protei 97.9 0.0027 5.8E-08 47.1 16.1 163 43-208 68-245 (366)
357 PRK13616 lipoprotein LpqB; Pro 97.9 0.0025 5.4E-08 53.3 17.8 106 43-152 350-472 (591)
358 PF14783 BBS2_Mid: Ciliary BBS 97.9 0.0019 4.1E-08 40.9 15.4 99 87-213 2-109 (111)
359 KOG4649|consensus 97.9 0.0053 1.1E-07 45.0 20.3 65 55-120 63-129 (354)
360 KOG2079|consensus 97.9 0.00095 2.1E-08 57.6 14.2 100 54-156 98-203 (1206)
361 cd00216 PQQ_DH Dehydrogenases 97.8 0.011 2.4E-07 48.7 20.0 208 6-227 69-328 (488)
362 PF04053 Coatomer_WDAD: Coatom 97.8 0.0079 1.7E-07 48.6 18.1 134 55-218 117-262 (443)
363 KOG2444|consensus 97.8 3.7E-05 8.1E-10 54.6 4.5 140 57-219 32-178 (238)
364 PF00780 CNH: CNH domain; Int 97.7 0.01 2.2E-07 44.9 23.5 178 43-230 36-267 (275)
365 PF00780 CNH: CNH domain; Int 97.7 0.012 2.6E-07 44.5 19.1 149 54-224 6-171 (275)
366 PF12894 Apc4_WD40: Anaphase-p 97.7 0.00021 4.5E-09 37.9 5.1 35 188-223 11-45 (47)
367 PF10647 Gmad1: Lipoprotein Lp 97.6 0.014 2.9E-07 43.7 18.0 150 44-208 25-185 (253)
368 PF00930 DPPIV_N: Dipeptidyl p 97.6 0.02 4.3E-07 45.1 20.4 80 7-103 22-119 (353)
369 KOG2079|consensus 97.6 0.00047 1E-08 59.3 9.0 62 95-156 98-160 (1206)
370 KOG1920|consensus 97.6 0.0045 9.8E-08 54.3 14.1 130 46-180 199-350 (1265)
371 PF15390 DUF4613: Domain of un 97.5 0.0097 2.1E-07 48.6 15.0 151 43-219 20-187 (671)
372 COG3204 Uncharacterized protei 97.5 0.02 4.3E-07 42.8 16.1 170 43-225 86-269 (316)
373 KOG1916|consensus 97.5 6.2E-05 1.3E-09 63.4 2.7 110 8-156 153-265 (1283)
374 PF06977 SdiA-regulated: SdiA- 97.3 0.038 8.1E-07 41.0 21.1 183 5-215 41-247 (248)
375 PF12894 Apc4_WD40: Anaphase-p 97.3 0.0014 3E-08 34.7 5.3 31 126-156 11-41 (47)
376 KOG2395|consensus 97.2 0.01 2.2E-07 47.8 11.7 132 7-156 355-500 (644)
377 KOG4499|consensus 97.2 0.044 9.6E-07 39.7 14.9 140 84-237 108-261 (310)
378 PHA02713 hypothetical protein; 97.2 0.033 7.1E-07 46.7 14.7 149 54-221 351-536 (557)
379 PF12234 Rav1p_C: RAVE protein 97.1 0.042 9E-07 46.1 14.9 119 86-217 31-155 (631)
380 KOG2444|consensus 97.1 0.0034 7.3E-08 44.9 7.1 102 54-156 69-177 (238)
381 COG3386 Gluconolactonase [Carb 97.0 0.093 2E-06 40.4 17.3 140 44-206 112-273 (307)
382 PF08596 Lgl_C: Lethal giant l 97.0 0.028 6.1E-07 44.8 12.4 110 128-238 3-144 (395)
383 PRK13616 lipoprotein LpqB; Pro 97.0 0.13 2.9E-06 43.3 16.6 107 45-156 399-525 (591)
384 KOG2280|consensus 97.0 0.03 6.5E-07 47.1 12.4 191 8-238 64-268 (829)
385 PF04841 Vps16_N: Vps16, N-ter 96.9 0.16 3.5E-06 40.9 20.4 38 126-163 216-254 (410)
386 PF05694 SBP56: 56kDa selenium 96.9 0.091 2E-06 41.9 13.7 126 8-145 222-392 (461)
387 TIGR03074 PQQ_membr_DH membran 96.8 0.29 6.2E-06 42.7 23.4 213 6-227 202-486 (764)
388 PF14870 PSII_BNR: Photosynthe 96.8 0.16 3.4E-06 39.0 15.0 149 43-215 145-301 (302)
389 COG5167 VID27 Protein involved 96.7 0.074 1.6E-06 43.0 12.4 142 54-218 478-632 (776)
390 PF14761 HPS3_N: Hermansky-Pud 96.7 0.13 2.7E-06 37.0 15.1 130 86-220 19-165 (215)
391 PF14781 BBS2_N: Ciliary BBSom 96.7 0.083 1.8E-06 34.8 13.1 106 48-156 4-125 (136)
392 KOG4441|consensus 96.5 0.35 7.6E-06 40.8 16.0 149 54-220 380-548 (571)
393 TIGR02604 Piru_Ver_Nterm putat 96.5 0.31 6.7E-06 38.7 17.6 161 43-209 14-204 (367)
394 PF10168 Nup88: Nuclear pore c 96.5 0.33 7.2E-06 41.9 15.6 72 85-156 85-179 (717)
395 COG3204 Uncharacterized protei 96.5 0.19 4E-06 37.9 12.3 125 83-218 84-210 (316)
396 PF14727 PHTB1_N: PTHB1 N-term 96.5 0.35 7.6E-06 38.9 18.8 145 52-217 34-203 (418)
397 PF02897 Peptidase_S9_N: Proly 96.4 0.37 8E-06 38.9 24.4 182 8-227 150-366 (414)
398 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.4 0.45 9.7E-06 39.8 22.6 222 6-231 179-503 (527)
399 COG3490 Uncharacterized protei 96.4 0.094 2E-06 39.3 10.5 114 75-208 58-181 (366)
400 PF12234 Rav1p_C: RAVE protein 96.4 0.39 8.5E-06 40.6 15.2 111 43-156 30-156 (631)
401 PHA03098 kelch-like protein; P 96.4 0.48 1E-05 39.7 17.2 59 54-113 342-414 (534)
402 PF10313 DUF2415: Uncharacteri 96.4 0.027 5.9E-07 29.0 5.5 33 43-75 1-35 (43)
403 TIGR02276 beta_rpt_yvtn 40-res 96.3 0.032 6.9E-07 28.5 6.0 41 198-238 1-42 (42)
404 PF07569 Hira: TUP1-like enhan 96.3 0.055 1.2E-06 39.5 9.0 60 54-113 21-95 (219)
405 PF05694 SBP56: 56kDa selenium 96.3 0.43 9.4E-06 38.2 18.1 137 8-156 157-342 (461)
406 KOG3630|consensus 96.3 0.037 8E-07 48.7 8.9 144 43-205 101-260 (1405)
407 KOG2377|consensus 96.3 0.081 1.7E-06 42.2 10.0 121 33-155 57-184 (657)
408 TIGR02604 Piru_Ver_Nterm putat 96.1 0.52 1.1E-05 37.4 14.5 108 85-207 14-142 (367)
409 PF02897 Peptidase_S9_N: Proly 96.0 0.66 1.4E-05 37.4 19.1 110 45-156 126-260 (414)
410 PHA02713 hypothetical protein; 95.9 0.87 1.9E-05 38.4 17.6 90 54-148 303-409 (557)
411 PF05096 Glu_cyclase_2: Glutam 95.9 0.49 1.1E-05 35.3 22.6 175 43-239 45-240 (264)
412 KOG4441|consensus 95.9 0.95 2.1E-05 38.3 15.3 101 45-150 325-440 (571)
413 PF10313 DUF2415: Uncharacteri 95.8 0.073 1.6E-06 27.4 5.5 31 189-219 1-34 (43)
414 TIGR03075 PQQ_enz_alc_DH PQQ-d 95.8 0.93 2E-05 38.0 21.0 205 6-225 77-340 (527)
415 PRK13684 Ycf48-like protein; P 95.7 0.76 1.6E-05 36.0 15.8 148 43-216 173-329 (334)
416 KOG1897|consensus 95.7 1.4 3E-05 38.9 19.2 178 8-217 750-941 (1096)
417 PLN00033 photosystem II stabil 95.6 0.9 2E-05 36.5 18.2 142 45-215 241-396 (398)
418 PF07995 GSDH: Glucose / Sorbo 95.6 0.8 1.7E-05 35.8 15.0 52 86-137 3-59 (331)
419 KOG2377|consensus 95.6 0.26 5.7E-06 39.5 10.2 135 46-203 26-168 (657)
420 KOG1900|consensus 95.5 0.21 4.5E-06 44.9 10.5 134 6-156 97-272 (1311)
421 COG5167 VID27 Protein involved 95.5 0.47 1E-05 38.7 11.3 132 6-156 488-632 (776)
422 PF10647 Gmad1: Lipoprotein Lp 95.4 0.77 1.7E-05 34.4 16.5 134 86-239 25-175 (253)
423 KOG4460|consensus 95.3 1 2.2E-05 37.0 12.6 92 128-223 105-203 (741)
424 PF14761 HPS3_N: Hermansky-Pud 95.3 0.73 1.6E-05 33.2 17.4 150 56-218 29-214 (215)
425 PF15390 DUF4613: Domain of un 95.3 0.5 1.1E-05 39.2 11.1 114 43-156 57-186 (671)
426 PF08728 CRT10: CRT10; InterP 95.3 0.48 1E-05 40.6 11.4 113 44-156 102-246 (717)
427 COG3823 Glutamine cyclotransfe 95.2 0.8 1.7E-05 32.9 12.7 172 8-207 68-248 (262)
428 PF11715 Nup160: Nucleoporin N 95.1 0.28 6.1E-06 41.2 9.9 38 190-227 216-257 (547)
429 KOG2247|consensus 95.0 0.0021 4.6E-08 51.0 -2.7 141 45-210 37-180 (615)
430 KOG3630|consensus 94.8 0.12 2.6E-06 45.8 6.8 99 43-143 156-260 (1405)
431 TIGR03118 PEPCTERM_chp_1 conse 94.7 1.4 3.1E-05 33.6 20.4 182 43-227 23-288 (336)
432 KOG1916|consensus 94.6 0.017 3.7E-07 49.6 1.5 113 82-217 130-264 (1283)
433 PF07569 Hira: TUP1-like enhan 94.6 0.22 4.8E-06 36.3 7.1 77 134-218 18-95 (219)
434 PF14655 RAB3GAP2_N: Rab3 GTPa 94.4 1.4 3E-05 35.6 11.4 99 124-228 305-408 (415)
435 PF10168 Nup88: Nuclear pore c 94.2 2.9 6.3E-05 36.4 13.8 115 6-122 40-188 (717)
436 PF05096 Glu_cyclase_2: Glutam 94.2 1.8 3.8E-05 32.5 21.2 130 8-156 68-203 (264)
437 PF08728 CRT10: CRT10; InterP 94.2 3.4 7.4E-05 35.7 15.7 144 55-217 49-245 (717)
438 PF12768 Rax2: Cortical protei 94.0 2 4.4E-05 32.7 12.8 98 1-113 7-123 (281)
439 PF14870 PSII_BNR: Photosynthe 93.5 2.8 6E-05 32.4 19.7 137 82-237 142-283 (302)
440 PF14583 Pectate_lyase22: Olig 93.4 3.3 7.2E-05 32.9 19.9 190 7-217 167-380 (386)
441 PHA03098 kelch-like protein; P 93.3 3.9 8.5E-05 34.3 13.1 59 54-113 294-366 (534)
442 KOG4499|consensus 93.3 2.4 5.2E-05 31.2 14.4 94 85-198 158-263 (310)
443 PHA02790 Kelch-like protein; P 93.3 4.1 8.9E-05 33.8 17.0 60 54-113 318-384 (480)
444 TIGR02276 beta_rpt_yvtn 40-res 93.3 0.44 9.6E-06 24.1 4.9 38 55-92 4-41 (42)
445 PF14655 RAB3GAP2_N: Rab3 GTPa 93.2 3.2 6.8E-05 33.6 11.6 38 43-81 308-345 (415)
446 PF12657 TFIIIC_delta: Transcr 92.8 0.99 2.1E-05 31.6 7.5 29 128-156 87-121 (173)
447 PF12768 Rax2: Cortical protei 92.6 3.6 7.8E-05 31.4 12.0 111 105-237 16-144 (281)
448 PF01011 PQQ: PQQ enzyme repea 92.5 0.53 1.2E-05 23.5 4.4 30 202-231 2-31 (38)
449 PF03088 Str_synth: Strictosid 92.5 1.4 3E-05 27.0 6.9 43 61-103 33-75 (89)
450 PF14781 BBS2_N: Ciliary BBSom 92.4 2.2 4.7E-05 28.3 12.5 114 90-226 4-133 (136)
451 COG5290 IkappaB kinase complex 92.2 1.2 2.5E-05 38.6 8.2 90 47-138 251-348 (1243)
452 PF10214 Rrn6: RNA polymerase 92.0 8.3 0.00018 34.2 18.7 111 43-156 146-276 (765)
453 PF07250 Glyoxal_oxid_N: Glyox 92.0 4 8.7E-05 30.4 12.1 145 67-227 48-206 (243)
454 KOG1983|consensus 91.9 2.9 6.4E-05 37.9 10.9 31 43-74 36-66 (993)
455 PF08801 Nucleoporin_N: Nup133 91.8 2.3 4.9E-05 34.6 9.5 29 128-156 191-219 (422)
456 smart00564 PQQ beta-propeller 91.4 0.76 1.7E-05 21.8 4.1 25 202-226 8-32 (33)
457 KOG1900|consensus 91.4 4 8.7E-05 37.4 10.8 154 62-219 96-273 (1311)
458 PF03022 MRJP: Major royal jel 91.3 5.4 0.00012 30.6 19.7 141 8-156 34-215 (287)
459 PF07250 Glyoxal_oxid_N: Glyox 91.0 5.2 0.00011 29.8 10.3 105 49-156 73-197 (243)
460 KOG3616|consensus 90.9 5.4 0.00012 34.7 10.7 130 43-177 15-154 (1636)
461 COG4590 ABC-type uncharacteriz 90.7 2.3 5.1E-05 34.4 8.1 156 43-222 221-390 (733)
462 PF07995 GSDH: Glucose / Sorbo 90.3 7.5 0.00016 30.5 13.0 100 44-146 3-133 (331)
463 PF10214 Rrn6: RNA polymerase 90.1 13 0.00028 33.0 18.2 129 82-222 77-236 (765)
464 TIGR02171 Fb_sc_TIGR02171 Fibr 89.3 4.7 0.0001 35.7 9.4 79 64-142 328-414 (912)
465 PF12657 TFIIIC_delta: Transcr 89.1 5.4 0.00012 27.9 8.3 30 189-218 86-121 (173)
466 PF14727 PHTB1_N: PTHB1 N-term 88.9 11 0.00025 30.6 21.6 176 6-222 153-364 (418)
467 KOG1898|consensus 88.0 21 0.00045 32.5 18.2 133 9-156 854-1004(1205)
468 PRK13684 Ycf48-like protein; P 88.0 11 0.00025 29.5 16.3 108 83-213 171-283 (334)
469 PF07676 PD40: WD40-like Beta 87.8 2.2 4.8E-05 21.1 5.5 32 122-153 4-38 (39)
470 KOG1897|consensus 87.6 21 0.00046 32.2 19.7 149 48-217 454-612 (1096)
471 PLN00033 photosystem II stabil 87.4 14 0.0003 29.9 13.0 105 43-153 281-396 (398)
472 PF10433 MMS1_N: Mono-function 87.1 17 0.00036 30.5 23.4 193 43-239 256-503 (504)
473 PHA02790 Kelch-like protein; P 87.0 16 0.00036 30.3 13.7 100 54-156 271-384 (480)
474 PF11715 Nup160: Nucleoporin N 86.6 2.3 4.9E-05 35.9 6.1 39 43-81 215-256 (547)
475 PF01436 NHL: NHL repeat; Int 85.8 2.4 5.1E-05 19.4 4.4 25 191-215 4-28 (28)
476 PF13449 Phytase-like: Esteras 85.7 15 0.00033 28.7 13.8 70 129-207 87-165 (326)
477 PF05935 Arylsulfotrans: Aryls 84.9 21 0.00046 29.7 15.9 161 63-227 126-310 (477)
478 PF10395 Utp8: Utp8 family; I 84.8 25 0.00055 30.4 15.6 173 42-233 129-320 (670)
479 TIGR02171 Fb_sc_TIGR02171 Fibr 84.5 13 0.00027 33.3 9.4 51 105-156 329-385 (912)
480 KOG1896|consensus 83.5 38 0.00082 31.5 16.1 117 43-163 1098-1220(1366)
481 KOG2247|consensus 82.8 0.25 5.4E-06 39.9 -1.0 107 43-151 75-183 (615)
482 COG3823 Glutamine cyclotransfe 82.7 16 0.00035 26.6 11.4 99 54-156 55-158 (262)
483 TIGR03606 non_repeat_PQQ dehyd 81.9 28 0.0006 28.8 13.1 55 84-138 29-90 (454)
484 KOG3522|consensus 81.2 11 0.00023 33.2 7.6 145 56-227 548-706 (925)
485 PF13449 Phytase-like: Esteras 80.6 25 0.00055 27.5 17.1 103 43-148 20-168 (326)
486 COG4590 ABC-type uncharacteriz 80.0 17 0.00037 29.8 8.0 71 43-114 317-387 (733)
487 PF14583 Pectate_lyase22: Olig 79.4 31 0.00067 27.7 21.2 140 66-223 169-333 (386)
488 TIGR03032 conserved hypothetic 79.3 28 0.0006 27.1 12.2 105 11-137 188-315 (335)
489 KOG4460|consensus 78.7 38 0.00083 28.4 10.7 72 85-156 104-198 (741)
490 PF12341 DUF3639: Protein of u 78.5 5.2 0.00011 18.3 3.5 26 43-71 2-27 (27)
491 PF13570 PQQ_3: PQQ-like domai 78.2 6.8 0.00015 19.5 4.6 21 54-74 20-40 (40)
492 KOG2280|consensus 77.7 35 0.00076 29.9 9.5 72 64-138 63-139 (829)
493 PF05935 Arylsulfotrans: Aryls 77.5 41 0.00088 28.1 11.5 109 96-227 115-240 (477)
494 TIGR03074 PQQ_membr_DH membran 77.1 54 0.0012 29.3 15.7 19 209-227 335-353 (764)
495 PF08954 DUF1900: Domain of un 76.9 20 0.00042 24.1 6.6 51 189-239 11-66 (136)
496 smart00036 CNH Domain found in 76.0 34 0.00075 26.5 13.0 108 44-153 2-128 (302)
497 TIGR03606 non_repeat_PQQ dehyd 74.9 47 0.001 27.5 14.9 53 43-96 30-90 (454)
498 PRK10115 protease 2; Provision 73.5 64 0.0014 28.4 24.5 67 46-113 175-255 (686)
499 COG5308 NUP170 Nuclear pore co 71.3 17 0.00036 32.5 6.3 155 62-219 99-276 (1263)
500 PF01731 Arylesterase: Arylest 71.0 21 0.00045 21.7 6.2 49 65-115 36-86 (86)
No 1
>KOG0271|consensus
Probab=100.00 E-value=1.3e-42 Score=253.82 Aligned_cols=218 Identities=20% Similarity=0.323 Sum_probs=196.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-ee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-SV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~-~ 82 (239)
+.|.++|+||+.+..+..+.++|. ..|.|++|+| ++..|++|+.||+|++||.++++++- .+ +
T Consensus 134 sGD~TvR~WD~~TeTp~~t~KgH~--------------~WVlcvawsP-Dgk~iASG~~dg~I~lwdpktg~~~g~~l~g 198 (480)
T KOG0271|consen 134 SGDTTVRLWDLDTETPLFTCKGHK--------------NWVLCVAWSP-DGKKIASGSKDGSIRLWDPKTGQQIGRALRG 198 (480)
T ss_pred CCCceEEeeccCCCCcceeecCCc--------------cEEEEEEECC-CcchhhccccCCeEEEecCCCCCcccccccC
Confidence 347899999999999999999999 9999999999 89999999999999999999988765 44 7
Q ss_pred CCCCEEEEEEec-----CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 83 HGSPVESVLCLP-----SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 83 ~~~~v~~~~~~~-----~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
|...|++++|.| ..+++++++ ||.++|||+. .+..+..+.+|..+|+|++|--+ .+|++|+.|++|++|+..
T Consensus 199 H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~-~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~ 276 (480)
T KOG0271|consen 199 HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK-LGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRAL 276 (480)
T ss_pred cccceeEEeecccccCCCccceecccCCCCEEEEEcc-CceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEcc
Confidence 999999999986 567888888 8999999998 88899999999999999999644 589999999999999986
Q ss_pred -cceEeee----------------------------------------------------------ecceeEEEEEccCC
Q psy11036 157 -LKTVSSF----------------------------------------------------------TGGLDVCIWDMLGG 177 (239)
Q Consensus 157 -~~~~~~~----------------------------------------------------------~~~~~i~~~d~~~~ 177 (239)
+.+..++ +.+.++.+|+....
T Consensus 277 dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~ 356 (480)
T KOG0271|consen 277 DGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS 356 (480)
T ss_pred chhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccc
Confidence 4433333 23455999999988
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+++..+.+|..-|..+.||||++++|++|.|+.|++||.++|+.+.++. |-++|+.++|+.
T Consensus 357 kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsa 419 (480)
T KOG0271|consen 357 KKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSA 419 (480)
T ss_pred ccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEecc
Confidence 89999999999999999999999999999999999999999999999999 999999999973
No 2
>KOG0272|consensus
Probab=100.00 E-value=1.4e-41 Score=250.87 Aligned_cols=201 Identities=24% Similarity=0.393 Sum_probs=189.2
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.+.||++++|++++..++..+.+|. ..|..++|+| +|++|+|++.|.+-++||++++......
T Consensus 236 t~s~Dgtvklw~~~~e~~l~~l~gH~--------------~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QE 300 (459)
T KOG0272|consen 236 TASADGTVKLWKLSQETPLQDLEGHL--------------ARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQE 300 (459)
T ss_pred eeccCCceeeeccCCCcchhhhhcch--------------hhheeeeecC-CCceeeecccccchhhcccccchhhHhhc
Confidence 45679999999999999999999999 9999999999 8999999999999999999999887766
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
+|...|.+++|.|+|.++++|+ |..-+|||++ ++..+..+.+|..+|.+++|+|+|..||+|+.|++++|||++
T Consensus 301 GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlR-tgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR---- 375 (459)
T KOG0272|consen 301 GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLR-TGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR---- 375 (459)
T ss_pred ccccccceeEecCCCceeeccCccchhheeecc-cCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec----
Confidence 7999999999999999999999 8889999999 899999999999999999999999999999999999999999
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
....+..+.+|..-|+.++|+| .|.+|+|+|.|++++||...++.+++++. |++.|.+++++
T Consensus 376 ----------------~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis 439 (459)
T KOG0272|consen 376 ----------------MRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDIS 439 (459)
T ss_pred ----------------ccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEec
Confidence 4455777799999999999999 78999999999999999999999999998 99999999987
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 440 ~ 440 (459)
T KOG0272|consen 440 P 440 (459)
T ss_pred c
Confidence 6
No 3
>KOG0272|consensus
Probab=100.00 E-value=8.1e-41 Score=246.81 Aligned_cols=198 Identities=23% Similarity=0.344 Sum_probs=186.6
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeee-cCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~ 84 (239)
+|.++||+..+...+++|.+|. +.|.++.|+|. ++..+++|+.||++++|++.+..++..+ +|.
T Consensus 196 sG~~kvW~~~~~~~~~~l~gH~--------------~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~ 261 (459)
T KOG0272|consen 196 SGLVKVWSVPQCNLLQTLRGHT--------------SRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHL 261 (459)
T ss_pred CCceeEeecCCcceeEEEeccc--------------cceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcch
Confidence 5999999999999999999999 99999999996 3679999999999999999998888888 799
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
..|..++|+|+|++|++++ |.+-++||++ ++..+....+|...|.+++|++||..+++|+.|..-+|||++
T Consensus 262 ~RVs~VafHPsG~~L~TasfD~tWRlWD~~-tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlR------- 333 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASFDSTWRLWDLE-TKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLR------- 333 (459)
T ss_pred hhheeeeecCCCceeeecccccchhhcccc-cchhhHhhcccccccceeEecCCCceeeccCccchhheeecc-------
Confidence 9999999999999999999 9999999999 777777788999999999999999999999999999999998
Q ss_pred ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 164 ~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++.++..+.+|..+|.++.|+|+|..|||||.|++++|||++..+.+..++ |.+-|+.+.|+|
T Consensus 334 -------------tgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p 397 (459)
T KOG0272|consen 334 -------------TGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSP 397 (459)
T ss_pred -------------cCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecc
Confidence 677788889999999999999999999999999999999999999999998 888999999987
No 4
>KOG0279|consensus
Probab=100.00 E-value=3e-38 Score=222.16 Aligned_cols=200 Identities=20% Similarity=0.296 Sum_probs=182.4
Q ss_pred CCCCCCEEEEeeCCC-----cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 3 HDLPILIVALWDIPS-----EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
+.++|..+.+|++.. |.+++.+.+|. ..|..+..++ ++++.++++.|+++++||+.+++.
T Consensus 33 sasrDk~ii~W~L~~dd~~~G~~~r~~~GHs--------------H~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~~ 97 (315)
T KOG0279|consen 33 SASRDKTIIVWKLTSDDIKYGVPVRRLTGHS--------------HFVSDVVLSS-DGNFALSASWDGTLRLWDLATGES 97 (315)
T ss_pred EcccceEEEEEEeccCccccCceeeeeeccc--------------eEecceEEcc-CCceEEeccccceEEEEEecCCcE
Confidence 557899999998753 67788999998 8899999999 899999999999999999999998
Q ss_pred eeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEecc--CCceEEEEEcCC--CCEEEEEecCCeEE
Q psy11036 78 VMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCH--HKTVTSLCLASG--GKRLISASLDHHAK 151 (239)
Q Consensus 78 ~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~i~~i~~~~~--~~~l~~~~~d~~i~ 151 (239)
.+.| +|...|.+++|+|+.+.+++|+ |.+|++|+.. +....++..+ .+-|.+++|+|+ ..+|++++.|++|+
T Consensus 98 t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~--g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 98 TRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL--GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVK 175 (315)
T ss_pred EEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec--ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEE
Confidence 8888 8999999999999999999999 9999999996 4455555443 789999999997 67999999999999
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 231 (239)
+||++ +.+....+.+|++.++.+++||||.+.++|+.||.+.+||+..++.+.++.+...
T Consensus 176 vWnl~--------------------~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~ 235 (315)
T KOG0279|consen 176 VWNLR--------------------NCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDI 235 (315)
T ss_pred EEccC--------------------CcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCe
Confidence 99998 5667777889999999999999999999999999999999999999999999999
Q ss_pred eeeeEecC
Q psy11036 232 VLSIDVSM 239 (239)
Q Consensus 232 v~~~~~sp 239 (239)
|++++|+|
T Consensus 236 v~sl~fsp 243 (315)
T KOG0279|consen 236 VNSLCFSP 243 (315)
T ss_pred EeeEEecC
Confidence 99999998
No 5
>KOG0271|consensus
Probab=100.00 E-value=4.3e-38 Score=230.21 Aligned_cols=202 Identities=22% Similarity=0.351 Sum_probs=186.0
Q ss_pred CCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.+.+.||.|+|||+..++++..+.+|+ .+|+|+.|- +..++++|+.|++|++|+...|.....+
T Consensus 221 as~skDg~vrIWd~~~~~~~~~lsgHT--------------~~VTCvrwG--G~gliySgS~DrtIkvw~a~dG~~~r~l 284 (480)
T KOG0271|consen 221 ASSSKDGSVRIWDTKLGTCVRTLSGHT--------------ASVTCVRWG--GEGLIYSGSQDRTIKVWRALDGKLCREL 284 (480)
T ss_pred ecccCCCCEEEEEccCceEEEEeccCc--------------cceEEEEEc--CCceEEecCCCceEEEEEccchhHHHhh
Confidence 456779999999999999999999999 999999996 4679999999999999999999988888
Q ss_pred -cCCCCEEEEEEe-----------cCCc-------------------------EEEEeC-CCcEEEEEccCCCeEEEEEe
Q psy11036 82 -NHGSPVESVLCL-----------PSGG-------------------------IFVTGG-GLDVCIWDMLGGGKLLHKFT 123 (239)
Q Consensus 82 -~~~~~v~~~~~~-----------~~~~-------------------------~l~~~~-~~~i~~~d~~~~~~~~~~~~ 123 (239)
+|...|+.++.+ |.+. .+++++ |.++.+|+.....+++.++.
T Consensus 285 kGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmt 364 (480)
T KOG0271|consen 285 KGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMT 364 (480)
T ss_pred cccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhh
Confidence 788889888776 3233 489998 59999999987888999999
Q ss_pred ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE
Q psy11036 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203 (239)
Q Consensus 124 ~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 203 (239)
+|...|..+.|+||++++|+++.|..|++||.+ +++.+..+++|-.+|..++|+.|.++|
T Consensus 365 gHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~--------------------tGk~lasfRGHv~~VYqvawsaDsRLl 424 (480)
T KOG0271|consen 365 GHQALVNHVSFSPDGRYIASASFDKSVKLWDGR--------------------TGKFLASFRGHVAAVYQVAWSADSRLL 424 (480)
T ss_pred chhhheeeEEECCCccEEEEeecccceeeeeCC--------------------CcchhhhhhhccceeEEEEeccCccEE
Confidence 999999999999999999999999999999988 678888889999999999999999999
Q ss_pred EEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 204 ISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 204 ~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++||.|.++++||+++.+....++ |...|.+++|+|
T Consensus 425 VS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwsp 461 (480)
T KOG0271|consen 425 VSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSP 461 (480)
T ss_pred EEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecC
Confidence 999999999999999999999999 999999999998
No 6
>KOG0263|consensus
Probab=100.00 E-value=1.8e-36 Score=238.96 Aligned_cols=179 Identities=25% Similarity=0.403 Sum_probs=170.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.|++||+|.+++...+-.+++|. .+|..+.|+| .|.+++|++.|++.++|.....++.+.+ +|
T Consensus 470 SED~svRLWsl~t~s~~V~y~GH~--------------~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifagh 534 (707)
T KOG0263|consen 470 SEDSSVRLWSLDTWSCLVIYKGHL--------------APVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFAGH 534 (707)
T ss_pred cCCcceeeeecccceeEEEecCCC--------------cceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhccc
Confidence 578999999999999999999999 9999999999 7999999999999999999999998888 79
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
-+.|.|+.|+|+..++++|+ |.++++||+. ++..++.|.+|.++|.+++|+|+|++|++|+.|+.|++||+.
T Consensus 535 lsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~-~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~------ 607 (707)
T KOG0263|consen 535 LSDVDCVSFHPNSNYVATGSSDRTVRLWDVS-TGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA------ 607 (707)
T ss_pred ccccceEEECCcccccccCCCCceEEEEEcC-CCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC------
Confidence 99999999999999999999 8999999999 899999999999999999999999999999999999999998
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.+.++..+.+|++.|.++.||.+|..||+|+.|.+|++||+..
T Consensus 608 --------------~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 608 --------------NGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred --------------CCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 5677778899999999999999999999999999999999854
No 7
>KOG0263|consensus
Probab=100.00 E-value=1.8e-36 Score=238.94 Aligned_cols=175 Identities=24% Similarity=0.342 Sum_probs=166.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
++|..+.|+| +.++|++++.|+++|+|.+.+...+..+ +|..||..+.|+|.|-++++++ |++-++|... ..++++
T Consensus 452 GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d-~~~PlR 529 (707)
T KOG0263|consen 452 GPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTD-HNKPLR 529 (707)
T ss_pred Cceeeeeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecc-cCCchh
Confidence 9999999999 8999999999999999999999988877 7999999999999999999999 8999999998 788999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
.+.+|.+.|.|+.|+|++.++++|+.|.+|++||+. .+..++.+.+|.++|.+++|||+|
T Consensus 530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~--------------------~G~~VRiF~GH~~~V~al~~Sp~G 589 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS--------------------TGNSVRIFTGHKGPVTALAFSPCG 589 (707)
T ss_pred hhcccccccceEEECCcccccccCCCCceEEEEEcC--------------------CCcEEEEecCCCCceEEEEEcCCC
Confidence 999999999999999999999999999999999988 567777889999999999999999
Q ss_pred CeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++|++|+.||.|.+||+.+++++..+. |.+.|.++.||+
T Consensus 590 r~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~ 629 (707)
T KOG0263|consen 590 RYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSR 629 (707)
T ss_pred ceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEec
Confidence 999999999999999999999999887 888999999984
No 8
>KOG0295|consensus
Probab=100.00 E-value=7.7e-36 Score=216.92 Aligned_cols=217 Identities=20% Similarity=0.318 Sum_probs=196.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~-~ 82 (239)
+.|++|++||..+++..+.+++|. +.+.+++|+. .+.++++++.|-.+++||..+ .++++.+ +
T Consensus 127 s~d~tikv~D~~tg~~e~~LrGHt--------------~sv~di~~~a-~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~g 191 (406)
T KOG0295|consen 127 SEDATIKVFDTETGELERSLRGHT--------------DSVFDISFDA-SGKYLATCSSDLSAKLWDFDTFFRCIKSLIG 191 (406)
T ss_pred cCCceEEEEEccchhhhhhhhccc--------------cceeEEEEec-CccEEEecCCccchhheeHHHHHHHHHHhcC
Confidence 568999999999999999999999 8899999999 799999999999999999986 3445544 7
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
|...|.+++|-|.|.++++++ |.+|+.|++. ++..+.++.+|..-|..++.+.||..+++++.|.++++|-+. .++.
T Consensus 192 h~h~vS~V~f~P~gd~ilS~srD~tik~We~~-tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k 270 (406)
T KOG0295|consen 192 HEHGVSSVFFLPLGDHILSCSRDNTIKAWECD-TGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK 270 (406)
T ss_pred cccceeeEEEEecCCeeeecccccceeEEecc-cceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh
Confidence 999999999999999999999 8999999999 899999999999999999999999999999999999999887 4222
Q ss_pred eee-------------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE
Q psy11036 161 SSF-------------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203 (239)
Q Consensus 161 ~~~-------------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 203 (239)
..+ +-+..|++||+.+ +.++.++.+|...|..++|+|.|+||
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~t-g~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVST-GMCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccC-CeEEEEEecccceeeeeEEcCCCeEE
Confidence 211 1234499999988 79999999999999999999999999
Q ss_pred EEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 204 ISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 204 ~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
+++.+|+++++||+++++++.+++ |+.-+++++|+
T Consensus 350 ~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh 385 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFH 385 (406)
T ss_pred EEEecCCcEEEEEeccceeeeccCCCcceeEEEecC
Confidence 999999999999999999999998 88899999885
No 9
>KOG0279|consensus
Probab=100.00 E-value=3.7e-35 Score=206.64 Aligned_cols=185 Identities=24% Similarity=0.348 Sum_probs=160.6
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.|+.+++||+.+++..+.|.+|. ..|.+++|++ +.+.+++|+.|.++++||+... +..++ .
T Consensus 81 ~swD~~lrlWDl~~g~~t~~f~GH~--------------~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~-ck~t~~~ 144 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATGESTRRFVGHT--------------KDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGV-CKYTIHE 144 (315)
T ss_pred ccccceEEEEEecCCcEEEEEEecC--------------CceEEEEecC-CCceeecCCCcceeeeeeeccc-EEEEEec
Confidence 3578999999999999999999999 9999999999 8999999999999999998755 44444 3
Q ss_pred --CCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 83 --HGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 83 --~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
+.+.|.|++|+|+ ..++++++ |++|++||++ +.+....+.+|++.++.++++|||...++|+.||.+.+||++
T Consensus 145 ~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~-~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~- 222 (315)
T KOG0279|consen 145 DSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLR-NCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN- 222 (315)
T ss_pred CCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccC-CcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc-
Confidence 3788999999997 67888888 8999999999 888888999999999999999999999999999999999998
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++.+..+ +|...|.+++|+|+.-+|+.+ .+..|+|||++++..+..+.
T Consensus 223 -------------------~~k~lysl-~a~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~ 271 (315)
T KOG0279|consen 223 -------------------EGKNLYSL-EAFDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKAVVEELK 271 (315)
T ss_pred -------------------CCceeEec-cCCCeEeeEEecCCceeEeec-cCCceEEEeccchhhhhhcc
Confidence 33333333 568899999999987666554 55669999999998888776
No 10
>KOG0315|consensus
Probab=100.00 E-value=3.7e-34 Score=198.85 Aligned_cols=216 Identities=24% Similarity=0.337 Sum_probs=182.7
Q ss_pred CCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 7 ILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
...||+||++++. ++.+|.+|. ..|+++.|.. +++.+++|++||+++|||++...+.+.+.+.
T Consensus 60 ~qhvRlyD~~S~np~Pv~t~e~h~--------------kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~ 124 (311)
T KOG0315|consen 60 NQHVRLYDLNSNNPNPVATFEGHT--------------KNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN 124 (311)
T ss_pred CCeeEEEEccCCCCCceeEEeccC--------------CceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCC
Confidence 3689999998764 688999999 9999999999 8999999999999999999998888888999
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc-c----
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-K---- 158 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~-~---- 158 (239)
.+|+++..+|+...|+++. +|.|++||+.+..-....+.....+|.++...|||..++.+...|..++|++-. .
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~ 204 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASE 204 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcccc
Confidence 9999999999988888888 799999999833233333445567899999999999999999999999999851 1
Q ss_pred --eEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 159 --TVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 159 --~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
.+..+ +.+..+++|+..+-.+....+.+|+..+...+||.||+||+||+.|+.+++
T Consensus 205 l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rl 284 (311)
T KOG0315|consen 205 LEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARL 284 (311)
T ss_pred ceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceee
Confidence 11111 345569999988755777788999999999999999999999999999999
Q ss_pred EEccCCeeeEEec-CCCCeeeeEe
Q psy11036 215 YEMVNFSPVHTLD-YPSPVLSIDV 237 (239)
Q Consensus 215 wd~~~~~~~~~~~-~~~~v~~~~~ 237 (239)
|++..++.++.+. |..+..+++.
T Consensus 285 W~~~~~k~v~qy~gh~K~~vc~~l 308 (311)
T KOG0315|consen 285 WDLSAGKEVRQYQGHHKAAVCVAL 308 (311)
T ss_pred cccccCceeeecCCcccccEEEEe
Confidence 9999999999888 6666666664
No 11
>KOG0315|consensus
Probab=100.00 E-value=2.7e-34 Score=199.49 Aligned_cols=218 Identities=20% Similarity=0.266 Sum_probs=184.8
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--ceee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PVMS 80 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~~~ 80 (239)
+.|-|-+||+|...+|.+.++++-.. +.|..+...| ++..|++++. ..||+||++++. ++.+
T Consensus 15 sA~YDhTIRfWqa~tG~C~rTiqh~d--------------sqVNrLeiTp-dk~~LAaa~~-qhvRlyD~~S~np~Pv~t 78 (311)
T KOG0315|consen 15 SAGYDHTIRFWQALTGICSRTIQHPD--------------SQVNRLEITP-DKKDLAAAGN-QHVRLYDLNSNNPNPVAT 78 (311)
T ss_pred eccCcceeeeeehhcCeEEEEEecCc--------------cceeeEEEcC-CcchhhhccC-CeeEEEEccCCCCCceeE
Confidence 45788999999999999999999887 8999999999 7888888776 679999998775 4667
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
+ .|...|+++.|..+|+++++|+ ||+++|||++ ..... +...|..+|+++..+|+...|++|..+|.|++||+. .
T Consensus 79 ~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR-~~~~q-R~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 79 FEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLR-SLSCQ-RNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred EeccCCceEEEEEeecCeEEEecCCCceEEEEecc-Ccccc-hhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 7 6889999999999999999999 7999999999 43333 344578999999999999999999999999999997 3
Q ss_pred ceEeee-----------------------ecceeEEEEEccCC-----CEEEEEEecccCcEEEEEEccCCCeEEEEcCC
Q psy11036 158 KTVSSF-----------------------TGGLDVCIWDMLGG-----GKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 158 ~~~~~~-----------------------~~~~~i~~~d~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 209 (239)
.+...+ ...+..++|++-+. -+++..++.|++-+..+.+|||+++||++|.|
T Consensus 157 ~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd 236 (311)
T KOG0315|consen 157 SCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD 236 (311)
T ss_pred ccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence 232222 23556899998653 46778899999999999999999999999999
Q ss_pred ceEEEEEccCC-eeeEEec-CCCCeeeeEec
Q psy11036 210 HHAKIYEMVNF-SPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 210 ~~i~iwd~~~~-~~~~~~~-~~~~v~~~~~s 238 (239)
.+++||+.++. +....++ +...+...+||
T Consensus 237 ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 237 KTVKIWNTDDFFKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ceEEEEecCCceeeEEEeecCCceEEeeeec
Confidence 99999999887 4445555 77789999987
No 12
>KOG0273|consensus
Probab=100.00 E-value=9.4e-35 Score=217.57 Aligned_cols=216 Identities=19% Similarity=0.249 Sum_probs=191.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-C
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-H 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~ 83 (239)
..+|.+++|+. +|.++.+|..|+ ++|.++.|+. .+++|++++-|+++.+||..+++....+. |
T Consensus 254 ~~~G~~riw~~-~G~l~~tl~~Hk--------------gPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~ 317 (524)
T KOG0273|consen 254 SEDGEARIWNK-DGNLISTLGQHK--------------GPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFH 317 (524)
T ss_pred ecCcEEEEEec-CchhhhhhhccC--------------CceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeec
Confidence 35799999997 677889999999 9999999999 89999999999999999999999888884 6
Q ss_pred CCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~ 162 (239)
..+...+.|-.+..+..++.|+.|+++.+. ...+..++.+|.++|.++.|+|.|.+|++++.|++++||... ..+...
T Consensus 318 s~~~lDVdW~~~~~F~ts~td~~i~V~kv~-~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~ 396 (524)
T KOG0273|consen 318 SAPALDVDWQSNDEFATSSTDGCIHVCKVG-EDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHD 396 (524)
T ss_pred cCCccceEEecCceEeecCCCceEEEEEec-CCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhh
Confidence 666688999877666655569999999998 788999999999999999999999999999999999999965 332222
Q ss_pred e-------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCce
Q psy11036 163 F-------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 211 (239)
Q Consensus 163 ~-------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~ 211 (239)
+ .-+..+++||+.. +.+++.+..|..+|.+++|+|+|+++|+|+.||.
T Consensus 397 l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~-gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~ 475 (524)
T KOG0273|consen 397 LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES-GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGC 475 (524)
T ss_pred hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC-CceeEeeccCCCceEEEEecCCCcEEEecCCCCe
Confidence 2 1244499999987 8899999999999999999999999999999999
Q ss_pred EEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 212 AKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
|.||+.++++.++.+...+.|..++|+
T Consensus 476 V~iws~~~~~l~~s~~~~~~Ifel~Wn 502 (524)
T KOG0273|consen 476 VHIWSTKTGKLVKSYQGTGGIFELCWN 502 (524)
T ss_pred eEeccccchheeEeecCCCeEEEEEEc
Confidence 999999999999999999999999997
No 13
>KOG0286|consensus
Probab=100.00 E-value=1.5e-33 Score=199.79 Aligned_cols=199 Identities=20% Similarity=0.362 Sum_probs=180.1
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC--C----c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP--D----P 77 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~--~----~ 77 (239)
.+.||.+.|||.-+...++.++... ..|..++|+| .++++++|+.|....||++.+. + .
T Consensus 73 aSqDGklIvWDs~TtnK~haipl~s--------------~WVMtCA~sP-Sg~~VAcGGLdN~Csiy~ls~~d~~g~~~v 137 (343)
T KOG0286|consen 73 ASQDGKLIVWDSFTTNKVHAIPLPS--------------SWVMTCAYSP-SGNFVACGGLDNKCSIYPLSTRDAEGNVRV 137 (343)
T ss_pred eccCCeEEEEEcccccceeEEecCc--------------eeEEEEEECC-CCCeEEecCcCceeEEEeccccccccccee
Confidence 3578999999999888888888888 9999999999 8999999999999999999855 2 2
Q ss_pred eeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEc
Q psy11036 78 VMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 78 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~ 155 (239)
.+.+ +|.+-+.|+.|-+++.++...+|.+..+||++ +++.+..+.+|.+.|.+++++| +++.+++|+.|+..++||+
T Consensus 138 ~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie-~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~ 216 (343)
T KOG0286|consen 138 SRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIE-TGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDV 216 (343)
T ss_pred eeeecCccceeEEEEEcCCCceEecCCCceEEEEEcc-cceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeec
Confidence 2334 69999999999997777766669999999999 9999999999999999999999 9999999999999999999
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC---CCe
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP---SPV 232 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~v 232 (239)
+ .+.+++.+.+|+..|.+++|.|+|.-+++||+|++.|+||++..+.+..+.++ .+|
T Consensus 217 R--------------------~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gi 276 (343)
T KOG0286|consen 217 R--------------------SGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGI 276 (343)
T ss_pred c--------------------CcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCc
Confidence 9 56778888999999999999999999999999999999999999999988854 489
Q ss_pred eeeEec
Q psy11036 233 LSIDVS 238 (239)
Q Consensus 233 ~~~~~s 238 (239)
++++||
T Consensus 277 tSv~FS 282 (343)
T KOG0286|consen 277 TSVAFS 282 (343)
T ss_pred eeEEEc
Confidence 999997
No 14
>KOG0291|consensus
Probab=100.00 E-value=1.1e-32 Score=216.96 Aligned_cols=217 Identities=22% Similarity=0.415 Sum_probs=194.2
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC-CeEEEEeCCCCCceeee-cC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD-KTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~v~vw~~~~~~~~~~~-~~ 83 (239)
+.|...+|++....+++.+.-.. .+|..++|+. .|+.|+.|+.. |.+.||+..+...+... +|
T Consensus 285 ssG~f~LyelP~f~lih~LSis~--------------~~I~t~~~N~-tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH 349 (893)
T KOG0291|consen 285 SSGEFGLYELPDFNLIHSLSISD--------------QKILTVSFNS-TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH 349 (893)
T ss_pred cCCeeEEEecCCceEEEEeeccc--------------ceeeEEEecc-cCCEEEEcCCccceEEEEEeeccceeeecccc
Confidence 45788899999989998888877 8899999998 78999887754 89999999988777666 69
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
-..+++++++|||+++++|+ ||.|++||.. .+-.+.++..|...|+.+.|+..|+.+++.+.||+|+.||+. .+..+
T Consensus 350 ~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~-SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR 428 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATGAEDGKVKVWNTQ-SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR 428 (893)
T ss_pred ccceeeEEECCCCcEEEeccCCCcEEEEecc-CceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee
Confidence 99999999999999999999 7999999999 888999999999999999999999999999999999999998 77777
Q ss_pred eeec------------------------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 162 SFTG------------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 162 ~~~~------------------------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
+++. ..+|.+|++++ ++.+..+.+|+++|.+++|+|++..|+++|.|.+||+||+
T Consensus 429 Tft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 429 TFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDI 507 (893)
T ss_pred eecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec-CeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEe
Confidence 7621 33499999988 8999999999999999999999999999999999999998
Q ss_pred cC-CeeeEEecCCCCeeeeEecC
Q psy11036 218 VN-FSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 218 ~~-~~~~~~~~~~~~v~~~~~sp 239 (239)
-. .....+++....+.+++|+|
T Consensus 508 f~s~~~vEtl~i~sdvl~vsfrP 530 (893)
T KOG0291|consen 508 FSSSGTVETLEIRSDVLAVSFRP 530 (893)
T ss_pred eccCceeeeEeeccceeEEEEcC
Confidence 54 45677788888999999987
No 15
>KOG0282|consensus
Probab=100.00 E-value=7.8e-35 Score=218.52 Aligned_cols=221 Identities=19% Similarity=0.339 Sum_probs=188.9
Q ss_pred CCCCCCEEEEeeCCC-cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 3 HDLPILIVALWDIPS-EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
..|-|+.|+||++.. ++++++|.+|. .+|.+++|++ .+..+++++.|+.+++||+++|++...+
T Consensus 232 S~gmD~~vklW~vy~~~~~lrtf~gH~--------------k~Vrd~~~s~-~g~~fLS~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 232 SGGMDGLVKLWNVYDDRRCLRTFKGHR--------------KPVRDASFNN-CGTSFLSASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred ecCCCceEEEEEEecCcceehhhhcch--------------hhhhhhhccc-cCCeeeeeecceeeeeeccccceEEEEE
Confidence 457899999999876 89999999999 9999999999 8999999999999999999999999999
Q ss_pred cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 82 NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
.....++|+.|+|++ +.+++|+ |+.|+.||++ .++.++++..|-+.|..+.|-++|+.+++.+.|++++||+.+ .-
T Consensus 297 ~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR-s~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 297 HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR-SGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred ecCCCceeeecCCCCCcEEEEecCCCcEEEEecc-chHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCc
Confidence 888999999999988 6666776 8999999999 888999999999999999999999999999999999999987 22
Q ss_pred eEeee-----------------------ecceeEEEEEccCC--CEEEEEEecccC--cEEEEEEccCCCeEEEEcCCce
Q psy11036 159 TVSSF-----------------------TGGLDVCIWDMLGG--GKLLHKFTCHHK--TVTSLCLASGGKRLISASLDHH 211 (239)
Q Consensus 159 ~~~~~-----------------------~~~~~i~~~d~~~~--~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~ 211 (239)
.+... +-+..+.++.+... ......+++|.. --..+.|||||++|++|+.||.
T Consensus 376 ~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~ 455 (503)
T KOG0282|consen 376 PIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGK 455 (503)
T ss_pred cchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCcc
Confidence 21111 12334666664432 223344666654 3467899999999999999999
Q ss_pred EEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 212 AKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 212 i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.+||.++-+.+..++ |.+++..+.|+|
T Consensus 456 v~~wdwkt~kl~~~lkah~~~ci~v~wHP 484 (503)
T KOG0282|consen 456 VNFWDWKTTKLVSKLKAHDQPCIGVDWHP 484 (503)
T ss_pred EEEeechhhhhhhccccCCcceEEEEecC
Confidence 9999999999999998 779999999998
No 16
>KOG0285|consensus
Probab=100.00 E-value=6.6e-33 Score=201.66 Aligned_cols=208 Identities=20% Similarity=0.330 Sum_probs=186.5
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
|.+.+.|++|.|||+.+|++..++.+|. ..|..+++++ -..++++++.|+.|+.||++..+.++.
T Consensus 166 f~tgs~DrtikIwDlatg~LkltltGhi--------------~~vr~vavS~-rHpYlFs~gedk~VKCwDLe~nkvIR~ 230 (460)
T KOG0285|consen 166 FATGSADRTIKIWDLATGQLKLTLTGHI--------------ETVRGVAVSK-RHPYLFSAGEDKQVKCWDLEYNKVIRH 230 (460)
T ss_pred EEecCCCceeEEEEcccCeEEEeecchh--------------heeeeeeecc-cCceEEEecCCCeeEEEechhhhhHHH
Confidence 5677899999999999999999999999 9999999999 788999999999999999999999888
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
+ +|-..|.|++.+|.-..+++++ |..+++||++ +...+..+.+|..+|..+.+.|....+++|+.|++|++||++ +
T Consensus 231 YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR-tr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ag 309 (460)
T KOG0285|consen 231 YHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR-TRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAG 309 (460)
T ss_pred hccccceeEEEeccccceeEEecCCcceEEEeeec-ccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccC
Confidence 7 8999999999999999999999 8999999999 889999999999999999999988899999999999999999 6
Q ss_pred ceEeee---------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 158 KTVSSF---------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 158 ~~~~~~---------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
+...++ .+..+++-|++.. +..+..+.+|..-|.+++...|+ ++++|++.|.+.+||
T Consensus 310 kt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~-g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwd 387 (460)
T KOG0285|consen 310 KTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPE-GEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWD 387 (460)
T ss_pred ceeEeeecccceeeEEecCCchhhhhccCCccceeccCCc-cchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEe
Confidence 665554 2344588899876 66677789999999999987664 788999999999999
Q ss_pred ccCCeeeEEe
Q psy11036 217 MVNFSPVHTL 226 (239)
Q Consensus 217 ~~~~~~~~~~ 226 (239)
.++|-..+..
T Consensus 388 wksg~nyQ~~ 397 (460)
T KOG0285|consen 388 WKSGHNYQRG 397 (460)
T ss_pred cCcCcccccc
Confidence 9988665554
No 17
>KOG0285|consensus
Probab=100.00 E-value=3.3e-33 Score=203.27 Aligned_cols=185 Identities=18% Similarity=0.306 Sum_probs=171.7
Q ss_pred ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCc
Q psy11036 19 AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGG 97 (239)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 97 (239)
+..+.+.+|. +.|.|+++.| .++.+++|+.|++++|||+.+++...++ +|...|..+++++...
T Consensus 142 Kl~rVi~gHl--------------gWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHp 206 (460)
T KOG0285|consen 142 KLYRVISGHL--------------GWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHP 206 (460)
T ss_pred eehhhhhhcc--------------ceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCc
Confidence 3445667777 9999999999 8999999999999999999999999988 6999999999999999
Q ss_pred EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccC
Q psy11036 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176 (239)
Q Consensus 98 ~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~ 176 (239)
++++++ |+.|+.||++ ..+.++...+|-..|.+++.+|.-+.|++|+.|.++++||++
T Consensus 207 YlFs~gedk~VKCwDLe-~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR-------------------- 265 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLE-YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR-------------------- 265 (460)
T ss_pred eEEEecCCCeeEEEech-hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeec--------------------
Confidence 999999 7999999999 888899999999999999999999999999999999999999
Q ss_pred CCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 177 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
....+..+.+|..+|..+.+.|-...+++||.|++|++||+..|+...++. |...+.+++.+|
T Consensus 266 tr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP 329 (460)
T KOG0285|consen 266 TRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHP 329 (460)
T ss_pred ccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCC
Confidence 577788889999999999999988889999999999999999999998887 777999999887
No 18
>KOG0265|consensus
Probab=100.00 E-value=8.4e-33 Score=196.63 Aligned_cols=204 Identities=20% Similarity=0.323 Sum_probs=182.4
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.|.|.+|+.||+++|+.++.+++|. +-|.++.-+..+..++.+++.|+++++||+++...++++..
T Consensus 108 ~gtDk~v~~wD~~tG~~~rk~k~h~--------------~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ 173 (338)
T KOG0265|consen 108 CGTDKTVRGWDAETGKRIRKHKGHT--------------SFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN 173 (338)
T ss_pred ecCCceEEEEecccceeeehhcccc--------------ceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc
Confidence 4789999999999999999999999 88999987766677889999999999999999999999988
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
+.+++++.|..++..+.+|+ |+.|++||++ .....+.+.+|..+|+.+..+|+|.++.+-+.|.++++||++ ...
T Consensus 174 kyqltAv~f~d~s~qv~sggIdn~ikvWd~r-~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p-- 250 (338)
T KOG0265|consen 174 KYQLTAVGFKDTSDQVISGGIDNDIKVWDLR-KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAP-- 250 (338)
T ss_pred ceeEEEEEecccccceeeccccCceeeeccc-cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCC--
Confidence 99999999999999999999 9999999999 888999999999999999999999999999999999999998 111
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccC----cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeE
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHK----TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSID 236 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~ 236 (239)
...++..+.+|.. .....+|+|+++.+..|+.|..+++||......+..++ |.+.|++++
T Consensus 251 ---------------~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~ 315 (338)
T KOG0265|consen 251 ---------------SQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVD 315 (338)
T ss_pred ---------------CCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEee
Confidence 2334555555443 34567899999999999999999999999989999998 889999999
Q ss_pred ecC
Q psy11036 237 VSM 239 (239)
Q Consensus 237 ~sp 239 (239)
|+|
T Consensus 316 Fhp 318 (338)
T KOG0265|consen 316 FHP 318 (338)
T ss_pred ecC
Confidence 998
No 19
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=3.1e-31 Score=211.27 Aligned_cols=196 Identities=19% Similarity=0.265 Sum_probs=160.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------ceeee-cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-------PVMSV-NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~-~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~ 112 (239)
+.|.+++|+|.++++|++|+.|++|++||+.++. ++..+ +|...|.+++|+|++ .+|++++ |+.|++||+
T Consensus 76 ~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl 155 (493)
T PTZ00421 76 GPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDV 155 (493)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEEC
Confidence 9999999999667899999999999999997652 34455 689999999999975 6888877 899999999
Q ss_pred cCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee----------------------ec----
Q psy11036 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF----------------------TG---- 165 (239)
Q Consensus 113 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------~~---- 165 (239)
+ .++.+..+..|...|.+++|+|+|.+|++++.|+.|++||++ ++.+..+ .|
T Consensus 156 ~-tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s 234 (493)
T PTZ00421 156 E-RGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS 234 (493)
T ss_pred C-CCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCC
Confidence 8 778888899999999999999999999999999999999998 5444332 11
Q ss_pred -ceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEc-CCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 166 -GLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISAS-LDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 166 -~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
++.+++||+++...++.....+. ..+....|++++++|++++ .|+.|++||+.+++++.... ...++..++|.|
T Consensus 235 ~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~p 313 (493)
T PTZ00421 235 QQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMP 313 (493)
T ss_pred CCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecc
Confidence 34699999987666665544333 4556667899999998887 59999999999999877665 455788888876
No 20
>KOG0286|consensus
Probab=100.00 E-value=3.3e-32 Score=193.09 Aligned_cols=178 Identities=25% Similarity=0.426 Sum_probs=163.1
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.|.+..+||+++++.+..|.+|. +.|.++.++|.+++.+++|+-|+..++||++.+.++++| +
T Consensus 162 ~SGD~TCalWDie~g~~~~~f~GH~--------------gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g 227 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVFHGHT--------------GDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG 227 (343)
T ss_pred cCCCceEEEEEcccceEEEEecCCc--------------ccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc
Confidence 4568999999999999999999999 999999999988999999999999999999999999999 7
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
|+..|++++|.|+|.-+++|+ |++.++||++ ..+.+..+.. -..+|++++|+..|++|.+|..|.++.+||.-
T Consensus 228 hesDINsv~ffP~G~afatGSDD~tcRlyDlR-aD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtl--- 303 (343)
T KOG0286|consen 228 HESDINSVRFFPSGDAFATGSDDATCRLYDLR-ADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTL--- 303 (343)
T ss_pred cccccceEEEccCCCeeeecCCCceeEEEeec-CCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecc---
Confidence 999999999999999999999 6999999999 5555555542 34589999999999999999999999999976
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.++.+..+.+|...|+++..+|||.-++|||.|..+|||.
T Consensus 304 -----------------k~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 304 -----------------KGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred -----------------ccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 5677777899999999999999999999999999999994
No 21
>KOG0284|consensus
Probab=100.00 E-value=2.9e-34 Score=211.58 Aligned_cols=199 Identities=23% Similarity=0.323 Sum_probs=177.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
..+|.|++|+.. ...++.+.+|.. ..|++++|+| +...+++++.||+|+|||....++...+ +|
T Consensus 157 D~gG~iKyWqpn-mnnVk~~~ahh~-------------eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GH 221 (464)
T KOG0284|consen 157 DKGGMIKYWQPN-MNNVKIIQAHHA-------------EAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGH 221 (464)
T ss_pred CCCceEEecccc-hhhhHHhhHhhh-------------hhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccC
Confidence 357999999974 444555655431 7899999999 8889999999999999999988888777 79
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
.-.|.++.|+|....+++++ |..|++||.+ ++..+.++..|...|..+.|+|++++|++++.|..++++|++
T Consensus 222 gwdVksvdWHP~kgLiasgskDnlVKlWDpr-Sg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR------ 294 (464)
T KOG0284|consen 222 GWDVKSVDWHPTKGLIASGSKDNLVKLWDPR-SGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR------ 294 (464)
T ss_pred CCCcceeccCCccceeEEccCCceeEeecCC-CcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh------
Confidence 99999999999999999999 7999999999 899999999999999999999999999999999999999998
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
..+.+..+++|...|+++.|+| ...+|.+|+.||.|..|.+...+++..+. |...|++++|+|
T Consensus 295 --------------~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hP 360 (464)
T KOG0284|consen 295 --------------TMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHP 360 (464)
T ss_pred --------------HhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccc
Confidence 3444555689999999999999 56788899999999999999888888887 888999999998
No 22
>KOG0266|consensus
Probab=100.00 E-value=6e-32 Score=215.59 Aligned_cols=217 Identities=24% Similarity=0.411 Sum_probs=187.6
Q ss_pred CCCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeC-CCCCceeee-
Q psy11036 6 PILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDT-RSPDPVMSV- 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~-~~~~~~~~~- 81 (239)
.++.+++|+..+.+ ..+.+.+|. ..|.+++|+| ++.++++++.|+++++||+ ..+..++++
T Consensus 179 ~~~~i~~~~~~~~~~~~~~~l~~h~--------------~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~~~~~~l~ 243 (456)
T KOG0266|consen 179 SDGLIRIWKLEGIKSNLLRELSGHT--------------RGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDGRNLKTLK 243 (456)
T ss_pred CCCcEEEeecccccchhhccccccc--------------cceeeeEECC-CCcEEEEecCCceEEEeeccCCCeEEEEec
Confidence 57999999998777 777888888 9999999999 8999999999999999999 445777777
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc-
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK- 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~- 158 (239)
+|...|++++|+|+++.+++|+ |++|++||++ .++....+.+|.+.|++++|++++++|++++.|+.|++||+. +.
T Consensus 244 gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~-~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 244 GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR-TGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred CCCCceEEEEecCCCCEEEEecCCCcEEEEecc-CCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCce
Confidence 7999999999999999999998 8999999999 799999999999999999999999999999999999999999 44
Q ss_pred -eEeee------------------------ecceeEEEEEccCCCEEEEEEecccCc---EEEEEEccCCCeEEEEcCCc
Q psy11036 159 -TVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKT---VTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 159 -~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~---v~~~~~s~~~~~l~s~s~d~ 210 (239)
++..+ ..+..+++||+.. ......+.+|... +.+...++.+.++++|+.|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~ 401 (456)
T KOG0266|consen 323 LCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRS-GKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDG 401 (456)
T ss_pred eeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccC-CcceeeecccCCcceeEecccccCCCCeEEEEeCCc
Confidence 22222 2344699999987 6667777777764 44445677899999999999
Q ss_pred eEEEEEccCCeeeEEec-C-CCCeeeeEecC
Q psy11036 211 HAKIYEMVNFSPVHTLD-Y-PSPVLSIDVSM 239 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~-~-~~~v~~~~~sp 239 (239)
.|++|++.++..+..+. | ...+..++|+|
T Consensus 402 ~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~ 432 (456)
T KOG0266|consen 402 SVYVWDSSSGGILQRLEGHSKAAVSDLSSHP 432 (456)
T ss_pred eEEEEeCCccchhhhhcCCCCCceeccccCC
Confidence 99999999999998888 5 57888888875
No 23
>KOG0284|consensus
Probab=100.00 E-value=2.8e-34 Score=211.64 Aligned_cols=197 Identities=20% Similarity=0.252 Sum_probs=174.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c-C
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N-H 83 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~-~ 83 (239)
..|.+.+|+..+......+++|. .+|+++.|++ ++.++++|+.+|.|++|+..... +..+ . |
T Consensus 116 ~SGEFtLWNg~~fnFEtilQaHD--------------s~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpnmnn-Vk~~~ahh 179 (464)
T KOG0284|consen 116 QSGEFTLWNGTSFNFETILQAHD--------------SPVRTMKWSH-NGTWMISGDKGGMIKYWQPNMNN-VKIIQAHH 179 (464)
T ss_pred ccccEEEecCceeeHHHHhhhhc--------------ccceeEEEcc-CCCEEEEcCCCceEEecccchhh-hHHhhHhh
Confidence 34889999975554445567888 9999999999 89999999999999999986443 3333 3 5
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
...|++++|+|+...+++++ ||+|+|||.. ..+....+.+|.-.|.++.|+|....+++++.|+.|++||.+
T Consensus 180 ~eaIRdlafSpnDskF~t~SdDg~ikiWdf~-~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDpr------ 252 (464)
T KOG0284|consen 180 AEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR-MPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPR------ 252 (464)
T ss_pred hhhhheeccCCCCceeEEecCCCeEEEEecc-CCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCC------
Confidence 59999999999999999998 7999999998 666667779999999999999999999999999999999998
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.++++.++.+|...|..+.|+|++++|+|+|.|..+++||+++.+.+++++ |...|+++.|+|
T Consensus 253 --------------Sg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP 316 (464)
T KOG0284|consen 253 --------------SGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP 316 (464)
T ss_pred --------------CcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence 577777789999999999999999999999999999999999999999998 999999999998
No 24
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=1.4e-30 Score=208.85 Aligned_cols=220 Identities=21% Similarity=0.230 Sum_probs=170.8
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD------- 76 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~------- 76 (239)
.|.++.|++|+......+..+.+|. +.|.+++|+|.++++|++|+.|++|++||+.++.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~--------------~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~ 115 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHT--------------SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIK 115 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCC--------------CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccc
Confidence 3567889999987777888899998 9999999999558899999999999999997642
Q ss_pred -ceeee-cCCCCEEEEEEecCCcEE-EEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 77 -PVMSV-NHGSPVESVLCLPSGGIF-VTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 77 -~~~~~-~~~~~v~~~~~~~~~~~l-~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
++..+ .|...|.+++|+|++..+ ++++ |+.|++||++ .++....+. |...|.+++|+|+|.+|++++.|+.|+|
T Consensus 116 ~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~-tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrI 193 (568)
T PTZ00420 116 DPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIE-NEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHI 193 (568)
T ss_pred cceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECC-CCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEE
Confidence 22344 688999999999988765 5666 8999999998 666666665 6678999999999999999999999999
Q ss_pred EEcc-cceEeee-------------------------e-cc-----eeEEEEEccCCCEEEEEEec--ccCcEEEEEEcc
Q psy11036 153 YEMT-LKTVSSF-------------------------T-GG-----LDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLAS 198 (239)
Q Consensus 153 ~d~~-~~~~~~~-------------------------~-~~-----~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~ 198 (239)
||++ ++.+.++ + |. ..+++||++....++..+.. +.+.+......+
T Consensus 194 wD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~ 273 (568)
T PTZ00420 194 IDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDES 273 (568)
T ss_pred EECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCC
Confidence 9998 4433322 1 11 24999999976666655433 333333344455
Q ss_pred CCCeEEEEcCCceEEEEEccCCee--eEEecCCCCeeeeEecC
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSP--VHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp 239 (239)
+|.++++|+.|+.|++|++..+.. +..+.+..+..+++|.|
T Consensus 274 tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~P 316 (568)
T PTZ00420 274 TGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLP 316 (568)
T ss_pred CCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEcc
Confidence 689999999999999999977642 33344667889999987
No 25
>KOG0276|consensus
Probab=100.00 E-value=2.3e-32 Score=211.36 Aligned_cols=215 Identities=20% Similarity=0.313 Sum_probs=193.4
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~ 85 (239)
.|.|.|||.++...++.+.... -+|++..|-+ ..+.+++|+.|..|+||+..+++.+..+ .|..
T Consensus 34 nG~V~IWnyetqtmVksfeV~~--------------~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~FeAH~D 98 (794)
T KOG0276|consen 34 NGDVQIWNYETQTMVKSFEVSE--------------VPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSD 98 (794)
T ss_pred cCeeEEEecccceeeeeeeecc--------------cchhhheeee-ccceEEEecCCceEEEEecccceeeEEeecccc
Confidence 5999999999999999999988 9999999999 7999999999999999999999999999 6999
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-cceEee
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT-LKTVSS 162 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~ 162 (239)
-|.+++.+|...++++++ |-.|++||.+..-...+++.+|..-|++++|+| |.+.+++++-|++|++|.+. ..+..+
T Consensus 99 yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfT 178 (794)
T KOG0276|consen 99 YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFT 178 (794)
T ss_pred ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCcee
Confidence 999999999999999999 589999999977788899999999999999999 55799999999999999997 554444
Q ss_pred e----------------------ec--ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 163 F----------------------TG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 163 ~----------------------~~--~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+ +| +..+++||.++ ..++.++.+|.+.|..+.|+|.=.+++|||.||++|||.-.
T Consensus 179 l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt-k~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~ 257 (794)
T KOG0276|consen 179 LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT-KSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSK 257 (794)
T ss_pred eeccccCcceEEeccCCCcceEEecCCCceEEEeecch-HHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCc
Confidence 4 22 23399999987 88999999999999999999999999999999999999999
Q ss_pred CCeeeEEec-CCCCeeeeEe
Q psy11036 219 NFSPVHTLD-YPSPVLSIDV 237 (239)
Q Consensus 219 ~~~~~~~~~-~~~~v~~~~~ 237 (239)
+.+...++. .-..+++++-
T Consensus 258 Ty~lE~tLn~gleRvW~I~~ 277 (794)
T KOG0276|consen 258 TYKLEKTLNYGLERVWCIAA 277 (794)
T ss_pred ceehhhhhhcCCceEEEEee
Confidence 988888877 4456777663
No 26
>KOG0310|consensus
Probab=100.00 E-value=6.6e-32 Score=203.05 Aligned_cols=216 Identities=29% Similarity=0.484 Sum_probs=187.3
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSP 86 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~ 86 (239)
-.+.||+..+....+++...+ ..+.++.|.. +|.+|++|...|.|+++|+.+...++.+ .|..+
T Consensus 48 ~rvqly~~~~~~~~k~~srFk--------------~~v~s~~fR~-DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~ap 112 (487)
T KOG0310|consen 48 VRVQLYSSVTRSVRKTFSRFK--------------DVVYSVDFRS-DGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAP 112 (487)
T ss_pred cEEEEEecchhhhhhhHHhhc--------------cceeEEEeec-CCeEEEccCCcCcEEEeccccHHHHHHHhhccCc
Confidence 567888887777777776666 8899999999 8999999999999999997665555566 69999
Q ss_pred EEEEEEecCCcE-EEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEEcc--cceEe
Q psy11036 87 VESVLCLPSGGI-FVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMT--LKTVS 161 (239)
Q Consensus 87 v~~~~~~~~~~~-l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d~~--~~~~~ 161 (239)
+..+.|+|++.. +++|+ |+.+++||+. +......+.+|...|.+.+|+|. +..+++|+.||.|++||++ +..+.
T Consensus 113 v~~~~f~~~d~t~l~s~sDd~v~k~~d~s-~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~ 191 (487)
T KOG0310|consen 113 VHVTKFSPQDNTMLVSGSDDKVVKYWDLS-TAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVV 191 (487)
T ss_pred eeEEEecccCCeEEEecCCCceEEEEEcC-CcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeE
Confidence 999999996655 55555 4788999998 55556688999999999999995 4588999999999999999 35555
Q ss_pred ee--------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 162 SF--------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 162 ~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
++ .|+..+++||+.++++.+..+..|...|+|+++..++..|++++-|+.|++||+.+.+
T Consensus 192 elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~K 271 (487)
T KOG0310|consen 192 ELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYK 271 (487)
T ss_pred EecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceE
Confidence 54 4677899999999899998888899999999999999999999999999999999999
Q ss_pred eeEEecCCCCeeeeEecC
Q psy11036 222 PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 222 ~~~~~~~~~~v~~~~~sp 239 (239)
.+..+..+++|.+++.+|
T Consensus 272 vv~s~~~~~pvLsiavs~ 289 (487)
T KOG0310|consen 272 VVHSWKYPGPVLSIAVSP 289 (487)
T ss_pred EEEeeecccceeeEEecC
Confidence 999999999999999987
No 27
>KOG0292|consensus
Probab=100.00 E-value=3.9e-32 Score=217.40 Aligned_cols=217 Identities=18% Similarity=0.297 Sum_probs=193.4
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~ 85 (239)
.|.|++||.+-+.++..|..|. ++|+.++|+| .+.++++|+.|-.|+||+..+.+++.++ +|-.
T Consensus 30 sG~IQlWDYRM~tli~rFdeHd--------------GpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclftL~GHlD 94 (1202)
T KOG0292|consen 30 SGVIQLWDYRMGTLIDRFDEHD--------------GPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLD 94 (1202)
T ss_pred CceeeeehhhhhhHHhhhhccC--------------CccceeeecC-CCCeEEecCCccEEEEEecccceehhhhccccc
Confidence 5899999999999999999999 9999999999 7999999999999999999999999888 8999
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee--
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS-- 162 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-- 162 (239)
-|..+.|++.-.++++++ |.+|+||+.. +++.+..+.+|..-|.|..|+|....++++|-|.+|++||+.+-.-..
T Consensus 95 YVRt~~FHheyPWIlSASDDQTIrIWNwq-sr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~ 173 (1202)
T KOG0292|consen 95 YVRTVFFHHEYPWILSASDDQTIRIWNWQ-SRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKA 173 (1202)
T ss_pred eeEEeeccCCCceEEEccCCCeEEEEecc-CCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCC
Confidence 999999999999999999 6999999999 899999999999999999999999999999999999999986110000
Q ss_pred ----------------e--------------------------------e--cceeEEEEEccCC-CEEEEEEecccCcE
Q psy11036 163 ----------------F--------------------------------T--GGLDVCIWDMLGG-GKLLHKFTCHHKTV 191 (239)
Q Consensus 163 ----------------~--------------------------------~--~~~~i~~~d~~~~-~~~~~~~~~h~~~v 191 (239)
+ + .+.+|++|-+... .-.+.+..+|.+.|
T Consensus 174 pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnV 253 (1202)
T KOG0292|consen 174 PGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNV 253 (1202)
T ss_pred CCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCc
Confidence 0 1 2445899988654 34567789999999
Q ss_pred EEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 192 TSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+++-|+|...++++.|.|++|+|||+...+.++++. ..+..+.++-+|
T Consensus 254 ssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP 302 (1202)
T KOG0292|consen 254 SSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHP 302 (1202)
T ss_pred ceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecC
Confidence 999999999999999999999999999999999997 556788887776
No 28
>KOG0296|consensus
Probab=100.00 E-value=1.1e-30 Score=190.20 Aligned_cols=218 Identities=17% Similarity=0.247 Sum_probs=192.2
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+-|.|..-+||++.++.....+.+|+ +.|+++.|+. ++.+|++|..+|.|+||...++.....+
T Consensus 81 TGGgDD~AflW~~~~ge~~~eltgHK--------------DSVt~~~Fsh-dgtlLATGdmsG~v~v~~~stg~~~~~~~ 145 (399)
T KOG0296|consen 81 TGGGDDLAFLWDISTGEFAGELTGHK--------------DSVTCCSFSH-DGTLLATGDMSGKVLVFKVSTGGEQWKLD 145 (399)
T ss_pred ecCCCceEEEEEccCCcceeEecCCC--------------CceEEEEEcc-CceEEEecCCCccEEEEEcccCceEEEee
Confidence 34678899999999999999999999 9999999999 8999999999999999999999988887
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
..-..+.-+.|+|.+..|++|+ ||.+-+|.+. .+...+.+.+|+.++++=.|.|+|+.++++..||+|++|+.. ++.
T Consensus 146 ~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip-~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p 224 (399)
T KOG0296|consen 146 QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP-SQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQP 224 (399)
T ss_pred cccCceEEEEecccccEEEeecCCCcEEEEECC-CcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCce
Confidence 4667899999999999999999 8999999998 557788899999999999999999999999999999999998 665
Q ss_pred Eeee--------------------------------------------------------------------------ec
Q psy11036 160 VSSF--------------------------------------------------------------------------TG 165 (239)
Q Consensus 160 ~~~~--------------------------------------------------------------------------~~ 165 (239)
+..+ +|
T Consensus 225 ~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G 304 (399)
T KOG0296|consen 225 LHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACG 304 (399)
T ss_pred eEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcc
Confidence 5544 11
Q ss_pred --ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 166 --GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 166 --~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++.|.+||... ..++..-.|..+|..+.|-+ ..+|++++.+|.|+.||.++|+++.++. |..+|.+++.+|
T Consensus 305 ~vdG~i~iyD~a~--~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~ 378 (399)
T KOG0296|consen 305 SVDGTIAIYDLAA--STLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSP 378 (399)
T ss_pred cccceEEEEeccc--chhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcC
Confidence 34488888754 23333345888999999998 7899999999999999999999999998 888999999886
No 29
>KOG0316|consensus
Probab=100.00 E-value=1.5e-31 Score=184.64 Aligned_cols=219 Identities=20% Similarity=0.268 Sum_probs=187.7
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.|+|.+|++||...+.+++++.+|. ..|..++.+. ++..+++|+.|..+.+||+.+|+..+.+
T Consensus 34 tcGsdrtvrLWNp~rg~liktYsghG--------------~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGkv~Rr~r 98 (307)
T KOG0316|consen 34 TCGSDRTVRLWNPLRGALIKTYSGHG--------------HEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGKVDRRFR 98 (307)
T ss_pred EcCCCceEEeecccccceeeeecCCC--------------ceeeeccccc-cccccccCCCCceEEEEEcccCeeeeecc
Confidence 46899999999999999999999998 8999999998 7889999999999999999999999999
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC-CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG-GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~-~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
+|.+.|+.++|+.+...+++|+ |..+++||-+. ..++++.+......|.++..+ +..|++|+.||+++.||++ ++
T Consensus 99 gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~ 176 (307)
T KOG0316|consen 99 GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGT 176 (307)
T ss_pred cccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecce
Confidence 7999999999999999999999 99999999984 356788888888899998884 6789999999999999998 55
Q ss_pred eEeeee--------------------cceeEEEEEccCCCEEEEEEecccCcEE--EEEEccCCCeEEEEcCCceEEEEE
Q psy11036 159 TVSSFT--------------------GGLDVCIWDMLGGGKLLHKFTCHHKTVT--SLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 159 ~~~~~~--------------------~~~~i~~~d~~~~~~~~~~~~~h~~~v~--~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
....+. -+..+++.|-.+ ++.+..+++|...-. ..+++.....+++||+||.|++||
T Consensus 177 l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~t-GklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wd 255 (307)
T KOG0316|consen 177 LSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKET-GKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWD 255 (307)
T ss_pred eehhhcCCcceeEEecCCCCEEEEeeccceeeecccch-hHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEE
Confidence 433331 133477888655 788888999987544 446677778999999999999999
Q ss_pred ccCCeeeEEecCCC-C-eeeeEecC
Q psy11036 217 MVNFSPVHTLDYPS-P-VLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~~~~-~-v~~~~~sp 239 (239)
+.....+..+.+.+ . +.+++++|
T Consensus 256 Lvd~~~~sk~~~~~~v~v~dl~~hp 280 (307)
T KOG0316|consen 256 LVDETQISKLSVVSTVIVTDLSCHP 280 (307)
T ss_pred eccceeeeeeccCCceeEEeeeccc
Confidence 99999999999555 4 68888887
No 30
>KOG0645|consensus
Probab=100.00 E-value=1.1e-30 Score=183.48 Aligned_cols=188 Identities=23% Similarity=0.296 Sum_probs=163.1
Q ss_pred eeeeeeCCceeeccceeeccCCCCCeEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCC---ceeee--cCCCCEEEEEEe
Q psy11036 20 QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS-SDIVISGSYDKTVNVYDTRSPD---PVMSV--NHGSPVESVLCL 93 (239)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~v~vw~~~~~~---~~~~~--~~~~~v~~~~~~ 93 (239)
.++.+++|. +.+..++|+| . |.+|++++.|+.|++|+...+. +...+ .|+..|..++|+
T Consensus 6 ~~~~~~gh~--------------~r~W~~awhp-~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAws 70 (312)
T KOG0645|consen 6 LEQKLSGHK--------------DRVWSVAWHP-GKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWS 70 (312)
T ss_pred eEEeecCCC--------------CcEEEEEecc-CCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeec
Confidence 456777887 9999999999 5 7899999999999999998533 33334 499999999999
Q ss_pred cCCcEEEEeC-CCcEEEEEcc-CCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEE
Q psy11036 94 PSGGIFVTGG-GLDVCIWDML-GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171 (239)
Q Consensus 94 ~~~~~l~~~~-~~~i~~~d~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~ 171 (239)
|.|++|++++ |.++.||.-. ...+.+..+.+|...|.+++|+++|++||+++.|..|-||.+..
T Consensus 71 p~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de-------------- 136 (312)
T KOG0645|consen 71 PHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE-------------- 136 (312)
T ss_pred CCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC--------------
Confidence 9999999999 9999999754 23578889999999999999999999999999999999998871
Q ss_pred EEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc---CCeeeEEec-CCCCeeeeEecC
Q psy11036 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV---NFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 172 ~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~-~~~~v~~~~~sp 239 (239)
....++...+++|.+.|..+.|+|...+|+++|.|.+|++|+-. ..++++++. +...|.+++|+|
T Consensus 137 ---ddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~ 205 (312)
T KOG0645|consen 137 ---DDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN 205 (312)
T ss_pred ---CCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecC
Confidence 11356778889999999999999999999999999999999876 467889998 777999999986
No 31
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.1e-29 Score=191.29 Aligned_cols=218 Identities=27% Similarity=0.393 Sum_probs=189.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.+|.|++|++.+++....+..|. ..+..+.|+| +++++++++.||.+++|++.+++....+ .+
T Consensus 28 ~~~g~i~i~~~~~~~~~~~~~~~~--------------~~i~~~~~~~-~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~ 92 (289)
T cd00200 28 SGDGTIKVWDLETGELLRTLKGHT--------------GPVRDVAASA-DGTYLASGSSDKTIRLWDLETGECVRTLTGH 92 (289)
T ss_pred ecCcEEEEEEeeCCCcEEEEecCC--------------cceeEEEECC-CCCEEEEEcCCCeEEEEEcCcccceEEEecc
Confidence 358999999999988888888888 8899999999 6789999999999999999987777766 57
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
...+.++.|+|++.++++++ ++.+.+||++ ..+....+..|...+.+++|+|++.++++++.|+.+++||++ .+.+.
T Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~ 171 (289)
T cd00200 93 TSYVSSVAFSPDGRILSSSSRDKTIKVWDVE-TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA 171 (289)
T ss_pred CCcEEEEEEcCCCCEEEEecCCCeEEEEECC-CcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccce
Confidence 77999999999999999998 8999999998 678888888899999999999998888888889999999997 44333
Q ss_pred ee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 162 SF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 162 ~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.+ ..++.+.+||++. .+.+..+..|...+.++.|+|++.++++++.|+.|++||+.+
T Consensus 172 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~ 250 (289)
T cd00200 172 TLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST-GKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT 250 (289)
T ss_pred eEecCccccceEEECCCcCEEEEecCCCcEEEEECCC-CceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC
Confidence 32 2245699999876 566777778888999999999999999988899999999999
Q ss_pred CeeeEEec-CCCCeeeeEecC
Q psy11036 220 FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 220 ~~~~~~~~-~~~~v~~~~~sp 239 (239)
++++..+. +...+.+++|+|
T Consensus 251 ~~~~~~~~~~~~~i~~~~~~~ 271 (289)
T cd00200 251 GECVQTLSGHTNSVTSLAWSP 271 (289)
T ss_pred ceeEEEccccCCcEEEEEECC
Confidence 99988887 677999999986
No 32
>KOG0319|consensus
Probab=100.00 E-value=1.7e-31 Score=209.77 Aligned_cols=203 Identities=25% Similarity=0.322 Sum_probs=181.1
Q ss_pred CCCCCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 2 SHDLPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
.+.++|.++++|.++++ .++....+|. ..|.+++++.....+|+++|.|+++++|++...++
T Consensus 381 at~sKD~svilWr~~~~~~~~~~~a~~~gH~--------------~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~ 446 (775)
T KOG0319|consen 381 ATGSKDKSVILWRLNNNCSKSLCVAQANGHT--------------NSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKE 446 (775)
T ss_pred EEecCCceEEEEEecCCcchhhhhhhhcccc--------------cccceeeecccCccEEEEecCCceEEEecCCCccc
Confidence 35678999999977443 3455667888 99999999986678999999999999999976221
Q ss_pred -----ee----e-ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 78 -----VM----S-VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 78 -----~~----~-~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
.. + ..|...|++++.+|+.+++++|+ |.+.++|+++ .......+.+|...|.++.|+|..+.+++++.
T Consensus 447 ~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le-~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~Sg 525 (775)
T KOG0319|consen 447 TAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE-QLRLLGVLSGHTRGVWCVSFSKNDQLLATCSG 525 (775)
T ss_pred ccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeeccc-CceEEEEeeCCccceEEEEeccccceeEeccC
Confidence 11 1 13889999999999999999999 8999999999 89999999999999999999999999999999
Q ss_pred CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 147 DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
|++|+||.+. +..++.++.+|..+|..+.|-.+|..|++++.||.|++|++++.++++++
T Consensus 526 D~TvKIW~is--------------------~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl 585 (775)
T KOG0319|consen 526 DKTVKIWSIS--------------------TFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL 585 (775)
T ss_pred CceEEEEEec--------------------cceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh
Confidence 9999999998 67788888999999999999999999999999999999999999999999
Q ss_pred c-CCCCeeeeEecC
Q psy11036 227 D-YPSPVLSIDVSM 239 (239)
Q Consensus 227 ~-~~~~v~~~~~sp 239 (239)
. |...|++++-+|
T Consensus 586 D~H~DrvWaL~~~~ 599 (775)
T KOG0319|consen 586 DAHNDRVWALSVSP 599 (775)
T ss_pred hhccceeEEEeecC
Confidence 8 999999998765
No 33
>KOG0277|consensus
Probab=100.00 E-value=7.2e-32 Score=187.97 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=171.2
Q ss_pred CCCCEEEEeeCC-CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 5 LPILIVALWDIP-SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
..||.++|||+. ...+++.++.|. ..|.++.|++...+.+++++-|++|++|+...++.+.++ +
T Consensus 80 ~GDGSLrl~d~~~~s~Pi~~~kEH~--------------~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g 145 (311)
T KOG0277|consen 80 SGDGSLRLFDLTMPSKPIHKFKEHK--------------REVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG 145 (311)
T ss_pred ecCceEEEeccCCCCcchhHHHhhh--------------hheEEeccccccceeEEeeccCCceEeecCCCCcceEeecC
Confidence 468999999964 346788899998 999999999988888999999999999999999999999 7
Q ss_pred CCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccce
Q psy11036 83 HGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 83 ~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
|...|...+|+|. ...+++++ |+.+++||++..++.+. +..|...|.++.|+. +.+.+++|+.|+.|++||++
T Consensus 146 h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir--- 221 (311)
T KOG0277|consen 146 HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIR--- 221 (311)
T ss_pred CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehh---
Confidence 9999999999994 56666666 89999999997777666 889999999999987 56789999999999999988
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCCee-eEEec-CCCCeeeeE
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNFSP-VHTLD-YPSPVLSID 236 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~-~~~~~-~~~~v~~~~ 236 (239)
+-..++.++.+|.-+|..+.|||. ..+|++++.|-++||||...+.. +.+.. |..-+..+.
T Consensus 222 ----------------~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~D 285 (311)
T KOG0277|consen 222 ----------------NLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLD 285 (311)
T ss_pred ----------------hccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccc
Confidence 224667788999999999999995 56889999999999999985543 44444 666777777
Q ss_pred ecC
Q psy11036 237 VSM 239 (239)
Q Consensus 237 ~sp 239 (239)
||+
T Consensus 286 ws~ 288 (311)
T KOG0277|consen 286 WSL 288 (311)
T ss_pred ccc
Confidence 764
No 34
>KOG0645|consensus
Probab=100.00 E-value=5e-30 Score=180.22 Aligned_cols=186 Identities=24% Similarity=0.314 Sum_probs=160.9
Q ss_pred CCCCCCCCEEEEeeCCCc---ceeeee-eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-
Q psy11036 1 MSHDLPILIVALWDIPSE---AQVSTF-TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP- 75 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~- 75 (239)
|.+.|.|+.|++|+...+ .+...+ .+|+ ..|++++|+| .+++|++|+.|.++.||.-..+
T Consensus 30 lAscg~Dk~vriw~~~~~~s~~ck~vld~~hk--------------rsVRsvAwsp-~g~~La~aSFD~t~~Iw~k~~~e 94 (312)
T KOG0645|consen 30 LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHK--------------RSVRSVAWSP-HGRYLASASFDATVVIWKKEDGE 94 (312)
T ss_pred EEeecCCceEEEEecCCCCcEEEEEeccccch--------------heeeeeeecC-CCcEEEEeeccceEEEeecCCCc
Confidence 456789999999998743 333333 3577 8999999999 8999999999999999987644
Q ss_pred -Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEcc--CCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 76 -DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDML--GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 76 -~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~--~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
+++.++ +|+..|.+++|+++|.+||+++ |..|-+|.+. ...+....++.|...|..+.|+|....|++++.|++|
T Consensus 95 fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTI 174 (312)
T KOG0645|consen 95 FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTI 174 (312)
T ss_pred eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeE
Confidence 466677 7999999999999999999999 8999999987 3456778899999999999999999999999999999
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
++|.-. | ...-++..++.+|...|.+++|++.|..|++++.|++++||...
T Consensus 175 k~~~~~----------------~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 175 KVYRDE----------------D-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred EEEeec----------------C-CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 999765 1 22467888999999999999999999999999999999999864
No 35
>KOG1407|consensus
Probab=100.00 E-value=1.9e-30 Score=181.53 Aligned_cols=202 Identities=17% Similarity=0.191 Sum_probs=181.0
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
|.+.+.|..|++||.+.++++..+.... +.+ -+.|+| ++++++.++.|..|...|.++.+....
T Consensus 80 ~atas~dk~ir~wd~r~~k~~~~i~~~~--------------eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~ 143 (313)
T KOG1407|consen 80 FATASGDKTIRIWDIRSGKCTARIETKG--------------ENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVNE 143 (313)
T ss_pred eEEecCCceEEEEEeccCcEEEEeeccC--------------cce-EEEEcC-CCCEEEEecCcccEEEEEecccceeeh
Confidence 3456788999999999999998887764 444 678999 899999999999999999999988888
Q ss_pred ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 81 VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
.+....+..+.|+.++.+++... .|.|.|.... .-+++..+++|.....||.|+|+|++||+|+.|..+.+||++
T Consensus 144 ~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyp-sLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~--- 219 (313)
T KOG1407|consen 144 EQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYP-SLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD--- 219 (313)
T ss_pred hcccceeeeeeecCCCCEEEEecCCceEEEEecc-ccccccccccCCcceEEEEECCCCceEeeccccceeeccChh---
Confidence 87788889999987777666555 6999999888 888999999999999999999999999999999999999998
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.-.+++.+..+.-+|..++||.||++||++|+|..|-|=++++|..+..+++.++...++|+|
T Consensus 220 -----------------ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHP 282 (313)
T KOG1407|consen 220 -----------------ELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHP 282 (313)
T ss_pred -----------------HhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecC
Confidence 445566667788999999999999999999999999999999999999999999999999998
No 36
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.98 E-value=7.3e-30 Score=216.98 Aligned_cols=207 Identities=19% Similarity=0.226 Sum_probs=173.7
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.+.||.|++||+.+++.+..+.+|. +.|++++|+|.++.+|++|+.|++|++||++++..+..+.+
T Consensus 551 ~~~Dg~v~lWd~~~~~~~~~~~~H~--------------~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~ 616 (793)
T PLN00181 551 SNFEGVVQVWDVARSQLVTEMKEHE--------------KRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 616 (793)
T ss_pred EeCCCeEEEEECCCCeEEEEecCCC--------------CCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 3568999999999999999999998 99999999975788999999999999999999988888866
Q ss_pred CCCEEEEEEe-cCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 84 GSPVESVLCL-PSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~-~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
...+.++.|+ +++..+++|+ |+.|++||++.....+..+.+|...|.++.|. ++.+|++++.|++|++||++... .
T Consensus 617 ~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~-~ 694 (793)
T PLN00181 617 KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSI-S 694 (793)
T ss_pred CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCc-c
Confidence 6789999996 4688999988 89999999984444677788999999999997 67899999999999999987110 0
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--------------
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-------------- 227 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------------- 227 (239)
.....++..+.+|...+..++|+|++++|++|+.|+.|++|+.....++..+.
T Consensus 695 -------------~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~ 761 (793)
T PLN00181 695 -------------GINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDD 761 (793)
T ss_pred -------------ccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCC
Confidence 00135667788999999999999999999999999999999987665543321
Q ss_pred CCCCeeeeEecC
Q psy11036 228 YPSPVLSIDVSM 239 (239)
Q Consensus 228 ~~~~v~~~~~sp 239 (239)
+...|.+++|+|
T Consensus 762 ~~~~V~~v~ws~ 773 (793)
T PLN00181 762 ASQFISSVCWRG 773 (793)
T ss_pred CCcEEEEEEEcC
Confidence 234699999986
No 37
>KOG0643|consensus
Probab=99.98 E-value=5.4e-30 Score=179.84 Aligned_cols=202 Identities=20% Similarity=0.268 Sum_probs=184.7
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.+.|....||-..+|+.+.++.+|. +.|.|++.+. +...+++|+.|.++++||+++|+++.+++.
T Consensus 28 caKD~~~~vw~s~nGerlGty~GHt--------------GavW~~Did~-~s~~liTGSAD~t~kLWDv~tGk~la~~k~ 92 (327)
T KOG0643|consen 28 CAKDSTPTVWYSLNGERLGTYDGHT--------------GAVWCCDIDW-DSKHLITGSADQTAKLWDVETGKQLATWKT 92 (327)
T ss_pred ecCCCCceEEEecCCceeeeecCCC--------------ceEEEEEecC-CcceeeeccccceeEEEEcCCCcEEEEeec
Confidence 4688999999988999999999999 9999999998 789999999999999999999999999999
Q ss_pred CCCEEEEEEecCCcEEEEeCC------CcEEEEEccC------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEE
Q psy11036 84 GSPVESVLCLPSGGIFVTGGG------LDVCIWDMLG------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~------~~i~~~d~~~------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
+.+|..+.|+++|.+++...| +.|.++|++. ..+++..+..+...++.+.|.|-+++|++|.+||.|.
T Consensus 93 ~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is 172 (327)
T KOG0643|consen 93 NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSIS 172 (327)
T ss_pred CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEE
Confidence 999999999999998887763 5689999973 2456778888889999999999999999999999999
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 231 (239)
+||++ ++.+.+..-+.|...|+.+++++|..+++|+|.|.+-++||+.+.+.++++....|
T Consensus 173 ~~da~-------------------~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~P 233 (327)
T KOG0643|consen 173 IYDAR-------------------TGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERP 233 (327)
T ss_pred EEEcc-------------------cCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeeccc
Confidence 99987 33466666688999999999999999999999999999999999999999999999
Q ss_pred eeeeEecC
Q psy11036 232 VLSIDVSM 239 (239)
Q Consensus 232 v~~~~~sp 239 (239)
|++.+++|
T Consensus 234 vN~aaisP 241 (327)
T KOG0643|consen 234 VNTAAISP 241 (327)
T ss_pred ccceeccc
Confidence 99999988
No 38
>KOG0291|consensus
Probab=99.97 E-value=9.5e-30 Score=200.62 Aligned_cols=207 Identities=22% Similarity=0.365 Sum_probs=177.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.||.|+|||..++-+..+|..|+ ..|+.+.|+. .++.+++.+.||+|+.||+...+.-+++..+
T Consensus 369 ~eDgKVKvWn~~SgfC~vTFteHt--------------s~Vt~v~f~~-~g~~llssSLDGtVRAwDlkRYrNfRTft~P 433 (893)
T KOG0291|consen 369 AEDGKVKVWNTQSGFCFVTFTEHT--------------SGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKRYRNFRTFTSP 433 (893)
T ss_pred cCCCcEEEEeccCceEEEEeccCC--------------CceEEEEEEe-cCCEEEEeecCCeEEeeeecccceeeeecCC
Confidence 578999999999999999999999 9999999999 8999999999999999999999998888544
Q ss_pred --CCEEEEEEecCCcEEEEeC-C-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc--c
Q psy11036 85 --SPVESVLCLPSGGIFVTGG-G-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL--K 158 (239)
Q Consensus 85 --~~v~~~~~~~~~~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~--~ 158 (239)
....|++..|.|..+++|+ | -.|++|+++ +++.+..+.+|.+||.+++|+|++..|++++.|.+|++||+-. .
T Consensus 434 ~p~QfscvavD~sGelV~AG~~d~F~IfvWS~q-TGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~ 512 (893)
T KOG0291|consen 434 EPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQ-TGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSG 512 (893)
T ss_pred CceeeeEEEEcCCCCEEEeeccceEEEEEEEee-cCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCc
Confidence 4557888899999999998 5 679999999 9999999999999999999999999999999999999999851 1
Q ss_pred eEee---------------------eecceeEEEEEccCCCEEE---------------EEE----ecccCcEEEEEEcc
Q psy11036 159 TVSS---------------------FTGGLDVCIWDMLGGGKLL---------------HKF----TCHHKTVTSLCLAS 198 (239)
Q Consensus 159 ~~~~---------------------~~~~~~i~~~d~~~~~~~~---------------~~~----~~h~~~v~~~~~s~ 198 (239)
.+.+ .+-+++|.+||+....+.- ..+ .......+.+++|+
T Consensus 513 ~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySa 592 (893)
T KOG0291|consen 513 TVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSA 592 (893)
T ss_pred eeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcC
Confidence 2222 2557789999986543320 001 11235689999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
||..+++|+....|+||++.++-.+++++
T Consensus 593 DG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 593 DGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred CCCEEEecCCcccEEEEECchhheeeeEE
Confidence 99999999999999999999999988876
No 39
>KOG0281|consensus
Probab=99.97 E-value=4e-32 Score=197.25 Aligned_cols=193 Identities=24% Similarity=0.402 Sum_probs=150.4
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
..+|.+|.|||..+..+.+.+.+|. +.|.|+.|. .+.+++|+.|.+|++||+.+++++.++ .
T Consensus 213 GlrDnTikiWD~n~~~c~~~L~GHt--------------GSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tlih 275 (499)
T KOG0281|consen 213 GLRDNTIKIWDKNSLECLKILTGHT--------------GSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLIH 275 (499)
T ss_pred ccccCceEEeccccHHHHHhhhcCC--------------CcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHhh
Confidence 4578999999999999999999999 999999995 469999999999999999999999988 7
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
|...|..+.|+ ..++++++ |.++.+||+..+.. ..+.+.+|...|..+.| +.+++++++.|.+|++|++. .+
T Consensus 276 HceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~~st~e 351 (499)
T KOG0281|consen 276 HCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 351 (499)
T ss_pred hcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecc--ccceEEEecCCceEEEEecccee
Confidence 99999999997 45777777 89999999984432 23456799999999999 45699999999999999998 44
Q ss_pred eEeee--------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 159 TVSSF--------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 159 ~~~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
.+.++ +.+..|++||+. .+.++..+++|+.-|.++.| |.+.+++|+.||+|++||+.
T Consensus 352 fvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~-~G~cLRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~ 428 (499)
T KOG0281|consen 352 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 428 (499)
T ss_pred eehhhhcccccceehhccCeEEEecCCCceEEEEecc-ccHHHHHHhchHHhhhheee--cCceeeeccccceEEEEecc
Confidence 44444 122335666642 55566666666666666665 36666666666666666655
Q ss_pred CC
Q psy11036 219 NF 220 (239)
Q Consensus 219 ~~ 220 (239)
.+
T Consensus 429 aa 430 (499)
T KOG0281|consen 429 AA 430 (499)
T ss_pred cc
Confidence 44
No 40
>KOG0266|consensus
Probab=99.97 E-value=1.5e-29 Score=201.85 Aligned_cols=176 Identities=24% Similarity=0.407 Sum_probs=159.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--ceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~ 118 (239)
..|.++.|++ +++.+++++.|+.+++|+..+.+ ....+ +|...|.+++|+|+++++++++ |+++++||+...+..
T Consensus 160 ~sv~~~~fs~-~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~ 238 (456)
T KOG0266|consen 160 PSVTCVDFSP-DGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRN 238 (456)
T ss_pred CceEEEEEcC-CCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeE
Confidence 7899999999 78889999999999999997776 55555 6999999999999999999999 799999999657789
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
++++++|...|++++|+|+|+.+++|+.|++|+|||++ .+++...+.+|.+.|++++|++
T Consensus 239 ~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~--------------------~~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 239 LKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR--------------------TGECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred EEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEecc--------------------CCeEEEeeeccCCceEEEEECC
Confidence 99999999999999999999999999999999999998 5788888899999999999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCe--eeEEec-CCC--CeeeeEecC
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFS--PVHTLD-YPS--PVLSIDVSM 239 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~-~~~--~v~~~~~sp 239 (239)
++++|++++.|+.|+|||+.+++ ++..+. ... ++++++|+|
T Consensus 299 d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp 344 (456)
T KOG0266|consen 299 DGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSP 344 (456)
T ss_pred CCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECC
Confidence 99999999999999999999999 556665 222 589999987
No 41
>KOG0313|consensus
Probab=99.97 E-value=2.4e-29 Score=184.14 Aligned_cols=218 Identities=22% Similarity=0.329 Sum_probs=181.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
.-||.+++||. .|+...++.+|. ++|.+++|.--+ ...+++++.|.++++|..+.+......
T Consensus 122 sYDg~~riWd~-~Gk~~~~~~Ght--------------~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~ 186 (423)
T KOG0313|consen 122 SYDGTSRIWDL-KGKSIKTIVGHT--------------GPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKAL 186 (423)
T ss_pred ecCCeeEEEec-CCceEEEEecCC--------------cceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHH
Confidence 46899999997 788899999999 999988887522 235999999999999999877543221
Q ss_pred ----cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC------------------------CCeEEEEEeccCCceEEE
Q psy11036 82 ----NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG------------------------GGKLLHKFTCHHKTVTSL 132 (239)
Q Consensus 82 ----~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~------------------------~~~~~~~~~~~~~~i~~i 132 (239)
+|+..|.++...+++..+++|+ |..+.+|+... .+.++..+.+|..+|.++
T Consensus 187 ~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V 266 (423)
T KOG0313|consen 187 KVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV 266 (423)
T ss_pred hHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE
Confidence 6999999999999999999999 99999999321 134677788999999999
Q ss_pred EEcCCCCEEEEEecCCeEEEEEcc-cceEeee-------------------ec--ceeEEEEEccCCC--EEEEEEeccc
Q psy11036 133 CLASGGKRLISASLDHHAKIYEMT-LKTVSSF-------------------TG--GLDVCIWDMLGGG--KLLHKFTCHH 188 (239)
Q Consensus 133 ~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------------------~~--~~~i~~~d~~~~~--~~~~~~~~h~ 188 (239)
.|++ ...+.+++.|.+|+.||+. +....++ +| +..+++||.++.. ...+.+.+|.
T Consensus 267 ~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~ 345 (423)
T KOG0313|consen 267 VWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHK 345 (423)
T ss_pred EEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecch
Confidence 9987 6789999999999999998 5544443 22 3449999998753 4567789999
Q ss_pred CcEEEEEEccCC-CeEEEEcCCceEEEEEccCCe-eeEEec-CCCCeeeeEec
Q psy11036 189 KTVTSLCLASGG-KRLISASLDHHAKIYEMVNFS-PVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 189 ~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~-~~~~~~-~~~~v~~~~~s 238 (239)
+.|.++.|+|.. ..|++++.|+++++||+++-+ ++..+. |...|.++.|+
T Consensus 346 nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~ 398 (423)
T KOG0313|consen 346 NWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN 398 (423)
T ss_pred hhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc
Confidence 999999999954 567899999999999999877 999988 88999999986
No 42
>KOG0318|consensus
Probab=99.97 E-value=8.1e-29 Score=188.28 Aligned_cols=222 Identities=17% Similarity=0.218 Sum_probs=180.2
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeee---CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFT---NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
|.+.|.||.|.+||=.+++.+..+. +|+ +.|.+++|+| ++..+++++.|.+++|||+.+.+.
T Consensus 205 Fat~gsDgki~iyDGktge~vg~l~~~~aHk--------------GsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 205 FATAGSDGKIYIYDGKTGEKVGELEDSDAHK--------------GSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSL 269 (603)
T ss_pred EEEecCCccEEEEcCCCccEEEEecCCCCcc--------------ccEEEEEECC-CCceEEEecCCceEEEEEeeccce
Confidence 3445689999999999999999998 676 9999999999 899999999999999999999999
Q ss_pred eeeecCC----CCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 78 VMSVNHG----SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 78 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
+.++... .....+.|. ++.++.+..+|.|.+++.. ...++..+.+|...|+++..+|++++|++|+.||.|.-|
T Consensus 270 v~t~~~~~~v~dqqvG~lWq-kd~lItVSl~G~in~ln~~-d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W 347 (603)
T KOG0318|consen 270 VSTWPMGSTVEDQQVGCLWQ-KDHLITVSLSGTINYLNPS-DPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSW 347 (603)
T ss_pred EEEeecCCchhceEEEEEEe-CCeEEEEEcCcEEEEeccc-CCChhheecccccceeEEEEcCCCCEEEeeccCceEEEE
Confidence 9888433 233444554 4444444449999999998 566999999999999999999999999999999999999
Q ss_pred Ecc-cc-----------eEeee----------------------------------------------------------
Q psy11036 154 EMT-LK-----------TVSSF---------------------------------------------------------- 163 (239)
Q Consensus 154 d~~-~~-----------~~~~~---------------------------------------------------------- 163 (239)
+.. +. .+..+
T Consensus 348 ~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~ 427 (603)
T KOG0318|consen 348 DSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISD 427 (603)
T ss_pred ecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCc
Confidence 985 11 11111
Q ss_pred --------------------------------ec--ceeEEEEEccCCC-EEEEEEecccCcEEEEEEccCCCeEEEEcC
Q psy11036 164 --------------------------------TG--GLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 164 --------------------------------~~--~~~i~~~d~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
.| ++.+++|.+.... .....+..|.++|++++||||+.+||++..
T Consensus 428 iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da 507 (603)
T KOG0318|consen 428 IVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDA 507 (603)
T ss_pred EEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEecc
Confidence 01 2337778776643 344466789999999999999999999999
Q ss_pred CceEEEEEccCCeeeE-Eec-CCCCeeeeEecC
Q psy11036 209 DHHAKIYEMVNFSPVH-TLD-YPSPVLSIDVSM 239 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~-~~~-~~~~v~~~~~sp 239 (239)
.+.+.+||+.+.+... .+. |.+.|++++|+|
T Consensus 508 ~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP 540 (603)
T KOG0318|consen 508 SRKVVLYDVASREVKTNRWAFHTAKINCVAWSP 540 (603)
T ss_pred CCcEEEEEcccCceecceeeeeeeeEEEEEeCC
Confidence 9999999999887732 233 889999999998
No 43
>KOG1446|consensus
Probab=99.97 E-value=9.9e-29 Score=177.12 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=168.3
Q ss_pred CCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
|+...|.+|+..++.+.+.++.|.+|. ..|.+++.+| .++.+++++.|++|++||++..++...+
T Consensus 74 sStk~d~tIryLsl~dNkylRYF~GH~--------------~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l 138 (311)
T KOG1446|consen 74 SSTKEDDTIRYLSLHDNKYLRYFPGHK--------------KRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLL 138 (311)
T ss_pred ccCCCCCceEEEEeecCceEEEcCCCC--------------ceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEE
Confidence 344568899999999999999999999 9999999999 7799999999999999999988877766
Q ss_pred cCCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCC-CeEEEEEec---cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGG-GKLLHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~-~~~~~~~~~---~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
...+ -..++|+|+|-++|++.. +.|++||++.- +.+..++.- .....+.+.|+|+|++|+.+...+.+++.|.-
T Consensus 139 ~~~~-~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf 217 (311)
T KOG1446|consen 139 NLSG-RPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF 217 (311)
T ss_pred ecCC-CcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc
Confidence 4322 335789999999999985 59999999953 345555543 35688999999999999999999999999877
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcE---EEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCC
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV---TSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSP 231 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v---~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~ 231 (239)
.+..+..+..+...- ...+|+||++++++|+.||+|.+|++++++.+..+. +.++
T Consensus 218 --------------------~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~ 277 (311)
T KOG1446|consen 218 --------------------DGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGP 277 (311)
T ss_pred --------------------CCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCC
Confidence 344444445444322 577899999999999999999999999999999988 4678
Q ss_pred eeeeEecC
Q psy11036 232 VLSIDVSM 239 (239)
Q Consensus 232 v~~~~~sp 239 (239)
+.++.|+|
T Consensus 278 ~~~~~fnP 285 (311)
T KOG1446|consen 278 VSCVRFNP 285 (311)
T ss_pred ccccccCC
Confidence 99999988
No 44
>KOG0275|consensus
Probab=99.97 E-value=1.3e-30 Score=188.04 Aligned_cols=229 Identities=18% Similarity=0.238 Sum_probs=189.2
Q ss_pred CCCCC-------CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q psy11036 1 MSHDL-------PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 1 fs~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 73 (239)
||||| .||.|.+||..+|+..+.++-.. ...+-...++|.|+.|+. +.+.+++|+.||.|++|.++
T Consensus 221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQA------qd~fMMmd~aVlci~FSR-DsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQA------QDNFMMMDDAVLCISFSR-DSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred eCCCCceEeeccccceeeeehhccchhhhhhhhhh------hcceeecccceEEEeecc-cHHHhhccCcCCcEEEEEEe
Confidence 67776 47999999999998766554221 011222338999999999 89999999999999999999
Q ss_pred CCCceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 74 SPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 74 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
+|++++.+ .|...|+|+.|+.++..+.+++ |.++++.-+. .++.++.+++|...|+...|.++|.++++++.||+|
T Consensus 294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlK-SGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtv 372 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLK-SGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTV 372 (508)
T ss_pred cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccc-cchhHHHhcCccccccceEEcCCCCeEEEecCCccE
Confidence 99999999 4999999999999999999998 8999999998 899999999999999999999999999999999999
Q ss_pred EEEEcc-cceEeeee-------------------------cceeEEEEEccCCCEEEEEEec---ccCcEEEEEEccCCC
Q psy11036 151 KIYEMT-LKTVSSFT-------------------------GGLDVCIWDMLGGGKLLHKFTC---HHKTVTSLCLASGGK 201 (239)
Q Consensus 151 ~i~d~~-~~~~~~~~-------------------------~~~~i~~~d~~~~~~~~~~~~~---h~~~v~~~~~s~~~~ 201 (239)
++|+.+ .+++.++. ....+++.++ .++.+..+.. ..+...+.+.||.|.
T Consensus 373 kvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~--qGQvVrsfsSGkREgGdFi~~~lSpkGe 450 (508)
T KOG0275|consen 373 KVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM--QGQVVRSFSSGKREGGDFINAILSPKGE 450 (508)
T ss_pred EEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec--cceEEeeeccCCccCCceEEEEecCCCc
Confidence 999999 78777762 1233555554 3455655543 234566778999999
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++.+.+.|+.++.|...+|+.-.++. |+..+..++-+|
T Consensus 451 wiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHP 489 (508)
T KOG0275|consen 451 WIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHP 489 (508)
T ss_pred EEEEEccCcEEEEEEeecCceeeeeecccccccccccCc
Confidence 99999999999999999999998888 666776666555
No 45
>KOG0277|consensus
Probab=99.97 E-value=7.7e-29 Score=172.93 Aligned_cols=200 Identities=18% Similarity=0.249 Sum_probs=164.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-Cceeee-cCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMSV-NHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~-~~~ 84 (239)
.|.+.|.++..++-+.++..-.. .+.+..++|++...+.+++++.||++++||+... .++..+ +|.
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~------------~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~ 104 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDT------------EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHK 104 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeec------------ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhh
Confidence 48899999865554444433210 0789999999988889999999999999997533 466666 699
Q ss_pred CCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEe
Q psy11036 85 SPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 85 ~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
..|.++.|++- +..+++++ |++|++|+.. ..+.+.++.+|...|...+|+| ..+.+++++.|+.+++||++
T Consensus 105 ~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~-r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr----- 178 (311)
T KOG0277|consen 105 REVYSVDWNTVRRRIFLTSSWDGTIKLWDPN-RPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVR----- 178 (311)
T ss_pred hheEEeccccccceeEEeeccCCceEeecCC-CCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEec-----
Confidence 99999999984 45566666 9999999998 7888999999999999999999 56899999999999999988
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCC-eeeEEec-CCCCeeeeEec
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNF-SPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~-~~~~v~~~~~s 238 (239)
..++.+. +..|...|.++.|+. +.+.|+||+.|+.|++||+++. .++..+. |.-.|..+.||
T Consensus 179 --------------~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~S 243 (311)
T KOG0277|consen 179 --------------SPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFS 243 (311)
T ss_pred --------------CCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecC
Confidence 2234443 688999999999997 6778999999999999999875 5677777 77799999999
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 244 p 244 (311)
T KOG0277|consen 244 P 244 (311)
T ss_pred c
Confidence 8
No 46
>KOG0295|consensus
Probab=99.97 E-value=6.1e-29 Score=181.16 Aligned_cols=179 Identities=23% Similarity=0.417 Sum_probs=166.4
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
..++|.+|+.|+..++.++.++.+|. ..|..++.+. ++.++++++.|.+|++|-+.++++...+
T Consensus 210 S~srD~tik~We~~tg~cv~t~~~h~--------------ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k~~lR 274 (406)
T KOG0295|consen 210 SCSRDNTIKAWECDTGYCVKTFPGHS--------------EWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCKAELR 274 (406)
T ss_pred ecccccceeEEecccceeEEeccCch--------------HhEEEEEecC-CeeEEEecCCCceEEEEEeccchhhhhhh
Confidence 46789999999999999999999999 9999999999 8999999999999999999999888877
Q ss_pred cCCCCEEEEEEecC---------------CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe
Q psy11036 82 NHGSPVESVLCLPS---------------GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 82 ~~~~~v~~~~~~~~---------------~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~ 145 (239)
.|+-+|.+++|.|. ++++.+++ |++|++||+. .+..+.++.+|.+.|..++|+|.|++|+++.
T Consensus 275 ~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~-tg~cL~tL~ghdnwVr~~af~p~Gkyi~Sca 353 (406)
T KOG0295|consen 275 EHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS-TGMCLFTLVGHDNWVRGVAFSPGGKYILSCA 353 (406)
T ss_pred ccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc-CCeEEEEEecccceeeeeEEcCCCeEEEEEe
Confidence 69999999999763 24788888 8999999999 8999999999999999999999999999999
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.|+++++||++ ..+++..+..|..-|+++.|+.+..+++||+-|..+++|..
T Consensus 354 DDktlrvwdl~--------------------~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 354 DDKTLRVWDLK--------------------NLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cCCcEEEEEec--------------------cceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999998 67788888999999999999999999999999999999974
No 47
>KOG0273|consensus
Probab=99.97 E-value=5.2e-29 Score=186.95 Aligned_cols=181 Identities=21% Similarity=0.379 Sum_probs=163.6
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
|...+.||.|+|+.+...+++.++.+|. ++|.++.|+| .+.+|++++.|++++||+.........
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~--------------g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~~~~~~ 396 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHH--------------GEVNALKWNP-TGSLLASCSDDGTLKIWSMGQSNSVHD 396 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeeccc--------------CceEEEEECC-CCceEEEecCCCeeEeeecCCCcchhh
Confidence 5677889999999999999999999999 9999999999 899999999999999999988888887
Q ss_pred e-cCCCCEEEEEEecCCc---------EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCe
Q psy11036 81 V-NHGSPVESVLCLPSGG---------IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~---------~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
+ .|...|..+.|+|.|. .+++++ |++|++||+. .+.+++.+..|..+|.+++|+|+|+++|+|+.||.
T Consensus 397 l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~-~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~ 475 (524)
T KOG0273|consen 397 LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE-SGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGC 475 (524)
T ss_pred hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc-CCceeEeeccCCCceEEEEecCCCcEEEecCCCCe
Confidence 7 6999999999999653 566666 8999999999 89999999999999999999999999999999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
|.+|+.+ .++.++.+.+ .+.|..++|+.+|..|..+-.|+.+++.|++
T Consensus 476 V~iws~~--------------------~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 476 VHIWSTK--------------------TGKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred eEecccc--------------------chheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999998 4566666665 5669999999999999999999999999875
No 48
>KOG0289|consensus
Probab=99.97 E-value=4.4e-29 Score=185.72 Aligned_cols=200 Identities=20% Similarity=0.274 Sum_probs=176.2
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
-|.|..+.++|..+++.+.+|++|. ..|+.+.++| +...+++++.|..|+||........... .
T Consensus 237 GG~d~~av~~d~~s~q~l~~~~Gh~--------------kki~~v~~~~-~~~~v~~aSad~~i~vws~~~~s~~~~~~~ 301 (506)
T KOG0289|consen 237 GGEDKTAVLFDKPSNQILATLKGHT--------------KKITSVKFHK-DLDTVITASADEIIRVWSVPLSSEPTSSRP 301 (506)
T ss_pred cCCCCceEEEecchhhhhhhccCcc--------------eEEEEEEecc-chhheeecCCcceEEeeccccccCcccccc
Confidence 4678899999999999999999999 9999999999 7889999999999999999877655555 7
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
|.++|+.+..+|.|.+|++++ |+...+.|++ .+..+..... ..-.+++.+|+|||..|.+|..|+.++|||+.
T Consensus 302 h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~-~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk--- 377 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGEYLLSASNDGTWAFSDIS-SGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK--- 377 (506)
T ss_pred ccccceeeeeccCCcEEEEecCCceEEEEEcc-CCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC---
Confidence 999999999999999999999 7999999999 6666555443 22468999999999999999999999999998
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCC--CeeeeEe
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS--PVLSIDV 237 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~ 237 (239)
.+..+..|.+|.++|..++|+.||-+|+++++|+.|++||++..+..+++..+. ++.+++|
T Consensus 378 -----------------s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f 440 (506)
T KOG0289|consen 378 -----------------SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF 440 (506)
T ss_pred -----------------CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE
Confidence 445667778999999999999999999999999999999999999988888544 5888887
Q ss_pred cC
Q psy11036 238 SM 239 (239)
Q Consensus 238 sp 239 (239)
.+
T Consensus 441 D~ 442 (506)
T KOG0289|consen 441 DQ 442 (506)
T ss_pred cC
Confidence 53
No 49
>KOG0318|consensus
Probab=99.97 E-value=3.4e-28 Score=184.93 Aligned_cols=211 Identities=21% Similarity=0.310 Sum_probs=178.3
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSP 86 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~ 86 (239)
|.+.+|| +|..+.++.+|. ..|.+++|-|...-++++|++|++|.+|+=...+-..++ .|..-
T Consensus 129 g~~F~~D--SG~SvGei~GhS--------------r~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskF 192 (603)
T KOG0318|consen 129 GHVFLWD--SGNSVGEITGHS--------------RRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKF 192 (603)
T ss_pred eEEEEec--CCCccceeeccc--------------eeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccc
Confidence 5666666 788889999999 899999999976779999999999999986655555555 58889
Q ss_pred EEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 87 VESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
|.|+.|+|||.++++++ ||.+.+||-. +++.+..+. +|.+.|.+++|+||+..+++++.|.+++|||+. .+.+.
T Consensus 193 V~~VRysPDG~~Fat~gsDgki~iyDGk-tge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 193 VNCVRYSPDGSRFATAGSDGKIYIYDGK-TGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVS 271 (603)
T ss_pred eeeEEECCCCCeEEEecCCccEEEEcCC-CccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEE
Confidence 99999999999999988 8999999998 889998888 899999999999999999999999999999998 66666
Q ss_pred ee-----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 162 SF-----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 162 ~~-----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
++ +-++.+.+++.... .+...+.+|...|+++..+|++++|++|+.||.|.-|+..
T Consensus 272 t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~-~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~ 350 (603)
T KOG0318|consen 272 TWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDP-SVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSG 350 (603)
T ss_pred EeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCC-ChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecC
Confidence 55 23444666776654 4888899999999999999999999999999999999998
Q ss_pred CCeeeEEec--CCCCeeeeE
Q psy11036 219 NFSPVHTLD--YPSPVLSID 236 (239)
Q Consensus 219 ~~~~~~~~~--~~~~v~~~~ 236 (239)
+|..-+... |...|..++
T Consensus 351 ~g~~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 351 SGTSDRLAGKGHTNQIKGMA 370 (603)
T ss_pred CccccccccccccceEEEEe
Confidence 876544331 555555554
No 50
>KOG0293|consensus
Probab=99.97 E-value=4.6e-29 Score=184.75 Aligned_cols=217 Identities=20% Similarity=0.362 Sum_probs=179.9
Q ss_pred CCCCEEEEeeCCCc---ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDIPSE---AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
++|.+..+|++... +...++.+|. .+|.-+.|+| +.++|++++.|..+.+||+.++.....+
T Consensus 243 SkD~Taiiw~v~~d~~~kl~~tlvgh~--------------~~V~yi~wSP-DdryLlaCg~~e~~~lwDv~tgd~~~~y 307 (519)
T KOG0293|consen 243 SKDSTAIIWIVVYDVHFKLKKTLVGHS--------------QPVSYIMWSP-DDRYLLACGFDEVLSLWDVDTGDLRHLY 307 (519)
T ss_pred cCCceEEEEEEecCcceeeeeeeeccc--------------CceEEEEECC-CCCeEEecCchHheeeccCCcchhhhhc
Confidence 46789999987543 4577889998 9999999999 8899999999999999999999998888
Q ss_pred cC--CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-CceEEEEEcCCCCEEEEEecCCeEEEEEcc-
Q psy11036 82 NH--GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMT- 156 (239)
Q Consensus 82 ~~--~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~- 156 (239)
++ ...+.+++|.|||..+++|+ |+.+..||++ +......++.. ..|.+++..+||+++++.+.|..|++++..
T Consensus 308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD--gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~ 385 (519)
T KOG0293|consen 308 PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD--GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREA 385 (519)
T ss_pred ccCcCCCcceeEEccCCceeEecCCCCcEEEecCC--cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhh
Confidence 54 47899999999999999999 8999999996 55555555443 468999999999999999999999999986
Q ss_pred c--c-------eEeee--e----------cceeEEEEEccCCCEEEEEEecccCc--EEEEEEcc-CCCeEEEEcCCceE
Q psy11036 157 L--K-------TVSSF--T----------GGLDVCIWDMLGGGKLLHKFTCHHKT--VTSLCLAS-GGKRLISASLDHHA 212 (239)
Q Consensus 157 ~--~-------~~~~~--~----------~~~~i~~~d~~~~~~~~~~~~~h~~~--v~~~~~s~-~~~~l~s~s~d~~i 212 (239)
. . .+.++ + ....+.+||+. +...+..+.||... +..-+|.- +..++++||+|+.|
T Consensus 386 ~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~-e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kv 464 (519)
T KOG0293|consen 386 RVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE-ENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKV 464 (519)
T ss_pred hhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecc-hhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceE
Confidence 1 1 12222 2 23448999998 47778888888765 33445654 55899999999999
Q ss_pred EEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+||+..+++++..+. |...|++++|+|
T Consensus 465 yIWhr~sgkll~~LsGHs~~vNcVswNP 492 (519)
T KOG0293|consen 465 YIWHRISGKLLAVLSGHSKTVNCVSWNP 492 (519)
T ss_pred EEEEccCCceeEeecCCcceeeEEecCC
Confidence 999999999999999 888999999998
No 51
>KOG0269|consensus
Probab=99.97 E-value=4.9e-30 Score=202.58 Aligned_cols=202 Identities=22% Similarity=0.290 Sum_probs=173.9
Q ss_pred CCCCCCEEEEeeCCC---cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 3 HDLPILIVALWDIPS---EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
+.+..|.|.+||+.. .+++..|..|+ ..++++.|++...++|++|+.||+|++||++..+...
T Consensus 105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~--------------Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~ 170 (839)
T KOG0269|consen 105 TCSTNGVISVWDLNKSIRNKLLTVFNEHE--------------RSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKS 170 (839)
T ss_pred eecCCCcEEEEecCccccchhhhHhhhhc--------------cceeeeeeccCCccEEEecCCCceEEEEeeecccccc
Confidence 456789999999976 56677899999 9999999999889999999999999999999888877
Q ss_pred ee-cCCCCEEEEEEec-CCcEEEEeCC-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 80 SV-NHGSPVESVLCLP-SGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~-~~~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
++ .....|..+.|+| .+..++++.| |.+.+||++...+....+.+|.++|.++.|+|++.+||+||.|++|+|||+.
T Consensus 171 t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 171 TFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred cccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 77 6778899999999 4667777775 9999999998888888999999999999999999999999999999999997
Q ss_pred -c--ceEeee------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcC
Q psy11036 157 -L--KTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASL 208 (239)
Q Consensus 157 -~--~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~ 208 (239)
. ....++ .++..|++||++...-+...+..|...++.++|.. |...|.+++.
T Consensus 251 ~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sK 330 (839)
T KOG0269|consen 251 DSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSK 330 (839)
T ss_pred CCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecC
Confidence 2 222222 34566999999999999999999999999999976 4567889999
Q ss_pred CceEEEEEcc
Q psy11036 209 DHHAKIYEMV 218 (239)
Q Consensus 209 d~~i~iwd~~ 218 (239)
||.|..-.++
T Consensus 331 D~tv~qh~~k 340 (839)
T KOG0269|consen 331 DGTVLQHLFK 340 (839)
T ss_pred ccHHHHhhhh
Confidence 9987654443
No 52
>KOG0265|consensus
Probab=99.97 E-value=7.6e-29 Score=176.57 Aligned_cols=202 Identities=20% Similarity=0.308 Sum_probs=168.0
Q ss_pred CCCCCCCCEEEEeeCC-CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 1 MSHDLPILIVALWDIP-SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
|.+.|.|..|.+|++. .-+....+++|. +.|..+.|.+ +++.+++++.|.+|+.||+++++.++
T Consensus 62 ~aSgG~Dr~I~LWnv~gdceN~~~lkgHs--------------gAVM~l~~~~-d~s~i~S~gtDk~v~~wD~~tG~~~r 126 (338)
T KOG0265|consen 62 FASGGSDRAIVLWNVYGDCENFWVLKGHS--------------GAVMELHGMR-DGSHILSCGTDKTVRGWDAETGKRIR 126 (338)
T ss_pred EeecCCcceEEEEeccccccceeeecccc--------------ceeEeeeecc-CCCEEEEecCCceEEEEecccceeee
Confidence 4456789999999964 445667889999 9999999999 89999999999999999999999999
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+ .|..-|..+.-+.-|..++..+ |+++++||++ .+..++++. ..-+++++.|..++..+.+|+-|+.|++||++
T Consensus 127 k~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R-~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r 204 (338)
T KOG0265|consen 127 KHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR-KKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLR 204 (338)
T ss_pred hhccccceeeecCccccCCeEEEecCCCceEEEEeec-ccchhhccc-cceeEEEEEecccccceeeccccCceeeeccc
Confidence 88 5888888887555566666555 6999999999 777777765 45689999999999999999999999999998
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe----eeEEec-----
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS----PVHTLD----- 227 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~----- 227 (239)
.......+.+|..+|+.+..+|+|.++.+-+.|.++++||++-.. ++..+.
T Consensus 205 --------------------~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hn 264 (338)
T KOG0265|consen 205 --------------------KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHN 264 (338)
T ss_pred --------------------cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhh
Confidence 466677789999999999999999999999999999999997543 344444
Q ss_pred CCCCeeeeEecC
Q psy11036 228 YPSPVLSIDVSM 239 (239)
Q Consensus 228 ~~~~v~~~~~sp 239 (239)
.+......+|+|
T Consensus 265 feknlL~cswsp 276 (338)
T KOG0265|consen 265 FEKNLLKCSWSP 276 (338)
T ss_pred hhhhcceeeccC
Confidence 223455566665
No 53
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=6.3e-28 Score=205.21 Aligned_cols=221 Identities=16% Similarity=0.224 Sum_probs=173.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----C----ce
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----D----PV 78 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----~----~~ 78 (239)
+|.+++|+..+.+....++... ...+.+.|.+++|+| +++++++|+.|+.|++|++... . +.
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~---------~~~~~~~V~~i~fs~-dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~ 526 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGD---------LLNSSNLVCAIGFDR-DGEFFATAGVNKKIKIFECESIIKDGRDIHYPV 526 (793)
T ss_pred hhhhhhhcccceEEEEeecccc---------ccCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEECCcccccccccccce
Confidence 4557777776555443333211 011228999999999 8999999999999999997542 1 22
Q ss_pred eeecCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEc
Q psy11036 79 MSVNHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 79 ~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~ 155 (239)
..+.+...+.+++|+| .+.++++++ |+.|++||+. .++.+..+.+|...|.+++|+| ++.+|++|+.|+.|++||+
T Consensus 527 ~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~-~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~ 605 (793)
T PLN00181 527 VELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVA-RSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605 (793)
T ss_pred EEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEEC
Confidence 3344567899999987 467888888 8999999998 7788889999999999999997 7889999999999999999
Q ss_pred c-cceEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 156 T-LKTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 156 ~-~~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
+ +..+..+ ..++.|++||+++...+...+.+|...|.++.|. ++.+|++++.|+.|
T Consensus 606 ~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~i 684 (793)
T PLN00181 606 NQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTL 684 (793)
T ss_pred CCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEE
Confidence 8 4443322 2345699999987666677788999999999997 78899999999999
Q ss_pred EEEEccC------CeeeEEec-CCCCeeeeEecC
Q psy11036 213 KIYEMVN------FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~------~~~~~~~~-~~~~v~~~~~sp 239 (239)
++||+.. .+++..+. |...+..++|+|
T Consensus 685 kiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~ 718 (793)
T PLN00181 685 KLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV 718 (793)
T ss_pred EEEeCCCCccccCCcceEEEcCCCCCeeEEEEcC
Confidence 9999974 35677776 777888888876
No 54
>KOG0305|consensus
Probab=99.97 E-value=8.3e-29 Score=192.01 Aligned_cols=196 Identities=20% Similarity=0.235 Sum_probs=174.0
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c-CC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N-HG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~-~~ 84 (239)
...|++|+..+++.......+. ..|+++.|++ ++.+|++|..+|.|.|||..+.+.+..+ . |.
T Consensus 196 g~~vylW~~~s~~v~~l~~~~~--------------~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~ 260 (484)
T KOG0305|consen 196 GQSVYLWSASSGSVTELCSFGE--------------ELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA 260 (484)
T ss_pred cceEEEEecCCCceEEeEecCC--------------CceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccccCCcC
Confidence 3589999999988666555556 8999999999 8999999999999999999998888877 4 89
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
..|-+++|. +..+.+|+ ++.|..+|++........+.+|...|..++|++|+.++|+|+.|+.+.|||..
T Consensus 261 ~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~------- 331 (484)
T KOG0305|consen 261 SRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL------- 331 (484)
T ss_pred ceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC-------
Confidence 999999998 66777777 89999999995444445588999999999999999999999999999999986
Q ss_pred ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEc--CCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISAS--LDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 164 ~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
..++...+..|..+|.+++|+| ...+||+|+ .|+.|++||..+++.+..+...+.|.+|.|+|
T Consensus 332 -------------~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk 397 (484)
T KOG0305|consen 332 -------------SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSK 397 (484)
T ss_pred -------------CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcC
Confidence 5677888899999999999999 567899876 59999999999999999999999999999986
No 55
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=2.1e-27 Score=178.77 Aligned_cols=194 Identities=25% Similarity=0.427 Sum_probs=168.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
++|.+++|+| +++++++++.||.+++|++.+++....+ .|...+..+.|+|+++.+++++ ++.+.+|++. ..+...
T Consensus 10 ~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~-~~~~~~ 87 (289)
T cd00200 10 GGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE-TGECVR 87 (289)
T ss_pred CCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC-cccceE
Confidence 9999999999 7899999999999999999988776666 5788889999999998888888 8999999998 667777
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee---------------------ec-ceeEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF---------------------TG-GLDVCIWDMLGG 177 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~---------------------~~-~~~i~~~d~~~~ 177 (239)
.+..|...+.++.|+++++++++++.|+.+.+||++ .+....+ .. ++.+.+||++.
T Consensus 88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~- 166 (289)
T cd00200 88 TLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT- 166 (289)
T ss_pred EEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc-
Confidence 888899999999999998888888889999999987 4433322 12 55699999875
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe-cCCCCeeeeEecC
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSIDVSM 239 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp 239 (239)
.+....+..|...+.++.|+|+++.+++++.|+.|++||+.+++.+..+ .+..++.+++|+|
T Consensus 167 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 229 (289)
T cd00200 167 GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSP 229 (289)
T ss_pred cccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcC
Confidence 5667777888889999999999999999999999999999999999988 4778999999986
No 56
>KOG0281|consensus
Probab=99.97 E-value=5.2e-30 Score=186.30 Aligned_cols=142 Identities=17% Similarity=0.322 Sum_probs=125.2
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee---
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM--- 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~--- 79 (239)
+.++|.+|++||+++++++.++-.|. +.|..+.|+. .++++++.|.++.+||+.....+.
T Consensus 252 sGSSDsTvrvWDv~tge~l~tlihHc--------------eaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rr 314 (499)
T KOG0281|consen 252 SGSSDSTVRVWDVNTGEPLNTLIHHC--------------EAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRR 314 (499)
T ss_pred ecCCCceEEEEeccCCchhhHHhhhc--------------ceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHH
Confidence 34689999999999999999999999 9999999964 699999999999999998776433
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT- 156 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~- 156 (239)
.+ +|...|+.+.|+ .+++++++ |.+|++|++. +.+.+.++.+|...|-|+.+ .++++++|+.|.+|++||+.
T Consensus 315 VLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~s-t~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~ 389 (499)
T KOG0281|consen 315 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS-TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC 389 (499)
T ss_pred HHhhhhhheeeeccc--cceEEEecCCceEEEEecc-ceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccc
Confidence 22 799999999996 56888888 8999999998 89999999999999999888 68999999999999999999
Q ss_pred cceEeeeecc
Q psy11036 157 LKTVSSFTGG 166 (239)
Q Consensus 157 ~~~~~~~~~~ 166 (239)
+.++..+.|.
T Consensus 390 G~cLRvLeGH 399 (499)
T KOG0281|consen 390 GACLRVLEGH 399 (499)
T ss_pred cHHHHHHhch
Confidence 7777766443
No 57
>KOG0316|consensus
Probab=99.96 E-value=2e-28 Score=169.21 Aligned_cols=180 Identities=18% Similarity=0.305 Sum_probs=160.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
++|..+.|+- ++++.++++.|.+|++|+...+..++++ +|...|..++.+.+...+++++ |..+.+||+. +++..+
T Consensus 18 gaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~-TGkv~R 95 (307)
T KOG0316|consen 18 GAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN-TGKVDR 95 (307)
T ss_pred cceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc-cCeeee
Confidence 9999999999 8999999999999999999999999999 7999999999999998888888 8999999999 999999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc---cceEeee--------------------ecceeEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT---LKTVSSF--------------------TGGLDVCIWDMLGG 177 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~--------------------~~~~~i~~~d~~~~ 177 (239)
++.+|.+.|+.++|+.+...+++|+.|.++++||.+ .++++.+ +.++.++.||++.+
T Consensus 96 r~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G 175 (307)
T KOG0316|consen 96 RFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKG 175 (307)
T ss_pred ecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecc
Confidence 999999999999999999999999999999999998 4444444 23566999999874
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+....+- ..+|++++|++|++..+.++.|+++++.|-.+|+.++.++
T Consensus 176 -~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk 222 (307)
T KOG0316|consen 176 -TLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK 222 (307)
T ss_pred -eeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc
Confidence 4433333 4689999999999999999999999999999999988776
No 58
>KOG0310|consensus
Probab=99.96 E-value=5.9e-28 Score=181.91 Aligned_cols=181 Identities=38% Similarity=0.651 Sum_probs=161.7
Q ss_pred CCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-Cceee
Q psy11036 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMS 80 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~ 80 (239)
+..+.|+.+++||+.+......+.+|+ +.|.|.+|+|.++++++||++||.|++||++.. ..+..
T Consensus 127 ~s~sDd~v~k~~d~s~a~v~~~l~~ht--------------DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~e 192 (487)
T KOG0310|consen 127 VSGSDDKVVKYWDLSTAYVQAELSGHT--------------DYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVE 192 (487)
T ss_pred EecCCCceEEEEEcCCcEEEEEecCCc--------------ceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEE
Confidence 445678999999999988766899999 999999999988889999999999999999987 67778
Q ss_pred ecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 81 VNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
+.|..+|..+.+-|.|..+++++...+++||+...++.+..+..|...|+|+++..++..|++++-|+.|++||+.
T Consensus 193 lnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t---- 268 (487)
T KOG0310|consen 193 LNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT---- 268 (487)
T ss_pred ecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc----
Confidence 8999999999999999999999999999999997778887777799999999999999999999999999999976
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
+.+.++.+.- .++|.+++.+|+++.++.|..||.+.+=+.
T Consensus 269 ----------------~~Kvv~s~~~-~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 269 ----------------NYKVVHSWKY-PGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred ----------------ceEEEEeeec-ccceeeEEecCCCceEEEecccceeeeehh
Confidence 3555555543 789999999999999999999998877644
No 59
>KOG0319|consensus
Probab=99.96 E-value=6.5e-29 Score=195.32 Aligned_cols=183 Identities=20% Similarity=0.294 Sum_probs=163.8
Q ss_pred CCCCCCCCEEEEeeCCCcceee---------eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEe
Q psy11036 1 MSHDLPILIVALWDIPSEAQVS---------TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 71 (239)
|.+-+.|.++++|++...+... +-..|. ..|.|++.+| +..+++|||.|++.++|+
T Consensus 427 fvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHd--------------KdIN~Vaia~-ndkLiAT~SqDktaKiW~ 491 (775)
T KOG0319|consen 427 FVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHD--------------KDINCVAIAP-NDKLIATGSQDKTAKIWD 491 (775)
T ss_pred EEEecCCceEEEecCCCcccccccceehhhHHHHhhc--------------ccccceEecC-CCceEEecccccceeeec
Confidence 3456789999999997622211 223455 8899999999 899999999999999999
Q ss_pred CCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCe
Q psy11036 72 TRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 72 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
++......++ +|...|.++.|+|..+.+++++ |.+|+||.+. +...++++.+|...|....|-.+|+.|++++.||.
T Consensus 492 le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is-~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGl 570 (775)
T KOG0319|consen 492 LEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS-TFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGL 570 (775)
T ss_pred ccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec-cceeeeeecCccceeEeeeeeeCCcEEEeccCCCc
Confidence 9988888888 7999999999999999999998 8999999999 99999999999999999999999999999999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+++|+++ +.+++.++..|...|.+++.+|....++||+.||.|.+|.-.+
T Consensus 571 iKlWnik--------------------t~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 571 IKLWNIK--------------------TNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred EEEEecc--------------------chhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 9999998 5777888899999999999999999999999999999996543
No 60
>KOG0278|consensus
Probab=99.96 E-value=1.4e-28 Score=171.43 Aligned_cols=183 Identities=20% Similarity=0.280 Sum_probs=159.7
Q ss_pred CCCCCEEEEeeCCCc-ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 4 DLPILIVALWDIPSE-AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
.|.++.+||||++.. .+..++.+|. +.|..+.|.. ..+.+++++.|++||+||.++++.+..+.
T Consensus 118 gg~ekllrvfdln~p~App~E~~ght--------------g~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~sL~ 182 (334)
T KOG0278|consen 118 GGQEKLLRVFDLNRPKAPPKEISGHT--------------GGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQSLE 182 (334)
T ss_pred cchHHHhhhhhccCCCCCchhhcCCC--------------CcceeEEEec-cCceEEeeccCCceEEEEeccCcEEEEEe
Confidence 356688999998764 4567888998 9999999999 78888888999999999999999999999
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
.+.+|+++..+++|+++..+..+.|.+||.. ...+++..+ ....|.+.+++|+...+++|++|..++.||..
T Consensus 183 ~~s~VtSlEvs~dG~ilTia~gssV~Fwdak-sf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~------ 254 (334)
T KOG0278|consen 183 FNSPVTSLEVSQDGRILTIAYGSSVKFWDAK-SFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYN------ 254 (334)
T ss_pred cCCCCcceeeccCCCEEEEecCceeEEeccc-cccceeecc-CccccccccccCCCceEEecCcceEEEEEecc------
Confidence 9999999999999999999999999999998 777777666 34568999999999999999999999999988
Q ss_pred eecceeEEEEEccCCCEEEEEE-ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
+++.+..+ ++|.++|.++.|+|+|...++||.||+|++|.+..++..
T Consensus 255 --------------TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 255 --------------TGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred --------------CCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 34444443 899999999999999999999999999999998665543
No 61
>KOG0275|consensus
Probab=99.96 E-value=4.8e-30 Score=185.16 Aligned_cols=173 Identities=24% Similarity=0.379 Sum_probs=156.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---------cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV---------NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~ 112 (239)
.-+.|..|+| ++++|++|+-||.|.+||..+|+....+ -+..+|.|+.|+.+...+++|+ ||.|++|.+
T Consensus 214 Sh~EcA~FSP-DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri 292 (508)
T KOG0275|consen 214 SHVECARFSP-DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRI 292 (508)
T ss_pred cchhheeeCC-CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEE
Confidence 6788999999 8999999999999999999998765443 2678999999999999999999 899999999
Q ss_pred cCCCeEEEEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 113 LGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 113 ~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
+ +++.++.+. +|...|+++.|+.|+..+++++.|.++++.-++ .++++.++++|.+-|
T Consensus 293 ~-tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlK--------------------SGK~LKEfrGHsSyv 351 (508)
T KOG0275|consen 293 E-TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLK--------------------SGKCLKEFRGHSSYV 351 (508)
T ss_pred e-cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccc--------------------cchhHHHhcCccccc
Confidence 9 888888887 899999999999999999999999999999888 577777789999999
Q ss_pred EEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec---CCCCeeeeEe
Q psy11036 192 TSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD---YPSPVLSIDV 237 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~ 237 (239)
+...|.+||..++++|.||+|++|+.++.+++.+++ .+-+|+++-.
T Consensus 352 n~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~ 400 (508)
T KOG0275|consen 352 NEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL 400 (508)
T ss_pred cceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE
Confidence 999999999999999999999999999999999887 3336776654
No 62
>KOG0274|consensus
Probab=99.96 E-value=1.7e-27 Score=190.43 Aligned_cols=212 Identities=25% Similarity=0.351 Sum_probs=185.8
Q ss_pred CCCCCEEEEeeCCCcceeee-eeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 4 DLPILIVALWDIPSEAQVST-FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
...+++|++||..++..+.. +.+|. +.|.++++.. .+.+|++|+.|.++++||..++++...+
T Consensus 224 ~s~~~tl~~~~~~~~~~i~~~l~GH~--------------g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~ 288 (537)
T KOG0274|consen 224 GSDDSTLHLWDLNNGYLILTRLVGHF--------------GGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQ 288 (537)
T ss_pred cCCCceeEEeecccceEEEeeccCCC--------------CCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEec
Confidence 45678999999999998888 99999 9999999987 7899999999999999999999999999
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
+|.+.+.++... ...+++|+ |.+|++|+++ ++..+..+.+|.++|.++..+ +.++++|+.|++|++||+. +++
T Consensus 289 gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~-n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 289 GHTSSVRCLTID--PFLLVSGSRDNTVKVWDVT-NGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred CCCceEEEEEcc--CceEeeccCCceEEEEecc-CcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhcee
Confidence 699999998775 34566666 8999999999 889999999999999999996 7899999999999999998 787
Q ss_pred Eeeeec---------------------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 160 VSSFTG---------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 160 ~~~~~~---------------------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+.++.| +..|++||+++..+++..+.+|..-+..+.+ .+++|++++.|++|++||..
T Consensus 364 l~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~ 441 (537)
T KOG0274|consen 364 LKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAE 441 (537)
T ss_pred eeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecc
Confidence 777633 2239999999854899999999998876655 47899999999999999999
Q ss_pred CCeeeEEecCC--CCeeeeEe
Q psy11036 219 NFSPVHTLDYP--SPVLSIDV 237 (239)
Q Consensus 219 ~~~~~~~~~~~--~~v~~~~~ 237 (239)
++++++.+... ..|.++++
T Consensus 442 ~~~~~~~~~~~~~~~v~~l~~ 462 (537)
T KOG0274|consen 442 EGECLRTLEGRHVGGVSALAL 462 (537)
T ss_pred cCceeeeeccCCcccEEEeec
Confidence 99999999853 67777765
No 63
>KOG0647|consensus
Probab=99.96 E-value=1.6e-27 Score=170.03 Aligned_cols=198 Identities=21% Similarity=0.402 Sum_probs=158.3
Q ss_pred cCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceee--ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC
Q psy11036 39 STPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMS--VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 39 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~ 114 (239)
+++.+.|.+++|+|+...++++++.|++||+|++.. +..+-+ ..|.++|.+++|+.+|..+++++ |+.+++||+.
T Consensus 24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~- 102 (347)
T KOG0647|consen 24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA- 102 (347)
T ss_pred CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc-
Confidence 345589999999997777888999999999999976 343332 26999999999999999999998 9999999998
Q ss_pred CCeEEEEEeccCCceEEEEEcCCCC--EEEEEecCCeEEEEEcc-cceEeee-------------------ecceeEEEE
Q psy11036 115 GGKLLHKFTCHHKTVTSLCLASGGK--RLISASLDHHAKIYEMT-LKTVSSF-------------------TGGLDVCIW 172 (239)
Q Consensus 115 ~~~~~~~~~~~~~~i~~i~~~~~~~--~l~~~~~d~~i~i~d~~-~~~~~~~-------------------~~~~~i~~~ 172 (239)
++ ....+..|.++|..+.|-+... .|++|+.|.+++.||++ ...+.++ +++..|.+|
T Consensus 103 S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 103 SG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVY 181 (347)
T ss_pred CC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEE
Confidence 55 5666778999999999987554 89999999999999999 5554443 344555566
Q ss_pred EccCCC---------------------------------------------EEEEEEecccC---------cEEEEEEcc
Q psy11036 173 DMLGGG---------------------------------------------KLLHKFTCHHK---------TVTSLCLAS 198 (239)
Q Consensus 173 d~~~~~---------------------------------------------~~~~~~~~h~~---------~v~~~~~s~ 198 (239)
++++.. ..-..++.|.. +|.+++|+|
T Consensus 182 nL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP 261 (347)
T KOG0647|consen 182 NLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP 261 (347)
T ss_pred EcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec
Confidence 553221 11223455552 578899999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
....|+|++.||+..+||-.....+++.+ ++.+|++.+|+
T Consensus 262 ~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn 302 (347)
T KOG0647|consen 262 VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFN 302 (347)
T ss_pred ccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEec
Confidence 99999999999999999998888888876 88899999886
No 64
>KOG0288|consensus
Probab=99.96 E-value=3.1e-28 Score=180.12 Aligned_cols=200 Identities=23% Similarity=0.297 Sum_probs=166.9
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.+.|+.+++|++++.+...++.+|. +.|+++.|.. ....+++|+.|.+++.||+....+..++-.
T Consensus 237 as~d~~~r~Wnvd~~r~~~TLsGHt--------------dkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~ 301 (459)
T KOG0288|consen 237 ASNDKNLRLWNVDSLRLRHTLSGHT--------------DKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLP 301 (459)
T ss_pred ecCCCceeeeeccchhhhhhhcccc--------------cceeeehhhc-cccceeeccccchhhhhhhhhhheeccccc
Confidence 4678999999999999999999999 9999999998 566699999999999999999888888766
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
.+.+..|..+ ...++++. |+.|++||.+ ...+...+..+. .|+++..++++..+++++.|.++.+.|++ .+...
T Consensus 302 ~S~cnDI~~~--~~~~~SgH~DkkvRfwD~R-s~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~ 377 (459)
T KOG0288|consen 302 GSQCNDIVCS--ISDVISGHFDKKVRFWDIR-SADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQ 377 (459)
T ss_pred cccccceEec--ceeeeecccccceEEEecc-CCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEE
Confidence 6777777776 55666776 8999999999 777888887654 89999999999999999999999999999 33333
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--C-CCCeeeeEec
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--Y-PSPVLSIDVS 238 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~-~~~v~~~~~s 238 (239)
.++.. . +. .....+.+.|||++.|+++||.||.|+||++.++++...+. + +..|++++|+
T Consensus 378 ~~sA~---------------g-~k-~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~ 440 (459)
T KOG0288|consen 378 TFSAE---------------G-FK-CASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWN 440 (459)
T ss_pred Eeecc---------------c-cc-cccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEc
Confidence 33110 0 01 12348889999999999999999999999999999998887 2 2369999998
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 441 ~ 441 (459)
T KOG0288|consen 441 P 441 (459)
T ss_pred C
Confidence 7
No 65
>KOG0646|consensus
Probab=99.96 E-value=1.1e-27 Score=179.66 Aligned_cols=218 Identities=20% Similarity=0.310 Sum_probs=177.0
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~ 85 (239)
...|.+|.+...........-. ++|.+++-+| .|.+|+.|+..|.+++|.+.+|..+..+ .|-.
T Consensus 60 rp~l~vw~i~k~~~~~q~~v~P--------------g~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ 124 (476)
T KOG0646|consen 60 RPLLHVWEILKKDQVVQYIVLP--------------GPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQ 124 (476)
T ss_pred CccccccccCchhhhhhhcccc--------------cceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHHHhhcc
Confidence 3466777765544333222222 8899999999 8999999889999999999999998887 7999
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccC--------CCeEEEEEeccCCceEEEEEcCCC--CEEEEEecCCeEEEEE
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLG--------GGKLLHKFTCHHKTVTSLCLASGG--KRLISASLDHHAKIYE 154 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~--------~~~~~~~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~i~d 154 (239)
.|+|+.|+-||.++++|+ ||.|.+|.+.. ..++++.+..|.-+|+++...+.| ..+++++.|.++++||
T Consensus 125 ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wd 204 (476)
T KOG0646|consen 125 SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWD 204 (476)
T ss_pred ceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEE
Confidence 999999999999999999 89999998741 346788899999999999987754 6899999999999999
Q ss_pred cc-cceEeee-------------------ec--ceeEEEEEccCC---------------CEEEEEEecccC--cEEEEE
Q psy11036 155 MT-LKTVSSF-------------------TG--GLDVCIWDMLGG---------------GKLLHKFTCHHK--TVTSLC 195 (239)
Q Consensus 155 ~~-~~~~~~~-------------------~~--~~~i~~~d~~~~---------------~~~~~~~~~h~~--~v~~~~ 195 (239)
+. +..+.++ .| .+.|.+.++... ......+.+|.+ +|+|++
T Consensus 205 lS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa 284 (476)
T KOG0646|consen 205 LSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA 284 (476)
T ss_pred eccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE
Confidence 98 6665554 22 233444343221 234556778888 999999
Q ss_pred EccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 196 LASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++-||.+|++|+.||+|+|||+.+.++++++. ..++|+.+.+.|
T Consensus 285 is~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 285 ISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred EecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence 99999999999999999999999999999999 889999998855
No 66
>KOG0308|consensus
Probab=99.96 E-value=1.8e-28 Score=190.60 Aligned_cols=202 Identities=20% Similarity=0.346 Sum_probs=173.4
Q ss_pred CCCCCCCEEEEeeCCCcc------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC
Q psy11036 2 SHDLPILIVALWDIPSEA------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP 75 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 75 (239)
-+.|+||.|++|+..... ....++.|. +.|..++... +++.|++++.|-+|++|+...+
T Consensus 41 fTgGRDg~i~~W~~~~d~~~~s~~~~asme~Hs--------------DWVNDiiL~~-~~~tlIS~SsDtTVK~W~~~~~ 105 (735)
T KOG0308|consen 41 FTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHS--------------DWVNDIILCG-NGKTLISASSDTTVKVWNAHKD 105 (735)
T ss_pred EecCCCceEEEeccccccCCcccchhhhhhhhH--------------hHHhhHHhhc-CCCceEEecCCceEEEeecccC
Confidence 356899999999985432 256778888 9999999998 7889999999999999999877
Q ss_pred --Cceeee-cCCCCEEEEEE-ecCCcEEEEeC-CCcEEEEEccCCC--eEE--------EEEe-ccCCceEEEEEcCCCC
Q psy11036 76 --DPVMSV-NHGSPVESVLC-LPSGGIFVTGG-GLDVCIWDMLGGG--KLL--------HKFT-CHHKTVTSLCLASGGK 139 (239)
Q Consensus 76 --~~~~~~-~~~~~v~~~~~-~~~~~~l~~~~-~~~i~~~d~~~~~--~~~--------~~~~-~~~~~i~~i~~~~~~~ 139 (239)
-+..++ .|..-|.|+++ .++...+++|+ |+.|.+||+. .+ +.+ ..+. ++..+|.+++.++.|.
T Consensus 106 ~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin-~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t 184 (735)
T KOG0308|consen 106 NTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDIN-TGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT 184 (735)
T ss_pred cchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEcc-CcchhhhhhccccccccCCCCCccceeeeecCCcce
Confidence 455666 59999999999 77888888888 9999999998 33 122 2223 7788999999999999
Q ss_pred EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 140 RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.+++|+..+.+++||.+ ..+.+..+++|...|..+..++||..++++|.||+|++||+..
T Consensus 185 ~ivsGgtek~lr~wDpr--------------------t~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq 244 (735)
T KOG0308|consen 185 IIVSGGTEKDLRLWDPR--------------------TCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ 244 (735)
T ss_pred EEEecCcccceEEeccc--------------------cccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc
Confidence 99999999999999988 4666777789999999999999999999999999999999999
Q ss_pred CeeeEEec-CCCCeeeeEecC
Q psy11036 220 FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 220 ~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+++.++. |...|+++.-+|
T Consensus 245 QrCl~T~~vH~e~VWaL~~~~ 265 (735)
T KOG0308|consen 245 QRCLATYIVHKEGVWALQSSP 265 (735)
T ss_pred cceeeeEEeccCceEEEeeCC
Confidence 99999998 888899988765
No 67
>KOG0283|consensus
Probab=99.96 E-value=5.9e-28 Score=192.42 Aligned_cols=181 Identities=21% Similarity=0.354 Sum_probs=149.6
Q ss_pred ceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEec-CCcEEEEeC-CCcEEEEE
Q psy11036 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP-SGGIFVTGG-GLDVCIWD 111 (239)
Q Consensus 34 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d 111 (239)
|+..+..|.+.|.++.|+. .++|++++.|.+||+|++...+++..|.|..-|+|++|+| |.+++++|+ |+.++||+
T Consensus 361 P~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWs 438 (712)
T KOG0283|consen 361 PFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWS 438 (712)
T ss_pred chhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEee
Confidence 4455556679999999996 6899999999999999999999999999999999999999 788999999 99999999
Q ss_pred ccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe-ee---------------------------
Q psy11036 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS-SF--------------------------- 163 (239)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~--------------------------- 163 (239)
+. ..+ +.....-..-|++++|.|||+..+.|+.+|.+++|+..+..+. ..
T Consensus 439 I~-d~~-Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~ 516 (712)
T KOG0283|consen 439 IS-DKK-VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDE 516 (712)
T ss_pred cC-cCe-eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCe
Confidence 96 444 4444445688999999999999999999999999998732221 11
Q ss_pred ----ecceeEEEEEccCCCEEEEEEecccC--cEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 164 ----TGGLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 164 ----~~~~~i~~~d~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+.+..|+|+|.+. ..++..++++.. .-....|+.||++|+++++|..|+||++..
T Consensus 517 vLVTSnDSrIRI~d~~~-~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 517 VLVTSNDSRIRIYDGRD-KDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred EEEecCCCceEEEeccc-hhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 2345599999865 567777776543 235678999999999999999999999844
No 68
>KOG0973|consensus
Probab=99.96 E-value=3.8e-27 Score=192.38 Aligned_cols=222 Identities=20% Similarity=0.262 Sum_probs=180.1
Q ss_pred CCCCC--CCCEEEEeeCCC------------cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCe
Q psy11036 1 MSHDL--PILIVALWDIPS------------EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKT 66 (239)
Q Consensus 1 fs~~~--~dg~i~vwd~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 66 (239)
|++.| .||.++||+.+. .+.+.+...|. +.|.|+.|+| ++.+||+|++|+.
T Consensus 28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~--------------~sv~CVR~S~-dG~~lAsGSDD~~ 92 (942)
T KOG0973|consen 28 FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHD--------------GSVNCVRFSP-DGSYLASGSDDRL 92 (942)
T ss_pred EecCCccccccceeeccccccchhhhhhcccchhheeecccc--------------CceeEEEECC-CCCeEeeccCcce
Confidence 34455 788888998743 12344555666 9999999999 8999999999999
Q ss_pred EEEEeCCC----------C--------Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC
Q psy11036 67 VNVYDTRS----------P--------DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH 126 (239)
Q Consensus 67 v~vw~~~~----------~--------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~ 126 (239)
|.+|.... + +.+..+ +|...|..++|+|++.++++++ |++|.+|+.+ +.+.+..+.+|.
T Consensus 93 v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~-tF~~~~vl~~H~ 171 (942)
T KOG0973|consen 93 VMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK-TFELLKVLRGHQ 171 (942)
T ss_pred EEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc-cceeeeeeeccc
Confidence 99999772 0 123344 6999999999999999999999 9999999999 779999999999
Q ss_pred CceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeee--------------------------------cceeEEEEE
Q psy11036 127 KTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFT--------------------------------GGLDVCIWD 173 (239)
Q Consensus 127 ~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~--------------------------------~~~~i~~~d 173 (239)
+.|..+.|.|-|++||+-+.|++|++|++. ......++ +...+.+.+
T Consensus 172 s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Iie 251 (942)
T KOG0973|consen 172 SLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIE 251 (942)
T ss_pred ccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEe
Confidence 999999999999999999999999999965 33333331 122255555
Q ss_pred ccCCCEEEEEEecccCcEEEEEEccC-----CC------------eEEEEcCCceEEEEEccCCeeeEEec--CCCCeee
Q psy11036 174 MLGGGKLLHKFTCHHKTVTSLCLASG-----GK------------RLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLS 234 (239)
Q Consensus 174 ~~~~~~~~~~~~~h~~~v~~~~~s~~-----~~------------~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~ 234 (239)
- .+...-..+-+|..++.+++|+|. .+ .+|+||.|++|.||.....+|+..+. ...+|.+
T Consensus 252 R-~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~D 330 (942)
T KOG0973|consen 252 R-GTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVD 330 (942)
T ss_pred c-CCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceee
Confidence 3 335556678899999999999982 22 57899999999999999999998887 6789999
Q ss_pred eEecC
Q psy11036 235 IDVSM 239 (239)
Q Consensus 235 ~~~sp 239 (239)
|+|+|
T Consensus 331 msWsp 335 (942)
T KOG0973|consen 331 MSWSP 335 (942)
T ss_pred eeEcC
Confidence 99997
No 69
>KOG0264|consensus
Probab=99.96 E-value=8.4e-28 Score=179.56 Aligned_cols=202 Identities=18% Similarity=0.223 Sum_probs=160.1
Q ss_pred CCCCEEEEeeCCCcc----------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 5 LPILIVALWDIPSEA----------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
...+.|+|||..+.. +-..+.+|. +.-+++.|+++..-.|++++.|++|++||+..
T Consensus 144 t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~--------------~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~ 209 (422)
T KOG0264|consen 144 TSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHE--------------KEGYGLSWNRQQEGTLLSGSDDHTICLWDINA 209 (422)
T ss_pred CCCCCEEEEEeccCCCcccccccCCCceEEEeec--------------ccccccccccccceeEeeccCCCcEEEEeccc
Confidence 456899999985422 122677887 66788999998888999999999999999964
Q ss_pred CCc-------eeee-cCCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccC-CCeEEEEEeccCCceEEEEEcC-CCCEEE
Q psy11036 75 PDP-------VMSV-NHGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLG-GGKLLHKFTCHHKTVTSLCLAS-GGKRLI 142 (239)
Q Consensus 75 ~~~-------~~~~-~~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~-~~~~~~~~~~~~~~i~~i~~~~-~~~~l~ 142 (239)
... ...+ .|...|..++|++. ...+++++ |+.+.|||+|. ..++.+...+|.++|.|++|+| ++..||
T Consensus 210 ~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilA 289 (422)
T KOG0264|consen 210 ESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILA 289 (422)
T ss_pred cccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEE
Confidence 432 2233 69999999999994 45566666 69999999995 4556677889999999999999 557899
Q ss_pred EEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCCe
Q psy11036 143 SASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 143 ~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
+|+.|++|.+||+| +-.+++..+.+|...|..+.|||+ ...||+++.|+.+.+||+..-.
T Consensus 290 T~S~D~tV~LwDlR-------------------nL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig 350 (422)
T KOG0264|consen 290 TGSADKTVALWDLR-------------------NLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIG 350 (422)
T ss_pred eccCCCcEEEeech-------------------hcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccc
Confidence 99999999999998 224577888999999999999995 5688999999999999996421
Q ss_pred --------------eeEEec-CCCCeeeeEecC
Q psy11036 222 --------------PVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 222 --------------~~~~~~-~~~~v~~~~~sp 239 (239)
++..-. |...|..++|+|
T Consensus 351 ~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp 383 (422)
T KOG0264|consen 351 EEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNP 383 (422)
T ss_pred cccChhhhccCCcceeEEecCcccccccccCCC
Confidence 122222 667899999987
No 70
>KOG0276|consensus
Probab=99.96 E-value=1e-27 Score=185.92 Aligned_cols=194 Identities=19% Similarity=0.289 Sum_probs=176.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
+.|.++.++| ....++++-.+|.|.|||.+++..++.+. ...||.+..|-+..+++++|+ |..|++|+.. +.+.++
T Consensus 14 dRVKsVd~HP-tePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn-t~ekV~ 91 (794)
T KOG0276|consen 14 DRVKSVDFHP-TEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN-TGEKVK 91 (794)
T ss_pred CceeeeecCC-CCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc-cceeeE
Confidence 8999999999 78899999999999999999999999984 678999999999999999999 6999999999 999999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc--cceEeeeec-----------------------ceeEEEEEcc
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT--LKTVSSFTG-----------------------GLDVCIWDML 175 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~-----------------------~~~i~~~d~~ 175 (239)
.+.+|..-|.+++.+|...++++++.|-+|++||.+ -.+.+++.| +..+++|.+.
T Consensus 92 ~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslg 171 (794)
T KOG0276|consen 92 TFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLG 171 (794)
T ss_pred EeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcC
Confidence 999999999999999999999999999999999998 344444432 4559999987
Q ss_pred CCCEEEEEEecccCcEEEEEEcc--CCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 176 GGGKLLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
. ..+..++++|...|.++.|-+ |..+|+||++|..|+|||..+..++++++ |...|..+.|+|
T Consensus 172 s-~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp 237 (794)
T KOG0276|consen 172 S-PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHP 237 (794)
T ss_pred C-CCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecC
Confidence 6 677889999999999999987 44699999999999999999999999999 888999999998
No 71
>KOG0305|consensus
Probab=99.96 E-value=1.6e-27 Score=184.93 Aligned_cols=197 Identities=22% Similarity=0.352 Sum_probs=173.2
Q ss_pred CCCEEEEeeCCCcceeeeeeC-CceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-e-c
Q psy11036 6 PILIVALWDIPSEAQVSTFTN-HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-V-N 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~-~ 82 (239)
.+|.|.|||..+.+.+..+.+ |. ..|-+++|. ...+.+|+.|+.|..+|++..+.... + .
T Consensus 237 ~~g~v~iwD~~~~k~~~~~~~~h~--------------~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~ 299 (484)
T KOG0305|consen 237 SDGTVQIWDVKEQKKTRTLRGSHA--------------SRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQG 299 (484)
T ss_pred cCCeEEEEehhhccccccccCCcC--------------ceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhc
Confidence 469999999999999999999 87 999999996 57999999999999999998776554 5 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEe--cCCeEEEEEcc-c
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISAS--LDHHAKIYEMT-L 157 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~--~d~~i~i~d~~-~ 157 (239)
|...|..++|++++.++++|+ |+.+.|||.. ..++...+..|...|..++|+| ....||+|+ .|+.|++||.. +
T Consensus 300 H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~-~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g 378 (484)
T KOG0305|consen 300 HRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL-SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTG 378 (484)
T ss_pred ccceeeeeEECCCCCeeccCCCccceEeccCC-CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCC
Confidence 999999999999999999999 8999999997 7788888999999999999999 557888865 69999999998 5
Q ss_pred ceEeee-----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 158 KTVSSF-----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 158 ~~~~~~-----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
..+..+ .+..+|.+|+..+ ...+..+.+|...|..++++|||..+++|+.|.++++
T Consensus 379 ~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps-~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrf 457 (484)
T KOG0305|consen 379 ARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS-MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRF 457 (484)
T ss_pred cEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc-cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEe
Confidence 555544 2344589999877 7788899999999999999999999999999999999
Q ss_pred EEccCCe
Q psy11036 215 YEMVNFS 221 (239)
Q Consensus 215 wd~~~~~ 221 (239)
|++-...
T Consensus 458 w~~f~~~ 464 (484)
T KOG0305|consen 458 WNLFDER 464 (484)
T ss_pred ccccCCC
Confidence 9997643
No 72
>KOG0267|consensus
Probab=99.96 E-value=4e-29 Score=196.20 Aligned_cols=199 Identities=25% Similarity=0.379 Sum_probs=179.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
|.|-.+-+|.+.....+..|.+|. .+|.++.|++ ...+|++|+.+|+|++||++..+.++++ +|
T Consensus 47 g~~~k~~L~~i~kp~~i~S~~~he--------------spIeSl~f~~-~E~LlaagsasgtiK~wDleeAk~vrtLtgh 111 (825)
T KOG0267|consen 47 GEDEKVNLWAIGKPNAITSLTGHE--------------SPIESLTFDT-SERLLAAGSASGTIKVWDLEEAKIVRTLTGH 111 (825)
T ss_pred CCceeeccccccCCchhheeeccC--------------CcceeeecCc-chhhhcccccCCceeeeehhhhhhhhhhhcc
Confidence 345566688877666667788898 9999999999 7889999999999999999999988888 89
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
...+..+.|+|-+.+.+.++ |..+++||++ ...+.+.+.+|...+..++|+|+|++++.++.|..++|||..
T Consensus 112 ~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R-k~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~------ 184 (825)
T KOG0267|consen 112 LLNITSVDFHPYGEFFASGSTDTDLKIWDIR-KKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT------ 184 (825)
T ss_pred ccCcceeeeccceEEeccccccccceehhhh-ccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc------
Confidence 99999999999999998888 8999999998 677888899999999999999999999999999999999987
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.++....|..|...+..+.|+|..-++++||.|+++++||+++.+.+.... ....|.+.+|+|
T Consensus 185 --------------agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~ 248 (825)
T KOG0267|consen 185 --------------AGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNP 248 (825)
T ss_pred --------------ccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecC
Confidence 466777779999999999999999999999999999999999999988887 566899999876
No 73
>KOG0274|consensus
Probab=99.96 E-value=4.2e-27 Score=188.27 Aligned_cols=198 Identities=27% Similarity=0.430 Sum_probs=175.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-C
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-H 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~ 83 (239)
+.|.++++||..+|++..++.+|. +.|.++...+ .++++|+.|.+|++|++.++..+..+. |
T Consensus 268 S~D~t~rvWd~~sg~C~~~l~gh~--------------stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h 330 (537)
T KOG0274|consen 268 STDKTERVWDCSTGECTHSLQGHT--------------SSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGH 330 (537)
T ss_pred ecCCcEEeEecCCCcEEEEecCCC--------------ceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccc
Confidence 358999999999999999999999 9999998854 688899999999999999999999996 9
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c-ceE
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L-KTV 160 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~ 160 (239)
..+|.++..+ +.++++|+ |+.|++||+. ..+.++.+.+|...|.++.+.+. ..+++|+.|+.|++||++ . +++
T Consensus 331 ~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~-~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~ 406 (537)
T KOG0274|consen 331 TGPVNCVQLD--EPLLVSGSYDGTVKVWDPR-TGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI 406 (537)
T ss_pred cccEEEEEec--CCEEEEEecCceEEEEEhh-hceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh
Confidence 9999999998 77888888 8999999999 99999999999999999988655 899999999999999999 5 576
Q ss_pred eee--------------------ecceeEEEEEccCCCEEEEEEec-ccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 161 SSF--------------------TGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 161 ~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
..+ ..++.|++||..+ ++++..+.+ |...|..+++. ...+++++.|+.+++||+++
T Consensus 407 ~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~~-~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 407 HTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAEE-GECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred hhhcCCcccccccccccceeEeccccccEEEeeccc-CceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEeccc
Confidence 666 2355699999887 788888888 67889988886 56788899999999999999
Q ss_pred CeeeEEe
Q psy11036 220 FSPVHTL 226 (239)
Q Consensus 220 ~~~~~~~ 226 (239)
+++.+.+
T Consensus 484 ~~~~~~l 490 (537)
T KOG0274|consen 484 GTLIRTL 490 (537)
T ss_pred Cchhhhh
Confidence 9888765
No 74
>KOG0296|consensus
Probab=99.96 E-value=1.2e-26 Score=169.39 Aligned_cols=172 Identities=19% Similarity=0.277 Sum_probs=155.8
Q ss_pred eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcE
Q psy11036 20 QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGI 98 (239)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 98 (239)
.+.+|..|+ +.|.+++.+| +.+++++|+.|..-.+|++.++.....+ +|+..|+++.|+.+|.+
T Consensus 56 S~~tF~~H~--------------~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshdgtl 120 (399)
T KOG0296|consen 56 SLVTFDKHT--------------DSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTL 120 (399)
T ss_pred ceeehhhcC--------------CceEEEEeCC-CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceE
Confidence 345677787 9999999999 8999999999999999999999977777 89999999999999999
Q ss_pred EEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCC
Q psy11036 99 FVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177 (239)
Q Consensus 99 l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~ 177 (239)
|++|+ +|.|++|+.. ++.....+...-..+.-+.|+|.+..|++|+.||.+-+|.+. .
T Consensus 121 LATGdmsG~v~v~~~s-tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip--------------------~ 179 (399)
T KOG0296|consen 121 LATGDMSGKVLVFKVS-TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP--------------------S 179 (399)
T ss_pred EEecCCCccEEEEEcc-cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC--------------------C
Confidence 99999 8999999998 666666665556778889999999999999999999999988 3
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+...+.+.+|..++++=.|.|+|+.++++..||+|++|+.++++++.++.
T Consensus 180 ~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 180 QALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred cceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 46677789999999999999999999999999999999999999999887
No 75
>KOG0643|consensus
Probab=99.96 E-value=1.3e-27 Score=167.91 Aligned_cols=199 Identities=19% Similarity=0.327 Sum_probs=162.8
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-----CCeEEEEeCC----
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-----DKTVNVYDTR---- 73 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----dg~v~vw~~~---- 73 (239)
+.+.|.+++|||+++|+++..++.. .+|..+.|++ ++++++.... .+.|.++|++
T Consensus 69 TGSAD~t~kLWDv~tGk~la~~k~~---------------~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~ 132 (327)
T KOG0643|consen 69 TGSADQTAKLWDVETGKQLATWKTN---------------SPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSS 132 (327)
T ss_pred eccccceeEEEEcCCCcEEEEeecC---------------CeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChh
Confidence 3467899999999999999999887 7899999999 7887776543 3689999998
Q ss_pred ---CCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 74 ---SPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 74 ---~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
..++...+ .+...++.+.|.|-++++++|. +|.|..||.++..+.+.....|...|+.++++|+..++++++.|.
T Consensus 133 ~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dt 212 (327)
T KOG0643|consen 133 DIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDT 212 (327)
T ss_pred hhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCc
Confidence 34455555 4678999999999999999999 799999999955677788889999999999999999999999999
Q ss_pred eEEEEEcc-cceEeeeecce-----------------------------------eEEEEEccCCCEEEEEEecccCcEE
Q psy11036 149 HAKIYEMT-LKTVSSFTGGL-----------------------------------DVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 149 ~i~i~d~~-~~~~~~~~~~~-----------------------------------~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
+-++||++ .+.+.++.... +.++|++.. .+.+..+++|-++|.
T Consensus 213 takl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~-eEEigrvkGHFGPIN 291 (327)
T KOG0643|consen 213 TAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIF-EEEIGRVKGHFGPIN 291 (327)
T ss_pred cceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHH-HHHhccccccccCcc
Confidence 99999998 66666662111 111222111 234556789999999
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+++|+|+|+..++|+.||.||+.-+.
T Consensus 292 svAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 292 SVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred eeEECCCCcccccCCCCceEEEEEec
Confidence 99999999999999999999998654
No 76
>KOG0294|consensus
Probab=99.96 E-value=1.9e-26 Score=165.54 Aligned_cols=198 Identities=21% Similarity=0.319 Sum_probs=164.2
Q ss_pred eeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCc--EEEEeC-CCcEEEE
Q psy11036 35 LMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGG--IFVTGG-GLDVCIW 110 (239)
Q Consensus 35 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~-~~~i~~~ 110 (239)
...+++|.+.|++++. ++.++++|+.|.+|+|||+++......+ .|.+.|+++.|.+.-. .|++++ ||.|.+|
T Consensus 36 lF~~~aH~~sitavAV---s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw 112 (362)
T KOG0294|consen 36 LFAFSAHAGSITALAV---SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIW 112 (362)
T ss_pred cccccccccceeEEEe---cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEE
Confidence 3444455599999999 4689999999999999999988877766 7999999999998764 677777 7999999
Q ss_pred EccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee--------------------------
Q psy11036 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF-------------------------- 163 (239)
Q Consensus 111 d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------------------------- 163 (239)
+.. ....+..+++|.+.|+.++.+|.+++-++.+.|+.+++||+- ++.-...
T Consensus 113 ~~~-~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i 191 (362)
T KOG0294|consen 113 RVG-SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKI 191 (362)
T ss_pred EcC-CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccEE
Confidence 998 789999999999999999999999999999999999999985 3211111
Q ss_pred --------------------------------ec--ceeEEEEEccCCCEEEEEEecccCcEEEEEE--ccCCCeEEEEc
Q psy11036 164 --------------------------------TG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL--ASGGKRLISAS 207 (239)
Q Consensus 164 --------------------------------~~--~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~s 207 (239)
+| +..+.+||... ..+...+.+|...|.++.+ .|++.+|+|+|
T Consensus 192 ~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaS 270 (362)
T KOG0294|consen 192 DIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDS-DTPLTEFLAHENRVKDIASYTNPEHEYLVTAS 270 (362)
T ss_pred EEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCC-CccceeeecchhheeeeEEEecCCceEEEEec
Confidence 12 23388888766 7888999999999999984 35678999999
Q ss_pred CCceEEEEEccCC-----eeeEEecCCCCeeeeEe
Q psy11036 208 LDHHAKIYEMVNF-----SPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 208 ~d~~i~iwd~~~~-----~~~~~~~~~~~v~~~~~ 237 (239)
.||.|+|||++.. +++..++....++|+..
T Consensus 271 SDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~ 305 (362)
T KOG0294|consen 271 SDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRV 305 (362)
T ss_pred cCceEEEEEccccccCCcceeEEeecCCccceeee
Confidence 9999999999765 57777777777777754
No 77
>KOG0306|consensus
Probab=99.96 E-value=2.5e-27 Score=187.05 Aligned_cols=178 Identities=21% Similarity=0.273 Sum_probs=157.9
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-----CCc--------eeeecCCCCEEEEEEecCCcEEEEeC-CC
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-----PDP--------VMSVNHGSPVESVLCLPSGGIFVTGG-GL 105 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-----~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~-~~ 105 (239)
+|.+.|.+++.+| ++..+++|+.|.+|++||..- +.. .+++..+..|.|+.++|++++++++- |.
T Consensus 452 AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdn 530 (888)
T KOG0306|consen 452 AHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDN 530 (888)
T ss_pred ccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccC
Confidence 4459999999999 899999999999999999641 111 13345678999999999999999998 99
Q ss_pred cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 106 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 106 ~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
++++|-++ +-+..-.+.+|.-||.|+..+||++.+++|+.|.+|++|-++ =+.+-.++-
T Consensus 531 TVkVyflD-tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd--------------------FGDCHKS~f 589 (888)
T KOG0306|consen 531 TVKVYFLD-TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD--------------------FGDCHKSFF 589 (888)
T ss_pred eEEEEEec-ceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc--------------------cchhhhhhh
Confidence 99999998 788888899999999999999999999999999999999988 244455568
Q ss_pred cccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 186 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+|...|.++.|-|....+++++.|+.|+-||-...+.++.+. |...|++++.+|
T Consensus 590 AHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~ 644 (888)
T KOG0306|consen 590 AHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSP 644 (888)
T ss_pred cccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcC
Confidence 999999999999999999999999999999999999999998 888999999876
No 78
>KOG0282|consensus
Probab=99.95 E-value=2.3e-28 Score=183.99 Aligned_cols=173 Identities=20% Similarity=0.361 Sum_probs=154.8
Q ss_pred ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeee-cCCCCEEEEEEecCC
Q psy11036 19 AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSV-NHGSPVESVLCLPSG 96 (239)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~-~~~~~v~~~~~~~~~ 96 (239)
+.+.++.+|+ ..|+++.|.|-.+.+|++++.|+.|+||++.. +.+++++ +|..+|.+++|+++|
T Consensus 205 k~~~~~~gH~--------------kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g 270 (503)
T KOG0282|consen 205 KLSHNLSGHT--------------KGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG 270 (503)
T ss_pred hheeeccCCc--------------cccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccC
Confidence 3456777787 99999999997789999999999999999976 7888888 799999999999999
Q ss_pred cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEc
Q psy11036 97 GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDM 174 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~ 174 (239)
..+++++ |+.+++||.+ +++.+..+. -...++++.|+|++ +.+++|+.|+.|+.||++
T Consensus 271 ~~fLS~sfD~~lKlwDtE-TG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR------------------ 330 (503)
T KOG0282|consen 271 TSFLSASFDRFLKLWDTE-TGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR------------------ 330 (503)
T ss_pred Ceeeeeecceeeeeeccc-cceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEecc------------------
Confidence 9999999 9999999999 899998887 45678999999988 889999999999999999
Q ss_pred cCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 175 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++.++++..|-++|..+.|-++|+.++++++|+.++||+.+...+++.+.
T Consensus 331 --s~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~ 381 (503)
T KOG0282|consen 331 --SGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIA 381 (503)
T ss_pred --chHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhc
Confidence 455566668899999999999999999999999999999999887776554
No 79
>KOG0264|consensus
Probab=99.95 E-value=8.2e-27 Score=174.31 Aligned_cols=193 Identities=25% Similarity=0.358 Sum_probs=157.3
Q ss_pred CCCCCCEEEEeeCCCcc-------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-
Q psy11036 3 HDLPILIVALWDIPSEA-------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS- 74 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~- 74 (239)
..+.|+.|++||+.... +...+.+|. +.|..++|++.+..++++++.|+.+.|||+++
T Consensus 195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~--------------~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~ 260 (422)
T KOG0264|consen 195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHE--------------DVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN 260 (422)
T ss_pred eccCCCcEEEEeccccccCCccccceEEeecCC--------------cceehhhccccchhhheeecCCCeEEEEEcCCC
Confidence 34678999999986432 345677887 99999999998889999999999999999995
Q ss_pred -CCceeee-cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCe
Q psy11036 75 -PDPVMSV-NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHH 149 (239)
Q Consensus 75 -~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~ 149 (239)
.++.... .|.+++.|++|+| ++..||+++ |++|.+||+|+-.++++++.+|...|.++.|+|.. ..|++++.|+.
T Consensus 261 ~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~r 340 (422)
T KOG0264|consen 261 TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRR 340 (422)
T ss_pred CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCc
Confidence 4444444 6899999999999 455667777 89999999998888999999999999999999955 68999999999
Q ss_pred EEEEEcc--cceEe-eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe-EEEEcCCceEEEEEcc
Q psy11036 150 AKIYEMT--LKTVS-SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYEMV 218 (239)
Q Consensus 150 i~i~d~~--~~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~d~~i~iwd~~ 218 (239)
+.+||+. ++... ... -....+++..-.||...|..+.|+|+..+ ++|.+.|+.+.||++.
T Consensus 341 l~vWDls~ig~eq~~eda---------~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 341 LNVWDLSRIGEEQSPEDA---------EDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred EEEEeccccccccChhhh---------ccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 9999998 32211 110 01134556777899999999999998765 6788999999999985
No 80
>KOG1539|consensus
Probab=99.95 E-value=3.4e-26 Score=182.37 Aligned_cols=136 Identities=24% Similarity=0.357 Sum_probs=118.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
.+.|.+.|||+++++.+.+++++. ..|+++.-+| -=..++.|..+|+|.++|++.++.+..+++.
T Consensus 179 s~~G~lql~Nvrt~K~v~~f~~~~--------------s~IT~ieqsP-aLDVVaiG~~~G~ViifNlK~dkil~sFk~d 243 (910)
T KOG1539|consen 179 SSQGRLQLWNVRTGKVVYTFQEFF--------------SRITAIEQSP-ALDVVAIGLENGTVIIFNLKFDKILMSFKQD 243 (910)
T ss_pred ecCCcEEEEEeccCcEEEEecccc--------------cceeEeccCC-cceEEEEeccCceEEEEEcccCcEEEEEEcc
Confidence 467999999999999999999998 9999999999 7889999999999999999999999999875
Q ss_pred -CCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEE-eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 85 -SPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 85 -~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
++|++++|.-||+.+.+.+ .|.+.+||++ ..+.+..+ ..|.+.|....|.|....+++.+.|+.+++|=.+
T Consensus 244 ~g~VtslSFrtDG~p~las~~~~G~m~~wDLe-~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD 318 (910)
T KOG1539|consen 244 WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLE-KKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFD 318 (910)
T ss_pred ccceeEEEeccCCCeeEEeccCCceEEEEEcC-CCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEee
Confidence 9999999999998776666 4999999998 55555444 4788888899998888889999989888877443
No 81
>KOG0640|consensus
Probab=99.95 E-value=5.9e-27 Score=168.14 Aligned_cols=187 Identities=22% Similarity=0.322 Sum_probs=156.3
Q ss_pred CCCCEEEEeeCCC------------c------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCe
Q psy11036 5 LPILIVALWDIPS------------E------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKT 66 (239)
Q Consensus 5 ~~dg~i~vwd~~~------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 66 (239)
+.|..|+|.|++. + -.++++..|. ++|+++.|+| ...+|++|+.|++
T Consensus 131 saD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~--------------devn~l~FHP-re~ILiS~srD~t 195 (430)
T KOG0640|consen 131 SADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHV--------------DEVNDLDFHP-RETILISGSRDNT 195 (430)
T ss_pred CCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhcc--------------Ccccceeecc-hhheEEeccCCCe
Confidence 4689999999861 1 2356667777 9999999999 8999999999999
Q ss_pred EEEEeCCCCCceee---ecCCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeEEEEE---eccCCceEEEEEcCCCC
Q psy11036 67 VNVYDTRSPDPVMS---VNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKF---TCHHKTVTSLCLASGGK 139 (239)
Q Consensus 67 v~vw~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~~~~~---~~~~~~i~~i~~~~~~~ 139 (239)
|+++|+......+. +....+|.++.|+|.|.++++|.+ ..+++||+. +.+..... ..|.+.|+++.+++.++
T Consensus 196 vKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~-T~QcfvsanPd~qht~ai~~V~Ys~t~~ 274 (430)
T KOG0640|consen 196 VKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVN-TYQCFVSANPDDQHTGAITQVRYSSTGS 274 (430)
T ss_pred EEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEecc-ceeEeeecCcccccccceeEEEecCCcc
Confidence 99999976544333 356789999999999999999997 889999998 66655443 35889999999999999
Q ss_pred EEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 140 RLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
..++++.||.|++||-- ++++.++. +.|. ..|.++.|..+++++++.+.|..+++|++
T Consensus 275 lYvTaSkDG~IklwDGVS~rCv~t~~--------------------~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 275 LYVTASKDGAIKLWDGVSNRCVRTIG--------------------NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred EEEEeccCCcEEeeccccHHHHHHHH--------------------hhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 99999999999999966 55555540 2344 46899999999999999999999999999
Q ss_pred cCCeeeEEec
Q psy11036 218 VNFSPVHTLD 227 (239)
Q Consensus 218 ~~~~~~~~~~ 227 (239)
.+++++..+.
T Consensus 335 ~t~R~l~~Yt 344 (430)
T KOG0640|consen 335 STGRMLKEYT 344 (430)
T ss_pred cCCceEEEEe
Confidence 9999998875
No 82
>KOG0292|consensus
Probab=99.95 E-value=1.3e-26 Score=186.10 Aligned_cols=195 Identities=21% Similarity=0.314 Sum_probs=171.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..|.+++|+| ....++++-.+|.|++||.+.+..+..+ +|.++|..++|+|...++++|+ |-.|++|+.. ..+.+.
T Consensus 10 sRvKglsFHP-~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk-~rrclf 87 (1202)
T KOG0292|consen 10 SRVKGLSFHP-KRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK-TRRCLF 87 (1202)
T ss_pred ccccceecCC-CCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc-cceehh
Confidence 7899999999 8899999999999999999999999999 7999999999999999999999 5889999999 889999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecc----------------------eeEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGG----------------------LDVCIWDMLGG 177 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~----------------------~~i~~~d~~~~ 177 (239)
++.+|..-|..+.|++.-.+++++|.|.+|+||+.. .+++..++|+ ..|++||+..-
T Consensus 88 tL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 88 TLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred hhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecch
Confidence 999999999999999999999999999999999999 8888888653 33999998421
Q ss_pred ----------------------------CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee--eEE-e
Q psy11036 178 ----------------------------GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP--VHT-L 226 (239)
Q Consensus 178 ----------------------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~--~~~-~ 226 (239)
.-..+.+.+|...|.-++|+|.-.++++|++|..|++|.+..-+. +.+ .
T Consensus 168 Rkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcr 247 (1202)
T KOG0292|consen 168 RKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCR 247 (1202)
T ss_pred hccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhh
Confidence 113456789999999999999999999999999999999854333 222 2
Q ss_pred cCCCCeeeeEecC
Q psy11036 227 DYPSPVLSIDVSM 239 (239)
Q Consensus 227 ~~~~~v~~~~~sp 239 (239)
.|..+|.++-|+|
T Consensus 248 gH~nnVssvlfhp 260 (1202)
T KOG0292|consen 248 GHYNNVSSVLFHP 260 (1202)
T ss_pred cccCCcceEEecC
Confidence 3888999999987
No 83
>KOG0278|consensus
Probab=99.95 E-value=1e-27 Score=167.14 Aligned_cols=217 Identities=18% Similarity=0.209 Sum_probs=189.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.||.=.+-+-++|.-+.+|.+|+ +.|.+..++. +....++++.|-+-++||.-++..+..+.|+.
T Consensus 37 kd~~pmlr~g~tgdwigtfeghk--------------gavw~~~l~~-na~~aasaaadftakvw~a~tgdelhsf~hkh 101 (334)
T KOG0278|consen 37 KDGKPMLRNGDTGDWIGTFEGHK--------------GAVWSATLNK-NATRAASAAADFTAKVWDAVTGDELHSFEHKH 101 (334)
T ss_pred cCCCchhccCCCCCcEEeeeccC--------------cceeeeecCc-hhhhhhhhcccchhhhhhhhhhhhhhhhhhhh
Confidence 34444555556777788999999 9999999998 78888999999999999999999999999999
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
-|.+++|+.+..+|++|+ +.-+++||++....+...+.+|.+.|..+.|....+.|++...|++|++||.+ +..++++
T Consensus 102 ivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL 181 (334)
T KOG0278|consen 102 IVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSL 181 (334)
T ss_pred eeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEE
Confidence 999999999999999999 78899999997778889999999999999999988999999999999999999 6666665
Q ss_pred --------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 164 --------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 164 --------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
.-+..|.+||..+ ..++..++. ...|.+.+++|+...+++|+.|..++.||..+++.+
T Consensus 182 ~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaks-f~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi 259 (334)
T KOG0278|consen 182 EFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKS-FGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEI 259 (334)
T ss_pred ecCCCCcceeeccCCCEEEEecCceeEEecccc-ccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCCcee
Confidence 2345589999876 555555554 456889999999999999999999999999999999
Q ss_pred EEec--CCCCeeeeEecC
Q psy11036 224 HTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 224 ~~~~--~~~~v~~~~~sp 239 (239)
..+. |.++|.++.|+|
T Consensus 260 ~~~nkgh~gpVhcVrFSP 277 (334)
T KOG0278|consen 260 GSYNKGHFGPVHCVRFSP 277 (334)
T ss_pred eecccCCCCceEEEEECC
Confidence 8863 899999999998
No 84
>KOG0300|consensus
Probab=99.95 E-value=1.2e-26 Score=167.24 Aligned_cols=199 Identities=24% Similarity=0.388 Sum_probs=173.2
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEe------CCCC--
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD------TRSP-- 75 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~------~~~~-- 75 (239)
.+.|.+-+||.+++++++.++.+|. +.|.+++|++ .+.++++++.|++..||. +...
T Consensus 166 ASADhTA~iWs~Esg~CL~~Y~GH~--------------GSVNsikfh~-s~~L~lTaSGD~taHIW~~av~~~vP~~~a 230 (481)
T KOG0300|consen 166 ASADHTARIWSLESGACLATYTGHT--------------GSVNSIKFHN-SGLLLLTASGDETAHIWKAAVNWEVPSNNA 230 (481)
T ss_pred cccccceeEEeeccccceeeecccc--------------cceeeEEecc-ccceEEEccCCcchHHHHHhhcCcCCCCCC
Confidence 4678899999999999999999999 9999999999 899999999999999996 1110
Q ss_pred --------------------------------Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEE
Q psy11036 76 --------------------------------DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 76 --------------------------------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~ 121 (239)
.++..+ +|.+.|.+..|...|+.+++++ |.+-.+||++ +++++..
T Consensus 231 ~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVE-tge~v~~ 309 (481)
T KOG0300|consen 231 PSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVE-TGEVVNI 309 (481)
T ss_pred CCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeec-cCceecc
Confidence 012223 5778888999999999999999 9999999999 9999999
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 201 (239)
+.+|....+.++-+|..+++++.+.|.+.++||++ ..-+.+..+++|...|+++.|..+.
T Consensus 310 LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR-------------------eaI~sV~VFQGHtdtVTS~vF~~dd- 369 (481)
T KOG0300|consen 310 LTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR-------------------EAIQSVAVFQGHTDTVTSVVFNTDD- 369 (481)
T ss_pred ccCcchhccccccCCcceEEEEeccCceeEeccch-------------------hhcceeeeecccccceeEEEEecCC-
Confidence 99999999999999999999999999999999998 1245567789999999999998765
Q ss_pred eEEEEcCCceEEEEEccCC-eeeEEecCCCCeeeeEec
Q psy11036 202 RLISASLDHHAKIYEMVNF-SPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~v~~~~~s 238 (239)
.+++||+|.+|++||+++. .++.++...++++-++.+
T Consensus 370 ~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs 407 (481)
T KOG0300|consen 370 RVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVS 407 (481)
T ss_pred ceeecCCCceEEEeeeccccCcceeeecCCccceeEee
Confidence 5889999999999999875 578899888888888765
No 85
>KOG0283|consensus
Probab=99.95 E-value=2.4e-26 Score=183.35 Aligned_cols=176 Identities=15% Similarity=0.253 Sum_probs=141.5
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC--------------------------------C------------
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS--------------------------------P------------ 75 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~--------------------------------~------------ 75 (239)
++++.|.++.|++ +|++||+|+.|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 3449999999999 899999999999999998654 0
Q ss_pred ----------------Cceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-C
Q psy11036 76 ----------------DPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-G 137 (239)
Q Consensus 76 ----------------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~ 137 (239)
+++..+ +|.+.|..+.|+.++-+|-++-|.+|++|++. ..+.+..|. |..-|+|++|+| |
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~-~~~CL~~F~-HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPG-RKECLKVFS-HNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCC-CcceeeEEe-cCCeeEEEEecccC
Confidence 011122 47788999999987655544449999999998 788888887 999999999999 7
Q ss_pred CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 138 GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 138 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.++|++|+.|+.++||++.. .+.+.- ..-..-|++++|+|||++.+.|+.+|.+++|+.
T Consensus 422 DryFiSGSLD~KvRiWsI~d--------------------~~Vv~W-~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t 480 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISD--------------------KKVVDW-NDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDT 480 (712)
T ss_pred CCcEeecccccceEEeecCc--------------------CeeEee-hhhhhhheeEEeccCCceEEEEEeccEEEEEEc
Confidence 79999999999999999982 222222 222367999999999999999999999999999
Q ss_pred cCCeeeEEec---C------CCCeeeeEecC
Q psy11036 218 VNFSPVHTLD---Y------PSPVLSIDVSM 239 (239)
Q Consensus 218 ~~~~~~~~~~---~------~~~v~~~~~sp 239 (239)
...+...... + ...|+.+.|.|
T Consensus 481 ~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p 511 (712)
T KOG0283|consen 481 EGLKLVSDFHIRLHNKKKKQGKRITGLQFFP 511 (712)
T ss_pred cCCeEEEeeeEeeccCccccCceeeeeEecC
Confidence 8877766553 1 23689888876
No 86
>KOG1407|consensus
Probab=99.95 E-value=6.8e-26 Score=158.85 Aligned_cols=198 Identities=15% Similarity=0.210 Sum_probs=170.6
Q ss_pred CCCCEEEEeeCCCcceee--eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPSEAQVS--TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+.|+++.+|+++..+... ..++|. +.|-.++|+|....++++++.|.+|++||++.+++.....
T Consensus 39 s~dktv~v~n~e~~r~~~~~~~~gh~--------------~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~ 104 (313)
T KOG1407|consen 39 SFDKTVSVWNLERDRFRKELVYRGHT--------------DSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIE 104 (313)
T ss_pred ccCCceEEEEecchhhhhhhcccCCC--------------cchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEee
Confidence 467999999998775544 456777 8899999999888999999999999999999999999987
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
..+.=.-+.|+|+|.++++++ |..|...|.+ ..+.....+ ....+..++|+.++..++....-|.|.|....
T Consensus 105 ~~~eni~i~wsp~g~~~~~~~kdD~it~id~r-~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyp----- 177 (313)
T KOG1407|consen 105 TKGENINITWSPDGEYIAVGNKDDRITFIDAR-TYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILSYP----- 177 (313)
T ss_pred ccCcceEEEEcCCCCEEEEecCcccEEEEEec-ccceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEecc-----
Confidence 666667889999999999999 8999999998 666555544 45567889999877877777777999988776
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
.-+++..+++|.....|+.|+|+|++||+|+.|..+.+||+...-+++.+. ++=||..++||
T Consensus 178 ---------------sLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS 240 (313)
T KOG1407|consen 178 ---------------SLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS 240 (313)
T ss_pred ---------------ccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEec
Confidence 567788889999999999999999999999999999999999998898887 77799999986
No 87
>KOG0289|consensus
Probab=99.95 E-value=8.2e-26 Score=168.46 Aligned_cols=199 Identities=22% Similarity=0.331 Sum_probs=168.5
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
.++.|..|+||.............|. ++|+.+..+| .+++|++++.|++..+.|++++.......
T Consensus 278 ~aSad~~i~vws~~~~s~~~~~~~h~--------------~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs 342 (506)
T KOG0289|consen 278 TASADEIIRVWSVPLSSEPTSSRPHE--------------EPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVS 342 (506)
T ss_pred ecCCcceEEeeccccccCcccccccc--------------ccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEe
Confidence 35678999999998888778888898 9999999999 89999999999999999999999887774
Q ss_pred CC---CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 83 HG---SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 83 ~~---~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
+. -.+++.+|+|||..+.+|. |+.+++||+. .......|.+|.++|..++|+.+|-+|++++.|+.|++||++ .
T Consensus 343 ~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk-s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl 421 (506)
T KOG0289|consen 343 DETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK-SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL 421 (506)
T ss_pred eccccceeEEeeEcCCceEEeccCCCceEEEEEcC-CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh
Confidence 43 4589999999999999998 8999999999 666889999999999999999999999999999999999998 4
Q ss_pred ceEeee---------------------ecceeEEEEEccC---CCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEE
Q psy11036 158 KTVSSF---------------------TGGLDVCIWDMLG---GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 158 ~~~~~~---------------------~~~~~i~~~d~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
+.+.++ .++.++++|-... ....+..+..|.+..+.+.|....++++++|.|..++
T Consensus 422 ~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~ 501 (506)
T KOG0289|consen 422 KNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILR 501 (506)
T ss_pred cccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheE
Confidence 433333 2344455554331 2445666777888899999999999999999999999
Q ss_pred EEEc
Q psy11036 214 IYEM 217 (239)
Q Consensus 214 iwd~ 217 (239)
++.+
T Consensus 502 ~~a~ 505 (506)
T KOG0289|consen 502 LYAL 505 (506)
T ss_pred Eeec
Confidence 8864
No 88
>KOG0308|consensus
Probab=99.95 E-value=3e-26 Score=178.32 Aligned_cols=182 Identities=24% Similarity=0.361 Sum_probs=162.1
Q ss_pred CCCCCCEEEEeeCCCc--ceeeeeeCCceeeccceeeccCCCCCeEEEEE-ecCCCCEEEEeeCCCeEEEEeCCCCCc--
Q psy11036 3 HDLPILIVALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV-SPVSSDIVISGSYDKTVNVYDTRSPDP-- 77 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg~v~vw~~~~~~~-- 77 (239)
..+.|-+|++|+...+ -++.++..|. +.|.|+++ .+ +..++++|+.|+.|.+||+.++..
T Consensus 90 S~SsDtTVK~W~~~~~~~~c~stir~H~--------------DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l 154 (735)
T KOG0308|consen 90 SASSDTTVKVWNAHKDNTFCMSTIRTHK--------------DYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATL 154 (735)
T ss_pred EecCCceEEEeecccCcchhHhhhhccc--------------chheeeeeccc-CceeEEecCCCccEEEEEccCcchhh
Confidence 4578999999999876 5778999999 99999999 55 889999999999999999997732
Q ss_pred eeee----------cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 78 VMSV----------NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 78 ~~~~----------~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
+..+ ++..+|.+++.++.|..+++|+ .+.+++||.+ ..+.+..+++|...|.++..++||+.+++++.
T Consensus 155 ~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDpr-t~~kimkLrGHTdNVr~ll~~dDGt~~ls~sS 233 (735)
T KOG0308|consen 155 VASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPR-TCKKIMKLRGHTDNVRVLLVNDDGTRLLSASS 233 (735)
T ss_pred hhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccc-cccceeeeeccccceEEEEEcCCCCeEeecCC
Confidence 2211 3677899999999998888888 7999999999 88888889999999999999999999999999
Q ss_pred CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 147 DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
||+|++||+. ..+++.++..|...|.++..+|+=..+.+|+.||.|..=|+++.
T Consensus 234 DgtIrlWdLg--------------------qQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 234 DGTIRLWDLG--------------------QQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CceEEeeecc--------------------ccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 9999999998 56777778999999999999999999999999999999999884
No 89
>KOG0306|consensus
Probab=99.95 E-value=1.1e-25 Score=177.74 Aligned_cols=198 Identities=21% Similarity=0.286 Sum_probs=173.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
|..+.|.+|+.++.++++++.. +.+.+..|.| +++++++|...|.+.++|+.+...+.+. .|
T Consensus 391 ga~~SikiWn~~t~kciRTi~~----------------~y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AH 453 (888)
T KOG0306|consen 391 GAGESIKIWNRDTLKCIRTITC----------------GYILASKFVP-GDRYIVLGTKNGELQVFDLASASLVETIRAH 453 (888)
T ss_pred cCCCcEEEEEccCcceeEEecc----------------ccEEEEEecC-CCceEEEeccCCceEEEEeehhhhhhhhhcc
Confidence 5568999999999999999875 4588999999 9999999999999999999998887777 69
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC----Ce--EEEEEe-----ccCCceEEEEEcCCCCEEEEEecCCeEE
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG----GK--LLHKFT-----CHHKTVTSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~----~~--~~~~~~-----~~~~~i~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
.+.+..++.+|++..+++++ |.+|++||.... +. ..-.+. .-...|.|++++|||++|+++--|++++
T Consensus 454 dgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVk 533 (888)
T KOG0306|consen 454 DGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVK 533 (888)
T ss_pred ccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEE
Confidence 99999999999999999999 899999997521 11 111111 2456899999999999999999999999
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPS 230 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~ 230 (239)
||-++ +-+...++-||.-||.++..|||++.++|||.|.+|+||-+.-|.+-+++- |+.
T Consensus 534 VyflD--------------------tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdD 593 (888)
T KOG0306|consen 534 VYFLD--------------------TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDD 593 (888)
T ss_pred EEEec--------------------ceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccC
Confidence 99888 566677788999999999999999999999999999999999999998887 999
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
.|.++.|-|
T Consensus 594 Svm~V~F~P 602 (888)
T KOG0306|consen 594 SVMSVQFLP 602 (888)
T ss_pred ceeEEEEcc
Confidence 999999987
No 90
>KOG1036|consensus
Probab=99.95 E-value=1.9e-25 Score=159.84 Aligned_cols=196 Identities=21% Similarity=0.316 Sum_probs=155.7
Q ss_pred cCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe
Q psy11036 39 STPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 39 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
.++++.|.++.|+| .++.|++++.||++++|++........+.|..++.+++|.++. .+++|+ ||.|+.+|+. ..
T Consensus 10 npP~d~IS~v~f~~-~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~-~~~~G~~dg~vr~~Dln--~~ 85 (323)
T KOG1036|consen 10 NPPEDGISSVKFSP-SSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADES-TIVTGGLDGQVRRYDLN--TG 85 (323)
T ss_pred CCChhceeeEEEcC-cCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCc-eEEEeccCceEEEEEec--CC
Confidence 34568999999998 6777777889999999999988777788999999999999854 555555 9999999997 33
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc-ce---------Eeee----------ecceeEEEEEccCC
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KT---------VSSF----------TGGLDVCIWDMLGG 177 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~-~~---------~~~~----------~~~~~i~~~d~~~~ 177 (239)
....+..|..+|.++..++....+++|+.|++|++||.+. .. +... +.+..+.+||+++-
T Consensus 86 ~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~ 165 (323)
T KOG1036|consen 86 NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNL 165 (323)
T ss_pred cceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCceEEEEEcccc
Confidence 4455677999999999999888999999999999999982 21 1111 33444777777543
Q ss_pred CE-----------------------------------------------EEEEEecccC---------cEEEEEEccCCC
Q psy11036 178 GK-----------------------------------------------LLHKFTCHHK---------TVTSLCLASGGK 201 (239)
Q Consensus 178 ~~-----------------------------------------------~~~~~~~h~~---------~v~~~~~s~~~~ 201 (239)
.. ....++.|.. +|.+++|+|-.+
T Consensus 166 ~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~ 245 (323)
T KOG1036|consen 166 DEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHG 245 (323)
T ss_pred cchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccc
Confidence 21 1122334432 689999999999
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
.|+||+.||.|.+||+.+.+.+..+. .+..|.+++|+
T Consensus 246 tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs 283 (323)
T KOG1036|consen 246 TFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFS 283 (323)
T ss_pred eEEecCCCceEEEccCcchhhhhhccCCCCceEEEEec
Confidence 99999999999999999999998887 66789999886
No 91
>KOG0772|consensus
Probab=99.95 E-value=4.2e-26 Score=173.39 Aligned_cols=176 Identities=18% Similarity=0.299 Sum_probs=142.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-eec------CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-SVN------HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~ 114 (239)
..++|.+|+|.+.+.+++++.||++|+||+.+.+... .+. ..-+++.++|+|+++.+|+|. ||.|.+|+...
T Consensus 269 a~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 269 AELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred eeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence 8899999999888999999999999999997654332 222 345789999999999999888 89999999753
Q ss_pred C--CeEEEEEeccCC--ceEEEEEcCCCCEEEEEecCCeEEEEEcc--cceEeeeecceeEEEEEccCCCEEEEEEec--
Q psy11036 115 G--GKLLHKFTCHHK--TVTSLCLASGGKRLISASLDHHAKIYEMT--LKTVSSFTGGLDVCIWDMLGGGKLLHKFTC-- 186 (239)
Q Consensus 115 ~--~~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-- 186 (239)
. ......-.+|.. .|++|+|+++|++|++-+.|+++++||++ .+++... .+
T Consensus 349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~---------------------tgL~ 407 (641)
T KOG0772|consen 349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR---------------------TGLP 407 (641)
T ss_pred cccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh---------------------cCCC
Confidence 2 223344457877 99999999999999999999999999998 3333333 22
Q ss_pred ccCcEEEEEEccCCCeEEEEcC------CceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 187 HHKTVTSLCLASGGKRLISASL------DHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
..-+-+.++|||+.+++++|.. .|.+.+||..+.+.++++. ....|..+.|||
T Consensus 408 t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whp 467 (641)
T KOG0772|consen 408 TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHP 467 (641)
T ss_pred ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecc
Confidence 1234567899999999999864 5789999999999999998 456899999998
No 92
>KOG0299|consensus
Probab=99.94 E-value=1.1e-25 Score=168.72 Aligned_cols=210 Identities=17% Similarity=0.195 Sum_probs=171.4
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.|.|..|.||+.++.+.++.+.+|. +.|.+++|-. +.+.|++++.|+.|++|++.....+.++
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~~ghr--------------~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~vetly 283 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVFKGHR--------------GAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVETLY 283 (479)
T ss_pred ecCCCceEEEecCcccchhhcccccc--------------cceeeeeeec-CccceeeeecCCceEEEehhHhHHHHHHh
Confidence 44678899999999999999999999 9999999998 8899999999999999999988887776
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
+|+..|.++....-++.+.+|+ |+++++|++. .+....+.++.+.+.|++|- +..++++|+.+|.|.+|++. .+.
T Consensus 284 GHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~--eesqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkp 360 (479)
T KOG0299|consen 284 GHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP--EESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKP 360 (479)
T ss_pred CCccceeeechhcccceEEeccccceeEEEecc--ccceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCc
Confidence 8999999999888888888887 9999999995 33444567888899999997 45789999999999999998 444
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC----eeeEEecCCCCeeee
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF----SPVHTLDYPSPVLSI 235 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~----~~~~~~~~~~~v~~~ 235 (239)
+.+. ....+-.+...-..+...|++++..|...++|+||.+|.|++|-+..+ .++..+...+-|+++
T Consensus 361 lf~~---------~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl 431 (479)
T KOG0299|consen 361 LFTS---------RLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSL 431 (479)
T ss_pred eeEe---------eccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEE
Confidence 3333 000000000000112348999999999999999999999999998776 677888889999999
Q ss_pred EecC
Q psy11036 236 DVSM 239 (239)
Q Consensus 236 ~~sp 239 (239)
+|++
T Consensus 432 ~f~~ 435 (479)
T KOG0299|consen 432 AFSN 435 (479)
T ss_pred EEcc
Confidence 9874
No 93
>KOG0640|consensus
Probab=99.94 E-value=3.2e-26 Score=164.36 Aligned_cols=198 Identities=20% Similarity=0.362 Sum_probs=167.8
Q ss_pred CCCCCCEEEEeeCCCcceee---eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 3 HDLPILIVALWDIPSEAQVS---TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
..++|++|+++|.......+ .|... .+|.++.|+| .|++|+.|..-.++++||+++-++..
T Consensus 189 S~srD~tvKlFDfsK~saKrA~K~~qd~---------------~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~Qcfv 252 (430)
T KOG0640|consen 189 SGSRDNTVKLFDFSKTSAKRAFKVFQDT---------------EPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFV 252 (430)
T ss_pred eccCCCeEEEEecccHHHHHHHHHhhcc---------------ceeeeEeecC-CCceEEEecCCCceeEEeccceeEee
Confidence 34689999999986543333 33333 7899999999 89999999999999999999988765
Q ss_pred ee----cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe-ccC-CceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 80 SV----NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT-CHH-KTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 80 ~~----~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~-~~~-~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
.- +|.+.|+++.+++.+++.++++ ||.|++||-- ..+.+.++. +|. ..|.+..|..+|+++++.+.|..+++
T Consensus 253 sanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGV-S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkL 331 (430)
T KOG0640|consen 253 SANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGV-SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKL 331 (430)
T ss_pred ecCcccccccceeEEEecCCccEEEEeccCCcEEeeccc-cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeee
Confidence 43 4889999999999999999999 9999999987 667776664 454 47999999999999999999999999
Q ss_pred EEcc-cceEeeeec----------------------------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE
Q psy11036 153 YEMT-LKTVSSFTG----------------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203 (239)
Q Consensus 153 ~d~~-~~~~~~~~~----------------------------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 203 (239)
|.+. ++++..++| ...++-||.++..+....-.+|.+++..+.-||.+.-+
T Consensus 332 WEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~F 411 (430)
T KOG0640|consen 332 WEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAF 411 (430)
T ss_pred eeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCce
Confidence 9999 899988855 23388899988766666667899999999999999999
Q ss_pred EEEcCCceEEEEEc
Q psy11036 204 ISASLDHHAKIYEM 217 (239)
Q Consensus 204 ~s~s~d~~i~iwd~ 217 (239)
.+||.|..+|+|--
T Consensus 412 mTcsdD~raRFWyr 425 (430)
T KOG0640|consen 412 MTCSDDFRARFWYR 425 (430)
T ss_pred eeecccceeeeeee
Confidence 99999999999954
No 94
>KOG4283|consensus
Probab=99.94 E-value=1.3e-25 Score=160.22 Aligned_cols=208 Identities=18% Similarity=0.253 Sum_probs=162.5
Q ss_pred CCCCCCEEEEeeCCCcce---eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 3 HDLPILIVALWDIPSEAQ---VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
..|.||.|.|||+++... ..-+..|..+ +...+...|+-.|.++.|-|.+...+.+++.|.+++|||..+.+...
T Consensus 61 SGgadgsi~v~Dl~n~t~~e~s~li~k~~c~--v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~ 138 (397)
T KOG4283|consen 61 SGGADGSIAVFDLQNATDYEASGLIAKHKCI--VAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAV 138 (397)
T ss_pred ecCCCccEEEEEeccccchhhccceeheeee--ccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeE
Confidence 457899999999975431 1111112111 12223344557899999999888899999999999999999999999
Q ss_pred eecCCCCEEEEEEecC---CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCE-EEEEecCCeEEEEE
Q psy11036 80 SVNHGSPVESVLCLPS---GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYE 154 (239)
Q Consensus 80 ~~~~~~~v~~~~~~~~---~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-l~~~~~d~~i~i~d 154 (239)
.+..++.|..-+++|- ..++++|. +-.|++.|+. .+...+.+.+|.+.|.++.|+|...+ |++|+.||.|++||
T Consensus 139 ~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~-SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWD 217 (397)
T KOG4283|consen 139 DFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA-SGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWD 217 (397)
T ss_pred EeecCceeehhhcChhhhcceEEEEecCCCcEEEEecc-CCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEE
Confidence 9999999999999993 33455555 6889999999 89999999999999999999997764 77899999999999
Q ss_pred cc--cceEeeeecceeEEEEEccCC-CEE-EEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 155 MT--LKTVSSFTGGLDVCIWDMLGG-GKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 155 ~~--~~~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
++ ..++..+ |..++ ..+ +..-..|.+.|..++|+.++.++++++.|..+++|+..+|+.
T Consensus 218 iRrasgcf~~l---------D~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 218 IRRASGCFRVL---------DQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred eecccceeEEe---------ecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence 99 3454444 33332 112 223457899999999999999999999999999999987754
No 95
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.94 E-value=1.1e-23 Score=160.60 Aligned_cols=215 Identities=13% Similarity=0.166 Sum_probs=163.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
+.++.|++||..+++....+..+. .+..++|+| +++.+ ++++.++.+++||+.+.+.+..+..
T Consensus 50 ~~~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~-~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~ 113 (300)
T TIGR03866 50 SDSDTIQVIDLATGEVIGTLPSGP---------------DPELFALHP-NGKILYIANEDDNLVTVIDIETRKVLAEIPV 113 (300)
T ss_pred CCCCeEEEEECCCCcEEEeccCCC---------------CccEEEECC-CCCEEEEEcCCCCeEEEEECCCCeEEeEeeC
Confidence 457899999999988877776653 356789999 56655 5556789999999998887777765
Q ss_pred CCCEEEEEEecCCcEEEEeC-C-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-G-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~~-~~~ 159 (239)
...+.+++|+|++..++++. + ..+.+||.+ ..+...... .......++|+|++++++++ ..++.|++||++ .+.
T Consensus 114 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~-~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 114 GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK-TYEIVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV 191 (300)
T ss_pred CCCcceEEECCCCCEEEEEecCCCeEEEEeCC-CCeEEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee
Confidence 56678999999999999887 4 457778987 555554443 23445789999999988654 469999999997 433
Q ss_pred Eeee------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEE-cC
Q psy11036 160 VSSF------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SL 208 (239)
Q Consensus 160 ~~~~------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~ 208 (239)
+..+ .+...+.+||..+ .+....+. +...+.+++|+|+|++|+++ +.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~ 269 (300)
T TIGR03866 192 IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT-YEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGV 269 (300)
T ss_pred eeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC-CcEEEEEE-eCCCcceEEECCCCCEEEEEcCC
Confidence 2211 1123488899875 44444332 34578999999999999876 46
Q ss_pred CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 209 DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
++.|++||+.+++++.+++.....++++++|
T Consensus 270 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 270 SNDVSVIDVAALKVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred CCeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence 8999999999999999999888889999987
No 96
>KOG0268|consensus
Probab=99.94 E-value=4.1e-26 Score=166.58 Aligned_cols=217 Identities=17% Similarity=0.246 Sum_probs=177.2
Q ss_pred CCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.+.+.||.|+|||+.+.++..++++|. +.|..|++.. +.+++++.|.+|+.|.++. .+..++
T Consensus 83 aSGs~DG~VkiWnlsqR~~~~~f~AH~--------------G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~-~p~~ti 144 (433)
T KOG0268|consen 83 ASGSCDGEVKIWNLSQRECIRTFKAHE--------------GLVRGICVTQ---TSFFTVGDDKTVKQWKIDG-PPLHTI 144 (433)
T ss_pred hccccCceEEEEehhhhhhhheeeccc--------------CceeeEEecc---cceEEecCCcceeeeeccC-Ccceee
Confidence 345779999999999999999999999 9999999975 6788999999999999875 477777
Q ss_pred cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
.....+..+..+..+..+++++ ..|.|||.. ...++..+.-....|.++.|+|.. ..|++++.|+.|.+||++ ...
T Consensus 145 lg~s~~~gIdh~~~~~~FaTcG-e~i~IWD~~-R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~P 222 (433)
T KOG0268|consen 145 LGKSVYLGIDHHRKNSVFATCG-EQIDIWDEQ-RDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASP 222 (433)
T ss_pred eccccccccccccccccccccC-ceeeecccc-cCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCc
Confidence 6677788888777666666655 358999998 778899998888899999999976 467777799999999999 555
Q ss_pred Eeee-------------------e--cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 160 VSSF-------------------T--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 160 ~~~~-------------------~--~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+..+ . .+.+++.+|++.-..++....+|.++|.++.|||.|+-+++||.|.+|+||...
T Consensus 223 l~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 223 LKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred cceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 4443 1 233488999999889999999999999999999999999999999999999987
Q ss_pred CCeeeEEec--CCCCeeeeEec
Q psy11036 219 NFSPVHTLD--YPSPVLSIDVS 238 (239)
Q Consensus 219 ~~~~~~~~~--~~~~v~~~~~s 238 (239)
.+..-..+. --..|.++.||
T Consensus 303 ~~~SRdiYhtkRMq~V~~Vk~S 324 (433)
T KOG0268|consen 303 HGHSRDIYHTKRMQHVFCVKYS 324 (433)
T ss_pred CCcchhhhhHhhhheeeEEEEe
Confidence 665433222 22356666665
No 97
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=1.5e-24 Score=173.16 Aligned_cols=180 Identities=17% Similarity=0.265 Sum_probs=142.5
Q ss_pred CCCCCEEEEeeCCCc-------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC
Q psy11036 4 DLPILIVALWDIPSE-------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD 76 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 76 (239)
.+.|+.|++||+.++ +++..+.+|. ..|.+++|+|.++++|++++.|++|++||+++++
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~--------------~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~ 159 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHT--------------KKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK 159 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCC--------------CcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe
Confidence 357899999999765 3466788888 9999999999556799999999999999999998
Q ss_pred ceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCc-eEEEEEcCCCCEEEEEe----cCCe
Q psy11036 77 PVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT-VTSLCLASGGKRLISAS----LDHH 149 (239)
Q Consensus 77 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~-i~~i~~~~~~~~l~~~~----~d~~ 149 (239)
....+ .|...|.+++|+|++.++++++ |+.|++||++ .++.+..+.+|.+. ...+.|.+++..+++++ .|+.
T Consensus 160 ~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~r-sg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~ 238 (493)
T PTZ00421 160 AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPR-DGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQ 238 (493)
T ss_pred EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECC-CCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCe
Confidence 88777 5889999999999999999998 8999999999 77788888888765 45678899888777655 4789
Q ss_pred EEEEEcc--cceEeee------------------------ecceeEEEEEccCCCEEEEEEe-cccCcEEEEEEccC
Q psy11036 150 AKIYEMT--LKTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASG 199 (239)
Q Consensus 150 i~i~d~~--~~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~~ 199 (239)
|++||++ ...+... .|++.|++||+.+. +++.... .+..++..++|.|.
T Consensus 239 VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~-~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 239 IMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE-RLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred EEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC-ceEEEeeccCCCCCcceEeccc
Confidence 9999997 2222111 13566999999874 4443333 34556788888884
No 98
>KOG0302|consensus
Probab=99.94 E-value=1.7e-25 Score=164.14 Aligned_cols=193 Identities=18% Similarity=0.292 Sum_probs=148.7
Q ss_pred CCCEEEEeeCCCcceeeeee-----CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-
Q psy11036 6 PILIVALWDIPSEAQVSTFT-----NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM- 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~- 79 (239)
..|.|+|||+... ++.+. .+. ....|++.+..++..=+.++|+|.....|++|..-+.|++|...++....
T Consensus 173 e~G~V~Vw~l~~~--l~~l~~~~~~~~~-s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd 249 (440)
T KOG0302|consen 173 ENGRVQVWDLAPH--LNALSEPGLEVKD-SEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVD 249 (440)
T ss_pred ccCcEEEEEchhh--hhhhcCccccccc-cccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeec
Confidence 4589999998432 11110 010 12234455555558999999999666678999888999999998876432
Q ss_pred ---eecCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCC-CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 80 ---SVNHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 80 ---~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
...|...|..++|+|.. ..|++++ ||+|+|||+|.. .+.....++|.+.|+.|.|+.+..+||+|+.||+++||
T Consensus 250 ~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iw 329 (440)
T KOG0302|consen 250 QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIW 329 (440)
T ss_pred CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEE
Confidence 22699999999999954 4666666 999999999954 23334458999999999999988899999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEcc
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~ 218 (239)
|++.- ..++++..++.|..+|+++.|+|. ...|++++.|.+|.|||+.
T Consensus 330 DLR~~-----------------~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 330 DLRQF-----------------KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred Ehhhc-----------------cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 99811 135788899999999999999994 5678888899999999985
No 99
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=1.7e-24 Score=173.98 Aligned_cols=181 Identities=14% Similarity=0.254 Sum_probs=140.4
Q ss_pred CCCCCEEEEeeCCCcc--------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC
Q psy11036 4 DLPILIVALWDIPSEA--------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP 75 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 75 (239)
.+.||.|+|||+.++. ++..+.+|. ..|.+++|+|.+..+|++++.|++|++||++++
T Consensus 93 gS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~--------------~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg 158 (568)
T PTZ00420 93 GSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK--------------KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENE 158 (568)
T ss_pred EeCCCeEEEEECCCCCccccccccceEEeecCC--------------CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCC
Confidence 4678999999997642 234567777 899999999954446789999999999999999
Q ss_pred CceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEE-----EEcCCCCEEEEEecCC-
Q psy11036 76 DPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSL-----CLASGGKRLISASLDH- 148 (239)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i-----~~~~~~~~l~~~~~d~- 148 (239)
+....+.+...|.+++|+|+|.+|++++ |+.|++||++ .++.+..+.+|.+.+... .|++++.+|++++.|+
T Consensus 159 ~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~R-sg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~ 237 (568)
T PTZ00420 159 KRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR-KQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN 237 (568)
T ss_pred cEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECC-CCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC
Confidence 8877777778899999999999999888 8999999999 788888899998765433 3458889999988774
Q ss_pred ---eEEEEEcc--cceEeee------------------------ecceeEEEEEccCCCE-EEEEEecccCcEEEEEEcc
Q psy11036 149 ---HAKIYEMT--LKTVSSF------------------------TGGLDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 149 ---~i~i~d~~--~~~~~~~------------------------~~~~~i~~~d~~~~~~-~~~~~~~h~~~v~~~~~s~ 198 (239)
.|+|||++ .+.+..+ .|+..|++|++..+.. .+..+ .+..++.+++|.|
T Consensus 238 ~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~-~s~~p~~g~~f~P 316 (568)
T PTZ00420 238 NMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEY-KSCSPFRSFGFLP 316 (568)
T ss_pred CccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeeccc-ccCCCccceEEcc
Confidence 79999998 3333221 3566799999876421 12222 2567788999999
Q ss_pred CC
Q psy11036 199 GG 200 (239)
Q Consensus 199 ~~ 200 (239)
..
T Consensus 317 kr 318 (568)
T PTZ00420 317 KQ 318 (568)
T ss_pred cc
Confidence 63
No 100
>KOG1332|consensus
Probab=99.94 E-value=1.3e-25 Score=156.03 Aligned_cols=206 Identities=22% Similarity=0.261 Sum_probs=162.1
Q ss_pred CCCCCCCEEEEeeCCCc---ceeeeeeCCceeeccceeeccCCCCCeEEEEEe-cCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 2 SHDLPILIVALWDIPSE---AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS-PVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
.+.++|++|+|+.+++. +++.++.+|. ++|..++|. |--+.+|+++++||.|.||.-.+++-
T Consensus 27 ATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~--------------GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w 92 (299)
T KOG1332|consen 27 ATCSSDGTVKIFEVRNNGQSKLLAELTGHS--------------GPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRW 92 (299)
T ss_pred eeecCCccEEEEEEcCCCCceeeeEecCCC--------------CCeeEEeecccccCcEeeEeecCceEEEEecCCCch
Confidence 46789999999999764 4678999999 999999996 43578999999999999999988865
Q ss_pred eeee---cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCC---C--------
Q psy11036 78 VMSV---NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASG---G-------- 138 (239)
Q Consensus 78 ~~~~---~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~---~-------- 138 (239)
.+.. .|...|++++|.|. |-.|++++ ||.|.+.+.+..+. .......|.-.|++++|.|. |
T Consensus 93 ~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~ 172 (299)
T KOG1332|consen 93 TKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPA 172 (299)
T ss_pred hhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcc
Confidence 4433 48899999999995 55677776 89999999875422 23445689999999999985 4
Q ss_pred ---CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC----CeEEEEcCCce
Q psy11036 139 ---KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG----KRLISASLDHH 211 (239)
Q Consensus 139 ---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~s~d~~ 211 (239)
+.|++|+.|+.|+||+... ..-.....+.+|...|+.++|.|.- ..||++|.||+
T Consensus 173 ~~~krlvSgGcDn~VkiW~~~~------------------~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~ 234 (299)
T KOG1332|consen 173 AKVKRLVSGGCDNLVKIWKFDS------------------DSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGT 234 (299)
T ss_pred cccceeeccCCccceeeeecCC------------------cchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCc
Confidence 5699999999999999871 1123444579999999999999963 47999999999
Q ss_pred EEEEEccCC-ee-eEEec--CCCCeeeeEecC
Q psy11036 212 AKIYEMVNF-SP-VHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 212 i~iwd~~~~-~~-~~~~~--~~~~v~~~~~sp 239 (239)
|.||..... ++ ..++. .+..+..++||+
T Consensus 235 viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~ 266 (299)
T KOG1332|consen 235 VIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSL 266 (299)
T ss_pred EEEEEecCccCcccccccccCCcceEEEEEec
Confidence 999977521 11 11221 567888888875
No 101
>KOG0293|consensus
Probab=99.94 E-value=1.6e-25 Score=166.12 Aligned_cols=196 Identities=18% Similarity=0.261 Sum_probs=158.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCC-ceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNH-TTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
|.+..+.+||+.+|.....+... . ..+.+++|.| ++..+++|+.|+++..||+.... .... +
T Consensus 288 g~~e~~~lwDv~tgd~~~~y~~~~~--------------~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDgn~-~~~W~g 351 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTGDLRHLYPSGLG--------------FSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDGNI-LGNWEG 351 (519)
T ss_pred CchHheeeccCCcchhhhhcccCcC--------------CCcceeEEcc-CCceeEecCCCCcEEEecCCcch-hhcccc
Confidence 55678999999999988777543 4 6799999999 89999999999999999997443 3333 1
Q ss_pred -CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
....|.+++..+||+++++.. |..|++|+.+ ...... +.....+|++++.+.+++++++.-.+..+++||++ ...
T Consensus 352 vr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e-~~~dr~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~l 429 (519)
T KOG0293|consen 352 VRDPKVHDLAITYDGKYVLLVTVDKKIRLYNRE-ARVDRG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKL 429 (519)
T ss_pred cccceeEEEEEcCCCcEEEEEecccceeeechh-hhhhhc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhH
Confidence 335699999999999988887 8999999987 333332 23356789999999999999999999999999997 332
Q ss_pred Eeee-----------------------ec--ceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEE
Q psy11036 160 VSSF-----------------------TG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAK 213 (239)
Q Consensus 160 ~~~~-----------------------~~--~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~ 213 (239)
+..+ +| +..|++|+-.+ ++++..+.||...|.+++|+| +-..+|++|+||+||
T Consensus 430 v~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s-gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 430 VRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS-GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred HHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccC-CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence 2222 22 34499999776 899999999999999999999 456789999999999
Q ss_pred EEEccC
Q psy11036 214 IYEMVN 219 (239)
Q Consensus 214 iwd~~~ 219 (239)
||....
T Consensus 509 IWg~~~ 514 (519)
T KOG0293|consen 509 IWGPSD 514 (519)
T ss_pred EecCCc
Confidence 997753
No 102
>KOG0639|consensus
Probab=99.94 E-value=1.5e-25 Score=170.20 Aligned_cols=220 Identities=19% Similarity=0.316 Sum_probs=175.5
Q ss_pred CCCCEEEEeeCCCc---ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDIPSE---AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
|..|.|+|||+... .++..+..-. ....|+++.+.| +++.|++|++-.++.|||+....+....
T Consensus 437 gGkgcVKVWdis~pg~k~PvsqLdcl~------------rdnyiRSckL~p-dgrtLivGGeastlsiWDLAapTprika 503 (705)
T KOG0639|consen 437 GGKGCVKVWDISQPGNKSPVSQLDCLN------------RDNYIRSCKLLP-DGRTLIVGGEASTLSIWDLAAPTPRIKA 503 (705)
T ss_pred cCCCeEEEeeccCCCCCCccccccccC------------cccceeeeEecC-CCceEEeccccceeeeeeccCCCcchhh
Confidence 55689999998542 2333333221 127899999999 8999999999999999999877654433
Q ss_pred c---CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-
Q psy11036 82 N---HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT- 156 (239)
Q Consensus 82 ~---~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~- 156 (239)
. ....+.+++.+||.+.++++. ||.|.|||+. +...++.+++|...+.||..+++|..|.+|+-|++|+.||++
T Consensus 504 eltssapaCyALa~spDakvcFsccsdGnI~vwDLh-nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlre 582 (705)
T KOG0639|consen 504 ELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLRE 582 (705)
T ss_pred hcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcc-cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhh
Confidence 2 234578899999999887776 8999999999 888999999999999999999999999999999999999998
Q ss_pred cceEeee-------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 157 LKTVSSF-------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 157 ~~~~~~~-------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
++.+... .|-.+-.+|=+.+.+.....+..|.+-|.++.|++.|+++++.+.|..+..|..
T Consensus 583 grqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrt 662 (705)
T KOG0639|consen 583 GRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 662 (705)
T ss_pred hhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccC
Confidence 4443322 111122333333445555667789999999999999999999999999999999
Q ss_pred cCCeeeEEecCCCCeeeeEec
Q psy11036 218 VNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 218 ~~~~~~~~~~~~~~v~~~~~s 238 (239)
.-|..+...+..++|.++++|
T Consensus 663 PyGasiFqskE~SsVlsCDIS 683 (705)
T KOG0639|consen 663 PYGASIFQSKESSSVLSCDIS 683 (705)
T ss_pred ccccceeeccccCcceeeeec
Confidence 999999999888999988775
No 103
>KOG1446|consensus
Probab=99.94 E-value=1.5e-23 Score=150.68 Aligned_cols=195 Identities=17% Similarity=0.257 Sum_probs=160.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~ 118 (239)
..|.++.|++ +|.++++++.|.++++||..+++.+.++ .++..+..++|......++.++ |.+|+..++. ..+.
T Consensus 15 ~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~-dNky 92 (311)
T KOG1446|consen 15 GKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH-DNKY 92 (311)
T ss_pred CceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee-cCce
Confidence 8899999999 8999999999999999999999999988 4667788888876655555554 7899999999 8899
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee--------------------ecceeEEEEEccCC
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF--------------------TGGLDVCIWDMLGG 177 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~--------------------~~~~~i~~~d~~~~ 177 (239)
++-+.+|...|.+++.+|-+..+++++.|++|++||++ .++...+ .+...|++||++.-
T Consensus 93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~ 172 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSF 172 (311)
T ss_pred EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999 4444333 34447999999864
Q ss_pred -CEEEEEEe---cccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCC---CeeeeEecC
Q psy11036 178 -GKLLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPS---PVLSIDVSM 239 (239)
Q Consensus 178 -~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~---~v~~~~~sp 239 (239)
..+...+. +.....+.+.|||||++|+.+...+.+++.|.-+|..+.++. ++. -.-+.+|+|
T Consensus 173 dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftP 242 (311)
T KOG1446|consen 173 DKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTP 242 (311)
T ss_pred CCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECC
Confidence 33444433 335678999999999999999999999999999999988887 222 124555655
No 104
>KOG0269|consensus
Probab=99.93 E-value=6.2e-26 Score=179.59 Aligned_cols=176 Identities=16% Similarity=0.265 Sum_probs=150.0
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCC---CCceeee-cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCCCe
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRS---PDPVMSV-NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~---~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
.+..++|.....++|++++..|.|.+||+.. .+.+..+ .|+..+.++.|++.. .+|++|+ ||.|++||++ ..+
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR-~~~ 167 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLR-SKK 167 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeee-ccc
Confidence 3456788876789999999999999999986 3444455 699999999999954 4666677 8999999999 777
Q ss_pred EEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 118 LLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
...++.+....|..++|+| .+..|+++...|.+++||++ ...++...+.+|.++|.++.|
T Consensus 168 S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR-------------------qp~r~~~k~~AH~GpV~c~nw 228 (839)
T KOG0269|consen 168 SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR-------------------QPDRCEKKLTAHNGPVLCLNW 228 (839)
T ss_pred ccccccccchhhhceeeccCCCceEEEecCCceEEEeecc-------------------CchhHHHHhhcccCceEEEee
Confidence 7777778888999999999 56889999999999999987 345667777899999999999
Q ss_pred ccCCCeEEEEcCCceEEEEEccCC--eeeEEecCCCCeeeeEecC
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNF--SPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~v~~~~~sp 239 (239)
+|++.+||||+.|+.|+|||+.+. +++.+++...+|..+.|-|
T Consensus 229 hPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP 273 (839)
T KOG0269|consen 229 HPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRP 273 (839)
T ss_pred cCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeecc
Confidence 999999999999999999999764 4577778888999999977
No 105
>KOG1274|consensus
Probab=99.93 E-value=4.6e-24 Score=171.88 Aligned_cols=215 Identities=16% Similarity=0.174 Sum_probs=170.1
Q ss_pred CCCCCCEEEEeeCCCc-ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 3 HDLPILIVALWDIPSE-AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
+.|+||.|++|+..+. +...++..+. ..|.+++.. .++|++|+.+++|.+|.+.+++.-..+
T Consensus 30 tcgsdg~ir~~~~~sd~e~P~ti~~~g--------------~~v~~ia~~---s~~f~~~s~~~tv~~y~fps~~~~~iL 92 (933)
T KOG1274|consen 30 TCGSDGDIRKWKTNSDEEEPETIDISG--------------ELVSSIACY---SNHFLTGSEQNTVLRYKFPSGEEDTIL 92 (933)
T ss_pred EecCCCceEEeecCCcccCCchhhccC--------------ceeEEEeec---ccceEEeeccceEEEeeCCCCCcccee
Confidence 4578999999987655 4444555455 778888874 469999999999999999998876555
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
+..-++.+++++.+|+++++|+ |-.|++.++. .......+.+|.++|.++.|+|++++||+.+.||.|++||+. +.
T Consensus 93 ~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~-D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~ 171 (933)
T KOG1274|consen 93 ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD-DSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGI 171 (933)
T ss_pred eeeeccceEEEEecCCcEEEeecCceeEEEEecc-ccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccch
Confidence 6788999999999999999999 5889999998 677788899999999999999999999999999999999998 44
Q ss_pred eEeee------------------------------ecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCCCeEEEE
Q psy11036 159 TVSSF------------------------------TGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISA 206 (239)
Q Consensus 159 ~~~~~------------------------------~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~ 206 (239)
...++ ..+..|.+|+..+ .+....+.. +...+.++.|+|+|+|||++
T Consensus 172 ~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs 250 (933)
T KOG1274|consen 172 LSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKYIAAS 250 (933)
T ss_pred hhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCC-ceeheeecccccccceEEEEEcCCCcEEeee
Confidence 43333 1234477777554 444444432 44559999999999999999
Q ss_pred cCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 207 SLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 207 s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
+.||.|.|||.++.+. -.....|.+++|.|
T Consensus 251 ~~~g~I~vWnv~t~~~---~~~~~~Vc~~aw~p 280 (933)
T KOG1274|consen 251 TLDGQILVWNVDTHER---HEFKRAVCCEAWKP 280 (933)
T ss_pred ccCCcEEEEecccchh---ccccceeEEEecCC
Confidence 9999999999987222 22445777777765
No 106
>KOG0313|consensus
Probab=99.93 E-value=1.7e-24 Score=158.93 Aligned_cols=163 Identities=19% Similarity=0.320 Sum_probs=140.8
Q ss_pred cceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEE
Q psy11036 33 VPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWD 111 (239)
Q Consensus 33 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d 111 (239)
.|...+..|.++|.++.|++ ...+++++.|.+|+.||+.++.....+..+..+.++..+|...++++|+ |..+++||
T Consensus 251 ~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~D 328 (423)
T KOG0313|consen 251 TPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWD 328 (423)
T ss_pred CceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecC
Confidence 34444445559999999997 6789999999999999999999999988889999999999999999998 89999999
Q ss_pred ccCCC--eEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 112 MLGGG--KLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 112 ~~~~~--~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
.+... -..+++.+|.+-|.++.|+|.. ..|++++.|+++++||++ ....++..+.+|.
T Consensus 329 PR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR-------------------S~k~plydI~~h~ 389 (423)
T KOG0313|consen 329 PRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR-------------------STKAPLYDIAGHN 389 (423)
T ss_pred CCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec-------------------cCCCcceeeccCC
Confidence 98543 3456788999999999999955 678999999999999988 3345778889999
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
..|.++.|+ ++..+++|+.|.+|+|+.-
T Consensus 390 DKvl~vdW~-~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 390 DKVLSVDWN-EGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred ceEEEEecc-CCceEEeccCcceEEEecc
Confidence 999999997 5778999999999999864
No 107
>KOG0772|consensus
Probab=99.93 E-value=5.6e-25 Score=167.36 Aligned_cols=208 Identities=18% Similarity=0.244 Sum_probs=150.2
Q ss_pred CCCCCCCCEEEEeeCCCcc----eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC
Q psy11036 1 MSHDLPILIVALWDIPSEA----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD 76 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 76 (239)
|.+.+-|..|++||..... .-+.+.... ...|.+++|++ .++.|++.+.....+|+|-...+
T Consensus 182 ~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E-------------~h~i~sl~ys~-Tg~~iLvvsg~aqakl~DRdG~~ 247 (641)
T KOG0772|consen 182 FVSGSLDYTVKFWDFQGMDASMRSFRQLQPCE-------------THQINSLQYSV-TGDQILVVSGSAQAKLLDRDGFE 247 (641)
T ss_pred eeeccccceEEEEecccccccchhhhccCccc-------------ccccceeeecC-CCCeEEEEecCcceeEEccCCce
Confidence 3455678999999986432 112222111 15699999999 67777666777889999965333
Q ss_pred ce---------eee----cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEEe-----ccCCceEEEEEcC
Q psy11036 77 PV---------MSV----NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKFT-----CHHKTVTSLCLAS 136 (239)
Q Consensus 77 ~~---------~~~----~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~i~~~~ 136 (239)
.. ..+ +|...++|.+|+|..+ .+++++ ||++++||+.......+.++ +..-+++.++|+|
T Consensus 248 ~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr 327 (641)
T KOG0772|consen 248 IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR 327 (641)
T ss_pred eeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC
Confidence 22 212 4778899999999543 444555 89999999986666555554 2344789999999
Q ss_pred CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC--cEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 137 GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 137 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
+|+.||+|+.||.|.+|+..... .......-.+|.. .|++++||+||++|++=+.|+++++
T Consensus 328 dg~~iAagc~DGSIQ~W~~~~~~-----------------v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 328 DGKLIAAGCLDGSIQIWDKGSRT-----------------VRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKV 390 (641)
T ss_pred CcchhhhcccCCceeeeecCCcc-----------------cccceEeeeccCCCCceeEEEeccccchhhhccCCCceee
Confidence 99999999999999999976111 1122233356766 8999999999999999999999999
Q ss_pred EEccCC-eeeEEec---CCCCeeeeEecC
Q psy11036 215 YEMVNF-SPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~-~~~~~~~---~~~~v~~~~~sp 239 (239)
||++.. +++.... ..-+-+.++|||
T Consensus 391 WDLrq~kkpL~~~tgL~t~~~~tdc~FSP 419 (641)
T KOG0772|consen 391 WDLRQFKKPLNVRTGLPTPFPGTDCCFSP 419 (641)
T ss_pred eeccccccchhhhcCCCccCCCCccccCC
Confidence 999875 4565544 344678888887
No 108
>KOG0641|consensus
Probab=99.93 E-value=2.2e-23 Score=143.98 Aligned_cols=196 Identities=18% Similarity=0.351 Sum_probs=156.7
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-----ee-cCCCCEEEEEEec----CCcEEEEeC--CCcE
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-----SV-NHGSPVESVLCLP----SGGIFVTGG--GLDV 107 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-----~~-~~~~~v~~~~~~~----~~~~l~~~~--~~~i 107 (239)
.+++.|.|.+|+| .++++++|+.|.+|++.-+....+.. .+ .|.+.|..++|-. .+..+++++ |..|
T Consensus 87 hhkgsiyc~~ws~-~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~i 165 (350)
T KOG0641|consen 87 HHKGSIYCTAWSP-CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKI 165 (350)
T ss_pred ccCccEEEEEecC-ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceE
Confidence 4569999999999 89999999999999998776443322 23 4889999999965 356777777 4556
Q ss_pred EEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee-----------------------
Q psy11036 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF----------------------- 163 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------- 163 (239)
.+-|-. .++.++.+.+|.+.|.++ ++=++..+++|+.|.+|++||++ ..++..+
T Consensus 166 y~tdc~-~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsg 243 (350)
T KOG0641|consen 166 YITDCG-RGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSG 243 (350)
T ss_pred EEeecC-CCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCc
Confidence 666776 788999999999999876 33368899999999999999999 7776665
Q ss_pred ----ec--ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC----eeeEE-ecCCCCe
Q psy11036 164 ----TG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF----SPVHT-LDYPSPV 232 (239)
Q Consensus 164 ----~~--~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~----~~~~~-~~~~~~v 232 (239)
+| +....+||++. +.+++.+..|...|.++.|+|...+|++++.|..|++-|+..- -++.. -+|...+
T Consensus 244 rll~sg~~dssc~lydirg-~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~ 322 (350)
T KOG0641|consen 244 RLLASGHADSSCMLYDIRG-GRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKA 322 (350)
T ss_pred ceeeeccCCCceEEEEeeC-CceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCce
Confidence 11 23367899986 8899999999999999999999999999999999999998531 12222 2377888
Q ss_pred eeeEecC
Q psy11036 233 LSIDVSM 239 (239)
Q Consensus 233 ~~~~~sp 239 (239)
..+.|+|
T Consensus 323 i~~rwh~ 329 (350)
T KOG0641|consen 323 IQCRWHP 329 (350)
T ss_pred EEEEecC
Confidence 8888876
No 109
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.93 E-value=1.2e-22 Score=154.94 Aligned_cols=220 Identities=16% Similarity=0.184 Sum_probs=163.4
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCcee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~ 79 (239)
|.+.+.|+.|++||+.+++.+..+..+. .+.+++|+| ++..+ ++++.++.|++||..+++...
T Consensus 4 ~~s~~~d~~v~~~d~~t~~~~~~~~~~~---------------~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~ 67 (300)
T TIGR03866 4 YVSNEKDNTISVIDTATLEVTRTFPVGQ---------------RPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIG 67 (300)
T ss_pred EEEecCCCEEEEEECCCCceEEEEECCC---------------CCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEE
Confidence 4466789999999999999888888763 467899999 66655 677789999999999988777
Q ss_pred eecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC-eEEEEEcc
Q psy11036 80 SVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH-HAKIYEMT 156 (239)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~-~i~i~d~~ 156 (239)
.+.....+..++++|+++.+++++ ++.+.+||++ ..+.+..+.. ...+.+++|+|+++.++++..++ .+.+||.+
T Consensus 68 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~-~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~ 145 (300)
T TIGR03866 68 TLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIE-TRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK 145 (300)
T ss_pred eccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECC-CCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCC
Confidence 664444567889999999876654 6899999998 5666666653 34468899999999999888765 46677876
Q ss_pred -cceEeee--------------------e--cceeEEEEEccCCCEEEEEEeccc-------CcEEEEEEccCCCeEEE-
Q psy11036 157 -LKTVSSF--------------------T--GGLDVCIWDMLGGGKLLHKFTCHH-------KTVTSLCLASGGKRLIS- 205 (239)
Q Consensus 157 -~~~~~~~--------------------~--~~~~i~~~d~~~~~~~~~~~~~h~-------~~v~~~~~s~~~~~l~s- 205 (239)
.+..... . .++.+.+||+.+ .+.+..+..+. .....++|+|++++++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~ 224 (300)
T TIGR03866 146 TYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT-RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVA 224 (300)
T ss_pred CCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc-ceeeeeeeecccccccccCCccceEECCCCCEEEEE
Confidence 3222111 1 245589999986 34444433221 12346889999998654
Q ss_pred EcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 206 ASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 206 ~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.+.++.+.+||+++++.+..+.....+.+++|+|
T Consensus 225 ~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 258 (300)
T TIGR03866 225 LGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTP 258 (300)
T ss_pred cCCCCeEEEEECCCCcEEEEEEeCCCcceEEECC
Confidence 4567789999999999887777677899999987
No 110
>KOG0268|consensus
Probab=99.93 E-value=2.1e-25 Score=162.93 Aligned_cols=181 Identities=19% Similarity=0.320 Sum_probs=148.2
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEE
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVE 88 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~ 88 (239)
.|.|||.....+++.+.-.. +.|.++.|+|....+|++++.|+.|.+||+++..++..+-..-..+
T Consensus 168 ~i~IWD~~R~~Pv~smswG~--------------Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN 233 (433)
T KOG0268|consen 168 QIDIWDEQRDNPVSSMSWGA--------------DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTN 233 (433)
T ss_pred eeeecccccCCccceeecCC--------------CceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeecccc
Confidence 35566655555555555554 8899999999878899999999999999999999998886677788
Q ss_pred EEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecc
Q psy11036 89 SVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGG 166 (239)
Q Consensus 89 ~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~ 166 (239)
.++|+|++-.++++. |..+..||++.-..++....+|.+.|.++.|+|.|+.+++|+.|.+|+||..+ +..
T Consensus 234 ~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S------- 306 (433)
T KOG0268|consen 234 TICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS------- 306 (433)
T ss_pred ceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc-------
Confidence 999999877777777 79999999998888999999999999999999999999999999999999988 111
Q ss_pred eeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 167 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 167 ~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
....++ .--+.|.++.||.|.+++++||+|+.|++|.....+.+
T Consensus 307 -----------RdiYht--kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 307 -----------RDIYHT--KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred -----------hhhhhH--hhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 000100 01245899999999999999999999999987654443
No 111
>KOG1408|consensus
Probab=99.93 E-value=1.9e-24 Score=170.44 Aligned_cols=196 Identities=20% Similarity=0.282 Sum_probs=163.3
Q ss_pred CCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEec---CCcEEEEeC-CCcEEEEEccCCC
Q psy11036 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLP---SGGIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~---~~~~l~~~~-~~~i~~~d~~~~~ 116 (239)
+-.+.+++.+| ++++|++|..-|+++||++.+.+....+ .|+..|.|+.|+. ..++|++++ |.-|++||.....
T Consensus 459 r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny 537 (1080)
T KOG1408|consen 459 RFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY 537 (1080)
T ss_pred ccceEEEEECC-CcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc
Confidence 35799999999 8999999999999999999988777777 6999999999985 356788888 8999999998778
Q ss_pred eEEEEEeccCCceEEEEEcCCC--CEEEEEecCCeEEE------------------------EEcc----cceEeeeecc
Q psy11036 117 KLLHKFTCHHKTVTSLCLASGG--KRLISASLDHHAKI------------------------YEMT----LKTVSSFTGG 166 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~i------------------------~d~~----~~~~~~~~~~ 166 (239)
.+++++.+|...|+++.|.-.| ..+++++.|..|.+ ||+. .+.+.+.+-+
T Consensus 538 ~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQD 617 (1080)
T KOG1408|consen 538 DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQD 617 (1080)
T ss_pred chhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecc
Confidence 8899999999999999998877 67899998876543 3332 1222233456
Q ss_pred eeEEEEEccCCCEEEEEEec---ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 167 LDVCIWDMLGGGKLLHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 167 ~~i~~~d~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+|++||+.+ ++..+.+++ |.+....+...|.|.||++.+.|+++.++|+.+|+++.++. |...|+.+.|.+
T Consensus 618 rnirif~i~s-gKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~n 693 (1080)
T KOG1408|consen 618 RNIRIFDIES-GKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLN 693 (1080)
T ss_pred cceEEEeccc-cceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecc
Confidence 6799999987 555566654 66778899999999999999999999999999999998887 888999999865
No 112
>KOG0301|consensus
Probab=99.92 E-value=7.2e-24 Score=166.20 Aligned_cols=188 Identities=24% Similarity=0.424 Sum_probs=163.5
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
-+.|+.|.+|......+..++++|+ ..|.++.... ++. +++||.|.++++|-... +...+ +
T Consensus 77 g~~D~~i~v~~~~~~~P~~~LkgH~--------------snVC~ls~~~-~~~-~iSgSWD~TakvW~~~~--l~~~l~g 138 (745)
T KOG0301|consen 77 GGMDTTIIVFKLSQAEPLYTLKGHK--------------SNVCSLSIGE-DGT-LISGSWDSTAKVWRIGE--LVYSLQG 138 (745)
T ss_pred ecccceEEEEecCCCCchhhhhccc--------------cceeeeecCC-cCc-eEecccccceEEecchh--hhcccCC
Confidence 4678999999999999999999999 9999998776 444 99999999999998643 33345 7
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
|+..|.+++.-|++ .+++|+ |.+|++|. .++.++++.+|...|..+++-+++ .|++++.||.|++|++.
T Consensus 139 H~asVWAv~~l~e~-~~vTgsaDKtIklWk---~~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~----- 208 (745)
T KOG0301|consen 139 HTASVWAVASLPEN-TYVTGSADKTIKLWK---GGTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLD----- 208 (745)
T ss_pred cchheeeeeecCCC-cEEeccCcceeeecc---CCchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEecc-----
Confidence 99999999999988 555555 99999998 477889999999999999998764 58899999999999987
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCC-CeeeeEe
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS-PVLSIDV 237 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-~v~~~~~ 237 (239)
++.+.++.+|+.-|.+++..++++.++++++|++++||+.. ++.+.+.+++ .++++.+
T Consensus 209 ----------------ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~ 267 (745)
T KOG0301|consen 209 ----------------GEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKV 267 (745)
T ss_pred ----------------CceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEE
Confidence 67777779999999999988899999999999999999875 8889999777 7877764
No 113
>KOG4378|consensus
Probab=99.92 E-value=1.2e-23 Score=159.64 Aligned_cols=200 Identities=16% Similarity=0.270 Sum_probs=166.1
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.|..+.|+|||++.....+.+++|. +.|+++.++. ...+|++++..|.|.|..+.++.....+.+
T Consensus 97 gG~~~~Vkiwdl~~kl~hr~lkdh~--------------stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~~tt~f~~ 161 (673)
T KOG4378|consen 97 GGQSGCVKIWDLRAKLIHRFLKDHQ--------------STVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQKTTTFTI 161 (673)
T ss_pred cCcCceeeehhhHHHHHhhhccCCc--------------ceeEEEEecC-CcceeEEeccCCcEEEEecccCccccceec
Confidence 4677999999999777788899999 9999999998 789999999999999999999988888854
Q ss_pred --CCCEEEEEEecCCcEEEE-eC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccc
Q psy11036 84 --GSPVESVLCLPSGGIFVT-GG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 84 --~~~v~~~~~~~~~~~l~~-~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~ 158 (239)
...|.-+.|+|..+.+++ ++ +|.|.+||+........-...|..+...|+|+| +..+|++.+.|..|.+||.+
T Consensus 162 ~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~-- 239 (673)
T KOG4378|consen 162 DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR-- 239 (673)
T ss_pred CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc--
Confidence 456678999997776554 44 599999999844455556678999999999999 45788999999999999988
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC-CeeeEEec-CCCCeeeeE
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN-FSPVHTLD-YPSPVLSID 236 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~-~~~~v~~~~ 236 (239)
.......+ ....+.+.++|+++|.+|+.|...|.|..||++. ..++..+. |...|++++
T Consensus 240 ------------------s~~s~~~l-~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~va 300 (673)
T KOG4378|consen 240 ------------------SQASTDRL-TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVA 300 (673)
T ss_pred ------------------ccccccee-eecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEE
Confidence 22222222 2367889999999999999999999999999975 56777776 888999999
Q ss_pred ecC
Q psy11036 237 VSM 239 (239)
Q Consensus 237 ~sp 239 (239)
|-|
T Consensus 301 fq~ 303 (673)
T KOG4378|consen 301 FQP 303 (673)
T ss_pred eee
Confidence 954
No 114
>KOG0973|consensus
Probab=99.92 E-value=1.7e-23 Score=171.33 Aligned_cols=176 Identities=20% Similarity=0.301 Sum_probs=150.0
Q ss_pred CCeEEEEEecCCCCEEEEee--CCCeEEEEeCCC------------CCceeee-cCCCCEEEEEEecCCcEEEEeC-CCc
Q psy11036 43 DYVRAGTVSPVSSDIVISGS--YDKTVNVYDTRS------------PDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~--~dg~v~vw~~~~------------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~ 106 (239)
..|.+++.+| ++..+++|+ .|+.+++|+... .+.+.++ .|.+.|.|+.|+|||++||+|+ |+.
T Consensus 14 ~~IfSIdv~p-dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~ 92 (942)
T KOG0973|consen 14 KSIFSIDVHP-DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL 92 (942)
T ss_pred eeEEEEEecC-CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence 6799999999 899999999 899999998642 1122333 5899999999999999999999 588
Q ss_pred EEEEEccC-----------------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeE
Q psy11036 107 VCIWDMLG-----------------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDV 169 (239)
Q Consensus 107 i~~~d~~~-----------------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i 169 (239)
|.+|.... ..+.+..+.+|.+.|..++|+|++.+|++++.|++|.||+.+
T Consensus 93 v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~------------- 159 (942)
T KOG0973|consen 93 VMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK------------- 159 (942)
T ss_pred EEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc-------------
Confidence 89998761 123567788999999999999999999999999999999988
Q ss_pred EEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-------CCCCeeeeEecC
Q psy11036 170 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-------YPSPVLSIDVSM 239 (239)
Q Consensus 170 ~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~sp 239 (239)
..+.+..+.+|.+.|..+.|.|-|+|||+-++|++|+||+..+....+.+. ......-++|||
T Consensus 160 -------tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSP 229 (942)
T KOG0973|consen 160 -------TFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSP 229 (942)
T ss_pred -------cceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCC
Confidence 457778889999999999999999999999999999999988777766664 234678888887
No 115
>KOG0270|consensus
Probab=99.92 E-value=2.3e-23 Score=155.70 Aligned_cols=190 Identities=22% Similarity=0.310 Sum_probs=150.4
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eeee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMSV 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-~~~~ 81 (239)
+.+.|.+|.+||+.++++..++..|. +.|.+++|+|..+..|++|+.|++|.+.|.+.... -..+
T Consensus 261 SgsaD~TV~lWD~~~g~p~~s~~~~~--------------k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w 326 (463)
T KOG0270|consen 261 SGSADKTVKLWDVDTGKPKSSITHHG--------------KKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW 326 (463)
T ss_pred ecCCCceEEEEEcCCCCcceehhhcC--------------CceeEEEecCCCceEEEeccccceEEeeeccCccccCceE
Confidence 45789999999999999999999998 99999999998899999999999999999985332 3344
Q ss_pred cCCCCEEEEEEecCCcE-EEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccc
Q psy11036 82 NHGSPVESVLCLPSGGI-FVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~-l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~ 158 (239)
...+.|..++|.|.... ++++. ||.++-+|+|..++++.++++|.++|.++++++.- .++++++.|+.|++|++...
T Consensus 327 k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 327 KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVD 406 (463)
T ss_pred EeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCC
Confidence 67889999999996554 44444 79999999998889999999999999999998854 57889999999999999811
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccCCeeeE
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~~~~ 224 (239)
....+..-.---+...|.++.|+-. +|+.|+..+.++|||+.+..++.
T Consensus 407 ------------------~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 407 ------------------SPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred ------------------CCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 1111110000112256677777654 56778888899999998876653
No 116
>KOG2919|consensus
Probab=99.91 E-value=2.4e-23 Score=150.33 Aligned_cols=208 Identities=18% Similarity=0.267 Sum_probs=157.7
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeC-CCCCcee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDT-RSPDPVM 79 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~-~~~~~~~ 79 (239)
|...+++.-|.+||.-+|+....+.+-..+-.. ....+++|+| ++.+|++| ....|+++|+ +.|.-..
T Consensus 126 ~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~---------taAhsL~Fs~-DGeqlfaG-ykrcirvFdt~RpGr~c~ 194 (406)
T KOG2919|consen 126 FAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEY---------TAAHSLQFSP-DGEQLFAG-YKRCIRVFDTSRPGRDCP 194 (406)
T ss_pred eeeccccCceeeeeccccccccchhhhhhHHhh---------hhheeEEecC-CCCeEeec-ccceEEEeeccCCCCCCc
Confidence 445678899999999999988887653211000 3456899999 78888865 5689999999 5553221
Q ss_pred ---ee-----cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CC
Q psy11036 80 ---SV-----NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH 148 (239)
Q Consensus 80 ---~~-----~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~ 148 (239)
++ +..+-+.+++|+|... .+++++ ...+-||.-. ...++..+.+|.+.|+.++|.++|+.|.+|.. |.
T Consensus 195 vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~-~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~d 273 (406)
T KOG2919|consen 195 VYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD-GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDD 273 (406)
T ss_pred chhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecC-CCCceeeecccCCCeeeEEeccCcCeecccccCCC
Confidence 22 2367789999999655 777777 5778888777 78888899999999999999999999999876 66
Q ss_pred eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC-cEEEE--EEccCCCeEEEEcCCceEEEEEccC-CeeeE
Q psy11036 149 HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSL--CLASGGKRLISASLDHHAKIYEMVN-FSPVH 224 (239)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~-~v~~~--~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~ 224 (239)
.|.+||++ ....++..+..|.. .-..+ ...|++++|++|+.||.|++||+++ +....
T Consensus 274 kIl~WDiR-------------------~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~s 334 (406)
T KOG2919|consen 274 KILCWDIR-------------------YSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVS 334 (406)
T ss_pred eEEEEeeh-------------------hccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccc
Confidence 77777776 33555555666655 33333 4468899999999999999999988 67566
Q ss_pred Eec-CCCCeeeeEecC
Q psy11036 225 TLD-YPSPVLSIDVSM 239 (239)
Q Consensus 225 ~~~-~~~~v~~~~~sp 239 (239)
.+. +...++.++++|
T Consensus 335 v~~~~sd~vNgvslnP 350 (406)
T KOG2919|consen 335 VTGNYSDTVNGVSLNP 350 (406)
T ss_pred ccccccccccceecCc
Confidence 655 778899999887
No 117
>KOG0646|consensus
Probab=99.91 E-value=3.8e-23 Score=155.41 Aligned_cols=204 Identities=20% Similarity=0.349 Sum_probs=166.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCCCCCcee-eecCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTRSPDPVM-SVNHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~~~~~-~~~~~ 84 (239)
...+.+||+++|....++++... ..-.++..- ++++++++. .-..+.+|.+....... ..-.+
T Consensus 17 ~~~~~~~dl~TGt~~~~ykg~~~-------------a~~~sl~~l--~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~P 81 (476)
T KOG0646|consen 17 PINCIVWDLRTGTSLLQYKGSYL-------------AQAASLTAL--NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLP 81 (476)
T ss_pred CcceeEEecCCCceeEEecCccc-------------ccchhhhhh--chhheeeecccCccccccccCchhhhhhhcccc
Confidence 46799999999999988887621 222233222 335555554 44578899987665544 33578
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
+++.+++-+|+|.+++.|+ .|.+++|.+. ++..+..+.+|-..|+++.|+.||.+|++|+.||.|.+|.+.
T Consensus 82 g~v~al~s~n~G~~l~ag~i~g~lYlWels-sG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~------- 153 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTISGNLYLWELS-SGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLT------- 153 (476)
T ss_pred cceeeeecCCCceEEEeecccCcEEEEEec-cccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEE-------
Confidence 9999999999999999997 7999999999 899999999999999999999999999999999999999986
Q ss_pred ecceeEEEEEc--cCCCEEEEEEecccCcEEEEEEccC--CCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 164 TGGLDVCIWDM--LGGGKLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 164 ~~~~~i~~~d~--~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.+.+. +...++.+.+..|.-+|+++...+. ..+|+|+|.|.++++||+..+..+.++..+.++.+++..|
T Consensus 154 ------~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDp 227 (476)
T KOG0646|consen 154 ------DLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDP 227 (476)
T ss_pred ------eecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcc
Confidence 11111 1146788899999999999988764 4689999999999999999999999999999999999877
No 118
>KOG0307|consensus
Probab=99.91 E-value=3.9e-24 Score=175.86 Aligned_cols=201 Identities=17% Similarity=0.219 Sum_probs=161.2
Q ss_pred CCCCEEEEeeCCC---c---ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 5 LPILIVALWDIPS---E---AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
+.||.|.+||... + ..+.+...|. +.|..+.|++..+++|++|+.||.|.|||+.+.+..
T Consensus 87 ~edG~I~ly~p~~~~~~~~~~~la~~~~h~--------------G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP 152 (1049)
T KOG0307|consen 87 LEDGNIVLYDPASIIANASEEVLATKSKHT--------------GPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETP 152 (1049)
T ss_pred ccCCceEEecchhhccCcchHHHhhhcccC--------------CceeeeeccccCCceeeccCCCCcEEEeccCCcCCC
Confidence 4689999999765 2 3455677788 999999999988889999999999999999886654
Q ss_pred eee---cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCCCeEEEEEeccCC--ceEEEEEcCCC-CEEEEEecCC--
Q psy11036 79 MSV---NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASGG-KRLISASLDH-- 148 (239)
Q Consensus 79 ~~~---~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~--~i~~i~~~~~~-~~l~~~~~d~-- 148 (239)
... ...+.|.+++|+..- +.|++++ +|...|||++ ..+++-.+..+.. .+..++|+|+. ..+++++.|.
T Consensus 153 ~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr-~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~ 231 (1049)
T KOG0307|consen 153 FTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR-KKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSA 231 (1049)
T ss_pred CCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc-CCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCC
Confidence 444 256789999999854 4556666 5899999999 5566656655444 57899999987 4566666654
Q ss_pred -eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 149 -HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 149 -~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
.|.+||+| ....+++.+++|...|.++.|++.+ .+|+|++.|++|.+|+..+++.+..+
T Consensus 232 PviqlWDlR-------------------~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~ 292 (1049)
T KOG0307|consen 232 PVIQLWDLR-------------------FASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGEL 292 (1049)
T ss_pred ceeEeeccc-------------------ccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeec
Confidence 45555554 5567778889999999999999955 89999999999999999999999999
Q ss_pred c-CCCCeeeeEecC
Q psy11036 227 D-YPSPVLSIDVSM 239 (239)
Q Consensus 227 ~-~~~~v~~~~~sp 239 (239)
. ....+..+.|+|
T Consensus 293 p~~~nW~fdv~w~p 306 (1049)
T KOG0307|consen 293 PAQGNWCFDVQWCP 306 (1049)
T ss_pred CCCCcceeeeeecC
Confidence 8 566899999987
No 119
>KOG0299|consensus
Probab=99.91 E-value=1.3e-22 Score=152.44 Aligned_cols=195 Identities=13% Similarity=0.213 Sum_probs=162.3
Q ss_pred CCCCEEEEeeCCCcceee-eeeC------Cceeeccceeec-cCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC
Q psy11036 5 LPILIVALWDIPSEAQVS-TFTN------HTTIYKVPLMLY-STPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~-~~~~------~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~ 76 (239)
+.+|+|.-|++.+++... .++. |.. +...- ..|...+.+++.++ ++.+|++|+.|..|.||+..+.+
T Consensus 161 sk~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~----~~k~~r~~h~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~e 235 (479)
T KOG0299|consen 161 SKDGTILKWDVLTGKKDRYIIERDEVLKSHGN----PLKESRKGHVKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLE 235 (479)
T ss_pred CCCcceeeeehhcCcccccccccchhhhhccC----CCCcccccccceeEEEEEcC-CCcEEEecCCCceEEEecCcccc
Confidence 567899999998887542 2222 221 11111 14558899999999 89999999999999999999999
Q ss_pred ceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 77 PVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 77 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
.+..+ .|.+.|.+++|-.....+++++ |+.+++|++. ....+.++.+|...|..|....-++.+.+|+.|.++++|+
T Consensus 236 hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~-~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwK 314 (479)
T KOG0299|consen 236 HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSID-QLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWK 314 (479)
T ss_pred hhhcccccccceeeeeeecCccceeeeecCCceEEEehh-HhHHHHHHhCCccceeeechhcccceEEeccccceeEEEe
Confidence 99998 7999999999998877788777 9999999998 7778888999999999999888888888888999999999
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+. .+....+.+|.+.+-|++|-. ...+++||.||.|.+|++.+.+++.+.+
T Consensus 315 i~---------------------eesqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~ 365 (479)
T KOG0299|consen 315 IP---------------------EESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSR 365 (479)
T ss_pred cc---------------------ccceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEee
Confidence 87 344445678888999999974 5679999999999999999999988775
No 120
>KOG0267|consensus
Probab=99.91 E-value=1.5e-24 Score=170.79 Aligned_cols=175 Identities=23% Similarity=0.374 Sum_probs=160.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..+.++..-. ..+.+++|+.|..+-+|.+.....+..+ .|..+|.++.|++...++++|. +|+|++||++ ..+.++
T Consensus 29 aav~~lk~~~-s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDle-eAk~vr 106 (825)
T KOG0267|consen 29 AAVGCLKIRK-SSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLE-EAKIVR 106 (825)
T ss_pred hhhceeeeec-cceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehh-hhhhhh
Confidence 7777887755 7889999999999999999887777776 7999999999999999998888 7999999999 888899
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
++.+|...+.++.|+|-+.+.+.|+.|+.+++||.+ ..-+.+.+.+|...|..+.|+|+|
T Consensus 107 tLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R--------------------k~Gc~~~~~s~~~vv~~l~lsP~G 166 (825)
T KOG0267|consen 107 TLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIR--------------------KKGCSHTYKSHTRVVDVLRLSPDG 166 (825)
T ss_pred hhhccccCcceeeeccceEEeccccccccceehhhh--------------------ccCceeeecCCcceeEEEeecCCC
Confidence 999999999999999999999999999999999998 455666678899999999999999
Q ss_pred CeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++++++++|..++|||+..|+.+..|+ |...+.++.|+|
T Consensus 167 r~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp 206 (825)
T KOG0267|consen 167 RWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHP 206 (825)
T ss_pred ceeeccCCcceeeeecccccccccccccccccccccccCc
Confidence 999999999999999999999999999 899999999987
No 121
>KOG0270|consensus
Probab=99.90 E-value=2e-22 Score=150.72 Aligned_cols=159 Identities=20% Similarity=0.275 Sum_probs=133.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
+.|..++|+..-.+.|++||.|.+|++||+.++++...+. |...|.++.|+|. ...+++|+ |+++.+.|.|.....-
T Consensus 244 davl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~ 323 (463)
T KOG0270|consen 244 DAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG 323 (463)
T ss_pred HHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccC
Confidence 7888999998777899999999999999999999999995 8899999999995 56777777 8999999999544333
Q ss_pred EEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 HKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
..++ ..+.|-.++|.|.. ..++++..||+++-+|+| ..++++.+++.|.++|.++++++
T Consensus 324 ~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R-------------------~~~~~vwt~~AHd~~ISgl~~n~ 383 (463)
T KOG0270|consen 324 KEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIR-------------------NPGKPVWTLKAHDDEISGLSVNI 383 (463)
T ss_pred ceEE-eccceEEEEecCCCceeEEEecCCceEEeeecC-------------------CCCCceeEEEeccCCcceEEecC
Confidence 3444 46789999999965 567788899999988887 34688888899999999999998
Q ss_pred C-CCeEEEEcCCceEEEEEccCCe
Q psy11036 199 G-GKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 199 ~-~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
. -.+|+|++.|+.|++|++..-.
T Consensus 384 ~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 384 QTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred CCCcceeeccccceEEEEeecCCC
Confidence 5 4578899999999999986433
No 122
>KOG0302|consensus
Probab=99.90 E-value=1.5e-22 Score=148.83 Aligned_cols=184 Identities=21% Similarity=0.333 Sum_probs=137.6
Q ss_pred CEEEEeeCCCcce---eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeee
Q psy11036 8 LIVALWDIPSEAQ---VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---VMSV 81 (239)
Q Consensus 8 g~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---~~~~ 81 (239)
+.|++|...++.- ...|.+|+ ..|..++|+|.....|++|+.||+|+|||++.+.. +.+-
T Consensus 234 ~~I~lw~~~~g~W~vd~~Pf~gH~--------------~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~k 299 (440)
T KOG0302|consen 234 KGIHLWEPSTGSWKVDQRPFTGHT--------------KSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTK 299 (440)
T ss_pred cceEeeeeccCceeecCccccccc--------------cchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEee
Confidence 6788888776542 23455676 99999999998888999999999999999998843 3333
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC--CCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEccc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG--GGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~--~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~ 157 (239)
.|.+.|+.+.|+....+|++|+ +|+++|||++. .++++..++.|..+|+++.|+|.. ..|++++.|.+|.+||+.-
T Consensus 300 Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 300 AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred ccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 6999999999999888899998 59999999983 357889999999999999999954 6788999999999999971
Q ss_pred ce----EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCce
Q psy11036 158 KT----VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHH 211 (239)
Q Consensus 158 ~~----~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~ 211 (239)
+. ........ +-|+ ..+++..-++ +..+..+.|++. ..+|++.+.||.
T Consensus 380 E~D~ee~~~~a~~~---L~dl--PpQLLFVHqG-Qke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 380 EADEEEIDQEAAEG---LQDL--PPQLLFVHQG-QKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred cCChhhhccccccc---hhcC--CceeEEEecc-hhHhhhheeccCCCCeEEEecccce
Confidence 11 00000000 0011 1233333223 567889999985 457888888884
No 123
>KOG0641|consensus
Probab=99.90 E-value=4.7e-21 Score=132.52 Aligned_cols=178 Identities=20% Similarity=0.306 Sum_probs=152.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec----
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---- 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---- 82 (239)
|-.|++-|-.+|+..+.+.+|. +-|.++.-- ++-.+++|+.|.+|++||++-..++.++.
T Consensus 162 dc~iy~tdc~~g~~~~a~sght--------------ghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~ 225 (350)
T KOG0641|consen 162 DCKIYITDCGRGQGFHALSGHT--------------GHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFH 225 (350)
T ss_pred cceEEEeecCCCCcceeecCCc--------------ccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCccc
Confidence 4567777777888888888888 888887432 57899999999999999999888888773
Q ss_pred ----CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 83 ----HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 83 ----~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
....|.+++..|.|+++++|. |....+||++ .+++++.+..|...|.++.|+|.-.++++++.|..|++-|+++
T Consensus 226 ~~glessavaav~vdpsgrll~sg~~dssc~lydir-g~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 226 DGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIR-GGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred CCCcccceeEEEEECCCcceeeeccCCCceEEEEee-CCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 235789999999999999998 7899999999 8999999999999999999999999999999999999999984
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
....+ -++.....|...+..+.|+|..-.+++.+.|.++.+|-+
T Consensus 305 dla~e----------------l~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 305 DLAHE----------------LPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred chhhc----------------CceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 33222 234445678888999999999989999999999999975
No 124
>KOG0301|consensus
Probab=99.90 E-value=3.1e-22 Score=157.18 Aligned_cols=192 Identities=19% Similarity=0.356 Sum_probs=162.1
Q ss_pred CCCCCCEEEEeeCCCcceee--eeeCCceeeccceeeccCCCCCeEE-EEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 3 HDLPILIVALWDIPSEAQVS--TFTNHTTIYKVPLMLYSTPQDYVRA-GTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
+.++||++++|+-..++.+. .+.+|. +.|.+ +++.+.++..+++|+.|+++.+|...+..+..
T Consensus 30 s~sRd~t~~vw~~~~~~~l~~~~~~~~~--------------g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~ 95 (745)
T KOG0301|consen 30 SGSRDGTVKVWAKKGKQYLETHAFEGPK--------------GFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLY 95 (745)
T ss_pred ecCCCCceeeeeccCcccccceecccCc--------------ceeeccceeccccCcceEeecccceEEEEecCCCCchh
Confidence 34679999999976555433 456665 77776 78876456679999999999999999999999
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
.+ +|+..|.+++...++. +++|+ |.++++|.. ++....+.+|...|.+++.-|++ .+++|+.|.+|++|.
T Consensus 96 ~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~---~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk--- 167 (745)
T KOG0301|consen 96 TLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI---GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWK--- 167 (745)
T ss_pred hhhccccceeeeecCCcCc-eEecccccceEEecc---hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeecc---
Confidence 88 7999999999888777 88888 999999985 56667799999999999999987 889999999999997
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeE
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSID 236 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~ 236 (239)
.++.+.++.+|..-|+.+++-+++ .+++++.||.|+.|++ +|+.+.++. |.+-+.+++
T Consensus 168 -------------------~~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis 226 (745)
T KOG0301|consen 168 -------------------GGTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSIS 226 (745)
T ss_pred -------------------CCchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEE
Confidence 467788889999999999998765 4789999999999999 677776665 888888887
Q ss_pred e
Q psy11036 237 V 237 (239)
Q Consensus 237 ~ 237 (239)
.
T Consensus 227 ~ 227 (745)
T KOG0301|consen 227 M 227 (745)
T ss_pred e
Confidence 3
No 125
>KOG0288|consensus
Probab=99.89 E-value=5.8e-23 Score=152.40 Aligned_cols=193 Identities=18% Similarity=0.263 Sum_probs=163.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--ceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~ 118 (239)
+.+..+.|-+ +...|++|+.|..|++|++...+ ...++ +..++++.+.|.++++.+++++ |+.+++|++. ..+.
T Consensus 176 gev~~v~~l~-~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd-~~r~ 253 (459)
T KOG0288|consen 176 GEVHDVEFLR-NSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVD-SLRL 253 (459)
T ss_pred cccceeEEcc-CcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeecc-chhh
Confidence 9999999999 78899999999999999997666 44455 5778999999999998888877 8999999998 8889
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee-----------------ecce--eEEEEEccCCC
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF-----------------TGGL--DVCIWDMLGGG 178 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-----------------~~~~--~i~~~d~~~~~ 178 (239)
.+++.+|.+.|+++.|......+++|+.|.+|++||+. ..+..++ +|+. .|++||++. .
T Consensus 254 ~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs-~ 332 (459)
T KOG0288|consen 254 RHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRS-A 332 (459)
T ss_pred hhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceEEEeccC-C
Confidence 99999999999999998776669999999999999998 5554443 3333 399999987 5
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-----CCCCeeeeEecC
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-----YPSPVLSIDVSM 239 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~~~~v~~~~~sp 239 (239)
.+..+...+ +.|+++..++++..|.+++.|.++.+.|+++.+....+. .....+.+.|||
T Consensus 333 ~~~~sv~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSp 397 (459)
T KOG0288|consen 333 DKTRSVPLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSP 397 (459)
T ss_pred ceeeEeecC-cceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECC
Confidence 556666664 489999999999999999999999999999998887775 334577888887
No 126
>KOG4283|consensus
Probab=99.89 E-value=2.9e-21 Score=138.17 Aligned_cols=201 Identities=17% Similarity=0.294 Sum_probs=162.3
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
|-+.+-|.+++|||..+.+....|+-. +.|++-+++|-. ..++++|..|-.|++.|+.+|...
T Consensus 117 FtssSFDhtlKVWDtnTlQ~a~~F~me---------------~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s 181 (397)
T KOG4283|consen 117 FTSSSFDHTLKVWDTNTLQEAVDFKME---------------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS 181 (397)
T ss_pred eecccccceEEEeecccceeeEEeecC---------------ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcce
Confidence 445567899999999999988888766 779999998853 347788888999999999999999
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEE--------------EeccCCceEEEEEcCCCCEE
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHK--------------FTCHHKTVTSLCLASGGKRL 141 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~--------------~~~~~~~i~~i~~~~~~~~l 141 (239)
..+ +|...|.++.|+|...++++.+ ||.|++||++.....+.. -.+|.+.+..++|..++.++
T Consensus 182 H~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l 261 (397)
T KOG4283|consen 182 HTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYL 261 (397)
T ss_pred eeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhh
Confidence 998 7999999999999887765544 899999999843222222 33677889999999999999
Q ss_pred EEEecCCeEEEEEcc-cc-eEeee--------------------------ecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 142 ISASLDHHAKIYEMT-LK-TVSSF--------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~-~~-~~~~~--------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
++++.|..+++|+.. ++ .+..+ ..++.+.++++-. +..+..+..|-..|.+
T Consensus 262 ~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~s-gs~ir~l~~h~k~i~c 340 (397)
T KOG4283|consen 262 ASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLE-GSFVRRLSTHLKRINC 340 (397)
T ss_pred hhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccC-ceEEEeeecccceeeE
Confidence 999999999999987 22 12211 1234466666654 6778888999889999
Q ss_pred EEEccCCCeEEEEcCCceEEEEEc
Q psy11036 194 LCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 194 ~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
..+.|+-+...++..|+.|..|-.
T Consensus 341 ~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 341 AAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred EeecCchhhhhccccCCccccccc
Confidence 999999999999999999999976
No 127
>KOG0290|consensus
Probab=99.89 E-value=6.8e-21 Score=135.92 Aligned_cols=195 Identities=17% Similarity=0.262 Sum_probs=151.3
Q ss_pred CCeEEEEEecCC----CCEEEEeeCCCeEEEEeCCCCCc----eeee------cCCCCEEEEEEec-CCcEEEEeC-CCc
Q psy11036 43 DYVRAGTVSPVS----SDIVISGSYDKTVNVYDTRSPDP----VMSV------NHGSPVESVLCLP-SGGIFVTGG-GLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~----~~~l~s~~~dg~v~vw~~~~~~~----~~~~------~~~~~v~~~~~~~-~~~~l~~~~-~~~ 106 (239)
-+++.+.|.|+. .++|++.+ ..+|+|.+...+. ...+ .+..++++..|+. +-+++.+++ |-+
T Consensus 97 YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTT 174 (364)
T KOG0290|consen 97 YPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTT 174 (364)
T ss_pred CCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCe
Confidence 789999999942 24666554 4799999874221 1111 2667899999987 455666666 899
Q ss_pred EEEEEccCC--CeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEccc----ceEee----------e------
Q psy11036 107 VCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTL----KTVSS----------F------ 163 (239)
Q Consensus 107 i~~~d~~~~--~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~----~~~~~----------~------ 163 (239)
..+||++.. +.....+-+|..+|..++|...+ +.||+.+.||.+++||++. ..+.+ +
T Consensus 175 CTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqD 254 (364)
T KOG0290|consen 175 CTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQD 254 (364)
T ss_pred EEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCC
Confidence 999999842 33466778899999999999866 5899999999999999982 11111 1
Q ss_pred --------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCC------eeeEEecC
Q psy11036 164 --------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNF------SPVHTLDY 228 (239)
Q Consensus 164 --------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~------~~~~~~~~ 228 (239)
..+..|.+.|++....++..+++|.+.|..++|.| ....|+|+++|..+.|||+.+. .++..+..
T Consensus 255 pnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a 334 (364)
T KOG0290|consen 255 PNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTA 334 (364)
T ss_pred chHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhc
Confidence 34666999999999999999999999999999999 4678999999999999999653 23445557
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
.+.|+.+.|+|
T Consensus 335 ~~EVNqi~Ws~ 345 (364)
T KOG0290|consen 335 GGEVNQIQWSS 345 (364)
T ss_pred cceeeeeeecc
Confidence 78899999985
No 128
>KOG2048|consensus
Probab=99.89 E-value=2.5e-20 Score=146.20 Aligned_cols=216 Identities=16% Similarity=0.253 Sum_probs=171.4
Q ss_pred CCCEEEEeeCCCcce-eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 6 PILIVALWDIPSEAQ-VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
.+|.|.+|++..+-. ...+.++.. ..|.+++|++ +..|++.+.+|.|.-||+.++++...+ ..
T Consensus 45 t~g~IEiwN~~~~w~~~~vi~g~~d-------------rsIE~L~W~e--~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~ 109 (691)
T KOG2048|consen 45 TDGNIEIWNLSNNWFLEPVIHGPED-------------RSIESLAWAE--GGRLFSSGLSGSITEWDLHTLKQKYNIDSN 109 (691)
T ss_pred cCCcEEEEccCCCceeeEEEecCCC-------------CceeeEEEcc--CCeEEeecCCceEEEEecccCceeEEecCC
Confidence 579999999987643 345666553 7899999995 567788889999999999999998888 57
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE--EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH--KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
.+.|.+++.+|.+..++.|+ ||.+..++.. .++... .+....+.|.+++|+|++..++.|+.||.|++||.. +..
T Consensus 110 gg~IWsiai~p~~~~l~IgcddGvl~~~s~~-p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t 188 (691)
T KOG2048|consen 110 GGAIWSIAINPENTILAIGCDDGVLYDFSIG-PDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQT 188 (691)
T ss_pred CcceeEEEeCCccceEEeecCCceEEEEecC-CceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCce
Confidence 78999999999999999997 6867777765 444332 233456899999999999999999999999999998 554
Q ss_pred Eeee---------------------------e--cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 160 VSSF---------------------------T--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 160 ~~~~---------------------------~--~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
+... + ..+.|.+||... +.++.....|...|.+++..+++..+++++.|+
T Consensus 189 ~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~-gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~ 267 (691)
T KOG2048|consen 189 LHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIF-GTLIQSHSCHDADVLALAVADNEDRVFSAGVDP 267 (691)
T ss_pred EEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccC-cchhhhhhhhhcceeEEEEcCCCCeEEEccCCC
Confidence 4411 2 234589999876 777888889999999999999999999999999
Q ss_pred eEEEEEccCCee-----eEEecCCCCeeeeEec
Q psy11036 211 HAKIYEMVNFSP-----VHTLDYPSPVLSIDVS 238 (239)
Q Consensus 211 ~i~iwd~~~~~~-----~~~~~~~~~v~~~~~s 238 (239)
.|.-|...+.+. ....-|...|.+++..
T Consensus 268 ~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~ 300 (691)
T KOG2048|consen 268 KIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVI 300 (691)
T ss_pred ceEEEEecCCccceeeeccccCCcccceeeeee
Confidence 999998876643 1111266677777753
No 129
>KOG2096|consensus
Probab=99.89 E-value=1.4e-21 Score=141.04 Aligned_cols=175 Identities=18% Similarity=0.271 Sum_probs=134.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-----eeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-----VMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~ 115 (239)
+.|++++|+. +|..|++++.|+.|++|+++.... ++.--.-+..+.+.|.||.+-+++.. ...+++|.+...
T Consensus 87 ~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~ 165 (420)
T KOG2096|consen 87 KEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKK 165 (420)
T ss_pred CceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeec
Confidence 9999999999 899999999999999999986432 11111223678899999988777665 578999987522
Q ss_pred Ce--E---------EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeee--------------------
Q psy11036 116 GK--L---------LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT-------------------- 164 (239)
Q Consensus 116 ~~--~---------~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------------------- 164 (239)
.. . .+.-+.|+-.+..+-....+.+|++++.|..|.+|+++++.+..+.
T Consensus 166 ~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~ 245 (420)
T KOG2096|consen 166 TDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAV 245 (420)
T ss_pred ccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCcEEEE
Confidence 11 0 1111235667777878778899999999999999999988777661
Q ss_pred -c-ceeEEEEEccCC-------CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 165 -G-GLDVCIWDMLGG-------GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 165 -~-~~~i~~~d~~~~-------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
| ..++.+|.+--+ -..+..+++|..+|..++|+++.+.++|.|.||+++|||..
T Consensus 246 ~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 246 SGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 1 234888886321 23456789999999999999999999999999999999974
No 130
>KOG1539|consensus
Probab=99.89 E-value=8.8e-22 Score=157.50 Aligned_cols=176 Identities=18% Similarity=0.319 Sum_probs=154.3
Q ss_pred CCCEEEEeeCCCcceeeee---eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 6 PILIVALWDIPSEAQVSTF---TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+.|.|-+||+.+|.....| +.|. ++|++++... -++.+++++.+|.+++||..+......+.
T Consensus 468 S~G~Id~fNmQSGi~r~sf~~~~ah~--------------~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~~k~l~~~l~ 532 (910)
T KOG1539|consen 468 SKGTIDRFNMQSGIHRKSFGDSPAHK--------------GEVTGLAVDG-TNRLLVSAGADGILKFWDFKKKVLKKSLR 532 (910)
T ss_pred cCCeEEEEEcccCeeecccccCcccc--------------CceeEEEecC-CCceEEEccCcceEEEEecCCcceeeeec
Confidence 4589999999999988888 4777 9999999987 67899999999999999999988888888
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
....+.++..+.....++.+. +-.|.++|.. +.+.++.+.+|.+.|++++|+|||++|++++.|++|++||+.
T Consensus 533 l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~-t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlp----- 606 (910)
T KOG1539|consen 533 LGSSITGIVYHRVSDLLAIALDDFSIRVVDVV-TRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLP----- 606 (910)
T ss_pred cCCCcceeeeeehhhhhhhhcCceeEEEEEch-hhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEecc-----
Confidence 888899999998877787777 6889999998 888999999999999999999999999999999999999998
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC-ceEEEEEcc
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-HHAKIYEMV 218 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~i~iwd~~ 218 (239)
.+.++..+.- ..+.+.+.|||+|.+|||...| .-|++|--.
T Consensus 607 ---------------t~~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 607 ---------------TGTLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred ---------------CcceeeeEec-CCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 3444444433 5678999999999999999988 569999643
No 131
>KOG0303|consensus
Probab=99.89 E-value=2.6e-21 Score=143.20 Aligned_cols=195 Identities=19% Similarity=0.288 Sum_probs=147.6
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------ceeee-cCCCCEEEEEEecCC-cEEEEeC-CCcEEE
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-------PVMSV-NHGSPVESVLCLPSG-GIFVTGG-GLDVCI 109 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~-~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~ 109 (239)
.|.++|..++|+|.+.+.|++|+.|.+|+||.+..+. ++..+ +|...|--++|+|.. +.|++++ |..|.+
T Consensus 79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i 158 (472)
T KOG0303|consen 79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI 158 (472)
T ss_pred CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence 3349999999999999999999999999999987543 34445 699999999999954 4455555 899999
Q ss_pred EEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee-------------------------
Q psy11036 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF------------------------- 163 (239)
Q Consensus 110 ~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~------------------------- 163 (239)
|++. +++.+.++. |...|.+++|+.+|.+|++.+.|..|+|||.+ ++.+...
T Consensus 159 Wnv~-tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfs 236 (472)
T KOG0303|consen 159 WNVG-TGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFS 236 (472)
T ss_pred Eecc-CCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccc
Confidence 9999 788777777 99999999999999999999999999999998 6555543
Q ss_pred -ecceeEEEEEccCCCEEEE--EEecccCcEEEEEEccCCCeE-EEEcCCceEEEEEccCCee----eEEecCCCCeeee
Q psy11036 164 -TGGLDVCIWDMLGGGKLLH--KFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMVNFSP----VHTLDYPSPVLSI 235 (239)
Q Consensus 164 -~~~~~i~~~d~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~i~iwd~~~~~~----~~~~~~~~~v~~~ 235 (239)
.+..++.+||..+-.+++. ++.. .+.|.---|.||...+ ++|-.|+.||.|++..-.+ +.++....+-..|
T Consensus 237 r~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~ 315 (472)
T KOG0303|consen 237 RMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGM 315 (472)
T ss_pred cccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCccccc
Confidence 1244588998876554433 3333 3456555677777766 4566899999999977653 3344444444444
Q ss_pred Ee
Q psy11036 236 DV 237 (239)
Q Consensus 236 ~~ 237 (239)
.|
T Consensus 316 g~ 317 (472)
T KOG0303|consen 316 GF 317 (472)
T ss_pred cc
Confidence 44
No 132
>KOG1034|consensus
Probab=99.89 E-value=3.8e-22 Score=144.32 Aligned_cols=199 Identities=17% Similarity=0.212 Sum_probs=158.9
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-- 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-- 81 (239)
.|..|.|+|.|+.+++....+.+|. ..|..+.++|...+++++++.|..||+||+++..++..+
T Consensus 111 ~G~~GvIrVid~~~~~~~~~~~ghG--------------~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG 176 (385)
T KOG1034|consen 111 GGYLGVIRVIDVVSGQCSKNYRGHG--------------GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGG 176 (385)
T ss_pred ecceeEEEEEecchhhhccceeccC--------------ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecc
Confidence 4667999999999999999999999 999999999988899999999999999999999999988
Q ss_pred --cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC--e-------------------------EEEEEeccCCceEE
Q psy11036 82 --NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG--K-------------------------LLHKFTCHHKTVTS 131 (239)
Q Consensus 82 --~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~--~-------------------------~~~~~~~~~~~i~~ 131 (239)
+|...|.++.|+++|.++++++ |..+++|++.... . ...+-..|...|.|
T Consensus 177 ~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDC 256 (385)
T KOG1034|consen 177 VEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDC 256 (385)
T ss_pred cccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHH
Confidence 4999999999999999999999 9999999996110 0 00122346777777
Q ss_pred EEEcCCCCEEEEEecCCeEEEEEc-c-cceE-------------eee------------------------ecceeEEEE
Q psy11036 132 LCLASGGKRLISASLDHHAKIYEM-T-LKTV-------------SSF------------------------TGGLDVCIW 172 (239)
Q Consensus 132 i~~~~~~~~l~~~~~d~~i~i~d~-~-~~~~-------------~~~------------------------~~~~~i~~~ 172 (239)
+.|- |+++++-+.++.|..|.. + .+.+ .++ ...+.+.+|
T Consensus 257 vrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vw 334 (385)
T KOG1034|consen 257 VRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVW 334 (385)
T ss_pred HHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEE
Confidence 7774 678999999999999987 2 2221 111 235569999
Q ss_pred EccCCCEEEE-EEec--ccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 173 DMLGGGKLLH-KFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 173 d~~~~~~~~~-~~~~--h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
|++....+.. ++.. ....|...+|+.|+.+|+..++|++|.-||..
T Consensus 335 dL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 335 DLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9987554322 2221 23568999999999999999999999999864
No 133
>KOG2445|consensus
Probab=99.89 E-value=8.6e-21 Score=136.27 Aligned_cols=220 Identities=16% Similarity=0.162 Sum_probs=154.7
Q ss_pred CCCCCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEec-CCCCEEEEeeCCCeEEEEeCCCC-
Q psy11036 2 SHDLPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP-VSSDIVISGSYDKTVNVYDTRSP- 75 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~v~vw~~~~~- 75 (239)
.+.++|++|.|||.++. .+....+.|. +.|..+.|.+ .-|+.+++++.|+++.||.-...
T Consensus 29 AtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~--------------~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~ 94 (361)
T KOG2445|consen 29 ATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD--------------GSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKS 94 (361)
T ss_pred eeccCCCcEEEEeccCCCCceEEeeeEEecC--------------CcEEEEEecCccccceEEEEecCCceeeeeecccc
Confidence 56788999999996433 4566778898 9999999974 34789999999999999985211
Q ss_pred ------C--ceeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccC-----------------------------
Q psy11036 76 ------D--PVMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG----------------------------- 114 (239)
Q Consensus 76 ------~--~~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~----------------------------- 114 (239)
+ ...++ .....|+.+.|.| -|-.+++++ ||.++||+...
T Consensus 95 ~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~C 174 (361)
T KOG2445|consen 95 EEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFC 174 (361)
T ss_pred cccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceE
Confidence 1 12233 4678899999998 466777777 89999997520
Q ss_pred ----------------------------------C---CeEEEEEeccCCceEEEEEcCCC----CEEEEEecCCeEEEE
Q psy11036 115 ----------------------------------G---GKLLHKFTCHHKTVTSLCLASGG----KRLISASLDHHAKIY 153 (239)
Q Consensus 115 ----------------------------------~---~~~~~~~~~~~~~i~~i~~~~~~----~~l~~~~~d~~i~i~ 153 (239)
. -..+.++.+|..+|++++|.|+- ..||+++.|| |+||
T Consensus 175 vsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~ 253 (361)
T KOG2445|consen 175 VSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIF 253 (361)
T ss_pred EeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEE
Confidence 0 01223345688899999999953 4789999999 9999
Q ss_pred Eccc--ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc---CCeeeEEecC
Q psy11036 154 EMTL--KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV---NFSPVHTLDY 228 (239)
Q Consensus 154 d~~~--~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~ 228 (239)
.++. ..+..-.-.......+ -.-+.+..+..|.+.|..+.|+-.|..|++.+.||.||+|... ..+++..++.
T Consensus 254 ~v~~~~s~i~~ee~~~~~~~~~--l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~ 331 (361)
T KOG2445|consen 254 KVKVARSAIEEEEVLAPDLMTD--LPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKA 331 (361)
T ss_pred EEeeccchhhhhcccCCCCccc--cceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEec
Confidence 9882 1111100000000111 1235566788999999999999999999999999999999763 3456666665
Q ss_pred CCCeeeeEec
Q psy11036 229 PSPVLSIDVS 238 (239)
Q Consensus 229 ~~~v~~~~~s 238 (239)
++.+....|+
T Consensus 332 e~~~~~~~~~ 341 (361)
T KOG2445|consen 332 EGSVTKPDFS 341 (361)
T ss_pred cCCCCCcccc
Confidence 5555554443
No 134
>KOG2096|consensus
Probab=99.89 E-value=1.9e-21 Score=140.48 Aligned_cols=181 Identities=17% Similarity=0.252 Sum_probs=137.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC-----
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG----- 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~----- 115 (239)
-.+..+-... ++.+|++++.|..|.+|+++ |+.+..+. ....-+..+.+|+|+++++++ .-.|++|.+--+
T Consensus 188 v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~f 265 (420)
T KOG2096|consen 188 VDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTF 265 (420)
T ss_pred cceEEEeecC-CceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcch
Confidence 3444444444 67899999999999999998 77777773 455567788999999999999 688999987421
Q ss_pred --CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE----EecccC
Q psy11036 116 --GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK----FTCHHK 189 (239)
Q Consensus 116 --~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~h~~ 189 (239)
-..+..+++|+..|..++|+++.+.+++.+.||+++|||++- -|....+...+.. +....+
T Consensus 266 qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV-------------rY~~~qDpk~Lk~g~~pl~aag~ 332 (420)
T KOG2096|consen 266 QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV-------------RYEAGQDPKILKEGSAPLHAAGS 332 (420)
T ss_pred hhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc-------------eEecCCCchHhhcCCcchhhcCC
Confidence 124567889999999999999999999999999999999870 0111111111111 122233
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
.-..++++|+|+.||.+. ...+++|..++|+.+..++ |...|.+++|+|
T Consensus 333 ~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~ 383 (420)
T KOG2096|consen 333 EPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSS 383 (420)
T ss_pred CceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecC
Confidence 344899999999988664 4579999999999998887 899999999986
No 135
>KOG0300|consensus
Probab=99.89 E-value=1.6e-21 Score=141.02 Aligned_cols=185 Identities=19% Similarity=0.299 Sum_probs=154.7
Q ss_pred eccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEE
Q psy11036 31 YKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVC 108 (239)
Q Consensus 31 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~ 108 (239)
+.+|+..+..+.+.|.+..|.. +++.+++++.|.+..+||+++++++..+ +|....+.++-+|..+++++++ |.+.+
T Consensus 261 iRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFR 339 (481)
T KOG0300|consen 261 IRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFR 339 (481)
T ss_pred eeeeeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeE
Confidence 3445555555559999999999 9999999999999999999999999988 8999999999999999999888 89999
Q ss_pred EEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
+||.+..-+.+..|++|...|++..|..+ ..+++|+.|.+|++||++ +-..++..+.. .
T Consensus 340 LWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLr-------------------NMRsplATIRt-d 398 (481)
T KOG0300|consen 340 LWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLR-------------------NMRSPLATIRT-D 398 (481)
T ss_pred eccchhhcceeeeecccccceeEEEEecC-CceeecCCCceEEEeeec-------------------cccCcceeeec-C
Confidence 99999777888999999999999999865 568999999999999998 11334444443 5
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec------CCCCeeeeEec
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD------YPSPVLSIDVS 238 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~~~~v~~~~~s 238 (239)
.++..++.+..+..++.--++..|++||+ +|..+..++ |..-|.+++|.
T Consensus 399 S~~NRvavs~g~~iIAiPhDNRqvRlfDl-nG~RlaRlPrtsRqgHrRMV~c~AW~ 453 (481)
T KOG0300|consen 399 SPANRVAVSKGHPIIAIPHDNRQVRLFDL-NGNRLARLPRTSRQGHRRMVTCCAWL 453 (481)
T ss_pred CccceeEeecCCceEEeccCCceEEEEec-CCCccccCCcccccccceeeeeeecc
Confidence 77888999988889998888999999999 455555443 56678888885
No 136
>KOG0321|consensus
Probab=99.89 E-value=9.6e-22 Score=153.20 Aligned_cols=219 Identities=20% Similarity=0.251 Sum_probs=157.8
Q ss_pred CCCEEEEeeCCCcce------eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 6 PILIVALWDIPSEAQ------VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
.+|.|.++|...... +..+..|. ..|..+.|-| +..+|++++.|.++++||+++.+.+.
T Consensus 72 E~G~i~l~dt~~~~fr~ee~~lk~~~aH~--------------nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G 136 (720)
T KOG0321|consen 72 EDGGIILFDTKSIVFRLEERQLKKPLAHK--------------NAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVG 136 (720)
T ss_pred CCCceeeecchhhhcchhhhhhccccccc--------------ceeEeeccCC-CceeEEEccCCceeeeeeeccceeec
Confidence 568888888754322 23445566 9999999999 89999999999999999999888766
Q ss_pred e---ecCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCC--------------------------eEEEEEeccCCc
Q psy11036 80 S---VNHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGG--------------------------KLLHKFTCHHKT 128 (239)
Q Consensus 80 ~---~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~--------------------------~~~~~~~~~~~~ 128 (239)
. ++|.+.|.+++|.|... .|++|+ ||.|.|||++..+ +.+...+++...
T Consensus 137 ~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~t 216 (720)
T KOG0321|consen 137 GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNT 216 (720)
T ss_pred ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCc
Confidence 5 38999999999999665 555666 8999999997432 011122344445
Q ss_pred eEE---EEEcCCCCEEEEEec-CCeEEEEEcc-cceEeee---------------------------------ecceeEE
Q psy11036 129 VTS---LCLASGGKRLISASL-DHHAKIYEMT-LKTVSSF---------------------------------TGGLDVC 170 (239)
Q Consensus 129 i~~---i~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~~~---------------------------------~~~~~i~ 170 (239)
|.+ +.+..|...||+++. |+.|++||++ ....... +.++.|+
T Consensus 217 i~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy 296 (720)
T KOG0321|consen 217 IFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIY 296 (720)
T ss_pred eeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEE
Confidence 555 555568888998888 9999999997 2221111 3366699
Q ss_pred EEEccCCC-EEEEEEecccCc--EEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE-ec-CCCCeeeeEecC
Q psy11036 171 IWDMLGGG-KLLHKFTCHHKT--VTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT-LD-YPSPVLSIDVSM 239 (239)
Q Consensus 171 ~~d~~~~~-~~~~~~~~h~~~--v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp 239 (239)
.||+.+.. .++..+.++... -..-..+|++.++++|+.|...++|.+.+.+.--. +. |.-.|++++|.|
T Consensus 297 ~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321|consen 297 FYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred EEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence 99987643 344444444321 11234689999999999999999999987654332 33 777899999876
No 137
>KOG0639|consensus
Probab=99.89 E-value=3.1e-22 Score=152.36 Aligned_cols=175 Identities=22% Similarity=0.280 Sum_probs=154.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
-+||.|.|||+.+...++.|++|. +.+.||..++ ++..|.+|+.|.+||.||++++.........
T Consensus 528 csdGnI~vwDLhnq~~VrqfqGht--------------DGascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhdF~ 592 (705)
T KOG0639|consen 528 CSDGNIAVWDLHNQTLVRQFQGHT--------------DGASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHDFS 592 (705)
T ss_pred ccCCcEEEEEcccceeeecccCCC--------------CCceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhhhh
Confidence 468999999999999999999999 9999999999 8999999999999999999999888888888
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
..|.++.++|++.++++|. ++.+.+.... +.....+.-|..-|.++.|.+-|+++++.+.|+.+..|.+.
T Consensus 593 SQIfSLg~cP~~dWlavGMens~vevlh~s--kp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtP------- 663 (705)
T KOG0639|consen 593 SQIFSLGYCPTGDWLAVGMENSNVEVLHTS--KPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP------- 663 (705)
T ss_pred hhheecccCCCccceeeecccCcEEEEecC--CccceeecccccEEEEEEecccCceeeecCchhhhhhccCc-------
Confidence 9999999999999999999 5888887774 55556677799999999999999999999999999999877
Q ss_pred ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 164 ~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
-+..+...+. .+.|.++..|.|+++++|||.|+...+|.+
T Consensus 664 -------------yGasiFqskE-~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 664 -------------YGASIFQSKE-SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred -------------cccceeeccc-cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 1222332232 577999999999999999999999999875
No 138
>KOG4328|consensus
Probab=99.88 E-value=8.6e-22 Score=147.99 Aligned_cols=194 Identities=22% Similarity=0.285 Sum_probs=153.7
Q ss_pred CCCEEEEeeCCCcc----eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 6 PILIVALWDIPSEA----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.-|+|-+||+.+.+ .+..+..|. .+|.++.|+|.+...+++.++||++++-|+++......+
T Consensus 208 K~G~VG~Wn~~~~~~d~d~v~~f~~hs--------------~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~ 273 (498)
T KOG4328|consen 208 KGGQVGLWNFGTQEKDKDGVYLFTPHS--------------GPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVL 273 (498)
T ss_pred CCCcEEEEecCCCCCccCceEEeccCC--------------ccccceEecCCChhheeeeccCceeeeeeecchhhHHHh
Confidence 45999999995332 344566677 999999999988889999999999999999876543333
Q ss_pred c---CCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc
Q psy11036 82 N---HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 ~---~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~ 156 (239)
. .......+.|+.+...++.+.+ |.+.+||++..+.....+.-|...|+.++++|.. .+|++++.|++.+|||++
T Consensus 274 s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R 353 (498)
T KOG4328|consen 274 SLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLR 353 (498)
T ss_pred hcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehh
Confidence 2 3445677888887777777775 8999999997777788888899999999999965 579999999999999998
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc----cCCeeeEEecCC
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM----VNFSPVHTLDYP 229 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~----~~~~~~~~~~~~ 229 (239)
. +.....+....-.|...|.++.|||.+..|+|.+.|..|+|||. ..-+++.++.|+
T Consensus 354 ~----------------l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn 414 (498)
T KOG4328|consen 354 Q----------------LRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHN 414 (498)
T ss_pred h----------------hcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeecc
Confidence 0 01112233444579999999999998877999999999999998 455667777654
No 139
>KOG1007|consensus
Probab=99.88 E-value=4.1e-21 Score=136.94 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=141.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eeee------cCCCCEEEEEEec--CCcEEEEeCCCcEEEEEcc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMSV------NHGSPVESVLCLP--SGGIFVTGGGLDVCIWDML 113 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-~~~~------~~~~~v~~~~~~~--~~~~l~~~~~~~i~~~d~~ 113 (239)
+.|.|+.|.| ++..+++-. |..|.+|++..... +..+ .+....++-+|+| ++..+++.+++++..||++
T Consensus 124 g~i~cvew~P-ns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~R 201 (370)
T KOG1007|consen 124 GKINCVEWEP-NSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLR 201 (370)
T ss_pred CceeeEEEcC-CCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEcc
Confidence 7899999999 787877654 78899999987765 3333 2455678889998 7899999999999999999
Q ss_pred CCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 114 GGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 114 ~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
...+....-.+|...|..+.|+|+.+ +|++|+.||.|+|||.+ ....++.++.+|...|.
T Consensus 202 T~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R-------------------~tk~pv~el~~HsHWvW 262 (370)
T KOG1007|consen 202 TMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR-------------------KTKFPVQELPGHSHWVW 262 (370)
T ss_pred chhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc-------------------CCCccccccCCCceEEE
Confidence 54555555568999999999999875 68899999999999987 44778888999999999
Q ss_pred EEEEcc-CCCeEEEEcCCceEEEEEccCC------------------------e-----eeEEec-CCCCeeeeEec
Q psy11036 193 SLCLAS-GGKRLISASLDHHAKIYEMVNF------------------------S-----PVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 193 ~~~~s~-~~~~l~s~s~d~~i~iwd~~~~------------------------~-----~~~~~~-~~~~v~~~~~s 238 (239)
++.|+| ..+++++|+.|..|.+|-...- + .+.++. |+..|.+++||
T Consensus 263 ~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWS 339 (370)
T KOG1007|consen 263 AVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWS 339 (370)
T ss_pred EEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeec
Confidence 999999 4678899999999999954310 1 233454 88899999997
No 140
>KOG1332|consensus
Probab=99.88 E-value=2.9e-22 Score=139.53 Aligned_cols=178 Identities=24% Similarity=0.280 Sum_probs=143.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---VMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~ 115 (239)
+.|..+...- -+.+|++++.|++|+|+.+++... +.++ +|.+||..++|.. .|.+|++++ ||.|.||.-. +
T Consensus 12 D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~-~ 89 (299)
T KOG1332|consen 12 DMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE-N 89 (299)
T ss_pred hhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecC-C
Confidence 7788887777 789999999999999999986653 4455 7999999999976 799999999 9999999987 4
Q ss_pred Ce--EEEEEeccCCceEEEEEcCCC--CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 116 GK--LLHKFTCHHKTVTSLCLASGG--KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 116 ~~--~~~~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
++ .......|...|++++|.|.+ -.|++++.||.|.|.+.+.. ...........|.-.|
T Consensus 90 g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-----------------g~w~t~ki~~aH~~Gv 152 (299)
T KOG1332|consen 90 GRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-----------------GGWTTSKIVFAHEIGV 152 (299)
T ss_pred CchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-----------------CCccchhhhhcccccc
Confidence 32 445567899999999999854 68999999999999988711 0112223446799999
Q ss_pred EEEEEccC---C-----------CeEEEEcCCceEEEEEccCCe--eeEEec-CCCCeeeeEecC
Q psy11036 192 TSLCLASG---G-----------KRLISASLDHHAKIYEMVNFS--PVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~~---~-----------~~l~s~s~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~sp 239 (239)
++++|.|. | +.|++|+.|..|+||+..+++ .-++++ |.+-|+.++|+|
T Consensus 153 nsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP 217 (299)
T KOG1332|consen 153 NSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAP 217 (299)
T ss_pred ceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhcc
Confidence 99999985 4 569999999999999998753 334465 888999999988
No 141
>KOG0647|consensus
Probab=99.88 E-value=3.8e-21 Score=137.73 Aligned_cols=94 Identities=23% Similarity=0.314 Sum_probs=79.4
Q ss_pred CCCCEEEEeeCCC-ccee-eeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPS-EAQV-STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+=||+||+|+++. |..+ +....|. ++|.+++|+. ++..+++|+.|+.+++||+.+++....-.
T Consensus 47 SWD~tVR~wevq~~g~~~~ka~~~~~--------------~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~Q~~~v~~ 111 (347)
T KOG0647|consen 47 SWDGTVRIWEVQNSGQLVPKAQQSHD--------------GPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASGQVSQVAA 111 (347)
T ss_pred ccCCceEEEEEecCCcccchhhhccC--------------CCeEEEEEcc-CCceEEeeccCCceEEEEccCCCeeeeee
Confidence 4479999999976 3433 2344566 9999999999 78999999999999999999997666557
Q ss_pred CCCCEEEEEEecCCc--EEEEeC-CCcEEEEEcc
Q psy11036 83 HGSPVESVLCLPSGG--IFVTGG-GLDVCIWDML 113 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~--~l~~~~-~~~i~~~d~~ 113 (239)
|.++|.+++|-+... .|++|+ |.+|+.||.+
T Consensus 112 Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R 145 (347)
T KOG0647|consen 112 HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR 145 (347)
T ss_pred cccceeEEEEecCCCcceeEecccccceeecccC
Confidence 999999999988655 888999 9999999987
No 142
>KOG0321|consensus
Probab=99.88 E-value=2.5e-21 Score=150.92 Aligned_cols=204 Identities=19% Similarity=0.306 Sum_probs=152.9
Q ss_pred CCCCCCEEEEeeCCCcceeee--eeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----
Q psy11036 3 HDLPILIVALWDIPSEAQVST--FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD---- 76 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---- 76 (239)
+.+.|.++++||+++.+.+.. +.+|. ..|.+++|.|.+...+++|+.||.+.|||++-..
T Consensus 117 sasGDsT~r~Wdvk~s~l~G~~~~~GH~--------------~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~ 182 (720)
T KOG0321|consen 117 SASGDSTIRPWDVKTSRLVGGRLNLGHT--------------GSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDAL 182 (720)
T ss_pred EccCCceeeeeeeccceeecceeecccc--------------cccchhhhccCCCcceeeccCCCcEEEEEEeccchhhH
Confidence 345688999999999888776 89999 9999999999999999999999999999986322
Q ss_pred ----------------ceeee--------cCCCCEEE---EEEecCCcEEEEeC--CCcEEEEEccCCCeEE-------E
Q psy11036 77 ----------------PVMSV--------NHGSPVES---VLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL-------H 120 (239)
Q Consensus 77 ----------------~~~~~--------~~~~~v~~---~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~-------~ 120 (239)
+...+ .+...+.. +.+..|...|++++ |+.|++||++...... .
T Consensus 183 e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~ 262 (720)
T KOG0321|consen 183 EEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSD 262 (720)
T ss_pred HHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCccc
Confidence 10000 12333444 55566788888877 8999999998432211 1
Q ss_pred EEecc---CCceEEEEEcCCCCEEEEEecCCeEEEEEccc---ceEeee------------------------ecceeEE
Q psy11036 121 KFTCH---HKTVTSLCLASGGKRLISASLDHHAKIYEMTL---KTVSSF------------------------TGGLDVC 170 (239)
Q Consensus 121 ~~~~~---~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~------------------------~~~~~i~ 170 (239)
.+..| .-.++++.....|.+|.+.+.|+.|++|++.. ..+..+ +.+...+
T Consensus 263 ~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ay 342 (720)
T KOG0321|consen 263 KYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAY 342 (720)
T ss_pred CccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCccee
Confidence 22223 33677888888888888888899999999972 111111 2344588
Q ss_pred EEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCC
Q psy11036 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 171 ~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~ 220 (239)
+|.+.........+.+|...|++++|.|. -.-++++++|..++||++..+
T Consensus 343 iw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 343 IWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred eeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 99998888888889999999999999984 344777799999999999653
No 143
>KOG2106|consensus
Probab=99.88 E-value=1.6e-19 Score=137.65 Aligned_cols=218 Identities=18% Similarity=0.300 Sum_probs=163.5
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
.++++..+.+||...+......+..+ +.|...+|+|.+.+++++.+. +.+.+|+.+.+...++.
T Consensus 175 D~s~~h~lSVWdWqk~~~~~~vk~sn--------------e~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~ 239 (626)
T KOG2106|consen 175 DDSNPHMLSVWDWQKKAKLGPVKTSN--------------EVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQG 239 (626)
T ss_pred cCCCccccchhhchhhhccCcceecc--------------ceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEee
Confidence 34667788889988877777777766 889999999988888888876 78999999988665543
Q ss_pred --c--CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 82 --N--HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 82 --~--~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
+ .+.-|.|++|.++|..+..-++|.|.||+.. ..+..+....|.+.|.+++...+|.+|- |+.|..|..||-..
T Consensus 240 ~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~-~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y 317 (626)
T KOG2106|consen 240 IFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKG-TNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNY 317 (626)
T ss_pred ccccccceEEEEEEEcCCCCEEeecCCceEEEEeCC-CceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccccc
Confidence 1 3467999999999987765568999999997 6666666669999999999999987655 99999999998432
Q ss_pred ceEeee---------------------------------------------------------------ecceeEEEEE-
Q psy11036 158 KTVSSF---------------------------------------------------------------TGGLDVCIWD- 173 (239)
Q Consensus 158 ~~~~~~---------------------------------------------------------------~~~~~i~~~d- 173 (239)
+.+... .-+..+++|+
T Consensus 318 ~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~ 397 (626)
T KOG2106|consen 318 RKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWND 397 (626)
T ss_pred cccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccC
Confidence 211111 0122255554
Q ss_pred -------------------------------------ccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 174 -------------------------------------MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 174 -------------------------------------~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.++ ...+ .++....++++++|+|+|.+||.|+.|+.|+||.
T Consensus 398 ~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~-~~lv-~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~ 475 (626)
T KOG2106|consen 398 HKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTET-QDLV-TIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYR 475 (626)
T ss_pred CceeEEEEecCceeEeeccCcceEEEeeccceEEEEeccc-ceeE-EEEecCCceEEEEEcCCCCEEEEecCCCeEEEEE
Confidence 222 1112 2222367899999999999999999999999999
Q ss_pred ccC-CeeeEEec--CCCCeeeeEecC
Q psy11036 217 MVN-FSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~-~~~~~~~~--~~~~v~~~~~sp 239 (239)
+.. +..+.... +.++|+.++||+
T Consensus 476 Vs~~g~~y~r~~k~~gs~ithLDwS~ 501 (626)
T KOG2106|consen 476 VSANGRKYSRVGKCSGSPITHLDWSS 501 (626)
T ss_pred ECCCCcEEEEeeeecCceeEEeeecC
Confidence 964 44444444 458999999986
No 144
>KOG2055|consensus
Probab=99.87 E-value=2.7e-20 Score=140.22 Aligned_cols=198 Identities=14% Similarity=0.219 Sum_probs=157.6
Q ss_pred CCCCCEEEEeeCCC--cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 4 DLPILIVALWDIPS--EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.|-||+++||.++. ...++.+.... -+|.+.+|.|++...+++++....++.||+.+.+....-
T Consensus 231 aG~d~~lrifqvDGk~N~~lqS~~l~~--------------fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~ 296 (514)
T KOG2055|consen 231 AGLDGTLRIFQVDGKVNPKLQSIHLEK--------------FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLK 296 (514)
T ss_pred ecCCCcEEEEEecCccChhheeeeecc--------------CccceeeecCCCceEEEecccceEEEEeecccccccccc
Confidence 47789999998853 34556666565 889999999944449999999999999999887654322
Q ss_pred ---cC-CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 82 ---NH-GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 ---~~-~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
++ +..+.....+|++++++..+ .|.|.+.... +++.+.+++ ..+.|..++|+.+++.|++++.+|.|.+||++
T Consensus 297 ~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhak-T~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~ 374 (514)
T KOG2055|consen 297 PPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAK-TKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLR 374 (514)
T ss_pred CCCCcccchhheeEecCCCCeEEEcccCceEEeehhh-hhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecC
Confidence 22 34567788899999999998 7999999887 888888887 57889999999999999999999999999999
Q ss_pred -cceEeeeecceeEEEEEccCCCEEEEEEecccCc--EEEEEEccCCCeEEEEcCCceEEEEEcc------CCeeeEEec
Q psy11036 157 -LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKT--VTSLCLASGGKRLISASLDHHAKIYEMV------NFSPVHTLD 227 (239)
Q Consensus 157 -~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~--v~~~~~s~~~~~l~s~s~d~~i~iwd~~------~~~~~~~~~ 227 (239)
..+++.+ .. .+. -++++.|+++.+||+||..|.|.|||.. +.+|+..+.
T Consensus 375 ~~~~~~rf---------------------~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~d 432 (514)
T KOG2055|consen 375 QNSCLHRF---------------------VD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVD 432 (514)
T ss_pred CcceEEEE---------------------ee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhh
Confidence 3333333 32 222 3567788999999999999999999964 356777776
Q ss_pred -CCCCeeeeEecC
Q psy11036 228 -YPSPVLSIDVSM 239 (239)
Q Consensus 228 -~~~~v~~~~~sp 239 (239)
....|++|.|+|
T Consensus 433 NLtt~Itsl~Fn~ 445 (514)
T KOG2055|consen 433 NLTTAITSLQFNH 445 (514)
T ss_pred hhheeeeeeeeCc
Confidence 778999999986
No 145
>KOG1273|consensus
Probab=99.86 E-value=4.4e-20 Score=133.22 Aligned_cols=175 Identities=14% Similarity=0.191 Sum_probs=139.2
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.+|.|.|||+.+...-+.+.+|. .+|++++|++ +++.|++++.|..+.+||+..|.+...+...+
T Consensus 43 ~nG~vvI~D~~T~~iar~lsaH~--------------~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l~rirf~s 107 (405)
T KOG1273|consen 43 ANGRVVIYDFDTFRIARMLSAHV--------------RPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDS 107 (405)
T ss_pred cCCcEEEEEccccchhhhhhccc--------------cceeEEEecC-CCCEeeeecCCceeEEEeccCCCceeEEEccC
Confidence 57999999999999889999999 9999999999 89999999999999999999999999999999
Q ss_pred CEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEecc------CCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 86 PVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH------HKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
+|..+.|+|.....+++. +..-.+-++. . +.++.-.. +..-.+..|.+.|+++++|...|.+.++|..
T Consensus 108 pv~~~q~hp~k~n~~va~~~~~sp~vi~~s-~--~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~- 183 (405)
T KOG1273|consen 108 PVWGAQWHPRKRNKCVATIMEESPVVIDFS-D--PKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE- 183 (405)
T ss_pred ccceeeeccccCCeEEEEEecCCcEEEEec-C--CceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc-
Confidence 999999999554433333 4444444443 1 12222111 1122333688999999999999999999988
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+.+++..++-.. ..|..+.++..|++|+.-+.|..||.|+++
T Consensus 184 -------------------t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 184 -------------------TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred -------------------hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 344555545444 789999999999999999999999999986
No 146
>KOG1009|consensus
Probab=99.86 E-value=3.3e-20 Score=137.69 Aligned_cols=205 Identities=18% Similarity=0.271 Sum_probs=159.8
Q ss_pred CCCCCCCEEEEeeCCCcce---------eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeC
Q psy11036 2 SHDLPILIVALWDIPSEAQ---------VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDT 72 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 72 (239)
.+.|.|..|++|-+..++. ...+..|. ..|+++.|+| ++++|++|+.+|.|.+|..
T Consensus 30 aT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~--------------~aVN~vRf~p-~gelLASg~D~g~v~lWk~ 94 (434)
T KOG1009|consen 30 ATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHT--------------RAVNVVRFSP-DGELLASGGDGGEVFLWKQ 94 (434)
T ss_pred ecccCccceeeeeeeecCCCCCceeEEEeecccCCc--------------ceeEEEEEcC-CcCeeeecCCCceEEEEEe
Confidence 4678899999998764322 33556677 9999999999 8999999999999999986
Q ss_pred C--------C-----CC-ce--eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEE
Q psy11036 73 R--------S-----PD-PV--MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 134 (239)
Q Consensus 73 ~--------~-----~~-~~--~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~ 134 (239)
. + .+ .+ ..+ .|...+..++|+|++.++++++ |+.+.+||+. .++....+..|...+..++|
T Consensus 95 ~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~-~G~l~~~~~dh~~yvqgvaw 173 (434)
T KOG1009|consen 95 GDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH-AGQLLAILDDHEHYVQGVAW 173 (434)
T ss_pred cCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec-cceeEeeccccccccceeec
Confidence 6 2 11 11 122 4889999999999999999999 8999999999 89999999999999999999
Q ss_pred cCCCCEEEEEecCCeEEEEEcc-cceEeee--------------------------------------------------
Q psy11036 135 ASGGKRLISASLDHHAKIYEMT-LKTVSSF-------------------------------------------------- 163 (239)
Q Consensus 135 ~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------------------------------------------------- 163 (239)
.|-++++++-+.|...+.+.+. .+.+...
T Consensus 174 Dpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~ 253 (434)
T KOG1009|consen 174 DPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFK 253 (434)
T ss_pred chhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceee
Confidence 9999999998888877766654 1111110
Q ss_pred ----------------------------------------------------------------ecceeEEEEEccCCCE
Q psy11036 164 ----------------------------------------------------------------TGGLDVCIWDMLGGGK 179 (239)
Q Consensus 164 ----------------------------------------------------------------~~~~~i~~~d~~~~~~ 179 (239)
.....+++||.++...
T Consensus 254 ~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P 333 (434)
T KOG1009|consen 254 VGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEP 333 (434)
T ss_pred eCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEeccccccc
Confidence 1123377788666434
Q ss_pred EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 180 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
....-.-|-.+|+.++|++||..|+..|.||...+-.++.+++
T Consensus 334 ~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 334 LAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred eEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence 4444456889999999999999999999999888776665544
No 147
>KOG2445|consensus
Probab=99.86 E-value=4.6e-19 Score=127.47 Aligned_cols=194 Identities=21% Similarity=0.232 Sum_probs=145.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce----eee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV----MSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~----~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~ 114 (239)
+-|.++.|.+ .|+.+++++.|++|+|||.+..... ... .|.+.|..+.|.+ -|+.+++++ |+++.||.-..
T Consensus 14 DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~ 92 (361)
T KOG2445|consen 14 DLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQE 92 (361)
T ss_pred ceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecc
Confidence 8899999999 8999999999999999997554322 222 4899999999976 588999998 99999997631
Q ss_pred --------CCeEEEEEeccCCceEEEEEcC--CCCEEEEEecCCeEEEEEcc-cceEee------e--------------
Q psy11036 115 --------GGKLLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEMT-LKTVSS------F-------------- 163 (239)
Q Consensus 115 --------~~~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~------~-------------- 163 (239)
.-....++......|+.++|.| -|-.|++++.||.++||+.. -..+.. +
T Consensus 93 ~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~ 172 (361)
T KOG2445|consen 93 KSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPC 172 (361)
T ss_pred cccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcc
Confidence 1124456667788999999999 46789999999999999874 111110 0
Q ss_pred ----------------ec-------ceeEEEEEccCCC---EEEEEEecccCcEEEEEEccC----CCeEEEEcCCceEE
Q psy11036 164 ----------------TG-------GLDVCIWDMLGGG---KLLHKFTCHHKTVTSLCLASG----GKRLISASLDHHAK 213 (239)
Q Consensus 164 ----------------~~-------~~~i~~~d~~~~~---~~~~~~~~h~~~v~~~~~s~~----~~~l~s~s~d~~i~ 213 (239)
.| -..+.+|...... ..+.++.+|..+|++++|.|+ -..||+++.|| |+
T Consensus 173 ~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~ 251 (361)
T KOG2445|consen 173 FCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VR 251 (361)
T ss_pred eEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EE
Confidence 01 1236677655444 345567789999999999996 35789999999 99
Q ss_pred EEEccCC--------------------eeeEEec-CCCCeeeeEec
Q psy11036 214 IYEMVNF--------------------SPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 214 iwd~~~~--------------------~~~~~~~-~~~~v~~~~~s 238 (239)
||.++.. +.+..+. |.+.|..+.|+
T Consensus 252 I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN 297 (361)
T KOG2445|consen 252 IFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN 297 (361)
T ss_pred EEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe
Confidence 9998731 1233343 77899999886
No 148
>KOG1036|consensus
Probab=99.86 E-value=8.4e-20 Score=131.12 Aligned_cols=180 Identities=22% Similarity=0.363 Sum_probs=137.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSP 86 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 86 (239)
||.+++||+...+....++ |. .++.+++|.+ ...+++|+-||.|+.+|+.+++....-.|..+
T Consensus 34 DgslrlYdv~~~~l~~~~~-~~--------------~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~ 96 (323)
T KOG1036|consen 34 DGSLRLYDVPANSLKLKFK-HG--------------APLLDCAFAD--ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEG 96 (323)
T ss_pred cCcEEEEeccchhhhhhee-cC--------------CceeeeeccC--CceEEEeccCceEEEEEecCCcceeeccCCCc
Confidence 6999999998876655555 44 8999999986 57889999999999999999887766689999
Q ss_pred EEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc-eE---
Q psy11036 87 VESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK-TV--- 160 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~--- 160 (239)
+.|+.+++....+++|+ |++|++||.+ .......+. ....|.++.. .|+.|++|+.|..+.+||++ .. ..
T Consensus 97 i~ci~~~~~~~~vIsgsWD~~ik~wD~R-~~~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~~~q~r 172 (323)
T KOG1036|consen 97 IRCIEYSYEVGCVISGSWDKTIKFWDPR-NKVVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDEPFQRR 172 (323)
T ss_pred eEEEEeeccCCeEEEcccCccEEEEecc-ccccccccc-cCceEEEEec--cCCEEEEeecCceEEEEEcccccchhhhc
Confidence 99999999888889999 9999999998 433333333 2335666655 46678888888888888886 11 11
Q ss_pred -----------eee--------------------------------------------------------------ecc-
Q psy11036 161 -----------SSF--------------------------------------------------------------TGG- 166 (239)
Q Consensus 161 -----------~~~--------------------------------------------------------------~~~- 166 (239)
..+ +|+
T Consensus 173 eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGs 252 (323)
T KOG1036|consen 173 ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGS 252 (323)
T ss_pred cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCC
Confidence 000 333
Q ss_pred -eeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC
Q psy11036 167 -LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 167 -~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
+-|.+||+.+ .+.+..+......|.+++|+.+|..||.++.
T Consensus 253 DG~V~~Wd~~~-rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 253 DGIVNIWDLFN-RKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred CceEEEccCcc-hhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 3388999887 5556666666778999999999999998864
No 149
>KOG0294|consensus
Probab=99.86 E-value=6.1e-20 Score=132.33 Aligned_cols=135 Identities=22% Similarity=0.289 Sum_probs=120.8
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC--EEEEEecCCeEEEEEcccc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK--RLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~--~l~~~~~d~~i~i~d~~~~ 158 (239)
.|.+++++++.+ +.++++|+ |.+|++||++ ....+..+..|.+.|+++.|.+.-. +|++|+.||.|.+|+..
T Consensus 41 aH~~sitavAVs--~~~~aSGssDetI~IYDm~-k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~-- 115 (362)
T KOG0294|consen 41 AHAGSITALAVS--GPYVASGSSDETIHIYDMR-KRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG-- 115 (362)
T ss_pred ccccceeEEEec--ceeEeccCCCCcEEEEecc-chhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcC--
Confidence 489999999986 89999999 8999999999 6777778888999999999998664 89999999999999987
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
..+++..+++|.+.|+.++.+|.+++-++.+.|+.+++|++-+|+.-...+.....+.+.|+
T Consensus 116 ------------------~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~ 177 (362)
T KOG0294|consen 116 ------------------SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWS 177 (362)
T ss_pred ------------------CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEc
Confidence 56788888999999999999999999999999999999999999888877766666668887
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 178 ~ 178 (362)
T KOG0294|consen 178 P 178 (362)
T ss_pred C
Confidence 6
No 150
>KOG1188|consensus
Probab=99.86 E-value=2.3e-20 Score=135.79 Aligned_cols=191 Identities=21% Similarity=0.251 Sum_probs=149.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.|.|++||..+++.+..++++. ..+..++|... ..+.+.+++.||+|++||++.......+
T Consensus 48 Sngsv~lyd~~tg~~l~~fk~~~--------------~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~ 113 (376)
T KOG1188|consen 48 SNGSVRLYDKGTGQLLEEFKGPP--------------ATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWT 113 (376)
T ss_pred cCCeEEEEeccchhhhheecCCC--------------CcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheecc
Confidence 56999999999999999999998 88889999864 5678999999999999999988766655
Q ss_pred cCC-CCEEEEEEecCCcEEEEeC-----CCcEEEEEccCCCeEEEE-EeccCCceEEEEEcCC-CCEEEEEecCCeEEEE
Q psy11036 82 NHG-SPVESVLCLPSGGIFVTGG-----GLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASG-GKRLISASLDHHAKIY 153 (239)
Q Consensus 82 ~~~-~~v~~~~~~~~~~~l~~~~-----~~~i~~~d~~~~~~~~~~-~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~ 153 (239)
.++ .+..+++...+++.+++|. +-.|.+||.|...+++.. ...|...|++++|+|. -+.|++|+.||.|.+|
T Consensus 114 ~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlf 193 (376)
T KOG1188|consen 114 QQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLF 193 (376)
T ss_pred CCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEee
Confidence 233 4677787777788888886 356899999966664544 4579999999999995 4799999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
|++.. .....+...-.|...|..+.|..++ +.+.+-+......+|+++.+.+...++
T Consensus 194 D~~~d-----------------~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~ 251 (376)
T KOG1188|consen 194 DTKKD-----------------NEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLE 251 (376)
T ss_pred ecCCC-----------------cchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhccc
Confidence 99811 0111122223467789999999876 457788889999999999887655444
No 151
>KOG4328|consensus
Probab=99.86 E-value=1.4e-20 Score=141.47 Aligned_cols=192 Identities=17% Similarity=0.211 Sum_probs=143.8
Q ss_pred eCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCCc----eeee-cCCCCE
Q psy11036 14 DIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS-DIVISGSYDKTVNVYDTRSPDP----VMSV-NHGSPV 87 (239)
Q Consensus 14 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~v~vw~~~~~~~----~~~~-~~~~~v 87 (239)
|+.+-.....++.+. +.|++++|+|... .++++|..-|+|-+||+.+.++ +..+ .|..+|
T Consensus 172 ~l~~~~~~~v~kv~~--------------~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~V 237 (498)
T KOG4328|consen 172 DLDDYRILNVAKVTD--------------RRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPV 237 (498)
T ss_pred ccccceecceeEecc--------------cceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccc
Confidence 344444455556666 8999999999655 6888999999999999964332 2223 699999
Q ss_pred EEEEEecC-CcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 88 ESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 88 ~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
.++.|+|. ...+++.+ ||+|++-|++ ... .+.........+..+.|+.+...++.+..=|.+.+||++
T Consensus 238 s~l~F~P~n~s~i~ssSyDGtiR~~D~~-~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R------- 309 (498)
T KOG4328|consen 238 SGLKFSPANTSQIYSSSYDGTIRLQDFE-GNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLR------- 309 (498)
T ss_pred cceEecCCChhheeeeccCceeeeeeec-chhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEee-------
Confidence 99999994 34555555 9999999997 322 222333344567788888888888888777787888877
Q ss_pred ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCCe-----eeEEecCCCCeeeeEe
Q psy11036 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNFS-----PVHTLDYPSPVLSIDV 237 (239)
Q Consensus 164 ~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~-----~~~~~~~~~~v~~~~~ 237 (239)
+.+.....+.-|...|.+++++|- ..+|||+|.|++++|||++... .+.++.|..+|+++.|
T Consensus 310 ------------~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyF 377 (498)
T KOG4328|consen 310 ------------TDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYF 377 (498)
T ss_pred ------------cCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEE
Confidence 334445555778889999999994 5678999999999999997532 2667779999999999
Q ss_pred cC
Q psy11036 238 SM 239 (239)
Q Consensus 238 sp 239 (239)
||
T Consensus 378 SP 379 (498)
T KOG4328|consen 378 SP 379 (498)
T ss_pred cC
Confidence 98
No 152
>KOG1408|consensus
Probab=99.85 E-value=2.9e-20 Score=147.15 Aligned_cols=196 Identities=20% Similarity=0.306 Sum_probs=158.6
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC--CCCEEEEeeCCCeEEEEeCCCC-Cceeee-c
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV--SSDIVISGSYDKTVNVYDTRSP-DPVMSV-N 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~v~vw~~~~~-~~~~~~-~ 82 (239)
-|.++||++.+.+.+..+.+|. ..|.|+.|+.. ...+|++++.|..|.|||+... .++.++ +
T Consensus 480 ~GnlrVy~Lq~l~~~~~~eAHe--------------sEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~ 545 (1080)
T KOG1408|consen 480 GGNLRVYDLQELEYTCFMEAHE--------------SEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDG 545 (1080)
T ss_pred cCceEEEEehhhhhhhheeccc--------------ceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcc
Confidence 4999999999999999999999 99999999852 3468999999999999999644 455666 7
Q ss_pred CCCCEEEEEEecCC--cEEEEeC-CCcEEEEEccCCCeEEEEEec-----cCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 83 HGSPVESVLCLPSG--GIFVTGG-GLDVCIWDMLGGGKLLHKFTC-----HHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 83 ~~~~v~~~~~~~~~--~~l~~~~-~~~i~~~d~~~~~~~~~~~~~-----~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
|...|+++.|..+| ..+++++ |..|. ++..........+.. ....+..++..|..+++++++.|..|+||+
T Consensus 546 HSssITsvKFa~~gln~~MiscGADksim-Fr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~ 624 (1080)
T KOG1408|consen 546 HSSSITSVKFACNGLNRKMISCGADKSIM-FRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFD 624 (1080)
T ss_pred cccceeEEEEeecCCceEEEeccCchhhh-eehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEe
Confidence 99999999999877 5666666 65544 443311111111221 235789999999999999999999999999
Q ss_pred cc-cceEeeeec-------------------------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC
Q psy11036 155 MT-LKTVSSFTG-------------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 155 ~~-~~~~~~~~~-------------------------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
+. ++....|.| +..+.++|..+ ++++..+.+|...|+.+.|.+|.+.|++.+.
T Consensus 625 i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s-gEcvA~m~GHsE~VTG~kF~nDCkHlISvsg 703 (1080)
T KOG1408|consen 625 IESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS-GECVAQMTGHSEAVTGVKFLNDCKHLISVSG 703 (1080)
T ss_pred ccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc-chhhhhhcCcchheeeeeecccchhheeecC
Confidence 99 777777732 44488899876 8999999999999999999999999999999
Q ss_pred CceEEEEEcc
Q psy11036 209 DHHAKIYEMV 218 (239)
Q Consensus 209 d~~i~iwd~~ 218 (239)
||.|.||.+.
T Consensus 704 DgCIFvW~lp 713 (1080)
T KOG1408|consen 704 DGCIFVWKLP 713 (1080)
T ss_pred CceEEEEECc
Confidence 9999999875
No 153
>KOG1445|consensus
Probab=99.85 E-value=3.5e-20 Score=145.04 Aligned_cols=113 Identities=23% Similarity=0.310 Sum_probs=97.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee------eec-CCCCEEEEEEecCC-cEEEEeCCCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM------SVN-HGSPVESVLCLPSG-GIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~------~~~-~~~~v~~~~~~~~~-~~l~~~~~~~i~~~d~~~ 114 (239)
+.|+.+.|+|....+|++++.|..|+||.+..+.... .++ ....+.++.|+|.. .+++++..|.+.+||+.
T Consensus 80 d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~s- 158 (1012)
T KOG1445|consen 80 DQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGSVYITDIS- 158 (1012)
T ss_pred ceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCceEEEEEcc-
Confidence 9999999999989999999999999999998543222 223 34578899999954 46666668999999998
Q ss_pred CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 115 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
+++.+..+.+|...|.+..|+.||..+++.+.|..|+|||.+
T Consensus 159 tqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 159 TQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred cCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 788888999999999999999999999999999999999987
No 154
>KOG0642|consensus
Probab=99.85 E-value=1.7e-20 Score=144.37 Aligned_cols=183 Identities=27% Similarity=0.425 Sum_probs=149.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC--------CCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS--------PDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~--------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~ 112 (239)
+.|+.++|+| ....|++++.||++++|++.. -+++.++ .|.++|.|+++.+++..+++|+ ||+|+.|++
T Consensus 295 d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 295 DCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred hhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 8899999999 788999999999999999932 2355666 6999999999999999999999 999999976
Q ss_pred cCC---------CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee--------------------
Q psy11036 113 LGG---------GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF-------------------- 163 (239)
Q Consensus 113 ~~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-------------------- 163 (239)
... ......+.+|.+.+..+++++....|++++.||++++|+........+
T Consensus 374 p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a 453 (577)
T KOG0642|consen 374 PPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPA 453 (577)
T ss_pred CCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhH
Confidence 522 124456789999999999999999999999999999999862222111
Q ss_pred ----------------------------------------------------e--cceeEEEEEccCCCEEEEEEecccC
Q psy11036 164 ----------------------------------------------------T--GGLDVCIWDMLGGGKLLHKFTCHHK 189 (239)
Q Consensus 164 ----------------------------------------------------~--~~~~i~~~d~~~~~~~~~~~~~h~~ 189 (239)
+ ....|+++|..+ +.+++....|..
T Consensus 454 ~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~-~~~l~s~~a~~~ 532 (577)
T KOG0642|consen 454 HSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT-GKILHSMVAHKD 532 (577)
T ss_pred hhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccc-cccchheeeccc
Confidence 0 022266777665 778888889999
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++++++.|+|.+|++++.|+.+++|.+....++....
T Consensus 533 svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~ 570 (577)
T KOG0642|consen 533 SVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLEST 570 (577)
T ss_pred eecceeecCCCceEEeecCCceeehhhccchheeeccc
Confidence 99999999999999999999999999997766655443
No 155
>KOG4378|consensus
Probab=99.85 E-value=2.3e-20 Score=142.05 Aligned_cols=218 Identities=18% Similarity=0.239 Sum_probs=165.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEE--eeCCCeEEEEeCCCCC--c-eeee
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVIS--GSYDKTVNVYDTRSPD--P-VMSV 81 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~~~dg~v~vw~~~~~~--~-~~~~ 81 (239)
...++|||....+....+..|.. . -.+.++.|+. . +.|++ .+.|..+++|.-.... . +...
T Consensus 11 gd~~kl~D~s~~~~~~~~~~~t~-----------~-pg~~s~~w~~-~-n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k 76 (673)
T KOG4378|consen 11 GDKTKLSDFSDLETKSEYVHQTA-----------E-PGDFSFNWQR-R-NFLVVASMAGDKVMRIKEKDGKTPEVPRVRK 76 (673)
T ss_pred CCceEEeecccccCccccccCCC-----------C-Ccceeeeccc-c-ceEEEeecCCceeEEEecccCCCCccceeec
Confidence 35789999987766666655541 1 3488999987 3 33444 4567788888754331 1 1111
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
.....-.|++......++++|+ .+.|+|||++ .+...+.++.|...|+++.++-...+||+++..|.|.|..+. +..
T Consensus 77 ~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~-~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~ 155 (673)
T KOG4378|consen 77 LTGDNAFCVACASQSLYEISGGQSGCVKIWDLR-AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK 155 (673)
T ss_pred cccchHHHHhhhhcceeeeccCcCceeeehhhH-HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc
Confidence 2233455666666668899888 7999999998 777778889999999999999999999999999999998876 221
Q ss_pred Eeee------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEE
Q psy11036 160 VSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKI 214 (239)
Q Consensus 160 ~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~i 214 (239)
...+ ...+.+.+||+........-...|..+...++|+| +..+|++.+.|..|.+
T Consensus 156 tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~ 235 (673)
T KOG4378|consen 156 TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINI 235 (673)
T ss_pred ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEE
Confidence 1111 34566999999876666666788999999999999 5567889999999999
Q ss_pred EEccCCeeeEEecCCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
||....+....+....|..+++|+|
T Consensus 236 yD~~s~~s~~~l~y~~Plstvaf~~ 260 (673)
T KOG4378|consen 236 YDIRSQASTDRLTYSHPLSTVAFSE 260 (673)
T ss_pred eecccccccceeeecCCcceeeecC
Confidence 9999999999999999999999975
No 156
>KOG2055|consensus
Probab=99.85 E-value=9.7e-20 Score=137.25 Aligned_cols=206 Identities=15% Similarity=0.163 Sum_probs=164.6
Q ss_pred CCCCEEEEeeCCCcceee--eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPSEAQVS--TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
|+....+.||+.+.+..+ ...++. +..+.....++ ++++|+..+..|.|.+....+++.+..+.
T Consensus 277 ~rrky~ysyDle~ak~~k~~~~~g~e-------------~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~K 342 (514)
T KOG2055|consen 277 GRRKYLYSYDLETAKVTKLKPPYGVE-------------EKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFK 342 (514)
T ss_pred ccceEEEEeeccccccccccCCCCcc-------------cchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheee
Confidence 345778999998876433 233332 15677888999 78999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC-ceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
.++.|..++|+.+++.+++.+ +|.|.+||++ ....++++....+ .-++++.++++.+||+|+..|.|.|||.+....
T Consensus 343 ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~-~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~ 421 (514)
T KOG2055|consen 343 IEGVVSDFTFSSDSKELLASGGTGEVYVWNLR-QNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA 421 (514)
T ss_pred eccEEeeEEEecCCcEEEEEcCCceEEEEecC-CcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhc
Confidence 999999999999998887776 7999999999 6677777763222 336677789999999999999999999761110
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC--CceEEEEEccCCeeeEEecC----CCCeee
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMVNFSPVHTLDY----PSPVLS 234 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~----~~~v~~ 234 (239)
.+..+++..+..-...|++|.|+||.++||.+|. +..+|+-.+.+......++. -+.|+|
T Consensus 422 --------------s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc 487 (514)
T KOG2055|consen 422 --------------STNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTC 487 (514)
T ss_pred --------------cCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEE
Confidence 1235677776667788999999999999988875 67899999988888887773 247999
Q ss_pred eEecC
Q psy11036 235 IDVSM 239 (239)
Q Consensus 235 ~~~sp 239 (239)
|+|||
T Consensus 488 ~aFSP 492 (514)
T KOG2055|consen 488 MAFSP 492 (514)
T ss_pred EEecC
Confidence 99998
No 157
>KOG1524|consensus
Probab=99.84 E-value=3.6e-20 Score=142.29 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=116.7
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
+++||.+.+.+ +.++..+.+.+|. +.+.+-.|+| +|.-|+++++||.|++|.- +|-...++ .
T Consensus 81 ~s~DGkf~il~-k~~rVE~sv~AH~--------------~A~~~gRW~~-dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q 143 (737)
T KOG1524|consen 81 CSNDGRFVILN-KSARVERSISAHA--------------AAISSGRWSP-DGAGLLTAGEDGVIKIWSR-SGMLRSTVVQ 143 (737)
T ss_pred EcCCceEEEec-ccchhhhhhhhhh--------------hhhhhcccCC-CCceeeeecCCceEEEEec-cchHHHHHhh
Confidence 35778888877 3677777888998 9999999999 8999999999999999994 45444444 6
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
...+|.|++|.|+...++.+..+.+.+=.+. ....+-..++|.+-|.++.|++..+.+++|++|-..++||..+..
T Consensus 144 ~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~-~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~ 219 (737)
T KOG1524|consen 144 NEESIRCARWAPNSNSIVFCQGGHISIKPLA-ANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGAN 219 (737)
T ss_pred cCceeEEEEECCCCCceEEecCCeEEEeecc-cccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcc
Confidence 7889999999999888888887888887777 555666788999999999999999999999999999999988433
No 158
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=8.9e-19 Score=139.65 Aligned_cols=214 Identities=15% Similarity=0.091 Sum_probs=148.7
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---KTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~~~~~~~~~~~ 83 (239)
+..|++||.+... .+.+..+. ..+...+|+| +++.|+..+.+ ..|++||+.+++.......
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~--------------~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~ 246 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSS--------------QPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVVASF 246 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCC--------------CccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEEecC
Confidence 5799999986544 45666676 7899999999 78888776543 4799999988764333233
Q ss_pred CCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcc--cc
Q psy11036 84 GSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMT--LK 158 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~--~~ 158 (239)
.+....++|+|+|+.|+.+. +|.+.+|.++........+..+...+....|+|||+.|+..+ .++...||+++ +.
T Consensus 247 ~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~ 326 (429)
T PRK01742 247 RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG 326 (429)
T ss_pred CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 34455789999999888764 576666544322334555666777788999999999877655 57888888875 22
Q ss_pred eEee---------e---------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc--c
Q psy11036 159 TVSS---------F---------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM--V 218 (239)
Q Consensus 159 ~~~~---------~---------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~--~ 218 (239)
.... + .+...+..||+.+...... ...+ ....+.|+|||++|+.++.++.+.+|++ .
T Consensus 327 ~~~~l~~~~~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~l-t~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~ 403 (429)
T PRK01742 327 GASLVGGRGYSAQISADGKTLVMINGDNVVKQDLTSGSTEVL-SSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSA 403 (429)
T ss_pred CeEEecCCCCCccCCCCCCEEEEEcCCCEEEEECCCCCeEEe-cCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC
Confidence 1111 1 1223356688766432221 1121 2356789999999999999998888876 3
Q ss_pred CCeeeEEec-CCCCeeeeEecC
Q psy11036 219 NFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 219 ~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+|+..+++. +++.+...+|||
T Consensus 404 ~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 404 DGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred CCCceEEccCCCCCCCCcccCC
Confidence 688888887 667899999998
No 159
>KOG2048|consensus
Probab=99.84 E-value=3e-18 Score=134.68 Aligned_cols=162 Identities=14% Similarity=0.184 Sum_probs=134.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-e--cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-V--NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~ 119 (239)
.+|+++|++. ..+.||.+-.||.|.+|+++..=.... + +....|.+++|++.++++-++.+|.|.-||+. +.++.
T Consensus 26 s~I~slA~s~-kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~-~lk~~ 103 (691)
T KOG2048|consen 26 SEIVSLAYSH-KSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLH-TLKQK 103 (691)
T ss_pred cceEEEEEec-cCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecc-cCcee
Confidence 7899999999 788899999999999999987643332 2 46678999999988877777779999999999 88888
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 199 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~ 199 (239)
..+..-.+.|.+++.+|.+..++.|+.||.+..++.....+ +....+...++.|.+++|+|+
T Consensus 104 ~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I------------------~~~r~l~rq~sRvLslsw~~~ 165 (691)
T KOG2048|consen 104 YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKI------------------TYKRSLMRQKSRVLSLSWNPT 165 (691)
T ss_pred EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceE------------------EEEeecccccceEEEEEecCC
Confidence 88888889999999999999999999999766666551111 111223344688999999999
Q ss_pred CCeEEEEcCCceEEEEEccCCeeeE
Q psy11036 200 GKRLISASLDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 200 ~~~l~s~s~d~~i~iwd~~~~~~~~ 224 (239)
+..+++|+.||.|++||..++..+.
T Consensus 166 ~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 166 GTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred ccEEEecccCceEEEEEcCCCceEE
Confidence 9999999999999999999988777
No 160
>KOG0650|consensus
Probab=99.84 E-value=1e-19 Score=141.24 Aligned_cols=195 Identities=25% Similarity=0.296 Sum_probs=151.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCc--EEEEeCCCcEEEEEccCC-----
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG--IFVTGGGLDVCIWDMLGG----- 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~~~d~~~~----- 115 (239)
+.|.++...| .+..|++|+.||+|+||.+.++.++.++...+.|.|++|+|.+. .|+++.+..+.+.+..-.
T Consensus 401 g~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~ 479 (733)
T KOG0650|consen 401 GLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEV 479 (733)
T ss_pred CeEEEEEecC-CcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhh
Confidence 9999999999 89999999999999999999999999998889999999999654 444444444555443100
Q ss_pred -------------------------------CeEEEEEeccCCceEEEEEcCCCCEEEEEecC---CeEEEEEcc-cceE
Q psy11036 116 -------------------------------GKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMT-LKTV 160 (239)
Q Consensus 116 -------------------------------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---~~i~i~d~~-~~~~ 160 (239)
..-+...-.|...|..+.|+..|.+|++...+ ..|.|+++. ....
T Consensus 480 ~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ 559 (733)
T KOG0650|consen 480 GPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQ 559 (733)
T ss_pred cchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccccccc
Confidence 00112333478899999999999999997654 578888886 2211
Q ss_pred eee---------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 161 SSF---------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 161 ~~~---------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.-| .....|++||+.. ++.+..+......|..++.+|.|.-|+.|+.|+.+..||+.-
T Consensus 560 ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~k-qelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldl 638 (733)
T KOG0650|consen 560 SPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSK-QELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDL 638 (733)
T ss_pred CchhhcCCceeEEEecCCCceEEEEeccceEEEehhH-HHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEccc
Confidence 111 3345589999876 555556666677899999999999999999999999999964
Q ss_pred -CeeeEEec-CCCCeeeeEecC
Q psy11036 220 -FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 220 -~~~~~~~~-~~~~v~~~~~sp 239 (239)
.++.+++. |...+++++||+
T Consensus 639 sskPyk~lr~H~~avr~Va~H~ 660 (733)
T KOG0650|consen 639 SSKPYKTLRLHEKAVRSVAFHK 660 (733)
T ss_pred CcchhHHhhhhhhhhhhhhhcc
Confidence 46778887 778999999885
No 161
>KOG2106|consensus
Probab=99.84 E-value=3.8e-18 Score=130.26 Aligned_cols=198 Identities=20% Similarity=0.247 Sum_probs=156.6
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
|.+.|.|+.+++|+ ..+++.+.... +++.|+.|+| .+ .++.|...|...+.|.++...+..
T Consensus 383 ~~T~gqdk~v~lW~--~~k~~wt~~~~---------------d~~~~~~fhp-sg-~va~Gt~~G~w~V~d~e~~~lv~~ 443 (626)
T KOG2106|consen 383 LLTCGQDKHVRLWN--DHKLEWTKIIE---------------DPAECADFHP-SG-VVAVGTATGRWFVLDTETQDLVTI 443 (626)
T ss_pred eeeccCcceEEEcc--CCceeEEEEec---------------CceeEeeccC-cc-eEEEeeccceEEEEecccceeEEE
Confidence 45678999999999 55655554444 7789999999 56 999999999999999999666655
Q ss_pred ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 81 VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
-...+++++++|+|+|.++|+|+ |+.|.+|.+...+....... .+..+|+.+.|++|++++.+-+.|-.|..|... .
T Consensus 444 ~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~ 523 (626)
T KOG2106|consen 444 HTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSEC 523 (626)
T ss_pred EecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccC
Confidence 54589999999999999999999 89999999987776665543 344799999999999999999999999999443 1
Q ss_pred ceEeee--------------------------------------ec--ceeEEEE--EccCCCEEEEEEecccCcEEEEE
Q psy11036 158 KTVSSF--------------------------------------TG--GLDVCIW--DMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 158 ~~~~~~--------------------------------------~~--~~~i~~~--d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
...... +| .+.+++| .......+.+++.+|.+-|++++
T Consensus 524 ~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~ 603 (626)
T KOG2106|consen 524 KQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVA 603 (626)
T ss_pred cccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEE
Confidence 111111 11 1224444 34455667788899999999999
Q ss_pred EccCCCeEEEEcCCceEEEEEc
Q psy11036 196 LASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
|..+...|++.+.|..|..|++
T Consensus 604 Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 604 FLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred EeeCCceEEecCCCceEEEEEe
Confidence 9998888888889999999986
No 162
>KOG1538|consensus
Probab=99.83 E-value=1.1e-19 Score=143.09 Aligned_cols=219 Identities=14% Similarity=0.179 Sum_probs=163.3
Q ss_pred CCCCCC------CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 1 MSHDLP------ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 1 fs~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
|.|||+ +..+.+||...|..++++++|+ +.|.|++|+. +|..+++|+.|..|.+|+-.
T Consensus 20 fkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHK--------------DtVycVAys~-dGkrFASG~aDK~VI~W~~k- 83 (1081)
T KOG1538|consen 20 FKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHK--------------DTVYCVAYAK-DGKRFASGSADKSVIIWTSK- 83 (1081)
T ss_pred ECCCCceEEEecCCEEEEEeCCCccccccccccc--------------ceEEEEEEcc-CCceeccCCCceeEEEeccc-
Confidence 567775 4789999999999999999999 9999999999 89999999999999999954
Q ss_pred CCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 75 PDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
-+-+..+.|...|.|+.|+|-...+++++-...-+|... .+.+...+ ....+.+++|..||++++.|-.+|+|.+-+
T Consensus 84 lEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~--qK~V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 84 LEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPE--QKSVSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred ccceeeeccCCeeeEeecCchHHHhhhcchhhccccChh--hhhHHhhh-hheeEEEeeecCCCcEEEEeccCceEEeec
Confidence 333455689999999999999999999886778889875 22232222 345788999999999999999999999987
Q ss_pred cccceEeee--eccee-------------------EEEEEccCC-------CEEEEEEecccCcEEEEEEccCCCeEEEE
Q psy11036 155 MTLKTVSSF--TGGLD-------------------VCIWDMLGG-------GKLLHKFTCHHKTVTSLCLASGGKRLISA 206 (239)
Q Consensus 155 ~~~~~~~~~--~~~~~-------------------i~~~d~~~~-------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 206 (239)
-.++.-..+ .|+.+ +.+-|...+ ++.+..-+.-.-...|+.+.++|.+++.|
T Consensus 161 k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiG 240 (1081)
T KOG1538|consen 161 KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLG 240 (1081)
T ss_pred CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEc
Confidence 653322222 22222 223232211 11111111122245688899999999999
Q ss_pred cCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 207 SLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 207 s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.|+.+.+|- +.|-.+.++. .+..|++++..|
T Consensus 241 Gsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~P 273 (1081)
T KOG1538|consen 241 GSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKP 273 (1081)
T ss_pred cCCCceEEEe-ecCeEEeeccccceeEEEEEEcc
Confidence 9999999995 5677777776 677888888776
No 163
>KOG2919|consensus
Probab=99.83 E-value=1e-19 Score=131.69 Aligned_cols=182 Identities=18% Similarity=0.249 Sum_probs=144.8
Q ss_pred CCCCCCC------CEEEEeeC-CCcceeeee--eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEe
Q psy11036 1 MSHDLPI------LIVALWDI-PSEAQVSTF--TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71 (239)
Q Consensus 1 fs~~~~d------g~i~vwd~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 71 (239)
|+|||.. ..|+++|+ +.|+....+ ..+. .....+-|.+++|+|.+...++.|+....+-||.
T Consensus 166 Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~---------k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~ 236 (406)
T KOG2919|consen 166 FSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKG---------KFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYN 236 (406)
T ss_pred ecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcc---------cccccceeeeeeccCCCCcceeeecccceeeeEe
Confidence 7788754 79999998 555432221 1120 0011277899999998778999999999999999
Q ss_pred CCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCC-ceEEE--EEcCCCCEEEEEe
Q psy11036 72 TRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHK-TVTSL--CLASGGKRLISAS 145 (239)
Q Consensus 72 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~i~~i--~~~~~~~~l~~~~ 145 (239)
-..+.+...+ +|.+.|+.+.|.++|..|++|. +..|..||++..+.++..+..|.. .-..| ...|++++|++|+
T Consensus 237 ~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~ 316 (406)
T KOG2919|consen 237 DDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGD 316 (406)
T ss_pred cCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccC
Confidence 9888888888 7999999999999999999998 789999999988888888877765 33344 4468899999999
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
.||.|++||++ .-+..+..+..|...+..++++|--.++|+++...
T Consensus 317 tdG~V~vwdlk-------------------~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 317 TDGSVRVWDLK-------------------DLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred CCccEEEEecC-------------------CCCCcccccccccccccceecCcccceeeeccCce
Confidence 99999999988 12445566677888999999999988889887653
No 164
>KOG2110|consensus
Probab=99.83 E-value=7.3e-18 Score=124.03 Aligned_cols=173 Identities=12% Similarity=0.208 Sum_probs=133.6
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec----C
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN----H 83 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~----~ 83 (239)
..+++++.+.+..+..+.-. .+|.++.++. +.|++.-.+ .|.|||+++.+.+.++. +
T Consensus 68 r~Lkv~~~Kk~~~ICe~~fp---------------t~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n 128 (391)
T KOG2110|consen 68 RKLKVVHFKKKTTICEIFFP---------------TSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPN 128 (391)
T ss_pred ceEEEEEcccCceEEEEecC---------------CceEEEEEcc---ceEEEEEcc-cEEEEecccceeehhhhccCCC
Confidence 34555665555555554443 6799999965 566666664 49999999999988873 4
Q ss_pred CCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE-EEEEcccce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA-KIYEMTLKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i-~i~d~~~~~ 159 (239)
...+.++..++.+.+++.-+ .|.|.+||.. +-++...+..|.+++.+++|+++|.+||+++..|+| ||+.+.
T Consensus 129 ~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~-nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~--- 204 (391)
T KOG2110|consen 129 PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTI-NLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVP--- 204 (391)
T ss_pred ccceEeeccCCCCceEEecCCCCCceEEEEEcc-cceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcC---
Confidence 55677777777777888766 3999999998 888999999999999999999999999999999874 566665
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecc--cCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCH--HKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
+++.+.+++.- ...|.+++|+|++++|++.|..++|.||.++..
T Consensus 205 -----------------~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 205 -----------------EGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred -----------------CccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 23444443321 235789999999999999999999999998654
No 165
>KOG0307|consensus
Probab=99.83 E-value=2.1e-20 Score=154.16 Aligned_cols=187 Identities=16% Similarity=0.240 Sum_probs=151.8
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
..+++|.|.|||+.+.+.-.++... ...+.|.+++|+....++|++++.+|.+.|||++..+++..+.
T Consensus 134 SGa~~geI~iWDlnn~~tP~~~~~~------------~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls 201 (1049)
T KOG0307|consen 134 SGADDGEILIWDLNKPETPFTPGSQ------------APPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS 201 (1049)
T ss_pred ccCCCCcEEEeccCCcCCCCCCCCC------------CCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc
Confidence 4578899999999875544444221 1228899999998777899999999999999999998888773
Q ss_pred -CC--CCEEEEEEecCCc-EEEEeC--C--CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEE
Q psy11036 83 -HG--SPVESVLCLPSGG-IFVTGG--G--LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIY 153 (239)
Q Consensus 83 -~~--~~v~~~~~~~~~~-~l~~~~--~--~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~ 153 (239)
+. ..+..+.|+|+.. .+++++ | -.|.+||+|....+++.+.+|...|.++.|++.+ +++++++.|+.|.+|
T Consensus 202 ~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~w 281 (1049)
T KOG0307|consen 202 DTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICW 281 (1049)
T ss_pred cCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEe
Confidence 22 3478999999753 444444 3 4599999998888999999999999999999966 899999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccCCe
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~ 221 (239)
+.+ +++.+..+......+..+.|+|... .++.++.||.|-||.+....
T Consensus 282 N~~--------------------tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 282 NPN--------------------TGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cCC--------------------CceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 988 4666666677778899999999655 78888999999999986543
No 166
>KOG1063|consensus
Probab=99.83 E-value=4e-19 Score=139.95 Aligned_cols=141 Identities=19% Similarity=0.312 Sum_probs=116.4
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
+|...|.+++.+|++++++++. . ..|++|+.. .-...+.+.+|+-.|+.++|+|||++|++.+.|.++.+|..
T Consensus 523 GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~-~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~ 601 (764)
T KOG1063|consen 523 GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTA-NWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV 601 (764)
T ss_pred cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEecc-chhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence 4778899999999999999987 2 348999987 66667789999999999999999999999999999999987
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC--eeeEE---ecCCC
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF--SPVHT---LDYPS 230 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~--~~~~~---~~~~~ 230 (239)
...... .......+.|..-|.+..|+|++.+++|+|.|++|++|..... +.+.. +++..
T Consensus 602 ~~~~~~----------------e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~ 665 (764)
T KOG1063|consen 602 QEDIKD----------------EFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSL 665 (764)
T ss_pred ecccch----------------hhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCC
Confidence 611111 1112336789999999999999999999999999999998776 44433 45788
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
+|++++|.|
T Consensus 666 aVTAv~~~~ 674 (764)
T KOG1063|consen 666 AVTAVAYLP 674 (764)
T ss_pred ceeeEEeec
Confidence 999999876
No 167
>KOG1445|consensus
Probab=99.82 E-value=1.9e-19 Score=141.04 Aligned_cols=139 Identities=14% Similarity=0.303 Sum_probs=112.2
Q ss_pred CCCCEEEEeeCCCc-ceee-eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC------
Q psy11036 5 LPILIVALWDIPSE-AQVS-TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD------ 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~------ 76 (239)
|+.|.|.||+++.. ++-. .+.+-. ....|+.++|.|.+.+.|++++.||.|++|.+..+.
T Consensus 600 g~gG~iai~el~~PGrLPDgv~p~l~------------Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~ 667 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLPDGVMPGLF------------NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEM 667 (1012)
T ss_pred CCCceEEEEEcCCCCCCCcccccccc------------cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccC
Confidence 55689999998653 2211 111110 005799999999999999999999999999987542
Q ss_pred -ceeee-cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 77 -PVMSV-NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 77 -~~~~~-~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
+...+ .|...|+.+.|+| ....|++++ |.+|++||+. .......+.+|.+.|..++|+|+|+.+++.+.||++++
T Consensus 668 tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~-~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV 746 (1012)
T KOG1445|consen 668 TPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA-NAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV 746 (1012)
T ss_pred CcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh-hhhhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence 22333 5889999999999 455666666 8999999999 77788889999999999999999999999999999999
Q ss_pred EEcc
Q psy11036 153 YEMT 156 (239)
Q Consensus 153 ~d~~ 156 (239)
|+.+
T Consensus 747 y~Pr 750 (1012)
T KOG1445|consen 747 YEPR 750 (1012)
T ss_pred eCCC
Confidence 9988
No 168
>KOG0771|consensus
Probab=99.82 E-value=8.1e-19 Score=130.88 Aligned_cols=177 Identities=17% Similarity=0.255 Sum_probs=135.2
Q ss_pred EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe-
Q psy11036 46 RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT- 123 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~- 123 (239)
.+++|+. ++..+++|+.||++|+|+..+...+... .|...|.++.|+|||+++++.+....+||+.+ .+..+.+..
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~-~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVN-TGAALARKTP 225 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEec-cCchhhhcCC
Confidence 6889999 8899999999999999998877666655 79999999999999999999884499999998 665555443
Q ss_pred -ccCCceEEEEEcCCC-----CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 124 -CHHKTVTSLCLASGG-----KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 124 -~~~~~i~~i~~~~~~-----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
........+.|+.++ ..++.....+.|+.|++. +|+-..-.+....+.. ...|++++.+
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~--------------~w~~~~~l~~~~~~~~-~~siSsl~VS 290 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDIS--------------LWSGSNFLRLRKKIKR-FKSISSLAVS 290 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEee--------------eeccccccchhhhhhc-cCcceeEEEc
Confidence 223356677887766 233333445667776654 4432211111112222 3469999999
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
++|++++.|+.||.|.|++..+.+.++-++ |...|+.+.|+|
T Consensus 291 ~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 291 DDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred CCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcC
Confidence 999999999999999999999999998887 888999999998
No 169
>KOG1274|consensus
Probab=99.82 E-value=1.8e-18 Score=140.08 Aligned_cols=173 Identities=17% Similarity=0.231 Sum_probs=142.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-Cceeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
...+.++|.| ++++|++++.||.|++|+.... +....+. +...|.+++.. +..|++++ +++|.+|... .++.-
T Consensus 14 ~G~t~i~~d~-~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fp-s~~~~ 89 (933)
T KOG1274|consen 14 GGLTLICYDP-DGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFP-SGEED 89 (933)
T ss_pred CceEEEEEcC-CCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCC-CCCcc
Confidence 7799999999 7889999999999999998766 4444454 77788888765 44777777 7999999997 55444
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 199 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~ 199 (239)
..+....-++.+++++.+|+++|.|+.|-.|++-++. +......+++|.++|.++.|+|+
T Consensus 90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~--------------------D~s~~~~lrgh~apVl~l~~~p~ 149 (933)
T KOG1274|consen 90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD--------------------DSSQEKVLRGHDAPVLQLSYDPK 149 (933)
T ss_pred ceeeeeeccceEEEEecCCcEEEeecCceeEEEEecc--------------------ccchheeecccCCceeeeeEcCC
Confidence 3444455789999999999999999999999999887 45556677999999999999999
Q ss_pred CCeEEEEcCCceEEEEEccCCeeeEEec---------CCCCeeeeEecC
Q psy11036 200 GKRLISASLDHHAKIYEMVNFSPVHTLD---------YPSPVLSIDVSM 239 (239)
Q Consensus 200 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~---------~~~~v~~~~~sp 239 (239)
+.+||+.+.||.|++||+.++....++. ....+.-++|+|
T Consensus 150 ~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~P 198 (933)
T KOG1274|consen 150 GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHP 198 (933)
T ss_pred CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecC
Confidence 9999999999999999999988776664 134577788887
No 170
>KOG3881|consensus
Probab=99.82 E-value=2.5e-18 Score=127.24 Aligned_cols=198 Identities=15% Similarity=0.155 Sum_probs=160.3
Q ss_pred CCCEEEEeeCCCcc----eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC--CeEEEEeCCCCCcee
Q psy11036 6 PILIVALWDIPSEA----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD--KTVNVYDTRSPDPVM 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~v~vw~~~~~~~~~ 79 (239)
++|.+.+|..+.+. ++..+..+ ..+..+.-++....++++|+.. ..+.+||++..+.+.
T Consensus 123 ~sG~l~~~~~k~~d~hss~l~~la~g---------------~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw 187 (412)
T KOG3881|consen 123 SSGNLQVRHDKSGDLHSSKLIKLATG---------------PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIW 187 (412)
T ss_pred cCCcEEEEeccCCccccccceeeecC---------------CceeeeccCCCCCceEecCchhcccceeeeecccceeee
Confidence 45888888876432 33444545 4577788888667788889998 889999999876554
Q ss_pred eec----------CCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 80 SVN----------HGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 80 ~~~----------~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
.-. .+-.++++.|-+. ...|+++. -+.+++||.+...+++..+.....+++++...|.++++++|..
T Consensus 188 ~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~ 267 (412)
T KOG3881|consen 188 SAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNT 267 (412)
T ss_pred eccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecc
Confidence 431 2345678899886 77888888 6999999999888999999988999999999999999999999
Q ss_pred CCeEEEEEcccceEeeeecceeEEEEEccCCCEEE-EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 147 DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLL-HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
-+.+..||++ .+... ..+++-.+.|+++..+|.+++|++++-|..|||+|+++.+++..
T Consensus 268 ~g~l~~FD~r--------------------~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~k 327 (412)
T KOG3881|consen 268 KGQLAKFDLR--------------------GGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHK 327 (412)
T ss_pred cchhheeccc--------------------CceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhh
Confidence 9999999988 23333 34788899999999999999999999999999999999888888
Q ss_pred ecCCCCeeeeEec
Q psy11036 226 LDYPSPVLSIDVS 238 (239)
Q Consensus 226 ~~~~~~v~~~~~s 238 (239)
....+.++++-+.
T Consensus 328 vYvKs~lt~il~~ 340 (412)
T KOG3881|consen 328 VYVKSRLTFILLR 340 (412)
T ss_pred hhhhccccEEEec
Confidence 7777777776653
No 171
>KOG1007|consensus
Probab=99.81 E-value=2.5e-18 Score=122.89 Aligned_cols=202 Identities=19% Similarity=0.207 Sum_probs=145.8
Q ss_pred CCEEEEeeCCCcce-eeeeeCCceeeccceeeccCCCCCeEEEEEec-CCCCEEEEeeCCCeEEEEeCCCCCceeee--c
Q psy11036 7 ILIVALWDIPSEAQ-VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP-VSSDIVISGSYDKTVNVYDTRSPDPVMSV--N 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~ 82 (239)
|..|.+|+++.+.. +..+..... .......++-+|+| .+++.+++. .|+++..||+++.++...+ .
T Consensus 143 dn~i~l~~l~ess~~vaev~ss~s---------~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dA 212 (370)
T KOG1007|consen 143 DNNIVLWSLDESSKIVAEVLSSES---------AEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDA 212 (370)
T ss_pred cCceEEEEcccCcchheeeccccc---------ccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhh
Confidence 67899999987655 444433210 01126788999999 456666664 5799999999999888877 4
Q ss_pred CCCCEEEEEEecCCcE-EEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEEcc---
Q psy11036 83 HGSPVESVLCLPSGGI-FVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMT--- 156 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~-l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d~~--- 156 (239)
|...|..+.|+|+.+. |++++ ||.|++||.+++..++.++.+|..-|.++.|+|. .+++++++.|..|.+|...
T Consensus 213 Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svS 292 (370)
T KOG1007|consen 213 HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVS 292 (370)
T ss_pred hcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccc
Confidence 8899999999998765 45555 6999999999999999999999999999999994 4688899999999999876
Q ss_pred cceEeeeecce-eEEEEEccC-----CCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEcc
Q psy11036 157 LKTVSSFTGGL-DVCIWDMLG-----GGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMV 218 (239)
Q Consensus 157 ~~~~~~~~~~~-~i~~~d~~~-----~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~ 218 (239)
.+....+..+. +-..-|.+. ....+.++..|...|.+++||.-. -++|+-|.||++.|=.+.
T Consensus 293 SE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 293 SEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred cccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 22211110000 000000000 112345678899999999999844 456888999999886553
No 172
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.81 E-value=1.7e-16 Score=125.77 Aligned_cols=197 Identities=27% Similarity=0.487 Sum_probs=159.0
Q ss_pred CCCCEEEEeeCCC-cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPS-EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-DKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~vw~~~~~~~~~~~- 81 (239)
..++.+.+||... ......+..|. ..|..++|+| ++..+++++. |+.+++|++..+..+..+
T Consensus 131 ~~d~~~~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
T COG2319 131 SLDGTVKLWDLSTPGKLIRTLEGHS--------------ESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPLSTLA 195 (466)
T ss_pred CCCccEEEEEecCCCeEEEEEecCc--------------ccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceEEeec
Confidence 3488999999987 78888899998 8999999999 6778888875 999999999987777777
Q ss_pred cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEE-EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc
Q psy11036 82 NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLH-KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~ 158 (239)
.|...+.+++|+|++. .+++++ |+.+.+||.. .+.... .+..|.... ...|+|++..+++++.|+.+++|+.+..
T Consensus 196 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 273 (466)
T COG2319 196 GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS-TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSS 273 (466)
T ss_pred cCCCceEEEEEcCCcceEEEEecCCCcEEEEECC-CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCC
Confidence 5899999999999998 444424 8999999887 666666 678888775 4489999988999999999999998811
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec---CCCCeeee
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD---YPSPVLSI 235 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~v~~~ 235 (239)
......+..|...+.++.|+|++..+++++.|+.+.+|+..+........ +...+..+
T Consensus 274 -------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
T COG2319 274 -------------------SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSL 334 (466)
T ss_pred -------------------CcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEE
Confidence 11122225678899999999988888889889999999998877665553 44457777
Q ss_pred Ee
Q psy11036 236 DV 237 (239)
Q Consensus 236 ~~ 237 (239)
.|
T Consensus 335 ~~ 336 (466)
T COG2319 335 SF 336 (466)
T ss_pred EE
Confidence 66
No 173
>KOG1273|consensus
Probab=99.80 E-value=7.8e-18 Score=121.74 Aligned_cols=175 Identities=15% Similarity=0.211 Sum_probs=129.5
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~ 122 (239)
..|+.|++ .|.+|++|..||.|.+||+.+....+.+ .|..+|++++|+++|+.|++++ |..+.+||+. .+.+++.+
T Consensus 26 a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~-~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLL-KGSPLKRI 103 (405)
T ss_pred cceEEecc-CcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEecc-CCCceeEE
Confidence 77999999 8999999999999999999999877777 6999999999999999999999 8999999999 77788888
Q ss_pred eccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC
Q psy11036 123 TCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201 (239)
Q Consensus 123 ~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 201 (239)
. ...+|....|+|..+ ..++.-.+..-.+-++....-..+ .... .. .-...-.+..|.+.|+
T Consensus 104 r-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~L---------p~d~-d~------dln~sas~~~fdr~g~ 166 (405)
T KOG1273|consen 104 R-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVL---------PKDD-DG------DLNSSASHGVFDRRGK 166 (405)
T ss_pred E-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeec---------cCCC-cc------ccccccccccccCCCC
Confidence 7 678999999999553 333332333333333331000000 0000 00 0011112336889999
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEecC--CCCeeeeEec
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTLDY--PSPVLSIDVS 238 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~s 238 (239)
++++|...|.+.++|..+.+++..++. ...|..+.++
T Consensus 167 yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s 205 (405)
T KOG1273|consen 167 YIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVS 205 (405)
T ss_pred EEEEecCcceEEEEecchheeeeeeeechheeeeEEEEe
Confidence 999999999999999999999988873 2567666654
No 174
>KOG2394|consensus
Probab=99.80 E-value=1.5e-18 Score=133.32 Aligned_cols=164 Identities=15% Similarity=0.202 Sum_probs=123.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~ 122 (239)
..|+|+.|-|.+..+++.+-.+|.+.+||.... ....-.+....+++..+... .|.-.....++..+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~-------~~~t~p~~~~~k~~~~f~i~------t~ksk~~rNPv~~w 286 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIV-------CGATAPSYQALKDGDQFAIL------TSKSKKTRNPVARW 286 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeecccc-------ccCCCCcccccCCCCeeEEe------eeeccccCCcccee
Confidence 789999999976778888889999999997211 01111111223345444432 22222122445555
Q ss_pred eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe
Q psy11036 123 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 202 (239)
Q Consensus 123 ~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 202 (239)
.--.+.|..++|+|||++||+.+.||.++|||.. ..+++..++..-+...|++|||||++
T Consensus 287 ~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fd--------------------t~eLlg~mkSYFGGLLCvcWSPDGKy 346 (636)
T KOG2394|consen 287 HIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFD--------------------TQELLGVMKSYFGGLLCVCWSPDGKY 346 (636)
T ss_pred EeccccccceeEcCCCceEEEEecCceEEEeecc--------------------HHHHHHHHHhhccceEEEEEcCCccE
Confidence 5456689999999999999999999999999998 33444444555678999999999999
Q ss_pred EEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 203 LISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 203 l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+++|++|-.|.||.+..++.+..-+ |.+.|..++|.|
T Consensus 347 IvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 347 IVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 9999999999999999999999888 999999999976
No 175
>KOG0771|consensus
Probab=99.80 E-value=1.6e-18 Score=129.38 Aligned_cols=180 Identities=19% Similarity=0.200 Sum_probs=140.4
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-- 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-- 81 (239)
-|.||.+|||+.++...+.....|. ..|.++.|+| ++.+|++-+.| ..+||+++++..+...
T Consensus 162 gg~dg~lRv~~~Ps~~t~l~e~~~~--------------~eV~DL~FS~-dgk~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 162 GGTDGTLRVWEWPSMLTILEEIAHH--------------AEVKDLDFSP-DGKFLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred ccccceEEEEecCcchhhhhhHhhc--------------CccccceeCC-CCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence 3679999999998888888888887 9999999999 89999999999 8999999999776655
Q ss_pred -cCCCCEEEEEEecCC---cEEEEeC---CCcEEEEEccCCCe----EEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 82 -NHGSPVESVLCLPSG---GIFVTGG---GLDVCIWDMLGGGK----LLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~---~~l~~~~---~~~i~~~d~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
........+.|+.++ .+.+++. .+.|..|++..... +..+.......|++++.+++|++++.|+.||.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 244567788888766 3333333 36777777652222 222222334579999999999999999999999
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEE-EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLL-HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.|++.. ..+.+ ..-+.|...|+.+.|+||.+++++.+.|....+..+.-
T Consensus 306 ai~~~~--------------------~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 306 AIYDAK--------------------SLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEEec--------------------eeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999987 22222 23367999999999999999999999999998887743
No 176
>KOG1034|consensus
Probab=99.80 E-value=3e-17 Score=119.22 Aligned_cols=195 Identities=17% Similarity=0.255 Sum_probs=145.7
Q ss_pred CCeEEEEEecC---CCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPV---SSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~~ 116 (239)
+....++|+-+ +..+++.|+.-|.|+|.|+.+++....+ +|...|..+.++|.. +++++++ |..|++|+++ +.
T Consensus 90 Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~-~~ 168 (385)
T KOG1034|consen 90 ESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ-TD 168 (385)
T ss_pred cceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc-CC
Confidence 67888888763 2458899999999999999999988877 799999999999965 4666666 8999999999 77
Q ss_pred eEEEEE---eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc-------eEeee-----------------------
Q psy11036 117 KLLHKF---TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-------TVSSF----------------------- 163 (239)
Q Consensus 117 ~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~-------~~~~~----------------------- 163 (239)
..+..+ .+|...|.++.|+++|.+|++++.|.++++|++..+ ....+
T Consensus 169 ~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~d 248 (385)
T KOG1034|consen 169 VCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTD 248 (385)
T ss_pred eEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccc
Confidence 777665 479999999999999999999999999999998711 11000
Q ss_pred -------------------ecceeEEEEEccCC-------------CEEEEEEecccCcEEEEEE--ccCCCeEEEEcCC
Q psy11036 164 -------------------TGGLDVCIWDMLGG-------------GKLLHKFTCHHKTVTSLCL--ASGGKRLISASLD 209 (239)
Q Consensus 164 -------------------~~~~~i~~~d~~~~-------------~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~s~d 209 (239)
+.++.|..|-.-.- ...+..+.-....|.-+.| .|-++.||.|...
T Consensus 249 iHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~ 328 (385)
T KOG1034|consen 249 IHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQS 328 (385)
T ss_pred cccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCC
Confidence 34556888876111 1123334444455666654 4568899999999
Q ss_pred ceEEEEEccCCeee--EEec---CCCCeeeeEec
Q psy11036 210 HHAKIYEMVNFSPV--HTLD---YPSPVLSIDVS 238 (239)
Q Consensus 210 ~~i~iwd~~~~~~~--~~~~---~~~~v~~~~~s 238 (239)
|.|.+||++..++. .++. ....|...+||
T Consensus 329 g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS 362 (385)
T KOG1034|consen 329 GKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFS 362 (385)
T ss_pred CcEEEEECCCCCCccCceEEeccccceeeeeeec
Confidence 99999999887663 2222 33466666665
No 177
>KOG0644|consensus
Probab=99.80 E-value=4.2e-20 Score=148.33 Aligned_cols=189 Identities=18% Similarity=0.338 Sum_probs=156.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..|+|+.|.. .+.++++|+.|..++||.+++..+.... +|.+.++.++.+.+..++++++ |..|++|.++ .+.++.
T Consensus 191 naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~-~~~pvs 268 (1113)
T KOG0644|consen 191 NAVYCAIFDR-TGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP-DGAPVS 268 (1113)
T ss_pred hheeeeeecc-ccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC-CCchHH
Confidence 8999999999 8999999999999999999999998888 7999999999998888888888 7899999999 899999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc-eEee--------------e----------------------
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-TVSS--------------F---------------------- 163 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~--------------~---------------------- 163 (239)
.+.+|.+.|++++|+|-- +.+.||++++||.+.. .+.. +
T Consensus 269 vLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e 344 (1113)
T KOG0644|consen 269 VLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHE 344 (1113)
T ss_pred HHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccch
Confidence 999999999999999964 7788999999998711 1111 0
Q ss_pred --------------ecc-------------eeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEE
Q psy11036 164 --------------TGG-------------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIY 215 (239)
Q Consensus 164 --------------~~~-------------~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iw 215 (239)
++. -.+++|++.+ ++..+.+.+|...+..+.++| |.+...+++.||...||
T Consensus 345 ~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~-g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iw 423 (1113)
T KOG0644|consen 345 FEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYT-GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIW 423 (1113)
T ss_pred hhHhhhhccceEEEeccccccccceeeeeeeEeeeeeccc-chhhhhhcccccceeeeeecCCCcHhhhhccCCCceEee
Confidence 111 1166788765 677788889999999999999 55666789999999999
Q ss_pred EccCCeeeEEec-CCCCeeeeEec
Q psy11036 216 EMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 216 d~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
|+-.|.+++.+. ....+..-+||
T Consensus 424 di~eg~pik~y~~gh~kl~d~kFS 447 (1113)
T KOG0644|consen 424 DIWEGIPIKHYFIGHGKLVDGKFS 447 (1113)
T ss_pred ecccCCcceeeecccceeeccccC
Confidence 999998887665 33445555554
No 178
>KOG0649|consensus
Probab=99.80 E-value=4e-17 Score=114.24 Aligned_cols=199 Identities=15% Similarity=0.191 Sum_probs=143.6
Q ss_pred CCCCEEEEeeCCCc----------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 5 LPILIVALWDIPSE----------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 5 ~~dg~i~vwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
..+|+|.+..+.+. ..+-..++|. ++|+.++|+. .+|++|+. |.|+=|..+.
T Consensus 29 n~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahd--------------gpiy~~~f~d---~~Lls~gd-G~V~gw~W~E 90 (325)
T KOG0649|consen 29 NLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHD--------------GPIYYLAFHD---DFLLSGGD-GLVYGWEWNE 90 (325)
T ss_pred cCCCeEEEEEehhhhccccCCCCCcceeeccccC--------------CCeeeeeeeh---hheeeccC-ceEEEeeehh
Confidence 46799999987542 1233445666 9999999974 57777765 9999998754
Q ss_pred CCc------eeee--c------CCCCEEEEEEecC-CcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC
Q psy11036 75 PDP------VMSV--N------HGSPVESVLCLPS-GGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 139 (239)
Q Consensus 75 ~~~------~~~~--~------~~~~v~~~~~~~~-~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 139 (239)
... .... + .-..|+++...|. +..+.+|+|+.++-||++ +++..+++++|...|.++.--....
T Consensus 91 ~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE-~G~i~r~~rGHtDYvH~vv~R~~~~ 169 (325)
T KOG0649|consen 91 EEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLE-DGRIQREYRGHTDYVHSVVGRNANG 169 (325)
T ss_pred hhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEec-CCEEEEEEcCCcceeeeeeecccCc
Confidence 322 1111 1 2246889999985 556666779999999999 9999999999999999998855556
Q ss_pred EEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 140 RLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.+++|++||++++||.+ .+.+..+. . .+....++.|. ..|-+++.+ ..+|++|+ ...+.+|.+
T Consensus 170 qilsG~EDGtvRvWd~kt~k~v~~ie------~------yk~~~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhL 234 (325)
T KOG0649|consen 170 QILSGAEDGTVRVWDTKTQKHVSMIE------P------YKNPNLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHL 234 (325)
T ss_pred ceeecCCCccEEEEeccccceeEEec------c------ccChhhcCcccCceeEEEecc--CceEEecC-CCceeEEec
Confidence 78999999999999999 55544440 0 11111123333 346666654 56888775 457999999
Q ss_pred cCCeeeEEecCCCCeeeeEe
Q psy11036 218 VNFSPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 218 ~~~~~~~~~~~~~~v~~~~~ 237 (239)
+..++...++.+.++..+.|
T Consensus 235 rsse~t~vfpipa~v~~v~F 254 (325)
T KOG0649|consen 235 RSSESTCVFPIPARVHLVDF 254 (325)
T ss_pred cCCCceEEEecccceeEeee
Confidence 99999999998888887776
No 179
>KOG1009|consensus
Probab=99.80 E-value=2.2e-18 Score=128.12 Aligned_cols=162 Identities=19% Similarity=0.299 Sum_probs=135.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---------eee-cCCCCEEEEEEecCCcEEEEeCC-CcEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV---------MSV-NHGSPVESVLCLPSGGIFVTGGG-LDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~---------~~~-~~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d 111 (239)
.+|.++.|.++..+.+++|+.|..|++|-+.....- ..+ .|...|+++.|+|+|..+++|+| |.+.+|.
T Consensus 14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk 93 (434)
T KOG1009|consen 14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWK 93 (434)
T ss_pred CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEE
Confidence 789999999955569999999999999998654322 123 58999999999999999999995 9999997
Q ss_pred ccC-------C--------CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccC
Q psy11036 112 MLG-------G--------GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176 (239)
Q Consensus 112 ~~~-------~--------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~ 176 (239)
... + ......+.+|...|..++|+|++.++++++.|+.+++||+.
T Consensus 94 ~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~-------------------- 153 (434)
T KOG1009|consen 94 QGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH-------------------- 153 (434)
T ss_pred ecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec--------------------
Confidence 651 0 12345567899999999999999999999999999999998
Q ss_pred CCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeE
Q psy11036 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 177 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~ 224 (239)
.++....+..|...+..++|.|-++++++-+.|...+.+.+...+.++
T Consensus 154 ~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~ 201 (434)
T KOG1009|consen 154 AGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIK 201 (434)
T ss_pred cceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeee
Confidence 577777778999999999999999999999999988888776544433
No 180
>KOG1063|consensus
Probab=99.79 E-value=1.8e-18 Score=136.26 Aligned_cols=180 Identities=14% Similarity=0.114 Sum_probs=138.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD-----KTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~ 115 (239)
-.|++++.+| ++++++++... ..|++|+..+-..+..+ .|.-.|+.++|+|++++|++.+ |+++.+|....+
T Consensus 526 yEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~ 604 (764)
T KOG1063|consen 526 YEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQED 604 (764)
T ss_pred eeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecc
Confidence 7899999999 89999998765 36899999988777766 7999999999999999999999 999999988633
Q ss_pred CeE---EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 116 GKL---LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 116 ~~~---~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
... ....+.|..-|.+..|+|++.+++|++.|.+|++|........ ..+......+..+|+
T Consensus 605 ~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~----------------~i~~~a~~~~~~aVT 668 (764)
T KOG1063|consen 605 IKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDK----------------YISRFACLKFSLAVT 668 (764)
T ss_pred cchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhh----------------hhhhhchhccCCcee
Confidence 222 2336789999999999999999999999999999988711000 001112345678899
Q ss_pred EEEEcc-C----CCeEEEEcCCceEEEEEccC-------Ce------eeEEecCCCCeeeeEecC
Q psy11036 193 SLCLAS-G----GKRLISASLDHHAKIYEMVN-------FS------PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 193 ~~~~s~-~----~~~l~s~s~d~~i~iwd~~~-------~~------~~~~~~~~~~v~~~~~sp 239 (239)
.+++.| + +..++.|-..|.|.+|.... +. .-..+.+.+.|+-+.|+|
T Consensus 669 Av~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p 733 (764)
T KOG1063|consen 669 AVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRP 733 (764)
T ss_pred eEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEecc
Confidence 999987 2 23678888999999998651 11 111222556788888876
No 181
>KOG1272|consensus
Probab=99.79 E-value=8.1e-20 Score=137.89 Aligned_cols=195 Identities=19% Similarity=0.232 Sum_probs=170.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
|+.|.|..+|..++++..++... ..|.++.|.. +.++++++ ....+.|||- .|..+..+.-.
T Consensus 148 GrKGHlAa~Dw~t~~L~~Ei~v~---------------Etv~Dv~~LH-neq~~AVA-QK~y~yvYD~-~GtElHClk~~ 209 (545)
T KOG1272|consen 148 GRKGHLAAFDWVTKKLHFEINVM---------------ETVRDVTFLH-NEQFFAVA-QKKYVYVYDN-NGTELHCLKRH 209 (545)
T ss_pred CCccceeeeecccceeeeeeehh---------------hhhhhhhhhc-chHHHHhh-hhceEEEecC-CCcEEeehhhc
Confidence 56689999999999998888877 6799999998 67777765 5578999994 58888888777
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
.+|..+.|.|..-+|++++ .|.++.-|+. .++.+..+....+.+..++-+|-...+-+|...|+|.+|...
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS-~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~------- 281 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVS-TGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN------- 281 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeec-hhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC-------
Confidence 8899999999888888888 4999999998 899999998888999999999999999999999999999977
Q ss_pred ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 164 ~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
..+++..+..|.++|.++++.++|+|++|++.|..++|||++....+.++..+.+...+++|
T Consensus 282 -------------skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~S 343 (545)
T KOG1272|consen 282 -------------SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLS 343 (545)
T ss_pred -------------CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccc
Confidence 56777788899999999999999999999999999999999998888887766677776665
No 182
>KOG1587|consensus
Probab=99.78 E-value=7.3e-17 Score=129.16 Aligned_cols=205 Identities=17% Similarity=0.188 Sum_probs=148.3
Q ss_pred CCEEEEeeCCCc-ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc--eeee--
Q psy11036 7 ILIVALWDIPSE-AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP--VMSV-- 81 (239)
Q Consensus 7 dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~-- 81 (239)
++.+.+|++++. .+...+... ..|++++|+|.+.++++.|..+|+|.+||++.+.. ...+
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~~---------------s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~ 285 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLESP---------------SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSA 285 (555)
T ss_pred CceEEEEecCCCCCceEEEecC---------------CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCccccc
Confidence 358999999876 455555544 78999999999999999999999999999987765 2222
Q ss_pred ---cCCCCEEEEEEecCCcE--EEEeC-CCcEEEEEccCCCeEEEEE-----e------ccCCceEEEEEcC-CCCEEEE
Q psy11036 82 ---NHGSPVESVLCLPSGGI--FVTGG-GLDVCIWDMLGGGKLLHKF-----T------CHHKTVTSLCLAS-GGKRLIS 143 (239)
Q Consensus 82 ---~~~~~v~~~~~~~~~~~--l~~~~-~~~i~~~d~~~~~~~~~~~-----~------~~~~~i~~i~~~~-~~~~l~~ 143 (239)
.|..+++.+.|.++..- +++++ ||.|..|+++.-..+...+ . .....+++++|.+ +-..++.
T Consensus 286 ~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV 365 (555)
T KOG1587|consen 286 LEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV 365 (555)
T ss_pred ccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE
Confidence 48899999999875433 66665 9999999987433322211 1 1223688999988 4478999
Q ss_pred EecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc-CCe
Q psy11036 144 ASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFS 221 (239)
Q Consensus 144 ~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~ 221 (239)
|+.+|.|.--+-. .+.-... ..+....+..|.++|.++.++|=+..++..+.|.+|+||... ...
T Consensus 366 GTe~G~v~~~~r~g~~~~~~~-------------~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~ 432 (555)
T KOG1587|consen 366 GTEEGKVYKGCRKGYTPAPEV-------------SYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIAS 432 (555)
T ss_pred EcCCcEEEEEeccCCcccccc-------------cccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCC
Confidence 9999998764433 1100000 013344556788999999999966555544459999999988 778
Q ss_pred eeEEec-CCCCeeeeEecC
Q psy11036 222 PVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 222 ~~~~~~-~~~~v~~~~~sp 239 (239)
++..+. ....+++++|||
T Consensus 433 Pl~~~~~~~~~v~~vaWSp 451 (555)
T KOG1587|consen 433 PLLSLDSSPDYVTDVAWSP 451 (555)
T ss_pred cchhhhhccceeeeeEEcC
Confidence 888777 666799999998
No 183
>KOG0650|consensus
Probab=99.78 E-value=3.7e-18 Score=132.74 Aligned_cols=183 Identities=19% Similarity=0.257 Sum_probs=150.6
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+++....|.|+++...+...-|+... +.|.++.|+| ...+|++++. ..|++||+..+..+..+
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~ksk--------------G~vq~v~FHP-s~p~lfVaTq-~~vRiYdL~kqelvKkL~ 604 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFRKSK--------------GLVQRVKFHP-SKPYLFVATQ-RSVRIYDLSKQELVKKLL 604 (733)
T ss_pred cCCCcceEEEEecccccccCchhhcC--------------CceeEEEecC-CCceEEEEec-cceEEEehhHHHHHHHHh
Confidence 45666788888887666555565555 8899999999 6777777765 67999999987777766
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
.....|..++.+|.|..++.++ |+.+..+|+....++.+++..|...+++++|++.-.++++|+.||++.||--.
T Consensus 605 tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~---- 680 (733)
T KOG0650|consen 605 TGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGM---- 680 (733)
T ss_pred cCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeee----
Confidence 5667899999999999999998 89999999997888999999999999999999999999999999999998644
Q ss_pred eeeecceeEEEEE-ccC--CCEEEEEEecccCc----EEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 161 SSFTGGLDVCIWD-MLG--GGKLLHKFTCHHKT----VTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 161 ~~~~~~~~i~~~d-~~~--~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
+|+ +.. ---++..+.+|... |....|+|...+|++++.||+|++|
T Consensus 681 ----------VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 681 ----------VYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ----------eehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 111 000 12456677888765 8899999999999999999999998
No 184
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.77 E-value=2.4e-16 Score=111.91 Aligned_cols=154 Identities=19% Similarity=0.309 Sum_probs=110.0
Q ss_pred EEEEEecCCCCEEEE-ee---------CCCeEEEEeCCC-CCceeee--cCCCCEEEEEEecCCcEEEEeC---CCcEEE
Q psy11036 46 RAGTVSPVSSDIVIS-GS---------YDKTVNVYDTRS-PDPVMSV--NHGSPVESVLCLPSGGIFVTGG---GLDVCI 109 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s-~~---------~dg~v~vw~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~---~~~i~~ 109 (239)
..+.|+| .|+.|+. .. .-+...+|.++. +.+...+ ...++|.+++|+|++..+++.. ...+.+
T Consensus 9 ~~~~W~~-~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQP-SGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecc-cCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 4688999 5655443 33 113455666532 2333433 4556799999999999876553 478999
Q ss_pred EEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC---CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 110 ~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
||++ .+.+..+. ...+..+.|+|+|+++++++.+ |.+.+||.+ ..+.+....
T Consensus 88 yd~~--~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~--------------------~~~~i~~~~- 142 (194)
T PF08662_consen 88 YDVK--GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR--------------------KKKKISTFE- 142 (194)
T ss_pred EcCc--ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC--------------------CCEEeeccc-
Confidence 9996 66666664 5677899999999999998754 568888877 344444443
Q ss_pred ccCcEEEEEEccCCCeEEEEcC------CceEEEEEccCCeeeEEec
Q psy11036 187 HHKTVTSLCLASGGKRLISASL------DHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~ 227 (239)
...++.++|+|||++|+++.. |..++||+. +|+.+.+..
T Consensus 143 -~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~ 187 (194)
T PF08662_consen 143 -HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKP 187 (194)
T ss_pred -cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEecc
Confidence 234789999999999998864 788999998 577777655
No 185
>KOG1188|consensus
Probab=99.77 E-value=1.7e-17 Score=120.94 Aligned_cols=164 Identities=16% Similarity=0.209 Sum_probs=122.0
Q ss_pred CEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCCeEE-EEEeccC-Cce
Q psy11036 56 DIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGKLL-HKFTCHH-KTV 129 (239)
Q Consensus 56 ~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~-~~i 129 (239)
..++++..+|.|++||..+++.+..+ .++..+..++|.. ....+.+++ ||+|++||+|...+.. .....+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 56888889999999999999888888 5788888899877 455666666 8999999999544332 2333444 466
Q ss_pred EEEEEcCCCCEEEEEec----CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE-EecccCcEEEEEEcc-CCCeE
Q psy11036 130 TSLCLASGGKRLISASL----DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLAS-GGKRL 203 (239)
Q Consensus 130 ~~i~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~-~~~~l 203 (239)
.+++.+-.++.+++|.. +-.+.+||++ ...+++.. ...|...|++++|+| +.++|
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR-------------------~~qq~l~~~~eSH~DDVT~lrFHP~~pnlL 181 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVR-------------------SEQQLLRQLNESHNDDVTQLRFHPSDPNLL 181 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEec-------------------cccchhhhhhhhccCcceeEEecCCCCCeE
Confidence 77777667778888753 4455555555 44443333 356999999999999 56799
Q ss_pred EEEcCCceEEEEEccCC----eeeEEecCCCCeeeeEec
Q psy11036 204 ISASLDHHAKIYEMVNF----SPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 204 ~s~s~d~~i~iwd~~~~----~~~~~~~~~~~v~~~~~s 238 (239)
+|||.||.|.+||++.- .++..+++.+.|..+.|+
T Consensus 182 lSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~ 220 (376)
T KOG1188|consen 182 LSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWL 220 (376)
T ss_pred EeecccceEEeeecCCCcchhhHHHhhcccceeeeeeee
Confidence 99999999999999643 346667788888888875
No 186
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.77 E-value=1.3e-15 Score=120.61 Aligned_cols=199 Identities=25% Similarity=0.436 Sum_probs=155.1
Q ss_pred CCCCEEEEeeCCCcc-eeeeeeCCceeeccceeeccCCCCCeEEEEE-ecCCCC-EEEEeeC-CCeEEEEeCCC-CCcee
Q psy11036 5 LPILIVALWDIPSEA-QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV-SPVSSD-IVISGSY-DKTVNVYDTRS-PDPVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-~l~s~~~-dg~v~vw~~~~-~~~~~ 79 (239)
+.|+.+.+|+...+. ....+..... ..+..+.+ .+ ++. .++..+. |+.+.+|+... .....
T Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 149 (466)
T COG2319 84 SSDGTIKLWDLDNGEKLIKSLEGLHD-------------SSVSKLALSSP-DGNSILLASSSLDGTVKLWDLSTPGKLIR 149 (466)
T ss_pred cCCCcEEEEEcCCCceeEEEEeccCC-------------CceeeEEEECC-CcceEEeccCCCCccEEEEEecCCCeEEE
Confidence 358999999998876 6667766430 26777777 77 444 5555444 99999999987 55555
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEc
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEM 155 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~ 155 (239)
.+ .|...+..++|+|++..+++++ ++.+++|++. ....+..+..|...+.+++|+|++. .+++++.|+.+++||.
T Consensus 150 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~ 228 (466)
T COG2319 150 TLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR-TGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL 228 (466)
T ss_pred EEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcC-CCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEEC
Confidence 55 7889999999999998887776 7999999998 5778888888999999999999998 5555589999999976
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEE-EEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee-eEEe-cCCCCe
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLH-KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP-VHTL-DYPSPV 232 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~-~~~~~v 232 (239)
. ...... .+..|.... ...|+|++.++++++.|+.+++|++..... +..+ .+...+
T Consensus 229 ~--------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v 287 (466)
T COG2319 229 S--------------------TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSV 287 (466)
T ss_pred C--------------------CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccE
Confidence 6 233333 466777765 448999998999999999999999987664 4444 367789
Q ss_pred eeeEecC
Q psy11036 233 LSIDVSM 239 (239)
Q Consensus 233 ~~~~~sp 239 (239)
.++.|+|
T Consensus 288 ~~~~~~~ 294 (466)
T COG2319 288 LSVAFSP 294 (466)
T ss_pred EEEEECC
Confidence 9988876
No 187
>KOG1963|consensus
Probab=99.76 E-value=1.7e-16 Score=128.19 Aligned_cols=203 Identities=19% Similarity=0.205 Sum_probs=148.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC--CEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS--DIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+..|.||...+++++..+..|. .+++.+.+.|... .++++++.||.|++||...+..++++...
T Consensus 36 ~~~V~VyS~~Tg~~i~~l~~~~--------------a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~ 101 (792)
T KOG1963|consen 36 GNFVKVYSTATGECITSLEDHT--------------APLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNN 101 (792)
T ss_pred CCEEEEEecchHhhhhhccccc--------------CccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecC
Confidence 4789999999999999999999 9999999998544 46779999999999999888776666433
Q ss_pred CCEEEEEE-----------------------------------------------------------ecCCcEEEEeCCC
Q psy11036 85 SPVESVLC-----------------------------------------------------------LPSGGIFVTGGGL 105 (239)
Q Consensus 85 ~~v~~~~~-----------------------------------------------------------~~~~~~l~~~~~~ 105 (239)
.++.++.+ ++.|.+.....+.
T Consensus 102 ~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~ 181 (792)
T KOG1963|consen 102 LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMC 181 (792)
T ss_pred CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEee
Confidence 33333222 2222222222233
Q ss_pred cEEEEEccCCCeEEEE---EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEE
Q psy11036 106 DVCIWDMLGGGKLLHK---FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLH 182 (239)
Q Consensus 106 ~i~~~d~~~~~~~~~~---~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 182 (239)
.+.+|+.....+.... -..|.-.+++.+++|.+++++++..||.|.+|.--+. ........
T Consensus 182 ~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~----------------~~~~~t~t 245 (792)
T KOG1963|consen 182 KIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGS----------------SDDSETCT 245 (792)
T ss_pred eEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccc----------------ccccccce
Confidence 3445554421111100 1136667899999999999999999999999964310 01234455
Q ss_pred EEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 183 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 183 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.++-|...|.+++|+++|.+|++|+..|.+.+|.+.++++..--...++|..+.+||
T Consensus 246 ~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ 302 (792)
T KOG1963|consen 246 LLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSP 302 (792)
T ss_pred EEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcC
Confidence 678899999999999999999999999999999999998433333888999999987
No 188
>KOG0649|consensus
Probab=99.76 E-value=9.7e-17 Score=112.32 Aligned_cols=162 Identities=15% Similarity=0.249 Sum_probs=128.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----------Cceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----------DPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d 111 (239)
..|..-+++| .+++|++|..+|+|.++.+.+. ..+... .|.+++..++|. ..+|++++||.|+-|.
T Consensus 11 ~tvf~qa~sp-~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG~V~gw~ 87 (325)
T KOG0649|consen 11 NTVFAQAISP-SKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDGLVYGWE 87 (325)
T ss_pred HHHHHHhhCC-cceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCceEEEee
Confidence 3466778899 8999999999999999987632 122222 599999999998 6688899999999887
Q ss_pred ccCCCe------EEEEE-ecc-----CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCE
Q psy11036 112 MLGGGK------LLHKF-TCH-----HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK 179 (239)
Q Consensus 112 ~~~~~~------~~~~~-~~~-----~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~ 179 (239)
-+...+ ..... ..| --.|+++...|..+.++.++.|+.++.||++ +++
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE--------------------~G~ 147 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLE--------------------DGR 147 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEec--------------------CCE
Confidence 652211 11111 112 2368999999988888888899999999998 678
Q ss_pred EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 180 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
...++++|+..|.++.--.....+++|++||++|+||.++++.++.+.
T Consensus 148 i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 148 IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence 888889999999999885556678999999999999999999988876
No 189
>KOG0290|consensus
Probab=99.76 E-value=4.8e-17 Score=116.49 Aligned_cols=180 Identities=17% Similarity=0.178 Sum_probs=136.5
Q ss_pred CCCCEEEEeeCCCcce---eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDIPSEAQ---VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
+-|-+-.|||++++.. ...+-+|. ..|..++|...+.+.+++.+.||.||++|++..+--..+
T Consensus 170 SiDTTCTiWdie~~~~~~vkTQLIAHD--------------KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTII 235 (364)
T KOG0290|consen 170 SIDTTCTIWDIETGVSGTVKTQLIAHD--------------KEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTII 235 (364)
T ss_pred cccCeEEEEEEeeccccceeeEEEecC--------------cceeEEEeccCccceEEEecCCCcEEEEEecccccceEE
Confidence 4577889999998733 44577788 999999999855679999999999999999977644433
Q ss_pred -c---CCCCEEEEEEecCC-cEEEEeC-C-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEE
Q psy11036 82 -N---HGSPVESVLCLPSG-GIFVTGG-G-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIY 153 (239)
Q Consensus 82 -~---~~~~v~~~~~~~~~-~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~ 153 (239)
+ ...+...++|+++. +++++-. | ..|.+.|++....++..++.|.+.|..++|.|.. .+|++++.|..+.+|
T Consensus 236 YE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliW 315 (364)
T KOG0290|consen 236 YEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIW 315 (364)
T ss_pred ecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEE
Confidence 2 25678889999855 4555554 4 8899999999999999999999999999999954 689999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEE
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKI 214 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~i 214 (239)
|+...... ....++..+. ..+.|..+.|++ .+.+++.+.. +++.|
T Consensus 316 Dl~q~~~~--------------~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~-kklei 361 (364)
T KOG0290|consen 316 DLQQMPRE--------------NGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG-KKLEI 361 (364)
T ss_pred eccccccc--------------CCCCchhhhh-ccceeeeeeecccCCCEEEEEec-CeeeE
Confidence 99811100 0122333333 357799999997 5677877653 34433
No 190
>KOG1523|consensus
Probab=99.76 E-value=6e-17 Score=117.29 Aligned_cols=213 Identities=17% Similarity=0.196 Sum_probs=152.7
Q ss_pred CCEEEEeeCCCc---ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCc--eee
Q psy11036 7 ILIVALWDIPSE---AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR-SPDP--VMS 80 (239)
Q Consensus 7 dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-~~~~--~~~ 80 (239)
...|.||..... +..+++..|. ..|++++|+| ..+.|++++.|..-++|... .++. ...
T Consensus 31 ~~evhiy~~~~~~~w~~~htls~Hd--------------~~vtgvdWap-~snrIvtcs~drnayVw~~~~~~~Wkptlv 95 (361)
T KOG1523|consen 31 NHEVHIYSMLGADLWEPAHTLSEHD--------------KIVTGVDWAP-KSNRIVTCSHDRNAYVWTQPSGGTWKPTLV 95 (361)
T ss_pred CceEEEEEecCCCCceeceehhhhC--------------cceeEEeecC-CCCceeEccCCCCccccccCCCCeecccee
Confidence 357888877554 4677888888 9999999999 89999999999999999994 3332 223
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeE---EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL---LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~---~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
+ .+...++++.|+|.+..+++|+ ...|.+|-.+....- .+.-+.+...|+++.|+|++-+|++|+.|+..++|..
T Consensus 96 LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 96 LLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred EEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence 3 7899999999999999999999 577888877622221 1223457788999999999999999999999999986
Q ss_pred ccceEeeeecceeEEEEEccCC-CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe-eeEEec-CCCCe
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS-PVHTLD-YPSPV 232 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~-~~~~v 232 (239)
.-+.+.+- ..-..|+-+.. ++++.++....+.|..+.|+|+|..|+-.+.|..+.+=|..... .+.... ..-|.
T Consensus 176 yIK~Vdek---pap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ 252 (361)
T KOG1523|consen 176 YIKGVDEK---PAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPL 252 (361)
T ss_pred eeeccccC---CCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCc
Confidence 51111111 00111221111 23444454556889999999999999999999999999886654 233333 22344
Q ss_pred eeeEe
Q psy11036 233 LSIDV 237 (239)
Q Consensus 233 ~~~~~ 237 (239)
.++.|
T Consensus 253 ls~~~ 257 (361)
T KOG1523|consen 253 LSVSW 257 (361)
T ss_pred eeeEe
Confidence 44444
No 191
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=4e-16 Score=124.30 Aligned_cols=191 Identities=14% Similarity=0.070 Sum_probs=124.7
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEE-EeeCCC--eEEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVI-SGSYDK--TVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg--~v~vw~~~~~~~~~~~~~~ 84 (239)
..|++|++.+++... +.... +.+...+|+| +++.|+ +.+.+| .|.+||+.+++........
T Consensus 223 ~~i~i~dl~~G~~~~-l~~~~--------------~~~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~ 286 (429)
T PRK03629 223 SALVIQTLANGAVRQ-VASFP--------------RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 286 (429)
T ss_pred cEEEEEECCCCCeEE-ccCCC--------------CCcCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCC
Confidence 578888888776433 22222 3345689999 676665 444455 5889999888765544555
Q ss_pred CCEEEEEEecCCcEEEEeCC--CcEEEE--EccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEEccc
Q psy11036 85 SPVESVLCLPSGGIFVTGGG--LDVCIW--DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMTL 157 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~~--~~i~~~--d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~i~d~~~ 157 (239)
..+....|+|+|+.++..++ +...+| |+. .+ ....+...........|+|||++|+..+.++ .|.+||+.
T Consensus 287 ~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~-~g-~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~- 363 (429)
T PRK03629 287 SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN-GG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA- 363 (429)
T ss_pred CCcCceEECCCCCEEEEEeCCCCCceEEEEECC-CC-CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC-
Confidence 67788999999998877763 455555 554 33 3344444444566789999999988766542 35555554
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCce---EEEEEccCCeeeEEec-CCCCee
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH---AKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~---i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+. +. ..+.. ........|+|||+.|+.++.++. +.++++ +|+....+. +++.+.
T Consensus 364 ------------------~g-~~-~~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~ 421 (429)
T PRK03629 364 ------------------TG-GV-QVLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVK 421 (429)
T ss_pred ------------------CC-Ce-EEeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcC
Confidence 22 11 11221 112335689999999998887764 677777 556666665 678899
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
..+|+|
T Consensus 422 ~p~Wsp 427 (429)
T PRK03629 422 FPAWSP 427 (429)
T ss_pred CcccCC
Confidence 999998
No 192
>KOG2111|consensus
Probab=99.75 E-value=1.8e-15 Score=109.69 Aligned_cols=174 Identities=15% Similarity=0.225 Sum_probs=130.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCceeeec---
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR-SPDPVMSVN--- 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~~--- 82 (239)
...|.|||-...+++.++.-. .+|.++.+.+ ..|++.- ...|.||... +.+.+..+.
T Consensus 74 pNkviIWDD~k~~~i~el~f~---------------~~I~~V~l~r---~riVvvl-~~~I~VytF~~n~k~l~~~et~~ 134 (346)
T KOG2111|consen 74 PNKVIIWDDLKERCIIELSFN---------------SEIKAVKLRR---DRIVVVL-ENKIYVYTFPDNPKLLHVIETRS 134 (346)
T ss_pred CceEEEEecccCcEEEEEEec---------------cceeeEEEcC---CeEEEEe-cCeEEEEEcCCChhheeeeeccc
Confidence 468999996667777777665 7899999976 4555554 4689999987 555555552
Q ss_pred CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe-EEEEEeccCCceEEEEEcCCCCEEEEEecCCe-EEEEEcccc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLASGGKRLISASLDHH-AKIYEMTLK 158 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~-i~i~d~~~~ 158 (239)
.+..+.+++-..+...|+.-+ -|.|.+-|+..... ....+.+|...|.|++++.+|..+|+++..|+ |+|||..
T Consensus 135 NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~-- 212 (346)
T KOG2111|consen 135 NPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTE-- 212 (346)
T ss_pred CCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcC--
Confidence 344455444444555565555 49999999974333 35778899999999999999999999999987 5666666
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.+.++.+++. ....|.+++||||..+||++|+.|+|.||.++.
T Consensus 213 ------------------~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 213 ------------------DGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ------------------CCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 2444444442 345699999999999999999999999999865
No 193
>KOG2110|consensus
Probab=99.75 E-value=1.4e-15 Score=112.16 Aligned_cols=170 Identities=15% Similarity=0.197 Sum_probs=133.1
Q ss_pred CeEEEEEecCCCCEEEEeeCC--CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE
Q psy11036 44 YVRAGTVSPVSSDIVISGSYD--KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~d--g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~ 121 (239)
.|..+-|+. .+++..+.+ +.+++++++.+..+..+..+.+|.++.++ .+.|++.-...|.|||++ .-+++++
T Consensus 48 ~IvEmLFSS---SLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmN--r~RLvV~Lee~IyIydI~-~MklLhT 121 (391)
T KOG2110|consen 48 SIVEMLFSS---SLVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRMN--RKRLVVCLEESIYIYDIK-DMKLLHT 121 (391)
T ss_pred EEEEeeccc---ceeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEEc--cceEEEEEcccEEEEecc-cceeehh
Confidence 445555543 566555544 45999999988888888888999999997 446666666669999999 7778877
Q ss_pred Eec---cCCceEEEEEcCCCCEEEEEe--cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 122 FTC---HHKTVTSLCLASGGKRLISAS--LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 122 ~~~---~~~~i~~i~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
+.. +...+.++++++.+.+++.-+ ..|.|.+||+. +-+++..+..|.+++.+++|
T Consensus 122 I~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~--------------------nl~~v~~I~aH~~~lAalaf 181 (391)
T KOG2110|consen 122 IETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTI--------------------NLQPVNTINAHKGPLAALAF 181 (391)
T ss_pred hhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcc--------------------cceeeeEEEecCCceeEEEE
Confidence 653 444566666666777888643 34677777766 47788888999999999999
Q ss_pred ccCCCeEEEEcCCce-EEEEEccCCeeeEEec---CCCCeeeeEecC
Q psy11036 197 ASGGKRLISASLDHH-AKIYEMVNFSPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 197 s~~~~~l~s~s~d~~-i~iwd~~~~~~~~~~~---~~~~v~~~~~sp 239 (239)
+++|.+|||+|+.|+ ||||.+.+|+.+.++. ....|.+++|+|
T Consensus 182 s~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ 228 (391)
T KOG2110|consen 182 SPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSP 228 (391)
T ss_pred CCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECC
Confidence 999999999999997 7999999999999998 455899999987
No 194
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.74 E-value=5.3e-15 Score=114.50 Aligned_cols=220 Identities=8% Similarity=0.114 Sum_probs=142.6
Q ss_pred CCCCCCEEEEeeCCC-cc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe-eCCCeEEEEeCCC-CCc
Q psy11036 3 HDLPILIVALWDIPS-EA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG-SYDKTVNVYDTRS-PDP 77 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~v~vw~~~~-~~~ 77 (239)
.++.++.|++||+.+ ++ .++.+... +....++++| ++++|+++ ..++.|.+|++.. ++.
T Consensus 7 ~~~~~~~I~~~~~~~~g~l~~~~~~~~~---------------~~~~~l~~sp-d~~~lyv~~~~~~~i~~~~~~~~g~l 70 (330)
T PRK11028 7 ASPESQQIHVWNLNHEGALTLLQVVDVP---------------GQVQPMVISP-DKRHLYVGVRPEFRVLSYRIADDGAL 70 (330)
T ss_pred EcCCCCCEEEEEECCCCceeeeeEEecC---------------CCCccEEECC-CCCEEEEEECCCCcEEEEEECCCCce
Confidence 456789999999964 33 34445432 5567899999 77776555 4578899999863 332
Q ss_pred --eeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe---EEEEEeccCCceEEEEEcCCCCEEEEEe-cCCe
Q psy11036 78 --VMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK---LLHKFTCHHKTVTSLCLASGGKRLISAS-LDHH 149 (239)
Q Consensus 78 --~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~ 149 (239)
............++++|+++++++++ ++.|.+|++...+. .+..+. +......++++|+++++++++ .++.
T Consensus 71 ~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~ 149 (330)
T PRK11028 71 TFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDR 149 (330)
T ss_pred EEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCE
Confidence 22223445677899999999999887 68999999963332 223332 334467788999998886544 5699
Q ss_pred EEEEEcc-cceEe-------e-----------e-----------ecceeEEEEEccCC---CEEEEEEecc------cCc
Q psy11036 150 AKIYEMT-LKTVS-------S-----------F-----------TGGLDVCIWDMLGG---GKLLHKFTCH------HKT 190 (239)
Q Consensus 150 i~i~d~~-~~~~~-------~-----------~-----------~~~~~i~~~d~~~~---~~~~~~~~~h------~~~ 190 (239)
|.+||++ ...+. . + .+...+.+|++... .+.+..+..+ ...
T Consensus 150 v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 229 (330)
T PRK11028 150 IRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRW 229 (330)
T ss_pred EEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCcc
Confidence 9999997 22110 0 0 12455888988632 2333333221 112
Q ss_pred EEEEEEccCCCeEEEEc-CCceEEEEEccCCe----eeEEecCCCCeeeeEecC
Q psy11036 191 VTSLCLASGGKRLISAS-LDHHAKIYEMVNFS----PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp 239 (239)
...+.++|++++|+++. .++.|.+|++.... .+..+........++|+|
T Consensus 230 ~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~ 283 (330)
T PRK11028 230 AADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDH 283 (330)
T ss_pred ceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECC
Confidence 34688999999998885 47899999985432 333333333455666665
No 195
>KOG1272|consensus
Probab=99.74 E-value=7.3e-18 Score=127.47 Aligned_cols=192 Identities=20% Similarity=0.295 Sum_probs=150.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~ 85 (239)
-..++|||- .|..+..++.+ ..|..+.|.| ..-+|++++..|.++--|+.+|+.+..+ ...+
T Consensus 190 K~y~yvYD~-~GtElHClk~~---------------~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G 252 (545)
T KOG1272|consen 190 KKYVYVYDN-NGTELHCLKRH---------------IRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLVASIRTGAG 252 (545)
T ss_pred hceEEEecC-CCcEEeehhhc---------------Cchhhhcccc-hhheeeecccCCceEEEeechhhhhHHHHccCC
Confidence 467889984 67888889888 6799999999 7888999999999999999999999888 4567
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeee
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT 164 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 164 (239)
.+..++-+|-+..+-.|. .|+|.+|... ..+++..+..|.++|.++++.++|++++|.+.|..++|||++
T Consensus 253 ~~~vm~qNP~NaVih~GhsnGtVSlWSP~-skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR-------- 323 (545)
T KOG1272|consen 253 RTDVMKQNPYNAVIHLGHSNGTVSLWSPN-SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLR-------- 323 (545)
T ss_pred ccchhhcCCccceEEEcCCCceEEecCCC-CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeec--------
Confidence 888899999888888888 6999999998 788888888899999999999999999999999999999998
Q ss_pred cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc-cCCe-----eeEEecCCCCeeeeEec
Q psy11036 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-VNFS-----PVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 165 ~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~-~~~~-----~~~~~~~~~~v~~~~~s 238 (239)
....+.++.. ..+...+++|..|- || .|....|.||.- -.+. +...-...++|.++.|+
T Consensus 324 ------------~~~ql~t~~t-p~~a~~ls~Sqkgl-LA-~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~Fc 388 (545)
T KOG1272|consen 324 ------------NFYQLHTYRT-PHPASNLSLSQKGL-LA-LSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFC 388 (545)
T ss_pred ------------cccccceeec-CCCccccccccccc-ee-eecCCeeeeehhhhcCCCCCCcchhhhccCcccccceec
Confidence 1122222222 34566788885543 33 444557999943 2211 22222356789999888
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 389 P 389 (545)
T KOG1272|consen 389 P 389 (545)
T ss_pred c
Confidence 7
No 196
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=1.2e-15 Score=121.60 Aligned_cols=197 Identities=16% Similarity=0.122 Sum_probs=127.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---KTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~~~~~~~~~~~ 83 (239)
...|.++|.+ +...+.+..+. ..+.+.+|+| +++.|+..+.+ ..|.+||+.+++.......
T Consensus 175 ~~~L~~~D~d-G~~~~~l~~~~--------------~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~ 238 (427)
T PRK02889 175 RYQLQISDAD-GQNAQSALSSP--------------EPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRVVANF 238 (427)
T ss_pred ccEEEEECCC-CCCceEeccCC--------------CCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEEeecC
Confidence 4578888874 44444455555 7889999999 77777765532 4699999998876544345
Q ss_pred CCCEEEEEEecCCcEEEEe-C-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CCeEEEEEcccceE
Q psy11036 84 GSPVESVLCLPSGGIFVTG-G-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIYEMTLKTV 160 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~~~~~ 160 (239)
.+.....+|+|+|+.++.. + ++...+|.++..+.....+..+........|+|||+.|+..+. ++...+|.++
T Consensus 239 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~---- 314 (427)
T PRK02889 239 KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMP---- 314 (427)
T ss_pred CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEE----
Confidence 5667789999999988754 4 5766666554333345556555556677899999998886654 4555666543
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc---eEEEEEccCCeeeEEecCCCCeeeeEe
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMVNFSPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~~v~~~~~ 237 (239)
..+.......+. ........|+|||++|+..+.++ .|.+||+.+++... +.......+.+|
T Consensus 315 -------------~~~g~~~~lt~~--g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~~~~~~p~~ 378 (427)
T PRK02889 315 -------------ASGGAAQRVTFT--GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDTTRDESPSF 378 (427)
T ss_pred -------------CCCCceEEEecC--CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCCCCccCceE
Confidence 111111111112 22234578999999998776544 69999998876543 332333456677
Q ss_pred cC
Q psy11036 238 SM 239 (239)
Q Consensus 238 sp 239 (239)
+|
T Consensus 379 sp 380 (427)
T PRK02889 379 AP 380 (427)
T ss_pred CC
Confidence 65
No 197
>KOG0303|consensus
Probab=99.74 E-value=9e-16 Score=114.17 Aligned_cols=139 Identities=17% Similarity=0.282 Sum_probs=118.8
Q ss_pred CCCCCCEEEEeeCCCc-------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC
Q psy11036 3 HDLPILIVALWDIPSE-------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP 75 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~ 75 (239)
+.+.|.+|.||++..+ +++..+.+|. ..|--++|+|...+.|++++.|.+|.+||+.++
T Consensus 99 SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--------------rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tg 164 (472)
T KOG0303|consen 99 SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--------------RRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTG 164 (472)
T ss_pred cCCCCceEEEEECCCcccccCcccceEEEeecc--------------eeEEEEeecccchhhHhhccCCceEEEEeccCC
Confidence 4577899999998764 3466778888 899999999988899999999999999999999
Q ss_pred CceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC-ceEEEEEcCCCCEEEEEe---cCCeE
Q psy11036 76 DPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASGGKRLISAS---LDHHA 150 (239)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~---~d~~i 150 (239)
+...++.|...|.++.|+.+|.++++++ |..|++||.+ .++.+..-.+|.+ .-....|-.+|..+.+|- .+.++
T Consensus 165 eali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr-~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~ 243 (472)
T KOG0303|consen 165 EALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR-RGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQI 243 (472)
T ss_pred ceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCC-CCcEeeecccccCCCcceeEEeccCceeeeccccccccce
Confidence 9999999999999999999999999999 8999999999 8888888778876 344566777888555543 46789
Q ss_pred EEEEcc
Q psy11036 151 KIYEMT 156 (239)
Q Consensus 151 ~i~d~~ 156 (239)
-+||..
T Consensus 244 aLwdp~ 249 (472)
T KOG0303|consen 244 ALWDPN 249 (472)
T ss_pred eccCcc
Confidence 999987
No 198
>KOG1523|consensus
Probab=99.74 E-value=2.5e-16 Score=114.12 Aligned_cols=180 Identities=15% Similarity=0.116 Sum_probs=140.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC---ceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC-
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD---PVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG- 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~- 116 (239)
++|+|.+|++ +...++.+-.+..|.||.....+ ...++ .|...|+.+.|+|....|++++ |..-++|.....+
T Consensus 11 ~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 11 EPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred CceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 8999999999 88999999999999999987766 34455 6999999999999999999998 8999999985333
Q ss_pred -eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 117 -KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 117 -~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
++.-.+..++...+++.|+|.++.|++|+....|.||-++.+.-- --..+.-+.+.+.|.++.
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdW----------------WVsKhikkPirStv~sld 153 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDW----------------WVSKHIKKPIRSTVTSLD 153 (361)
T ss_pred eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccce----------------ehhhhhCCccccceeeee
Confidence 344455668899999999999999999999999998877611100 001112245678899999
Q ss_pred EccCCCeEEEEcCCceEEEEEcc------------------CCeeeEEe-cCCCCeeeeEecC
Q psy11036 196 LASGGKRLISASLDHHAKIYEMV------------------NFSPVHTL-DYPSPVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~~------------------~~~~~~~~-~~~~~v~~~~~sp 239 (239)
|+|++-+|+.||.|+..|+|... -|+++.++ ...+.+..+.|+|
T Consensus 154 WhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~ 216 (361)
T KOG1523|consen 154 WHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP 216 (361)
T ss_pred ccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC
Confidence 99999999999999999999642 12334444 3556788888875
No 199
>KOG0322|consensus
Probab=99.73 E-value=1.2e-16 Score=112.94 Aligned_cols=155 Identities=17% Similarity=0.291 Sum_probs=120.6
Q ss_pred CCeEEEEEecCCCC--EEEEeeCCCeEEEEeCCCCCceeee-----------cCCCCEEEEEEecCCcEEEEeC-CCcEE
Q psy11036 43 DYVRAGTVSPVSSD--IVISGSYDKTVNVYDTRSPDPVMSV-----------NHGSPVESVLCLPSGGIFVTGG-GLDVC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~--~l~s~~~dg~v~vw~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~-~~~i~ 108 (239)
+.+.|..+....+. ++++|.++|.+.+||+.++..+..+ .|..+|.++.+.+.-..=++++ +..+.
T Consensus 151 gsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~ 230 (323)
T KOG0322|consen 151 GSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLV 230 (323)
T ss_pred CceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccce
Confidence 66777775543333 5677889999999999987433322 3889999999987554445555 67788
Q ss_pred EEEccCCCe---EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 109 IWDMLGGGK---LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 109 ~~d~~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
.|.+..... ...+..-.+-.|..+..-||++.+|+++.|+.|++|..+ +.+++..++
T Consensus 231 ~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswr--------------------tl~pLAVLk 290 (323)
T KOG0322|consen 231 MYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWR--------------------TLNPLAVLK 290 (323)
T ss_pred eeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEec--------------------cCCchhhhh
Confidence 888863311 112222234568889999999999999999999999988 677888889
Q ss_pred cccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 186 CHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
-|...|.+++|+|+..++|.+|.|++|.+|++
T Consensus 291 yHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 291 YHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 99999999999999999999999999999986
No 200
>KOG0322|consensus
Probab=99.73 E-value=2.7e-16 Score=111.19 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=143.3
Q ss_pred CCCEEEEeeCCCcceeeeee-CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce------
Q psy11036 6 PILIVALWDIPSEAQVSTFT-NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV------ 78 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~------ 78 (239)
.-|.|.+|++.+.+....++ .+. ..|+.+.--| + ..+.+-+.|+.+.+|++.-...+
T Consensus 33 ~~G~V~~w~lqt~r~~~~~r~~g~--------------~~it~lq~~p-~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~ 96 (323)
T KOG0322|consen 33 SVGIVKMWVLQTERDLPLIRLFGR--------------LFITNLQSIP-N-DSLDTQGRDPLLILWTIAYSAFISIHSIV 96 (323)
T ss_pred ccceEEEEEeecCccchhhhhhcc--------------ceeeceeecC-C-cchhhcCCCceEEEEEccCcceEEEeeee
Confidence 34899999999999888888 455 7899999988 4 67888899999999987642100
Q ss_pred --------eee-------------c---------------------------CCCCEEEEEEec-C-CcEEEEeC--CCc
Q psy11036 79 --------MSV-------------N---------------------------HGSPVESVLCLP-S-GGIFVTGG--GLD 106 (239)
Q Consensus 79 --------~~~-------------~---------------------------~~~~v~~~~~~~-~-~~~l~~~~--~~~ 106 (239)
..+ . ..+.+.+..+.. + ...++.++ +|.
T Consensus 97 ~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsgh 176 (323)
T KOG0322|consen 97 VNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGH 176 (323)
T ss_pred ccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCe
Confidence 000 0 112233333221 2 23444444 699
Q ss_pred EEEEEccCCCe----------EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEcc
Q psy11036 107 VCIWDMLGGGK----------LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDML 175 (239)
Q Consensus 107 i~~~d~~~~~~----------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~ 175 (239)
+.+||+. .+. .......|.++|.++.+.+....=++|+.+..+..|+++ ....
T Consensus 177 vv~wd~S-~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gs--------------- 240 (323)
T KOG0322|consen 177 VVIWDLS-TGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGS--------------- 240 (323)
T ss_pred EEEEEcc-CCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCc---------------
Confidence 9999998 432 223334689999999998876777888888889899887 1000
Q ss_pred CCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+.-.+..-..-.|..+..-||++.+||++.|++||||.-+++.++..+. |.+.|++++|+|
T Consensus 241 --lq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfsp 303 (323)
T KOG0322|consen 241 --LQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSP 303 (323)
T ss_pred --ccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCC
Confidence 01111112223457888999999999999999999999999999999998 889999999997
No 201
>KOG1517|consensus
Probab=99.72 E-value=1.1e-15 Score=126.15 Aligned_cols=208 Identities=14% Similarity=0.223 Sum_probs=141.9
Q ss_pred CCCCCEEEEeeC-CCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 4 DLPILIVALWDI-PSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 4 ~~~dg~i~vwd~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
.+.||.|+||+- .++ +.+..+.+-. ...+...+.=.-+.|..+.|.++++ +.-..|+|||....+..
T Consensus 1129 as~dGvIRIwk~y~~~~~~~eLVTaw~~Ls-------~~~~~~r~~~~v~dWqQ~~G~Ll~t-Gd~r~IRIWDa~~E~~~ 1200 (1387)
T KOG1517|consen 1129 ASSDGVIRIWKDYADKWKKPELVTAWSSLS-------DQLPGARGTGLVVDWQQQSGHLLVT-GDVRSIRIWDAHKEQVV 1200 (1387)
T ss_pred eccCceEEEecccccccCCceeEEeecccc-------ccCccCCCCCeeeehhhhCCeEEec-CCeeEEEEEecccceeE
Confidence 467899999963 332 3333222211 0011111222557888855555554 55789999999988877
Q ss_pred eeec--CCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCc--eEEEEEcCCCC-EEEEEecCCe
Q psy11036 79 MSVN--HGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKT--VTSLCLASGGK-RLISASLDHH 149 (239)
Q Consensus 79 ~~~~--~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~--i~~i~~~~~~~-~l~~~~~d~~ 149 (239)
..+. ....++++.-+. .|..+++|- ||.|++||.+.... .+...+.|+.. |..+.+.++|- .|++|+.||.
T Consensus 1201 ~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~ 1280 (1387)
T KOG1517|consen 1201 ADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGD 1280 (1387)
T ss_pred eecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCe
Confidence 7763 455677776544 467788777 89999999985443 66777888887 99999998774 5999999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecc---cCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH---HKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h---~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
|++||+++....++ .....| .+..+++..+++...+|+|+. +.|+||++. |+.+..+
T Consensus 1281 I~~~DlR~~~~e~~------------------~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~ 1340 (1387)
T KOG1517|consen 1281 IQLLDLRMSSKETF------------------LTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNII 1340 (1387)
T ss_pred EEEEecccCccccc------------------ceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhccc
Confidence 99999993221111 111122 235899999999999999998 999999984 4554444
Q ss_pred c--------CCCCeeeeEecC
Q psy11036 227 D--------YPSPVLSIDVSM 239 (239)
Q Consensus 227 ~--------~~~~v~~~~~sp 239 (239)
. ..+.+.+++|||
T Consensus 1341 k~n~~F~~q~~gs~scL~FHP 1361 (1387)
T KOG1517|consen 1341 KYNPGFMGQRIGSVSCLAFHP 1361 (1387)
T ss_pred ccCcccccCcCCCcceeeecc
Confidence 3 234789999997
No 202
>KOG1310|consensus
Probab=99.72 E-value=2.1e-17 Score=127.60 Aligned_cols=171 Identities=20% Similarity=0.278 Sum_probs=131.7
Q ss_pred eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEec--C
Q psy11036 20 QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLP--S 95 (239)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~--~ 95 (239)
+.+++.+|+ +.|.|++|+. +|.+|++|+.|-.+.|||.-..+.+..+ +|...|.++.|-| +
T Consensus 42 lE~eL~GH~--------------GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tn 106 (758)
T KOG1310|consen 42 LEAELTGHT--------------GCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTN 106 (758)
T ss_pred hhhhhcccc--------------ceecceeecC-CCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCC
Confidence 345678888 9999999999 8999999999999999999888888777 7999999999999 4
Q ss_pred CcEEEEeC-CCcEEEEEccC---------CCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEccc--ceEee
Q psy11036 96 GGIFVTGG-GLDVCIWDMLG---------GGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTL--KTVSS 162 (239)
Q Consensus 96 ~~~l~~~~-~~~i~~~d~~~---------~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~--~~~~~ 162 (239)
.+.+++|. |..|+++|+.. .......+..|...|..|+-.|++ ..+.++++||+++-+|++. .+...
T Consensus 107 nriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~ 186 (758)
T KOG1310|consen 107 NRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPD 186 (758)
T ss_pred CeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcc
Confidence 55666666 89999999973 123445566789999999999988 7899999999999999981 11111
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEc
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEM 217 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~ 217 (239)
.. -...+..+...--...++..+|. ..+|+.|+.|-..++||.
T Consensus 187 ~~------------~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~ 230 (758)
T KOG1310|consen 187 ED------------CPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDR 230 (758)
T ss_pred cc------------ccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhh
Confidence 10 00011111122234678899994 568899999999999994
No 203
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=6.7e-15 Score=117.83 Aligned_cols=193 Identities=16% Similarity=0.108 Sum_probs=129.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CCeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~~~ 83 (239)
...|+++|.+. ...+.+..+. ..+.+.+|+| +++.|+..+. +..|.+||+.+++.......
T Consensus 181 ~~~l~~~d~dg-~~~~~lt~~~--------------~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~ 244 (435)
T PRK05137 181 IKRLAIMDQDG-ANVRYLTDGS--------------SLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRELVGNF 244 (435)
T ss_pred ceEEEEECCCC-CCcEEEecCC--------------CCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEEEeecC
Confidence 45889999854 4445566666 7899999999 6777776553 46899999988876443356
Q ss_pred CCCEEEEEEecCCcEEEEeC--CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CC--eEEEEEcc
Q psy11036 84 GSPVESVLCLPSGGIFVTGG--GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~--~i~i~d~~ 156 (239)
.+.+...+|+|+|+.++... ++ .|.+||+. .+ ....+..+........|+|||+.|+..+. ++ .|+++|+.
T Consensus 245 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~-~~-~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~ 322 (435)
T PRK05137 245 PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLR-SG-TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD 322 (435)
T ss_pred CCcccCcEECCCCCEEEEEEecCCCceEEEEECC-CC-ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence 67778899999999876443 44 47777886 44 34556656666778999999998887764 33 34455544
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---ceEEEEEccCCeeeEEecCCCCee
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMVNFSPVHTLDYPSPVL 233 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~~v~ 233 (239)
. ++. ..+..+...+....|+|||+.|+..+.+ ..|.+||+.++. ...+.....+.
T Consensus 323 -------------------g-~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~ 380 (435)
T PRK05137 323 -------------------G-SNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSGFLVE 380 (435)
T ss_pred -------------------C-CCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCCCCCC
Confidence 2 211 2222234456678899999999876543 368888885543 33344333566
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+.+|+|
T Consensus 381 ~p~~sp 386 (435)
T PRK05137 381 GPTWAP 386 (435)
T ss_pred CCeECC
Confidence 677776
No 204
>KOG1517|consensus
Probab=99.72 E-value=4e-16 Score=128.71 Aligned_cols=188 Identities=20% Similarity=0.244 Sum_probs=141.1
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeee
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---VMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---~~~~ 81 (239)
|.-..|+|||++..+.+..+..... ..|+++.-+...++.+++|..||.|++||.+...+ +...
T Consensus 1184 Gd~r~IRIWDa~~E~~~~diP~~s~-------------t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~ 1250 (1387)
T KOG1517|consen 1184 GDVRSIRIWDAHKEQVVADIPYGSS-------------TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVY 1250 (1387)
T ss_pred CCeeEEEEEecccceeEeecccCCC-------------ccceeecccccCCceEEEeecCCceEEeecccCCccccceee
Confidence 4457899999988888877765542 67888877765789999999999999999886543 2233
Q ss_pred -cCCCC--EEEEEEecCCcE-EEEeC-CCcEEEEEccCC-CeEEEEEeccC--C-ceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 82 -NHGSP--VESVLCLPSGGI-FVTGG-GLDVCIWDMLGG-GKLLHKFTCHH--K-TVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 82 -~~~~~--v~~~~~~~~~~~-l~~~~-~~~i~~~d~~~~-~~~~~~~~~~~--~-~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
.|... |..+.+.++|-- +++|+ +|.|++||++.. .+....+..|. + ..+++..+++...+|+|+. +.|+|
T Consensus 1251 R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikI 1329 (1387)
T KOG1517|consen 1251 REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKI 1329 (1387)
T ss_pred cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEE
Confidence 46555 999999886654 77777 899999999952 33333333333 3 5899999999999999988 99999
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
|++.++.+..+. ... ..+....+.+.+++|+|..-.+|.|+.|..|.||.....
T Consensus 1330 y~~~G~~l~~~k-----------~n~---~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1330 YSLSGEQLNIIK-----------YNP---GFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred EecChhhhcccc-----------cCc---ccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence 999966655551 011 111223456799999999999999999999999987654
No 205
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=4.2e-15 Score=119.03 Aligned_cols=192 Identities=14% Similarity=0.085 Sum_probs=126.9
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCe--EEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKT--VNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~--v~vw~~~~~~~~~~~~~ 83 (239)
+..|++||+.+++.. .+..+. +.+...+|+| +++.| ++.+.++. |.+||+.+++......+
T Consensus 225 ~~~i~~~dl~~g~~~-~l~~~~--------------g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~ 288 (435)
T PRK05137 225 RPRVYLLDLETGQRE-LVGNFP--------------GMTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDS 288 (435)
T ss_pred CCEEEEEECCCCcEE-EeecCC--------------CcccCcEECC-CCCEEEEEEecCCCceEEEEECCCCceEEccCC
Confidence 468999999887653 344444 6677899999 56654 56666655 77778887765443355
Q ss_pred CCCEEEEEEecCCcEEEEeCC--C--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEEcc
Q psy11036 84 GSPVESVLCLPSGGIFVTGGG--L--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~--~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~i~d~~ 156 (239)
........|+|+|+.++..++ + .|.++|+. .+ ....+..+...+....|+|+|+.|+....++ .|.+||+.
T Consensus 289 ~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~-g~-~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~ 366 (435)
T PRK05137 289 PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD-GS-NPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD 366 (435)
T ss_pred CCccCceeEcCCCCEEEEEECCCCCCeEEEEECC-CC-CeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC
Confidence 556677899999998887763 3 57777875 33 3344444455667789999999998876532 34455543
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC------ceEEEEEccCCeeeEEecCCC
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD------HHAKIYEMVNFSPVHTLDYPS 230 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~ 230 (239)
.... ..+. ....+....|+|||+.|+..+.+ ..+.++|+..++. ..+..++
T Consensus 367 -------------------~~~~--~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~~~ 423 (435)
T PRK05137 367 -------------------GSGE--RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPTPG 423 (435)
T ss_pred -------------------CCce--Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccCCC
Confidence 2111 1111 12235678999999988765432 3688888866554 4555566
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
.+...+|+|
T Consensus 424 ~~~~p~Wsp 432 (435)
T PRK05137 424 DASDPAWSP 432 (435)
T ss_pred CccCcccCC
Confidence 688888887
No 206
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.71 E-value=3.3e-15 Score=106.11 Aligned_cols=113 Identities=23% Similarity=0.388 Sum_probs=89.0
Q ss_pred CCeEEEEEecCCCCEEE--EeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVI--SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~--s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~~ 116 (239)
++|.+++|+| +++.++ .|..++.+.+||++ ++.+..++ ...+..+.|+|+|+++++++ .|.+.+||.+ ..
T Consensus 60 ~~I~~~~WsP-~g~~favi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~-~~ 135 (194)
T PF08662_consen 60 GPIHDVAWSP-NGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR-KK 135 (194)
T ss_pred CceEEEEECc-CCCEEEEEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC-CC
Confidence 5799999999 566543 34567899999996 66666664 46778999999999999987 3779999998 77
Q ss_pred eEEEEEeccCCceEEEEEcCCCCEEEEEec------CCeEEEEEcccceEe
Q psy11036 117 KLLHKFTCHHKTVTSLCLASGGKRLISASL------DHHAKIYEMTLKTVS 161 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~ 161 (239)
+.+.... |. .++.++|+|+|++|+++.. |+.++||+..++.+.
T Consensus 136 ~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~~l~ 184 (194)
T PF08662_consen 136 KKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGRLLY 184 (194)
T ss_pred EEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCeEeE
Confidence 7777665 33 4789999999999999875 677888888744443
No 207
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=8.6e-15 Score=117.11 Aligned_cols=191 Identities=15% Similarity=0.090 Sum_probs=123.0
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCC--eEEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDK--TVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg--~v~vw~~~~~~~~~~~~~~ 84 (239)
..|++||+.+++... +.... +...+.+|+| +++.| ++.+.+| .|.+||+.+++......+.
T Consensus 228 ~~l~~~dl~~g~~~~-l~~~~--------------g~~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~ 291 (433)
T PRK04922 228 SAIYVQDLATGQREL-VASFR--------------GINGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHF 291 (433)
T ss_pred cEEEEEECCCCCEEE-eccCC--------------CCccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCeEECccCC
Confidence 578999998776532 33333 4455789999 56654 5555555 5999999887754433454
Q ss_pred CCEEEEEEecCCcEEEEeC--CCc--EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEEccc
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMTL 157 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~--i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~i~d~~~ 157 (239)
......+|+|+|+.++..+ ++. |.++++. .++ ...+..+.......+|+|+|++++..+.++ .|.+||+.
T Consensus 292 ~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~-~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~- 368 (433)
T PRK04922 292 GIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS-GGS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS- 368 (433)
T ss_pred CCccceEECCCCCEEEEEECCCCCceEEEEECC-CCC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC-
Confidence 5556789999999888776 344 5556665 333 333333334455789999999988765443 46666665
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---ceEEEEEccCCeeeEEec-CCCCee
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+ ++.. .+. +........|+|||++++..+.+ +.|.++++. +.....+. ..+.+.
T Consensus 369 ------------------~-g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~ 426 (433)
T PRK04922 369 ------------------T-GSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVR 426 (433)
T ss_pred ------------------C-CCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCC
Confidence 2 2211 111 12234456899999988766543 468888884 44555555 457788
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
..+|+|
T Consensus 427 ~p~wsp 432 (433)
T PRK04922 427 EPAWSP 432 (433)
T ss_pred CCccCC
Confidence 899987
No 208
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.69 E-value=1.5e-14 Score=111.99 Aligned_cols=197 Identities=10% Similarity=0.191 Sum_probs=124.9
Q ss_pred CCEEEEeeCCC-cc---eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCcee--
Q psy11036 7 ILIVALWDIPS-EA---QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVM-- 79 (239)
Q Consensus 7 dg~i~vwd~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~-- 79 (239)
++.|.+|++++ +. .+..+.+. ....+++++| +++++ ++...++.|.+||+.+...+.
T Consensus 101 ~~~v~v~~~~~~g~~~~~~~~~~~~---------------~~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~l~~~ 164 (330)
T PRK11028 101 ANCVSVSPLDKDGIPVAPIQIIEGL---------------EGCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGHLVAQ 164 (330)
T ss_pred CCeEEEEEECCCCCCCCceeeccCC---------------CcccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCccccc
Confidence 68899998864 22 22222222 3466789999 66666 555567999999997633221
Q ss_pred -----eecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC-C--eEEEEEeccC------CceEEEEEcCCCCEEEE
Q psy11036 80 -----SVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG-G--KLLHKFTCHH------KTVTSLCLASGGKRLIS 143 (239)
Q Consensus 80 -----~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~-~--~~~~~~~~~~------~~i~~i~~~~~~~~l~~ 143 (239)
..........++|+|++++++++. ++.|.+|+++.. + +.+..+..+. .....+.++|+++++++
T Consensus 165 ~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv 244 (330)
T PRK11028 165 EPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYA 244 (330)
T ss_pred CCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEE
Confidence 122344567899999999998887 699999999732 2 2333333211 12336889999999888
Q ss_pred Eec-CCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-CceEEEEEcc--
Q psy11036 144 ASL-DHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIYEMV-- 218 (239)
Q Consensus 144 ~~~-d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~~i~iwd~~-- 218 (239)
+.. ++.|.+|+++ .... .+.+..... ......+.++|+|++|+++.. +++|.+|++.
T Consensus 245 ~~~~~~~I~v~~i~~~~~~-----------------~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 245 CDRTASLISVFSVSEDGSV-----------------LSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred ecCCCCeEEEEEEeCCCCe-----------------EEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcCC
Confidence 854 6889999886 1100 011111111 123457899999999987765 8999999874
Q ss_pred CCe--eeEEecCCCCeeeeEe
Q psy11036 219 NFS--PVHTLDYPSPVLSIDV 237 (239)
Q Consensus 219 ~~~--~~~~~~~~~~v~~~~~ 237 (239)
++. .+.++.......+++|
T Consensus 307 ~g~l~~~~~~~~g~~P~~~~~ 327 (330)
T PRK11028 307 TGLLTELGRYAVGQGPMWVSV 327 (330)
T ss_pred CCcEEEccccccCCCceEEEE
Confidence 343 3445544445555554
No 209
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=1.3e-14 Score=115.78 Aligned_cols=192 Identities=16% Similarity=0.117 Sum_probs=121.5
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEE-EeeCCCeEEEEe--CCCCCceeee-cC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVI-SGSYDKTVNVYD--TRSPDPVMSV-NH 83 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~dg~v~vw~--~~~~~~~~~~-~~ 83 (239)
..|++||+.+++... +.... +.+...+|+| +++.|+ +.+.+|...+|. +.++. ...+ .+
T Consensus 220 ~~I~~~dl~~g~~~~-l~~~~--------------g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~ 282 (427)
T PRK02889 220 PVVYVHDLATGRRRV-VANFK--------------GSNSAPAWSP-DGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQS 282 (427)
T ss_pred cEEEEEECCCCCEEE-eecCC--------------CCccceEECC-CCCEEEEEEccCCCceEEEEECCCCC-cEECCCC
Confidence 469999998886543 33233 5566899999 666554 667788766665 44444 3334 44
Q ss_pred CCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEEcccc
Q psy11036 84 GSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMTLK 158 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~i~d~~~~ 158 (239)
........|+|+|+.++..+ ++...+|.+...+.....+..........+|+|+|++|+..+.++ .|.+||+.
T Consensus 283 ~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~-- 360 (427)
T PRK02889 283 SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLA-- 360 (427)
T ss_pred CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECC--
Confidence 44566788999999888666 366677765422322333332333345688999999998777654 46666665
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc---eEEEEEccCCeeeEEec-CCCCeee
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMVNFSPVHTLD-YPSPVLS 234 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~-~~~~v~~ 234 (239)
+ ++.. .+.. ........|+|||+.|+.++.++ .+.+.++ +++....+. ..+.+..
T Consensus 361 -----------------~-g~~~-~lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~ 419 (427)
T PRK02889 361 -----------------T-GQVT-ALTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVRE 419 (427)
T ss_pred -----------------C-CCeE-EccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCC
Confidence 2 1111 1111 12235679999999988776543 3555566 566666665 5577888
Q ss_pred eEecC
Q psy11036 235 IDVSM 239 (239)
Q Consensus 235 ~~~sp 239 (239)
.+|+|
T Consensus 420 p~wsp 424 (427)
T PRK02889 420 PSWGP 424 (427)
T ss_pred CccCC
Confidence 99987
No 210
>KOG1524|consensus
Probab=99.69 E-value=5.7e-16 Score=119.51 Aligned_cols=161 Identities=17% Similarity=0.235 Sum_probs=125.5
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSL 132 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i 132 (239)
.+.++.++.||.+.+.+- .++....+ .|.+.+.+-.|+|+|.-|++++ ||.|++|.- ++....++.....+|.|+
T Consensus 75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr--sGMLRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR--SGMLRSTVVQNEESIRCA 151 (737)
T ss_pred cceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec--cchHHHHHhhcCceeEEE
Confidence 457888899999998873 45555555 6999999999999999999988 899999986 455555555567799999
Q ss_pred EEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 133 CLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 133 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
+|.|+...++-+- .+.+.|=.+. ....+...+.|.+-|.++.|++..+++++|++|-..
T Consensus 152 ~W~p~S~~vl~c~-g~h~~IKpL~--------------------~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kf 210 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQ-GGHISIKPLA--------------------ANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRF 210 (737)
T ss_pred EECCCCCceEEec-CCeEEEeecc--------------------cccceeEEeccCcEEEEeecCccccceeecCCceeE
Confidence 9999987766653 3445444433 233445568899999999999999999999999999
Q ss_pred EEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
+|||-.......+-.++-+|++++|+|
T Consensus 211 KvWD~~G~~Lf~S~~~ey~ITSva~np 237 (737)
T KOG1524|consen 211 KIWDAQGANLFTSAAEEYAITSVAFNP 237 (737)
T ss_pred EeecccCcccccCChhccceeeeeecc
Confidence 999975444444445888999999987
No 211
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=1.5e-14 Score=115.76 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=126.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CCeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~~~ 83 (239)
...|++||.+... .+.+..+. ..+.+.+|+| +++.|+..+. +..|.+||+.+++.......
T Consensus 183 ~~~l~i~D~~g~~-~~~lt~~~--------------~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~ 246 (433)
T PRK04922 183 RYALQVADSDGYN-PQTILRSA--------------EPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRELVASF 246 (433)
T ss_pred eEEEEEECCCCCC-ceEeecCC--------------CccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEEEeccC
Confidence 3578999985443 44555555 7899999999 7877776653 34799999988775443344
Q ss_pred CCCEEEEEEecCCcEEEEe-C-CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CCe--EEEEEcc
Q psy11036 84 GSPVESVLCLPSGGIFVTG-G-GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHH--AKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~-~-~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~--i~i~d~~ 156 (239)
.+...+.+|+|+|+.++.. + ++ .|.+||+. .++ ...+..+.......+|+|||+.|+..+. ++. |.++|+.
T Consensus 247 ~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~-~g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~ 324 (433)
T PRK04922 247 RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLG-SRQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS 324 (433)
T ss_pred CCCccCceECCCCCEEEEEEeCCCCceEEEEECC-CCC-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 5556688999999987654 3 33 59999997 444 3445555555677899999998887764 444 3333333
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc---eEEEEEccCCeeeEEecCCCCee
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMVNFSPVHTLDYPSPVL 233 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~~v~ 233 (239)
+ ++. ..+..+.......+|+|||++|+..+.++ .|.+||+.+++.. .+.......
T Consensus 325 -------------------~-g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~ 382 (433)
T PRK04922 325 -------------------G-GSA-ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDE 382 (433)
T ss_pred -------------------C-CCe-EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCC
Confidence 2 111 11111223344689999999988765432 6999999887654 444333445
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+.+|+|
T Consensus 383 ~p~~sp 388 (433)
T PRK04922 383 SPSFAP 388 (433)
T ss_pred CceECC
Confidence 566765
No 212
>KOG2139|consensus
Probab=99.68 E-value=3.2e-15 Score=110.26 Aligned_cols=174 Identities=17% Similarity=0.148 Sum_probs=128.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEecC-CcEEEEeCCCcEEEEEccCCCe--
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPS-GGIFVTGGGLDVCIWDMLGGGK-- 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~~~i~~~d~~~~~~-- 117 (239)
..+..++|++ .-..++++..|-.|++|+-.. ++...+ .....|+|++|-|. ++.++++..+.|.+|....+..
T Consensus 99 ~dlr~~aWhq-H~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeech-hhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence 4688999999 677888999999999999776 444445 35678999999994 5677777788899998753211
Q ss_pred -E----------EEEEeccCCceEEEEEcCCCCEEEEEec-CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 118 -L----------LHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 118 -~----------~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
. +.+-++| .+|+++.|++||..+++++. |..|.|||.+. ....++. .
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdt------------------g~~~pL~--~ 235 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDT------------------GQKIPLI--P 235 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCC------------------CCccccc--c
Confidence 1 1111233 68999999999999998875 56788888771 1122222 1
Q ss_pred cccCcEEEEEEccCCCeEEEEcCCceEEEEE-ccCCeeeEEecCCCCeeeeEecC
Q psy11036 186 CHHKTVTSLCLASGGKRLISASLDHHAKIYE-MVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd-~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
-.-+.++-+.|||||.+|+.+.-|+..++|. -.+.....-.-.++.|...+|+|
T Consensus 236 ~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWsp 290 (445)
T KOG2139|consen 236 KGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSP 290 (445)
T ss_pred cCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecC
Confidence 2246788999999999999999999999994 44555555555666888888887
No 213
>KOG2139|consensus
Probab=99.68 E-value=2e-14 Score=106.09 Aligned_cols=169 Identities=17% Similarity=0.193 Sum_probs=120.4
Q ss_pred CCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----Cc
Q psy11036 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----DP 77 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----~~ 77 (239)
.-...|-.|++||-.+ .....++.... ..|+|++|-|.....|+.|...| |.+|..... ..
T Consensus 114 ava~nddvVriy~kss-t~pt~Lks~sQ-------------rnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~ 178 (445)
T KOG2139|consen 114 AVATNDDVVRIYDKSS-TCPTKLKSVSQ-------------RNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRN 178 (445)
T ss_pred hhhccCcEEEEeccCC-CCCceecchhh-------------cceeEEEeccCCcceeeeeecce-eEEEEcCcccccccc
Confidence 3456788999999766 44445544321 78999999998788888888755 889986421 11
Q ss_pred e--------eee--cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe
Q psy11036 78 V--------MSV--NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 78 ~--------~~~--~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~ 145 (239)
+ ..+ +...+|+.+.|.++|..+++++ +..|.+||.. .+..+-......+.++-+.|+||+.+|.++.
T Consensus 179 ~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpd-tg~~~pL~~~glgg~slLkwSPdgd~lfaAt 257 (445)
T KOG2139|consen 179 IRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPD-TGQKIPLIPKGLGGFSLLKWSPDGDVLFAAT 257 (445)
T ss_pred cccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCC-CCCcccccccCCCceeeEEEcCCCCEEEEec
Confidence 1 111 2336899999999999999998 6899999998 5544443334457788999999999999999
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEE
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 206 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 206 (239)
-|+..++|+... ......- ..-.+.|...+|+|+|++|+-+
T Consensus 258 ~davfrlw~e~q-------------------~wt~erw-~lgsgrvqtacWspcGsfLLf~ 298 (445)
T KOG2139|consen 258 CDAVFRLWQENQ-------------------SWTKERW-ILGSGRVQTACWSPCGSFLLFA 298 (445)
T ss_pred ccceeeeehhcc-------------------cceecce-eccCCceeeeeecCCCCEEEEE
Confidence 999999996540 0111111 1124578889999999876543
No 214
>KOG1538|consensus
Probab=99.68 E-value=5.6e-16 Score=122.57 Aligned_cols=168 Identities=19% Similarity=0.263 Sum_probs=129.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..|..++|-| +|..|+.+. +..+.+||...|....++ +|+..|.+++|+.+|+.+++|+ |..|.+|...-.+ +-
T Consensus 13 hci~d~afkP-DGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG--~L 88 (1081)
T KOG1538|consen 13 HCINDIAFKP-DGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG--IL 88 (1081)
T ss_pred cchheeEECC-CCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc--ee
Confidence 3689999999 555554443 347999999999999988 7999999999999999999999 8999999875333 22
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
.. .|...|.|+.|+|-...|++++-.. .-+|... .+.+...+ ....+.+.+|..||
T Consensus 89 kY-SH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~---------------------qK~V~K~k-ss~R~~~CsWtnDG 144 (1081)
T KOG1538|consen 89 KY-SHNDAIQCMSFNPITHQLASCSLSD-FGLWSPE---------------------QKSVSKHK-SSSRIICCSWTNDG 144 (1081)
T ss_pred ee-ccCCeeeEeecCchHHHhhhcchhh-ccccChh---------------------hhhHHhhh-hheeEEEeeecCCC
Confidence 22 5999999999999999999987543 4566655 11111111 24568889999999
Q ss_pred CeEEEEcCCceEEEEEccCCeeeEEec----CCCCeeeeEecC
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPVHTLD----YPSPVLSIDVSM 239 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp 239 (239)
++|+-|-.||+|.|=+ +++++-..++ ..++|.+++|+|
T Consensus 145 qylalG~~nGTIsiRN-k~gEek~~I~Rpgg~Nspiwsi~~~p 186 (1081)
T KOG1538|consen 145 QYLALGMFNGTISIRN-KNGEEKVKIERPGGSNSPIWSICWNP 186 (1081)
T ss_pred cEEEEeccCceEEeec-CCCCcceEEeCCCCCCCCceEEEecC
Confidence 9999999999999875 4666655555 456999999997
No 215
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=6.5e-14 Score=111.75 Aligned_cols=195 Identities=11% Similarity=0.066 Sum_probs=125.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee---CCCeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS---YDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~v~vw~~~~~~~~~~~~~ 83 (239)
...|+++|.+.... +.+..+. ..+...+|+| +++.|+..+ .+..+.+|++.+++.......
T Consensus 178 ~~~l~~~d~dg~~~-~~lt~~~--------------~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~ 241 (429)
T PRK03629 178 PYELRVSDYDGYNQ-FVVHRSP--------------QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASF 241 (429)
T ss_pred ceeEEEEcCCCCCC-EEeecCC--------------CceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEEccCC
Confidence 35788888865543 3344454 7899999999 677776543 245799999988865443344
Q ss_pred CCCEEEEEEecCCcEEEEeC--CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC-CeEEEEEcccc
Q psy11036 84 GSPVESVLCLPSGGIFVTGG--GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-HHAKIYEMTLK 158 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-~~i~i~d~~~~ 158 (239)
.+.+....|+|+|+.|+... ++ .|.+||+. +++. ..+..+...+....|+|||+.|+..+.+ +...||.++
T Consensus 242 ~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~-tg~~-~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d-- 317 (429)
T PRK03629 242 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQI-RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVN-- 317 (429)
T ss_pred CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECC-CCCE-EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEE--
Confidence 45566789999999888653 34 58889987 4443 4444455567889999999988877654 444444322
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---ceEEEEEccCCeeeEEecCCCCeeee
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMVNFSPVHTLDYPSPVLSI 235 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~~v~~~ 235 (239)
+.+ ++. ..+..+........|+|||++|+..+.+ ..|.+||+.+++.. .+.......+.
T Consensus 318 ---------------~~~-g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p 379 (429)
T PRK03629 318 ---------------ING-GAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETP 379 (429)
T ss_pred ---------------CCC-CCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCCCCCc
Confidence 222 111 1222233345578899999998776543 46889999887643 33322233455
Q ss_pred EecC
Q psy11036 236 DVSM 239 (239)
Q Consensus 236 ~~sp 239 (239)
.|+|
T Consensus 380 ~~Sp 383 (429)
T PRK03629 380 SIAP 383 (429)
T ss_pred eECC
Confidence 6665
No 216
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.67 E-value=4.7e-13 Score=104.16 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=134.2
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
..+|.|.+.|..+.+.+.++.... .....+.++| +++++++++.||.|.++|+.+.+.+.++...
T Consensus 13 ~~~~~v~viD~~t~~~~~~i~~~~--------------~~h~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G 77 (369)
T PF02239_consen 13 RGSGSVAVIDGATNKVVARIPTGG--------------APHAGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVG 77 (369)
T ss_dssp GGGTEEEEEETTT-SEEEEEE-ST--------------TEEEEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-S
T ss_pred cCCCEEEEEECCCCeEEEEEcCCC--------------CceeEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecC
Confidence 457999999999999999998764 4445678899 7888888899999999999999999999877
Q ss_pred CCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEecc-------CCceEEEEEcCCCCEEEEEecC-CeEEEEE
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH-------HKTVTSLCLASGGKRLISASLD-HHAKIYE 154 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~d-~~i~i~d 154 (239)
.....++++++|++++++. .+.+.++|.+ +.++++.+... ...+..+..+|....++..-.| +.|.+.|
T Consensus 78 ~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~-tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 78 GNPRGIAVSPDGKYVYVANYEPGTVSVIDAE-TLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp SEEEEEEE--TTTEEEEEEEETTEEEEEETT-T--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred CCcceEEEcCCCCEEEEEecCCCceeEeccc-cccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 8889999999999999988 6999999998 78888877643 2356778888888766655554 7777777
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEE-cCCceEEEEEccCCeeeEEec
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.. ....+...............|+|++++++.+ ..+..|-++|.++++.+..+.
T Consensus 157 y~-------------------d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 157 YS-------------------DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALID 211 (369)
T ss_dssp TT-------------------TSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred ec-------------------cccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEee
Confidence 65 1112221222234556788999999987664 567799999999998877664
No 217
>KOG4227|consensus
Probab=99.66 E-value=1e-14 Score=108.84 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=97.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCC------CCCceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEcc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTR------SPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDML 113 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~ 113 (239)
+.|.++.|+. ++++|++|+.|..+++|++. +.+++... .|...|.|++|....+++++|+ +++|.+.|++
T Consensus 57 GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiE 135 (609)
T KOG4227|consen 57 GCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIE 135 (609)
T ss_pred cccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecc
Confidence 9999999999 79999999999999999975 45666666 3668999999999999999998 7999999998
Q ss_pred CCCeEEEEEeccC---CceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 114 GGGKLLHKFTCHH---KTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 114 ~~~~~~~~~~~~~---~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
+.+.+..+. |. +.|..+..+|..+.|++.+.++.|.+||.+
T Consensus 136 -t~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R 179 (609)
T KOG4227|consen 136 -TKQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR 179 (609)
T ss_pred -cceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence 777666664 43 489999999999999999999999999997
No 218
>KOG0644|consensus
Probab=99.66 E-value=2.6e-16 Score=126.96 Aligned_cols=92 Identities=18% Similarity=0.344 Sum_probs=82.6
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
-+.|..|+||.++++.++...++|. +.|+.++.+. +..++++++.|..|++|.+..+.++..+ +
T Consensus 208 gsdd~lvKiwS~et~~~lAs~rGhs--------------~ditdlavs~-~n~~iaaaS~D~vIrvWrl~~~~pvsvLrg 272 (1113)
T KOG0644|consen 208 GSDDRLVKIWSMETARCLASCRGHS--------------GDITDLAVSS-NNTMIAAASNDKVIRVWRLPDGAPVSVLRG 272 (1113)
T ss_pred cCccceeeeeeccchhhhccCCCCc--------------cccchhccch-hhhhhhhcccCceEEEEecCCCchHHHHhc
Confidence 3567899999999999999999999 9999999998 7889999999999999999999999888 8
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEcc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~ 113 (239)
|.+.|++++|+|-. .++.||++++||.+
T Consensus 273 htgavtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 273 HTGAVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred cccceeeeccCccc---cCCCCCceEecccc
Confidence 99999999999965 33347999999876
No 219
>KOG4497|consensus
Probab=99.66 E-value=7.2e-16 Score=112.43 Aligned_cols=183 Identities=13% Similarity=0.115 Sum_probs=133.8
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
..++.|.+|++...+-...+.... +++.++.|+|++.++|.+...|-.|.+|.+.+.+....--.+
T Consensus 68 yk~~~vqvwsl~Qpew~ckIdeg~--------------agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK 133 (447)
T KOG4497|consen 68 YKDPKVQVWSLVQPEWYCKIDEGQ--------------AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPK 133 (447)
T ss_pred eccceEEEEEeecceeEEEeccCC--------------CcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccc
Confidence 357899999998888888888887 899999999954477888888999999999987765443345
Q ss_pred CCEEEEEEecCCcEEEEeC--C--CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 85 SPVESVLCLPSGGIFVTGG--G--LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~--~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
..+..++|+|+|++.+..+ | ..+.+..-. .-..+..+.-..-..+.+.|+|||..|++- |.-
T Consensus 134 ~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~-~W~ll~~f~~dT~DltgieWsPdg~~laVw---------d~~---- 199 (447)
T KOG4497|consen 134 TNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK-AWILLKEFKLDTIDLTGIEWSPDGNWLAVW---------DNV---- 199 (447)
T ss_pred cCceeEEECCCCceeeeeecccHHHHHHHHhhH-HHHHHHhcCCCcccccCceECCCCcEEEEe---------cch----
Confidence 5679999999999999887 3 223332222 334455566666678899999999887653 321
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCe
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPV 232 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v 232 (239)
-+.+ +..++ -.-.+..++|+|.+++|+.|+.|+.+||.+--+.++..++-|...+
T Consensus 200 ---------------Leyk-v~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~ 254 (447)
T KOG4497|consen 200 ---------------LEYK-VYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSY 254 (447)
T ss_pred ---------------hhhe-eeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhc
Confidence 0001 00111 1246888999999999999999999999988888887776654433
No 220
>KOG2111|consensus
Probab=99.64 E-value=9.9e-14 Score=100.75 Aligned_cols=155 Identities=14% Similarity=0.151 Sum_probs=119.1
Q ss_pred CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcC--CCCEEE
Q psy11036 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS--GGKRLI 142 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~--~~~~l~ 142 (239)
..|.|||-...+++..+....+|.++.+.+ ..+++.-.+.|.+|......+.++.+.....|=--++..| +...||
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I~~V~l~r--~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~La 152 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEIKAVKLRR--DRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLA 152 (346)
T ss_pred ceEEEEecccCcEEEEEEeccceeeEEEcC--CeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEE
Confidence 479999977788888888999999999985 4788888999999999766666666654333322333444 334455
Q ss_pred E-EecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCce-EEEEEccCC
Q psy11036 143 S-ASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH-AKIYEMVNF 220 (239)
Q Consensus 143 ~-~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~-i~iwd~~~~ 220 (239)
. |-.-|.|.|-|+. .+.......+.+|.+.|.+++.+-+|..+||+|..|+ |||||..+|
T Consensus 153 fPg~k~GqvQi~dL~------------------~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g 214 (346)
T KOG2111|consen 153 FPGFKTGQVQIVDLA------------------STKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDG 214 (346)
T ss_pred cCCCccceEEEEEhh------------------hcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCC
Confidence 4 3456888888877 1111134566899999999999999999999999997 799999999
Q ss_pred eeeEEec---CCCCeeeeEecC
Q psy11036 221 SPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 221 ~~~~~~~---~~~~v~~~~~sp 239 (239)
++++++. ....|.+|+|||
T Consensus 215 ~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 215 TLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred cEeeeeecCCchheEEEEEeCC
Confidence 9999998 456899999997
No 221
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=3e-13 Score=107.65 Aligned_cols=195 Identities=12% Similarity=0.061 Sum_probs=117.6
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCC----eEEEEeCCCC---Ccee
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDK----TVNVYDTRSP---DPVM 79 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg----~v~vw~~~~~---~~~~ 79 (239)
..|++.++.+++..+.. ... +.....+|+| +++.|+..+ .+| .+..|++..+ +...
T Consensus 211 ~~I~~~~l~~g~~~~lt-~~~--------------g~~~~p~wSP-DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~ 274 (428)
T PRK01029 211 PKIFLGSLENPAGKKIL-ALQ--------------GNQLMPTFSP-RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRR 274 (428)
T ss_pred ceEEEEECCCCCceEee-cCC--------------CCccceEECC-CCCEEEEEECCCCCcceeEEEeecccCCCCcceE
Confidence 35666677666543322 222 4455789999 676665433 223 3445776653 3333
Q ss_pred eecC-CCCEEEEEEecCCcEEEEeC--CCcEEEE--EccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC---CeEE
Q psy11036 80 SVNH-GSPVESVLCLPSGGIFVTGG--GLDVCIW--DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAK 151 (239)
Q Consensus 80 ~~~~-~~~v~~~~~~~~~~~l~~~~--~~~i~~~--d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---~~i~ 151 (239)
.... .......+|+|+|+.|+..+ ++...+| ++...+.....+..+...+....|+|||+.|+..+.+ ..|.
T Consensus 275 lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~ 354 (428)
T PRK01029 275 LLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQIC 354 (428)
T ss_pred eecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEE
Confidence 3322 23446789999999887665 4655555 4432223344455455667789999999998876643 2455
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC---CceEEEEEccCCeeeEEecC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL---DHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~ 228 (239)
+||+. + ++.. .+......+....|+|||+.|+..+. ...|+++|+.+++.......
T Consensus 355 v~dl~-------------------~-g~~~-~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~ 413 (428)
T PRK01029 355 VYDLA-------------------T-GRDY-QLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIG 413 (428)
T ss_pred EEECC-------------------C-CCeE-EccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC
Confidence 55554 2 2221 22222334567899999998764432 45788999988776555555
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
.+.+...+|+|
T Consensus 414 ~g~~~~p~Ws~ 424 (428)
T PRK01029 414 SGEKRFPSWGA 424 (428)
T ss_pred CCcccCceecC
Confidence 66677888887
No 222
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.63 E-value=2.1e-13 Score=108.99 Aligned_cols=177 Identities=14% Similarity=0.133 Sum_probs=119.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---KTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~~~~~~~~~~~ 83 (239)
...|+++|..... .+.+..+. ..+...+|+| +++.|+....+ ..|++||+.+++......+
T Consensus 169 ~~~l~~~d~~g~~-~~~l~~~~--------------~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~ 232 (417)
T TIGR02800 169 RYELQVADYDGAN-PQTITRSR--------------EPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREKVASF 232 (417)
T ss_pred cceEEEEcCCCCC-CEEeecCC--------------CceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEeecC
Confidence 4567888875443 34444454 6788999999 78877766543 4799999998866544455
Q ss_pred CCCEEEEEEecCCcEEEEeC--C--CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC-C--eEEEEEcc
Q psy11036 84 GSPVESVLCLPSGGIFVTGG--G--LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-H--HAKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~--~--~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-~--~i~i~d~~ 156 (239)
...+.+++|+|+++.++... + ..|.+||+. .++ ...+..+........|+|+|+.|+..+.. + .|.++|+.
T Consensus 233 ~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~-~~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~ 310 (417)
T TIGR02800 233 PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLD-GKQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD 310 (417)
T ss_pred CCCccceEECCCCCEEEEEECCCCCccEEEEECC-CCC-EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence 66677899999998776543 3 458888886 333 34444455555678899999988776543 3 34444443
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc---eEEEEEccCCee
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMVNFSP 222 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~ 222 (239)
+ .+ ...+..+...+....|+|+|++++.++.++ .|.+||+.++..
T Consensus 311 -------------------~-~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 311 -------------------G-GE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred -------------------C-CC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 2 11 122233345567789999999998887765 789999887543
No 223
>KOG1587|consensus
Probab=99.63 E-value=1.6e-14 Score=115.96 Aligned_cols=196 Identities=15% Similarity=0.096 Sum_probs=140.1
Q ss_pred CCCCCCCEEEEeeCCCcce-eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---
Q psy11036 2 SHDLPILIVALWDIPSEAQ-VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP--- 77 (239)
Q Consensus 2 s~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~--- 77 (239)
...+.||.|..|+++.-.. .......... ....-......+++++|.+.+.+.++.|+..|.|..-+-...+.
T Consensus 309 ~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~---~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~ 385 (555)
T KOG1587|consen 309 FSLSSDGSICSWDTDMLSLPVEGLLLESKK---HKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPE 385 (555)
T ss_pred EEEecCCcEeeeeccccccchhhccccccc---ccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccc
Confidence 3456799999998765322 1111110000 00000011157899999998889999999999988744332221
Q ss_pred -----eeee-cCCCCEEEEEEecCCc-EEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCe
Q psy11036 78 -----VMSV-NHGSPVESVLCLPSGG-IFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHH 149 (239)
Q Consensus 78 -----~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~ 149 (239)
...+ .|.++|.++.++|-+. .+.+++|-++++|.......++..+..+...+++++|||.. ..|+++..||.
T Consensus 386 ~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~ 465 (555)
T KOG1587|consen 386 VSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGN 465 (555)
T ss_pred ccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCc
Confidence 1122 4889999999999655 55566699999999875566777777788889999999955 67888889999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+.+||+. .....++.+...+......+.|+++|+.|++|...|++.+|++.
T Consensus 466 l~iWDLl------------------~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 466 LDIWDLL------------------QDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred eehhhhh------------------ccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 9999998 22345555555556677888899999999999999999999985
No 224
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.62 E-value=4e-13 Score=104.56 Aligned_cols=216 Identities=15% Similarity=0.128 Sum_probs=137.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe-eCCCeEEEEeCCCCCceeeec--
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG-SYDKTVNVYDTRSPDPVMSVN-- 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~v~vw~~~~~~~~~~~~-- 82 (239)
+||.|.++|+.+++.+.+++.. ....++++++ ++++++++ ..++.+.++|.++.+++..+.
T Consensus 56 rdg~vsviD~~~~~~v~~i~~G---------------~~~~~i~~s~-DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~ 119 (369)
T PF02239_consen 56 RDGTVSVIDLATGKVVATIKVG---------------GNPRGIAVSP-DGKYVYVANYEPGTVSVIDAETLEPVKTIPTG 119 (369)
T ss_dssp TTSEEEEEETTSSSEEEEEE-S---------------SEEEEEEE---TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred CCCeEEEEECCcccEEEEEecC---------------CCcceEEEcC-CCCEEEEEecCCCceeEeccccccceeecccc
Confidence 4899999999999999999887 4577999999 77777765 468999999999999888773
Q ss_pred ------CCCCEEEEEEecCCcEEEEe-CC-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEE
Q psy11036 83 ------HGSPVESVLCLPSGGIFVTG-GG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIY 153 (239)
Q Consensus 83 ------~~~~v~~~~~~~~~~~l~~~-~~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~ 153 (239)
...++.++..+|....+++. .+ +.|.+.|......................|+|++++++++ ..++.|-++
T Consensus 120 ~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~vi 199 (369)
T PF02239_consen 120 GMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVI 199 (369)
T ss_dssp EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEE
T ss_pred cccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEE
Confidence 23467888888888755544 45 8888888764433333333345567889999999987664 457788899
Q ss_pred Ecc-cceEeeee-c---------------ce-------------------eEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 154 EMT-LKTVSSFT-G---------------GL-------------------DVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 154 d~~-~~~~~~~~-~---------------~~-------------------~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
|.+ .+.+..+. | .+ .+.+||... .+.+..+.....+ .-+..+
T Consensus 200 D~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~-wkvv~~I~~~G~g-lFi~th 277 (369)
T PF02239_consen 200 DTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYA-WKVVKTIPTQGGG-LFIKTH 277 (369)
T ss_dssp ETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTB-TSEEEEEE-SSSS---EE--
T ss_pred eeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhc-CeEEEEEECCCCc-ceeecC
Confidence 988 43333220 0 00 011222222 4456666665555 677889
Q ss_pred cCCCeEEEE----cCCceEEEEEccCCeeeEEecCC--CCeeeeEecC
Q psy11036 198 SGGKRLISA----SLDHHAKIYEMVNFSPVHTLDYP--SPVLSIDVSM 239 (239)
Q Consensus 198 ~~~~~l~s~----s~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp 239 (239)
|+++++... .....|.++|.++.+.+.++... ..+..+.|+|
T Consensus 278 P~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~ 325 (369)
T PF02239_consen 278 PDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNP 325 (369)
T ss_dssp TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-T
T ss_pred CCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECC
Confidence 999999887 45689999999999988888732 3488888775
No 225
>KOG1240|consensus
Probab=99.62 E-value=4.8e-14 Score=118.24 Aligned_cols=193 Identities=18% Similarity=0.208 Sum_probs=137.7
Q ss_pred eeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------ceeee-cCC
Q psy11036 13 WDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-------PVMSV-NHG 84 (239)
Q Consensus 13 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~-~~~ 84 (239)
|+. .|..+..+..|. ..+..++.++.++.++++|+.||+|++||.+.-. ...++ ...
T Consensus 1034 W~p-~G~lVAhL~Ehs--------------~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~ 1098 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHS--------------SAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEG 1098 (1431)
T ss_pred CCc-cceEeehhhhcc--------------ccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccC
Confidence 444 567777788887 8888999998566999999999999999986421 22233 267
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCC-Ce-----EEEEEecc-CCceEEE-EEcC-CCC-EEEEEecCCeEEEE
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG-GK-----LLHKFTCH-HKTVTSL-CLAS-GGK-RLISASLDHHAKIY 153 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~-~~-----~~~~~~~~-~~~i~~i-~~~~-~~~-~l~~~~~d~~i~i~ 153 (239)
.++.++.+.+.+..+|+++ ||.|.+.++... .. .......+ .+.+.++ ++.. .+. .++.+..-+.|..|
T Consensus 1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence 8899999999999999998 899999998731 11 11111112 2233333 3332 223 57777778888888
Q ss_pred Ecc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC--C
Q psy11036 154 EMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP--S 230 (239)
Q Consensus 154 d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~ 230 (239)
|++ .....++ ......+.|++++.+|.+++++.|...|.+.+||++-+.++.++.++ .
T Consensus 1179 D~r~~~~~w~l-------------------k~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~ 1239 (1431)
T KOG1240|consen 1179 DTRMRHDAWRL-------------------KNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARA 1239 (1431)
T ss_pred cchhhhhHHhh-------------------hcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccC
Confidence 887 2211111 11334578999999999999999999999999999999999988854 4
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
+++.++.+|
T Consensus 1240 ~i~~v~~~~ 1248 (1431)
T KOG1240|consen 1240 PIRHVWLCP 1248 (1431)
T ss_pred CcceEEeec
Confidence 777777665
No 226
>KOG2394|consensus
Probab=99.61 E-value=3.5e-15 Score=115.13 Aligned_cols=101 Identities=15% Similarity=0.243 Sum_probs=85.4
Q ss_pred Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 76 DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 76 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
.++..+ -.++.|...+|+|||++||+.+ ||.++|+|.. ..+++..++..-+...|++|+|||++|++|++|..|.||
T Consensus 281 NPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fd-t~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVw 359 (636)
T KOG2394|consen 281 NPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFD-TQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW 359 (636)
T ss_pred CccceeEeccccccceeEcCCCceEEEEecCceEEEeecc-HHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEE
Confidence 344444 2456899999999999999999 8999999998 777888888888999999999999999999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
.+. ..+.+..-++|.++|..++|.
T Consensus 360 Sf~--------------------erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 360 SFE--------------------ERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred Eec--------------------cceEEEeccccccceeeEeec
Confidence 998 456666667777777777776
No 227
>KOG4547|consensus
Probab=99.59 E-value=7.3e-13 Score=103.42 Aligned_cols=162 Identities=19% Similarity=0.243 Sum_probs=131.7
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeec----CCCCEEEEEEe------c--------------CCcEEEEeC-CCcEE
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN----HGSPVESVLCL------P--------------SGGIFVTGG-GLDVC 108 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~----~~~~v~~~~~~------~--------------~~~~l~~~~-~~~i~ 108 (239)
...+++....||.+++|++.+++....+. ..+..++..|. | +...++-|. .|.|.
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~ 83 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL 83 (541)
T ss_pred hhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence 56789999999999999999988776662 33444555542 1 223455555 69999
Q ss_pred EEEccCCCeEEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 109 IWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
+|+.. .++....+. .|.+.|.++.++.+-..|.+++.|+.+..|+.. ..+..+..++
T Consensus 84 ~ys~~-~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~--------------------~~~~~~~~~~ 142 (541)
T KOG4547|consen 84 LYSVA-GGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEK--------------------EKVIIRIWKE 142 (541)
T ss_pred EEEec-CCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecc--------------------cceeeeeecc
Confidence 99998 777776665 688999999999999999999999999999988 4555666667
Q ss_pred ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
....+.+++.+|||..|++++ +.|++||+++++.+..+. |.++|++++|-
T Consensus 143 ~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~ 193 (541)
T KOG4547|consen 143 QKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFT 193 (541)
T ss_pred CCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEE
Confidence 777899999999999999986 589999999999999999 88999999883
No 228
>KOG0642|consensus
Probab=99.59 E-value=1.1e-14 Score=112.89 Aligned_cols=131 Identities=21% Similarity=0.300 Sum_probs=107.1
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC-------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG-------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
.|...++.++|+|....+++++ +|.+++|++.. .-+++.++.+|.++|.|+++.+++.++.+|+.||+|+.|
T Consensus 292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w 371 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCW 371 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeee
Confidence 3677888999999999999999 89999999932 235788999999999999999999999999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
++... .--+|..........+.||...|+.+++|+....|++++.||+++.|+.....+
T Consensus 372 ~~p~n----------~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 372 NLPPN----------QDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred ccCCC----------CCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 87600 001111112234456789999999999999999999999999999999876666
No 229
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.58 E-value=8.7e-13 Score=105.45 Aligned_cols=190 Identities=15% Similarity=0.110 Sum_probs=122.0
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCC--eEEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDK--TVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg--~v~vw~~~~~~~~~~~~~~ 84 (239)
..|++||+.+++... +..+. +.+.+++|+| +++.| ++.+.++ .|.+|++.+++......+.
T Consensus 214 ~~i~v~d~~~g~~~~-~~~~~--------------~~~~~~~~sp-Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 277 (417)
T TIGR02800 214 PEIYVQDLATGQREK-VASFP--------------GMNGAPAFSP-DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGP 277 (417)
T ss_pred cEEEEEECCCCCEEE-eecCC--------------CCccceEECC-CCCEEEEEECCCCCccEEEEECCCCCEEECCCCC
Confidence 579999998876543 33333 5567789999 56655 4555444 5888998877654433444
Q ss_pred CCEEEEEEecCCcEEEEeC--CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEEccc
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMTL 157 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~---~i~i~d~~~ 157 (239)
.......|+|+++.++..+ .+ .|.++|+. .++ ...+..+......+.|+|+|++++.++.++ .|.+||+.
T Consensus 278 ~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~-~~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~- 354 (417)
T TIGR02800 278 GIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD-GGE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLD- 354 (417)
T ss_pred CCCCCEEECCCCCEEEEEECCCCCceEEEEECC-CCC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCC-
Confidence 4455778999999887665 23 57777776 333 344444556677889999999999888765 56666665
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc---eEEEEEccCCeeeEEec-CCCCee
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH---HAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+ +.. ..+... .......|+|||+.|+..+.++ .+++.+. +++....+. ..+.+.
T Consensus 355 ------------------~-~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~ 412 (417)
T TIGR02800 355 ------------------G-GGE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVR 412 (417)
T ss_pred ------------------C-CCe-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcC
Confidence 1 111 111111 1234558999999888776543 4566554 455556665 355677
Q ss_pred eeEec
Q psy11036 234 SIDVS 238 (239)
Q Consensus 234 ~~~~s 238 (239)
.++|+
T Consensus 413 ~~~ws 417 (417)
T TIGR02800 413 EPAWS 417 (417)
T ss_pred CCCCC
Confidence 77774
No 230
>KOG1240|consensus
Probab=99.58 E-value=4.2e-13 Score=112.75 Aligned_cols=206 Identities=14% Similarity=0.131 Sum_probs=136.6
Q ss_pred CCCCCCCCEEEEeeCCCcc-------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q psy11036 1 MSHDLPILIVALWDIPSEA-------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 73 (239)
|.+.+.||+|++||...-. ...++.... ..+.++...+ +++.+|.++.||.|++.++.
T Consensus 1064 FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~--------------sr~~~vt~~~-~~~~~Av~t~DG~v~~~~id 1128 (1431)
T KOG1240|consen 1064 FVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEG--------------SRVEKVTMCG-NGDQFAVSTKDGSVRVLRID 1128 (1431)
T ss_pred EEEecCCceEEEeeehhhhcCcceeeeeEEEeccC--------------CceEEEEecc-CCCeEEEEcCCCeEEEEEcc
Confidence 5567889999999986421 222333223 7899999999 89999999999999999987
Q ss_pred CCCc-------eeee--cCCCCEEEEE-Eec-CCc-EEEEeC-CCcEEEEEccCCCeEEEEE--eccCCceEEEEEcCCC
Q psy11036 74 SPDP-------VMSV--NHGSPVESVL-CLP-SGG-IFVTGG-GLDVCIWDMLGGGKLLHKF--TCHHKTVTSLCLASGG 138 (239)
Q Consensus 74 ~~~~-------~~~~--~~~~~v~~~~-~~~-~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~--~~~~~~i~~i~~~~~~ 138 (239)
.... .+.. ...+.+..+. +.. ... .++.+. -+.|..||++ ......++ ....+.|++++.+|.+
T Consensus 1129 ~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r-~~~~~w~lk~~~~hG~vTSi~idp~~ 1207 (1431)
T KOG1240|consen 1129 HYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTR-MRHDAWRLKNQLRHGLVTSIVIDPWC 1207 (1431)
T ss_pred ccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecch-hhhhHHhhhcCccccceeEEEecCCc
Confidence 5211 1111 2334454443 322 233 555555 4889999998 33333222 2345789999999999
Q ss_pred CEEEEEecCCeEEEEEcc-cceEeee----------------------------ecceeEEEEEccCCCEEEEEEec---
Q psy11036 139 KRLISASLDHHAKIYEMT-LKTVSSF----------------------------TGGLDVCIWDMLGGGKLLHKFTC--- 186 (239)
Q Consensus 139 ~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------------~~~~~i~~~d~~~~~~~~~~~~~--- 186 (239)
.+++.|+..|.+.+||++ ...+.+. ++.+.+.+|++.++ .....+-.
T Consensus 1208 ~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g-~~~~vl~~s~~ 1286 (1431)
T KOG1240|consen 1208 NWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETG-LRQTVLWASDG 1286 (1431)
T ss_pred eEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccC-cceEEEEcCCC
Confidence 999999999999999999 4444333 24566999998875 22222211
Q ss_pred ----------------ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 187 ----------------HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 187 ----------------h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
+.-......+..-+.++.+|+.|..||.||....+..
T Consensus 1287 ~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1287 APILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred CcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence 1111222334445678999999999999998765443
No 231
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=7.8e-13 Score=106.05 Aligned_cols=191 Identities=16% Similarity=0.132 Sum_probs=114.9
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCe--EEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKT--VNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~--v~vw~~~~~~~~~~~~~~ 84 (239)
..|++||+.+++... +.... +.....+|+| +++.| ++.+.++. |.++|+.+++......+.
T Consensus 242 ~~L~~~dl~tg~~~~-lt~~~--------------g~~~~~~wSP-DG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~ 305 (448)
T PRK04792 242 AEIFVQDIYTQVREK-VTSFP--------------GINGAPRFSP-DGKKLALVLSKDGQPEIYVVDIATKALTRITRHR 305 (448)
T ss_pred cEEEEEECCCCCeEE-ecCCC--------------CCcCCeeECC-CCCEEEEEEeCCCCeEEEEEECCCCCeEECccCC
Confidence 368888887776432 22212 3344789999 56655 45566664 777888877654433445
Q ss_pred CCEEEEEEecCCcEEEEeC--CCc--EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC-CeEEE--EEccc
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-HHAKI--YEMTL 157 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~--i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-~~i~i--~d~~~ 157 (239)
.......|+|+++.++..+ ++. |.++|+. .++. ..+..........+|+|||++|+..+.+ +...| +|+.
T Consensus 306 ~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~-~g~~-~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~- 382 (448)
T PRK04792 306 AIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA-SGKV-SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLE- 382 (448)
T ss_pred CCccceEECCCCCEEEEEECCCCCceEEEEECC-CCCE-EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECC-
Confidence 5567789999999887766 344 5556665 3433 3332222233457899999988876553 33333 3433
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-Cc--eEEEEEccCCeeeEEec-CCCCee
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~--~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+. +. ..+... .......|+|||+.|+..+. ++ .+++++. +|+....+. ..+.+.
T Consensus 383 ------------------~g-~~-~~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~ 440 (448)
T PRK04792 383 ------------------TG-AM-QVLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVK 440 (448)
T ss_pred ------------------CC-Ce-EEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcC
Confidence 21 11 111111 11123479999998876554 33 4777776 566666666 456788
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
..+|+|
T Consensus 441 ~p~Wsp 446 (448)
T PRK04792 441 SPAWSP 446 (448)
T ss_pred CCccCC
Confidence 899987
No 232
>KOG4547|consensus
Probab=99.57 E-value=1.1e-12 Score=102.53 Aligned_cols=185 Identities=17% Similarity=0.282 Sum_probs=146.4
Q ss_pred CCCCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEe------cC-------------CCCEEEEe
Q psy11036 1 MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS------PV-------------SSDIVISG 61 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~-------------~~~~l~s~ 61 (239)
|+-+..||.+++||..+++....|..... -.+..++..|. |. +...++-|
T Consensus 8 ~A~~~~~g~l~iw~t~~~~~~~e~~p~~~-----------~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlg 76 (541)
T KOG4547|consen 8 FALSTGDGRLRIWDTAKNQLQQEFAPIAS-----------LSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLG 76 (541)
T ss_pred EeecCCCCeEEEEEccCceeeeeeccchh-----------ccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEee
Confidence 34456799999999999988777754210 00333444442 11 34567888
Q ss_pred eCCCeEEEEeCCCCCceeee---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC
Q psy11036 62 SYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 137 (239)
Q Consensus 62 ~~dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~ 137 (239)
...|.|.+|++..++....+ .|.+.|.++.++.+-..+.+++ |..+..|+.. ....+...+.....+.+++.+||
T Consensus 77 t~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~-~~~~~~~~~~~~~~~~sl~is~D 155 (541)
T KOG4547|consen 77 TPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEK-EKVIIRIWKEQKPLVSSLCISPD 155 (541)
T ss_pred cCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecc-cceeeeeeccCCCccceEEEcCC
Confidence 89999999999999888777 4899999999999888999888 7999999998 88889999988899999999999
Q ss_pred CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-----CCeEEEE-cCCce
Q psy11036 138 GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-----GKRLISA-SLDHH 211 (239)
Q Consensus 138 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-----~~~l~s~-s~d~~ 211 (239)
|..+++++ +.|++||++ +.+.+..+.+|.++|.++.|-.+ |.+++++ ..+.-
T Consensus 156 ~~~l~~as--~~ik~~~~~--------------------~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~ 213 (541)
T KOG4547|consen 156 GKILLTAS--RQIKVLDIE--------------------TKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERG 213 (541)
T ss_pred CCEEEecc--ceEEEEEcc--------------------CceEEEEecCCCcceEEEEEEEeccccccceeeeccccccc
Confidence 99999885 588888887 68888889999999999999887 6666655 34556
Q ss_pred EEEEEccC
Q psy11036 212 AKIYEMVN 219 (239)
Q Consensus 212 i~iwd~~~ 219 (239)
+.+|-+..
T Consensus 214 i~~w~v~~ 221 (541)
T KOG4547|consen 214 ITVWVVEK 221 (541)
T ss_pred eeEEEEEc
Confidence 77776543
No 233
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=4.4e-12 Score=101.08 Aligned_cols=200 Identities=13% Similarity=0.046 Sum_probs=121.7
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCE---EEEeeCC--CeEEEEeCCCCCceeee
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDI---VISGSYD--KTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---l~s~~~d--g~v~vw~~~~~~~~~~~ 81 (239)
.+.|++.|.+.+... .+.... ....+-+|+| +++. +.+...+ ..|.+.++.+++.....
T Consensus 164 ~~~l~~~d~dG~~~~-~lt~~~--------------~~~~sP~wSP-DG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt 227 (428)
T PRK01029 164 QGELWSVDYDGQNLR-PLTQEH--------------SLSITPTWMH-IGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL 227 (428)
T ss_pred cceEEEEcCCCCCce-EcccCC--------------CCcccceEcc-CCCceEEEEEEccCCCceEEEEECCCCCceEee
Confidence 457778887655443 343343 5667889999 5543 2244444 36778888877655444
Q ss_pred cCCCCEEEEEEecCCcEEEEeC--CC--cE--EEEEccCC--CeEEEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG--GL--DV--CIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKI 152 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~--~~--~i--~~~d~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i 152 (239)
...+.....+|+|||+.|+... +| .+ ..|++... +................+|+|||+.|+..+ .+|...+
T Consensus 228 ~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~l 307 (428)
T PRK01029 228 ALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRI 307 (428)
T ss_pred cCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceE
Confidence 5556666789999999888765 23 33 33666521 233333322233446789999999888765 4565444
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---ceEEEEEccCCeeeEEecCC
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMVNFSPVHTLDYP 229 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~ 229 (239)
|.+. +...+.....+..+...+....|||||+.|+..+.+ ..|.+||+.+++........
T Consensus 308 y~~~-----------------~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~ 370 (428)
T PRK01029 308 YIMQ-----------------IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSP 370 (428)
T ss_pred EEEE-----------------CcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCC
Confidence 4332 111111222333344556788999999988866543 47999999888764433333
Q ss_pred CCeeeeEecC
Q psy11036 230 SPVLSIDVSM 239 (239)
Q Consensus 230 ~~v~~~~~sp 239 (239)
..+.+..|+|
T Consensus 371 ~~~~~p~wSp 380 (428)
T PRK01029 371 ENKESPSWAI 380 (428)
T ss_pred CCccceEECC
Confidence 4566777776
No 234
>KOG0280|consensus
Probab=99.56 E-value=3.5e-12 Score=91.99 Aligned_cols=201 Identities=9% Similarity=0.027 Sum_probs=144.0
Q ss_pred CCCEEEEeeCCCcceee--eeeC-CceeeccceeeccCCCCCeEEEEEec--CCCC-EEEEeeCCCeEEEEeCCCCCcee
Q psy11036 6 PILIVALWDIPSEAQVS--TFTN-HTTIYKVPLMLYSTPQDYVRAGTVSP--VSSD-IVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~-~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
+-|.+.+|++.+.+... +++. .. ..+..+.|.- .++. .++-+-.+|.|.++.........
T Consensus 44 R~Gkl~Lys~~d~~~~~l~~~q~~dt--------------s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~ 109 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSPLDTLQCTDT--------------STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSV 109 (339)
T ss_pred eccceEEEeecccccCccceeeeecc--------------cccceeeeeeccCCccceeeeccccceEEEEeeccceeee
Confidence 45788999887665433 2221 12 5677777763 2444 56667778999998865443333
Q ss_pred eec------C-CCCEEEEEEecCCcEEEEeC-CCcEEEEEcc-CCCeEEEEEeccCCceEEEEEcCC-CCEEEEEecCCe
Q psy11036 80 SVN------H-GSPVESVLCLPSGGIFVTGG-GLDVCIWDML-GGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHH 149 (239)
Q Consensus 80 ~~~------~-~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~-~~~~~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~ 149 (239)
.+. . .....++.|++.+..++++. +|.+.+-+.. ..-+..++.+.|.-++....|+.. .+.+.+|+.|+.
T Consensus 110 ~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~ 189 (339)
T KOG0280|consen 110 HLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGS 189 (339)
T ss_pred eecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCce
Confidence 331 1 11356788999888888887 5888855443 123344578899999999999764 468899999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEE-EEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEcc-CCeeeEEe
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLL-HKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMV-NFSPVHTL 226 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~-~~~~~~~~ 226 (239)
+..||++ ..++.+ ...+-|...|.++.-+| .+.+++||+.|-.|++||.+ -++++..-
T Consensus 190 l~~~D~R-------------------~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~ 250 (339)
T KOG0280|consen 190 LSCWDIR-------------------IPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA 250 (339)
T ss_pred EEEEEec-------------------CCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC
Confidence 9999988 111222 22456889999998887 57899999999999999998 58899888
Q ss_pred cCCCCeeeeEecC
Q psy11036 227 DYPSPVLSIDVSM 239 (239)
Q Consensus 227 ~~~~~v~~~~~sp 239 (239)
+..+.|+-+.++|
T Consensus 251 ~v~GGVWRi~~~p 263 (339)
T KOG0280|consen 251 KVGGGVWRIKHHP 263 (339)
T ss_pred ccccceEEEEecc
Confidence 8889999999887
No 235
>KOG2321|consensus
Probab=99.56 E-value=1.9e-13 Score=106.56 Aligned_cols=177 Identities=16% Similarity=0.224 Sum_probs=136.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--- 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--- 82 (239)
....|+-+|++.|+.+..|.... +.+.++..++ ...+|++|+.+|.|..||.+....+..+.
T Consensus 153 sg~evYRlNLEqGrfL~P~~~~~--------------~~lN~v~in~-~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~ 217 (703)
T KOG2321|consen 153 SGSEVYRLNLEQGRFLNPFETDS--------------GELNVVSINE-EHGLLACGTEDGVVEFWDPRDKSRVGTLDAAS 217 (703)
T ss_pred cCcceEEEEcccccccccccccc--------------ccceeeeecC-ccceEEecccCceEEEecchhhhhheeeeccc
Confidence 34567788888888888888777 8999999999 78899999999999999999887766652
Q ss_pred ----CCC-----CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC--CEEEEEecCCeE
Q psy11036 83 ----HGS-----PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG--KRLISASLDHHA 150 (239)
Q Consensus 83 ----~~~-----~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i 150 (239)
+++ .|+++.|+.+|-.+++|. +|.+.+||++.....+..-....-+|..+.|.+.+ ..+++. ....+
T Consensus 218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~ 296 (703)
T KOG2321|consen 218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRIL 296 (703)
T ss_pred ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHh
Confidence 222 399999999999999998 79999999995444444444455689999998753 344444 45677
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+|||-. .+++...+.. ...+..+|+-|++.+++++-.++.+..|=+..
T Consensus 297 kiWd~~--------------------~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 297 KIWDEC--------------------TGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred hhcccc--------------------cCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 788766 4555555554 45599999999999999999888877765543
No 236
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=7.4e-12 Score=100.45 Aligned_cols=209 Identities=15% Similarity=0.073 Sum_probs=131.3
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeeecCCC
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---KTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~v~vw~~~~~~~~~~~~~~~ 85 (239)
.|.++|.+.+.. +.+..+. ..+...+|+| +++.|+..+.+ ..|.+|++.+++........+
T Consensus 180 ~l~~~d~~g~~~-~~l~~~~--------------~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g 243 (430)
T PRK00178 180 TLQRSDYDGARA-VTLLQSR--------------EPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEG 243 (430)
T ss_pred EEEEECCCCCCc-eEEecCC--------------CceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCC
Confidence 577778765443 4454555 7789999999 67777655433 368999998887544334445
Q ss_pred CEEEEEEecCCcEEEEeC--CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CC--eEEEEEcccc
Q psy11036 86 PVESVLCLPSGGIFVTGG--GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMTLK 158 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~--~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~--~i~i~d~~~~ 158 (239)
......|+|+|+.++... ++ .|.++|+. +++ ...+..+........|+|||+.++..+. ++ .|.++++.+.
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~-~~~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLA-SRQ-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCCCceEEEEECC-CCC-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 566789999999887543 33 58888887 443 3445555556677899999998776654 33 5666676521
Q ss_pred eEeee-------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---c
Q psy11036 159 TVSSF-------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---H 210 (239)
Q Consensus 159 ~~~~~-------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~ 210 (239)
....+ .+...+.++|+.+..... +.. ........|+|||+.++..+.+ .
T Consensus 322 ~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~--lt~-~~~~~~p~~spdg~~i~~~~~~~g~~ 398 (430)
T PRK00178 322 RAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI--LTD-TSLDESPSVAPNGTMLIYATRQQGRG 398 (430)
T ss_pred CEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE--ccC-CCCCCCceECCCCCEEEEEEecCCce
Confidence 11111 112236677776543222 111 1122345899999988766543 3
Q ss_pred eEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 211 HAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+.++++. +.....+. ..+.+...+|+|
T Consensus 399 ~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 399 VLMLVSIN-GRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred EEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 56777774 44444555 446788888887
No 237
>KOG2315|consensus
Probab=99.54 E-value=1.8e-12 Score=100.84 Aligned_cols=167 Identities=19% Similarity=0.301 Sum_probs=121.1
Q ss_pred EEEEEecCCCCEEEEeeCC-----------CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC---CCcEEEEE
Q psy11036 46 RAGTVSPVSSDIVISGSYD-----------KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG---GLDVCIWD 111 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~~~d-----------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d 111 (239)
..+.|++.+..+|+.++.| .++.++++........+...++|.++.|+|+++-+++.. =-.+.+||
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifn 300 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFN 300 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEc
Confidence 3678888444455544332 368888887545555667789999999999998777665 37899999
Q ss_pred ccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC---CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
++ +.++..+. .++-.++-|+|.|++++.+|.+ |.|-+||+. + .+++..+...
T Consensus 301 lr--~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~-------------------n-~K~i~~~~a~- 355 (566)
T KOG2315|consen 301 LR--GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVP-------------------N-RKLIAKFKAA- 355 (566)
T ss_pred CC--CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEecc-------------------c-hhhccccccC-
Confidence 96 67776664 5677889999999999998876 556666655 3 5555555543
Q ss_pred CcEEEEEEccCCCeEEEEcC------CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 189 KTVTSLCLASGGKRLISASL------DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.-+-..|+|||++++|+.. |+.++||+. +|..+.....++....++|-|
T Consensus 356 -~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 356 -NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKMFKSELLQVEWRP 410 (566)
T ss_pred -CceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhhhhHhHhheeeee
Confidence 3445789999999998875 788999998 777777665554566666643
No 238
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.54 E-value=1.6e-10 Score=88.55 Aligned_cols=200 Identities=14% Similarity=0.104 Sum_probs=137.5
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee---------CCCeEEEEeCCCCCce
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS---------YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~v~vw~~~~~~~~ 78 (239)
+.|.+.|.++++.+.++.... .+- .+ ++|++..+.++.+ .+..|.+||..+.+.+
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~--------------~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~ 90 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGF--------------LPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPI 90 (352)
T ss_pred ceEEEEECCCCEEEEEEEccC--------------CCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEE
Confidence 899999999999999998775 333 34 9994344444555 5789999999999999
Q ss_pred eeecCCCC--------EEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEecc------------------CC--
Q psy11036 79 MSVNHGSP--------VESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCH------------------HK-- 127 (239)
Q Consensus 79 ~~~~~~~~--------v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~------------------~~-- 127 (239)
..+..+.. ...++++|+|+++++.. +..|.+.|+. .++.+.++.-. .+
T Consensus 91 ~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~-~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~ 169 (352)
T TIGR02658 91 ADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE-GKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSL 169 (352)
T ss_pred eEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECC-CCcEEEEEeCCCCcEEEEecCCccEEEeecCce
Confidence 88854333 34789999999999877 5889999997 44433332100 00
Q ss_pred -----------ceEEE--------------EEcC-CCCEEEEEecCCeEEEEEcc------cceEeee------------
Q psy11036 128 -----------TVTSL--------------CLAS-GGKRLISASLDHHAKIYEMT------LKTVSSF------------ 163 (239)
Q Consensus 128 -----------~i~~i--------------~~~~-~~~~l~~~~~d~~i~i~d~~------~~~~~~~------------ 163 (239)
..... .|.+ +|+++....+ |.|.+.|+. ......+
T Consensus 170 ~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~ 248 (352)
T TIGR02658 170 AKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPG 248 (352)
T ss_pred EEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCC
Confidence 01111 1233 6776666655 999999842 1111110
Q ss_pred ---------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEc-CCceEEE
Q psy11036 164 ---------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISAS-LDHHAKI 214 (239)
Q Consensus 164 ---------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s-~d~~i~i 214 (239)
.+...+.++|..+ .+.+..+.. ...+..++++||++ +|++.. .++.|.+
T Consensus 249 g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t-~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 249 GWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT-GKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred cceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCC-CeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 1124577888766 555555543 45788999999999 887666 5888999
Q ss_pred EEccCCeeeEEec
Q psy11036 215 YEMVNFSPVHTLD 227 (239)
Q Consensus 215 wd~~~~~~~~~~~ 227 (239)
+|..+++.++++.
T Consensus 327 iD~~t~k~i~~i~ 339 (352)
T TIGR02658 327 FDAETGKELSSVN 339 (352)
T ss_pred EECcCCeEEeeec
Confidence 9999999999984
No 239
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=1.2e-11 Score=99.37 Aligned_cols=178 Identities=13% Similarity=0.101 Sum_probs=108.7
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-CC--eEEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-DK--TVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg--~v~vw~~~~~~~~~~~~~~ 84 (239)
..|.++|.+.... +.+..+. ..+.+..|+| +++.|+..+. ++ .|.+||+.+++........
T Consensus 198 ~~l~i~d~dG~~~-~~l~~~~--------------~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~ 261 (448)
T PRK04792 198 YQLMIADYDGYNE-QMLLRSP--------------EPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP 261 (448)
T ss_pred eEEEEEeCCCCCc-eEeecCC--------------CcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC
Confidence 4667777654433 3444444 7788999999 6777665543 33 6888999887654332333
Q ss_pred CCEEEEEEecCCcEEEEeC--CCc--EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CCeEEEEEcccce
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIYEMTLKT 159 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~--i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~~~~ 159 (239)
+......|+|+|+.++... ++. |.++|+. +++ ...+..+.......+|+|||+.|+..+. ++...+|
T Consensus 262 g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~-tg~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy------ 333 (448)
T PRK04792 262 GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIA-TKA-LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIY------ 333 (448)
T ss_pred CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECC-CCC-eEECccCCCCccceEECCCCCEEEEEECCCCCceEE------
Confidence 4455789999999887653 454 7777876 443 4445555556678899999998876654 3333332
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-Cc--eEEEEEccCCee
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMVNFSP 222 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~--~i~iwd~~~~~~ 222 (239)
++|+.+.........+ ......+|+|||++|+..+. ++ .|.++|+.+++.
T Consensus 334 -----------~~dl~~g~~~~Lt~~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~ 386 (448)
T PRK04792 334 -----------RVNLASGKVSRLTFEG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM 386 (448)
T ss_pred -----------EEECCCCCEEEEecCC--CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence 2233222111111222 22345689999998876654 34 466678777754
No 240
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.50 E-value=2e-12 Score=103.40 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=86.5
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe-eCCCeEEEE--eCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG-SYDKTVNVY--DTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~v~vw--~~~~~~~~~~~~~~ 84 (239)
..|++||+.+++... +.... +....++|+| +++.|+.+ +.+|.+.|| |+.+++......+.
T Consensus 228 ~~i~i~dl~tg~~~~-l~~~~--------------g~~~~~~wSP-DG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~ 291 (429)
T PRK01742 228 SQLVVHDLRSGARKV-VASFR--------------GHNGAPAFSP-DGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGA 291 (429)
T ss_pred cEEEEEeCCCCceEE-EecCC--------------CccCceeECC-CCCEEEEEEecCCcEEEEEEECCCCCeEeeccCC
Confidence 479999998876432 22111 2334689999 77776665 467866555 66666544333566
Q ss_pred CCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..+....|+|+|+.++.++ ++...+|+++..+.....+ .+.. ....|+|+|++|+..+.++ +.+||+.
T Consensus 292 ~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~ 361 (429)
T PRK01742 292 GNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLT 361 (429)
T ss_pred CCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECC
Confidence 6788899999999877665 5788888876333333333 3433 4578999999998887765 5558887
No 241
>KOG0974|consensus
Probab=99.50 E-value=1.7e-12 Score=107.37 Aligned_cols=179 Identities=15% Similarity=0.193 Sum_probs=134.0
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-CceeeecCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMSVNHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~~ 85 (239)
+..+.+||...+.....+..... .+. ....-+.+++ +.-++++|+--+.|.+|+.... .+....+|++
T Consensus 108 ~ns~~i~d~~~~~~~~~i~~~er---~~l-------~~~~~~g~s~-~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG 176 (967)
T KOG0974|consen 108 RNSLLIRDSKNSSVLSKIQSDER---CTL-------YSSLIIGDSA-EELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG 176 (967)
T ss_pred CceEEEEecccCceehhcCCCce---EEE-------EeEEEEeccC-cEEEEEeccccccEEEEeccccCCcceecccCC
Confidence 45666677665555554444320 000 1122233444 5568889999999999998633 3444458999
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeee
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT 164 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 164 (239)
.+..+.++.+|+++++.+ |.++++|++..........-+|...+..++|.|+ .+++++.|.+.++|+..
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-------- 246 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-------- 246 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc--------
Confidence 999999999999999999 6999999999444444466789999999999988 89999999999999876
Q ss_pred cceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 165 GGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 165 ~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
...+..+.+|. ..|..++..++...++|++.|+.+++|++..
T Consensus 247 -------------~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 247 -------------GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred -------------cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 33333556665 4688999999999999999999999999854
No 242
>KOG1963|consensus
Probab=99.49 E-value=3.3e-11 Score=98.23 Aligned_cols=216 Identities=14% Similarity=0.212 Sum_probs=148.4
Q ss_pred CCCEEEEeeC-C-C--cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 6 PILIVALWDI-P-S--EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.||.|.+|.- . + ......+.-|. ++|.+++|++ +|.+|++|+..|.+.+|.+.+++....-
T Consensus 225 ~dGrI~vw~d~~~~~~~~t~t~lHWH~--------------~~V~~L~fS~-~G~~LlSGG~E~VLv~Wq~~T~~kqfLP 289 (792)
T KOG1963|consen 225 SDGRILVWRDFGSSDDSETCTLLHWHH--------------DEVNSLSFSS-DGAYLLSGGREGVLVLWQLETGKKQFLP 289 (792)
T ss_pred cCCcEEEEeccccccccccceEEEecc--------------cccceeEEec-CCceEeecccceEEEEEeecCCCccccc
Confidence 5799999953 2 1 22345666777 8999999999 8999999999999999999999833332
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe-----------ccCCceEEEEEcCCCCEEEEEecCCe
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT-----------CHHKTVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~-----------~~~~~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
+..++|..+.++|++.+.+... |+.|.+.... ......++. ...+-.+.++++|.-+.++-.+..|.
T Consensus 290 RLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~-dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~ 368 (792)
T KOG1963|consen 290 RLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS-DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGH 368 (792)
T ss_pred ccCCeeEEEEEcCCCCeEEEEecCceEEEEecc-chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCce
Confidence 6889999999999998887776 8998887663 222221211 12445678889997788888899999
Q ss_pred EEEEEcc-cceEeee-------------------------------------------ecceeEEEEEccCCCE---EE-
Q psy11036 150 AKIYEMT-LKTVSSF-------------------------------------------TGGLDVCIWDMLGGGK---LL- 181 (239)
Q Consensus 150 i~i~d~~-~~~~~~~-------------------------------------------~~~~~i~~~d~~~~~~---~~- 181 (239)
|.+||+. .+.+..+ .|...+++|-.....+ +.
T Consensus 369 vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T 448 (792)
T KOG1963|consen 369 VQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNT 448 (792)
T ss_pred EEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEE
Confidence 9999987 3333333 1123366665433211 11
Q ss_pred EEEecccCcEEEEEEccC--CCeEEEEcCCceEEEEEccCCe----------e--eEEecCCCCeeeeEec
Q psy11036 182 HKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMVNFS----------P--VHTLDYPSPVLSIDVS 238 (239)
Q Consensus 182 ~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~----------~--~~~~~~~~~v~~~~~s 238 (239)
....+|...+...++.+. ....++++.||.++||-+..-+ + +..+ +..++++++|+
T Consensus 449 ~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy-~k~~i~a~~fs 518 (792)
T KOG1963|consen 449 KINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSY-HKTPITALCFS 518 (792)
T ss_pred EEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecc-ccCcccchhhc
Confidence 223467777776666653 2378999999999999883211 1 1121 56677777775
No 243
>KOG3881|consensus
Probab=99.49 E-value=1.5e-12 Score=97.09 Aligned_cols=145 Identities=21% Similarity=0.290 Sum_probs=115.6
Q ss_pred CCCC--CEEEEeeCCCcceeeeeeCCceeeccceeeccCC-CCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCC-Cc
Q psy11036 4 DLPI--LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTP-QDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSP-DP 77 (239)
Q Consensus 4 ~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~-~~ 77 (239)
.|.. ..+.+||++..+++ +.+.. +|+..+... +-.++++.|-+ + ...|++++.-+.|++||.+.+ ++
T Consensus 167 GGke~~n~lkiwdle~~~qi--w~aKN----vpnD~L~LrVPvW~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~~qRRP 239 (412)
T KOG3881|consen 167 GGKENINELKIWDLEQSKQI--WSAKN----VPNDRLGLRVPVWITDIRFLE-GSPNYKFATITRYHQVRLYDTRHQRRP 239 (412)
T ss_pred Cchhcccceeeeecccceee--eeccC----CCCccccceeeeeeccceecC-CCCCceEEEEecceeEEEecCcccCcc
Confidence 4555 78999999877544 44332 111111100 14678899998 6 789999999999999999866 46
Q ss_pred eeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEE-EeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 78 VMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 78 ~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+..+. .+.+++++...|++++++++. .+.+..+|++ .++.... +++..+.|+++..+|.+.++++++-|..++|+|
T Consensus 240 V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r-~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD 318 (412)
T KOG3881|consen 240 VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLR-GGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHD 318 (412)
T ss_pred eeEeccccCcceeeeecCCCcEEEEecccchhheeccc-CceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEee
Confidence 77774 578899999999999999999 5999999999 6665554 888999999999999999999999999999999
Q ss_pred cc
Q psy11036 155 MT 156 (239)
Q Consensus 155 ~~ 156 (239)
++
T Consensus 319 ~k 320 (412)
T KOG3881|consen 319 IK 320 (412)
T ss_pred cc
Confidence 98
No 244
>KOG2321|consensus
Probab=99.46 E-value=2.5e-12 Score=100.41 Aligned_cols=171 Identities=15% Similarity=0.156 Sum_probs=127.5
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe-
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT- 123 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~- 123 (239)
.++++.....+++.| ....|+-++++.|..+.-+. ..+.++++..++...++++|+ +|.|..||.+ ....+.++.
T Consensus 138 Dm~y~~~scDly~~g-sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR-~ksrv~~l~~ 215 (703)
T KOG2321|consen 138 DMKYHKPSCDLYLVG-SGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR-DKSRVGTLDA 215 (703)
T ss_pred cccccCCCccEEEee-cCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch-hhhhheeeec
Confidence 445544234445444 44568888999998888774 458899999999999999999 8999999998 555555443
Q ss_pred -----ccCC-----ceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 124 -----CHHK-----TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 124 -----~~~~-----~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
.|.+ .|+++.|+.+|-.+++|+.+|.+.|||++ .....+..-++...+|..
T Consensus 216 ~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLR-------------------a~~pl~~kdh~~e~pi~~ 276 (703)
T KOG2321|consen 216 ASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLR-------------------ASKPLLVKDHGYELPIKK 276 (703)
T ss_pred ccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcc-------------------cCCceeecccCCccceee
Confidence 2333 49999999999999999999999999998 112222222444568889
Q ss_pred EEEccC--CCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 194 LCLASG--GKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 194 ~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
+.|.+. +..++|. ....++|||-.+|++...+.....++.+|+-|
T Consensus 277 l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p 323 (703)
T KOG2321|consen 277 LDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVP 323 (703)
T ss_pred ecccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeec
Confidence 999875 3445544 45689999999999999999777788888754
No 245
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.44 E-value=5e-09 Score=81.63 Aligned_cols=217 Identities=12% Similarity=0.157 Sum_probs=136.1
Q ss_pred CCCEEEEeeCCCc--c--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCCCC-Ccee
Q psy11036 6 PILIVALWDIPSE--A--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTRSP-DPVM 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~-~~~~ 79 (239)
..|.|..|.+... + .+....... .....++++| ++++|+++. .+|.|.++++... ....
T Consensus 60 ~~g~v~~~~i~~~~g~L~~~~~~~~~g--------------~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~ 124 (345)
T PF10282_consen 60 DSGGVSSYRIDPDTGTLTLLNSVPSGG--------------SSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGE 124 (345)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEEESS--------------SCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEE
T ss_pred CCCCEEEEEECCCcceeEEeeeeccCC--------------CCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCcccce
Confidence 5678888877653 2 233333222 4566899999 677777765 5899999999863 3222
Q ss_pred e---ec-----------CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEE---EEEe-ccCCceEEEEEcCCCC
Q psy11036 80 S---VN-----------HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL---HKFT-CHHKTVTSLCLASGGK 139 (239)
Q Consensus 80 ~---~~-----------~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~---~~~~-~~~~~i~~i~~~~~~~ 139 (239)
. +. ......++.++|+++++++.. ...|.+|++......+ ..+. .....-..++|+|+++
T Consensus 125 ~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~ 204 (345)
T PF10282_consen 125 VVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGK 204 (345)
T ss_dssp EEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSS
T ss_pred eeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcC
Confidence 1 11 234578999999999998886 4789999997433212 2222 2344568999999998
Q ss_pred EEEEEe-cCCeEEEEEcc--cceE---eee-----------------------------ecceeEEEEEccCC-C--EEE
Q psy11036 140 RLISAS-LDHHAKIYEMT--LKTV---SSF-----------------------------TGGLDVCIWDMLGG-G--KLL 181 (239)
Q Consensus 140 ~l~~~~-~d~~i~i~d~~--~~~~---~~~-----------------------------~~~~~i~~~d~~~~-~--~~~ 181 (239)
++.+.. .++.|.++++. ...+ ..+ .+...|.+|++... + +.+
T Consensus 205 ~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~ 284 (345)
T PF10282_consen 205 YAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLV 284 (345)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEE
T ss_pred EEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEE
Confidence 876654 57889999887 2111 111 23445888888332 2 333
Q ss_pred EEEecccCcEEEEEEccCCCeEEEEc-CCceEEEEEc--cCCeeeEEec--CCCCeeeeEe
Q psy11036 182 HKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEM--VNFSPVHTLD--YPSPVLSIDV 237 (239)
Q Consensus 182 ~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~--~~~~~~~~~~--~~~~v~~~~~ 237 (239)
..+.........++++|+|++|+++. .++.|.+|++ ++|.+...-. .-....|+.|
T Consensus 285 ~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 285 QTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 34443344578999999999998776 5778999977 5676654432 3344555554
No 246
>KOG1064|consensus
Probab=99.42 E-value=6.3e-13 Score=115.42 Aligned_cols=178 Identities=20% Similarity=0.307 Sum_probs=139.8
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.+.||.|++|....++.+..++...+ ..|+.+.|+. .|+.+..+..||.+.+|... .++....
T Consensus 2225 tgs~dgsv~~~~w~~~~~v~~~rt~g~-------------s~vtr~~f~~-qGnk~~i~d~dg~l~l~q~~-pk~~~s~q 2289 (2439)
T KOG1064|consen 2225 TGSQDGSVRMFEWGHGQQVVCFRTAGN-------------SRVTRSRFNH-QGNKFGIVDGDGDLSLWQAS-PKPYTSWQ 2289 (2439)
T ss_pred ecCCCceEEEEeccCCCeEEEeeccCc-------------chhhhhhhcc-cCCceeeeccCCceeecccC-Ccceeccc
Confidence 457899999999999998888876542 7899999999 78888888999999999987 4444444
Q ss_pred cCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~ 157 (239)
.|......+.|-. ..+++++ ++.+.+||..........-..|.+.++++++.|..+.|++|+.+|.|++||++
T Consensus 2290 chnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r- 2366 (2439)
T KOG1064|consen 2290 CHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR- 2366 (2439)
T ss_pred cCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehH-
Confidence 5778888888874 6666666 38899999864443333337899999999999999999999999999999998
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
..+..+.++. +. ...++++|+..|.++||++.....+++++
T Consensus 2367 -------------------qrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2367 -------------------QRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred -------------------HHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 2222222222 33 56789999999999999998887777776
No 247
>KOG1310|consensus
Probab=99.42 E-value=1.2e-12 Score=101.73 Aligned_cols=127 Identities=22% Similarity=0.392 Sum_probs=103.0
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEE-eccCCceEEEEEcC--CCCEEEEEecCCeEEEEEccc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEMTL 157 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~i~~~~--~~~~l~~~~~d~~i~i~d~~~ 157 (239)
+|.+.|.|+.|+.+|.+|++|+ |-.+.|||.- ..++++.+ .+|...|.++.|-| +.+.+++|..|..|+++|+..
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~-~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPF-EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecch-hcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 7999999999999999999999 5889999998 66667666 48999999999998 457899999999999999981
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEccC
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~ 219 (239)
..-... | ..-.+....+..|...|..++-.|++ ..+.++++||+|+-+|++.
T Consensus 127 ~~~~~~---------d-~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 127 SKEGGM---------D-HGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred cccccc---------c-cCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 100000 0 00134455567899999999999988 7888999999999999975
No 248
>KOG3914|consensus
Probab=99.40 E-value=7.9e-12 Score=93.62 Aligned_cols=157 Identities=13% Similarity=0.132 Sum_probs=112.1
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCc----eeeecCCCCEEEEEEecCCcEEEEeC-C---CcEEEEEccCCCeE
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDP----VMSVNHGSPVESVLCLPSGGIFVTGG-G---LDVCIWDMLGGGKL 118 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~-~---~~i~~~d~~~~~~~ 118 (239)
.+..++ ++++++.+..+....++++..... .........-+++.+..+.....++. . ..+.+|... . ..
T Consensus 67 ~~~~s~-~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~-~-~~ 143 (390)
T KOG3914|consen 67 LVLTSD-SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSAD-S-GR 143 (390)
T ss_pred ccccCC-CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeeccc-c-cC
Confidence 344556 788999888888877777765443 22223444455666665555444443 2 445555554 2 34
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
...+-+|-..++.++++||+++++++..|..|++-... ...+. .-.-||..-|..++.-
T Consensus 144 ~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ie--------------------sfclGH~eFVS~isl~ 203 (390)
T KOG3914|consen 144 CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIE--------------------SFCLGHKEFVSTISLT 203 (390)
T ss_pred cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchh--------------------hhccccHhheeeeeec
Confidence 44556899999999999999999999999999987766 11111 1235799999999987
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+ ++.|+++|.|++|++||+.+|+.+.++.
T Consensus 204 ~-~~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 204 D-NYLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred c-CceeeecCCCCcEEEEecccCCcccccc
Confidence 5 4569999999999999999999998776
No 249
>KOG1064|consensus
Probab=99.39 E-value=3.4e-12 Score=111.07 Aligned_cols=161 Identities=22% Similarity=0.326 Sum_probs=130.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..|.++.-+| ...+.++|+.||.+++|....++.+..+. ....|+.+.|+.+|..+..+. ||.+.+|... .++.
T Consensus 2209 ~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~--pk~~ 2285 (2439)
T KOG1064|consen 2209 ENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS--PKPY 2285 (2439)
T ss_pred CceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC--Ccce
Confidence 6788888889 67899999999999999999998887773 348899999999998887776 8999999984 7788
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEe---cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISAS---LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
...+.|+.....+.|-. ..+++++ .++.+.+||.-- ......+. ..|.+.++++++
T Consensus 2286 ~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~-----------------~~~~s~v~--~~H~~gaT~l~~ 2344 (2439)
T KOG1064|consen 2286 TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLL-----------------PPMNSLVH--TCHDGGATVLAY 2344 (2439)
T ss_pred eccccCCccccceeeee--hhhhccccCCCCCcccchhccc-----------------Ccccceee--eecCCCceEEEE
Confidence 88889999999999964 5566655 356777777650 01123333 789999999999
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.|..+.|++|+.+|.|++||++..+..+.++
T Consensus 2345 ~P~~qllisggr~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2345 APKHQLLISGGRKGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred cCcceEEEecCCcCcEEEeehHHHHHHHHhh
Confidence 9999999999999999999998877665554
No 250
>KOG4227|consensus
Probab=99.39 E-value=1.8e-11 Score=91.86 Aligned_cols=138 Identities=10% Similarity=0.075 Sum_probs=108.7
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC-----CCeEEEEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG-----GGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~-----~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+|.+.|.++.|+.++++|++|+ |..+++|++.. ..+++..+. .|...|.+++|.-..+.+.+|+.+++|...|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 6899999999999999999999 58899999852 234555544 4568999999999889999999999999999
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEEe--cccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe----eeEEecC
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS----PVHTLDY 228 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~ 228 (239)
+. ..+.+..+. ...+.|..+..+|-.+.|++.+.++.|.+||.+... ++.--..
T Consensus 134 iE--------------------t~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~ 193 (609)
T KOG4227|consen 134 IE--------------------TKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANS 193 (609)
T ss_pred cc--------------------cceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCC
Confidence 98 222222222 234589999999999999999999999999997543 3333346
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
+....++.|+|
T Consensus 194 ~~~F~t~~F~P 204 (609)
T KOG4227|consen 194 GKNFYTAEFHP 204 (609)
T ss_pred CccceeeeecC
Confidence 67777887776
No 251
>KOG4497|consensus
Probab=99.38 E-value=1.6e-12 Score=95.26 Aligned_cols=138 Identities=10% Similarity=0.118 Sum_probs=107.4
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEec
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTC 124 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~ 124 (239)
-+.|+| +++++++.+.- .+.|-|..+-+....+..-..|.-+.|..+..+++.+. ++.|.+|++. ..+-..++..
T Consensus 13 ~c~fSp-~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~-Qpew~ckIde 89 (447)
T KOG4497|consen 13 FCSFSP-CGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLV-QPEWYCKIDE 89 (447)
T ss_pred ceeECC-CCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEee-cceeEEEecc
Confidence 467999 89999998875 78899998887766665566788889998888777766 7899999998 7777788888
Q ss_pred cCCceEEEEEcCCCCEEE-EEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE
Q psy11036 125 HHKTVTSLCLASGGKRLI-SASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203 (239)
Q Consensus 125 ~~~~i~~i~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 203 (239)
...++..++|+|||+.++ +...+-.|.+|.+. .+...-++-....+..++|+|||++.
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~---------------------t~~~~~~~~pK~~~kg~~f~~dg~f~ 148 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLN---------------------TQKGYLLPHPKTNVKGYAFHPDGQFC 148 (447)
T ss_pred CCCcceeeeECCCcceEeeeecceeEEEEEEec---------------------cceeEEecccccCceeEEECCCCcee
Confidence 889999999999996655 56668888888887 12222223334557889999999998
Q ss_pred EEEcC
Q psy11036 204 ISASL 208 (239)
Q Consensus 204 ~s~s~ 208 (239)
+.++.
T Consensus 149 ai~sR 153 (447)
T KOG4497|consen 149 AILSR 153 (447)
T ss_pred eeeec
Confidence 87653
No 252
>KOG0974|consensus
Probab=99.37 E-value=5.7e-11 Score=98.56 Aligned_cols=170 Identities=12% Similarity=0.202 Sum_probs=123.6
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEE-----EEEEecCCcEEEEeC-CCcEEEEEccCCCe
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVE-----SVLCLPSGGIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
.|....+.. ....++.+..+..+.+||...+.....+.+...+. -+-.+++.-++++|. -+.|.+|+......
T Consensus 89 wi~g~~l~~-e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~ 167 (967)
T KOG0974|consen 89 WIFGAKLFE-ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK 167 (967)
T ss_pred cccccchhh-hcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCC
Confidence 343434444 45677778888899999998877766665554432 223455666777777 69999999984444
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
+. .+.+|.+.|..+.++.+|+++++.+.|.++++|+++.. .......-+|...|..++|.
T Consensus 168 p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~-------------------~~~~~~~fgHsaRvw~~~~~ 227 (967)
T KOG0974|consen 168 PI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSR-------------------EVLGCTGFGHSARVWACCFL 227 (967)
T ss_pred cc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccc-------------------cccCcccccccceeEEEEec
Confidence 44 68899999999999999999999999999999999811 11112446899999999999
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec-C-CCCeeeeEe
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD-Y-PSPVLSIDV 237 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~-~~~v~~~~~ 237 (239)
|+ .++|++.|.+.++|+. .++.+..+. | ...+..++.
T Consensus 228 ~n--~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~ 266 (967)
T KOG0974|consen 228 PN--RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAV 266 (967)
T ss_pred cc--eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEE
Confidence 98 8999999999999965 344444444 2 234554443
No 253
>KOG0309|consensus
Probab=99.36 E-value=2.1e-12 Score=103.70 Aligned_cols=177 Identities=20% Similarity=0.327 Sum_probs=135.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeee-cCCCCEEEEEEecC-CcEEEEeCCCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVMSV-NHGSPVESVLCLPS-GGIFVTGGGLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~i~~~d~~~~~~~~ 119 (239)
..|+.+.|+|+....+++++-|-.+..||+++.. ++... .-......++|+-. +..+++...+.|.+||++....++
T Consensus 115 raitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl 194 (1081)
T KOG0309|consen 115 RAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPL 194 (1081)
T ss_pred cceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcce
Confidence 8999999999989999999999999999998865 33333 34556778899874 445555557889999999888999
Q ss_pred EEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEEcc---cceEeee-----------------------eccee----
Q psy11036 120 HKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMT---LKTVSSF-----------------------TGGLD---- 168 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d~~---~~~~~~~-----------------------~~~~~---- 168 (239)
..+++|-..|..+.|+.- ...+.+++.|++|+.||.. .+.-+.. .|+.-
T Consensus 195 ~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~ 274 (1081)
T KOG0309|consen 195 CSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQL 274 (1081)
T ss_pred EEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeec
Confidence 999999999999999763 3568889999999999987 1111111 22222
Q ss_pred -----EEEEEccCCCEEEEEEecccCcEEEEEEccCC----------CeEEEEcCCceEEEEEccC
Q psy11036 169 -----VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG----------KRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 169 -----i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~----------~~l~s~s~d~~i~iwd~~~ 219 (239)
...|+..+..++++.+.+|...|....|-..+ -.|+|-|.|..+++|-+.+
T Consensus 275 ~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 275 RCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred cccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 23455566678999999999988766554321 2599999999999998753
No 254
>KOG0280|consensus
Probab=99.36 E-value=3e-11 Score=87.22 Aligned_cols=163 Identities=20% Similarity=0.186 Sum_probs=111.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-Cceee--ecCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMS--VNHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
-++...+|+..+.+++.+|+.|+.+..||++.. +.+.. ..|...|.+|.-+| .+.++++|+ |..|++||.|+-++
T Consensus 166 ~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~k 245 (339)
T KOG0280|consen 166 FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGK 245 (339)
T ss_pred eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccC
Confidence 888999999878899999999999999999943 33332 14888899999887 577888998 89999999997788
Q ss_pred EEEEEeccCCceEEEEEcCCC--CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 118 LLHKFTCHHKTVTSLCLASGG--KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
++..-. -.+.|..+.++|.- ..|+++ .-+-.+|-+....... + .......+.|.+-...-.
T Consensus 246 Pl~~~~-v~GGVWRi~~~p~~~~~lL~~C-Mh~G~ki~~~~~~~~e-~--------------~~~~~s~~~hdSl~YG~D 308 (339)
T KOG0280|consen 246 PLFKAK-VGGGVWRIKHHPEIFHRLLAAC-MHNGAKILDSSDKVLE-F--------------QIVLPSDKIHDSLCYGGD 308 (339)
T ss_pred ccccCc-cccceEEEEecchhhhHHHHHH-HhcCceEEEecccccc-h--------------heeeeccccccceeeccc
Confidence 776655 34889999999943 334444 3333555555511000 0 112333455666555556
Q ss_pred EccCCCeEEEEc-CCceEE-EEEccCCee
Q psy11036 196 LASGGKRLISAS-LDHHAK-IYEMVNFSP 222 (239)
Q Consensus 196 ~s~~~~~l~s~s-~d~~i~-iwd~~~~~~ 222 (239)
|..-..+|+|++ .|+.++ +|-.-++++
T Consensus 309 Wd~~~~~lATCsFYDk~~~~~Wl~~t~~~ 337 (339)
T KOG0280|consen 309 WDSKDSFLATCSFYDKKIRQLWLHITGEP 337 (339)
T ss_pred cccccceeeeeeccccceeeeeeeccCCc
Confidence 644445688876 477755 776655543
No 255
>KOG1409|consensus
Probab=99.35 E-value=8.6e-11 Score=86.68 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=104.2
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
+|...+.+++|.|....+.++. |..+.+||+-........+.+|...|..+...+--+.+.+++.||.|.+|+++....
T Consensus 195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 5888999999999888888888 799999999855666778889999999998888888999999999999999982222
Q ss_pred ee--e----------------------------------------e--------------cceeEEEEEccC------CC
Q psy11036 161 SS--F----------------------------------------T--------------GGLDVCIWDMLG------GG 178 (239)
Q Consensus 161 ~~--~----------------------------------------~--------------~~~~i~~~d~~~------~~ 178 (239)
.+ + + -+.++++-|.-. +.
T Consensus 275 etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~ 354 (404)
T KOG1409|consen 275 ETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCYPTIKDEER 354 (404)
T ss_pred cCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccccceeEEEEecccchhhhcCCC
Confidence 11 1 0 012244433211 12
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.++.....-...|+.+.+...-.+|+|++.|..|+|||++.
T Consensus 355 t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 355 TPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred CccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence 23444444456799999988888999999999999999864
No 256
>KOG2695|consensus
Probab=99.34 E-value=7.6e-12 Score=92.21 Aligned_cols=152 Identities=17% Similarity=0.244 Sum_probs=118.1
Q ss_pred EEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC----CeEEEEEeccCCceEEEE
Q psy11036 59 ISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG----GKLLHKFTCHHKTVTSLC 133 (239)
Q Consensus 59 ~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~----~~~~~~~~~~~~~i~~i~ 133 (239)
++.+.+..+-+-|++++.. ..+...+.|.++.|...+.++..|. +|.|..+|++.. +.+.+.+. |...|+++.
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq 305 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQ 305 (425)
T ss_pred ecccccceeEEEEeecccc-cccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhh
Confidence 4556667788889888754 3445778899999998888999888 799999999854 34555554 889999998
Q ss_pred EcC-CCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE--EEccCCCeEEEEcCC
Q psy11036 134 LAS-GGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL--CLASGGKRLISASLD 209 (239)
Q Consensus 134 ~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~--~~s~~~~~l~s~s~d 209 (239)
.-. ++.+|.+.+.+|+|++||.+ .++ +.-+..+.+|...-.-+ -..+....+++++.|
T Consensus 306 ~Lq~s~q~LmaS~M~gkikLyD~R~~K~------------------~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdD 367 (425)
T KOG2695|consen 306 ILQFSQQKLMASDMTGKIKLYDLRATKC------------------KKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDD 367 (425)
T ss_pred hhccccceEeeccCcCceeEeeehhhhc------------------ccceeeeecccccccccccccccccceEEEccCe
Confidence 766 78899999999999999999 332 23355667776544333 345667788999999
Q ss_pred ceEEEEEccCCeeeEEecCCC
Q psy11036 210 HHAKIYEMVNFSPVHTLDYPS 230 (239)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~~ 230 (239)
...|||.++.|..+.+++.+.
T Consensus 368 cytRiWsl~~ghLl~tipf~~ 388 (425)
T KOG2695|consen 368 CYTRIWSLDSGHLLCTIPFPY 388 (425)
T ss_pred eEEEEEecccCceeeccCCCC
Confidence 999999999999999998544
No 257
>KOG1334|consensus
Probab=99.34 E-value=5e-12 Score=96.92 Aligned_cols=116 Identities=22% Similarity=0.270 Sum_probs=87.4
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccC
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~ 114 (239)
.+++.|..+.|+. .+..|++|+.|..|.+||...+++...+ +|...|....|-|. .+.+++.+ ||.+++=.+..
T Consensus 140 ~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~ 218 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILE 218 (559)
T ss_pred CCCCccceeeecc-cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeecc
Confidence 3349999999999 8999999999999999999999888877 58888888888883 45566655 89998877664
Q ss_pred CCeE--EEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc
Q psy11036 115 GGKL--LHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT 156 (239)
Q Consensus 115 ~~~~--~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~ 156 (239)
++.. ...+..|.++|..++.-|+. .-|.+++.|+.+.-+|++
T Consensus 219 t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr 263 (559)
T KOG1334|consen 219 TGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR 263 (559)
T ss_pred ccceecceecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence 4433 23445677777777777754 346667777776666664
No 258
>KOG1354|consensus
Probab=99.30 E-value=1.3e-10 Score=85.85 Aligned_cols=182 Identities=13% Similarity=0.241 Sum_probs=126.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-----eeee-------------cCCCCEEEEEEecCCc---EEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-----VMSV-------------NHGSPVESVLCLPSGG---IFVT 101 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-----~~~~-------------~~~~~v~~~~~~~~~~---~l~~ 101 (239)
+-|.++.|.. .|++|++|..+|.|.++.-..... ...+ .....|..+.|.+++. ++++
T Consensus 26 diis~vef~~-~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 26 DIISAVEFDH-YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred cceeeEEeec-ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 6788999999 899999999999999987543221 1111 1346788999998654 5666
Q ss_pred eCCCcEEEEEccCCCeEE----------------------------------EE-EeccCCceEEEEEcCCCCEEEEEec
Q psy11036 102 GGGLDVCIWDMLGGGKLL----------------------------------HK-FTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 102 ~~~~~i~~~d~~~~~~~~----------------------------------~~-~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
+.|.+|++|.+...+... +. -.+|.-.|.+|+++.|+..++++ .
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 669999999876321111 00 02577789999999999888887 6
Q ss_pred CCeEEEEEcc--cceEeee------------------------------ecceeEEEEEccCCCEEEE-----E------
Q psy11036 147 DHHAKIYEMT--LKTVSSF------------------------------TGGLDVCIWDMLGGGKLLH-----K------ 183 (239)
Q Consensus 147 d~~i~i~d~~--~~~~~~~------------------------------~~~~~i~~~d~~~~~~~~~-----~------ 183 (239)
|=.|.+|++. .+..... +..+.|++-|++...-+.. .
T Consensus 184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~ 263 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS 263 (433)
T ss_pred ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence 7889999987 3322222 4567799999884321111 1
Q ss_pred ----EecccCcEEEEEEccCCCeEEEEcCCceEEEEEc-cCCeeeEEec
Q psy11036 184 ----FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-VNFSPVHTLD 227 (239)
Q Consensus 184 ----~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~-~~~~~~~~~~ 227 (239)
+..--..|..+.|+++|+++++-+. -+|++||+ ...+++.+++
T Consensus 264 ~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~ 311 (433)
T KOG1354|consen 264 SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYP 311 (433)
T ss_pred chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEe
Confidence 1112246889999999999997643 58999999 4566776665
No 259
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=3.3e-09 Score=84.31 Aligned_cols=197 Identities=9% Similarity=0.048 Sum_probs=109.3
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC-EEEEeeCC--CeEEEEeCCCCCceeeecC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD-IVISGSYD--KTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~d--g~v~vw~~~~~~~~~~~~~ 83 (239)
...|+++|+.+++...... .. +......|+| +++ ++++.+.+ ..|.++|+.+++.......
T Consensus 212 ~~~Iyv~dl~tg~~~~lt~-~~--------------g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~ 275 (419)
T PRK04043 212 KPTLYKYNLYTGKKEKIAS-SQ--------------GMLVVSDVSK-DGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNY 275 (419)
T ss_pred CCEEEEEECCCCcEEEEec-CC--------------CcEEeeEECC-CCCEEEEEEccCCCcEEEEEECCCCcEEEcccC
Confidence 4578888887776554433 33 5566788999 565 44454444 4677888877764433233
Q ss_pred CCCEEEEEEecCCcEEEEeCC--C--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 84 GSPVESVLCLPSGGIFVTGGG--L--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~--~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
........|+|+|+.++..++ + .|.++|+. .++..+ +...... ...|+|+|+.++.......- .
T Consensus 276 ~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~-~g~~~r-lt~~g~~--~~~~SPDG~~Ia~~~~~~~~-----~--- 343 (419)
T PRK04043 276 PGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLN-SGSVEQ-VVFHGKN--NSSVSTYKNYIVYSSRETNN-----E--- 343 (419)
T ss_pred CCccCccEECCCCCEEEEEECCCCCceEEEEECC-CCCeEe-CccCCCc--CceECCCCCEEEEEEcCCCc-----c---
Confidence 333445689999998877763 3 57777776 444322 2211111 24899999998877654210 0
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC---ceEEEEEccCCeeeEEec-CCCCeeee
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---HHAKIYEMVNFSPVHTLD-YPSPVLSI 235 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~-~~~~v~~~ 235 (239)
...+..+|.+.|+.++.. ..+... .......|+|||+.++-.+.+ ..+.+.++.. .....+. .++.+...
T Consensus 344 --~~~~~~~I~v~d~~~g~~--~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g-~~~~~l~~~~g~~~~p 417 (419)
T PRK04043 344 --FGKNTFNLYLISTNSDYI--RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY-NKSFLFPLKVGKIQSI 417 (419)
T ss_pred --cCCCCcEEEEEECCCCCe--EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC-CeeEEeecCCCccCCC
Confidence 000012234444433221 112211 122357899999987655432 2466777744 3333343 34555555
Q ss_pred Ee
Q psy11036 236 DV 237 (239)
Q Consensus 236 ~~ 237 (239)
+|
T Consensus 418 ~W 419 (419)
T PRK04043 418 DW 419 (419)
T ss_pred CC
Confidence 44
No 260
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.29 E-value=5.3e-09 Score=91.80 Aligned_cols=170 Identities=12% Similarity=0.109 Sum_probs=113.6
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---------------CCCCEEEEEEecCCcEEEEeC--CCcE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---------------HGSPVESVLCLPSGGIFVTGG--GLDV 107 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~~~~--~~~i 107 (239)
...++++|+++.++++.+.++.|++||..++......+ .-.....++++|++..++++. ++.|
T Consensus 685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence 45899999667777888888999999987764321111 012356799999998666555 5899
Q ss_pred EEEEccCCCeEEEEE-------------ec--------cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecc
Q psy11036 108 CIWDMLGGGKLLHKF-------------TC--------HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~-------------~~--------~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 166 (239)
++||+. ++...... .. .-.....++++++|+.+++-..++.|++||..+..+..+.|.
T Consensus 765 rv~D~~-tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~ 843 (1057)
T PLN02919 765 RALDLK-TGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGT 843 (1057)
T ss_pred EEEECC-CCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEecc
Confidence 999987 33221110 00 011236889999999888888999999999984444444332
Q ss_pred eeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 167 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 167 ~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
+..-.-| +.. ..+.-.....++++++|+++++-+.++.|++||+.+++.
T Consensus 844 G~~G~~d----G~~---~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 844 GKAGFKD----GKA---LKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCcCCCC----Ccc---cccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 1100000 110 122234567899999999999989999999999988765
No 261
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.27 E-value=7.9e-09 Score=79.80 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=93.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC-eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK-TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg-~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~~~ 120 (239)
+.|.-..+.. +++-++.|..|| .+-++|.++++.....+.-+.|.++..+|+|++++++.+ .++-++|+. ++....
T Consensus 360 ~~VrY~r~~~-~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vidid-ngnv~~ 437 (668)
T COG4946 360 GGVRYRRIQV-DPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDID-NGNVRL 437 (668)
T ss_pred CceEEEEEcc-CCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEec-CCCeeE
Confidence 6688888877 667888999999 899999998876665577889999999999999999996 889999998 555544
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCC----eEEEEEcccc
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDH----HAKIYEMTLK 158 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~----~i~i~d~~~~ 158 (239)
.-+...+-|+.+.|+|+++++|-+--+| .|+++|+.+.
T Consensus 438 idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 438 IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence 4455667899999999999999876554 6889998743
No 262
>KOG1354|consensus
Probab=99.27 E-value=7.5e-10 Score=81.90 Aligned_cols=213 Identities=12% Similarity=0.183 Sum_probs=143.5
Q ss_pred CCCEEEEeeCCCcc-----eeeeeeCCceeeccceeeccCCCCCeEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCC---
Q psy11036 6 PILIVALWDIPSEA-----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS-SDIVISGSYDKTVNVYDTRSPD--- 76 (239)
Q Consensus 6 ~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~v~vw~~~~~~--- 76 (239)
.+|.|.++.-.... ...+++.|.+-. +...--.-..+|..+.|.++. ...++..+.|.+|++|.+....
T Consensus 45 kgGRVv~f~r~~~~~~ey~~~t~fqshepEF--DYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~ 122 (433)
T KOG1354|consen 45 KGGRVVLFEREKLYKGEYNFQTEFQSHEPEF--DYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKK 122 (433)
T ss_pred CCCeEEEeecccccccceeeeeeeeccCccc--chhhhhhhhhhhhhceecCCCCccEEEEecCCcceeeeeeecccccc
Confidence 56888888643221 233444554110 000000112578899999843 2356667889999999875321
Q ss_pred --------------------------------ceeee--cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE-
Q psy11036 77 --------------------------------PVMSV--NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK- 121 (239)
Q Consensus 77 --------------------------------~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~- 121 (239)
+.+.+ .|...|.++.++.+...++++.|-.|.+|+++...+....
T Consensus 123 ~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIV 202 (433)
T KOG1354|consen 123 EGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIV 202 (433)
T ss_pred ccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEE
Confidence 11111 2667788999999999999999999999999854443332
Q ss_pred -Eecc-----CCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEeee-----------------------------e-
Q psy11036 122 -FTCH-----HKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVSSF-----------------------------T- 164 (239)
Q Consensus 122 -~~~~-----~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~-----------------------------~- 164 (239)
++.+ ..-|++..|+| ..+.++-.+..|+|++.|++...+..- +
T Consensus 203 DIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~ 282 (433)
T KOG1354|consen 203 DIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSH 282 (433)
T ss_pred EccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEcc
Confidence 2333 34689999999 457888899999999999982211110 1
Q ss_pred -c-------ceeEEEEEccCCCEEEEEEecccC------------cE---EEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 165 -G-------GLDVCIWDMLGGGKLLHKFTCHHK------------TV---TSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 165 -~-------~~~i~~~d~~~~~~~~~~~~~h~~------------~v---~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
| -..+.+||+....+++..++.|.. .| ..++|+-++.+++|||....+++|++..|
T Consensus 283 sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 283 SGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred CCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence 1 133899999888888888877643 22 35788888899999999999999996544
No 263
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=1.5e-08 Score=80.59 Aligned_cols=173 Identities=10% Similarity=-0.003 Sum_probs=105.2
Q ss_pred CCeEEEEEecCCCC-EEEEeeC---CCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSD-IVISGSY---DKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~s~~~---dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~ 114 (239)
+......|+| +++ .++..+. +..|.++|+.+++........+......|+|+|+.++... +..|.++|+.
T Consensus 188 ~~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~- 265 (419)
T PRK04043 188 GLNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN- 265 (419)
T ss_pred CCeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC-
Confidence 4567899999 565 3554333 3579999998887655545566677788999998776544 2568888876
Q ss_pred CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 115 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
.++ ...+..+........|+|||+.|+..+..+ +..+|.+.|+.++........+. ...
T Consensus 266 ~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~----------------g~~~Iy~~dl~~g~~~rlt~~g~----~~~ 324 (419)
T PRK04043 266 TKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRL----------------GYPNIFMKKLNSGSVEQVVFHGK----NNS 324 (419)
T ss_pred CCc-EEEcccCCCccCccEECCCCCEEEEEECCC----------------CCceEEEEECCCCCeEeCccCCC----cCc
Confidence 443 444544444344568999999887766431 11223344443322211111121 124
Q ss_pred EEccCCCeEEEEcCC---------ceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 195 CLASGGKRLISASLD---------HHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d---------~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.|+|||++|+..+.. ..|.+.|+.+++. ..+..........|+|
T Consensus 325 ~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~~~~~p~~SP 377 (419)
T PRK04043 325 SVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANGVNQFPRFSS 377 (419)
T ss_pred eECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCCCcCCeEECC
Confidence 899999988766543 3688889887764 3343233334566766
No 264
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.27 E-value=1.3e-07 Score=73.83 Aligned_cols=219 Identities=12% Similarity=0.141 Sum_probs=136.6
Q ss_pred CCCCEEEEeeC--CCccee--eeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC----CCeEEEEeCCCC-
Q psy11036 5 LPILIVALWDI--PSEAQV--STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY----DKTVNVYDTRSP- 75 (239)
Q Consensus 5 ~~dg~i~vwd~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~v~vw~~~~~- 75 (239)
+..+.|++|++ ++++.. ..+... .....++++| ++++|.+... ++.|..|.+...
T Consensus 10 ~~~~gI~~~~~d~~~g~l~~~~~~~~~---------------~~Ps~l~~~~-~~~~LY~~~e~~~~~g~v~~~~i~~~~ 73 (345)
T PF10282_consen 10 GKGGGIYVFRFDEETGTLTLVQTVAEG---------------ENPSWLAVSP-DGRRLYVVNEGSGDSGGVSSYRIDPDT 73 (345)
T ss_dssp SSSTEEEEEEEETTTTEEEEEEEEEES---------------SSECCEEE-T-TSSEEEEEETTSSTTTEEEEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCCceEeeeecCC---------------CCCceEEEEe-CCCEEEEEEccccCCCCEEEEEECCCc
Confidence 45688999988 444432 222222 5567889999 7788777665 579999998764
Q ss_pred Cce---eeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEE--ec-----------cCCceEEEEEcC
Q psy11036 76 DPV---MSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKF--TC-----------HHKTVTSLCLAS 136 (239)
Q Consensus 76 ~~~---~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~--~~-----------~~~~i~~i~~~~ 136 (239)
..+ .... .......++++|++++++++. +|.+.++++...+...... .. ......++.++|
T Consensus 74 g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p 153 (345)
T PF10282_consen 74 GTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP 153 (345)
T ss_dssp TEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T
T ss_pred ceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECC
Confidence 222 2222 456667899999999999997 7999999998555544331 11 123568899999
Q ss_pred CCCEEEEEec-CCeEEEEEcc-cc-eEee---e------------------------ecceeEEEEEcc-CCCE--EEEE
Q psy11036 137 GGKRLISASL-DHHAKIYEMT-LK-TVSS---F------------------------TGGLDVCIWDML-GGGK--LLHK 183 (239)
Q Consensus 137 ~~~~l~~~~~-d~~i~i~d~~-~~-~~~~---~------------------------~~~~~i~~~d~~-~~~~--~~~~ 183 (239)
+++++++... ...|.+|+++ .. .+.. + ..+..|.+++.. ..+. .+..
T Consensus 154 dg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~ 233 (345)
T PF10282_consen 154 DGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQT 233 (345)
T ss_dssp TSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEE
Confidence 9998877653 4589999987 22 1211 1 113336666665 2222 2222
Q ss_pred Eecc------cCcEEEEEEccCCCeEEEEc-CCceEEEEEcc--CC--eeeEEecC-CCCeeeeEecC
Q psy11036 184 FTCH------HKTVTSLCLASGGKRLISAS-LDHHAKIYEMV--NF--SPVHTLDY-PSPVLSIDVSM 239 (239)
Q Consensus 184 ~~~h------~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~--~~--~~~~~~~~-~~~v~~~~~sp 239 (239)
.... ......++++|||++|.++. .+..|.+|++. ++ +.+..+.. ......++++|
T Consensus 234 ~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~ 301 (345)
T PF10282_consen 234 ISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSP 301 (345)
T ss_dssp EESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-T
T ss_pred eeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeC
Confidence 2211 12578899999999987654 57789999993 23 34445553 44578888875
No 265
>KOG4532|consensus
Probab=99.26 E-value=6.3e-09 Score=74.69 Aligned_cols=156 Identities=10% Similarity=0.017 Sum_probs=110.1
Q ss_pred CEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeEEEEE--eccCCceEE
Q psy11036 56 DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKF--TCHHKTVTS 131 (239)
Q Consensus 56 ~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~~~~~--~~~~~~i~~ 131 (239)
--+..++.|.++++.++.-+....... ..-.+..++++++++++++.+| ..|..|.+...++.+... ..-...-.+
T Consensus 129 ~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~ 208 (344)
T KOG4532|consen 129 FPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFY 208 (344)
T ss_pred cceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCcee
Confidence 345567888888888876554333331 1134889999999999999996 889999998666555442 223344567
Q ss_pred EEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC--eEEEEcC
Q psy11036 132 LCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK--RLISASL 208 (239)
Q Consensus 132 i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~ 208 (239)
.+|+.....+|++..||++.|||++ ....... .-..-..|.+++..+.|++.|. +|+-.-.
T Consensus 209 ~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~----------------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEh 272 (344)
T KOG4532|consen 209 NSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE----------------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEH 272 (344)
T ss_pred eeeccCcceEEEEecCCcEEEEEecccccchhh----------------hcccCCCCCCceEEEEecCCCcceEEEEecC
Confidence 8899999999999999999999998 1111100 0111234889999999998653 4555555
Q ss_pred CceEEEEEccCCeeeEEec
Q psy11036 209 DHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~ 227 (239)
-+.+.+-|+++++..+.+.
T Consensus 273 fs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 273 FSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred cceEEEEEcccCceeeEEe
Confidence 6789999999988766654
No 266
>KOG2315|consensus
Probab=99.22 E-value=1.1e-09 Score=85.62 Aligned_cols=114 Identities=25% Similarity=0.425 Sum_probs=88.1
Q ss_pred CCeEEEEEecCCCCEEEE-eeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVIS-GSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s-~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~~~ 117 (239)
++|.++.|+|.+.++.++ |-.-..+.++|++ +.++..++ +++=.++-|+|.|++++.++ .|.+.+||.. ..+
T Consensus 271 GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~-egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~-n~K 347 (566)
T KOG2315|consen 271 GPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP-EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVP-NRK 347 (566)
T ss_pred CCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC-CCCccceEECCCCCEEEEeecCCCCCceEEEecc-chh
Confidence 899999999943344333 4456789999986 56666653 56678899999999999888 3899999998 677
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEec------CCeEEEEEcccceEe
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASL------DHHAKIYEMTLKTVS 161 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~ 161 (239)
.+..+..... +-+.|+|||.+|++++. |+.++||+..+..+.
T Consensus 348 ~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~ 395 (566)
T KOG2315|consen 348 LIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLH 395 (566)
T ss_pred hccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceee
Confidence 7877775443 55899999999999875 678889998755443
No 267
>KOG1409|consensus
Probab=99.22 E-value=1.9e-09 Score=79.71 Aligned_cols=185 Identities=21% Similarity=0.264 Sum_probs=137.1
Q ss_pred eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCceeee--cCCCCEEEEEEecCC
Q psy11036 20 QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR-SPDPVMSV--NHGSPVESVLCLPSG 96 (239)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~--~~~~~v~~~~~~~~~ 96 (239)
.++.+++|. +.++....-| ..+-+++.+.|.++|+|--+ .++.-..+ ..+.+++++.+.++.
T Consensus 16 ll~~~eG~~--------------d~vn~~~l~~-~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~ 80 (404)
T KOG1409|consen 16 LLSKIEGSQ--------------DDVNAAILIP-KEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSES 80 (404)
T ss_pred hhhhhcCch--------------hhhhhheecc-CCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccc
Confidence 455667776 8888888888 78889999999999999644 45544444 357889999999999
Q ss_pred cEEEEeC-CCcEEEEEccCC---CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee--------
Q psy11036 97 GIFVTGG-GLDVCIWDMLGG---GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF-------- 163 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~---~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-------- 163 (239)
..|+++- .|++.-+.+... ....+....|...+..+.|+....++++.+.|..+.--..+ +..+..+
T Consensus 81 ~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~ 160 (404)
T KOG1409|consen 81 RRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASA 160 (404)
T ss_pred eEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCC
Confidence 9999988 588888766432 22344556799999999999888999999999877655444 3333222
Q ss_pred ---------ec----ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 164 ---------TG----GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 164 ---------~~----~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
.| ...+.-.+. +...++..+.+|...+.+++|.|..+.|++|..|..+.+||+.-.
T Consensus 161 ~~~d~~~~fvGd~~gqvt~lr~~~-~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~ 229 (404)
T KOG1409|consen 161 LQFDALYAFVGDHSGQITMLKLEQ-NGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR 229 (404)
T ss_pred CceeeEEEEecccccceEEEEEee-cCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCC
Confidence 11 111111111 235677888999999999999999999999999999999999543
No 268
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=2.5e-07 Score=69.19 Aligned_cols=193 Identities=16% Similarity=0.189 Sum_probs=126.1
Q ss_pred CCeEEEEEecCCCCEEEEeeC-CCeEEEEeCCC-CCc---eeeecCCCC----------EEEEEEecCCcEEEEeC--CC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSY-DKTVNVYDTRS-PDP---VMSVNHGSP----------VESVLCLPSGGIFVTGG--GL 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~-dg~v~vw~~~~-~~~---~~~~~~~~~----------v~~~~~~~~~~~l~~~~--~~ 105 (239)
.+-+-+++++ ++++++++.. .|.|.++-+.. |.. +..+.|.+. +....+.|+++++++.. ..
T Consensus 89 ~~p~yvsvd~-~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D 167 (346)
T COG2706 89 SPPCYVSVDE-DGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD 167 (346)
T ss_pred CCCeEEEECC-CCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc
Confidence 3447899999 7888887765 47899999865 432 223345444 78889999999999988 47
Q ss_pred cEEEEEccCCCeEE----EEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEccc--ceEeee---------------
Q psy11036 106 DVCIWDMLGGGKLL----HKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTL--KTVSSF--------------- 163 (239)
Q Consensus 106 ~i~~~d~~~~~~~~----~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~--~~~~~~--------------- 163 (239)
.|.+|++. .++.. ..++ ....-..|.|+|++++..... -+++|.+|..+. ..+..+
T Consensus 168 ri~~y~~~-dg~L~~~~~~~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~ 245 (346)
T COG2706 168 RIFLYDLD-DGKLTPADPAEVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNW 245 (346)
T ss_pred eEEEEEcc-cCccccccccccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCc
Confidence 79999998 44422 1223 234558899999999877655 489999999882 333222
Q ss_pred -----------------ecceeEEEEEccCCCEEEE---EEecccCcEEEEEEccCCCeEEEEcCC-ceEEEEEc--cCC
Q psy11036 164 -----------------TGGLDVCIWDMLGGGKLLH---KFTCHHKTVTSLCLASGGKRLISASLD-HHAKIYEM--VNF 220 (239)
Q Consensus 164 -----------------~~~~~i~~~d~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~i~iwd~--~~~ 220 (239)
-|...|.++-+......+. ....+....+...|+|.|++|+.+..+ ..|.+|.. ++|
T Consensus 246 ~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG 325 (346)
T COG2706 246 AAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETG 325 (346)
T ss_pred eeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCc
Confidence 1233366665554322222 222344456788999999999888764 46888876 456
Q ss_pred eeeEEec--CCCCeeeeEec
Q psy11036 221 SPVHTLD--YPSPVLSIDVS 238 (239)
Q Consensus 221 ~~~~~~~--~~~~v~~~~~s 238 (239)
++-.... ......++.|.
T Consensus 326 ~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 326 RLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred eEEecccccCCCCcEEEEEc
Confidence 5543332 33445566554
No 269
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.18 E-value=6.9e-09 Score=83.41 Aligned_cols=151 Identities=14% Similarity=0.065 Sum_probs=93.1
Q ss_pred eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--C--CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEE
Q psy11036 66 TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--G--LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141 (239)
Q Consensus 66 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l 141 (239)
.|.++|...+.......+...+....|+|+|+.++..+ + ..|.+||+. +++.. .+....+.+...+|+|||+.|
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~-~g~~~-~l~~~~g~~~~~~~SpDG~~l 257 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLD-TGRRE-QITNFEGLNGAPAWSPDGSKL 257 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECC-CCCEE-EccCCCCCcCCeEECCCCCEE
Confidence 47778887655544446777899999999999887765 2 358889997 44432 333334455678999999988
Q ss_pred EE-EecCC--eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-Cc--eEEEE
Q psy11036 142 IS-ASLDH--HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIY 215 (239)
Q Consensus 142 ~~-~~~d~--~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~--~i~iw 215 (239)
+. ...++ .|.++|+. + ++ ...+..+........|+|||+.|+..+. ++ .|+++
T Consensus 258 a~~~~~~g~~~Iy~~d~~-------------------~-~~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~ 316 (430)
T PRK00178 258 AFVLSKDGNPEIYVMDLA-------------------S-RQ-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKV 316 (430)
T ss_pred EEEEccCCCceEEEEECC-------------------C-CC-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 74 44444 35555555 2 11 1222334444566789999998765553 33 57777
Q ss_pred EccCCeeeEEecCCCCeeeeEecC
Q psy11036 216 EMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 216 d~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
++.+++..............+|+|
T Consensus 317 d~~~g~~~~lt~~~~~~~~~~~Sp 340 (430)
T PRK00178 317 NVNGGRAERVTFVGNYNARPRLSA 340 (430)
T ss_pred ECCCCCEEEeecCCCCccceEECC
Confidence 887776433221222233445554
No 270
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.18 E-value=4.1e-08 Score=75.95 Aligned_cols=153 Identities=12% Similarity=0.072 Sum_probs=114.9
Q ss_pred EecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CC-cEEEEEccCCCeEEEEEeccCC
Q psy11036 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GL-DVCIWDMLGGGKLLHKFTCHHK 127 (239)
Q Consensus 50 ~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-~i~~~d~~~~~~~~~~~~~~~~ 127 (239)
|++.++++++..|. |...+.+...+ ....+++.+.|.-..+.-+++-++.|. || .+-+||.+ +...+.+...-+
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~-~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~--~~e~kr~e~~lg 402 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDG-YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKD--GGEVKRIEKDLG 402 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCC-eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecC--CceEEEeeCCcc
Confidence 45557888888876 67777776544 444557788888888887777777777 65 79999996 445566666788
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc
Q psy11036 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 128 ~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.|.++..+|+|+.++++.....+.+.|++ ++.....-+...+-|+...|||+++++|-+-
T Consensus 403 ~I~av~vs~dGK~~vvaNdr~el~vidid--------------------ngnv~~idkS~~~lItdf~~~~nsr~iAYaf 462 (668)
T COG4946 403 NIEAVKVSPDGKKVVVANDRFELWVIDID--------------------NGNVRLIDKSEYGLITDFDWHPNSRWIAYAF 462 (668)
T ss_pred ceEEEEEcCCCcEEEEEcCceEEEEEEec--------------------CCCeeEecccccceeEEEEEcCCceeEEEec
Confidence 99999999999999999888888888877 1222222233456799999999999999887
Q ss_pred CCc----eEEEEEccCCeeeEEe
Q psy11036 208 LDH----HAKIYEMVNFSPVHTL 226 (239)
Q Consensus 208 ~d~----~i~iwd~~~~~~~~~~ 226 (239)
-+| .|++||+.+++....-
T Consensus 463 P~gy~tq~Iklydm~~~Kiy~vT 485 (668)
T COG4946 463 PEGYYTQSIKLYDMDGGKIYDVT 485 (668)
T ss_pred CcceeeeeEEEEecCCCeEEEec
Confidence 665 6899999888766543
No 271
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.18 E-value=1.9e-10 Score=59.45 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=36.0
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
+++..+.+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788899999999999999999999999999999997
No 272
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.17 E-value=5.7e-08 Score=70.52 Aligned_cols=181 Identities=10% Similarity=0.125 Sum_probs=114.0
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--------CCCCEEEEEEecCC-------cEEEEeCCCcEE
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--------HGSPVESVLCLPSG-------GIFVTGGGLDVC 108 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--------~~~~v~~~~~~~~~-------~~l~~~~~~~i~ 108 (239)
.-+-++|+| ++.+|+.+...|+|+++|+.. ..+..+. ....|..+.|.+.. .+++..-.|.++
T Consensus 45 QWRkl~WSp-D~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~ 122 (282)
T PF15492_consen 45 QWRKLAWSP-DCTLLAYAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLR 122 (282)
T ss_pred hheEEEECC-CCcEEEEEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceee
Confidence 467899999 899999999999999999874 3333331 23456667665422 355555577777
Q ss_pred EEEcc----CCCeEEEEEe---ccCCceEEEEEcCCCCEEEEEecCC-----------eEEEEEcc-cceEeee--ecce
Q psy11036 109 IWDML----GGGKLLHKFT---CHHKTVTSLCLASGGKRLISASLDH-----------HAKIYEMT-LKTVSSF--TGGL 167 (239)
Q Consensus 109 ~~d~~----~~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~-----------~i~i~d~~-~~~~~~~--~~~~ 167 (239)
-|-+. ...+..+.+. .+...|.++.++|..+.|++|+... -+..|.+- +...... ..+.
T Consensus 123 Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~ 202 (282)
T PF15492_consen 123 SYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSED 202 (282)
T ss_pred eEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCc
Confidence 66642 1233334433 2467899999999988888776432 13344432 1111110 1111
Q ss_pred e-------EEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 168 D-------VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 168 ~-------i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+ ..++.+.+ .............|..|..||||+.||+...+|.|.+|++.+.++.++..
T Consensus 203 ~~~~~~~~~~~~~~~~-~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 203 DITASSKRRGLLRIPS-FKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred cccccccccceeeccc-eeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 1 12222211 11111112235679999999999999999999999999999988887776
No 273
>KOG4532|consensus
Probab=99.17 E-value=9.2e-09 Score=73.86 Aligned_cols=164 Identities=10% Similarity=-0.006 Sum_probs=107.8
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEE--ecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCC--c
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLC--LPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK--T 128 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~--~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~ 128 (239)
..+|+.|+..|...+|...+.+....+ .+...|+-+.- ....+.+++..|.++++.++.. + ..... .|.. .
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~-~-s~~~~-~h~~~~~ 160 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSG-D-SNKFA-VHNQNLT 160 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEec-C-cccce-eeccccc
Confidence 457889999999999999876543333 23332322111 1123455555588888887752 2 11111 1322 3
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEE-EEecccCcEEEEEEccCCCeEEEEc
Q psy11036 129 VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLH-KFTCHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 129 i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s 207 (239)
+.+++++++++++++.+....|..|.++.+ ....+. .....+..-.+..|+.....+|++.
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~------------------sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~ 222 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDE------------------SEYIENIYEAPTSDHGFYNSFSENDLQFAVVF 222 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCc------------------cceeeeeEecccCCCceeeeeccCcceEEEEe
Confidence 788999999999999999999999988711 111111 1222334456778999999999999
Q ss_pred CCceEEEEEccCCeee-EEe----c-CCCCeeeeEecC
Q psy11036 208 LDHHAKIYEMVNFSPV-HTL----D-YPSPVLSIDVSM 239 (239)
Q Consensus 208 ~d~~i~iwd~~~~~~~-~~~----~-~~~~v~~~~~sp 239 (239)
.||.+.|||++..... ... + |.+.+..+.|+|
T Consensus 223 Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl 260 (344)
T KOG4532|consen 223 QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSL 260 (344)
T ss_pred cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecC
Confidence 9999999999875432 222 1 778899998885
No 274
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.14 E-value=6.6e-08 Score=71.37 Aligned_cols=200 Identities=16% Similarity=0.109 Sum_probs=121.4
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSP 86 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 86 (239)
+|.|..||..+|+.+........ .....+.... .+..+++++.++.|..||..+++.+..+....+
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~------------~~~~~~~~~~--~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~ 67 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPG------------IGGPVATAVP--DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP 67 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSS------------CSSEEETEEE--ETTEEEEEETTSEEEEEETTTSEEEEEEECSSC
T ss_pred CCEEEEEECCCCCEEEEEECCCC------------CCCccceEEE--eCCEEEEEcCCCEEEEEECCCCCEEEEeecccc
Confidence 68999999999999888765210 0233322332 355666778999999999999998877743333
Q ss_pred EEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEE-eccCC---ceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 87 VESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF-TCHHK---TVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~-~~~~~---~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
+.......++..++...++.+..+|.+ +++.+.+. ..... .........++..++.+..++.+..+|.+ ++.+.
T Consensus 68 ~~~~~~~~~~~v~v~~~~~~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w 146 (238)
T PF13360_consen 68 ISGAPVVDGGRVYVGTSDGSLYALDAK-TGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLW 146 (238)
T ss_dssp GGSGEEEETTEEEEEETTSEEEEEETT-TSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEE
T ss_pred ccceeeecccccccccceeeeEecccC-CcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEE
Confidence 322223335555555567899999987 77777663 32211 11222233347788888889999999987 55543
Q ss_pred eeec-------------------------------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 162 SFTG-------------------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 162 ~~~~-------------------------------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
.... .+.+..+|..+.... .... ...+..+ ...++..|+.++.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~-w~~~--~~~~~~~-~~~~~~~l~~~~~~~ 222 (238)
T PF13360_consen 147 KYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKL-WSKP--ISGIYSL-PSVDGGTLYVTSSDG 222 (238)
T ss_dssp EEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEE-EEEC--SS-ECEC-EECCCTEEEEEETTT
T ss_pred EeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEEECCCCCEE-EEec--CCCccCC-ceeeCCEEEEEeCCC
Confidence 3311 111122244443222 2221 1222221 345677788777999
Q ss_pred eEEEEEccCCeeeEE
Q psy11036 211 HAKIYEMVNFSPVHT 225 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~ 225 (239)
.|..||+++|+.+.+
T Consensus 223 ~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 223 RLYALDLKTGKVVWQ 237 (238)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEeE
Confidence 999999999998754
No 275
>KOG4190|consensus
Probab=99.14 E-value=2.1e-10 Score=90.05 Aligned_cols=166 Identities=16% Similarity=0.220 Sum_probs=115.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-------Cceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-------DPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~ 114 (239)
..|+.++--. +.+-+++++.|++|++|.++.. .+..++ .|+.+|..+.|-.+.++++ ..|+.|++||.-
T Consensus 736 ~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~-ScD~giHlWDPF- 812 (1034)
T KOG4190|consen 736 EKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA-SCDGGIHLWDPF- 812 (1034)
T ss_pred HHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee-eccCcceeeccc-
Confidence 8888887666 7889999999999999998632 244445 5999999999998776664 457889999986
Q ss_pred CCeEEEEEec--cCCceEEEEEcC--CCCEEEEE-ecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 115 GGKLLHKFTC--HHKTVTSLCLAS--GGKRLISA-SLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 115 ~~~~~~~~~~--~~~~i~~i~~~~--~~~~l~~~-~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
.++++..+.. ..+.+..+..-+ +...++++ +...+|+++|.+ .+...++ .+....+..
T Consensus 813 igr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~----------------kVcna~~Pn 876 (1034)
T KOG4190|consen 813 IGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCEL----------------KVCNAPGPN 876 (1034)
T ss_pred ccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeE----------------EeccCCCCc
Confidence 5555543321 122223333323 33444444 778999999988 2221111 011113345
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
..+.+++..+.|++|+.+-..|.|.+.|.++|+.+..+.
T Consensus 877 a~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswr 915 (1034)
T KOG4190|consen 877 ALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWR 915 (1034)
T ss_pred hheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCC
Confidence 668899999999999999999999999999999887543
No 276
>KOG4714|consensus
Probab=99.13 E-value=1.8e-10 Score=82.07 Aligned_cols=143 Identities=14% Similarity=0.167 Sum_probs=97.3
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCE-----EEEEEecCCcEEEEeC------CCcEEEEEccCCCeEEEEE
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPV-----ESVLCLPSGGIFVTGG------GLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~------~~~i~~~d~~~~~~~~~~~ 122 (239)
-++.++++..||.+.+.+.+.- ..+.+..++ .+.+....+..+.+++ -+..+.|+++..+..+...
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~---~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~ 176 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKD---LALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSK 176 (319)
T ss_pred cCCceEecCCCceEEEEechHH---HhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccc
Confidence 4577899999999999998752 222222211 1223333455665554 2556677776222222222
Q ss_pred eccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CC
Q psy11036 123 TCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GG 200 (239)
Q Consensus 123 ~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~ 200 (239)
+. ...|++++-+|.. +.+++|+.||.+.+||.+ +...+...+..|+.++..+-|+| ++
T Consensus 177 ~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~r-------------------n~~~p~S~l~ahk~~i~eV~FHpk~p 236 (319)
T KOG4714|consen 177 KA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDAR-------------------NVAMPVSLLKAHKAEIWEVHFHPKNP 236 (319)
T ss_pred cc-cccchhhhCCcccccEEEEecCCCeEEEEEcc-------------------cccchHHHHHHhhhhhhheeccCCCc
Confidence 22 2348999999954 567788889999999988 22344555688999999999999 67
Q ss_pred CeEEEEcCCceEEEEEccC
Q psy11036 201 KRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~ 219 (239)
..|++++.||.+..||..+
T Consensus 237 ~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 237 EHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred hheeEecCCCcEEEEcCCC
Confidence 8999999999999999763
No 277
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.13 E-value=2.1e-07 Score=71.65 Aligned_cols=173 Identities=12% Similarity=0.057 Sum_probs=117.5
Q ss_pred CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCC-----------CcEEEEEccCCCeEEEEEeccCC------
Q psy11036 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-----------LDVCIWDMLGGGKLLHKFTCHHK------ 127 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------~~i~~~d~~~~~~~~~~~~~~~~------ 127 (239)
++|.+.|..+++.+.++........+ ++|+++.++++.. +.|.+||.. +.+.+.++.....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~-t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ-THLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECc-cCcEEeEEccCCCchhhcc
Confidence 89999999999988888543333445 9999998876643 779999999 8888877764222
Q ss_pred -ceEEEEEcCCCCEEEEEe-c-CCeEEEEEcc-cceEeee-------------------ec-------------------
Q psy11036 128 -TVTSLCLASGGKRLISAS-L-DHHAKIYEMT-LKTVSSF-------------------TG------------------- 165 (239)
Q Consensus 128 -~i~~i~~~~~~~~l~~~~-~-d~~i~i~d~~-~~~~~~~-------------------~~------------------- 165 (239)
....++++|||++|+... . ++.|.+.|+. .+.+.++ ++
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~ 184 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKP 184 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEee
Confidence 234789999999988766 3 6899999998 5544443 00
Q ss_pred -----------------------------ceeEEEEEccCC----CEEEEEEec-------ccCcEEEEEEccCCCeEEE
Q psy11036 166 -----------------------------GLDVCIWDMLGG----GKLLHKFTC-------HHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 166 -----------------------------~~~i~~~d~~~~----~~~~~~~~~-------h~~~v~~~~~s~~~~~l~s 205 (239)
.+.+.+.|+... .+....+.. ..+.+.-++++|+++.++.
T Consensus 185 ~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV 264 (352)
T TIGR02658 185 TEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYL 264 (352)
T ss_pred eeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEE
Confidence 011222221110 000111000 1122334899999988877
Q ss_pred Ec----------CCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 206 AS----------LDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 206 ~s----------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.. ..+.|.++|..+++.+..+.....+..++++|
T Consensus 265 ~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~ 308 (352)
T TIGR02658 265 LADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQ 308 (352)
T ss_pred EecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECC
Confidence 42 22589999999999999999888999999987
No 278
>KOG2041|consensus
Probab=99.12 E-value=1.8e-09 Score=87.20 Aligned_cols=213 Identities=11% Similarity=0.047 Sum_probs=145.6
Q ss_pred CCCCCEEEEeeCCCcc---------------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEE
Q psy11036 4 DLPILIVALWDIPSEA---------------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 68 (239)
.|.||.+++..+.+.. .-+++.+|. +.|..+.|+. +.+.|-+...+|.|.
T Consensus 32 gG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~--------------~sV~vvTWNe-~~QKLTtSDt~GlIi 96 (1189)
T KOG2041|consen 32 GGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHN--------------ASVMVVTWNE-NNQKLTTSDTSGLII 96 (1189)
T ss_pred ccccceeEEEEccccCCcccccccccccccchhhhhccCc--------------ceEEEEEecc-ccccccccCCCceEE
Confidence 4788989888765421 123566676 9999999998 788899999999999
Q ss_pred EEeCCCCCceeee---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE-EEEeccCCceEEEEEcCCCCEEEE
Q psy11036 69 VYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL-HKFTCHHKTVTSLCLASGGKRLIS 143 (239)
Q Consensus 69 vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~~ 143 (239)
+|-+-++.....+ ..++-|.+++|..+|..++..- ||.|.+=.++ ..+.. +.+++ .....+.|++|.+.++.
T Consensus 97 VWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg--~~l~hv~ws~D~~~~Lf 173 (1189)
T KOG2041|consen 97 VWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKG--QLLAHVLWSEDLEQALF 173 (1189)
T ss_pred EEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcch--heccceeecccHHHHHh
Confidence 9999888765544 4677899999999999988777 8888887775 22222 22222 23446889999998888
Q ss_pred EecCCeEEEEEcccc--------eEeeeeccee-----E--EEEEc---------------------------cCCCEEE
Q psy11036 144 ASLDHHAKIYEMTLK--------TVSSFTGGLD-----V--CIWDM---------------------------LGGGKLL 181 (239)
Q Consensus 144 ~~~d~~i~i~d~~~~--------~~~~~~~~~~-----i--~~~d~---------------------------~~~~~~~ 181 (239)
+-..|.+.++|.++. +....+|... | .-|.. .++.+++
T Consensus 174 ~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pv 253 (1189)
T KOG2041|consen 174 KKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPV 253 (1189)
T ss_pred hhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCe
Confidence 889999999998722 2222222111 0 01111 1111122
Q ss_pred EEEecccCcEEEEEEccCCCeEEEEcCCc---------eEEEEEccCCeeeEEec-CCCCeeeeEe
Q psy11036 182 HKFTCHHKTVTSLCLASGGKRLISASLDH---------HAKIYEMVNFSPVHTLD-YPSPVLSIDV 237 (239)
Q Consensus 182 ~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---------~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 237 (239)
..-. ...+..+.|+++|..|+.++.|. .|.+|. .-|+.+.+++ ....|++++|
T Consensus 254 v~dt--gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsW 316 (1189)
T KOG2041|consen 254 VVDT--GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSW 316 (1189)
T ss_pred EEec--ccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEE
Confidence 1111 24578889999999999988643 466664 3578888888 4457888888
No 279
>KOG3914|consensus
Probab=99.12 E-value=4.7e-10 Score=84.31 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=83.2
Q ss_pred EeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC
Q psy11036 60 SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 138 (239)
Q Consensus 60 s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~ 138 (239)
.++....+.+|....+.+...++|-..++.++++||+++++++. |..|++-........-.-.-+|..-|..++.-++
T Consensus 127 kagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~- 205 (390)
T KOG3914|consen 127 KAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN- 205 (390)
T ss_pred ecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-
Confidence 34555667777777677777789999999999999999999999 8999998887343333344579999999999754
Q ss_pred CEEEEEecCCeEEEEEcc-cceEeee
Q psy11036 139 KRLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 139 ~~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
..|++++.|+++++||+. ++.+.++
T Consensus 206 ~~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 206 YLLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred ceeeecCCCCcEEEEecccCCccccc
Confidence 568999999999999999 7777665
No 280
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.11 E-value=8.7e-08 Score=71.61 Aligned_cols=183 Identities=13% Similarity=0.127 Sum_probs=121.3
Q ss_pred CCCCEEEEeeCCCc--cee-eeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CCeEEEEeCCC--CC
Q psy11036 5 LPILIVALWDIPSE--AQV-STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DKTVNVYDTRS--PD 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~--~~ 76 (239)
+....|++|++++. +.. ..+-... +..+-++|+| +++.|.++.. +|.|..|.+.. |+
T Consensus 13 ~~s~gI~v~~ld~~~g~l~~~~~v~~~--------------~nptyl~~~~-~~~~LY~v~~~~~~ggvaay~iD~~~G~ 77 (346)
T COG2706 13 RESQGIYVFNLDTKTGELSLLQLVAEL--------------GNPTYLAVNP-DQRHLYVVNEPGEEGGVAAYRIDPDDGR 77 (346)
T ss_pred cCCCceEEEEEeCcccccchhhhcccc--------------CCCceEEECC-CCCEEEEEEecCCcCcEEEEEEcCCCCe
Confidence 45678999998743 221 1112233 7788999999 7777777654 46777777764 43
Q ss_pred ceee--e-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEE--EEeccCCc----------eEEEEEcCCCC
Q psy11036 77 PVMS--V-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLH--KFTCHHKT----------VTSLCLASGGK 139 (239)
Q Consensus 77 ~~~~--~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~--~~~~~~~~----------i~~i~~~~~~~ 139 (239)
.... . ....+.+.++.++++++++++. .|.|.++.++..+.+.. .+..|.+. +....+.|+++
T Consensus 78 Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~ 157 (346)
T COG2706 78 LTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGR 157 (346)
T ss_pred EEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCC
Confidence 3221 1 1334448899999999999998 59999999975544332 22235444 78889999999
Q ss_pred EEEEEec-CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-CCceEEEEEc
Q psy11036 140 RLISASL-DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEM 217 (239)
Q Consensus 140 ~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~ 217 (239)
+|++... --.|.+|++....+. ......+ .....-+.|.|+|++++....+ -+++|-+|+.
T Consensus 158 ~l~v~DLG~Dri~~y~~~dg~L~----------------~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y 220 (346)
T COG2706 158 YLVVPDLGTDRIFLYDLDDGKLT----------------PADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEY 220 (346)
T ss_pred EEEEeecCCceEEEEEcccCccc----------------ccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEE
Confidence 9988764 245777777611100 0111112 2345678999999999987666 4899999998
Q ss_pred cC
Q psy11036 218 VN 219 (239)
Q Consensus 218 ~~ 219 (239)
..
T Consensus 221 ~~ 222 (346)
T COG2706 221 NP 222 (346)
T ss_pred cC
Confidence 76
No 281
>KOG4190|consensus
Probab=99.10 E-value=6.4e-10 Score=87.35 Aligned_cols=181 Identities=17% Similarity=0.220 Sum_probs=124.1
Q ss_pred CCCCCCCCEEEEeeCCCc-------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q psy11036 1 MSHDLPILIVALWDIPSE-------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 1 fs~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 73 (239)
|...++|++|++|.++.. .+..++..|+ .+|.++.|-. +.+.+++ .||-+.+||.-
T Consensus 750 FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk--------------k~i~~igfL~-~lr~i~S--cD~giHlWDPF 812 (1034)
T KOG4190|consen 750 FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK--------------KPIHDIGFLA-DLRSIAS--CDGGIHLWDPF 812 (1034)
T ss_pred eeeccCCceEEEEEeccccCccccceeeeEhhhcc--------------Ccccceeeee-ccceeee--ccCcceeeccc
Confidence 456688999999998642 2456778888 9999999998 6666664 57899999988
Q ss_pred CCCceeee---cCCCCEEEEEEecC--CcEEEEeC--CCcEEEEEccCCCeEEEEEe-----ccCCceEEEEEcCCCCEE
Q psy11036 74 SPDPVMSV---NHGSPVESVLCLPS--GGIFVTGG--GLDVCIWDMLGGGKLLHKFT-----CHHKTVTSLCLASGGKRL 141 (239)
Q Consensus 74 ~~~~~~~~---~~~~~v~~~~~~~~--~~~l~~~~--~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~i~~~~~~~~l 141 (239)
-+++...+ ...+.+..+..-|+ ...+.++. ..+|+++|.+ ..+....++ +.+..+.+++..+.|+++
T Consensus 813 igr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaR-sce~~~E~kVcna~~Pna~~R~iaVa~~GN~l 891 (1034)
T KOG4190|consen 813 IGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDAR-SCEWTCELKVCNAPGPNALTRAIAVADKGNKL 891 (1034)
T ss_pred ccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecc-cccceeeEEeccCCCCchheeEEEeccCcchh
Confidence 88776654 23445555555554 44555553 5899999998 655554444 344568999999999999
Q ss_pred EEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE-EEccC
Q psy11036 142 ISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI-YEMVN 219 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i-wd~~~ 219 (239)
+++-..|.|.+.|.+ ++.+.++ +.-.-....++ .|..+.|+....|.++.+ |..-.
T Consensus 892 Aa~LSnGci~~LDaR~G~vINsw---------------------rpmecdllqla-apsdq~L~~saldHslaVnWhald 949 (1034)
T KOG4190|consen 892 AAALSNGCIAILDARNGKVINSW---------------------RPMECDLLQLA-APSDQALAQSALDHSLAVNWHALD 949 (1034)
T ss_pred hHHhcCCcEEEEecCCCceeccC---------------------Ccccchhhhhc-CchhHHHHhhcccceeEeeehhcC
Confidence 999999999999998 4433333 22222222222 355566666666777766 65544
Q ss_pred Ce
Q psy11036 220 FS 221 (239)
Q Consensus 220 ~~ 221 (239)
+.
T Consensus 950 gi 951 (1034)
T KOG4190|consen 950 GI 951 (1034)
T ss_pred Ce
Confidence 43
No 282
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.08 E-value=5.3e-08 Score=75.75 Aligned_cols=193 Identities=15% Similarity=0.157 Sum_probs=129.0
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC---------------eEEEEeC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK---------------TVNVYDT 72 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---------------~v~vw~~ 72 (239)
..|.+|.-.....+..+.. ..|..+.|+| ++.+|.+-+..+ .+.+||.
T Consensus 53 ~~V~~~~g~~~~~l~~~~~----------------~~V~~~~fSP-~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~ 115 (561)
T COG5354 53 AGVECWGGPSKAKLVRFRH----------------PDVKYLDFSP-NEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDI 115 (561)
T ss_pred cceEEccccchhheeeeec----------------CCceecccCc-ccceeeeeccCCccChhhccCCccccCceeEEec
Confidence 5688888777665555543 4589999999 899999865443 4999999
Q ss_pred CCCCceeeec-CCCC--EE-EEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEecc-CCceEEEEEcCCCC--EEEE--
Q psy11036 73 RSPDPVMSVN-HGSP--VE-SVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGK--RLIS-- 143 (239)
Q Consensus 73 ~~~~~~~~~~-~~~~--v~-~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~i~~~~~~~--~l~~-- 143 (239)
.++..+..+. ...+ .. -+.|+-+..+++-.....+.++++. ..-....+... ...|...+|+|.++ .|+.
T Consensus 116 ~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t-~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~t 194 (561)
T COG5354 116 ASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEIT-DNIEEHPFKNLRPVGILDFSISPEGNHDELAYWT 194 (561)
T ss_pred cCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecC-CccccCchhhccccceeeEEecCCCCCceEEEEc
Confidence 9999888873 2222 33 5788888888776667789999974 22212222211 35788899999643 3443
Q ss_pred ---EecCCeEEEEEcc-cceEeee---------------------------------ecceeEEEEEccCCCEEEEEEec
Q psy11036 144 ---ASLDHHAKIYEMT-LKTVSSF---------------------------------TGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 144 ---~~~d~~i~i~d~~-~~~~~~~---------------------------------~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
.+.++++++|.+. +..+.+- -|..++++++++...-++. ..
T Consensus 195 PEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~--~~ 272 (561)
T COG5354 195 PEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVE--KD 272 (561)
T ss_pred cccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccccccee--cc
Confidence 4567889999887 3332221 1345577777764222222 24
Q ss_pred ccCcEEEEEEccCCCeEEEEc--CCceEEEEEccCC
Q psy11036 187 HHKTVTSLCLASGGKRLISAS--LDHHAKIYEMVNF 220 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s--~d~~i~iwd~~~~ 220 (239)
-.++|...+|.|.++.+++.+ .+-.+.++|++..
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N 308 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN 308 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeecccccc
Confidence 578999999999888776554 5778888888654
No 283
>KOG4714|consensus
Probab=99.08 E-value=1.6e-09 Score=77.29 Aligned_cols=130 Identities=13% Similarity=0.135 Sum_probs=86.6
Q ss_pred CCEEEEEEecCCcEEE-EeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEe
Q psy11036 85 SPVESVLCLPSGGIFV-TGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~-~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
..|.+++-+|..+.++ +|+ +|.+.+||.++...+...++.|+.++..+-|+| ++..|+++++||.+..||..+..+.
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~ 259 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLS 259 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEE
Confidence 4489999999655554 444 699999999966667777889999999999999 5689999999999999998854443
Q ss_pred eeecceeEEEEEccCCCEE---EEE-EecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 162 SFTGGLDVCIWDMLGGGKL---LHK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~---~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.-.-...+..|--....+. +.. +..-...|.++.. -|..|++|+.-+-|++++
T Consensus 260 i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 260 ISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred ecCccccccccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence 2111111333321111111 111 1112233444443 478899999888898875
No 284
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.07 E-value=1e-09 Score=56.62 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=36.2
Q ss_pred eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+++.++.+|.++|.+++|+|++.+|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 57788999999999999999999999999999999997
No 285
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.07 E-value=3.5e-07 Score=79.33 Aligned_cols=196 Identities=11% Similarity=0.063 Sum_probs=127.3
Q ss_pred CCCCeEEEEEecCCCCEEEEeeCCCeEEEE----eCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC-
Q psy11036 41 PQDYVRAGTVSPVSSDIVISGSYDKTVNVY----DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG- 114 (239)
Q Consensus 41 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~- 114 (239)
..+.|.++.+.+ +...++.+..+|.|.+. +..+......-.....|.+++|+||+..++... ++++.+..-.-
T Consensus 74 ~~~~ivs~~yl~-d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd 152 (928)
T PF04762_consen 74 PNDKIVSFQYLA-DSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFD 152 (928)
T ss_pred CCCcEEEEEecc-CCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccce
Confidence 347899999999 78888888999999999 544443222224678899999999999998887 67777654210
Q ss_pred -------------C--------CeEEEE-------------------------EeccCCceEEEEEcCCCCEEEEEec--
Q psy11036 115 -------------G--------GKLLHK-------------------------FTCHHKTVTSLCLASGGKRLISASL-- 146 (239)
Q Consensus 115 -------------~--------~~~~~~-------------------------~~~~~~~i~~i~~~~~~~~l~~~~~-- 146 (239)
. |++-.. +. ....-..|+|-.||.++|+.+.
T Consensus 153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEc
Confidence 0 000000 11 2234567899999999998875
Q ss_pred -C---CeEEEEEcccceEeee-------------------------ecceeEEEEEccCCCEEEEEEe--cccCcEEEEE
Q psy11036 147 -D---HHAKIYEMTLKTVSSF-------------------------TGGLDVCIWDMLGGGKLLHKFT--CHHKTVTSLC 195 (239)
Q Consensus 147 -d---~~i~i~d~~~~~~~~~-------------------------~~~~~i~~~d~~~~~~~~~~~~--~h~~~v~~~~ 195 (239)
. ..++||+-++....+- .+..+|.+|.-+.-..-...+. .....|..+.
T Consensus 232 ~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~ 311 (928)
T PF04762_consen 232 ETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELA 311 (928)
T ss_pred CCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEE
Confidence 2 5799998774322211 1223466665332211112222 3456799999
Q ss_pred EccCCCeEEEEcCCceEEEEEccCCee--eEEec--CCCCeeeeEecC
Q psy11036 196 LASGGKRLISASLDHHAKIYEMVNFSP--VHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~--~~~~v~~~~~sp 239 (239)
|++|+..||..-.|. |.+|-..+..- -+.+. ....+..+.|+|
T Consensus 312 Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdp 358 (928)
T PF04762_consen 312 WNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDP 358 (928)
T ss_pred ECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECC
Confidence 999999999877665 99999887653 22333 334556688886
No 286
>KOG0309|consensus
Probab=99.06 E-value=2.7e-09 Score=86.38 Aligned_cols=175 Identities=19% Similarity=0.287 Sum_probs=130.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeeecC--CCCEEEEEEecCC---cEEEEeCCCcEEEEEccCC-
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSVNH--GSPVESVLCLPSG---GIFVTGGGLDVCIWDMLGG- 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~--~~~v~~~~~~~~~---~~l~~~~~~~i~~~d~~~~- 115 (239)
+++..+..+| .++-++.++.-| +.+.|+.. ..+.+.+.| .-.|-.+.|+|.. ..+++.+...-.+|++...
T Consensus 25 ~~~~a~si~p-~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss 102 (1081)
T KOG0309|consen 25 GGFNAVSINP-SGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS 102 (1081)
T ss_pred Ccccceeecc-ccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence 5677888999 778788888766 55667654 344444443 3346677887742 3455555666778988643
Q ss_pred -CeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc--cceEeee----------------------ecceeE
Q psy11036 116 -GKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT--LKTVSSF----------------------TGGLDV 169 (239)
Q Consensus 116 -~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~--~~~~~~~----------------------~~~~~i 169 (239)
...-..+.+|...|+.+-|+|+. ..+++++.|-.+..||++ ...+... .-+.++
T Consensus 103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i 182 (1081)
T KOG0309|consen 103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI 182 (1081)
T ss_pred ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence 23344566899999999999965 578999999999999998 3444433 235569
Q ss_pred EEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccC
Q psy11036 170 CIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 170 ~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.+||.+.+..++..+++|...|..+.|.. ....+.+++.||+|+.||...
T Consensus 183 ~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 183 FVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred EEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 99999999999999999999999999876 344678899999999999864
No 287
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.05 E-value=5.8e-07 Score=79.30 Aligned_cols=172 Identities=12% Similarity=0.128 Sum_probs=102.9
Q ss_pred CeEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeee-cC-----------------CCCEEEEEEecC-CcEEEEeC
Q psy11036 44 YVRAGTVSPVSSDI-VISGSYDKTVNVYDTRSPDPVMSV-NH-----------------GSPVESVLCLPS-GGIFVTGG 103 (239)
Q Consensus 44 ~v~~~~~~~~~~~~-l~s~~~dg~v~vw~~~~~~~~~~~-~~-----------------~~~v~~~~~~~~-~~~l~~~~ 103 (239)
....+++.+ +++. +++-..+..|+++|..++. +.++ +. -.....++++|+ +..+++..
T Consensus 625 ~P~GIavd~-~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~ 702 (1057)
T PLN02919 625 RPQGLAYNA-KKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA 702 (1057)
T ss_pred CCcEEEEeC-CCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC
Confidence 357899998 5554 4544556789999987654 3322 10 113467999995 44444444
Q ss_pred -CCcEEEEEccCCCeEEEEEec---------------cCCceEEEEEcCCCCE-EEEEecCCeEEEEEcccceEeeeecc
Q psy11036 104 -GLDVCIWDMLGGGKLLHKFTC---------------HHKTVTSLCLASGGKR-LISASLDHHAKIYEMTLKTVSSFTGG 166 (239)
Q Consensus 104 -~~~i~~~d~~~~~~~~~~~~~---------------~~~~i~~i~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~ 166 (239)
++.|.+||.. .+.. ..+.+ .-.....++++|+++. +++-+.++.|++||++......+.++
T Consensus 703 ~~~~I~v~d~~-~g~v-~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg 780 (1057)
T PLN02919 703 GQHQIWEYNIS-DGVT-RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGG 780 (1057)
T ss_pred CCCeEEEEECC-CCeE-EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEec
Confidence 6889999986 3332 22211 1123467999999884 45556679999999882222222111
Q ss_pred ee------EEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeE
Q psy11036 167 LD------VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 167 ~~------i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~ 224 (239)
.. ..+.+..... . ...-.....++++++|+++++-+.+++|++||..++....
T Consensus 781 ~~~~~~~l~~fG~~dG~g-~----~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t 839 (1057)
T PLN02919 781 DPTFSDNLFKFGDHDGVG-S----EVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT 839 (1057)
T ss_pred ccccCcccccccCCCCch-h----hhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE
Confidence 00 0011100000 0 0011224578999999999999999999999998876654
No 288
>KOG0882|consensus
Probab=99.04 E-value=8e-10 Score=84.44 Aligned_cols=200 Identities=14% Similarity=0.092 Sum_probs=137.7
Q ss_pred CCCCEEEEeeCCC--c-ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceee
Q psy11036 5 LPILIVALWDIPS--E-AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-DKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 5 ~~dg~i~vwd~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~vw~~~~~~~~~~ 80 (239)
+-||.++.|--.. + +.+..+..|. ..|.+++.+- ++.+++|.+. |..++++|+++-..+..
T Consensus 27 SlDGh~KFWkKs~isGvEfVKhFraHL--------------~~I~sl~~S~-dg~L~~Sv~d~Dhs~KvfDvEn~Dminm 91 (558)
T KOG0882|consen 27 SLDGHKKFWKKSRISGVEFVKHFRAHL--------------GVILSLAVSY-DGWLFRSVEDPDHSVKVFDVENFDMINM 91 (558)
T ss_pred ecchhhhhcCCCCccceeehhhhHHHH--------------HHHHhhhccc-cceeEeeccCcccceeEEEeeccchhhh
Confidence 3467777776322 1 2344556666 7888999888 7889999777 99999999988776654
Q ss_pred ec---CCCCEEEEEEecC-C-cEEEEeC--CCcEEEEEccCCC-eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 81 VN---HGSPVESVLCLPS-G-GIFVTGG--GLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 81 ~~---~~~~v~~~~~~~~-~-~~l~~~~--~~~i~~~d~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
+. .++.+..+ .+|. - ..++++. ++.+.++|-.... +....-.-|..+|.++.+++.+..+++....|.|.-
T Consensus 92 iKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEy 170 (558)
T KOG0882|consen 92 IKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEY 170 (558)
T ss_pred cccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEe
Confidence 43 23333322 2222 1 1444444 5999999987555 444555679999999999999999999999999999
Q ss_pred EEccc--ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 153 YEMTL--KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 153 ~d~~~--~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
|...+ +.... -.-|.+... .-+..+.-......++.|+|++..+.+-+.|..|+++++++|+.++.+.
T Consensus 171 Ws~e~~~qfPr~------~l~~~~K~e-TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 171 WSAEGPFQFPRT------NLNFELKHE-TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred ecCCCcccCccc------ccccccccc-chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 98872 11000 011111111 1122222335667899999999999999999999999999999887765
No 289
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.03 E-value=2.4e-06 Score=63.52 Aligned_cols=186 Identities=10% Similarity=0.076 Sum_probs=118.2
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEe-cCCcEEEEeCCCcEEEEEccCCCeEEEEEec-
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL-PSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC- 124 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~- 124 (239)
++.|.+.++.++++-...+.|..|+..+++... +.... ...+++. +++.++++ ..+.+.++|+. .++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~-~~G~~~~~~~g~l~v~-~~~~~~~~d~~-~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG-PNGMAFDRPDGRLYVA-DSGGIAVVDPD-TGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS-EEEEEEECTTSEEEEE-ETTCEEEEETT-TTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC-CceEEEEccCCEEEEE-EcCceEEEecC-CCcEEEEeecc
Confidence 678888567778887788999999998765433 33333 7777887 66555554 44556666887 5543333322
Q ss_pred ----cCCceEEEEEcCCCCEEEEEecC--------CeEEEEEcccceEeee----------------------ecceeEE
Q psy11036 125 ----HHKTVTSLCLASGGKRLISASLD--------HHAKIYEMTLKTVSSF----------------------TGGLDVC 170 (239)
Q Consensus 125 ----~~~~i~~i~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~----------------------~~~~~i~ 170 (239)
.....+.+++.|+|+..++.... |.+..++..++..... +....|.
T Consensus 80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~ 159 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIW 159 (246)
T ss_dssp TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEE
T ss_pred CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceEECCcchheeecccccceeE
Confidence 34568899999999977775543 4566666552211111 2233366
Q ss_pred EEEccCCCE------EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC-CCeeeeEe
Q psy11036 171 IWDMLGGGK------LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP-SPVLSIDV 237 (239)
Q Consensus 171 ~~d~~~~~~------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 237 (239)
.+++..... ....+....+..-.+++..+|++.++....+.|.+++.+ |+.+..+..+ ..+++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~f 232 (246)
T PF08450_consen 160 RFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAF 232 (246)
T ss_dssp EEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEE
T ss_pred EEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEE
Confidence 666653322 122222222347789999999988888889999999987 9999999865 68999988
No 290
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.03 E-value=6.5e-07 Score=70.83 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=62.0
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.+|.|+.+|..+|+.+..++... ........ ++..++.++.++.+..+|..+++.+.......
T Consensus 73 ~~g~v~a~d~~tG~~~W~~~~~~--------------~~~~~p~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~ 135 (377)
T TIGR03300 73 ADGTVVALDAETGKRLWRVDLDE--------------RLSGGVGA---DGGLVFVGTEKGEVIALDAEDGKELWRAKLSS 135 (377)
T ss_pred CCCeEEEEEccCCcEeeeecCCC--------------CcccceEE---cCCEEEEEcCCCEEEEEECCCCcEeeeeccCc
Confidence 45788889988998887766553 21112222 35677788889999999999999877665444
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEE
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLL 119 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~ 119 (239)
.+.+.-...++..++...++.+..+|.+ +++.+
T Consensus 136 ~~~~~p~v~~~~v~v~~~~g~l~a~d~~-tG~~~ 168 (377)
T TIGR03300 136 EVLSPPLVANGLVVVRTNDGRLTALDAA-TGERL 168 (377)
T ss_pred eeecCCEEECCEEEEECCCCeEEEEEcC-CCcee
Confidence 4332222223444444447889999987 44443
No 291
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.03 E-value=8.1e-09 Score=75.73 Aligned_cols=182 Identities=12% Similarity=0.240 Sum_probs=123.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-cee-----------------eecCCCCEEEEEEecCC---cEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVM-----------------SVNHGSPVESVLCLPSG---GIFVT 101 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~-----------------~~~~~~~v~~~~~~~~~---~~l~~ 101 (239)
+.|+++.|.. .|.++++|...|.|.++.-.... +.. .+.....|..+.|..++ .+|++
T Consensus 27 d~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 27 DKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred ceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 6799999998 78999999999999999865332 111 11134567888887643 46777
Q ss_pred eCCCcEEEEEccCC------------------C------------------eEE-----EEE-eccCCceEEEEEcCCCC
Q psy11036 102 GGGLDVCIWDMLGG------------------G------------------KLL-----HKF-TCHHKTVTSLCLASGGK 139 (239)
Q Consensus 102 ~~~~~i~~~d~~~~------------------~------------------~~~-----~~~-~~~~~~i~~i~~~~~~~ 139 (239)
+.|.+|++|.+... + +.+ +.. ..|.-.|.+++|+.|..
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 77999999987521 0 000 001 34667789999998888
Q ss_pred EEEEEecCCeEEEEEcc--cceEeee------------------------------ecceeEEEEEccCCCEEE------
Q psy11036 140 RLISASLDHHAKIYEMT--LKTVSSF------------------------------TGGLDVCIWDMLGGGKLL------ 181 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~--~~~~~~~------------------------------~~~~~i~~~d~~~~~~~~------ 181 (239)
.++++ .|-.|.+|++. ..+.... +..+.|.+-|++...-+.
T Consensus 186 t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 186 TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 77776 57788889876 2222111 456778888887432211
Q ss_pred ---------EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC-CeeeEEec
Q psy11036 182 ---------HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN-FSPVHTLD 227 (239)
Q Consensus 182 ---------~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~ 227 (239)
..+.+-...|..+.|+++|+++++-+. -+|+|||... ..++++++
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~ 319 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIP 319 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeec
Confidence 111223456889999999999997654 5899999965 45677664
No 292
>KOG2695|consensus
Probab=99.02 E-value=1.9e-09 Score=79.87 Aligned_cols=120 Identities=17% Similarity=0.167 Sum_probs=93.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-----CceeeecCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-----DPVMSVNHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~ 115 (239)
+.|.++.|.. .++++..|..+|.|..+|++.+ .+...+-|...|+++..-. ++++|++.+ +|.|++||++..
T Consensus 253 sDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~ 331 (425)
T KOG2695|consen 253 SDVFALQFAG-SDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT 331 (425)
T ss_pred hhHHHHHhcc-cCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhh
Confidence 7799999998 7899999999999999999854 4555667999999998877 677777777 899999999943
Q ss_pred Ce--EEEEEeccCCceEEEE--EcCCCCEEEEEecCCeEEEEEcc-cceEeee
Q psy11036 116 GK--LLHKFTCHHKTVTSLC--LASGGKRLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 116 ~~--~~~~~~~~~~~i~~i~--~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
+. -+.+..+|-..-.-+- ..+....+++++.|...+||.++ +..+.++
T Consensus 332 K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 332 KCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred hcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 22 3677777765433333 35566788999999999999999 4444443
No 293
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.99 E-value=1.7e-07 Score=73.02 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=114.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-----------CCCeEEEEeCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-----------YDKTVNVYDTR 73 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-----------~dg~v~vw~~~ 73 (239)
+..+.+++|.+..+..+.+-.... ..=..+.|++ .+++|+.-- ...++.++++.
T Consensus 199 ~kpa~~~i~sIp~~s~l~tk~lfk--------------~~~~qLkW~~-~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 199 NKPAMVRILSIPKNSVLVTKNLFK--------------VSGVQLKWQV-LGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred CCCcEEEEEEccCCCeeeeeeeEe--------------ecccEEEEec-CCceEEEEEEEeeecccceeccceEEEEeec
Confidence 456777888777665544333222 2233688888 565544311 12468888887
Q ss_pred CCCceeeecCCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC---
Q psy11036 74 SPDPVMSVNHGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD--- 147 (239)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--- 147 (239)
...........++|...+|.|.++.+++.+ .-.+.++|++ +.....+. .+.=..+.|+|.+++++.++.|
T Consensus 264 e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr--~Nl~~~~P--e~~rNT~~fsp~~r~il~agF~nl~ 339 (561)
T COG5354 264 ERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR--GNLRFYFP--EQKRNTIFFSPHERYILFAGFDNLQ 339 (561)
T ss_pred ccccceeccccccceeeeecccCCceeEEecccccceeecccc--cceEEecC--CcccccccccCcccEEEEecCCccc
Confidence 444333335689999999999888776655 5789999997 33443333 4445678899999999998877
Q ss_pred CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC------CceEEEEEccCC
Q psy11036 148 HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL------DHHAKIYEMVNF 220 (239)
Q Consensus 148 ~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~ 220 (239)
|.+.+||.. .....+..+.+.. -+-+.|+||++++.+... |..|+|||+...
T Consensus 340 gni~i~~~~-------------------~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 340 GNIEIFDPA-------------------GRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred cceEEeccC-------------------CceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence 456666654 3233333444422 345679999999876643 788999998543
No 294
>KOG2314|consensus
Probab=98.98 E-value=1.7e-07 Score=73.81 Aligned_cols=193 Identities=13% Similarity=0.093 Sum_probs=124.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCC-----------CeEEEEeCCCCCceeeecC---CCCE-EEEEEecCCcEEEEeCCCcE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD-----------KTVNVYDTRSPDPVMSVNH---GSPV-ESVLCLPSGGIFVTGGGLDV 107 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d-----------g~v~vw~~~~~~~~~~~~~---~~~v-~~~~~~~~~~~l~~~~~~~i 107 (239)
..|.-+.|+| +.++|++-+.. ..++|||+++|...+.+.. +..+ .-..||.+++++|--....|
T Consensus 250 p~Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~si 328 (698)
T KOG2314|consen 250 PGVQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSI 328 (698)
T ss_pred CCceeeecCC-ccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceE
Confidence 3588999999 89999986532 5799999999998887742 2222 34689999999998888899
Q ss_pred EEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEEcc-cceEeee------------------
Q psy11036 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-----HHAKIYEMT-LKTVSSF------------------ 163 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~i~d~~-~~~~~~~------------------ 163 (239)
.||+.. ...++..-.-.-..|....|+|.+..||--... ..+.+-.+. .+.+.+.
T Consensus 329 sIyEtp-sf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdy 407 (698)
T KOG2314|consen 329 SIYETP-SFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDY 407 (698)
T ss_pred EEEecC-ceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcE
Confidence 999986 333333222234578889999998887764421 234444444 3322221
Q ss_pred --------ecc------eeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC---CceEEEEEccC-C---ee
Q psy11036 164 --------TGG------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL---DHHAKIYEMVN-F---SP 222 (239)
Q Consensus 164 --------~~~------~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~i~iwd~~~-~---~~ 222 (239)
+.. .++.++.++...-++..+.- ...|...+|-|.|..+++-+. ..++.+|.+++ . +.
T Consensus 408 LcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~vel-ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~l 486 (698)
T KOG2314|consen 408 LCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVEL-KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSL 486 (698)
T ss_pred EEEEEEeeccccccceEeeEEEEEeeccCCCceeeec-chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhh
Confidence 000 12444555444444444332 556888999999988776543 35789998873 2 22
Q ss_pred eEEecCCCCeeeeEecC
Q psy11036 223 VHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 223 ~~~~~~~~~v~~~~~sp 239 (239)
+..+. ....+.+.|+|
T Consensus 487 Vk~~d-k~~~N~vfwsP 502 (698)
T KOG2314|consen 487 VKELD-KKFANTVFWSP 502 (698)
T ss_pred hhhhc-ccccceEEEcC
Confidence 33333 25677777776
No 295
>KOG1275|consensus
Probab=98.98 E-value=3.3e-08 Score=81.94 Aligned_cols=158 Identities=15% Similarity=0.234 Sum_probs=115.0
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecC-CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEE
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNH-GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTS 131 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 131 (239)
++..++-|+....+..+|+++.+..+.... .+.|+-++. +++.+.+|. .|+|.+-|++ +.+.++++.+|++.|..
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~-s~~~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPN-SFETIHTFDAHSGSISD 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCC-cCceeeeeeccccceee
Confidence 455666677777788899998887776642 224655554 578888888 6999999999 89999999999999987
Q ss_pred EEEcCCCCEEEEEec---------CCeEEEEEcc-cceEeee----------------------ecceeEEEEEccCCC-
Q psy11036 132 LCLASGGKRLISASL---------DHHAKIYEMT-LKTVSSF----------------------TGGLDVCIWDMLGGG- 178 (239)
Q Consensus 132 i~~~~~~~~l~~~~~---------d~~i~i~d~~-~~~~~~~----------------------~~~~~i~~~d~~~~~- 178 (239)
+.. .|+.|+++|. |..|+|||++ .+.+.-+ +..+...+-|..+-.
T Consensus 223 fDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 223 FDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN 300 (1118)
T ss_pred eec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCC
Confidence 766 6889999884 5678999998 4433222 223344455522222
Q ss_pred --EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 179 --KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 179 --~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.-+..+..-...+..+.+|++++.|+.|..+|.|.+|.
T Consensus 301 P~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 301 PPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 22233333445599999999999999999999999997
No 296
>KOG1912|consensus
Probab=98.96 E-value=5.5e-07 Score=73.84 Aligned_cols=198 Identities=10% Similarity=0.099 Sum_probs=143.8
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC-----------CCEEEEeeCCCeEEEEeCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS-----------SDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~l~s~~~dg~v~vw~~~~ 74 (239)
....|.+-|..+.+.++.+..|. ..|+.+.|.|.. .-+|+++.-.|.|.+||...
T Consensus 33 shslV~VVDs~s~q~iqsie~h~--------------s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~ 98 (1062)
T KOG1912|consen 33 SHSLVSVVDSRSLQLIQSIELHQ--------------SAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVL 98 (1062)
T ss_pred cCceEEEEehhhhhhhhccccCc--------------cceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehh
Confidence 44678889999999999999998 999999998731 12567778889999999998
Q ss_pred CCceeee-cCCCCEEEEEEecC---C-cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecC
Q psy11036 75 PDPVMSV-NHGSPVESVLCLPS---G-GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLD 147 (239)
Q Consensus 75 ~~~~~~~-~~~~~v~~~~~~~~---~-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d 147 (239)
+..+..+ .+..++..++|-|. . ..+++-. ...+.+|+.. +++.+-..........|+.+.| |.+++..-+..
T Consensus 99 ~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntd-tG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~ 177 (1062)
T KOG1912|consen 99 ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTD-TGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSK 177 (1062)
T ss_pred hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEcc-CCceeeccccCCcceeeeeeCCCCcceEEEEccC
Confidence 8887777 56788999999772 3 3444444 6899999998 7888877776667788899999 77888888888
Q ss_pred CeEEEEEcc--------cceEeee-----------------------------------------------ecceeEEEE
Q psy11036 148 HHAKIYEMT--------LKTVSSF-----------------------------------------------TGGLDVCIW 172 (239)
Q Consensus 148 ~~i~i~d~~--------~~~~~~~-----------------------------------------------~~~~~i~~~ 172 (239)
|.+.+.+.- ++.++.- +=...+.++
T Consensus 178 g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~ 257 (1062)
T KOG1912|consen 178 GFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVF 257 (1062)
T ss_pred ceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEE
Confidence 888777653 1111111 112336677
Q ss_pred EccCCCEEEEEEecccCcEEEEEEccCC--CeEEEEcCCceEEEEEccC
Q psy11036 173 DMLGGGKLLHKFTCHHKTVTSLCLASGG--KRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 173 d~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~l~s~s~d~~i~iwd~~~ 219 (239)
|++- ..++....-..+.+.-+.+-|++ ..|++.-.||.+.+|-.+.
T Consensus 258 dle~-~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 258 DLEY-ECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred cchh-hceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 7765 34444444445556666777754 5789999999999997654
No 297
>KOG1832|consensus
Probab=98.96 E-value=2.2e-10 Score=94.31 Aligned_cols=173 Identities=18% Similarity=0.239 Sum_probs=129.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--C-CcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--G-LDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~-~~i~~~d~~~~~~~ 118 (239)
...+|++|+- +.+.|+.|+..|.|+++++.+|...... .|..+++.+.-+.+|..+++.+ . --..+|++...+.+
T Consensus 1102 ~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~ 1180 (1516)
T KOG1832|consen 1102 ALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGP 1180 (1516)
T ss_pred cceeeEEeec-CCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCc
Confidence 8899999999 8899999999999999999999887777 6999999999888999888777 2 34679999877777
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee-e---------------cc-----eeEEEEEccC
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF-T---------------GG-----LDVCIWDMLG 176 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-~---------------~~-----~~i~~~d~~~ 176 (239)
.+++.. -.++.|+.....-+.|+......+||++ ...+.++ + -. .+..+||++.
T Consensus 1181 ~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIlndGvLWDvR~ 1256 (1516)
T KOG1832|consen 1181 RHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILNDGVLWDVRI 1256 (1516)
T ss_pred cccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEeeCceeeeecc
Confidence 777653 3568887765555666666788999998 5544442 1 11 1245788876
Q ss_pred CCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 177 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
. +.++.+...+..+ .-.|+|+|..++.-+. |||+++.+.++.++
T Consensus 1257 ~-~aIh~FD~ft~~~-~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP 1300 (1516)
T KOG1832|consen 1257 P-EAIHRFDQFTDYG-GGGFHPSGNEVIINSE-----IWDMRTFKLLHSVP 1300 (1516)
T ss_pred H-HHHhhhhhheecc-cccccCCCceEEeech-----hhhhHHHHHHhcCc
Confidence 4 5555554433222 2369999998887765 89999887776654
No 298
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.95 E-value=1.6e-06 Score=64.48 Aligned_cols=140 Identities=15% Similarity=0.185 Sum_probs=93.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCC--------CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD--------KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d--------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~ 112 (239)
.....+++.| ++++.++.... |.|..++.. ++.......-...+.++|+|+++.|+++. .+.|..+++
T Consensus 86 ~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 86 NRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp EEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEec
Confidence 5688999999 78877775543 557777766 44433344456678999999999887665 588999988
Q ss_pred cCCCe------EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 113 LGGGK------LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 113 ~~~~~------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
...+. .+..+....+..-.+++..+|+..++....+.|.+++.+ ++.+..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~---------------------G~~~~~i~~ 222 (246)
T PF08450_consen 164 DADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD---------------------GKLLREIEL 222 (246)
T ss_dssp ETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT---------------------SCEEEEEE-
T ss_pred cccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC---------------------ccEEEEEcC
Confidence 64333 112222222347889999999988888888999999877 444444454
Q ss_pred ccCcEEEEEEc-cCCCeEEE
Q psy11036 187 HHKTVTSLCLA-SGGKRLIS 205 (239)
Q Consensus 187 h~~~v~~~~~s-~~~~~l~s 205 (239)
....+++++|. ++.+.|+.
T Consensus 223 p~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 223 PVPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp SSSSEEEEEEESTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEE
Confidence 44578999994 56555543
No 299
>KOG1645|consensus
Probab=98.94 E-value=4.3e-08 Score=74.21 Aligned_cols=100 Identities=14% Similarity=0.096 Sum_probs=75.9
Q ss_pred EEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEE
Q psy11036 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVES 89 (239)
Q Consensus 10 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~ 89 (239)
+++.+..+.+..+.+..+. ..|.+++|+|.+..++..++.+..|+|.|+++...+..+.....+.+
T Consensus 175 v~~l~~~~fkssq~lp~~g--------------~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wS 240 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEG--------------SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWS 240 (463)
T ss_pred eEEeccCCcchhhcccccc--------------hhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCcee
Confidence 4445544444444445554 88999999996555899999999999999999988888866699999
Q ss_pred EEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEe
Q psy11036 90 VLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFT 123 (239)
Q Consensus 90 ~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~ 123 (239)
++|.-+....+-++ .|.|.+||++.+..++..+.
T Consensus 241 C~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~ 276 (463)
T KOG1645|consen 241 CCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELV 276 (463)
T ss_pred eeeccCCcceeEEeccCceEEEEEccCCCchHhhhh
Confidence 99998766555555 59999999996555554444
No 300
>KOG2041|consensus
Probab=98.90 E-value=1.1e-08 Score=82.84 Aligned_cols=153 Identities=11% Similarity=0.154 Sum_probs=115.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---------------eeee-cCCCCEEEEEEecCCcEEEEeC-CC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---------------VMSV-NHGSPVESVLCLPSGGIFVTGG-GL 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---------------~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~ 105 (239)
....|++|+. +..+++.|+.||.+++..+.+... -+++ +|.+.|..+.|+.+.+.+.++. +|
T Consensus 15 vkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 15 VKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred ceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 6789999999 889999999999999998765421 1223 5899999999999998888887 79
Q ss_pred cEEEEEccCCCeEEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE
Q psy11036 106 DVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK 183 (239)
Q Consensus 106 ~i~~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 183 (239)
-|.+|-+- .+.-...+. ...+.|.+++|+.+|..++....||.|.+=.+++. ++|.-.
T Consensus 94 lIiVWmly-kgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN-----------RIwgKe-------- 153 (1189)
T KOG2041|consen 94 LIIVWMLY-KGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN-----------RIWGKE-------- 153 (1189)
T ss_pred eEEEEeee-cccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc-----------eecchh--------
Confidence 99999886 443332222 23457899999999999999999999987766622 233211
Q ss_pred EecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 184 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 184 ~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+++ .....+.|++|.+.++.+-..|.+.+||..
T Consensus 154 Lkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnq 186 (1189)
T KOG2041|consen 154 LKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQ 186 (1189)
T ss_pred cch--heccceeecccHHHHHhhhcCCcEEEeccc
Confidence 122 123467899999888888888999999874
No 301
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.87 E-value=1.3e-05 Score=60.81 Aligned_cols=210 Identities=14% Similarity=0.175 Sum_probs=125.5
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe--eCCCeEEEEeCCCCCceeeecCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG--SYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~--~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
-.|.+||..+.++..++.-... +..... ......+++. ++++++.. +--..|.|-|+..++.+..+..++
T Consensus 67 Dvv~~~D~~TL~~~~EI~iP~k----~R~~~~---~~~~~~~ls~-dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG 138 (342)
T PF06433_consen 67 DVVEIWDTQTLSPTGEIEIPPK----PRAQVV---PYKNMFALSA-DGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG 138 (342)
T ss_dssp EEEEEEETTTTEEEEEEEETTS-----B--BS-----GGGEEE-T-TSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS
T ss_pred eEEEEEecCcCcccceEecCCc----chheec---ccccceEEcc-CCcEEEEEccCCCCeEEEEECCCCceeeeecCCC
Confidence 4688999999888776544320 000000 1112346676 66666553 334578888888888877776555
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEec----cCCce-EEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC----HHKTV-TSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i-~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
...-.-. ++..+...++||.+.-..+...++...+... -..++ ..-++...+..++-.+.+|.|+--|+.+...
T Consensus 139 C~~iyP~-~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~ 217 (342)
T PF06433_consen 139 CWLIYPS-GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSA 217 (342)
T ss_dssp EEEEEEE-ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSE
T ss_pred EEEEEec-CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcc
Confidence 3333322 3445667777999999999866666543321 11222 2334444555566677888888877762211
Q ss_pred e---ee------------------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 161 S---SF------------------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 161 ~---~~------------------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
. .+ .++..|.++|+.+ ++.+..+.. ..++.+|.
T Consensus 218 ~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t-~krv~Ri~l-~~~~~Si~ 295 (342)
T PF06433_consen 218 KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKT-HKRVARIPL-EHPIDSIA 295 (342)
T ss_dssp EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTT-TEEEEEEEE-EEEESEEE
T ss_pred cccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCC-CeEEEEEeC-CCccceEE
Confidence 1 11 2345588999887 566665553 34577899
Q ss_pred EccCCC-eEEEE-cCCceEEEEEccCCeeeEEecC
Q psy11036 196 LASGGK-RLISA-SLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 196 ~s~~~~-~l~s~-s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
.+.+.+ +|++. ..++.+.+||..+|+.+.+++.
T Consensus 296 Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 296 VSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 998765 56544 4689999999999999999983
No 302
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.84 E-value=6.1e-07 Score=71.30 Aligned_cols=160 Identities=12% Similarity=0.146 Sum_probs=99.3
Q ss_pred CCeEEEEEecCCCCEEEEe---eCC-CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCc--EEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISG---SYD-KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLD--VCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~---~~d-g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~--i~~~d~~~ 114 (239)
..+..-+|+| ++..++-. ... ..+.++++.+++....+...+.-..-+|+|+|+.++... ++. |.++|+.
T Consensus 193 ~~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~- 270 (425)
T COG0823 193 SLILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD- 270 (425)
T ss_pred cceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCC-
Confidence 6778889999 45443322 122 459999999988777776667777889999999988777 444 6677776
Q ss_pred CCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 115 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
.+. ...+....+.-+.-.|+|||+.++-.+. .|.-. |.++|.........+..+ ..-..
T Consensus 271 ~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~-----------------I~~~~~~g~~~~riT~~~--~~~~~ 330 (425)
T COG0823 271 GKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQ-----------------IYLYDLEGSQVTRLTFSG--GGNSN 330 (425)
T ss_pred CCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcc-----------------eEEECCCCCceeEeeccC--CCCcC
Confidence 333 4445544444457789999998886654 34333 333333332221122222 22226
Q ss_pred EEEccCCCeEEEEcC-Cce--EEEEEccCCeeeE
Q psy11036 194 LCLASGGKRLISASL-DHH--AKIYEMVNFSPVH 224 (239)
Q Consensus 194 ~~~s~~~~~l~s~s~-d~~--i~iwd~~~~~~~~ 224 (239)
-.++|||++|+..+. +|. |.+.|+.++..++
T Consensus 331 p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~ 364 (425)
T COG0823 331 PVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIR 364 (425)
T ss_pred ccCCCCCCEEEEEeccCCceeeEEeccCCCCcEE
Confidence 678999999876664 344 6666665555333
No 303
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.83 E-value=5e-06 Score=62.24 Aligned_cols=196 Identities=13% Similarity=0.216 Sum_probs=119.9
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeE--EEEEecCCCCEEEEeeC-----CCeEEEEeCC-CCCceee
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVR--AGTVSPVSSDIVISGSY-----DKTVNVYDTR-SPDPVMS 80 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~-----dg~v~vw~~~-~~~~~~~ 80 (239)
...+||..+++....+.... +.-. --.|++ ++++|++.-. .|.|-|||.. +.+.+..
T Consensus 29 ~~~v~D~~~g~~~~~~~a~~--------------gRHFyGHg~fs~-dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E 93 (305)
T PF07433_consen 29 FALVFDCRTGQLLQRLWAPP--------------GRHFYGHGVFSP-DGRLLYTTENDYETGRGVIGVYDAARGYRRIGE 93 (305)
T ss_pred EEEEEEcCCCceeeEEcCCC--------------CCEEecCEEEcC-CCCEEEEeccccCCCcEEEEEEECcCCcEEEeE
Confidence 56788999998887776543 2221 357899 7888887533 4789999998 4455556
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeCC--------Cc-----------EEEEEccCCCeEEEE--E--eccCCceEEEEEcC
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGGG--------LD-----------VCIWDMLGGGKLLHK--F--TCHHKTVTSLCLAS 136 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~~--------~~-----------i~~~d~~~~~~~~~~--~--~~~~~~i~~i~~~~ 136 (239)
+ .+.-....+.+.|+|+.|+++.. |. +.+.|.. +++.+.+ + ..|...|..+++.+
T Consensus 94 ~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~-sG~ll~q~~Lp~~~~~lSiRHLa~~~ 172 (305)
T PF07433_consen 94 FPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR-SGALLEQVELPPDLHQLSIRHLAVDG 172 (305)
T ss_pred ecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC-CCceeeeeecCccccccceeeEEecC
Confidence 6 35555677889999988887741 22 3334444 5666655 3 23667888899988
Q ss_pred CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-CCceEEEE
Q psy11036 137 GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIY 215 (239)
Q Consensus 137 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iw 215 (239)
+|..++..-..|.-. +. ...+.....+..+...+... . ....-.+.+-++++++++.+++..| .-+.+.+|
T Consensus 173 ~G~V~~a~Q~qg~~~--~~-~PLva~~~~g~~~~~~~~p~--~---~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~ 244 (305)
T PF07433_consen 173 DGTVAFAMQYQGDPG--DA-PPLVALHRRGGALRLLPAPE--E---QWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW 244 (305)
T ss_pred CCcEEEEEecCCCCC--cc-CCeEEEEcCCCcceeccCCh--H---HHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence 877655544333210 00 00111111111111111100 0 0112345688999999998876555 57899999
Q ss_pred EccCCeeeEEecC
Q psy11036 216 EMVNFSPVHTLDY 228 (239)
Q Consensus 216 d~~~~~~~~~~~~ 228 (239)
|..+++.+.....
T Consensus 245 d~~tg~~~~~~~l 257 (305)
T PF07433_consen 245 DAATGRLLGSVPL 257 (305)
T ss_pred ECCCCCEeecccc
Confidence 9999998877653
No 304
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.82 E-value=5.5e-06 Score=64.12 Aligned_cols=192 Identities=14% Similarity=0.139 Sum_probs=117.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC------CCEEEEeeC----------CCeEEEEe
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS------SDIVISGSY----------DKTVNVYD 71 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~l~s~~~----------dg~v~vw~ 71 (239)
..|++.|..+.+.+.++.-... ..+.+++..... .++++.|+. .|.+.+++
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~-------------E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~ 68 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPN-------------EHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFE 68 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETT-------------EEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCC-------------ceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEE
Confidence 4689999988887776654331 445555443311 467776643 28999999
Q ss_pred CCCC----Ccee---eecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe-ccCCceEEEEEcCCCCEEEE
Q psy11036 72 TRSP----DPVM---SVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLIS 143 (239)
Q Consensus 72 ~~~~----~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~ 143 (239)
+... ..+. ....+++|++++-. ++ .++++.++.|.+|++....+....-. .....+.++... +++++.
T Consensus 69 i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~v 144 (321)
T PF03178_consen 69 ISESPENNFKLKLIHSTEVKGPVTAICSF-NG-RLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILV 144 (321)
T ss_dssp ECSS-----EEEEEEEEEESS-EEEEEEE-TT-EEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEE
T ss_pred EEcccccceEEEEEEEEeecCcceEhhhh-CC-EEEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEE
Confidence 9874 1222 22468899999877 34 47777789999999984441332222 122355555554 669999
Q ss_pred EecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE--ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC--
Q psy11036 144 ASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF--TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN-- 219 (239)
Q Consensus 144 ~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~-- 219 (239)
|..-..+.++..+. ....+..+ ......++++.|-++++.++.+..+|.+.++....
T Consensus 145 gD~~~sv~~~~~~~-------------------~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~ 205 (321)
T PF03178_consen 145 GDAMKSVSLLRYDE-------------------ENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEI 205 (321)
T ss_dssp EESSSSEEEEEEET-------------------TTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-
T ss_pred EEcccCEEEEEEEc-------------------cCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCC
Confidence 98888888775540 11111111 22345688888886667899999999999998752
Q ss_pred -----Ce----eeEEecCCCCeeee
Q psy11036 220 -----FS----PVHTLDYPSPVLSI 235 (239)
Q Consensus 220 -----~~----~~~~~~~~~~v~~~ 235 (239)
+. ....+..+..|+++
T Consensus 206 ~~~~~~~~~L~~~~~f~lg~~v~~~ 230 (321)
T PF03178_consen 206 PNSRDGDPKLERISSFHLGDIVNSF 230 (321)
T ss_dssp SSTTTTTTBEEEEEEEE-SS-EEEE
T ss_pred cccccccccceeEEEEECCCccceE
Confidence 22 33445566777776
No 305
>KOG2066|consensus
Probab=98.81 E-value=3.2e-07 Score=75.24 Aligned_cols=144 Identities=17% Similarity=0.145 Sum_probs=98.1
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecC-----CcEEEEeCC-CcEEEEEccCC-CeEEEEEeccC
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPS-----GGIFVTGGG-LDVCIWDMLGG-GKLLHKFTCHH 126 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~-~~i~~~d~~~~-~~~~~~~~~~~ 126 (239)
+|.++++|+.||+|.|-.+-+.+...++....++.+++++|+ .+.+++|+. | +.++.-+-- .+....+....
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e 160 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE 160 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc
Confidence 589999999999999999999998888888999999999997 567888885 6 766643211 11222456678
Q ss_pred CceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEE
Q psy11036 127 KTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 127 ~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 205 (239)
++|.++.| .|+++|-++.+| |++||+. .+.+..+. .+.... ....--..+.|.++.++++
T Consensus 161 G~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~--------------~p~~~~-R~e~fpphl~W~~~~~LVI- 221 (846)
T KOG2066|consen 161 GPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIP--------------PPSQSV-RPELFPPHLHWQDEDRLVI- 221 (846)
T ss_pred cceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccC--------------CCCCCC-CcccCCCceEecCCCeEEE-
Confidence 89999999 577888887666 8889887 33333330 000000 1112234677877655443
Q ss_pred EcCCceEEEEEcc
Q psy11036 206 ASLDHHAKIYEMV 218 (239)
Q Consensus 206 ~s~d~~i~iwd~~ 218 (239)
|= .-+|+|..++
T Consensus 222 GW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 222 GW-GDSVKICSIK 233 (846)
T ss_pred ec-CCeEEEEEEe
Confidence 43 3367787776
No 306
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.79 E-value=1.7e-06 Score=68.93 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=78.5
Q ss_pred CCCCEEEEEEec-CCcEEEEeC-----CCc----EEEEEccCCCeEE--E-EEeccCCceEEEEEcCCCCEEEEEecCCe
Q psy11036 83 HGSPVESVLCLP-SGGIFVTGG-----GLD----VCIWDMLGGGKLL--H-KFTCHHKTVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 83 ~~~~v~~~~~~~-~~~~l~~~~-----~~~----i~~~d~~~~~~~~--~-~~~~~~~~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
.+....++.|+. +...+.+.. +|. .++|+.. ..+.. . +--.....+.+++++|+...++.|+.||.
T Consensus 204 TE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~-r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgS 282 (545)
T PF11768_consen 204 TENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECS-RNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGS 282 (545)
T ss_pred ecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEee-cCceeEEEEEEEecCCcceEEecCcccceEEEEecCCe
Confidence 344556777776 334444432 233 4567765 22211 1 11246778999999999999999999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
|.+||... . +..+..+.-..+.++|+|+|.++++|+.-|.+.+||+.-
T Consensus 283 iiLyD~~~---------------------~-~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 283 IILYDTTR---------------------G-VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEEEEcCC---------------------C-eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 99999871 1 111122344578899999999999999999999999863
No 307
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.73 E-value=2.6e-06 Score=67.80 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=77.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCe--EEEEeCCCCCceeee-cCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKT--VNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--v~vw~~~~~~~~~~~-~~~ 84 (239)
..++++|+++++....+... +.-...+|+|++..++++...||. |.+.|+.+++..+ + ...
T Consensus 218 ~~i~~~~l~~g~~~~i~~~~---------------g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~ 281 (425)
T COG0823 218 PRIYYLDLNTGKRPVILNFN---------------GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGF 281 (425)
T ss_pred ceEEEEeccCCccceeeccC---------------CccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCC
Confidence 46888888887665544422 334477899955556667777775 5555666665333 4 223
Q ss_pred CCEEEEEEecCCcEEEEeCC--Cc--EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 85 SPVESVLCLPSGGIFVTGGG--LD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~~--~~--i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
+.-..=.|+|+|+.++..+| |. |.+++.+ +.....+......-..-.|+|||++|+..+.
T Consensus 282 gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~--g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 282 GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLE--GSQVTRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred ccccCccCCCCCCEEEEEeCCCCCcceEEECCC--CCceeEeeccCCCCcCccCCCCCCEEEEEec
Confidence 33346679999999998884 54 5566665 3333444433333337789999999888774
No 308
>KOG2066|consensus
Probab=98.73 E-value=3.5e-07 Score=75.04 Aligned_cols=150 Identities=14% Similarity=0.217 Sum_probs=111.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~ 121 (239)
+.+.|++++ ++.++-|+.+|.|++.+... .+...+.|... ..+|.++++++ ||.|.+-.+- +.+...+
T Consensus 40 D~is~~av~---~~~~~~GtH~g~v~~~~~~~-~~~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~-~~~~~~~ 108 (846)
T KOG2066|consen 40 DAISCCAVH---DKFFALGTHRGAVYLTTCQG-NPKTNFDHSSS------ILEGEYVASCSDDGKVVIGSLF-TDDEITQ 108 (846)
T ss_pred hHHHHHHhh---cceeeeccccceEEEEecCC-ccccccccccc------ccCCceEEEecCCCcEEEeecc-CCcccee
Confidence 567777774 57999999999999999753 33333444443 66899999999 7999998887 5555555
Q ss_pred EeccCCceEEEEEcCC-----CCEEEEEecCCeEEEEEcc--cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 122 FTCHHKTVTSLCLASG-----GKRLISASLDHHAKIYEMT--LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~-----~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
+. ...++.+++++|+ .+.+++|+..| +.++.-+ +. ...+ .+..-.++|.++
T Consensus 109 ~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgn-------------------k~~v-~l~~~eG~I~~i 166 (846)
T KOG2066|consen 109 YD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGN-------------------KDSV-VLSEGEGPIHSI 166 (846)
T ss_pred Ee-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcC-------------------ccce-eeecCccceEEE
Confidence 54 4578999999997 57899999988 7776544 11 1111 344557899999
Q ss_pred EEccCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
.|. |.++|=++.+| |++||..+++.+..++.
T Consensus 167 ~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 167 KWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPP 197 (846)
T ss_pred Eec--CcEEEEecCCC-cEEEeccccceeeccCC
Confidence 996 78888887776 89999999998888773
No 309
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.70 E-value=1.7e-05 Score=58.38 Aligned_cols=175 Identities=15% Similarity=0.145 Sum_probs=105.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK-- 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~-- 117 (239)
..+..++|+|+++.++++....+.|..++. +++.++.+. .-+....+++..++.++++.. ++.+.++++....+
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~ 100 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSL 100 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT-
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecccccc
Confidence 679999999966678888888899988886 477777763 346788999988887777665 68898888842221
Q ss_pred ---EEEEEe-----ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC
Q psy11036 118 ---LLHKFT-----CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189 (239)
Q Consensus 118 ---~~~~~~-----~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~ 189 (239)
....+. .++..+-.++|+|.++.|+.+-+.....+|.++... +...+.+.+... .........
T Consensus 101 ~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~ 171 (248)
T PF06977_consen 101 DRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFP-----GGFDLFVSDDQD----LDDDKLFVR 171 (248)
T ss_dssp -EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT------SS--EEEE-HH----HH-HT--SS
T ss_pred chhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcccc-----Cccceeeccccc----cccccceec
Confidence 112221 245578999999988888888787777777776210 111121111100 000111234
Q ss_pred cEEEEEEccC-CCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 190 TVTSLCLASG-GKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 190 ~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
.+.+++++|. +.+++-+..+..|.++| .+|+++..+..
T Consensus 172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L 210 (248)
T PF06977_consen 172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSL 210 (248)
T ss_dssp ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-
T ss_pred cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEe
Confidence 5788999994 66777788889999999 68888877763
No 310
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.70 E-value=6.1e-06 Score=67.41 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=70.0
Q ss_pred CCeEEEEeCCC-----CCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe-----------EEEEEecc
Q psy11036 64 DKTVNVYDTRS-----PDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK-----------LLHKFTCH 125 (239)
Q Consensus 64 dg~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~-----------~~~~~~~~ 125 (239)
++.|.+.|.++ .+....+........+.++|+|+++++++ +.++.++|+....+ ...+..-.
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 35688888887 34555567778888999999999999998 79999999973221 23344433
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.++ ...+|.++|+...+...|..|..||+.
T Consensus 375 lGP-LHTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 375 LGP-LHTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred CCc-ceEEECCCCCEEEeEeecceeEEEehH
Confidence 344 457899999888888899999999987
No 311
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.69 E-value=9.7e-07 Score=70.33 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=81.8
Q ss_pred CCeEEEEEecCCCCEEEEe----eCCCe----EEEEeCCCCCce----eeecCCCCEEEEEEecCCcEEEEeC-CCcEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISG----SYDKT----VNVYDTRSPDPV----MSVNHGSPVESVLCLPSGGIFVTGG-GLDVCI 109 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~----~~dg~----v~vw~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~ 109 (239)
....++.|+..+++.+.+- +.+|. -.+|+....+.. ..++.+..+.+++++|+...++.|. ||.|.+
T Consensus 206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiL 285 (545)
T PF11768_consen 206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIIL 285 (545)
T ss_pred CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEE
Confidence 4456888887555665543 33443 346776555432 2336889999999999999999998 999999
Q ss_pred EEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 110 ~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
||.. .+ +.......-..+.++|+|+|..+++|+..|.+.+||+.
T Consensus 286 yD~~-~~--~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 286 YDTT-RG--VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred EEcC-CC--eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 9986 32 22222344567899999999999999999999999998
No 312
>KOG2314|consensus
Probab=98.68 E-value=5.6e-07 Score=71.05 Aligned_cols=160 Identities=17% Similarity=0.187 Sum_probs=102.8
Q ss_pred EEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe
Q psy11036 67 VNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 67 v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~ 145 (239)
...|+.....+...- ...-.-+-+.|||.|.+|++-....|.+|--. ....++.+. |. .|.-+.|||..++|++-+
T Consensus 192 svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~GI~lWGG~-~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s 268 (698)
T KOG2314|consen 192 SVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQGIALWGGE-SFDRIQRFY-HP-GVQFIDFSPNEKYLVTYS 268 (698)
T ss_pred EEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccceeeecCc-cHHHHHhcc-CC-CceeeecCCccceEEEec
Confidence 456765544332211 12233467899999999999998789999765 445555554 54 478899999999999977
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec--ccCc-EEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKT-VTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~~~-v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
..-.+.-|+-. .+..+++||+.+ +.....+.. .... -.-..||.|++++|.-.. ..|.||+..+..+
T Consensus 269 ~~p~~~~~~d~--------e~~~l~IWDI~t-G~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~l 338 (698)
T KOG2314|consen 269 PEPIIVEEDDN--------EGQQLIIWDIAT-GLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFML 338 (698)
T ss_pred CCccccCcccC--------CCceEEEEEccc-cchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceee
Confidence 54433222211 122366666665 454444443 1222 234689999999997766 5799999877655
Q ss_pred eEEec-CCCCeeeeEecC
Q psy11036 223 VHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 223 ~~~~~-~~~~v~~~~~sp 239 (239)
+..-. -.+.|...+|||
T Consensus 339 ld~Kslki~gIr~FswsP 356 (698)
T KOG2314|consen 339 LDKKSLKISGIRDFSWSP 356 (698)
T ss_pred ecccccCCccccCcccCC
Confidence 54333 346788888887
No 313
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.67 E-value=2e-05 Score=62.44 Aligned_cols=152 Identities=14% Similarity=0.104 Sum_probs=88.3
Q ss_pred CEEEEeeCCCeEEEEeCCCCCceeeecCCC-----C---EEEEEEec--CCcEEEEeC-CCcEEEEEccCCCeEEEEEec
Q psy11036 56 DIVISGSYDKTVNVYDTRSPDPVMSVNHGS-----P---VESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC 124 (239)
Q Consensus 56 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-----~---v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~ 124 (239)
..++.+..++.+..+|.++++.+....... . ...+.-+| .+..+++++ ++.+..+|.. +++.+.....
T Consensus 191 ~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~-tG~~~W~~~~ 269 (377)
T TIGR03300 191 GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLR-SGRVLWKRDA 269 (377)
T ss_pred CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECC-CCcEEEeecc
Confidence 356777888999999999998665432110 0 00111111 233444444 8999999998 6665554441
Q ss_pred cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee---------------------ecceeEEEEEccCCCEEEE
Q psy11036 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF---------------------TGGLDVCIWDMLGGGKLLH 182 (239)
Q Consensus 125 ~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~---------------------~~~~~i~~~d~~~~~~~~~ 182 (239)
.. ..... ..+..++.++.+|.+..+|.. ++.+... ..++.+.++|..+ ++.+.
T Consensus 270 -~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~t-G~~~~ 344 (377)
T TIGR03300 270 -SS-YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSRED-GSFVA 344 (377)
T ss_pred -CC-ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCC-CCEEE
Confidence 11 11222 245677788889999999886 4433222 2234477777665 56666
Q ss_pred EEecccCcEEE-EEEccCCCeEEEEcCCceEEEE
Q psy11036 183 KFTCHHKTVTS-LCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 183 ~~~~h~~~v~~-~~~s~~~~~l~s~s~d~~i~iw 215 (239)
.+..+...+.. ..+. + +.|+.++.||.|+.|
T Consensus 345 ~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 345 RLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF 376 (377)
T ss_pred EEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence 66654443322 2222 3 347778889988765
No 314
>KOG1275|consensus
Probab=98.67 E-value=2.2e-07 Score=77.24 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=101.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---------CeEEEEeCCCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---------KTVNVYDTRSP 75 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---------g~v~vw~~~~~ 75 (239)
...|+|.+-|..+.+.++++.+|. +.|.++.. .|++|++++.. .-|+|||++..
T Consensus 194 ~t~G~V~LrD~~s~~~iht~~aHs--------------~siSDfDv---~GNlLitCG~S~R~~~l~~D~FvkVYDLRmm 256 (1118)
T KOG1275|consen 194 DTRGTVFLRDPNSFETIHTFDAHS--------------GSISDFDV---QGNLLITCGYSMRRYNLAMDPFVKVYDLRMM 256 (1118)
T ss_pred cccceEEeecCCcCceeeeeeccc--------------cceeeeec---cCCeEEEeecccccccccccchhhhhhhhhh
Confidence 346999999999999999999999 88887776 57888888764 45889999987
Q ss_pred CceeeecCCCCEEEEEEecC-CcEEEEeC-CCcEEEEE---ccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 76 DPVMSVNHGSPVESVLCLPS-GGIFVTGG-GLDVCIWD---MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d---~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
+.+.-++......-+.|+|. ...+++++ .|...+-| +.+....+..+..-...+..+.++++++.++.|..+|.|
T Consensus 257 ral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v 336 (1118)
T KOG1275|consen 257 RALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHV 336 (1118)
T ss_pred hccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcE
Confidence 76665554444567788884 23444444 79999988 332222233333444569999999999999999999999
Q ss_pred EEEEcc
Q psy11036 151 KIYEMT 156 (239)
Q Consensus 151 ~i~d~~ 156 (239)
.+|.-+
T Consensus 337 ~~wa~~ 342 (1118)
T KOG1275|consen 337 NLWADR 342 (1118)
T ss_pred eeecCC
Confidence 999744
No 315
>KOG1334|consensus
Probab=98.67 E-value=2e-07 Score=72.31 Aligned_cols=127 Identities=19% Similarity=0.289 Sum_probs=100.4
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcccc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~~~ 158 (239)
+|.+.|..+.|...|..+++++ |..|.+||.......+.-..+|...|....|-|. .+.+++++.||.+++=.+.
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~-- 217 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL-- 217 (559)
T ss_pred CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeec--
Confidence 5899999999999999999999 5999999998444455555689888888889884 4689999999999976655
Q ss_pred eEeeeecceeEEEEEccCC-CEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 159 TVSSFTGGLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~-~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
.++ .+-...+..|.++|..++.-|+. .-|.+++.|+.+.-+|+++..+...+
T Consensus 218 ----------------~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~ 271 (559)
T KOG1334|consen 218 ----------------ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKF 271 (559)
T ss_pred ----------------cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcccee
Confidence 111 12234556799999999999965 45889999999999999887654433
No 316
>KOG1008|consensus
Probab=98.65 E-value=5.9e-09 Score=83.19 Aligned_cols=175 Identities=16% Similarity=0.211 Sum_probs=118.2
Q ss_pred CCeEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCCce-eee--cCCCCEEEEEEec-CCcEEEEeC-----CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSS-DIVISGSYDKTVNVYDTRSPDPV-MSV--NHGSPVESVLCLP-SGGIFVTGG-----GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~-~~l~s~~~dg~v~vw~~~~~~~~-~~~--~~~~~v~~~~~~~-~~~~l~~~~-----~~~i~~~d~ 112 (239)
..+.|+++.-... .+++.|..+|.|-+-.++...-. ..+ ++..++++++|++ |...||+|- +..+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 5677888776333 57888999999999988765432 222 5778999999998 556777765 466999999
Q ss_pred cCCC-eEEE--EEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 113 LGGG-KLLH--KFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 113 ~~~~-~~~~--~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
.... .+.. .+. +......+++|..+.+.+.+|.....++++|++ ........-.+
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR---------------------qs~~~~~svnT 195 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR---------------------QSLDSVSSVNT 195 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhh---------------------hhhhhhhhhhh
Confidence 7321 1111 111 133455688998888999999999999999998 11111112223
Q ss_pred CcEEEEEEcc-CCCeEEEEcCCceEEEEE-ccC-CeeeEEecCC-----CCeeeeEecC
Q psy11036 189 KTVTSLCLAS-GGKRLISASLDHHAKIYE-MVN-FSPVHTLDYP-----SPVLSIDVSM 239 (239)
Q Consensus 189 ~~v~~~~~s~-~~~~l~s~s~d~~i~iwd-~~~-~~~~~~~~~~-----~~v~~~~~sp 239 (239)
..+..+...| .+.++++-. ||.|.+|| ..+ ..++..+.+. ..+..++|+|
T Consensus 196 k~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycP 253 (783)
T KOG1008|consen 196 KYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCP 253 (783)
T ss_pred hhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEecc
Confidence 4566778888 778888766 99999999 333 3344444432 3488888887
No 317
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.65 E-value=1.7e-05 Score=63.28 Aligned_cols=187 Identities=13% Similarity=0.078 Sum_probs=101.8
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---CCC
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---HGS 85 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---~~~ 85 (239)
.|++|+. .|+++..+.-.. +.|.++.|+. + +.|+.-..||.++++|+.... ...++ ...
T Consensus 62 ~I~iys~-sG~ll~~i~w~~--------------~~iv~~~wt~-~-e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~ 123 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDS--------------GRIVGMGWTD-D-EELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEE 123 (410)
T ss_pred EEEEECC-CCCEeEEEEECC--------------CCEEEEEECC-C-CeEEEEEcCCEEEEEeCCCce-eechhhhcccc
Confidence 5888886 566677666555 7899999987 4 455566789999999986333 22221 111
Q ss_pred C-----EEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEE----------EEEcCCCCEEEEEecCCeE
Q psy11036 86 P-----VESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS----------LCLASGGKRLISASLDHHA 150 (239)
Q Consensus 86 ~-----v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~----------i~~~~~~~~l~~~~~d~~i 150 (239)
. +....+..+| .++...++.+.+.+--........+..-...... ..++.+....+....++.+
T Consensus 124 ~v~e~~i~~~~~~~~G-ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i 202 (410)
T PF04841_consen 124 KVLECRIFAIWFYKNG-IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETI 202 (410)
T ss_pred CcccccccccccCCCC-EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEE
Confidence 2 2222333345 3333344444433221011011111100000000 1222233333333333333
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC-
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP- 229 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~- 229 (239)
.+.+-. . . ..+. ..+++..+++||+|+++|.-..+|.+.+....-.+.+..+..+
T Consensus 203 ~~i~~~-------------------~-~---~~i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~ 258 (410)
T PF04841_consen 203 YIIDEN-------------------S-F---KQID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDS 258 (410)
T ss_pred EEEEcc-------------------c-c---cccc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCc
Confidence 322211 0 0 0011 2467999999999999999999999999987767777777644
Q ss_pred -CCeeeeEec
Q psy11036 230 -SPVLSIDVS 238 (239)
Q Consensus 230 -~~v~~~~~s 238 (239)
.....|.|+
T Consensus 259 ~~~p~~~~WC 268 (410)
T PF04841_consen 259 KSPPKQMAWC 268 (410)
T ss_pred CCCCcEEEEE
Confidence 677788875
No 318
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.64 E-value=2.8e-05 Score=61.97 Aligned_cols=200 Identities=14% Similarity=0.059 Sum_probs=112.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEE-EEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRA-GTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
.+|.++.+|.++|+.+...+... .+.+ .... +..++.+..++.+..+|.++++.+......
T Consensus 128 ~~g~l~ald~~tG~~~W~~~~~~---------------~~~ssP~v~---~~~v~v~~~~g~l~ald~~tG~~~W~~~~~ 189 (394)
T PRK11138 128 EKGQVYALNAEDGEVAWQTKVAG---------------EALSRPVVS---DGLVLVHTSNGMLQALNESDGAVKWTVNLD 189 (394)
T ss_pred CCCEEEEEECCCCCCcccccCCC---------------ceecCCEEE---CCEEEEECCCCEEEEEEccCCCEeeeecCC
Confidence 46788889999999887776543 2221 1221 345666778899999999999988776432
Q ss_pred CCEEEE--EEec---CCcEEEEeCCCcEEEEEccCCCeEEEEEeccCC-------ceEEEEEcC--CCCEEEEEecCCeE
Q psy11036 85 SPVESV--LCLP---SGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-------TVTSLCLAS--GGKRLISASLDHHA 150 (239)
Q Consensus 85 ~~v~~~--~~~~---~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~i~~i~~~~--~~~~l~~~~~d~~i 150 (239)
.+...+ .-+| ++..++...++.+..+|.. +++..-+...... ....+.-+| .+..++.++.++.+
T Consensus 190 ~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 190 VPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNL 268 (394)
T ss_pred CCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeE
Confidence 211100 0111 3444444447888888887 5554433221000 001111122 24566667778888
Q ss_pred EEEEcc-cceEeee------------------ecceeEEEEEccCCCEEEEEEecc-cCcEEEEEEccCCCeEEEEcCCc
Q psy11036 151 KIYEMT-LKTVSSF------------------TGGLDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 151 ~i~d~~-~~~~~~~------------------~~~~~i~~~d~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
..+|.. ++.+-.. ..++.+..+|..+... +-....- .....+... .+..|+.++.||
T Consensus 269 ~ald~~tG~~~W~~~~~~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~-~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G 345 (394)
T PRK11138 269 VALDLRSGQIVWKREYGSVNDFAVDGGRIYLVDQNDRVYALDTRGGVE-LWSQSDLLHRLLTAPVL--YNGYLVVGDSEG 345 (394)
T ss_pred EEEECCCCCEEEeecCCCccCcEEECCEEEEEcCCCeEEEEECCCCcE-EEcccccCCCcccCCEE--ECCEEEEEeCCC
Confidence 888876 4433221 2234466666655322 2211110 011111122 255677888999
Q ss_pred eEEEEEccCCeeeEEec
Q psy11036 211 HAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~ 227 (239)
.|...|..+|+.+.+.+
T Consensus 346 ~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 346 YLHWINREDGRFVAQQK 362 (394)
T ss_pred EEEEEECCCCCEEEEEE
Confidence 99999999999988776
No 319
>KOG1920|consensus
Probab=98.56 E-value=2.1e-05 Score=67.79 Aligned_cols=178 Identities=13% Similarity=0.169 Sum_probs=111.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCC-CcEEEEEc----cCC--
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDM----LGG-- 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~----~~~-- 115 (239)
+.|.++.|.. +.+.++.+..+|.|.+-|..+......-.....|.+++|+|++..++.... +++.+..- -..
T Consensus 69 ~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLA-DTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEec-ccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 6899999999 788888888999999988777654333346788999999999999988774 55554322 000
Q ss_pred ----------------CeEEEEEec---------------------cCCceEEEEEcCCCCEEEEEe----cC-CeEEEE
Q psy11036 116 ----------------GKLLHKFTC---------------------HHKTVTSLCLASGGKRLISAS----LD-HHAKIY 153 (239)
Q Consensus 116 ----------------~~~~~~~~~---------------------~~~~i~~i~~~~~~~~l~~~~----~d-~~i~i~ 153 (239)
++.-..+.+ ..+.=+.|+|--||.++++.. .+ ..|++|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 011111111 011224589999999998833 23 799999
Q ss_pred EcccceEee------e-------------------ecceeEEEEEccCC--CEEEEEEecccCcEEEEEEccCCCeEEE-
Q psy11036 154 EMTLKTVSS------F-------------------TGGLDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLIS- 205 (239)
Q Consensus 154 d~~~~~~~~------~-------------------~~~~~i~~~d~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s- 205 (239)
|.++..... . +...+|.++.-+.- ++....+......+..++|+.++..|++
T Consensus 228 drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~ 307 (1265)
T KOG1920|consen 228 DREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVV 307 (1265)
T ss_pred cccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeee
Confidence 987211000 0 22233555543221 1111112222334899999999999987
Q ss_pred --EcCCceEEEEEccCCe
Q psy11036 206 --ASLDHHAKIYEMVNFS 221 (239)
Q Consensus 206 --~s~d~~i~iwd~~~~~ 221 (239)
......|++|-+.+..
T Consensus 308 ~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 308 TSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred ecccccceEEEEEecCeE
Confidence 4455569999887654
No 320
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.54 E-value=6.5e-05 Score=65.68 Aligned_cols=194 Identities=13% Similarity=0.106 Sum_probs=122.9
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CCeEEEEeCCCCCceeee--
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DKTVNVYDTRSPDPVMSV-- 81 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~-- 81 (239)
...|+||+-+ |+...+-..-. +--.+++|.| .|+++++.-. ...|.+|. ++|..-..|
T Consensus 236 ~R~iRVy~Re-G~L~stSE~v~--------------gLe~~l~WrP-sG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l 298 (928)
T PF04762_consen 236 RRVIRVYSRE-GELQSTSEPVD--------------GLEGALSWRP-SGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTL 298 (928)
T ss_pred eeEEEEECCC-ceEEeccccCC--------------CccCCccCCC-CCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEec
Confidence 4678888854 55433333222 3345789999 8999988754 24566665 344333333
Q ss_pred ---cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe--EEEEEec-cCCceEEEEEcCCC-CEEEEEecCCeEEEEE
Q psy11036 82 ---NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK--LLHKFTC-HHKTVTSLCLASGG-KRLISASLDHHAKIYE 154 (239)
Q Consensus 82 ---~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~--~~~~~~~-~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d 154 (239)
.....|..+.|++++..|++.-...|.+|-.. +.. ..+.+.. ....+..+.|+|.. ..|...+.+|.+..++
T Consensus 299 ~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~-NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~ 377 (928)
T PF04762_consen 299 RFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRS-NYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYD 377 (928)
T ss_pred CCCCCCceeeEEEECCCCCEEEEEecCCceEEEee-CCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEE
Confidence 24568999999999999999886679999886 433 2233332 23345569999954 5677777778888777
Q ss_pred cccceE------------eeeecceeEEEEEccCC--CEEE--EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 155 MTLKTV------------SSFTGGLDVCIWDMLGG--GKLL--HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 155 ~~~~~~------------~~~~~~~~i~~~d~~~~--~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+..... .....+..+.+-+++.. ..|+ ..+. -..+|.+++|++++..+++-..||.|.+|...
T Consensus 378 ~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~ 456 (928)
T PF04762_consen 378 FAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWD 456 (928)
T ss_pred EEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCeEEEEECCCCEEEEEec
Confidence 651111 11122333444444332 1122 2232 35689999999998889999999999999854
Q ss_pred C
Q psy11036 219 N 219 (239)
Q Consensus 219 ~ 219 (239)
.
T Consensus 457 ~ 457 (928)
T PF04762_consen 457 L 457 (928)
T ss_pred C
Confidence 3
No 321
>KOG1912|consensus
Probab=98.51 E-value=6.3e-06 Score=67.92 Aligned_cols=151 Identities=17% Similarity=0.263 Sum_probs=107.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecC-----------CcE-EEEeC-CCcEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPS-----------GGI-FVTGG-GLDVC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~-----------~~~-l~~~~-~~~i~ 108 (239)
..-.++.|+| +.+++-|+. ..|.+-|.++-+.+..+ .|+..|+.+.|.|. ... ++++. .|.|.
T Consensus 16 sN~~A~Dw~~--~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 16 SNRNAADWSP--SGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred ccccccccCc--cceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 4466889998 346666655 56889999999988888 58899999999873 123 34444 59999
Q ss_pred EEEccCCCeEEEEEeccCCceEEEEEcC---CC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE
Q psy11036 109 IWDMLGGGKLLHKFTCHHKTVTSLCLAS---GG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF 184 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~~~~~~i~~i~~~~---~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 184 (239)
+||.. ....+..+..|..++..++|-+ +. ..|++-.....+.+|+.. .++.....
T Consensus 93 l~d~~-~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntd--------------------tG~k~Wk~ 151 (1062)
T KOG1912|consen 93 LVDFV-LASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTD--------------------TGEKFWKY 151 (1062)
T ss_pred EEEeh-hhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEcc--------------------CCceeecc
Confidence 99998 7777778888999999999976 33 456676777888888876 34444443
Q ss_pred ecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEc
Q psy11036 185 TCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 185 ~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~ 217 (239)
........++.+.| |.+.+..-+..|.+.+-+.
T Consensus 152 ~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~ 185 (1062)
T KOG1912|consen 152 DYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKD 185 (1062)
T ss_pred ccCCcceeeeeeCCCCcceEEEEccCceEEEEec
Confidence 44344566677777 6666666666677666654
No 322
>KOG0882|consensus
Probab=98.51 E-value=3.3e-06 Score=65.26 Aligned_cols=211 Identities=15% Similarity=0.081 Sum_probs=130.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC--CEEEEeeCCCeEEEEeCCCCCcee-ee--
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS--DIVISGSYDKTVNVYDTRSPDPVM-SV-- 81 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~v~vw~~~~~~~~~-~~-- 81 (239)
|..++++|+++-..+.-++.... ++.+ +...++.+. .+-++.-.++.+.++|-....+.. .+
T Consensus 75 Dhs~KvfDvEn~DminmiKL~~l------------Pg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk 141 (558)
T KOG0882|consen 75 DHSVKVFDVENFDMINMIKLVDL------------PGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK 141 (558)
T ss_pred ccceeEEEeeccchhhhcccccC------------CCce-EEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc
Confidence 78889988877665544433220 0222 222233111 223344567899999976554332 22
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe-----EEEE---------EeccCCceEEEEEcCCCCEEEEEec
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK-----LLHK---------FTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~-----~~~~---------~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
-|..+|.++.+.|.+..+++.. .|.|..|..+...+ .... +.......+++.|+|+|..+.+-+.
T Consensus 142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence 4889999999999999988888 69999998862111 1111 1123456789999999999999999
Q ss_pred CCeEEEEEcc-cceEeeeeccee---------EEEEEcc--CCCEEEEEEecccC-cEEEEEEccCCCeEEEEcCCceEE
Q psy11036 147 DHHAKIYEMT-LKTVSSFTGGLD---------VCIWDML--GGGKLLHKFTCHHK-TVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 147 d~~i~i~d~~-~~~~~~~~~~~~---------i~~~d~~--~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
|..|++++++ ++.++.+..... ..+-.+. ......+.+..|.. .-+.++|...|++|+-++-=| |+
T Consensus 222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik 300 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK 300 (558)
T ss_pred ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence 9999999998 554444411100 1111110 00111112222333 235678999999999887654 88
Q ss_pred EEEccCCeeeEEecCCCC
Q psy11036 214 IYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 214 iwd~~~~~~~~~~~~~~~ 231 (239)
+.++.+++..+.+.-...
T Consensus 301 vin~~tn~v~ri~gk~e~ 318 (558)
T KOG0882|consen 301 VINLDTNTVVRILGKDEA 318 (558)
T ss_pred EEEeecCeEEEEeccchh
Confidence 999999888877753333
No 323
>KOG2114|consensus
Probab=98.48 E-value=6e-05 Score=62.95 Aligned_cols=164 Identities=15% Similarity=0.147 Sum_probs=105.0
Q ss_pred CC-eEEEEEecCCCCEEEEeeCCC-----eEEEEeCCCC------Cce---eeec-----CCCCEEEEEEecCCcEEEEe
Q psy11036 43 DY-VRAGTVSPVSSDIVISGSYDK-----TVNVYDTRSP------DPV---MSVN-----HGSPVESVLCLPSGGIFVTG 102 (239)
Q Consensus 43 ~~-v~~~~~~~~~~~~l~s~~~dg-----~v~vw~~~~~------~~~---~~~~-----~~~~v~~~~~~~~~~~l~~~ 102 (239)
.. |..+.... +.++|++-+.|+ .+++|+++.- +++ +.+. .+.++.+++.+.+-+.+++|
T Consensus 65 ~siv~~L~~~~-~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~G 143 (933)
T KOG2114|consen 65 QSIVQFLYILN-KQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCG 143 (933)
T ss_pred hhhhhHhhccc-CceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEE
Confidence 44 44444443 557888877765 4899998633 223 1222 35678999999998888888
Q ss_pred C-CCcEEEEEccC---CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCC
Q psy11036 103 G-GLDVCIWDMLG---GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG 178 (239)
Q Consensus 103 ~-~~~i~~~d~~~---~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~ 178 (239)
- +|.|..+.-+- .+....-......+|+.+++..++..++-...-..|.+|.+.+ ..
T Consensus 144 f~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g-------------------r~ 204 (933)
T KOG2114|consen 144 FTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSG-------------------RT 204 (933)
T ss_pred ecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecC-------------------CC
Confidence 7 79998885331 1222222233567999999998887744444556778887761 12
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.....+..|..++.|..+++....+++++ +..+.+|+....++...+.
T Consensus 205 p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 205 PSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred cceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeec
Confidence 22334566777888888887555354443 4578888887666655555
No 324
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.46 E-value=4e-06 Score=61.97 Aligned_cols=175 Identities=14% Similarity=0.239 Sum_probs=119.9
Q ss_pred CCeEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCC-------------------c-----------------------ee
Q psy11036 43 DYVRAGTVSPVSS-DIVISGSYDKTVNVYDTRSPD-------------------P-----------------------VM 79 (239)
Q Consensus 43 ~~v~~~~~~~~~~-~~l~s~~~dg~v~vw~~~~~~-------------------~-----------------------~~ 79 (239)
..|..+.|..+.+ ..++..+.|.+|++|.+.... + .+
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 5688888886433 356666789999999875320 0 00
Q ss_pred ee--cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeE--EEEEeccC-----CceEEEEEcCC-CCEEEEEecCCe
Q psy11036 80 SV--NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL--LHKFTCHH-----KTVTSLCLASG-GKRLISASLDHH 149 (239)
Q Consensus 80 ~~--~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~--~~~~~~~~-----~~i~~i~~~~~-~~~l~~~~~d~~ 149 (239)
.. .|...+.++.+..+...++++.+-.|.+|++...... +..++.|. .-|++..|+|. ...+.-.+..|.
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~ 245 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGE 245 (460)
T ss_pred eccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCc
Confidence 01 2555677888988999999998999999998743332 22334443 36889999995 467777888999
Q ss_pred EEEEEcccceEee-------e----------------------e---------cceeEEEEEccCCCEEEEEEecccC--
Q psy11036 150 AKIYEMTLKTVSS-------F----------------------T---------GGLDVCIWDMLGGGKLLHKFTCHHK-- 189 (239)
Q Consensus 150 i~i~d~~~~~~~~-------~----------------------~---------~~~~i~~~d~~~~~~~~~~~~~h~~-- 189 (239)
|++-|++...+.. . . .-..+.+||++....++.+...|..
T Consensus 246 Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~ 325 (460)
T COG5170 246 IKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLM 325 (460)
T ss_pred EEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHH
Confidence 9999998221110 0 1 1123899999998888888765532
Q ss_pred ----------cE---EEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 190 ----------TV---TSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 190 ----------~v---~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
+| ..+.||-|.+.+.+|+.....-||-.
T Consensus 326 ~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 326 DELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred HHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence 23 34678888888999988877777753
No 325
>KOG3617|consensus
Probab=98.46 E-value=7e-06 Score=68.42 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=86.0
Q ss_pred eEEEEEecCCCCEEEEeeC----CCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 45 VRAGTVSPVSSDIVISGSY----DKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~----dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
-+-..|+| ...++++++. .|.|.||- ++|++......+-.+++++|+|..-.|+.+- -|.+.+|... ..+.-
T Consensus 18 sti~SWHP-sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~-~~e~h 94 (1416)
T KOG3617|consen 18 STISSWHP-SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTN-TTETH 94 (1416)
T ss_pred ccccccCC-CCceeEEEEecCCCCceEEEEe-cCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecC-Cceee
Confidence 34568999 6778887653 47888874 5677766665566678899999877777776 4999999986 44444
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.....|..+|..+.|+++|..++++..=|.+.+|...
T Consensus 95 tv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 95 TVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 4445799999999999999999999999999999876
No 326
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.45 E-value=0.00034 Score=55.50 Aligned_cols=186 Identities=13% Similarity=0.126 Sum_probs=122.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS--YDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~v~vw~~~~~~~~~~~~ 82 (239)
..+..|.+.|..+.+........ .....++++|+++...++-. .++++.+.|..+.+......
T Consensus 93 ~~~~~v~vid~~~~~~~~~~~vG---------------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~ 157 (381)
T COG3391 93 GDSNTVSVIDTATNTVLGSIPVG---------------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP 157 (381)
T ss_pred CCCCeEEEEcCcccceeeEeeec---------------cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe
Confidence 34677888887666666655544 24568999994444444444 37899999999888887764
Q ss_pred CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEE-----EEeccCCceEEEEEcCCCCEEEEEecC---CeEEE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLH-----KFTCHHKTVTSLCLASGGKRLISASLD---HHAKI 152 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~-----~~~~~~~~i~~i~~~~~~~~l~~~~~d---~~i~i 152 (239)
....-..++++|+|..+++.. ++.+.+.|.. .....+ ..... ..-..+.++|+|..+...... +.+..
T Consensus 158 vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~-~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~ 235 (381)
T COG3391 158 VGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTS-GNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLK 235 (381)
T ss_pred cCCCcceEEECCCCCeEEEEecCCCeEEEEeCC-CcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEE
Confidence 332238999999999887777 6999999976 333332 12222 234678899999866655443 47776
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEE-EecccCcEEEEEEccCCCeEEEE-cCCceEEEEEccCCeeeEEec
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.|.. ....... ..........+.++|+|..+.+. +..+.+.+-|..+......+.
T Consensus 236 id~~--------------------~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 236 IDTA--------------------TGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred EeCC--------------------CceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence 6665 1121111 11111134567899999988777 445899999998888877765
No 327
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.44 E-value=8.6e-05 Score=46.87 Aligned_cols=101 Identities=20% Similarity=0.245 Sum_probs=70.2
Q ss_pred eEEEEEecC---CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE
Q psy11036 45 VRAGTVSPV---SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 45 v~~~~~~~~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~ 121 (239)
|+++++... +.+.|++|+.|..||+|+- .+.+..+.....|+++.-...+++.++-.+|+|-+|+-. ..+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~---~RlWR 76 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDRS---QRLWR 76 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeCc---ceeee
Confidence 566666653 3478999999999999984 356677777888999988877665555558999999853 33444
Q ss_pred EeccCCceEEEEEcC-C--C-CEEEEEecCCeEE
Q psy11036 122 FTCHHKTVTSLCLAS-G--G-KRLISASLDHHAK 151 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~-~--~-~~l~~~~~d~~i~ 151 (239)
.+.... ++++.+.. + | ..|++|-.+|.|-
T Consensus 77 iKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 77 IKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 443333 55565533 3 3 3788898888764
No 328
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.42 E-value=0.00035 Score=52.61 Aligned_cols=159 Identities=17% Similarity=0.205 Sum_probs=108.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC-eEEEEeCCCCCceeeec-CCCCE--EEEEEecCCcEEEEeC------CCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK-TVNVYDTRSPDPVMSVN-HGSPV--ESVLCLPSGGIFVTGG------GLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg-~v~vw~~~~~~~~~~~~-~~~~v--~~~~~~~~~~~l~~~~------~~~i~~~d~ 112 (239)
.....++.+|.....++.+-.-| ...+||..+++....+. ..+.- -.-.|+++|++|++.. .|.|-|||.
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEEC
Confidence 45667888886667777777766 46789999999887773 22222 2467999999999985 377999999
Q ss_pred cCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-------CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE--
Q psy11036 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-------DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-- 183 (239)
Q Consensus 113 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-- 183 (239)
....+.+.++..|.-.-..+.+.|||+.|+++-- .|..++ ++. +-...+...|..+ ++.+..
T Consensus 85 ~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~-------tM~psL~~ld~~s-G~ll~q~~ 155 (305)
T PF07433_consen 85 ARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLD-------TMQPSLVYLDARS-GALLEQVE 155 (305)
T ss_pred cCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceec-Chh-------hcCCceEEEecCC-Cceeeeee
Confidence 8778888999988877888999999988777621 122221 121 1112234444444 444433
Q ss_pred E--ecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 184 F--TCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 184 ~--~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
+ ..|...|..|++.++|..++..-..|
T Consensus 156 Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg 184 (305)
T PF07433_consen 156 LPPDLHQLSIRHLAVDGDGTVAFAMQYQG 184 (305)
T ss_pred cCccccccceeeEEecCCCcEEEEEecCC
Confidence 4 34778899999999998777654433
No 329
>KOG4640|consensus
Probab=98.41 E-value=2.5e-06 Score=68.51 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=74.9
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE-EEEEccCCCeEE
Q psy11036 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT-SLCLASGGKRLI 204 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~ 204 (239)
...+.-+.|+|.-..+|.+..+|.+.+..+. .+.+..+.-|...++ +++|.|||+.||
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n---------------------~qRlwtip~p~~~v~~sL~W~~DGklla 78 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN---------------------WQRLWTIPIPGENVTASLCWRPDGKLLA 78 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec---------------------cceeEeccCCCCccceeeeecCCCCEEE
Confidence 3467889999999999999999999888766 233333343455555 999999999999
Q ss_pred EEcCCceEEEEEccCCeeeEE--ecCCCCeeeeEecC
Q psy11036 205 SASLDHHAKIYEMVNFSPVHT--LDYPSPVLSIDVSM 239 (239)
Q Consensus 205 s~s~d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp 239 (239)
.|-.||+|++-|.+++..+.. +.....|.++-|.|
T Consensus 79 Vg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 79 VGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred EEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence 999999999999999999988 44677888887753
No 330
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.37 E-value=7.2e-05 Score=55.16 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=88.4
Q ss_pred CCeEEEEeCCCCCceeeecCC---CCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCE
Q psy11036 64 DKTVNVYDTRSPDPVMSVNHG---SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140 (239)
Q Consensus 64 dg~v~vw~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 140 (239)
+|+|..+|..+++.+...... ....+.....++..++...++.+..||.. +++.+.+... ..++.... ...+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~-tG~~~W~~~~-~~~~~~~~-~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAK-TGKVLWRFDL-PGPISGAP-VVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETT-TSEEEEEEEC-SSCGGSGE-EEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECC-CCCEEEEeec-ccccccee-eecccc
Confidence 689999999999988877432 22222233334444444458999999998 7887777664 23222211 224556
Q ss_pred EEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE-Eeccc---CcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 141 LISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-FTCHH---KTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~h~---~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
++.++.++.+..+|.. +++.+.. ..... ..........++..++.+..++.|..+|
T Consensus 79 v~v~~~~~~l~~~d~~--------------------tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d 138 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAK--------------------TGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALD 138 (238)
T ss_dssp EEEEETTSEEEEEETT--------------------TSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEE
T ss_pred cccccceeeeEecccC--------------------CcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEe
Confidence 6777788888888876 2333332 12110 1112222333377888888899999999
Q ss_pred ccCCeeeEEecC
Q psy11036 217 MVNFSPVHTLDY 228 (239)
Q Consensus 217 ~~~~~~~~~~~~ 228 (239)
.++|+.+.....
T Consensus 139 ~~tG~~~w~~~~ 150 (238)
T PF13360_consen 139 PKTGKLLWKYPV 150 (238)
T ss_dssp TTTTEEEEEEES
T ss_pred cCCCcEEEEeec
Confidence 999999888763
No 331
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.35 E-value=0.00058 Score=52.18 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=105.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c-----CCCCEEEEEEecCCcEEEEeCC----------Cc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N-----HGSPVESVLCLPSGGIFVTGGG----------LD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~----------~~ 106 (239)
+.+.++..-. .+..|+++.. -+.+++.+++..+..+ . .....+.....|+|.+.+.... ..
T Consensus 66 ~~~~~~~~~d-~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~ 142 (307)
T COG3386 66 GGFSSGALID-AGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPT 142 (307)
T ss_pred CCcccceeec-CCCeEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCc
Confidence 3344544443 3445554433 3566777656553333 1 2245678888999988775433 01
Q ss_pred EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC-CeEEEEEcccceEeeeecceeEEEEEccCC-CEEEEEE
Q psy11036 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD-HHAKIYEMTLKTVSSFTGGLDVCIWDMLGG-GKLLHKF 184 (239)
Q Consensus 107 i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~ 184 (239)
=.+|.+...+...+.+..+-..-+.|+|+||++.|..+... +.|.-|++.... .... ......+
T Consensus 143 G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~--------------g~~~~~~~~~~~ 208 (307)
T COG3386 143 GSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPAT--------------GPIGGRRGFVDF 208 (307)
T ss_pred ceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCccc--------------CccCCcceEEEc
Confidence 13555542355555555555566889999999877776554 677777665100 0001 1112222
Q ss_pred ecccCcEEEEEEccCCCeEEEEcCCc-eEEEEEccCCeeeEEecCC-CCeeeeEe
Q psy11036 185 TCHHKTVTSLCLASGGKRLISASLDH-HAKIYEMVNFSPVHTLDYP-SPVLSIDV 237 (239)
Q Consensus 185 ~~h~~~v~~~~~s~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 237 (239)
....+..-.++...+|.+.+++-.+| .|.+|+.. |+++..+..+ ..+++++|
T Consensus 209 ~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~F 262 (307)
T COG3386 209 DEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAF 262 (307)
T ss_pred cCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceE
Confidence 23445566778888888776554454 89999987 9999999876 67777776
No 332
>KOG1832|consensus
Probab=98.33 E-value=7.1e-07 Score=74.43 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=106.7
Q ss_pred eeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEEE
Q psy11036 78 VMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH--HAKIY 153 (239)
Q Consensus 78 ~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~--~i~i~ 153 (239)
...+ .+....+|++|+-..+.+++|. .|.|++|+.. ++........|..+|+-+.-+.+|..+++.+.-. ...+|
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~-sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVS-SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEcc-CccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 3444 4678899999999999999999 7999999998 8888888999999999999999998777655433 46789
Q ss_pred Ecc--cceEeeee------------------cceeEEEEEccCCCEEEEEEec---ccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 154 EMT--LKTVSSFT------------------GGLDVCIWDMLGGGKLLHKFTC---HHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 154 d~~--~~~~~~~~------------------~~~~i~~~d~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
++. +...+++. ......+||+.+...+...+.+ .+..-.++.|+|+..+++ .||
T Consensus 1173 ~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG 1249 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG 1249 (1516)
T ss_pred ccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCc
Confidence 987 56666652 2344789999885443332322 222336788999988887 455
Q ss_pred eEEEEEccCCeeeEEec
Q psy11036 211 HAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~ 227 (239)
.+||++..+.++.+.
T Consensus 1250 --vLWDvR~~~aIh~FD 1264 (1516)
T KOG1832|consen 1250 --VLWDVRIPEAIHRFD 1264 (1516)
T ss_pred --eeeeeccHHHHhhhh
Confidence 469998776666553
No 333
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.31 E-value=0.0002 Score=58.86 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=91.0
Q ss_pred CCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC---------------------------------------
Q psy11036 63 YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--------------------------------------- 103 (239)
Q Consensus 63 ~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------------------------------------- 103 (239)
..+.+.+.|.++.+...++...+....++++|+|+++++.+
T Consensus 213 y~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~ 292 (635)
T PRK02888 213 YRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKT 292 (635)
T ss_pred eeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEE
Confidence 34567777887777666665445556677788877776663
Q ss_pred --CCcEEEEEccC----CCeEEEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcc-cceEeeeecceeEEEEEcc
Q psy11036 104 --GLDVCIWDMLG----GGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMT-LKTVSSFTGGLDVCIWDML 175 (239)
Q Consensus 104 --~~~i~~~d~~~----~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~ 175 (239)
++.|.+.|.+. ..+.+..+. -......+.++|||+++++++ .++++.|+|+. .+.... +. + +.
T Consensus 293 V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~--~~--~---~~- 363 (635)
T PRK02888 293 IGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFD--GK--I---KP- 363 (635)
T ss_pred ECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhh--cc--C---Cc-
Confidence 13466666652 123444444 334557899999999877655 58999999988 221100 00 0 10
Q ss_pred CCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
....+.+..- ...-...+|.++|....|--.|..|..|++.+
T Consensus 364 -~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 364 -RDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred -cceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 1112222222 22334678999998888888999999999876
No 334
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.30 E-value=4.4e-06 Score=41.97 Aligned_cols=38 Identities=37% Similarity=0.507 Sum_probs=33.6
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
++...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45566678889999999999999999999999999996
No 335
>KOG2114|consensus
Probab=98.28 E-value=0.00015 Score=60.65 Aligned_cols=173 Identities=17% Similarity=0.221 Sum_probs=109.3
Q ss_pred EEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCC-EEEEEEecCCcEEEEeC-C-C----cEEEEEccCC-----
Q psy11036 49 TVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSP-VESVLCLPSGGIFVTGG-G-L----DVCIWDMLGG----- 115 (239)
Q Consensus 49 ~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~-v~~~~~~~~~~~l~~~~-~-~----~i~~~d~~~~----- 115 (239)
+|++ ++..++.|+.+|.|.+++-. .+.+..+ .++.. |+.+....+..+|++.+ | + .+++|+++..
T Consensus 30 c~~s-~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 30 CCSS-STGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred EEcC-CCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 3456 77899999999998887743 3333444 23344 44444444446777666 4 3 5899999732
Q ss_pred CeEE--EEEec-----cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 116 GKLL--HKFTC-----HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 116 ~~~~--~~~~~-----~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
.+.+ +.+.. ...++.+++.+.+-+.+|+|-.+|.|..+.-+ .++.. +........-.
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GD--i~RDr--------------gsr~~~~~~~~ 171 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGD--ILRDR--------------GSRQDYSHRGK 171 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCc--chhcc--------------ccceeeeccCC
Confidence 1222 12222 24578999999999999999999999887543 11111 11122223346
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCee-eEEec-CCCCeeeeEecC
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP-VHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~-~~~~v~~~~~sp 239 (239)
.+|+.+.+..+++.++-...-..|.+|.+....+ +..+. ++.++++.++++
T Consensus 172 ~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~ 224 (933)
T KOG2114|consen 172 EPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSD 224 (933)
T ss_pred CCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCC
Confidence 7899999999988744444556899999974443 33354 555788777764
No 336
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.27 E-value=5.9e-05 Score=63.92 Aligned_cols=142 Identities=10% Similarity=0.115 Sum_probs=93.9
Q ss_pred CCCEEEE-eeCCCeEEEEeCCCCCceeeecCC--CCEEEEEEec------CCcEEEEeCCCcEEEEEccCCCeEEEEEe-
Q psy11036 54 SSDIVIS-GSYDKTVNVYDTRSPDPVMSVNHG--SPVESVLCLP------SGGIFVTGGGLDVCIWDMLGGGKLLHKFT- 123 (239)
Q Consensus 54 ~~~~l~s-~~~dg~v~vw~~~~~~~~~~~~~~--~~v~~~~~~~------~~~~l~~~~~~~i~~~d~~~~~~~~~~~~- 123 (239)
+.++|+. ......|+-.|++.|+.+..+... .+|..++-.. ..+.++.-+++.+..||.|..+..+..-.
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~ 571 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS 571 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence 4444444 345578999999999999888433 3344443221 23455555689999999996553332111
Q ss_pred ---ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 124 ---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 124 ---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
......+|++-..+| +||+|+.+|.||+||-- +.+....+.+-..+|.+|..+.||
T Consensus 572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~--------------------g~~AKT~lp~lG~pI~~iDvt~DG 630 (794)
T PF08553_consen 572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRL--------------------GKRAKTALPGLGDPIIGIDVTADG 630 (794)
T ss_pred cccccCCCceEEEecCCc-eEEEEeCCCcEEeeccc--------------------chhhhhcCCCCCCCeeEEEecCCC
Confidence 233456777766555 79999999999999843 222233345667899999999999
Q ss_pred CeEEEEcCCceEEEEEc
Q psy11036 201 KRLISASLDHHAKIYEM 217 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~ 217 (239)
++++..+ +..+.+++.
T Consensus 631 kwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 631 KWILATC-KTYLLLIDT 646 (794)
T ss_pred cEEEEee-cceEEEEEE
Confidence 9988665 456777765
No 337
>KOG1645|consensus
Probab=98.26 E-value=4.9e-06 Score=63.42 Aligned_cols=88 Identities=13% Similarity=0.204 Sum_probs=68.3
Q ss_pred EEEEeCCCCCceeee-cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEE
Q psy11036 67 VNVYDTRSPDPVMSV-NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLI 142 (239)
Q Consensus 67 v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~ 142 (239)
+++.+..+.+....+ .+...|..++|+|..+ ++..++ +..|++.|++ +...+..+..+ ..+.+++|..+. +++.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dle-t~~~vssy~a~-~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLE-TSCVVSSYIAY-NQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecc-cceeeeheecc-CCceeeeeccCCcceeE
Confidence 555555555554433 4677899999999777 555666 8999999999 77777777776 789999998866 5677
Q ss_pred EEecCCeEEEEEcc
Q psy11036 143 SASLDHHAKIYEMT 156 (239)
Q Consensus 143 ~~~~d~~i~i~d~~ 156 (239)
+|...|.|.+||++
T Consensus 253 aGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 253 AGLQNGMVLVYDMR 266 (463)
T ss_pred EeccCceEEEEEcc
Confidence 88889999999998
No 338
>KOG3621|consensus
Probab=98.25 E-value=0.00033 Score=57.51 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=80.4
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~ 121 (239)
|.--++.. ...+++.|+.-|.+++|+-..++....-. ..+.+..+..+++..++|+|+ .|.|.++.+......-..
T Consensus 36 v~lTc~ds-t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~ 114 (726)
T KOG3621|consen 36 VKLTCVDA-TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD 114 (726)
T ss_pred EEEEEeec-CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence 43344444 67899999999999999977665443322 344555666777777777777 588999988642221111
Q ss_pred E-----eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 122 F-----TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 122 ~-----~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
+ +.|...|++++|++++..+.+|...|+|.+-.+.
T Consensus 115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred eeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 1 2367899999999999999999999999887765
No 339
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.23 E-value=0.0011 Score=50.58 Aligned_cols=210 Identities=15% Similarity=0.140 Sum_probs=124.4
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe----------eCCCeEEEEeCCCCCc
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG----------SYDKTVNVYDTRSPDP 77 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----------~~dg~v~vw~~~~~~~ 77 (239)
+.++|+|.++++.+..+...- .-.+..+| +++.+.++ -..-.|.+||..+.++
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~----------------~~~~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~ 79 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGF----------------LGNVALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSP 79 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEES----------------SEEEEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEE
T ss_pred ceEEEEECCCCcEEEEeeccc----------------CCceeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcc
Confidence 589999999999888777653 33466788 67766653 2334699999999887
Q ss_pred eeee--cCC--C----CEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 78 VMSV--NHG--S----PVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 78 ~~~~--~~~--~----~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
...+ +.+ . ....++++.+++++++.. ...|.|.|+. .++.+.++... +. ...+-...+.+.+-+.
T Consensus 80 ~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~-~~kvv~ei~~P-GC--~~iyP~~~~~F~~lC~ 155 (342)
T PF06433_consen 80 TGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLA-AKKVVGEIDTP-GC--WLIYPSGNRGFSMLCG 155 (342)
T ss_dssp EEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETT-TTEEEEEEEGT-SE--EEEEEEETTEEEEEET
T ss_pred cceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECC-CCceeeeecCC-CE--EEEEecCCCceEEEec
Confidence 7655 221 1 113357788999888877 5779999998 67777666531 21 1222112245777778
Q ss_pred CCeEEEEEcc--cceEeee---------------------------ecceeEEEEEccCCC-EEEEEEec----------
Q psy11036 147 DHHAKIYEMT--LKTVSSF---------------------------TGGLDVCIWDMLGGG-KLLHKFTC---------- 186 (239)
Q Consensus 147 d~~i~i~d~~--~~~~~~~---------------------------~~~~~i~~~d~~~~~-~~~~~~~~---------- 186 (239)
||.+.-..+. ++..... +-.+.++.-|+.... +.......
T Consensus 156 DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~W 235 (342)
T PF06433_consen 156 DGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGW 235 (342)
T ss_dssp TSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTE
T ss_pred CCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCc
Confidence 8888877776 4433221 112223333443322 11111111
Q ss_pred ccCcEEEEEEccCCCeEEEEc---CCc-------eEEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 187 HHKTVTSLCLASGGKRLISAS---LDH-------HAKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s---~d~-------~i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
-.+.-.-+++++..+.|..-- .++ .|.++|+.+++.+.++..+.++.+|+.+
T Consensus 236 rPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vs 297 (342)
T PF06433_consen 236 RPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVS 297 (342)
T ss_dssp EE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEE
T ss_pred CCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEc
Confidence 011223356666544444321 122 5888999999999999987888888765
No 340
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.21 E-value=0.00045 Score=55.18 Aligned_cols=142 Identities=12% Similarity=0.011 Sum_probs=78.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCC-CCCe-EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTP-QDYV-RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.+|.+.-+|.++|+.+...+..... . .+... ...+ ..+.. .+..++.++.+|.+..+|.++++.+.....
T Consensus 77 ~~g~l~ald~~tG~~~W~~~~~~~~---~--~~~~~~~~~~~~~~~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 148 (394)
T PRK11138 77 RAGLVKALDADTGKEIWSVDLSEKD---G--WFSKNKSALLSGGVTV---AGGKVYIGSEKGQVYALNAEDGEVAWQTKV 148 (394)
T ss_pred CCCeEEEEECCCCcEeeEEcCCCcc---c--ccccccccccccccEE---ECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence 4577888888888877665443200 0 00000 0001 01222 245666778899999999999998877754
Q ss_pred CCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEE-EEEcC--CCCEEEEEecCCeEEEEEcc
Q psy11036 84 GSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS-LCLAS--GGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~-i~~~~--~~~~l~~~~~d~~i~i~d~~ 156 (239)
...+.+--.-.++..++...++.+..+|.. +++.+-........... ..-+| .+..++.++.++.+..+|..
T Consensus 149 ~~~~~ssP~v~~~~v~v~~~~g~l~ald~~-tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~ 223 (394)
T PRK11138 149 AGEALSRPVVSDGLVLVHTSNGMLQALNES-DGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME 223 (394)
T ss_pred CCceecCCEEECCEEEEECCCCEEEEEEcc-CCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence 444332111124544444447899999998 77766555432111000 00011 12356667778888887776
No 341
>KOG1008|consensus
Probab=98.19 E-value=5e-07 Score=72.58 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=100.4
Q ss_pred CCeEEEEEecCCCCEEEEee----CCCeEEEEeCCCC--Ccee--ee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGS----YDKTVNVYDTRSP--DPVM--SV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~----~dg~v~vw~~~~~--~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d 111 (239)
.+.++++|++-+.+.|++|- .|..+.|||+.++ .+.. .+ ........++|..+.+.+.+|. ...+.++|
T Consensus 103 r~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifd 182 (783)
T KOG1008|consen 103 RPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFD 182 (783)
T ss_pred ccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhh
Confidence 78999999997778888773 3467999999876 2222 22 2334556888887777887777 57999999
Q ss_pred ccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecc---
Q psy11036 112 MLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH--- 187 (239)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h--- 187 (239)
++........+ ....+..+...| .+.++++-. ||.|.+||...+ -..++..+...
T Consensus 183 lRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rn------------------ienpl~~i~~~~N~ 241 (783)
T KOG1008|consen 183 LRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRN------------------IENPLQIILRNENK 241 (783)
T ss_pred hhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccchhh------------------hccHHHHHhhCCCC
Confidence 97222222222 234566777888 777887765 999999994300 01111111111
Q ss_pred -cCcEEEEEEccCC-CeEEEEc-CCceEEEEEcc
Q psy11036 188 -HKTVTSLCLASGG-KRLISAS-LDHHAKIYEMV 218 (239)
Q Consensus 188 -~~~v~~~~~s~~~-~~l~s~s-~d~~i~iwd~~ 218 (239)
...+..++|+|.. ..+++.+ ..++|+.||+.
T Consensus 242 ~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 242 KPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 1247889999943 3455555 45789999984
No 342
>KOG4649|consensus
Probab=98.17 E-value=0.0012 Score=48.21 Aligned_cols=112 Identities=17% Similarity=0.124 Sum_probs=81.3
Q ss_pred EecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCc
Q psy11036 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128 (239)
Q Consensus 50 ~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 128 (239)
..++...+++.|+..+.+.--|..+|+.........++.+-+.- -|.+++.|. .|.+.+.+.. ++.....+..-..-
T Consensus 18 V~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~-tGs~~w~f~~~~~v 95 (354)
T KOG4649|consen 18 VCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVK-TGSQIWNFVILETV 95 (354)
T ss_pred EecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEec-chhheeeeeehhhh
Confidence 34445678899999999999999999887665455555554444 366777777 7999999998 77666666543332
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee
Q psy11036 129 VTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 129 i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
=......+++..+..++.|++.+..|.+ ..++...
T Consensus 96 k~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks 131 (354)
T KOG4649|consen 96 KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS 131 (354)
T ss_pred ccceEEcCCCceEEEecCCCcEEEecccccceEEec
Confidence 2334567789999999999999999988 5555443
No 343
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.13 E-value=0.00014 Score=58.37 Aligned_cols=139 Identities=15% Similarity=0.162 Sum_probs=76.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEE-EccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIW-DMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~-d~~~~~~~~~~ 121 (239)
-....+.++| +++.++. ..||.-.++.....+.. ..+......|.+.+++.+.-..+.|.++ +.. .+....
T Consensus 33 ~~p~~ls~np-ngr~v~V-~g~geY~iyt~~~~r~k----~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~--~~~~k~ 104 (443)
T PF04053_consen 33 IYPQSLSHNP-NGRFVLV-CGDGEYEIYTALAWRNK----AFGSGLSFVWSSRNRYAVLESSSTIKIYKNFK--NEVVKS 104 (443)
T ss_dssp S--SEEEE-T-TSSEEEE-EETTEEEEEETTTTEEE----EEEE-SEEEE-TSSEEEEE-TTS-EEEEETTE--E-TT--
T ss_pred cCCeeEEECC-CCCEEEE-EcCCEEEEEEccCCccc----ccCceeEEEEecCccEEEEECCCeEEEEEcCc--cccceE
Confidence 4577999999 7888887 45678888883322221 1244556789886665555557889996 332 111122
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 201 (239)
++. ...+..|-. |..|...+.+ .|.+||+. .++.+..+.. .+|..+.|+++|.
T Consensus 105 i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~--------------------~~~~i~~i~v--~~vk~V~Ws~~g~ 157 (443)
T PF04053_consen 105 IKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWE--------------------TGKLIRRIDV--SAVKYVIWSDDGE 157 (443)
T ss_dssp ----SS-EEEEE----SSSEEEEETT-EEEEE-TT--------------------T--EEEEESS---E-EEEEE-TTSS
T ss_pred EcC-CcccceEEc---CcEEEEECCC-CEEEEEhh--------------------HcceeeEEec--CCCcEEEEECCCC
Confidence 321 123444432 7777777555 78899887 4555555553 3489999999999
Q ss_pred eEEEEcCCceEEEEEc
Q psy11036 202 RLISASLDHHAKIYEM 217 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~ 217 (239)
+++-.+.+ .+.|++.
T Consensus 158 ~val~t~~-~i~il~~ 172 (443)
T PF04053_consen 158 LVALVTKD-SIYILKY 172 (443)
T ss_dssp EEEEE-S--SEEEEEE
T ss_pred EEEEEeCC-eEEEEEe
Confidence 99888755 6677654
No 344
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.12 E-value=1.6e-05 Score=39.74 Aligned_cols=38 Identities=37% Similarity=0.507 Sum_probs=33.8
Q ss_pred eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+....+..|...|.++.|++++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45667778899999999999999999999999999986
No 345
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.11 E-value=0.0008 Score=49.50 Aligned_cols=136 Identities=10% Similarity=0.079 Sum_probs=88.5
Q ss_pred EEEecCCcEEEEeCCCcEEEEEccCCCe-EEEEEeccC---CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeec
Q psy11036 90 VLCLPSGGIFVTGGGLDVCIWDMLGGGK-LLHKFTCHH---KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTG 165 (239)
Q Consensus 90 ~~~~~~~~~l~~~~~~~i~~~d~~~~~~-~~~~~~~~~---~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 165 (239)
++.+.+|+.||+..|..|.+-..+.... .+.+..... -.=..++|+||+..||.+...|+|++||+.+..+..+..
T Consensus 3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p 82 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPP 82 (282)
T ss_pred eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCc
Confidence 5667899999999998888876653322 223333222 345789999999999999999999999998655555522
Q ss_pred ceeEEEEEccCCCEEEEEEecccCcEEEEEEccC------CCeEEEEcCCceEEEEEcc-----CCeeeEEec----CCC
Q psy11036 166 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG------GKRLISASLDHHAKIYEMV-----NFSPVHTLD----YPS 230 (239)
Q Consensus 166 ~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~------~~~l~s~s~d~~i~iwd~~-----~~~~~~~~~----~~~ 230 (239)
... ....-..+|..|.|-+. ...|+.-..+|.++=|-+. ..+...++. ++.
T Consensus 83 ~~~--------------~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~ 148 (282)
T PF15492_consen 83 AMS--------------FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPH 148 (282)
T ss_pred ccc--------------cCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCC
Confidence 110 00112345666666542 1246666678888777653 234444444 567
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
.|+++.++|
T Consensus 149 Gi~~~vy~p 157 (282)
T PF15492_consen 149 GINSAVYHP 157 (282)
T ss_pred ceeEEEEcC
Confidence 888888876
No 346
>KOG3621|consensus
Probab=98.11 E-value=6.4e-05 Score=61.45 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=85.4
Q ss_pred CCCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCe-EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
+...+.--+++..+++++.|.+ |.+.+|+-. .++ ......+..+.+..++.+++..++|.|+..|.|.++.+....-
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~-~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRH-TGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecC-chhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence 3444544556667899999985 999999875 333 2222333455677778899999999999999999998771100
Q ss_pred eeeecceeEEEEEccCCCEEEEE-EecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.. ...+.. -+.|...|++++|++|+..+++|...|+|..-.+.+
T Consensus 111 ~~---------------~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 111 RD---------------LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred Cc---------------ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 00 000111 123778899999999999999999999999888876
No 347
>KOG3617|consensus
Probab=98.11 E-value=6.3e-06 Score=68.66 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=84.5
Q ss_pred EEEEEEecCCcEEEEeC-----CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 87 VESVLCLPSGGIFVTGG-----GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
-+-..|+|...++++++ .|.|.||-- ++++..... ..-.+++++|+|..-.|+.|-.-|.+.+|...
T Consensus 18 sti~SWHPsePlfAVA~fS~er~GSVtIfad--tGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~----- 89 (1416)
T KOG3617|consen 18 STISSWHPSEPLFAVASFSPERGGSVTIFAD--TGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTN----- 89 (1416)
T ss_pred ccccccCCCCceeEEEEecCCCCceEEEEec--CCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecC-----
Confidence 34567999999998886 388998854 454433222 22345679999998889999888999999876
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
..+.-.....|..+|..+.|||+|..|+|+..-|.|.+|....
T Consensus 90 ---------------~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 90 ---------------TTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred ---------------CceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 2333333467999999999999999999999999999998863
No 348
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=0.0025 Score=50.62 Aligned_cols=162 Identities=15% Similarity=0.181 Sum_probs=109.4
Q ss_pred EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCC----CcEEEEEccCCCeEEEE
Q psy11036 46 RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG----LDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~i~~~d~~~~~~~~~~ 121 (239)
..++.++.+.+.++....+..|.+.|..+.+.............++++|+++.+.++.. +.+.+.|.. +.....+
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~-t~~~~~~ 155 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA-TNKVTAT 155 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCC-CCeEEEE
Confidence 46777775555777777779999999888887777755557788999999988887762 667777877 5666666
Q ss_pred EeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
......+ ..+++.|+|..+.... .++.+.+.|.....+..- ..... ... ...-..+.++|+|
T Consensus 156 ~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~------------~~~~~---~~~-~~~P~~i~v~~~g 218 (381)
T COG3391 156 IPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRG------------SVGSL---VGV-GTGPAGIAVDPDG 218 (381)
T ss_pred EecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceecc------------ccccc---ccc-CCCCceEEECCCC
Confidence 5544455 8899999999666554 688898888762111100 00000 111 1223467889998
Q ss_pred CeEEEEcC---CceEEEEEccCCeeeEE
Q psy11036 201 KRLISASL---DHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 201 ~~l~s~s~---d~~i~iwd~~~~~~~~~ 225 (239)
.++..... ++.+...|..++.....
T Consensus 219 ~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 219 NRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred CEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 86654433 36888888888777665
No 349
>KOG4640|consensus
Probab=98.09 E-value=2.5e-05 Score=62.93 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=74.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEE-EEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVE-SVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..|.-+.|+| .-.++|.+..+|.|.+..+. -+.+.+++ +..+++ +++|.|+|+.+++|- ||+|++.|.. .+..+
T Consensus 21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve-~~~~l 97 (665)
T KOG4640|consen 21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVE-KGGRL 97 (665)
T ss_pred cceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEcc-CCCce
Confidence 5688999999 89999999999999999988 66777776 667777 999999999999998 8999999999 44444
Q ss_pred EE-EeccCCceEEEEEcC
Q psy11036 120 HK-FTCHHKTVTSLCLAS 136 (239)
Q Consensus 120 ~~-~~~~~~~i~~i~~~~ 136 (239)
.. .......|.++-|.+
T Consensus 98 ~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWDR 115 (665)
T ss_pred eccccccccchheeeccc
Confidence 43 334566788888863
No 350
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.09 E-value=0.00037 Score=54.74 Aligned_cols=158 Identities=13% Similarity=0.132 Sum_probs=95.9
Q ss_pred CCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe-c-------c---------C
Q psy11036 64 DKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT-C-------H---------H 126 (239)
Q Consensus 64 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~-~-------~---------~ 126 (239)
.+.+.++|+.+++..........+....|+|+|+.++...++.|.++++. .+...+.-. + - -
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~-~~~~~~lT~dg~~~i~nG~~dwvyeEEv~ 100 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLA-TGQETQLTTDGEPGIYNGVPDWVYEEEVF 100 (353)
T ss_dssp EEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETTEEEEESST-TSEEEESES--TTTEEESB--HHHHHHTS
T ss_pred ceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecCceEEEECC-CCCeEEeccccceeEEcCccceecccccc
Confidence 46788999998765444334678899999999999999999999999886 343322111 1 0 1
Q ss_pred CceEEEEEcCCCCEEEEEec-CCeEEEEEcc----c-c---eEeee----ecce----eEEEEEccCCCEEE-EEE---e
Q psy11036 127 KTVTSLCLASGGKRLISASL-DHHAKIYEMT----L-K---TVSSF----TGGL----DVCIWDMLGGGKLL-HKF---T 185 (239)
Q Consensus 127 ~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~----~-~---~~~~~----~~~~----~i~~~d~~~~~~~~-~~~---~ 185 (239)
+.-..+-|+||+++|+.... +..|+.+.+. . . .+..+ .|.. .+.++|+.+..... ... .
T Consensus 101 ~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~ 180 (353)
T PF00930_consen 101 DRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLN 180 (353)
T ss_dssp SSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHH
T ss_pred ccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccC
Confidence 22366889999999887664 4555555543 1 1 23232 2333 37789997754422 222 1
Q ss_pred cccCcEEEEEEccCCCeEEEE--cCC---ceEEEEEccCCee
Q psy11036 186 CHHKTVTSLCLASGGKRLISA--SLD---HHAKIYEMVNFSP 222 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s~--s~d---~~i~iwd~~~~~~ 222 (239)
.-..-+..+.|.++++.|+.. +.+ ..+.++|..+++.
T Consensus 181 ~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~ 222 (353)
T PF00930_consen 181 PQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGET 222 (353)
T ss_dssp TSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTC
T ss_pred CCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCce
Confidence 234568899999999833332 222 3567778876654
No 351
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.06 E-value=0.0037 Score=51.41 Aligned_cols=199 Identities=11% Similarity=0.084 Sum_probs=105.8
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCce-eecccee-----eccCCCCCe-EEEEEecCCCCEEEEeeCCC------------
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTT-IYKVPLM-----LYSTPQDYV-RAGTVSPVSSDIVISGSYDK------------ 65 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~v-~~~~~~~~~~~~l~s~~~dg------------ 65 (239)
+.+|.++.+|..+|+.+..++.... ....+.. .+......+ ...++.+ .+..++.++.++
T Consensus 172 ~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~-~~g~V~vg~~~g~~~~~~~~~~~~ 250 (488)
T cd00216 172 GVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDP-KTNLVYVGTGNGSPWNWGGRRTPG 250 (488)
T ss_pred CCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeC-CCCEEEEECCCCCCCccCCccCCC
Confidence 3568899999999998887765320 0000000 000000111 1244454 456666666554
Q ss_pred ------eEEEEeCCCCCceeeecCCC-CE------EEEEEe----cCCc---EEEEeC-CCcEEEEEccCCCeEEEEEec
Q psy11036 66 ------TVNVYDTRSPDPVMSVNHGS-PV------ESVLCL----PSGG---IFVTGG-GLDVCIWDMLGGGKLLHKFTC 124 (239)
Q Consensus 66 ------~v~vw~~~~~~~~~~~~~~~-~v------~~~~~~----~~~~---~l~~~~-~~~i~~~d~~~~~~~~~~~~~ 124 (239)
.|.-+|.++++....+.... .. ....+. -++. .++++. +|.+...|.+ +++.+-....
T Consensus 251 ~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~-tG~~~W~~~~ 329 (488)
T cd00216 251 DNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRT-TGKLISARPE 329 (488)
T ss_pred CCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECC-CCcEeeEeEe
Confidence 79999999999887763111 01 001111 1232 455555 7999999998 7776655432
Q ss_pred cCCceEEEEEcCCCCEEEEEe------------------cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 125 HHKTVTSLCLASGGKRLISAS------------------LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 125 ~~~~i~~i~~~~~~~~l~~~~------------------~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
. ...++.+| ..+..+. .+|.+.-.|+. + ++.+-+...
T Consensus 330 ~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~-------------------t-G~~~W~~~~ 384 (488)
T cd00216 330 V---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPK-------------------T-GKVVWEKRE 384 (488)
T ss_pred e---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCC-------------------C-CcEeeEeeC
Confidence 1 11233333 2233221 23444444444 2 222211111
Q ss_pred c--c------CcE--EEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCe
Q psy11036 187 H--H------KTV--TSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPV 232 (239)
Q Consensus 187 h--~------~~v--~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v 232 (239)
. . .+. ..+.. .+..|+.++.||.|+.+|.++|+.+.+.+.++.+
T Consensus 385 ~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~ 438 (488)
T cd00216 385 GTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRTPSGI 438 (488)
T ss_pred CccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEECCCCc
Confidence 0 0 111 11222 4678888999999999999999999988865443
No 352
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.05 E-value=0.00026 Score=60.20 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=94.6
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEec----CCCCEEEEeeCCCeEEEEeCCCCC--cee
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP----VSSDIVISGSYDKTVNVYDTRSPD--PVM 79 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~~dg~v~vw~~~~~~--~~~ 79 (239)
....|+-.|++.|+.+..+..+.. .+|..++-.. ..+..-+.|-.+..+..||.+-.. .+.
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~-------------~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~ 568 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDD-------------IPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVD 568 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCC-------------cceeEecccccccccCCCceEEEECCCceEEeccCCCCCceee
Confidence 346788889999999999998861 2245443321 123445667778889999988542 221
Q ss_pred ----eecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 80 ----SVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 80 ----~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
.+......+|++-..+|.+.+...+|.|++||-. ..+....+.+...+|..|..+.||+++++.+ +..+.+++.
T Consensus 569 ~~~k~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 569 SQSKQYSSKNNFSCFATTEDGYIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred ccccccccCCCceEEEecCCceEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 1234567788888887755554448999999954 4444455667789999999999999987765 556677776
Q ss_pred c
Q psy11036 156 T 156 (239)
Q Consensus 156 ~ 156 (239)
.
T Consensus 647 ~ 647 (794)
T PF08553_consen 647 L 647 (794)
T ss_pred e
Confidence 4
No 353
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.00 E-value=0.004 Score=48.30 Aligned_cols=131 Identities=11% Similarity=0.084 Sum_probs=82.0
Q ss_pred CEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeee-
Q psy11036 8 LIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVMSV- 81 (239)
Q Consensus 8 g~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~~~- 81 (239)
|.|.++++.+. ..+..+..+. .+++|++++-.. +. |+.+. ++.|.+|++...+ ....-
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~------------~~g~V~ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~~ 125 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTE------------VKGPVTAICSFN--GR-LVVAV-GNKLYVYDLDNSKTLLKKAF 125 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEE------------ESS-EEEEEEET--TE-EEEEE-TTEEEEEEEETTSSEEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEe------------ecCcceEhhhhC--CE-EEEee-cCEEEEEEccCcccchhhhe
Confidence 99999999874 2222222111 018899998773 44 44333 4789999998777 33322
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.....+.++... +.++++|. ...+.++..+.....+..+.. ....++++.+-++++.++.+..+|.+.++...
T Consensus 126 ~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 126 YDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp E-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 344466666655 55888887 577887755533443433332 34468888888666799999999999998876
No 354
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.99 E-value=0.0049 Score=48.98 Aligned_cols=181 Identities=14% Similarity=0.184 Sum_probs=106.3
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------------------------------------------ceee
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-------------------------------------------PVMS 80 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-------------------------------------------~~~~ 80 (239)
.|+.+.|.+ +..-|++|...|.|.+|.....+ +...
T Consensus 3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEET-TTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 588899998 67788888889999888643211 0001
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe--c------cCCceEEEEEcC-----CC---CEEE
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT--C------HHKTVTSLCLAS-----GG---KRLI 142 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~--~------~~~~i~~i~~~~-----~~---~~l~ 142 (239)
+ ...++|++++.+.-| ++++|. +|.+.|.|+| ....+..-. . ....++++.|.. |+ -.++
T Consensus 82 ~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~R-GPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~ 159 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLR-GPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL 159 (395)
T ss_dssp E---S-SEEEEEE-BTS-EEEEEETTSEEEEEETT-TTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred eeccCCcEeEEecCCCc-EEEEEecCCcEEEEECC-CCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence 1 135789999987544 777776 7999999998 655555422 1 233678888862 33 3688
Q ss_pred EEecCCeEEEEEcc----cceEeee-----------------------------------------------ecceeEEE
Q psy11036 143 SASLDHHAKIYEMT----LKTVSSF-----------------------------------------------TGGLDVCI 171 (239)
Q Consensus 143 ~~~~d~~i~i~d~~----~~~~~~~-----------------------------------------------~~~~~i~~ 171 (239)
+|...|.+.+|.+. +.-...+ ++..++++
T Consensus 160 vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv 239 (395)
T PF08596_consen 160 VGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRV 239 (395)
T ss_dssp EEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEE
T ss_pred EEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEE
Confidence 89999999999775 1111111 23444666
Q ss_pred EEccCCCEEEEEEecccCcEEEEEEc-----cCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 172 WDMLGGGKLLHKFTCHHKTVTSLCLA-----SGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 172 ~d~~~~~~~~~~~~~h~~~v~~~~~s-----~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
+...+.....+.+ ...-....+++- ..+..|++-..+|.|++|.+...+.+..+..
T Consensus 240 ~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l 300 (395)
T PF08596_consen 240 FKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSL 300 (395)
T ss_dssp E-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-
T ss_pred EeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccC
Confidence 6665533333333 221223334442 3466788888999999999999998888774
No 355
>KOG2395|consensus
Probab=97.96 E-value=0.00029 Score=56.16 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=94.7
Q ss_pred EEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCc--------EEEEeCCCcEEEEEccCCCe-EEEEEeccC-
Q psy11036 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG--------IFVTGGGLDVCIWDMLGGGK-LLHKFTCHH- 126 (239)
Q Consensus 57 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~~~i~~~d~~~~~~-~~~~~~~~~- 126 (239)
+|.++.....++-.|++.|+.+........|.-+.+.|+.+ .|+.-++..|+-||++..+. .+...++|.
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 44556666678888999999988886666677777777543 44444578899999986555 333333332
Q ss_pred ---CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE
Q psy11036 127 ---KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203 (239)
Q Consensus 127 ---~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 203 (239)
....|++-..+ .++++|+.+|.|++||-- ..+....+.+-..+|..+..+.+|+++
T Consensus 428 ~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri--------------------~~~AKTAlPgLG~~I~hVdvtadGKwi 486 (644)
T KOG2395|consen 428 STKNNFSCFATTES-GYIVVGSLKGDIRLYDRI--------------------GRRAKTALPGLGDAIKHVDVTADGKWI 486 (644)
T ss_pred ccccccceeeecCC-ceEEEeecCCcEEeehhh--------------------hhhhhhcccccCCceeeEEeeccCcEE
Confidence 23444444433 589999999999999854 222333356677899999999999998
Q ss_pred EEEcCCceEEEEEc
Q psy11036 204 ISASLDHHAKIYEM 217 (239)
Q Consensus 204 ~s~s~d~~i~iwd~ 217 (239)
+..+ +..+.+-++
T Consensus 487 l~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 487 LATC-KTYLLLIDT 499 (644)
T ss_pred EEec-ccEEEEEEE
Confidence 8665 445555554
No 356
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.95 E-value=0.0027 Score=47.06 Aligned_cols=163 Identities=13% Similarity=0.180 Sum_probs=101.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCe-EEEEeCCCCCceeee-cCCCC--EEEEEEecCCcEEEEeC---C---CcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKT-VNVYDTRSPDPVMSV-NHGSP--VESVLCLPSGGIFVTGG---G---LDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~-v~vw~~~~~~~~~~~-~~~~~--v~~~~~~~~~~~l~~~~---~---~~i~~~d~ 112 (239)
..-..++++|....-++.+-.-|+ ..++|....+...++ ..++. --.=.|+|+|.+|++.. | |.|-+||.
T Consensus 68 aR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 68 ARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred cccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence 345578888866666676666665 457888877766655 21111 11235899999999875 2 67999999
Q ss_pred cCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE-EcccceEeeeecceeEEEEEccCCCEEE--EEEe--cc
Q psy11036 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY-EMTLKTVSSFTGGLDVCIWDMLGGGKLL--HKFT--CH 187 (239)
Q Consensus 113 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~-d~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~--~h 187 (239)
+...+.+.++..|.-.-..+.|.+||+.++.+ +|-|... |.-...+.--+-...+.+.|..+ ++++ .++. .+
T Consensus 148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva--nGGIethpdfgR~~lNldsMePSlvlld~at-G~liekh~Lp~~l~ 224 (366)
T COG3490 148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVA--NGGIETHPDFGRTELNLDSMEPSLVLLDAAT-GNLIEKHTLPASLR 224 (366)
T ss_pred ccccceecccccCCcCcceeEEecCCcEEEEe--CCceecccccCccccchhhcCccEEEEeccc-cchhhhccCchhhh
Confidence 97778888899998888999999999998876 3444444 22111110001111233334222 2222 2222 34
Q ss_pred cCcEEEEEEccCCCeEEEEcC
Q psy11036 188 HKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 188 ~~~v~~~~~s~~~~~l~s~s~ 208 (239)
...|..+...+||..++.+-.
T Consensus 225 ~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 225 QLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred hcceeeeeeCCCCcEEEEEEe
Confidence 566888888888887776543
No 357
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.93 E-value=0.0025 Score=53.31 Aligned_cols=106 Identities=13% Similarity=0.016 Sum_probs=60.4
Q ss_pred CCeEEEEEecCCCCEEEEee------CCC--eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCC-c-EEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGS------YDK--TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGL-D-VCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~------~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~-i~~~d~ 112 (239)
..+...+++| +++.++... .|. .|.+.+.. +.. ..+-.....+.-.|+|+|..+.+..++ . +++.+-
T Consensus 350 ~~vsspaiSp-dG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSR-SGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECC-CCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecCCCCCCceECCCCCceEEEecCcceEEEecc
Confidence 4577899999 666655433 243 45555542 222 333222347888999998877766532 2 223222
Q ss_pred cCCCeEEE-EEe------ccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 113 LGGGKLLH-KFT------CHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 113 ~~~~~~~~-~~~------~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
...++... .+. .....|..+.|+|||..++... ++.|.+
T Consensus 427 ~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 427 PATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 11111110 000 2346799999999999888765 466665
No 358
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.89 E-value=0.0019 Score=40.91 Aligned_cols=99 Identities=20% Similarity=0.396 Sum_probs=66.4
Q ss_pred EEEEEEec---CC-cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 87 VESVLCLP---SG-GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 87 v~~~~~~~---~~-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
|+++++.. +| ..|++|+ |..|++|+- .+.+.++.. ...|+.++-... ..++.+..+|+|-+|+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~---~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~----- 71 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG---DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRS----- 71 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC---CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCc-----
Confidence 56676654 22 4666666 799999984 567777774 456677766655 679999999999999865
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CC---CeEEEEcCCceEE
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GG---KRLISASLDHHAK 213 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~---~~l~s~s~d~~i~ 213 (239)
.++|-+.+ ...+.++.+.. ++ .-|++|-.+|.|-
T Consensus 72 -------~RlWRiKS-----------K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 72 -------QRLWRIKS-----------KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -------ceeeeecc-----------CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 45555443 22355555443 32 3688888888764
No 359
>KOG4649|consensus
Probab=97.85 E-value=0.0053 Score=44.95 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=48.7
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEE-EEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVE-SVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
+++++.|...|.+++.+.++|.....+...+.|. .....+++..+..++ |++....|.+ +...+.
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~-~~~cVy 129 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPK-TYGCVY 129 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEeccc-ccceEE
Confidence 5678999999999999999998877774334442 234567888898888 8999988887 443333
No 360
>KOG2079|consensus
Probab=97.85 E-value=0.00095 Score=57.57 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=74.4
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCc--eeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceE
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDP--VMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVT 130 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~ 130 (239)
-+..++.|+..|.+...|+...-. .......++|++++|+.+|+.++.|- +|.|.+||+. .++.++.+..|..+.+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~-~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMH-RAKILKVITEHGAPVT 176 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEcc-CCcceeeeeecCCccc
Confidence 345788888889998888765322 11124678999999999999999887 7999999998 7788888887777766
Q ss_pred EEEE---cCCCCEEEEEecCCeEEEEEcc
Q psy11036 131 SLCL---ASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 131 ~i~~---~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+-+ ..++..++++...|. +|.+.
T Consensus 177 ~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 177 GVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred eEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 6544 334556778777776 56554
No 361
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.83 E-value=0.011 Score=48.67 Aligned_cols=208 Identities=12% Similarity=0.084 Sum_probs=102.4
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeE--EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVR--AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
.++.|+-.|..+++.+..++..... ......+. .+... ++..++.++.++.|..+|.++++.+..+..
T Consensus 69 ~~g~l~AlD~~tG~~~W~~~~~~~~--------~~~~~~~~~~g~~~~--~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 69 SHSALFALDAATGKVLWRYDPKLPA--------DRGCCDVVNRGVAYW--DPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred CCCcEEEEECCCChhhceeCCCCCc--------cccccccccCCcEEc--cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 3577788888888877666544200 00000010 11111 226777788899999999999998877743
Q ss_pred CCCE---EEEEEec--CCcEEEEeC----------CCcEEEEEccCCCeEEEEEeccCCc--------------------
Q psy11036 84 GSPV---ESVLCLP--SGGIFVTGG----------GLDVCIWDMLGGGKLLHKFTCHHKT-------------------- 128 (239)
Q Consensus 84 ~~~v---~~~~~~~--~~~~l~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~-------------------- 128 (239)
.... ..+.-+| .+..++++. ++.+..+|.. +++.+-........
T Consensus 139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~-TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVE-TGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECC-CCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 3221 1111111 123344432 4668888887 66666555432110
Q ss_pred e-EEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec--cc--------CcE-EEEEE
Q psy11036 129 V-TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC--HH--------KTV-TSLCL 196 (239)
Q Consensus 129 i-~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~--------~~v-~~~~~ 196 (239)
+ ...++.+.+..++.++.++..--|..+... ..-...+.+.-+|..+ ++.+-.++. |. .++ ..+.
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~-~~~~~~~~l~Ald~~t-G~~~W~~~~~~~~~~~~~~~s~p~~~~~~- 294 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTP-GDNLYTDSIVALDADT-GKVKWFYQTTPHDLWDYDGPNQPSLADIK- 294 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCC-CCCCceeeEEEEcCCC-CCEEEEeeCCCCCCcccccCCCCeEEecc-
Confidence 0 123444455667777666521000000000 0000011233344433 233222221 11 111 1110
Q ss_pred ccCCC---eEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 197 ASGGK---RLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 197 s~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.-++. .++.++.+|.+...|.++|+++.+..
T Consensus 295 ~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~ 328 (488)
T cd00216 295 PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARP 328 (488)
T ss_pred ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeE
Confidence 01333 67788899999999999999987654
No 362
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.80 E-value=0.0079 Score=48.56 Aligned_cols=134 Identities=16% Similarity=0.166 Sum_probs=75.2
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe------------EEEEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK------------LLHKF 122 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~------------~~~~~ 122 (239)
|.+|+..+.+ .|.+||+.+++.+..+.... |..+.|++++.+++..++..+.+++.. .+ .+..+
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~~i~il~~~--~~~~~~~~~~g~e~~f~~~ 192 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKDSIYILKYN--LEAVAAIPEEGVEDAFELI 192 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S-SEEEEEE---HHHHHHBTTTB-GGGEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCCeEEEEEec--chhcccccccCchhceEEE
Confidence 6667666554 89999999999999987554 899999999999999998888888764 23 44444
Q ss_pred eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe
Q psy11036 123 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 202 (239)
Q Consensus 123 ~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 202 (239)
......|.+.+|..+ .++-.+.. .++.+ - ++ ....+.. -..++.-+.+.|..+.
T Consensus 193 ~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl--~--------~G----------e~~~i~~---ld~~~yllgy~~~~~~ 246 (443)
T PF04053_consen 193 HEISERIKSGCWVED--CFIYTTSN-HLKYL--V--------NG----------ETGIIAH---LDKPLYLLGYLPKENR 246 (443)
T ss_dssp EEE-S--SEEEEETT--EEEEE-TT-EEEEE--E--------TT----------EEEEEEE----SS--EEEEEETTTTE
T ss_pred EEecceeEEEEEEcC--EEEEEcCC-eEEEE--E--------cC----------CcceEEE---cCCceEEEEEEccCCE
Confidence 444678888888655 44444333 55542 1 00 0111111 1345566667776677
Q ss_pred EEEEcCCceEEEEEcc
Q psy11036 203 LISASLDHHAKIYEMV 218 (239)
Q Consensus 203 l~s~s~d~~i~iwd~~ 218 (239)
+.....|+.|..+.+.
T Consensus 247 ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 247 LYLIDRDGNVISYELD 262 (443)
T ss_dssp EEEE-TT--EEEEE--
T ss_pred EEEEECCCCEEEEEEC
Confidence 7777788888777654
No 363
>KOG2444|consensus
Probab=97.80 E-value=3.7e-05 Score=54.56 Aligned_cols=140 Identities=13% Similarity=0.068 Sum_probs=80.1
Q ss_pred EEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEE-
Q psy11036 57 IVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSL- 132 (239)
Q Consensus 57 ~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i- 132 (239)
.+..-+.||.|+-++++.-+.-..- .+...-.-+ .-+..+++|+ +|.|.+|.....+............|.++
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~---~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~I 108 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEGQRVV---TASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGI 108 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcceeec---ccCceEEeecccceEEEecCCccchHHHhhhcccccceecc
Confidence 3444567788888877644321111 111111111 2244555665 89999998763333222222223333333
Q ss_pred EEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEE--cCC
Q psy11036 133 CLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISA--SLD 209 (239)
Q Consensus 133 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~--s~d 209 (239)
.-..++.+.++++.||.|+.|++. ..+.+.....|. .++..+..+..+++++.+ |.|
T Consensus 109 p~~~~~~~~c~~~~dg~ir~~n~~--------------------p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d 168 (238)
T KOG2444|consen 109 PNGRDSSLGCVGAQDGRIRACNIK--------------------PNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHD 168 (238)
T ss_pred ccccccceeEEeccCCceeeeccc--------------------cCceeeeeccccCCCcceeEEecCCceEEeeccccc
Confidence 233455688899999999999988 233333334555 455566666667777777 777
Q ss_pred ceEEEEEccC
Q psy11036 210 HHAKIYEMVN 219 (239)
Q Consensus 210 ~~i~iwd~~~ 219 (239)
..++.|++..
T Consensus 169 ~~~k~W~ve~ 178 (238)
T KOG2444|consen 169 RVLKKWNVEK 178 (238)
T ss_pred hhhhhcchhh
Confidence 7788887753
No 364
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.74 E-value=0.01 Score=44.89 Aligned_cols=178 Identities=15% Similarity=0.193 Sum_probs=101.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee---------------eecCCCCEEEEE---EecCCcEEEEeCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM---------------SVNHGSPVESVL---CLPSGGIFVTGGG 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~---------------~~~~~~~v~~~~---~~~~~~~l~~~~~ 104 (239)
..|..+...| +-+.|++-+ |+.+.++++....... .+.....+...+ -......++++..
T Consensus 36 ~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~k 113 (275)
T PF00780_consen 36 SSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVK 113 (275)
T ss_pred ceEEEEEEec-ccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEEC
Confidence 3499999998 556555543 5999999987554333 222333444444 2224456666667
Q ss_pred CcEEEEEccCC---C-eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee---ec-----------c
Q psy11036 105 LDVCIWDMLGG---G-KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF---TG-----------G 166 (239)
Q Consensus 105 ~~i~~~d~~~~---~-~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~-----------~ 166 (239)
..|.+|..... . +..+++. ....+..++|. ++.++.|..++ ..+.|+.......+ .. .
T Consensus 114 k~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~ 189 (275)
T PF00780_consen 114 KKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSS 189 (275)
T ss_pred CEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc-eEEEecCCCCceEEeCccCCcchhhhcccCC
Confidence 89999888642 2 3555555 45778899997 55677776544 67777772111111 11 1
Q ss_pred eeEEEEEccCC----------------CEEE--EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 167 LDVCIWDMLGG----------------GKLL--HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 167 ~~i~~~d~~~~----------------~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
..+.+..+..+ +++. ..+.- ......+++. ..+|+..+. +.|-||++.+++.++++..
T Consensus 190 ~~~~~~~~~~~e~Ll~~~~~g~fv~~~G~~~r~~~i~W-~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 190 KPLGIFQLSDNEFLLCYDNIGVFVNKNGEPSRKSTIQW-SSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred CceEEEEeCCceEEEEecceEEEEcCCCCcCcccEEEc-CCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEEC
Confidence 11333333221 1111 11111 1233344443 457776665 5599999999999999985
Q ss_pred CC
Q psy11036 229 PS 230 (239)
Q Consensus 229 ~~ 230 (239)
++
T Consensus 266 ~~ 267 (275)
T PF00780_consen 266 PN 267 (275)
T ss_pred CC
Confidence 44
No 365
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.70 E-value=0.012 Score=44.52 Aligned_cols=149 Identities=17% Similarity=0.217 Sum_probs=91.0
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE------------
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK------------ 121 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~------------ 121 (239)
.++.|+.|..+| +.+++..............+|..+...|+-+.+++-.|+.+.++++.. -.....
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~-l~~~~~~~~~~~~~~~~~ 83 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDS-LEPVSTSAPLAFPKSRSL 83 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEcCCccEEEEchh-hccccccccccccccccc
Confidence 577889999988 899999444444444444559999999998889888899999999872 221110
Q ss_pred --EeccCCceEEEE--EcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCC-EEEEEEecccCcEEEEEE
Q psy11036 122 --FTCHHKTVTSLC--LASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 122 --~~~~~~~i~~i~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~h~~~v~~~~~ 196 (239)
.......+..++ -...+...++......|.+|..... .... ....++.- ...+..++|
T Consensus 84 ~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~----------------~~~f~~~~ke~~l-p~~~~~i~~ 146 (275)
T PF00780_consen 84 PTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDP----------------RNSFSKLLKEISL-PDPPSSIAF 146 (275)
T ss_pred cccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECC----------------cccccceeEEEEc-CCCcEEEEE
Confidence 111223444444 1123333444445558887776610 0012 33444443 467888888
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeE
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~ 224 (239)
. ++.++.|..+ ...+.|+.++....
T Consensus 147 ~--~~~i~v~~~~-~f~~idl~~~~~~~ 171 (275)
T PF00780_consen 147 L--GNKICVGTSK-GFYLIDLNTGSPSE 171 (275)
T ss_pred e--CCEEEEEeCC-ceEEEecCCCCceE
Confidence 8 5566666544 47778887665543
No 366
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.67 E-value=0.00021 Score=37.93 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=30.8
Q ss_pred cCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 188 HKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 188 ~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
...|..++|+|...+||.++.||.|.+|++ +++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 456999999999999999999999999999 66544
No 367
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.65 E-value=0.014 Score=43.69 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=86.2
Q ss_pred CeEEEEEecCCCCEEEEee-CCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEE-ccCCCeEEE
Q psy11036 44 YVRAGTVSPVSSDIVISGS-YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWD-MLGGGKLLH 120 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d-~~~~~~~~~ 120 (239)
.+.+.++++ +++.++... .++.-.+|-...+...........+..-.|++++...++.. +....++. .........
T Consensus 25 ~~~s~AvS~-dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~ 103 (253)
T PF10647_consen 25 DVTSPAVSP-DGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPV 103 (253)
T ss_pred cccceEECC-CCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeE
Confidence 688999999 566554433 33334444444444444333445788889999988777766 45555553 221111222
Q ss_pred EEecc--CCceEEEEEcCCCCEEEEEe---cCCeEEEEEcc--cce-EeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 121 KFTCH--HKTVTSLCLASGGKRLISAS---LDHHAKIYEMT--LKT-VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 121 ~~~~~--~~~i~~i~~~~~~~~l~~~~---~d~~i~i~d~~--~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
..... ...|..+.++|||..++... .++.|.+--+. ..- ...+ ..+..........+.
T Consensus 104 ~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l--------------~~~~~~~~~~~~~v~ 169 (253)
T PF10647_consen 104 EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRL--------------TGPRRVAPPLLSDVT 169 (253)
T ss_pred EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCccee--------------ccceEecccccCcce
Confidence 22211 22899999999999887766 34666665443 000 0011 112222223346789
Q ss_pred EEEEccCCCeEEEEcC
Q psy11036 193 SLCLASGGKRLISASL 208 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~ 208 (239)
.+.|.+++.+++.+..
T Consensus 170 ~v~W~~~~~L~V~~~~ 185 (253)
T PF10647_consen 170 DVAWSDDSTLVVLGRS 185 (253)
T ss_pred eeeecCCCEEEEEeCC
Confidence 9999999887776654
No 368
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.63 E-value=0.02 Score=45.14 Aligned_cols=80 Identities=10% Similarity=0.007 Sum_probs=54.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-C--
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-H-- 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~-- 83 (239)
.+.+.|||+++++....... . ..+....|+| +++.++-.. ++.|.+.+..+++..+.-. .
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-~--------------~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~ 84 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-P--------------PKLQDAKWSP-DGKYIAFVR-DNNLYLRDLATGQETQLTTDGEP 84 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-E--------------TTBSEEEE-S-SSTEEEEEE-TTEEEEESSTTSEEEESES--TT
T ss_pred ceeEEEEecCCCceEECcCC-c--------------cccccceeec-CCCeeEEEe-cCceEEEECCCCCeEEeccccce
Confidence 37889999988765443333 3 7788999999 688877654 5789999987774433211 1
Q ss_pred ---------------CCCEEEEEEecCCcEEEEeC
Q psy11036 84 ---------------GSPVESVLCLPSGGIFVTGG 103 (239)
Q Consensus 84 ---------------~~~v~~~~~~~~~~~l~~~~ 103 (239)
-+.-.++.|+|++++|+...
T Consensus 85 ~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~ 119 (353)
T PF00930_consen 85 GIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLR 119 (353)
T ss_dssp TEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEE
T ss_pred eEEcCccceeccccccccccceEECCCCCEEEEEE
Confidence 12235788999999998875
No 369
>KOG2079|consensus
Probab=97.61 E-value=0.00047 Score=59.34 Aligned_cols=62 Identities=26% Similarity=0.272 Sum_probs=48.0
Q ss_pred CCcEEEEeCC-CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 95 SGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 95 ~~~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+..++.+++ |.+...|.+.+-.+...-..-.++|++++|+.+|..++.|-.+|.|.+||+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~ 160 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMH 160 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEcc
Confidence 3556777775 8898888863322233333456799999999999999999999999999998
No 370
>KOG1920|consensus
Probab=97.56 E-value=0.0045 Score=54.25 Aligned_cols=130 Identities=16% Similarity=0.195 Sum_probs=83.5
Q ss_pred EEEEEecCCCCEEEEe-----eCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCC
Q psy11036 46 RAGTVSPVSSDIVISG-----SYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGG 115 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~-----~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~ 115 (239)
+.+.|-- +++++++. ..-+.+++||.+ +....+- +..+.-.+++|-|.|..+++.. ++.|.++.-+
T Consensus 199 ~~IsWRg-Dg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-- 274 (1265)
T KOG1920|consen 199 TSISWRG-DGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-- 274 (1265)
T ss_pred ceEEEcc-CCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC--
Confidence 3588887 78888872 222799999977 4332222 3344556899999999999875 4678888754
Q ss_pred CeEEE----EEeccCCceEEEEEcCCCCEEEE---EecCCeEEEEEcc-----cceEeeeecceeEEEEEccCCCEE
Q psy11036 116 GKLLH----KFTCHHKTVTSLCLASGGKRLIS---ASLDHHAKIYEMT-----LKTVSSFTGGLDVCIWDMLGGGKL 180 (239)
Q Consensus 116 ~~~~~----~~~~~~~~i~~i~~~~~~~~l~~---~~~d~~i~i~d~~-----~~~~~~~~~~~~i~~~d~~~~~~~ 180 (239)
+-.-. .+.....++..++|+.++..|++ ......|++|-+. .++...+++. .+..||..+....
T Consensus 275 GL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~-~~~~W~p~~~~~L 350 (1265)
T KOG1920|consen 275 GLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQK-ALLMWDPVTEKTL 350 (1265)
T ss_pred CccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccc-ccccccCCCceeE
Confidence 32222 12223345899999999999888 5555669999876 2222233222 2367877654333
No 371
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.55 E-value=0.0097 Score=48.58 Aligned_cols=151 Identities=13% Similarity=0.169 Sum_probs=89.9
Q ss_pred CCeEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeeecCCCCEEEEEEecC----C-cEEEEeCCCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGS--YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPS----G-GIFVTGGGLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~--~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~----~-~~l~~~~~~~i~~~d~~~~ 115 (239)
.++..++|.. +.+.+++.- .+|.+++=|. +.+ +.-+.|..+.|.|- . .+||+-....|.+|.+...
T Consensus 20 HPvhGlaWTD-GkqVvLT~L~l~~gE~kfGds---~vi---GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s 92 (671)
T PF15390_consen 20 HPVHGLAWTD-GKQVVLTDLQLHNGEPKFGDS---KVI---GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS 92 (671)
T ss_pred ccccceEecC-CCEEEEEeeeeeCCccccCCc---cEe---eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence 5788999985 555666543 2344433221 122 33355889999984 2 3566666899999998621
Q ss_pred ----CeEEEEEe-ccCC----ceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 116 ----GKLLHKFT-CHHK----TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 116 ----~~~~~~~~-~~~~----~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
.+.+.... .... --..+.|+|....|++-.....-.+++++ ....+....++
T Consensus 93 ~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~------------------~d~srVkaDi~- 153 (671)
T PF15390_consen 93 TTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVH------------------CDSSRVKADIK- 153 (671)
T ss_pred ccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeee------------------eCCceEEEecc-
Confidence 22222211 1111 12457799998888776665554555555 01122223333
Q ss_pred ccCcEEEEEEccCCCeEEEEc-CCceEEEEEccC
Q psy11036 187 HHKTVTSLCLASGGKRLISAS-LDHHAKIYEMVN 219 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~ 219 (239)
..+-|.|.+|.+||+.|+.+- ..=.-+|||-..
T Consensus 154 ~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 154 TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 367799999999999887653 334568898643
No 372
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.54 E-value=0.02 Score=42.80 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=103.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..+.++.|+| +.+.|++......-.|+=..+|+.+.+++ .-.....+.+..++++.++-. ++.+.++.+......+
T Consensus 86 ~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~ 164 (316)
T COG3204 86 ANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVI 164 (316)
T ss_pred ccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEE
Confidence 5699999999 56666665666666677777898888874 334456778887776666665 6888887776332211
Q ss_pred E---------EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccC
Q psy11036 120 H---------KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189 (239)
Q Consensus 120 ~---------~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~ 189 (239)
. .....+.....++|.|..+.|..+-+..-+.||.+. ....... .+- ....... .-.-.
T Consensus 165 ~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~------~~~---~~~~~~~--~~f~~ 233 (316)
T COG3204 165 SAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSV------HAS---LDPTADR--DLFVL 233 (316)
T ss_pred eccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccccc------ccc---cCccccc--ceEee
Confidence 1 111125577899999999989988888889888877 1101000 000 0000000 00123
Q ss_pred cEEEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 190 TVTSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 190 ~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
.|.++.|.+ .+.+|+-+.+++.+.-.|. .|+++..
T Consensus 234 DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~ 269 (316)
T COG3204 234 DVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIEL 269 (316)
T ss_pred ccccceecCCCCcEEEEecCCceEEEEec-CCCeeee
Confidence 467788887 4555566666777777766 3444433
No 373
>KOG1916|consensus
Probab=97.52 E-value=6.2e-05 Score=63.40 Aligned_cols=110 Identities=11% Similarity=0.144 Sum_probs=67.8
Q ss_pred CEEEEeeCC--CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCC
Q psy11036 8 LIVALWDIP--SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 8 g~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~ 84 (239)
|...||+++ .|+....+..+. ...+..+...|.-+-|-+ +.-++..+-.++++++.+..+... ..+ .|.
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~------~~p~gs~~~~V~wcp~~~-~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs 224 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTP------ITPYGSDPQLVSWCPIAV-NKVYICYGLKGGEIRLLNINRALR-SLFRSHS 224 (1283)
T ss_pred hhhheeehHhhccccccceEEee------cCcCCCCcceeeeccccc-ccceeeeccCCCceeEeeechHHH-HHHHhcC
Confidence 778889875 455444443332 122222224444444445 556777788889999888765433 222 477
Q ss_pred CCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 85 SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..+..+++-..|-..+.+ ++|||..+++.+.||.++.|.+.
T Consensus 225 ~~~~d~a~~~~g~~~l~~-------------------------------lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 225 QRVTDMAFFAEGVLKLAS-------------------------------LSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred CCcccHHHHhhchhhhee-------------------------------eCCCCcEEEEeecCCccceeeee
Confidence 777777765544222111 78899999999999998888765
No 374
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.32 E-value=0.038 Score=41.02 Aligned_cols=183 Identities=10% Similarity=0.037 Sum_probs=92.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC---ce---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD---PV--- 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---~~--- 78 (239)
...+.|.-++. +|+.++.+..... +..-.+++.. ++.++++.-.++.+.++++.... ..
T Consensus 41 d~~~~i~els~-~G~vlr~i~l~g~-------------~D~EgI~y~g-~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~ 105 (248)
T PF06977_consen 41 DEPGEIYELSL-DGKVLRRIPLDGF-------------GDYEGITYLG-NGRYVLSEERDQRLYIFTIDDDTTSLDRADV 105 (248)
T ss_dssp TTTTEEEEEET-T--EEEEEE-SS--------------SSEEEEEE-S-TTEEEEEETTTTEEEEEEE----TT--EEEE
T ss_pred CCCCEEEEEcC-CCCEEEEEeCCCC-------------CCceeEEEEC-CCEEEEEEcCCCcEEEEEEeccccccchhhc
Confidence 34577777776 4777776654321 5678888876 56666655568999999884322 11
Q ss_pred eee--c----CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC--CCeEEEEE--e------ccCCceEEEEEcCCC-CE
Q psy11036 79 MSV--N----HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG--GGKLLHKF--T------CHHKTVTSLCLASGG-KR 140 (239)
Q Consensus 79 ~~~--~----~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~--~~~~~~~~--~------~~~~~i~~i~~~~~~-~~ 140 (239)
..+ . ....+..++|+|.+..|+++. ..-..+|.++. ....+... . .....+.+++++|.. ++
T Consensus 106 ~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~l 185 (248)
T PF06977_consen 106 QKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHL 185 (248)
T ss_dssp EEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEE
T ss_pred eEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeE
Confidence 112 1 345689999999877777777 45566666652 12122111 1 123467889999954 56
Q ss_pred EEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 141 LISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
++....+..+..+|..++.+..+ .+.....- +...-..--.++|.++|++.+++ +-+..++|
T Consensus 186 liLS~es~~l~~~d~~G~~~~~~---------~L~~g~~g---l~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f 247 (248)
T PF06977_consen 186 LILSDESRLLLELDRQGRVVSSL---------SLDRGFHG---LSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF 247 (248)
T ss_dssp EEEETTTTEEEEE-TT--EEEEE---------E-STTGGG----SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred EEEECCCCeEEEECCCCCEEEEE---------EeCCcccC---cccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence 66677788888888664332222 11110000 00001235688999999765544 56655554
No 375
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.29 E-value=0.0014 Score=34.74 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=28.6
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
...|..++|+|....+|.++.+|.|.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4579999999999999999999999999886
No 376
>KOG2395|consensus
Probab=97.24 E-value=0.01 Score=47.80 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=91.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC------CCEEEEeeCCCeEEEEeCCCCCc-ee
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS------SDIVISGSYDKTVNVYDTRSPDP-VM 79 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~l~s~~~dg~v~vw~~~~~~~-~~ 79 (239)
...++-.|++.|+.+.+.+.+. + |.-+.+.|+. ...-+.|-.|..|.-||.+-... ..
T Consensus 355 ~~~l~klDIE~GKIVeEWk~~~--------------d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl 419 (644)
T KOG2395|consen 355 QDKLYKLDIERGKIVEEWKFED--------------D-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL 419 (644)
T ss_pred cCcceeeecccceeeeEeeccC--------------C-cceeeccCCcchhcccccccEEeecCCceEEecccccCccee
Confidence 3566677899999999998885 3 6666666631 12234467788899999873322 11
Q ss_pred ------eecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 80 ------SVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 80 ------~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
.+.......|.+-..+| ++++|+ +|.|++||-- ..+...-+++...+|..+..+.+|++++..+ +..+.+
T Consensus 420 ~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri-~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlL 496 (644)
T KOG2395|consen 420 AVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRI-GRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLL 496 (644)
T ss_pred eeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhh-hhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEE
Confidence 11234456677766666 555555 8999999974 5555566788889999999999999877654 667777
Q ss_pred EEcc
Q psy11036 153 YEMT 156 (239)
Q Consensus 153 ~d~~ 156 (239)
.++.
T Consensus 497 i~t~ 500 (644)
T KOG2395|consen 497 IDTL 500 (644)
T ss_pred EEEe
Confidence 7765
No 377
>KOG4499|consensus
Probab=97.22 E-value=0.044 Score=39.72 Aligned_cols=140 Identities=11% Similarity=0.109 Sum_probs=81.0
Q ss_pred CCCEEEEEEecCCcEEEEeC-C---------CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEE
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-G---------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKI 152 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~---------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~i 152 (239)
+.+.+.-..+|+|++++... + |.++.|-.. ++ +..+...-.--..++|+.+.+.+. +-+.+-.|.-
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~--h~-v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG--HQ-VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEeccC--CC-ceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 45667777899999954332 2 223333321 11 111221222335678877665544 4455667777
Q ss_pred EEcc--cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC-
Q psy11036 153 YEMT--LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP- 229 (239)
Q Consensus 153 ~d~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~- 229 (239)
||.+ +..+. ..-.++|++.. ++...+. .-.++...+|.+.+++-..++|...|..+|+.+.++..+
T Consensus 185 ~dyd~~tG~~s-----nr~~i~dlrk~-~~~e~~~-----PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt 253 (310)
T KOG4499|consen 185 YDYDCPTGDLS-----NRKVIFDLRKS-QPFESLE-----PDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPT 253 (310)
T ss_pred eecCCCccccc-----CcceeEEeccC-CCcCCCC-----CCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCC
Confidence 8754 11110 11234555442 1111111 123445667888888888899999999999999999955
Q ss_pred CCeeeeEe
Q psy11036 230 SPVLSIDV 237 (239)
Q Consensus 230 ~~v~~~~~ 237 (239)
..++++||
T Consensus 254 ~qitsccF 261 (310)
T KOG4499|consen 254 PQITSCCF 261 (310)
T ss_pred CceEEEEe
Confidence 47999988
No 378
>PHA02713 hypothetical protein; Provisional
Probab=97.15 E-value=0.033 Score=46.71 Aligned_cols=149 Identities=9% Similarity=0.109 Sum_probs=72.5
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeC-CC--------------------
Q psy11036 54 SSDIVISGSYDK-----TVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGG-GL-------------------- 105 (239)
Q Consensus 54 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~~-------------------- 105 (239)
++.+.+.||.++ ++..||..+.+.... +.....-.+++ .-++...+.|+ ++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~-~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~ 429 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC-VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH 429 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE-EECCEEEEEeCCCccccccccccccccccccccc
Confidence 577888888764 488899887654321 11111111122 22577777776 32
Q ss_pred ---cEEEEEccCCCeE--EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccC-C-C
Q psy11036 106 ---DVCIWDMLGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG-G-G 178 (239)
Q Consensus 106 ---~i~~~d~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~-~-~ 178 (239)
.+..||.. ..+- +..+.........+.+ +++..+.|+.++.-. ....+..||..+ + -
T Consensus 430 ~~~~ve~YDP~-td~W~~v~~m~~~r~~~~~~~~--~~~IYv~GG~~~~~~-------------~~~~ve~Ydp~~~~~W 493 (557)
T PHA02713 430 SSNKVIRYDTV-NNIWETLPNFWTGTIRPGVVSH--KDDIYVVCDIKDEKN-------------VKTCIFRYNTNTYNGW 493 (557)
T ss_pred ccceEEEECCC-CCeEeecCCCCcccccCcEEEE--CCEEEEEeCCCCCCc-------------cceeEEEecCCCCCCe
Confidence 36667776 2221 1111111111111222 456666666542100 001134455544 1 2
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCc--eEEEEEccCCe
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDH--HAKIYEMVNFS 221 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--~i~iwd~~~~~ 221 (239)
..+..+.........+++ +|++.++|+.|+ .+-.||..+.+
T Consensus 494 ~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 494 ELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred eEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccccc
Confidence 333333332333333333 688889999888 67778876644
No 379
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.15 E-value=0.042 Score=46.12 Aligned_cols=119 Identities=13% Similarity=0.219 Sum_probs=73.3
Q ss_pred CEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeEEEEEe-ccCCceEEEEEc--CCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 86 PVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLA--SGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~~~~~~-~~~~~i~~i~~~--~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
...-+.-+.-++..++..+ ..+.|||.+ .+....+-. ...+.|.++.|. |+++.+++.|..+.|.++.-. ..-.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~-~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTR-SGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcC-CcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence 3444445555555555554 679999998 444332222 457889999985 688999999999999998653 1111
Q ss_pred eeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.....-..++-.|+ ..|+ .+|.+..|.++|.+++.+ .+.+.|+|-
T Consensus 110 ~~~p~w~~i~~i~i----------~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 110 NKGPSWAPIRKIDI----------SSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred cCCcccceeEEEEe----------ecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 11111111222222 2333 679999999999877655 357888764
No 380
>KOG2444|consensus
Probab=97.09 E-value=0.0034 Score=44.93 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=59.9
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCcee-eec-CCCCEEEE-EEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-Cc
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVM-SVN-HGSPVESV-LCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-KT 128 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~-~~~~v~~~-~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-~~ 128 (239)
.+.-++.|+.+|.|.+|+........ .+. ....+-++ .--.++.+..++. ++.|+.|++. ..+.+.....|. .+
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~-p~k~~g~~g~h~~~~ 147 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIK-PNKVLGYVGQHNFES 147 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccc-cCceeeeeccccCCC
Confidence 45678899999999999986222111 111 12223222 2222344555555 8999999998 777776666666 44
Q ss_pred eEEEEEcCCCCEEEEE--ecCCeEEEEEcc
Q psy11036 129 VTSLCLASGGKRLISA--SLDHHAKIYEMT 156 (239)
Q Consensus 129 i~~i~~~~~~~~l~~~--~~d~~i~i~d~~ 156 (239)
+.....+..++.++.. +.|..++.|++.
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchh
Confidence 4444444444555555 555555555554
No 381
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.093 Score=40.36 Aligned_cols=140 Identities=14% Similarity=0.148 Sum_probs=81.8
Q ss_pred CeEEEEEecCCCCEEEEeeC-----------CCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--CCcEEE
Q psy11036 44 YVRAGTVSPVSSDIVISGSY-----------DKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--GLDVCI 109 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~-----------dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~ 109 (239)
..+.+...| ++.+-++... -|.|+.++. .+..++.+ .+-...+.++|+|+++.++.+. .+.|.-
T Consensus 112 r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r 189 (307)
T COG3386 112 RPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHR 189 (307)
T ss_pred CCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEE
Confidence 344666677 5555554333 133433343 34444444 3355567899999999888887 377888
Q ss_pred EEccC-CC-----eEEEEEeccCCceEEEEEcCCCCEEEEEecCC-eEEEEEcccceEeeeecceeEEEEEccCCCEEEE
Q psy11036 110 WDMLG-GG-----KLLHKFTCHHKTVTSLCLASGGKRLISASLDH-HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLH 182 (239)
Q Consensus 110 ~d~~~-~~-----~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 182 (239)
|++.. .. .....+....+..-.++...+|.+.+++..+| .|.+|+.+ ++++.
T Consensus 190 ~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd---------------------G~l~~ 248 (307)
T COG3386 190 YDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD---------------------GKLLG 248 (307)
T ss_pred EecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC---------------------CcEEE
Confidence 87751 11 11222223345556677777777765444443 77777765 55555
Q ss_pred EEecccCcEEEEEEcc-CCCeEEEE
Q psy11036 183 KFTCHHKTVTSLCLAS-GGKRLISA 206 (239)
Q Consensus 183 ~~~~h~~~v~~~~~s~-~~~~l~s~ 206 (239)
.+.-....+++++|-- +.+.|+..
T Consensus 249 ~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 249 EIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred EEECCCCCCccceEeCCCcCEEEEE
Confidence 5566657788888863 44544433
No 382
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.01 E-value=0.028 Score=44.78 Aligned_cols=110 Identities=14% Similarity=0.036 Sum_probs=69.9
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe--eeec------------ceeEEEEEccC--------CCEEEEEE
Q psy11036 128 TVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS--SFTG------------GLDVCIWDMLG--------GGKLLHKF 184 (239)
Q Consensus 128 ~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~--~~~~------------~~~i~~~d~~~--------~~~~~~~~ 184 (239)
.|+.+.|.++...|+++...|.|.||... .+... .... +..-.+-|+.. +-.+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58899999999999999999999999887 22221 1101 11233444432 23455566
Q ss_pred ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC---------CCCeeeeEec
Q psy11036 185 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY---------PSPVLSIDVS 238 (239)
Q Consensus 185 ~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---------~~~v~~~~~s 238 (239)
+...++|++++.| |=.++|.|..+|.+.|.|++....+..-.. ...++++.|+
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~ 144 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFS 144 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEE
Confidence 6678999999997 667999999999999999998888776431 2357777774
No 383
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.98 E-value=0.13 Score=43.32 Aligned_cols=107 Identities=13% Similarity=0.043 Sum_probs=63.5
Q ss_pred eEEEEEecCCCCEEEEeeCC------------CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEE---
Q psy11036 45 VRAGTVSPVSSDIVISGSYD------------KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCI--- 109 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~d------------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~--- 109 (239)
.+.-.|+| ++..+++.... +.+.+.++..+.... ...+.|..+.|+|||..++...++.|.+
T Consensus 399 ~t~PsWsp-DG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~g~v~Va~V 475 (591)
T PRK13616 399 LTRPSWSL-DADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIGGKVYLAVV 475 (591)
T ss_pred CCCceECC-CCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEECCEEEEEEE
Confidence 67888999 66655554322 233333444433322 3356799999999999998877777776
Q ss_pred EEccCCCe-EE---EEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 110 WDMLGGGK-LL---HKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 110 ~d~~~~~~-~~---~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
-... .+. .+ ..+. .-...+..+.|..++.+ +++..++...+|.+.
T Consensus 476 vr~~-~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L-~V~~~~~~~~v~~v~ 525 (591)
T PRK13616 476 EQTE-DGQYALTNPREVGPGLGDTAVSLDWRTGDSL-VVGRSDPEHPVWYVN 525 (591)
T ss_pred EeCC-CCceeecccEEeecccCCccccceEecCCEE-EEEecCCCCceEEEe
Confidence 3322 332 11 1122 22334688999988875 455555544455444
No 384
>KOG2280|consensus
Probab=96.97 E-value=0.03 Score=47.08 Aligned_cols=191 Identities=13% Similarity=0.083 Sum_probs=101.2
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee--ec---
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS--VN--- 82 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~--~~--- 82 (239)
-.|+|+++ +|+++..+.-.. +.+..+.|+. .+.|+.-..+|++.+|++-.. .+.. ++
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~--------------~~lI~mgWs~--~eeLI~v~k~g~v~Vy~~~ge-~ie~~svg~e~ 125 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKH--------------GELIGMGWSD--DEELICVQKDGTVHVYGLLGE-FIESNSVGFES 125 (829)
T ss_pred eeEEEEec-cccchHHHHhcC--------------CCeeeecccC--CceEEEEeccceEEEeecchh-hhccccccccc
Confidence 35778886 666666655544 6788999996 456666789999999998532 2222 21
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEec---cCCceEEEEEcCCCC---EEEEEe-cCCeEEEEEc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC---HHKTVTSLCLASGGK---RLISAS-LDHHAKIYEM 155 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~i~~~~~~~---~l~~~~-~d~~i~i~d~ 155 (239)
....|..+.+..+|-.+.+.++.-+.+-+.. .....+++. ...+-.+-...+++. .++-.. ..+ ..++..
T Consensus 126 ~~~~I~ec~~f~~GVavlt~~g~v~~i~~~~--~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~ 202 (829)
T KOG2280|consen 126 QMSDIVECRFFHNGVAVLTVSGQVILINGVE--EPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQV 202 (829)
T ss_pred ccCceeEEEEecCceEEEecCCcEEEEcCCC--cchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccce
Confidence 2344555666555644444333333333332 222233322 111112222222211 111111 000 001111
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCee
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVL 233 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~ 233 (239)
. ........+....+.+..+..||+.++|+--..+|.|.+-+....+.+..++ ...+..
T Consensus 203 ~-------------------~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~ 263 (829)
T KOG2280|consen 203 E-------------------ESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPK 263 (829)
T ss_pred e-------------------cccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchH
Confidence 0 0111112222223567889999999999999999999999888777777776 333444
Q ss_pred eeEec
Q psy11036 234 SIDVS 238 (239)
Q Consensus 234 ~~~~s 238 (239)
.|+|+
T Consensus 264 qm~Wc 268 (829)
T KOG2280|consen 264 QMAWC 268 (829)
T ss_pred hceee
Confidence 66663
No 385
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=96.90 E-value=0.16 Score=40.89 Aligned_cols=38 Identities=8% Similarity=0.137 Sum_probs=31.3
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee
Q psy11036 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
.+++..|+.||+++++|.-..+|.+.+.+.+ .+.+..+
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 4689999999999999999999999998877 4444444
No 386
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.86 E-value=0.091 Score=41.86 Aligned_cols=126 Identities=10% Similarity=0.042 Sum_probs=62.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCE-EEEeeCCCeEEEEe-CCCCCc----eee
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDI-VISGSYDKTVNVYD-TRSPDP----VMS 80 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~-l~s~~~dg~v~vw~-~~~~~~----~~~ 80 (239)
..+.+||+.+.+.++++.....- .....+.|..+ +..+ ++.+....+|-.|- .+.++. +..
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg~~g------------~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ 289 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLGEEG------------QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVID 289 (461)
T ss_dssp -EEEEEETTTTEEEEEEES-TTE------------EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEE
T ss_pred CeEEEEECCCCcEeeEEecCCCC------------CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEE
Confidence 58999999999999999876410 23445666542 2222 33333334444433 233321 111
Q ss_pred ec------------------CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEe---c-------------
Q psy11036 81 VN------------------HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFT---C------------- 124 (239)
Q Consensus 81 ~~------------------~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~---~------------- 124 (239)
+. .+.-++.|..|.|.++|.++. .|.++-||+.....+...-+ +
T Consensus 290 ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g 369 (461)
T PF05694_consen 290 IPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKG 369 (461)
T ss_dssp E--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS--
T ss_pred CCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccc
Confidence 21 134579999999999999998 79999999986554433221 1
Q ss_pred --cCCceEEEEEcCCCCEEEEEe
Q psy11036 125 --HHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 125 --~~~~i~~i~~~~~~~~l~~~~ 145 (239)
-.+...-+..|.||+.|....
T Consensus 370 ~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 370 KRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp ----S----EEE-TTSSEEEEE-
T ss_pred cccCCCCCeEEEccCCeEEEEEe
Confidence 112235677778887766543
No 387
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.84 E-value=0.29 Score=42.68 Aligned_cols=213 Identities=12% Similarity=0.094 Sum_probs=109.0
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEec---------------CCCCEEEEeeCCCeEEEE
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP---------------VSSDIVISGSYDKTVNVY 70 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~~~~l~s~~~dg~v~vw 70 (239)
.++.|+-.|.++|+.+..+........... ......+++.. ..+..++.++.|+.+.-.
T Consensus 202 ~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~------~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiAL 275 (764)
T TIGR03074 202 PHNKVIALDAATGKEKWKFDPKLKTEAGRQ------HQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIAL 275 (764)
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcccccc------cccccceEEecCCcccccccccccccccCCEEEEecCCCeEEEE
Confidence 357788889999998887765431000000 00011222221 134577888899999999
Q ss_pred eCCCCCceeeecCCCCEE-------------EEEEec--CCcEEEEeC-----------CCcEEEEEccCCCeEEEEEec
Q psy11036 71 DTRSPDPVMSVNHGSPVE-------------SVLCLP--SGGIFVTGG-----------GLDVCIWDMLGGGKLLHKFTC 124 (239)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~ 124 (239)
|.++++....+...+.+. .+.-.| .+..+++++ +|.|+-+|.+ +++.+-.+..
T Consensus 276 DA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~-TGkl~W~~~~ 354 (764)
T TIGR03074 276 DADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVN-TGALVWAWDP 354 (764)
T ss_pred ECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECC-CCcEeeEEec
Confidence 999999887764433321 111122 123444442 3679999998 7777665542
Q ss_pred cCCce------------------EEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 125 HHKTV------------------TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 125 ~~~~i------------------~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
-.... ..+++.++...+..+......-.|.-..... .-.-...+.-.|.++ ++..-.++.
T Consensus 355 g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~-~n~y~~slvALD~~T-Gk~~W~~Q~ 432 (764)
T TIGR03074 355 GNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPA-DEKYSSSLVALDATT-GKERWVFQT 432 (764)
T ss_pred CCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccC-cccccceEEEEeCCC-CceEEEecc
Confidence 11000 1122233222322222211111111100000 000122366667766 444444433
Q ss_pred ccCcE---------EEEEEcc-CCC---eEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 187 HHKTV---------TSLCLAS-GGK---RLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 187 h~~~v---------~~~~~s~-~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
..+.+ .-+.+.. +|+ .++.++.+|.+.++|.++|+++...+
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 11111 1122322 553 78899999999999999999988765
No 388
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.79 E-value=0.16 Score=38.98 Aligned_cols=149 Identities=13% Similarity=0.112 Sum_probs=75.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce-eeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~ 121 (239)
+.+..+.-++ ++.+++++.......-|+--...-. .......++..|.|.|++.+.+++..|.|+.=+.....+....
T Consensus 145 gs~~~~~r~~-dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~ 223 (302)
T PF14870_consen 145 GSINDITRSS-DGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSE 223 (302)
T ss_dssp --EEEEEE-T-TS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE--
T ss_pred ceeEeEEECC-CCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCcccccc
Confidence 6788888888 7888888766555556764322221 1224578999999999999888887888888773212222222
Q ss_pred --Ee--ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe---cccCcEEEE
Q psy11036 122 --FT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT---CHHKTVTSL 194 (239)
Q Consensus 122 --~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~h~~~v~~~ 194 (239)
.. ...-.+..++|.+++...++|+. |.+.. ..+ .++.-.... .-...+..+
T Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l~~-S~D--------------------gGktW~~~~~~~~~~~n~~~i 281 (302)
T PF14870_consen 224 PIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTLLV-STD--------------------GGKTWQKDRVGENVPSNLYRI 281 (302)
T ss_dssp -B-TTSS--S-EEEEEESSSS-EEEEEST-T-EEE-ESS--------------------TTSS-EE-GGGTTSSS---EE
T ss_pred ccCCcccCceeeEEEEecCCCCEEEEeCC-ccEEE-eCC--------------------CCccceECccccCCCCceEEE
Confidence 11 12234789999988777776654 43322 222 122111111 123457788
Q ss_pred EEccCCCeEEEEcCCceEEEE
Q psy11036 195 CLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iw 215 (239)
.|.++.+-++. +.+|.|.-|
T Consensus 282 ~f~~~~~gf~l-G~~G~ll~~ 301 (302)
T PF14870_consen 282 VFVNPDKGFVL-GQDGVLLRY 301 (302)
T ss_dssp EEEETTEEEEE--STTEEEEE
T ss_pred EEcCCCceEEE-CCCcEEEEe
Confidence 88766555554 467877654
No 389
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.73 E-value=0.074 Score=43.03 Aligned_cols=142 Identities=13% Similarity=0.140 Sum_probs=91.8
Q ss_pred CCCEEE-EeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecC--------CcEEEEeCCCcEEEEEccCCCeEEEEEec
Q psy11036 54 SSDIVI-SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPS--------GGIFVTGGGLDVCIWDMLGGGKLLHKFTC 124 (239)
Q Consensus 54 ~~~~l~-s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~l~~~~~~~i~~~d~~~~~~~~~~~~~ 124 (239)
+..+|. .|+....+.-.|++.|+.+........+ -+.|.|. .+.|+..++..|.-.|.+..+..+....
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e- 555 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE- 555 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee-
Confidence 444444 4555567777888888888877655555 5677764 3456666677788788886664443332
Q ss_pred cCCceEEEEEcC----CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 125 HHKTVTSLCLAS----GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 125 ~~~~i~~i~~~~----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
.....+.-.|+. ...++|+++..|.|++||-- +......+.+-..+|..+..+.+|
T Consensus 556 sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRi--------------------g~rAKtalP~lG~aIk~idvta~G 615 (776)
T COG5167 556 SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRI--------------------GKRAKTALPGLGDAIKHIDVTANG 615 (776)
T ss_pred ehhccccccccccccccCceEEEecCCCceeeehhh--------------------cchhhhcCcccccceeeeEeecCC
Confidence 122223333332 45689999999999999865 222223345556789999999999
Q ss_pred CeEEEEcCCceEEEEEcc
Q psy11036 201 KRLISASLDHHAKIYEMV 218 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~ 218 (239)
+++++.+. ..+.+-|+.
T Consensus 616 k~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 616 KHILATCK-NYLLLTDVP 632 (776)
T ss_pred cEEEEeec-ceEEEEecc
Confidence 98876664 466666653
No 390
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=96.72 E-value=0.13 Score=36.99 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=72.5
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEcc-CCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC------eEEEE-Ecc-
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDML-GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH------HAKIY-EMT- 156 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~------~i~i~-d~~- 156 (239)
....++..+.+.++++++...|.+|++. ...++..++..- +.|..+.++..|+++++--++. .+|+| +.+
T Consensus 19 EP~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~ 97 (215)
T PF14761_consen 19 EPTAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRS 97 (215)
T ss_pred CcceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhh
Confidence 3444444444455555667889999997 345566677654 7889999999999999965432 45554 222
Q ss_pred ----cceEe-eeecceeEEEEEcc--CCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCC
Q psy11036 157 ----LKTVS-SFTGGLDVCIWDML--GGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 157 ----~~~~~-~~~~~~~i~~~d~~--~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
...+. .+.|.. +.--..+ ...-.+-++.- ..++.+++..| .|++++ |+ ++++.+|.+...
T Consensus 98 ~~~~~~~v~vRiaG~~-v~~~~~~~~~~qleiiElPl-~~~p~ciaCC~~tG~LlV-g~-~~~l~lf~l~~~ 165 (215)
T PF14761_consen 98 QKEENSPVRVRIAGHR-VTPSFNESSKDQLEIIELPL-SEPPLCIACCPVTGNLLV-GC-GNKLVLFTLKYQ 165 (215)
T ss_pred hcccCCcEEEEEcccc-cccCCCCccccceEEEEecC-CCCCCEEEecCCCCCEEE-Ec-CCEEEEEEEEEE
Confidence 11111 111110 0000000 00112223332 55678888888 455544 54 568889987543
No 391
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=96.71 E-value=0.083 Score=34.79 Aligned_cols=106 Identities=8% Similarity=0.107 Sum_probs=70.1
Q ss_pred EEEecCCCCEEEEeeCCCeEEEEeCCC--------CCceeeecCCCCEEEEEEec-----CCcEEEEeCCCcEEEEEccC
Q psy11036 48 GTVSPVSSDIVISGSYDKTVNVYDTRS--------PDPVMSVNHGSPVESVLCLP-----SGGIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 48 ~~~~~~~~~~l~s~~~dg~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~i~~~d~~~ 114 (239)
-.|.. ....|+.++.-|.|.|++... ...+..+.....|++++--+ ....|+.|+...+..||+..
T Consensus 4 GkfDG-~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~ 82 (136)
T PF14781_consen 4 GKFDG-VHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVEN 82 (136)
T ss_pred EEeCC-CceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEccc
Confidence 34554 345677778888999998653 23455667778888887654 35688888999999999985
Q ss_pred CCeEEEEEeccCCceEEEEEcC---CCCEEEEEecCCeEEEEEcc
Q psy11036 115 GGKLLHKFTCHHKTVTSLCLAS---GGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 115 ~~~~~~~~~~~~~~i~~i~~~~---~~~~l~~~~~d~~i~i~d~~ 156 (239)
......+ .-...+.++.+-. ...-++..+.+..|.-||.+
T Consensus 83 N~d~Fyk--e~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~ 125 (136)
T PF14781_consen 83 NSDLFYK--EVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYE 125 (136)
T ss_pred Cchhhhh--hCccceeEEEEEecCCCCCcEEEECceEEEEEeCCC
Confidence 5444432 2346677777633 22345555556777777776
No 392
>KOG4441|consensus
Probab=96.54 E-value=0.35 Score=40.80 Aligned_cols=149 Identities=17% Similarity=0.220 Sum_probs=76.7
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCCCceeeecCCCCEEEEEE-ecCCcEEEEeC-C------CcEEEEEccCCC-eEE
Q psy11036 54 SSDIVISGSYDK-----TVNVYDTRSPDPVMSVNHGSPVESVLC-LPSGGIFVTGG-G------LDVCIWDMLGGG-KLL 119 (239)
Q Consensus 54 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~-~------~~i~~~d~~~~~-~~~ 119 (239)
++.+.++|+.|| ++..||..+.+....-....+...... .-+|...++|+ + .++..||..... ..+
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~ 459 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI 459 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence 688999999996 477888877654333222222222222 23677777777 3 347788886221 122
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCE-EEEEEecccCcEEEEEEcc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~h~~~v~~~~~s~ 198 (239)
..+..-........+ ++...+.||.|+.-.+ ..+..||..+..- .+..+......+.....
T Consensus 460 ~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~--------------~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~-- 521 (571)
T KOG4441|consen 460 APMNTRRSGFGVAVL--NGKIYVVGGFDGTSAL--------------SSVERYDPETNQWTMVAPMTSPRSAVGVVVL-- 521 (571)
T ss_pred CCcccccccceEEEE--CCEEEEECCccCCCcc--------------ceEEEEcCCCCceeEcccCccccccccEEEE--
Confidence 222222222222222 6778888888772110 0133344433222 12222222333322333
Q ss_pred CCCeEEEEcCCc-----eEEEEEccCC
Q psy11036 199 GGKRLISASLDH-----HAKIYEMVNF 220 (239)
Q Consensus 199 ~~~~l~s~s~d~-----~i~iwd~~~~ 220 (239)
+++..+.|+.|| +|..||..+.
T Consensus 522 ~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 522 GGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred CCEEEEEecccCccccceeEEcCCCCC
Confidence 577788888876 4777777654
No 393
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.50 E-value=0.31 Score=38.71 Aligned_cols=161 Identities=16% Similarity=0.104 Sum_probs=81.0
Q ss_pred CCeEEEEEecCCCCEEEEee-----------CCC-eEEEEeCCC--CCc--eeee-cCCCCEEEEEEecCCcEEEEeCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGS-----------YDK-TVNVYDTRS--PDP--VMSV-NHGSPVESVLCLPSGGIFVTGGGL 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~-----------~dg-~v~vw~~~~--~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~~ 105 (239)
.....++|.+ +++++++-. ..+ .|.+++-.+ ++. ...+ ........+++.+++ ++ ++...
T Consensus 14 ~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-ly-V~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VY-VATPP 90 (367)
T ss_pred CCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EE-EeCCC
Confidence 5567899999 788777642 223 677776543 332 2333 334456889999988 44 44444
Q ss_pred cEEEE-EccCCC----e---EEEEEec----cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc-eEeeeecceeEEEE
Q psy11036 106 DVCIW-DMLGGG----K---LLHKFTC----HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-TVSSFTGGLDVCIW 172 (239)
Q Consensus 106 ~i~~~-d~~~~~----~---~~~~~~~----~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~i~~~ 172 (239)
.|..+ |....+ + .+..+.. +......++|.|||.+.++-+..+.-.. ..... ........+.+..+
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~-~~~~~~~~~~~~~~g~i~r~ 169 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKV-TRPGTSDESRQGLGGGLFRY 169 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCcee-ccCCCccCcccccCceEEEE
Confidence 45434 443111 1 1122322 1244678999999987665553221110 00000 00000111234444
Q ss_pred EccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC
Q psy11036 173 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 173 d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 209 (239)
+..+. +......++ .....++|+|+|+++++-..+
T Consensus 170 ~pdg~-~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 170 NPDGG-KLRVVAHGF-QNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred ecCCC-eEEEEecCc-CCCccceECCCCCEEEEccCC
Confidence 44332 222122232 335688999999988765433
No 394
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.47 E-value=0.33 Score=41.93 Aligned_cols=72 Identities=13% Similarity=0.201 Sum_probs=44.8
Q ss_pred CCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe--------------------ccCCceEEEEEcCC---CCEE
Q psy11036 85 SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT--------------------CHHKTVTSLCLASG---GKRL 141 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~--------------------~~~~~i~~i~~~~~---~~~l 141 (239)
-.|..+..+|+|+.++..|...|.|..+....-.-..+. .+...|..+.|+|. +.+|
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 468889999999999999987777777642110001111 12335666666664 3566
Q ss_pred EEEecCCeEEEEEcc
Q psy11036 142 ISASLDHHAKIYEMT 156 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~ 156 (239)
++-..|+++++||+.
T Consensus 165 ~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 165 VVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEecCCEEEEEecC
Confidence 666666666666654
No 395
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.47 E-value=0.19 Score=37.87 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=78.0
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEecc-CCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
....+.++.|+|+.+.|++..+.--.+-.+...++.+.++.-. -.....|.+..++++.++--.++.+.++.+. ...+
T Consensus 84 ~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~ 163 (316)
T COG3204 84 ETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTV 163 (316)
T ss_pred ccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccE
Confidence 4455999999999999998886444444444478888887621 2234567788788888887788999888877 2222
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
... ....-++......+.....++|.|..+.|+.+-+-.=+.||...
T Consensus 164 ~~~-----------~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 164 ISA-----------KVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred Eec-----------cceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 222 00001111111114456677888877777767666666666554
No 396
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.46 E-value=0.35 Score=38.88 Aligned_cols=145 Identities=17% Similarity=0.224 Sum_probs=88.4
Q ss_pred cCCCCEEEEeeCCCeEEEEeCCCCC-----ceeeecCCCCEEEEEEec-----CCcEEEEeCCCcEEEEEccCCC-----
Q psy11036 52 PVSSDIVISGSYDKTVNVYDTRSPD-----PVMSVNHGSPVESVLCLP-----SGGIFVTGGGLDVCIWDMLGGG----- 116 (239)
Q Consensus 52 ~~~~~~l~s~~~dg~v~vw~~~~~~-----~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~i~~~d~~~~~----- 116 (239)
+++...+++|+..|.++||+..... .+.....+.+|..+..-+ +...|++-.-..+.+|.+....
T Consensus 34 ~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 34 PSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEH 113 (418)
T ss_pred CCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCccc
Confidence 3356799999999999999986443 122225678888887643 3446666667888888884211
Q ss_pred ---eEEEEEeccCC--ceEEEEEcC----C-CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 117 ---KLLHKFTCHHK--TVTSLCLAS----G-GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 117 ---~~~~~~~~~~~--~i~~i~~~~----~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
-.+..+..|.- ....++.-| . ..++++-+.||.+.+|+-+.-.. ...+..
T Consensus 114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f--------------------~~~lp~ 173 (418)
T PF14727_consen 114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAF--------------------SRFLPD 173 (418)
T ss_pred CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEE--------------------EEEcCC
Confidence 12233333432 233344333 2 25788899999999998661111 111111
Q ss_pred ccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.--..-++|.+.-..+++++.+..+.-|..
T Consensus 174 -~llPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 174 -FLLPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred -CCCCcCeEEeecCCEEEEecCceeEEEecH
Confidence 111224577777778888888877777765
No 397
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.43 E-value=0.37 Score=38.88 Aligned_cols=182 Identities=10% Similarity=0.109 Sum_probs=90.8
Q ss_pred CEEEEeeCCCcceeee-eeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-----------CCeEEEEeCCCC
Q psy11036 8 LIVALWDIPSEAQVST-FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-----------DKTVNVYDTRSP 75 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----------dg~v~vw~~~~~ 75 (239)
..+++.|+++++.+.. +.... ...+.|.+ +++.|+.... ...|+.|.+.+.
T Consensus 150 ~~l~v~Dl~tg~~l~d~i~~~~----------------~~~~~W~~-d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~ 212 (414)
T PF02897_consen 150 YTLRVFDLETGKFLPDGIENPK----------------FSSVSWSD-DGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTP 212 (414)
T ss_dssp EEEEEEETTTTEEEEEEEEEEE----------------SEEEEECT-TSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-
T ss_pred EEEEEEECCCCcCcCCcccccc----------------cceEEEeC-CCCEEEEEEeCcccccccCCCCcEEEEEECCCC
Confidence 5799999999976543 22221 22499999 5555443332 224788888776
Q ss_pred Cce--eeec--CCCC-EEEEEEecCCcEEEEeC----C-CcEEEEEccCC---CeEEEEEeccCCceEEEEEcCCCCEEE
Q psy11036 76 DPV--MSVN--HGSP-VESVLCLPSGGIFVTGG----G-LDVCIWDMLGG---GKLLHKFTCHHKTVTSLCLASGGKRLI 142 (239)
Q Consensus 76 ~~~--~~~~--~~~~-v~~~~~~~~~~~l~~~~----~-~~i~~~d~~~~---~~~~~~~~~~~~~i~~i~~~~~~~~l~ 142 (239)
... ..+. ...- ...+..++++++++... + ..+.+.++... ......+......+....-+..+.+++
T Consensus 213 ~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi 292 (414)
T PF02897_consen 213 QSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYI 292 (414)
T ss_dssp GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEE
T ss_pred hHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEE
Confidence 543 3332 2233 67888999999887654 3 45777787632 233444443444443333222333333
Q ss_pred EEec---CCeEEEEEcccceEeeeecceeEEEEEccCCC--EEEEEEecccC--cEEEEEEccCCCeE-EEEcCCc--eE
Q psy11036 143 SASL---DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG--KLLHKFTCHHK--TVTSLCLASGGKRL-ISASLDH--HA 212 (239)
Q Consensus 143 ~~~~---d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~h~~--~v~~~~~s~~~~~l-~s~s~d~--~i 212 (239)
.... .+.|.-.++. ... .....+..+.. .+..+.. .+.+| +....++ .|
T Consensus 293 ~Tn~~a~~~~l~~~~l~-------------------~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l 351 (414)
T PF02897_consen 293 LTNDDAPNGRLVAVDLA-------------------DPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRL 351 (414)
T ss_dssp EE-TT-TT-EEEEEETT-------------------STSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEE
T ss_pred eeCCCCCCcEEEEeccc-------------------ccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEE
Confidence 3322 2334333433 211 11223344444 3444443 34444 4444443 58
Q ss_pred EEEEccCCeeeEEec
Q psy11036 213 KIYEMVNFSPVHTLD 227 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~ 227 (239)
+++++..+.....+.
T Consensus 352 ~v~~~~~~~~~~~~~ 366 (414)
T PF02897_consen 352 RVYDLDDGKESREIP 366 (414)
T ss_dssp EEEETT-TEEEEEEE
T ss_pred EEEECCCCcEEeeec
Confidence 888887455555554
No 398
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.43 E-value=0.45 Score=39.78 Aligned_cols=222 Identities=12% Similarity=0.087 Sum_probs=115.2
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeec-----------------cceeeccCCCCCeE-EEEEecCCCCEEEEeeC----
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYK-----------------VPLMLYSTPQDYVR-AGTVSPVSSDIVISGSY---- 63 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~---- 63 (239)
.+|.|+.+|.++|+.+..+..-..... .+...+...-..+. .+++.| ...++..+..
T Consensus 179 ~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~-~~~lvy~~tGnp~p 257 (527)
T TIGR03075 179 VRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDP-ETNLIYFGTGNPSP 257 (527)
T ss_pred CCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcC-CCCeEEEeCCCCCC
Confidence 468999999999998876644211000 00000000011121 346666 4445544431
Q ss_pred -CC-----------eEEEEeCCCCCceeeec---CC-------CCEEEEEEecCCc---EEEEeC-CCcEEEEEccCCCe
Q psy11036 64 -DK-----------TVNVYDTRSPDPVMSVN---HG-------SPVESVLCLPSGG---IFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 64 -dg-----------~v~vw~~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~-~~~i~~~d~~~~~~ 117 (239)
++ .|.-.|+++++....++ |. ....-+....+|+ .++.+. +|.+.+.|-+ +++
T Consensus 258 ~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~-tG~ 336 (527)
T TIGR03075 258 WNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRT-NGK 336 (527)
T ss_pred CCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECC-CCc
Confidence 12 57778899998876653 21 1222223334665 555666 7999999987 666
Q ss_pred EEEEEe--c----------cC-Cce----------------------------EEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 118 LLHKFT--C----------HH-KTV----------------------------TSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 118 ~~~~~~--~----------~~-~~i----------------------------~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+...+ . .. .++ ..++++|+..++.....+....++.-.
T Consensus 337 ~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~ 416 (527)
T TIGR03075 337 LLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEK 416 (527)
T ss_pred eeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccc
Confidence 652110 0 00 000 125566666666666555433322110
Q ss_pred c-----ceEee-----e----ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 157 L-----KTVSS-----F----TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 157 ~-----~~~~~-----~----~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
. ..... . ...+.+.-+|+.+. +..-..+......... +.-.+.+++.++.||.++.+|.++|++
T Consensus 417 ~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tG-k~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~ 494 (527)
T TIGR03075 417 VSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITG-KIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEE 494 (527)
T ss_pred cccCCCCceeccccccCCCCCCCceeEEEEeCCCC-ceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCE
Confidence 0 00000 0 11344778888774 3333332211111111 122456777888899999999999999
Q ss_pred eEEecCCCC
Q psy11036 223 VHTLDYPSP 231 (239)
Q Consensus 223 ~~~~~~~~~ 231 (239)
+.+++..+.
T Consensus 495 lw~~~~g~~ 503 (527)
T TIGR03075 495 LWKFKTGSG 503 (527)
T ss_pred eEEEeCCCC
Confidence 998885543
No 399
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.42 E-value=0.094 Score=39.25 Aligned_cols=114 Identities=13% Similarity=0.130 Sum_probs=71.2
Q ss_pred CCceeeecCCCCEEEEEEecCCcE-EEEeC-CCc-EEEEEccCCCeEEEEEeccCCc--eEEEEEcCCCCEEEEEecC--
Q psy11036 75 PDPVMSVNHGSPVESVLCLPSGGI-FVTGG-GLD-VCIWDMLGGGKLLHKFTCHHKT--VTSLCLASGGKRLISASLD-- 147 (239)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-~~~-i~~~d~~~~~~~~~~~~~~~~~--i~~i~~~~~~~~l~~~~~d-- 147 (239)
++.+...........|+++|.... ++.+- -|+ ..++|.. ..+....+...++. --.=.|+|||++|...-.|
T Consensus 58 Gk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~-~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd 136 (366)
T COG3490 58 GKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPN-GAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFD 136 (366)
T ss_pred CceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCC-CCcCcEEEecccCceeecccccCCCCcEEEeecCCCC
Confidence 445555555566667888886544 33343 244 5688887 44444444332221 1123589999998876544
Q ss_pred ---CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC
Q psy11036 148 ---HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 148 ---~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
|.|-|||.+ ...+.+.++..|.-.-..+.+.+||+.|+.+..
T Consensus 137 ~~rGViGvYd~r-------------------~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 137 PNRGVIGVYDAR-------------------EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred CCCceEEEEecc-------------------cccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 445555544 445666667778777888999999999887643
No 400
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.40 E-value=0.39 Score=40.60 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=71.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee--ecCCCCEEEEEEe--cCCcEEEEeC-CCcEEEEEcc----
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS--VNHGSPVESVLCL--PSGGIFVTGG-GLDVCIWDML---- 113 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~--~~~~~l~~~~-~~~i~~~d~~---- 113 (239)
....-+.-+. -+...++-+...++.|||.+.+..... +...+.|.++.|. |+++.+++.+ .+.|.+|--.
T Consensus 30 ~~~~li~gss-~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy 108 (631)
T PF12234_consen 30 SNPSLISGSS-IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY 108 (631)
T ss_pred CCcceEeecc-cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence 4444555554 344555555556899999988764433 3458899999986 5777777666 8888887431
Q ss_pred -C---CCeEEEEE--eccC-CceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 114 -G---GGKLLHKF--TCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 114 -~---~~~~~~~~--~~~~-~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
. ...+++++ ..|+ .+|.+..|.++|..++.+ ++.+.|+|-.
T Consensus 109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~ 156 (631)
T PF12234_consen 109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW 156 (631)
T ss_pred hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence 1 11233332 3344 589999999998766554 5678887654
No 401
>PHA03098 kelch-like protein; Provisional
Probab=96.39 E-value=0.48 Score=39.71 Aligned_cols=59 Identities=17% Similarity=0.135 Sum_probs=33.1
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-C------CcEEEEEcc
Q psy11036 54 SSDIVISGSYD-----KTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-G------LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~------~~i~~~d~~ 113 (239)
++.+++.||.+ ..+..||..+++....- .....-.+++ .-++...+.|+ + ..+..||+.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~ 414 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLN 414 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCC
Confidence 56777888765 35778888776543221 1111111222 23566777666 1 347788886
No 402
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.39 E-value=0.027 Score=28.98 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=27.1
Q ss_pred CCeEEEEEecCCC--CEEEEeeCCCeEEEEeCCCC
Q psy11036 43 DYVRAGTVSPVSS--DIVISGSYDKTVNVYDTRSP 75 (239)
Q Consensus 43 ~~v~~~~~~~~~~--~~l~s~~~dg~v~vw~~~~~ 75 (239)
+.|.+++|+|..+ ++|+.+-.-|.|.++|+++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 3589999998555 68888888899999999853
No 403
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=96.35 E-value=0.032 Score=28.54 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=32.1
Q ss_pred cCCCeEEEE-cCCceEEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 198 SGGKRLISA-SLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 198 ~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
|++++|+++ -.++.|.++|..+++.+.++........++|+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~~ 42 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAVS 42 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEeC
Confidence 567766554 46889999999999999999876667777764
No 404
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.33 E-value=0.055 Score=39.46 Aligned_cols=60 Identities=12% Similarity=0.097 Sum_probs=44.9
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeee---------------cCCCCEEEEEEecCCcEEEEeCCCcEEEEEcc
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV---------------NHGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~ 113 (239)
.+++|++-+.+|.+++||+.+++.+..- .....|..+..+.+|.-+++-++|..+.|+..
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~ 95 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD 95 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence 5778999999999999999988654322 13356777777777877777777777777764
No 405
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.29 E-value=0.43 Score=38.21 Aligned_cols=137 Identities=14% Similarity=0.181 Sum_probs=69.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee--------------------CCCeE
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS--------------------YDKTV 67 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--------------------~dg~v 67 (239)
|.+.++|-++.+......... .....-...-|.| ..+.++|.. ...++
T Consensus 157 Ggf~llD~~tf~v~g~We~~~-----------~~~~~gYDfw~qp-r~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l 224 (461)
T PF05694_consen 157 GGFVLLDGETFEVKGRWEKDR-----------GPQPFGYDFWYQP-RHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSL 224 (461)
T ss_dssp -EEEEE-TTT--EEEE--SB------------TT------EEEET-TTTEEEE-B---HHHHTT---TTTHHHH-S--EE
T ss_pred CcEEEEcCccccccceeccCC-----------CCCCCCCCeEEcC-CCCEEEEeccCChhhcccCCChhHhhcccccCeE
Confidence 567777777776666554432 0013456778888 677888742 23589
Q ss_pred EEEeCCCCCceeeecCC---CCEEEEEEec--CCcEEEEeC--CCcEEEEEccCCCe----EEEEEecc-----------
Q psy11036 68 NVYDTRSPDPVMSVNHG---SPVESVLCLP--SGGIFVTGG--GLDVCIWDMLGGGK----LLHKFTCH----------- 125 (239)
Q Consensus 68 ~vw~~~~~~~~~~~~~~---~~v~~~~~~~--~~~~l~~~~--~~~i~~~d~~~~~~----~~~~~~~~----------- 125 (239)
.+||+.+.+.++++... .....+.|.. +..+-+++. ..+|..|--...++ .+..+...
T Consensus 225 ~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml 304 (461)
T PF05694_consen 225 HVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEML 304 (461)
T ss_dssp EEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGG
T ss_pred EEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccc
Confidence 99999999999888433 3456777764 445555554 55555543321332 22222111
Q ss_pred ------CCceEEEEEcCCCCEEEEEe-cCCeEEEEEcc
Q psy11036 126 ------HKTVTSLCLASGGKRLISAS-LDHHAKIYEMT 156 (239)
Q Consensus 126 ------~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~ 156 (239)
..-|+.|..|.|.++|.... .+|.|+.||+.
T Consensus 305 ~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDIS 342 (461)
T PF05694_consen 305 KPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDIS 342 (461)
T ss_dssp GGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-S
T ss_pred cccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecC
Confidence 24579999999999887665 58999999987
No 406
>KOG3630|consensus
Probab=96.28 E-value=0.037 Score=48.73 Aligned_cols=144 Identities=13% Similarity=0.033 Sum_probs=87.0
Q ss_pred CCeEEEEEecCCCCEEE--EeeCCCeEEEEeCCCCCcee----e-e-------cCCCCEEEEEEecCCcEEEEe--CCCc
Q psy11036 43 DYVRAGTVSPVSSDIVI--SGSYDKTVNVYDTRSPDPVM----S-V-------NHGSPVESVLCLPSGGIFVTG--GGLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~--s~~~dg~v~vw~~~~~~~~~----~-~-------~~~~~v~~~~~~~~~~~l~~~--~~~~ 106 (239)
-++..+...+ +....+ ..+.+-.|..||+++-..-. . + ....-..++.|.|.-....+. .|+.
T Consensus 101 ~pi~~~v~~~-D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls 179 (1405)
T KOG3630|consen 101 IPIVIFVCFH-DATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS 179 (1405)
T ss_pred ccceEEEecc-CCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence 4555666666 444333 33344578899987542211 0 1 233455678898864443333 3788
Q ss_pred EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 107 i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
|.+..+....+....+. .....++++|+|.|+.++.|-..|++.-|....+....+. ..+..
T Consensus 180 l~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip-------------~Pp~~---- 241 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIP-------------EPPVE---- 241 (1405)
T ss_pred hhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecccceeeccc-------------CCCcC----
Confidence 88887764444444433 4567899999999999999999999988876633322220 11110
Q ss_pred ccCcEEEEEEccCCCeEEE
Q psy11036 187 HHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s 205 (239)
....|.+++|-....++++
T Consensus 242 e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 242 ENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred CCcceeEEEEecceeEEEE
Confidence 1356778888766666554
No 407
>KOG2377|consensus
Probab=96.27 E-value=0.081 Score=42.21 Aligned_cols=121 Identities=11% Similarity=0.125 Sum_probs=84.4
Q ss_pred cceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--c---CCCCEEEEEEecCCcEEEEeCCCcE
Q psy11036 33 VPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--N---HGSPVESVLCLPSGGIFVTGGGLDV 107 (239)
Q Consensus 33 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~l~~~~~~~i 107 (239)
+|+..-..++++|.++.|++ +++.|+.--.+.+|.+.+....+..... . ....|....|..+ .-++...+..+
T Consensus 57 VpiSfdm~d~G~I~SIkFSl-DnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G~ 134 (657)
T KOG2377|consen 57 VPISFDMDDKGEIKSIKFSL-DNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQGI 134 (657)
T ss_pred CCceeeecCCCceeEEEecc-CcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCCe
Confidence 45544455668999999999 8999999999999999998544433332 1 2345888899876 55666666667
Q ss_pred EEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe--cCCeEEEEEc
Q psy11036 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS--LDHHAKIYEM 155 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~--~d~~i~i~d~ 155 (239)
.+|-.......++..+.|+..|.-..|.++-+.++.++ ..+++.=+.+
T Consensus 135 e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~ 184 (657)
T KOG2377|consen 135 EFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHF 184 (657)
T ss_pred EEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEE
Confidence 77776645666777788888999999999876544333 3444433333
No 408
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.12 E-value=0.52 Score=37.45 Aligned_cols=108 Identities=23% Similarity=0.267 Sum_probs=56.4
Q ss_pred CCEEEEEEecCCcEEEEeC------------CC-cEEEEEcc-CCCe--EEEEEeccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 85 SPVESVLCLPSGGIFVTGG------------GL-DVCIWDML-GGGK--LLHKFTCHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~------------~~-~i~~~d~~-~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
.....|+|.++|+++++-. .+ .|.+++-. ..++ ....+.........+++.++| .++ +....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence 4567888999998887742 22 56666543 1222 233443334456889998888 444 44443
Q ss_pred eEEEEEcccceEeeeecceeEEEEEccCCCE-EEEEEec----ccCcEEEEEEccCCCeEEEEc
Q psy11036 149 HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK-LLHKFTC----HHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~----h~~~v~~~~~s~~~~~l~s~s 207 (239)
..++.|..+..... + ..+ .+..+.. +......++|.|||.+.++-+
T Consensus 92 i~~~~d~~gdg~ad--~-----------~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 92 ILFLRDKDGDDKAD--G-----------EREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEEeCCCCCCCCC--C-----------ccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 33333443110000 0 011 1111211 234577889999998776554
No 409
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.97 E-value=0.66 Score=37.44 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=63.8
Q ss_pred eEEEEEecCCCCEEEEe-eCCC----eEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-C---C------c--
Q psy11036 45 VRAGTVSPVSSDIVISG-SYDK----TVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-G---L------D-- 106 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~-~~dg----~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~---~------~-- 106 (239)
+....++| ++++++.+ +..| .++++|+++++.+... ... ....+.|.++++.++... + . .
T Consensus 126 ~~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 33578889 67766643 3334 6999999999765432 211 122399999988776554 2 1 2
Q ss_pred EEEEEccCCCeE-EEEEeccCCc--eEEEEEcCCCCEEEEEecC----CeEEEEEcc
Q psy11036 107 VCIWDMLGGGKL-LHKFTCHHKT--VTSLCLASGGKRLISASLD----HHAKIYEMT 156 (239)
Q Consensus 107 i~~~d~~~~~~~-~~~~~~~~~~--i~~i~~~~~~~~l~~~~~d----~~i~i~d~~ 156 (239)
|..|.+...... ...+...... ...+..++++++++..... ..+.+.++.
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~ 260 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLD 260 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECC
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecc
Confidence 666776532221 2333333332 5678889999987764433 235555554
No 410
>PHA02713 hypothetical protein; Provisional
Probab=95.93 E-value=0.87 Score=38.43 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCCEEEEeeCC------CeEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCCeEE
Q psy11036 54 SSDIVISGSYD------KTVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGGKLL 119 (239)
Q Consensus 54 ~~~~l~s~~~d------g~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~~~~ 119 (239)
++.+++.||.+ ..+..||..+.+.... +.....-.+++ .-+++..+.|+ + ..+..||.. ..+ -
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~-~~~-W 379 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA-VIDDTIYAIGGQNGTNVERTIECYTMG-DDK-W 379 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE-EECCEEEEECCcCCCCCCceEEEEECC-CCe-E
Confidence 56778888754 3477888877653221 11111111222 23577777777 3 247889986 322 2
Q ss_pred EEEec---cCCceEEEEEcCCCCEEEEEecCC
Q psy11036 120 HKFTC---HHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 120 ~~~~~---~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
..+.. .......+.+ +|+..+.||.++
T Consensus 380 ~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~ 409 (557)
T PHA02713 380 KMLPDMPIALSSYGMCVL--DQYIYIIGGRTE 409 (557)
T ss_pred EECCCCCcccccccEEEE--CCEEEEEeCCCc
Confidence 22211 1111112222 577777777654
No 411
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.90 E-value=0.49 Score=35.33 Aligned_cols=175 Identities=15% Similarity=0.056 Sum_probs=103.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeeecCCCC--EEEEEEecCCcEEEEeCCCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK--TVNVYDTRSPDPVMSVNHGSP--VESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~ 118 (239)
.-...+.|.. ++.++-+.+.-| .|+.+|+.+++.......+.. -..++...+.-+.++=-++...+||.. +.+.
T Consensus 45 aFTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~-tl~~ 122 (264)
T PF05096_consen 45 AFTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPN-TLKK 122 (264)
T ss_dssp -EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETT-TTEE
T ss_pred ccCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccc-cceE
Confidence 3456788866 677888777766 799999999987766543332 344555544333344448999999998 7888
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
+.++.- .+.=..++ .+++.|+.......++.+|.. .+....+ .+.+ .+.++. .+.-|.+-
T Consensus 123 ~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i------~V~~---~g~pv~-------~LNELE~i 183 (264)
T PF05096_consen 123 IGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTI------QVTD---NGRPVS-------NLNELEYI 183 (264)
T ss_dssp EEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEE------E-EE---TTEE----------EEEEEEE
T ss_pred EEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEE------EEEE---CCEECC-------CcEeEEEE
Confidence 888764 34556666 467778877777888888876 3333322 2222 222222 23334443
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec----------------CCCCeeeeEecC
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD----------------YPSPVLSIDVSM 239 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----------------~~~~v~~~~~sp 239 (239)
+|...|-.=....|...|..+|+.+..+. ...-.+.+||.|
T Consensus 184 -~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~ 240 (264)
T PF05096_consen 184 -NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDP 240 (264)
T ss_dssp -TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEET
T ss_pred -cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeC
Confidence 55555555555667777888887776653 123577888765
No 412
>KOG4441|consensus
Probab=95.86 E-value=0.95 Score=38.30 Aligned_cols=101 Identities=20% Similarity=0.245 Sum_probs=54.2
Q ss_pred eEEEEEecCCCCEEEEeeCC------CeEEEEeCCCCCceeeecCCC-CE-EEEEEecCCcEEEEeC-CC-----cEEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYD------KTVNVYDTRSPDPVMSVNHGS-PV-ESVLCLPSGGIFVTGG-GL-----DVCIW 110 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~d------g~v~vw~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~~-~~-----~i~~~ 110 (239)
-.+++.. ++.+.++|+.| .++..||..+.+....-.... +. .+++ .-+|...++|+ +| ++..|
T Consensus 325 ~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~-~l~g~iYavGG~dg~~~l~svE~Y 401 (571)
T KOG4441|consen 325 RVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVA-VLDGKLYAVGGFDGEKSLNSVECY 401 (571)
T ss_pred cccEEEE--CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeE-EECCEEEEEeccccccccccEEEe
Confidence 4455555 46888999998 367788888777433222111 11 1122 22577777777 43 47788
Q ss_pred EccCCC-eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 111 DMLGGG-KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 111 d~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
|.+... ..+..+.......-...+ +|...++||.++.-
T Consensus 402 Dp~~~~W~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 402 DPVTNKWTPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSS 440 (571)
T ss_pred cCCCCcccccCCCCcceeeeEEEEE--CCEEEEEcCcCCCc
Confidence 886221 111112211112222222 67888888877643
No 413
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.84 E-value=0.073 Score=27.42 Aligned_cols=31 Identities=13% Similarity=0.037 Sum_probs=25.9
Q ss_pred CcEEEEEEccCC---CeEEEEcCCceEEEEEccC
Q psy11036 189 KTVTSLCLASGG---KRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 189 ~~v~~~~~s~~~---~~l~s~s~d~~i~iwd~~~ 219 (239)
++|.++.|||+. .+|+-+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999844 5888888889999999985
No 414
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=95.83 E-value=0.93 Score=37.97 Aligned_cols=205 Identities=15% Similarity=0.129 Sum_probs=102.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.++.|+-.|..+|+.+..+.........+..+.. ..-..+++. +..++.++.|+.|.-+|.++++.+.......
T Consensus 77 ~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~---~~~rg~av~---~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~ 150 (527)
T TIGR03075 77 SYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCD---VVNRGVALY---DGKVFFGTLDARLVALDAKTGKVVWSKKNGD 150 (527)
T ss_pred CCCcEEEEECCCCceeeEecCCCCcccccccccc---cccccceEE---CCEEEEEcCCCEEEEEECCCCCEEeeccccc
Confidence 3467888888899888776543200000000000 000112332 3456677889999999999999877653211
Q ss_pred --CEEEEEEec---CCcEEEEeC------CCcEEEEEccCCCeEEEEEeccCCc--------------------------
Q psy11036 86 --PVESVLCLP---SGGIFVTGG------GLDVCIWDMLGGGKLLHKFTCHHKT-------------------------- 128 (239)
Q Consensus 86 --~v~~~~~~~---~~~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~-------------------------- 128 (239)
.-..+.-+| ++..++... +|.|.-+|.+ +++.+-.+..-...
T Consensus 151 ~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~-TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~ 229 (527)
T TIGR03075 151 YKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAK-TGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWK 229 (527)
T ss_pred ccccccccCCcEEECCEEEEeecccccCCCcEEEEEECC-CCceeEeccCcCCCcccccccccccccccccCCCCCCccc
Confidence 001111122 444444322 4778888988 66655443321110
Q ss_pred -----e-EEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecc----eeEEEEEccCCCEEEEEEecccCcE-------
Q psy11036 129 -----V-TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG----LDVCIWDMLGGGKLLHKFTCHHKTV------- 191 (239)
Q Consensus 129 -----i-~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~h~~~v------- 191 (239)
+ ..+++.|+..++..+.....- |+-..+ .|+ ..+.-.|+++ ++..-.++...+.+
T Consensus 230 ~gg~~~W~~~s~D~~~~lvy~~tGnp~p--~~~~~r-----~gdnl~~~s~vAld~~T-G~~~W~~Q~~~~D~wD~d~~~ 301 (527)
T TIGR03075 230 TGGGATWGTGSYDPETNLIYFGTGNPSP--WNSHLR-----PGDNLYTSSIVARDPDT-GKIKWHYQTTPHDEWDYDGVN 301 (527)
T ss_pred cCCCCccCceeEcCCCCeEEEeCCCCCC--CCCCCC-----CCCCccceeEEEEcccc-CCEEEeeeCCCCCCccccCCC
Confidence 0 112344444444444332211 211100 111 1355566665 44443333322111
Q ss_pred --EEEEEccCCC---eEEEEcCCceEEEEEccCCeeeEE
Q psy11036 192 --TSLCLASGGK---RLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 192 --~~~~~s~~~~---~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
.-+.+..+|+ .++.+..+|.+++.|..+|+++..
T Consensus 302 ~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~ 340 (527)
T TIGR03075 302 EMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSA 340 (527)
T ss_pred CcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecc
Confidence 1122224665 788999999999999999998743
No 415
>PRK13684 Ycf48-like protein; Provisional
Probab=95.70 E-value=0.76 Score=36.02 Aligned_cols=148 Identities=14% Similarity=0.043 Sum_probs=82.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~ 120 (239)
..+.++.+.| ++.++++ +..|.+..-.-..++....+ .....++++.+.++++.++++..|.+.+=..+ .+....
T Consensus 173 g~~~~i~~~~-~g~~v~~-g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d-~G~sW~ 249 (334)
T PRK13684 173 GVVRNLRRSP-DGKYVAV-SSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPD-DLESWS 249 (334)
T ss_pred ceEEEEEECC-CCeEEEE-eCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCC-CCCccc
Confidence 5688889888 5655554 44565543211222222222 34567899999999998888777766532222 333332
Q ss_pred EEecc----CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE---ecccCcEEE
Q psy11036 121 KFTCH----HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF---TCHHKTVTS 193 (239)
Q Consensus 121 ~~~~~----~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~h~~~v~~ 193 (239)
..... ...+..+.+.+++..++ ++.+|.+.. ..+ .++.-... ..-......
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~-S~d--------------------~G~tW~~~~~~~~~~~~~~~ 307 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLV-SKD--------------------GGKTWEKDPVGEEVPSNFYK 307 (334)
T ss_pred cccCCccccccceeeEEEcCCCCEEE-EcCCCeEEE-eCC--------------------CCCCCeECCcCCCCCcceEE
Confidence 22211 23578889988776555 446675542 222 11111111 111234677
Q ss_pred EEEccCCCeEEEEcCCceEEEEE
Q psy11036 194 LCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 194 ~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
+.|..+++.++ .+..|.|.-|+
T Consensus 308 ~~~~~~~~~~~-~G~~G~il~~~ 329 (334)
T PRK13684 308 IVFLDPEKGFV-LGQRGVLLRYV 329 (334)
T ss_pred EEEeCCCceEE-ECCCceEEEec
Confidence 77776666655 44678887765
No 416
>KOG1897|consensus
Probab=95.69 E-value=1.4 Score=38.93 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=107.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC----------CCeEEEEeCCCCCc
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY----------DKTVNVYDTRSPDP 77 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------dg~v~vw~~~~~~~ 77 (239)
..++++|-++.+.+...+-...- ....|.++.|..+.+.++++|.. .|.|.++.+...+.
T Consensus 750 s~l~vlD~nTf~vl~~hef~~~E----------~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~ 819 (1096)
T KOG1897|consen 750 SFLRVLDQNTFEVLSSHEFERNE----------TALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNS 819 (1096)
T ss_pred EEEEEecCCceeEEeeccccccc----------eeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCc
Confidence 45777777766655433322210 00345556688744667777642 47788888776433
Q ss_pred eeee---cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 78 VMSV---NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 78 ~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+... ...+.+.++..- +|+ +++|-...|++|+.. ..+.++.-..+..++..+...-.|..+++|..=+.+.+..
T Consensus 820 L~~v~e~~v~Gav~aL~~f-ngk-llA~In~~vrLye~t-~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~ 896 (1096)
T KOG1897|consen 820 LELVAETVVKGAVYALVEF-NGK-LLAGINQSVRLYEWT-TERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ 896 (1096)
T ss_pred eeeeeeeeeccceeehhhh-CCe-EEEecCcEEEEEEcc-ccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence 3333 345666665443 344 444557789999997 5556666667888999999988999999998888887766
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEE-EEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLH-KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.+.. .+.... .-..+..+.+++.+-. +..++.+-.+|.+.+-..
T Consensus 897 y~~~------------------eg~f~evArD~~p~Wmtaveil~-~d~ylgae~~gNlf~v~~ 941 (1096)
T KOG1897|consen 897 YKGD------------------EGNFEEVARDYNPNWMTAVEILD-DDTYLGAENSGNLFTVRK 941 (1096)
T ss_pred Eecc------------------CCceEEeehhhCccceeeEEEec-CceEEeecccccEEEEEe
Confidence 6511 111111 1123455666666643 344455556676666544
No 417
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=95.64 E-value=0.9 Score=36.46 Aligned_cols=142 Identities=12% Similarity=0.057 Sum_probs=79.8
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEE-EEeCCCCCc---eeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe---
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVN-VYDTRSPDP---VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK--- 117 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~-vw~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~--- 117 (239)
...+..++ ++.+++.+.. |.+. -|| .++. .........++++.+.+++..++++..|.+..-+- .++
T Consensus 241 f~~v~~~~-dG~~~~vg~~-G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~d--~G~~~~ 314 (398)
T PLN00033 241 FSTVNRSP-DGDYVAVSSR-GNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYVSKG--TGLTEE 314 (398)
T ss_pred eeeEEEcC-CCCEEEEECC-ccEEEecC--CCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEEecC--CCCccc
Confidence 33445556 5656655544 4332 233 2322 12234566789999999999999888877654332 332
Q ss_pred --EEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE---ecccCc
Q psy11036 118 --LLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF---TCHHKT 190 (239)
Q Consensus 118 --~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~h~~~ 190 (239)
....... ....+..+.+.+++..+++ +..|.+....-. ++.-... ..-...
T Consensus 315 ~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~-G~~G~v~~s~D~---------------------G~tW~~~~~~~~~~~~ 372 (398)
T PLN00033 315 DFDFEEADIKSRGFGILDVGYRSKKEAWAA-GGSGILLRSTDG---------------------GKSWKRDKGADNIAAN 372 (398)
T ss_pred ccceeecccCCCCcceEEEEEcCCCcEEEE-ECCCcEEEeCCC---------------------CcceeEccccCCCCcc
Confidence 2232221 1235888999877665554 567766554322 1211111 122345
Q ss_pred EEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 191 VTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
...+.|.++++.+++| .+|.|.-|
T Consensus 373 ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 373 LYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred eeEEEEcCCCceEEEe-CCcEEEEe
Confidence 7788888777766655 57777654
No 418
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.64 E-value=0.8 Score=35.83 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=35.1
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEccCCC-eEEEEEe----ccCCceEEEEEcCC
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDMLGGG-KLLHKFT----CHHKTVTSLCLASG 137 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~-~~~~~~~----~~~~~i~~i~~~~~ 137 (239)
..+.|+|.|+++++++-..|.|.+++..... ..+..+. ........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEEETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEEeCCceEEEEeCCCcCcceecccccccccccCCcccceeccc
Confidence 4578999999999887778999999943111 2233331 23457899999994
No 419
>KOG2377|consensus
Probab=95.60 E-value=0.26 Score=39.46 Aligned_cols=135 Identities=8% Similarity=0.096 Sum_probs=78.8
Q ss_pred EEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--ceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC---Ce
Q psy11036 46 RAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG---GK 117 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~---~~ 117 (239)
+.+-|.. .+..+.+-..|.+.=|-+.... ....+ ..+++|.++.|++|.+.+++-- +.+|.+++.... .+
T Consensus 26 ngvFfDD--aNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~ 103 (657)
T KOG2377|consen 26 NGVFFDD--ANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE 103 (657)
T ss_pred cceeecc--CcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH
Confidence 3454543 3333333344556666654332 22223 4678999999999999999887 799999987411 11
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
..++.+..+..|..+.|... .-+|.....| +.+|... .....++..+.|...|.--.|+
T Consensus 104 ~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~-------------------pekrslRlVks~~~nvnWy~yc 162 (657)
T KOG2377|consen 104 YTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVL-------------------PEKRSLRLVKSHNLNVNWYMYC 162 (657)
T ss_pred HHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEc-------------------hhhhhhhhhhhcccCccEEEEc
Confidence 22333444567899999865 5566655444 4444433 1122333345566666666677
Q ss_pred cCCCeE
Q psy11036 198 SGGKRL 203 (239)
Q Consensus 198 ~~~~~l 203 (239)
++-+.+
T Consensus 163 ~et~v~ 168 (657)
T KOG2377|consen 163 PETAVI 168 (657)
T ss_pred cccceE
Confidence 765543
No 420
>KOG1900|consensus
Probab=95.54 E-value=0.21 Score=44.94 Aligned_cols=134 Identities=12% Similarity=0.276 Sum_probs=85.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEe--------cCCCCEEEEeeCCCeEEEEeCCCCC-
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS--------PVSSDIVISGSYDKTVNVYDTRSPD- 76 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~l~s~~~dg~v~vw~~~~~~- 76 (239)
.|+.+.+|+.+++.....+.+-. ..|..+..- |.=.++|+.+. --.|.++-+.-.+
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~s--------------htIl~V~LvkPkpgvFv~~IqhlLvvaT-~~ei~ilgV~~~~~ 161 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLS--------------HTILKVGLVKPKPGVFVPEIQHLLVVAT-PVEIVILGVSFDEF 161 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchh--------------hhheeeeeecCCCCcchhhhheeEEecc-cceEEEEEEEeccc
Confidence 47899999999988777787755 445555433 21123344433 3456665443211
Q ss_pred ---ce-----eeec-CCCCEEEEEEecCCcEEEEeCCCcEEEEEcc----CC--Ce-----------------EEEEEe-
Q psy11036 77 ---PV-----MSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDML----GG--GK-----------------LLHKFT- 123 (239)
Q Consensus 77 ---~~-----~~~~-~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~----~~--~~-----------------~~~~~~- 123 (239)
.. .++. .+..|.|+....+|+.+++|.||. +|.+- .. ++ .+-.+.
T Consensus 162 ~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~ 239 (1311)
T KOG1900|consen 162 TGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPG 239 (1311)
T ss_pred cCcccccccceeeecCCceEEEEEeccCCcEEEeecCCC--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCC
Confidence 10 1122 356789999888999999999884 44331 10 00 011122
Q ss_pred ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 124 ~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+..+|..++....-..+.+-++.++|.+||+.
T Consensus 240 ~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 240 SSKDPIRQITIDNSRNILYVLSEKGTVSAYDIG 272 (1311)
T ss_pred CCCCcceeeEeccccceeeeeccCceEEEEEcc
Confidence 456799999998777888999999999999997
No 421
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.46 E-value=0.47 Score=38.70 Aligned_cols=132 Identities=14% Similarity=0.180 Sum_probs=82.2
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC------CCEEEEeeCCCeEEEEeCCC-CCce
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS------SDIVISGSYDKTVNVYDTRS-PDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~l~s~~~dg~v~vw~~~~-~~~~ 78 (239)
....++-.|++.|+.+.+...|. .+ -+.|.|.. ...-+.|-.+..|.-.|.+- +..+
T Consensus 488 ~~~kLykmDIErGkvveeW~~~d---------------dv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi 551 (776)
T COG5167 488 ERDKLYKMDIERGKVVEEWDLKD---------------DV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKI 551 (776)
T ss_pred CcccceeeecccceeeeEeecCC---------------cc-eeecCCchhHHhcCccceEEeecccceEEecccccCCce
Confidence 33556666788888888888885 34 66777731 12233455555555556542 3222
Q ss_pred eeecC-----CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 79 MSVNH-----GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 79 ~~~~~-----~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
..... .....+..-. ...++++++ .|.|++||-- .......+++....|..+....+|+++++.+ ...+.+
T Consensus 552 ~v~esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRi-g~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL 628 (776)
T COG5167 552 KVVESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRI-GKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLL 628 (776)
T ss_pred eeeeehhccccccccccccc-cCceEEEecCCCceeeehhh-cchhhhcCcccccceeeeEeecCCcEEEEee-cceEEE
Confidence 22222 2223333333 344777777 6999999975 4445555677778999999999999877665 456778
Q ss_pred EEcc
Q psy11036 153 YEMT 156 (239)
Q Consensus 153 ~d~~ 156 (239)
-|++
T Consensus 629 ~d~~ 632 (776)
T COG5167 629 TDVP 632 (776)
T ss_pred Eecc
Confidence 8876
No 422
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.44 E-value=0.77 Score=34.39 Aligned_cols=134 Identities=15% Similarity=0.112 Sum_probs=77.9
Q ss_pred CEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc-ccceEee
Q psy11036 86 PVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSS 162 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~ 162 (239)
.+...+++++++.++... ++.-.+|-....+.....+. ...+...+|++++...+....+...+++.. ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~----- 97 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSAS----- 97 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeecc--CCccccccccCCCCEEEEEcCCCceEEEEecCC-----
Confidence 688999999999887665 54444444442333333233 237788899999877766666666555531 10
Q ss_pred eecceeEEEEEccCCCEEEEE-EecccCcEEEEEEccCCCeEEEEc---CCceEEEEEcc---CC------eeeEEec-C
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISAS---LDHHAKIYEMV---NF------SPVHTLD-Y 228 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s---~d~~i~iwd~~---~~------~~~~~~~-~ 228 (239)
........ ...-...|..+.+||||..++... .++.|.+=-+. .+ .++.... .
T Consensus 98 -------------g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~ 164 (253)
T PF10647_consen 98 -------------GTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPL 164 (253)
T ss_pred -------------CcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccc
Confidence 00111111 111112799999999999877554 35777776543 23 1111111 2
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
...+.+++|.+
T Consensus 165 ~~~v~~v~W~~ 175 (253)
T PF10647_consen 165 LSDVTDVAWSD 175 (253)
T ss_pred cCcceeeeecC
Confidence 45788888864
No 423
>KOG4460|consensus
Probab=95.29 E-value=1 Score=37.01 Aligned_cols=92 Identities=12% Similarity=0.121 Sum_probs=54.3
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecc-ee--EEEEEccCCCEEEEEEecccCcEEEEEEccCC---
Q psy11036 128 TVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGG-LD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG--- 200 (239)
Q Consensus 128 ~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~-~~--i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~--- 200 (239)
.|..+..++.|..++..|.+|.+.++=.+ ...-..+..+ .. .+...+ +..+..-. ..-.+..++|+|+.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i---~~~~ftss-~~ltl~Qa~WHP~S~~D 180 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPV---AERFFTSS-TSLTLKQAAWHPSSILD 180 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecc---cceeeccC-CceeeeeccccCCccCC
Confidence 56778889999999999999976655433 1111111111 11 111211 11111111 22346778999975
Q ss_pred CeEEEEcCCceEEEEEccCCeee
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
..|..-+.|..+|+||+.....+
T Consensus 181 ~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 181 PHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred ceEEEEecCcEEEEEecCCcchh
Confidence 56777788999999999765544
No 424
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=95.29 E-value=0.73 Score=33.21 Aligned_cols=150 Identities=11% Similarity=0.101 Sum_probs=84.8
Q ss_pred CEEEEeeCCCeEEEEeCCC--CCceeeecCCCCEEEEEEecCCcEEEEeC----CC---cEEEE---Ecc-CCCeEEE-E
Q psy11036 56 DIVISGSYDKTVNVYDTRS--PDPVMSVNHGSPVESVLCLPSGGIFVTGG----GL---DVCIW---DML-GGGKLLH-K 121 (239)
Q Consensus 56 ~~l~s~~~dg~v~vw~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~---~i~~~---d~~-~~~~~~~-~ 121 (239)
+.|+.+.....|.+|++.+ .+...++..-+.|..+.++..|.++++-- .. .+++| +.. ....++. +
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR 108 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR 108 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence 5554446667899999983 34555667779999999999999999986 13 45664 221 0111111 1
Q ss_pred Eec---------------------cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEE
Q psy11036 122 FTC---------------------HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKL 180 (239)
Q Consensus 122 ~~~---------------------~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~ 180 (239)
+-+ -+.++.+++-.|-..-|+.|+ ++.+.+|.+..+... ...+.+.|....
T Consensus 109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~----~~~~~~lDFe~~--- 180 (215)
T PF14761_consen 109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQ----SEKFSFLDFERS--- 180 (215)
T ss_pred EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEe----cccccEEechhh---
Confidence 112 234667788888444455553 667889988722211 111223332210
Q ss_pred EEEEeccc-CcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 181 LHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 181 ~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
.+.-|. -....+++. +.++|..+ +-.++++.+.
T Consensus 181 --l~~~~~~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl~ 214 (215)
T PF14761_consen 181 --LIDHIDNFKPTQVAIC--EGYIAVMS-DLEVLVLKLE 214 (215)
T ss_pred --hhheecCceEEEEEEE--eeEEEEec-CCEEEEEEEe
Confidence 001111 224566665 66888776 4567776653
No 425
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.29 E-value=0.5 Score=39.16 Aligned_cols=114 Identities=16% Similarity=0.203 Sum_probs=70.6
Q ss_pred CCeEEEEEecCC---CCEEEEeeCCCeEEEEeCCC-----CCceee----ec--CCCCEEEEEEecCCcEEEEeCCCcE-
Q psy11036 43 DYVRAGTVSPVS---SDIVISGSYDKTVNVYDTRS-----PDPVMS----VN--HGSPVESVLCLPSGGIFVTGGGLDV- 107 (239)
Q Consensus 43 ~~v~~~~~~~~~---~~~l~s~~~dg~v~vw~~~~-----~~~~~~----~~--~~~~v~~~~~~~~~~~l~~~~~~~i- 107 (239)
+.|..+.|.|-. ...|++.-....|.||.+.. .+.... +. .+--...+.|+|....|++-....+
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS 136 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS 136 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence 568999999841 22344445668899999852 222111 11 1122367889999998888774444
Q ss_pred EEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEcc
Q psy11036 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMT 156 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~~ 156 (239)
.+++++.....++.=-...+.|.|.+|.+||+.|+++ +..=.-++||-.
T Consensus 137 V~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 137 VLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred EeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 3455553443333222457889999999999876654 344456688754
No 426
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.28 E-value=0.48 Score=40.58 Aligned_cols=113 Identities=8% Similarity=0.146 Sum_probs=73.3
Q ss_pred CeEEEEEecC-CCCEEEEeeCCCeEEEEeCCC-------C-------------CceeeecCCCCEEEEEEe--cCCcEEE
Q psy11036 44 YVRAGTVSPV-SSDIVISGSYDKTVNVYDTRS-------P-------------DPVMSVNHGSPVESVLCL--PSGGIFV 100 (239)
Q Consensus 44 ~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~-------~-------------~~~~~~~~~~~v~~~~~~--~~~~~l~ 100 (239)
.|.-+....- +.+.|+.+..||.|.+|.+++ . ++...+..+..+..++++ ...+++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence 3555544332 456888999999999996521 0 112223456788999998 7788888
Q ss_pred EeCC-CcEEEEEccCC--CeEEEEEeccCCceEEEEEcCCC---C---EEEEEecCCeEEEEEcc
Q psy11036 101 TGGG-LDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGG---K---RLISASLDHHAKIYEMT 156 (239)
Q Consensus 101 ~~~~-~~i~~~d~~~~--~~~~~~~~~~~~~i~~i~~~~~~---~---~l~~~~~d~~i~i~d~~ 156 (239)
++++ ..|.||-.... ......-..+...|.+|+|-++. . .+++++-.|.+.+|++.
T Consensus 182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 8884 66777644321 11111111256678899997643 2 78889999999999884
No 427
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.16 E-value=0.8 Score=32.88 Aligned_cols=172 Identities=9% Similarity=-0.003 Sum_probs=85.8
Q ss_pred CEEEEeeCCCcceeeeeeCCc-eeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHT-TIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSP 86 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~ 86 (239)
..|++||+.+++.+..-+-.. ..++ ..++.+ +..+..-.-.+|.-..+|.++.+++..+..++.
T Consensus 68 S~ir~~~L~~gq~~~s~~l~~~~~Fg----------EGit~~-----gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~Ge 132 (262)
T COG3823 68 SKIRVSDLTTGQEIFSEKLAPDTVFG----------EGITKL-----GDYFYQLTWKEGVAFKYDADTLEELGRFSYEGE 132 (262)
T ss_pred ceeEEEeccCceEEEEeecCCccccc----------cceeec-----cceEEEEEeccceeEEEChHHhhhhcccccCCc
Confidence 578999999888765443331 0000 222222 233333345678888999999888888876676
Q ss_pred EEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe--ccCCce---EEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 87 VESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT--CHHKTV---TSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~i---~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
=..++.. +..+..+. ...+..-|.+ +.....++. ....+| +.+.|- +|...|-.=.+..|...+.+ ++.
T Consensus 133 GWgLt~d--~~~LimsdGsatL~frdP~-tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV 208 (262)
T COG3823 133 GWGLTSD--DKNLIMSDGSATLQFRDPK-TFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRV 208 (262)
T ss_pred ceeeecC--CcceEeeCCceEEEecCHH-HhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcE
Confidence 6666654 33344433 4556665654 322222221 111222 223332 44444433333334333433 222
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEc
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISAS 207 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s 207 (239)
+..+|+..-...+..-..|..-...+++.|++ ++++||-
T Consensus 209 ---------~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 209 ---------VAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred ---------EEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 22223322112222223345567789999976 6666663
No 428
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.11 E-value=0.28 Score=41.22 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=29.5
Q ss_pred cEEEEEEcc----CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 190 TVTSLCLAS----GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 190 ~v~~~~~s~----~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
....+++++ +..+|++.+.|+++|+||+.+++++.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 345556655 67899999999999999999999977764
No 429
>KOG2247|consensus
Probab=94.97 E-value=0.0021 Score=51.02 Aligned_cols=141 Identities=12% Similarity=0.143 Sum_probs=92.1
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~ 122 (239)
.....|.|.+.+ ++.++.+-.+..||-. ++.......++....++|..++..+++.. .+.+.+||+.......-.+
T Consensus 37 pi~~~w~~e~~n-lavaca~tiv~~YD~a-gq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~ 114 (615)
T KOG2247|consen 37 PIIHRWRPEGHN-LAVACANTIVIYYDKA-GQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES 114 (615)
T ss_pred cceeeEecCCCc-eehhhhhhHHHhhhhh-cceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence 345678884444 7777778888889854 44555556677788899999888777666 5899999996322211111
Q ss_pred e-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC
Q psy11036 123 T-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201 (239)
Q Consensus 123 ~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 201 (239)
. .|.... +.|++....++.+...|.+.|++.. ..+....+..|...++++++.+.+.
T Consensus 115 gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhg--------------------tsR~iiv~Gkh~RRgtq~av~lEd~ 172 (615)
T KOG2247|consen 115 GGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHG--------------------TSRRIIVMGKHQRRGTQIAVTLEDY 172 (615)
T ss_pred cCcchHHH--HhhccCCccccccccccceEEEecc--------------------chhhhhhhcccccceeEEEecccce
Confidence 1 122222 6788888888888888999888876 1122222233777888888887655
Q ss_pred eEEEEcCCc
Q psy11036 202 RLISASLDH 210 (239)
Q Consensus 202 ~l~s~s~d~ 210 (239)
.+ .++.|.
T Consensus 173 vi-l~dcd~ 180 (615)
T KOG2247|consen 173 VI-LCDCDN 180 (615)
T ss_pred ee-ecCcHH
Confidence 43 343343
No 430
>KOG3630|consensus
Probab=94.79 E-value=0.12 Score=45.82 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=69.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
....++.|+|.=....+....|+.|++..+.... .+..+.....+++++|+|.|+.++.|. .|++.-|... .+...
T Consensus 156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~--leik~ 233 (1405)
T KOG3630|consen 156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS--LEIKS 233 (1405)
T ss_pred cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc--cceee
Confidence 4466889998444456777889999998876433 333456778899999999999999998 5888877653 33333
Q ss_pred EEec----cCCceEEEEEcCCCCEEEE
Q psy11036 121 KFTC----HHKTVTSLCLASGGKRLIS 143 (239)
Q Consensus 121 ~~~~----~~~~i~~i~~~~~~~~l~~ 143 (239)
.+.. ....|.+++|-..-.++++
T Consensus 234 ~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 234 EIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred cccCCCcCCCcceeEEEEecceeEEEE
Confidence 3321 1367899999766555554
No 431
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.71 E-value=1.4 Score=33.60 Aligned_cols=182 Identities=14% Similarity=0.154 Sum_probs=108.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCC------CCCc-eeeec------CCCCEEEEEEecCCc------------
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTR------SPDP-VMSVN------HGSPVESVLCLPSGG------------ 97 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~------~~~~-~~~~~------~~~~v~~~~~~~~~~------------ 97 (239)
..-..|+++| .+.+-++....+...+||.. ..+. +.++. .....+.+.|+....
T Consensus 23 ~N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 23 RNAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred cccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 3456899999 77777777777899999986 1222 22332 234577777774332
Q ss_pred -EEEEeCCCcEEEEEccCCCe----EEEEEecc--CCceEEEEEcCC--CCEEEEE-ecCCeEEEEEcccceEee---e-
Q psy11036 98 -IFVTGGGLDVCIWDMLGGGK----LLHKFTCH--HKTVTSLCLASG--GKRLISA-SLDHHAKIYEMTLKTVSS---F- 163 (239)
Q Consensus 98 -~l~~~~~~~i~~~d~~~~~~----~~~~~~~~--~~~i~~i~~~~~--~~~l~~~-~~d~~i~i~d~~~~~~~~---~- 163 (239)
+|.++.+|+|.-|....... ....+... ...-..+++... +.+|..+ -..++|.+||-....+.. +
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~ 181 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI 181 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence 34444479999998532211 11222211 122345565533 4455444 457899999876332111 1
Q ss_pred -------------------------------------ecceeEEEEEccCCCEEEEEEe--cccCcEEEEEEcc------
Q psy11036 164 -------------------------------------TGGLDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLAS------ 198 (239)
Q Consensus 164 -------------------------------------~~~~~i~~~d~~~~~~~~~~~~--~h~~~v~~~~~s~------ 198 (239)
.|.+-|-+||.. +..++.+. +.-..-+.|+..|
T Consensus 182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~--G~l~~r~as~g~LNaPWG~a~APa~FG~~ 259 (336)
T TIGR03118 182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN--GQLLRRVASSGRLNAPWGLAIAPESFGSL 259 (336)
T ss_pred CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC--CcEEEEeccCCcccCCceeeeChhhhCCC
Confidence 123346777764 45555542 2334456677765
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.|.+|+---.||+|..||..+++.+..+.
T Consensus 260 sg~lLVGNFGDG~InaFD~~sG~~~g~L~ 288 (336)
T TIGR03118 260 SGALLVGNFGDGTINAYDPQSGAQLGQLL 288 (336)
T ss_pred CCCeEEeecCCceeEEecCCCCceeeeec
Confidence 46677766679999999999998887776
No 432
>KOG1916|consensus
Probab=94.63 E-value=0.017 Score=49.56 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=66.5
Q ss_pred cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccC-CCeE-----EEEEeccCCceEEEEEcC---CCCEEEEEecCCeE
Q psy11036 82 NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLG-GGKL-----LHKFTCHHKTVTSLCLAS---GGKRLISASLDHHA 150 (239)
Q Consensus 82 ~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~-~~~~-----~~~~~~~~~~i~~i~~~~---~~~~l~~~~~d~~i 150 (239)
+..+.+-.++|.. +...+. . -|.+.+|++.. .++. ++........+.-+.|.| +..++..+-.++.+
T Consensus 130 gf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i 207 (1283)
T KOG1916|consen 130 GFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEI 207 (1283)
T ss_pred cCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCce
Confidence 3556666666643 111121 2 27889998752 1222 222233344556666665 56778888888888
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE-----------EEccCCCeEEEEcCCceEEEEEc
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL-----------CLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~-----------~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
++..... .....+.+|...+..+ .+||||..++.++.||.++.|.+
T Consensus 208 ~lL~~~r---------------------a~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 208 RLLNINR---------------------ALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eEeeech---------------------HHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 8776651 0011122344433332 37999999999999999888865
No 433
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.61 E-value=0.22 Score=36.33 Aligned_cols=77 Identities=18% Similarity=0.215 Sum_probs=46.7
Q ss_pred EcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 134 LASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 134 ~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
+..++.++++.+.+|.+++||+. .+.+..-. .+..+-.... .. -......|..+.++.+|.-+++-+ +|..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~-----Si~pll~~~~-~~-~~~~~~~i~~~~lt~~G~PiV~ls-ng~~ 89 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPV-----SIAPLLNSSP-VS-DKSSSPNITSCSLTSNGVPIVTLS-NGDS 89 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCc-----cHHHHhcccc-cc-cCCCCCcEEEEEEcCCCCEEEEEe-CCCE
Confidence 44578899999999999999998 33322210 0000000000 00 003456788888888888777765 4778
Q ss_pred EEEEcc
Q psy11036 213 KIYEMV 218 (239)
Q Consensus 213 ~iwd~~ 218 (239)
+.|+..
T Consensus 90 y~y~~~ 95 (219)
T PF07569_consen 90 YSYSPD 95 (219)
T ss_pred EEeccc
Confidence 888764
No 434
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.37 E-value=1.4 Score=35.55 Aligned_cols=99 Identities=15% Similarity=0.101 Sum_probs=59.2
Q ss_pred ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeE--EEEEccCCCEEEEEEecccCcEEEEEEcc-C
Q psy11036 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDV--CIWDMLGGGKLLHKFTCHHKTVTSLCLAS-G 199 (239)
Q Consensus 124 ~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i--~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~ 199 (239)
.....+.+++.+|.+++.++...=|.|.++|+. +..++.+.|-.+. ..+........ |...-....-.+ .
T Consensus 305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~------~~~~~~~~~~~~~~ 378 (415)
T PF14655_consen 305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDR------DRSNSNSPKSSSRF 378 (415)
T ss_pred cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeeccccc------ccccccccCCCCcc
Confidence 344568899999999988888778999999999 6666666554441 11111111000 000000000000 0
Q ss_pred CCeE-EEEcCCceEEEEEccCCeeeEEecC
Q psy11036 200 GKRL-ISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 200 ~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
..+| +-+-.-|.|-||.+++|..+..+..
T Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 379 ALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred eEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 1223 3355689999999999999988873
No 435
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.25 E-value=2.9 Score=36.42 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=65.7
Q ss_pred CCCEEEEeeCCCcceee-eeeCCce----eeccce---eeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC---
Q psy11036 6 PILIVALWDIPSEAQVS-TFTNHTT----IYKVPL---MLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS--- 74 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~-~~~~~~~----~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~--- 74 (239)
.|+.+++||-....... .++.... .-+.+. .+-.+..-.|..+.++| ++.+++..|..| |.|-.+..
T Consensus 40 ~d~~L~vWd~~e~~l~~~nlr~~~~~~~~~~~~~~q~L~~~~~~~f~v~~i~~n~-~g~~lal~G~~~-v~V~~LP~r~g 117 (717)
T PF10168_consen 40 RDGDLFVWDSSECCLLTVNLRSLESDAEGPAKSSYQKLLPSNPPLFEVHQISLNP-TGSLLALVGPRG-VVVLELPRRWG 117 (717)
T ss_pred eCCEEEEEECCCCEEEEEeeccccccccCccccCcceeecCCCCceeEEEEEECC-CCCEEEEEcCCc-EEEEEeccccC
Confidence 56899999975544321 1221110 001111 22233345788999999 788888777765 44444321
Q ss_pred -------CCc-e--eee---------cCCCCEEEEEEecC---CcEEE-EeCCCcEEEEEccCCCeEEEEE
Q psy11036 75 -------PDP-V--MSV---------NHGSPVESVLCLPS---GGIFV-TGGGLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 75 -------~~~-~--~~~---------~~~~~v~~~~~~~~---~~~l~-~~~~~~i~~~d~~~~~~~~~~~ 122 (239)
++. + +++ .....|..+.|+|. +..|+ ..+|+.+++||+.....+...+
T Consensus 118 ~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~~p~~v~ 188 (717)
T PF10168_consen 118 KNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQHPWQVL 188 (717)
T ss_pred ccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCCCCeEEE
Confidence 111 1 111 13457899999995 34554 4559999999997545444444
No 436
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.20 E-value=1.8 Score=32.50 Aligned_cols=130 Identities=10% Similarity=0.021 Sum_probs=78.3
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCE
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPV 87 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v 87 (239)
..|+.+|+.+++......-... ---..++... +.+..-.-.++...+||..+.+.+.++...+.=
T Consensus 68 S~l~~~d~~tg~~~~~~~l~~~-------------~FgEGit~~~--d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EG 132 (264)
T PF05096_consen 68 SSLRKVDLETGKVLQSVPLPPR-------------YFGEGITILG--DKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEG 132 (264)
T ss_dssp EEEEEEETTTSSEEEEEE-TTT---------------EEEEEEET--TEEEEEESSSSEEEEEETTTTEEEEEEE-SSS-
T ss_pred EEEEEEECCCCcEEEEEECCcc-------------ccceeEEEEC--CEEEEEEecCCeEEEEccccceEEEEEecCCcc
Confidence 3788899999987766554431 2223455543 455555567899999999999888888666666
Q ss_pred EEEEEecCCcEEEEe-CCCcEEEEEccCCCeEEEEEeccC--C---ceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 88 ESVLCLPSGGIFVTG-GGLDVCIWDMLGGGKLLHKFTCHH--K---TVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 88 ~~~~~~~~~~~l~~~-~~~~i~~~d~~~~~~~~~~~~~~~--~---~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..++ .+++.|+.+ ++..+..+|.. +.+...++.-.. . .++.+.+- +|...|-.=....|...|..
T Consensus 133 WGLt--~dg~~Li~SDGS~~L~~~dP~-~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~ 203 (264)
T PF05096_consen 133 WGLT--SDGKRLIMSDGSSRLYFLDPE-TFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPE 203 (264)
T ss_dssp -EEE--ECSSCEEEE-SSSEEEEE-TT-T-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred eEEE--cCCCEEEEECCccceEEECCc-ccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCC
Confidence 6676 345555544 47889999987 566665554321 1 34556664 55555555555566666665
No 437
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.15 E-value=3.4 Score=35.68 Aligned_cols=144 Identities=7% Similarity=0.118 Sum_probs=86.2
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCce------eee-----------------cCCCCEEEEEEec--CCcEEEEeC-CCcEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPV------MSV-----------------NHGSPVESVLCLP--SGGIFVTGG-GLDVC 108 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~------~~~-----------------~~~~~v~~~~~~~--~~~~l~~~~-~~~i~ 108 (239)
.++++.+. .+.|.||+....... ..+ ..+..|+.|.... ....|+++. ||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 45666654 578999997533211 111 0112244444332 334555555 69999
Q ss_pred EEEccC-------C---C---------eEEEEEeccCCceEEEEEc--CCCCEEEEEecCCeEEEEEcccceEeeeecce
Q psy11036 109 IWDMLG-------G---G---------KLLHKFTCHHKTVTSLCLA--SGGKRLISASLDHHAKIYEMTLKTVSSFTGGL 167 (239)
Q Consensus 109 ~~d~~~-------~---~---------~~~~~~~~~~~~i~~i~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 167 (239)
+|.++. . . ++...+. ....+.+++++ ...++||+++....|.||-.....
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~-------- 198 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVD-------- 198 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccc--------
Confidence 997631 0 0 0112222 34578999998 778899999998999888765110
Q ss_pred eEEEEEccCCCEEEEEEecccCcEEEEEEccCC---C---eEEEEcCCceEEEEEc
Q psy11036 168 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG---K---RLISASLDHHAKIYEM 217 (239)
Q Consensus 168 ~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~---~---~l~s~s~d~~i~iwd~ 217 (239)
.......-..|...|.+++|-++. . .|++++-.|.+.+|++
T Consensus 199 ---------~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 199 ---------ERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ---------cccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 011111112356778899998743 2 7888899999999888
No 438
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=94.05 E-value=2 Score=32.67 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=59.3
Q ss_pred CCCCCC--CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee------CCCeEEEEeC
Q psy11036 1 MSHDLP--ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS------YDKTVNVYDT 72 (239)
Q Consensus 1 fs~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------~dg~v~vw~~ 72 (239)
|...|. =..|++||..+.+=...-.+-. +.|+++.|.. +.++++.|. ....+..||+
T Consensus 7 F~~aGsL~C~~lC~yd~~~~qW~~~g~~i~--------------G~V~~l~~~~-~~~Llv~G~ft~~~~~~~~la~yd~ 71 (281)
T PF12768_consen 7 FTSAGSLPCPGLCLYDTDNSQWSSPGNGIS--------------GTVTDLQWAS-NNQLLVGGNFTLNGTNSSNLATYDF 71 (281)
T ss_pred cCCCCCcCCCEEEEEECCCCEeecCCCCce--------------EEEEEEEEec-CCEEEEEEeeEECCCCceeEEEEec
Confidence 444443 3689999987655333223333 7899999986 667777664 3567889998
Q ss_pred CCCCceeeec-----CCCCEEEEEEec-CCc-EEEEeC--C--CcEEEEEcc
Q psy11036 73 RSPDPVMSVN-----HGSPVESVLCLP-SGG-IFVTGG--G--LDVCIWDML 113 (239)
Q Consensus 73 ~~~~~~~~~~-----~~~~v~~~~~~~-~~~-~l~~~~--~--~~i~~~d~~ 113 (239)
.+......-. .++++..+.+.. ++. ..++|. + ..|..||-.
T Consensus 72 ~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs 123 (281)
T PF12768_consen 72 KNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGS 123 (281)
T ss_pred CCCeeeecCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCC
Confidence 8765422222 247888887754 333 333433 2 346666543
No 439
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=93.49 E-value=2.8 Score=32.35 Aligned_cols=137 Identities=9% Similarity=0.084 Sum_probs=66.0
Q ss_pred cCCCCEEEEEEecCCcEEEEeCCCcEE-EEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
...+.+..+.-+++|++++++..|.+. -||.-...-..+. ..-...|..|.|.|++...+.+ ..|.|+.=+.. .
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~-r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~-~-- 216 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHN-RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP-D-- 216 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE---SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T-T--
T ss_pred CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEc-cCccceehhceecCCCCEEEEe-CCcEEEEccCC-C--
Confidence 455778889999999999999977765 5665311112222 2246789999999998766654 88888876621 0
Q ss_pred eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec----CCCCeeeeE
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD----YPSPVLSID 236 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~----~~~~v~~~~ 236 (239)
+..-|. +.......-.-.+..++|.+++...++|+. |.+ +.....|+.-++.+ .++.++.+.
T Consensus 217 -------~~~~w~-----~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~ 282 (302)
T PF14870_consen 217 -------DGETWS-----EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIV 282 (302)
T ss_dssp -------EEEEE--------B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEE
T ss_pred -------Cccccc-----cccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEE
Confidence 011111 000001112234789999998888776654 443 33344444433332 234455554
Q ss_pred e
Q psy11036 237 V 237 (239)
Q Consensus 237 ~ 237 (239)
|
T Consensus 283 f 283 (302)
T PF14870_consen 283 F 283 (302)
T ss_dssp E
T ss_pred E
Confidence 4
No 440
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.36 E-value=3.3 Score=32.91 Aligned_cols=190 Identities=13% Similarity=0.198 Sum_probs=83.7
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CC-eEEEEeCCCC-Cceeee
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DK-TVNVYDTRSP-DPVMSV 81 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg-~v~vw~~~~~-~~~~~~ 81 (239)
...|.--|+.+|+....+... ..+.-+.|+|.+..+|+-|-+ +. .-|||-+++. .....+
T Consensus 167 ~~~i~~idl~tG~~~~v~~~~---------------~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v 231 (386)
T PF14583_consen 167 HCRIFTIDLKTGERKVVFEDT---------------DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKV 231 (386)
T ss_dssp -EEEEEEETTT--EEEEEEES---------------S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EES
T ss_pred CceEEEEECCCCceeEEEecC---------------ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceee
Confidence 345666788888876666554 778899999977777666433 22 2367766432 222322
Q ss_pred -c--CCCCEEEEEEecCCcEEEEeC---C---CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 82 -N--HGSPVESVLCLPSGGIFVTGG---G---LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 82 -~--~~~~v~~~~~~~~~~~l~~~~---~---~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
. ....+..=-|.|+|..+.--+ . ..|.-+|+. +++...... ......+-.++||++++-=+.|..+.+
T Consensus 232 ~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~-t~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v 308 (386)
T PF14583_consen 232 HRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPD-TGERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDV 308 (386)
T ss_dssp S---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TT-T--EEEEEE--E-SEEEEEE-TTSSEEEEEE-------
T ss_pred ecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCC-CCCceEEEe--CCceeeeEEcCCCCEEEecCCCCCccc
Confidence 2 223445556889998776533 2 346667776 443322222 123445556788887766555433322
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEE-EE-------EEecccC-cEEEEEEccCCCeEE-EEcCCceEEEEEc
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKL-LH-------KFTCHHK-TVTSLCLASGGKRLI-SASLDHHAKIYEM 217 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~-~~-------~~~~h~~-~v~~~~~s~~~~~l~-s~s~d~~i~iwd~ 217 (239)
=+..+ ..+.....++++++...... +. .+.++.. .=....|+|||++++ ++...|...||-+
T Consensus 309 ~~~~~---~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 309 ADAGG---YKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp ---------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred ccccc---ceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 11111 01112223555665542211 11 1111111 124679999999765 5556777776644
No 441
>PHA03098 kelch-like protein; Provisional
Probab=93.34 E-value=3.9 Score=34.34 Aligned_cols=59 Identities=24% Similarity=0.238 Sum_probs=32.2
Q ss_pred CCCEEEEeeCCC------eEEEEeCCCCCceeeecC--CCCEEEEEEecCCcEEEEeC-C-----CcEEEEEcc
Q psy11036 54 SSDIVISGSYDK------TVNVYDTRSPDPVMSVNH--GSPVESVLCLPSGGIFVTGG-G-----LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~dg------~v~vw~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~ 113 (239)
++.+++.|+.++ .+..||..+.+....-.. ...-.+++ .-++..++.|+ + ..+..||..
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~ 366 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVT-VFNNRIYVIGGIYNSISLNTVESWKPG 366 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEE-EECCEEEEEeCCCCCEecceEEEEcCC
Confidence 556777777543 567888877654322111 11111222 23567777777 3 346778876
No 442
>KOG4499|consensus
Probab=93.32 E-value=2.4 Score=31.16 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCEEEEEEecCCcEEEEeC--CCcEEEEEccC-CC-----eEEEEEec----cCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 85 SPVESVLCLPSGGIFVTGG--GLDVCIWDMLG-GG-----KLLHKFTC----HHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~-~~-----~~~~~~~~----~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
.--+.++|+.+.+.+.... +-+|.-||..- ++ +.+..++. ....--.++...+|++.+++-..++|..
T Consensus 158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~ 237 (310)
T KOG4499|consen 158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQK 237 (310)
T ss_pred cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEE
Confidence 3346788998888777766 46676677321 22 22222221 0111233445567777777777777777
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
.|.. +++.+.+++-....|++++|--
T Consensus 238 ~dp~--------------------tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 238 VDPT--------------------TGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred ECCC--------------------CCcEEEEEEcCCCceEEEEecC
Confidence 7766 4666777677788899999963
No 443
>PHA02790 Kelch-like protein; Provisional
Probab=93.31 E-value=4.1 Score=33.80 Aligned_cols=60 Identities=13% Similarity=0.090 Sum_probs=33.5
Q ss_pred CCCEEEEeeCC--CeEEEEeCCCCCceeeecCCCCE-EEEEEecCCcEEEEeC-C---CcEEEEEcc
Q psy11036 54 SSDIVISGSYD--KTVNVYDTRSPDPVMSVNHGSPV-ESVLCLPSGGIFVTGG-G---LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~d--g~v~vw~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~-~---~~i~~~d~~ 113 (239)
++.+.+.|+.+ ..+..||..+++....-....+. ......-+++..+.|+ + ..+..||.+
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~ 384 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPN 384 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCC
Confidence 67788888864 35788887665433221211111 1112223577777777 3 347788876
No 444
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=93.25 E-value=0.44 Score=24.09 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=25.2
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLC 92 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~ 92 (239)
+.++++...+++|.++|..+++.+..+........+.+
T Consensus 4 ~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 4 TKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 33455555688999999988887777754444444444
No 445
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.21 E-value=3.2 Score=33.58 Aligned_cols=38 Identities=16% Similarity=-0.056 Sum_probs=32.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
..+.+++.+| ++++.++...=|.|.++|+.++..++.+
T Consensus 308 R~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrmW 345 (415)
T PF14655_consen 308 REGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRMW 345 (415)
T ss_pred ceEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhhh
Confidence 6789999999 7888888777799999999998877666
No 446
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.80 E-value=0.99 Score=31.60 Aligned_cols=29 Identities=17% Similarity=0.185 Sum_probs=23.8
Q ss_pred ceEEEEEcCCC------CEEEEEecCCeEEEEEcc
Q psy11036 128 TVTSLCLASGG------KRLISASLDHHAKIYEMT 156 (239)
Q Consensus 128 ~i~~i~~~~~~------~~l~~~~~d~~i~i~d~~ 156 (239)
.+..++|+|.| -.|++.+.++.+.||...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 78899999955 268888899999999765
No 447
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=92.64 E-value=3.6 Score=31.37 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=60.3
Q ss_pred CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe------cCCeEEEEEcccceEeeeecceeEEEEEccCCC
Q psy11036 105 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS------LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG 178 (239)
Q Consensus 105 ~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~ 178 (239)
..|++||.. ..+-...-.+-.+.|+.+.|..+.+.++.|. ....+..||+..+.
T Consensus 16 ~~lC~yd~~-~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~------------------- 75 (281)
T PF12768_consen 16 PGLCLYDTD-NSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT------------------- 75 (281)
T ss_pred CEEEEEECC-CCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-------------------
Confidence 459999987 4444433344667899999986666666654 23345555555221
Q ss_pred EEEEEEec-----ccCcEEEEEEcc-CC-CeEEEEc-C--CceEEEEEccCCeeeEE--ecCCCCeeeeEe
Q psy11036 179 KLLHKFTC-----HHKTVTSLCLAS-GG-KRLISAS-L--DHHAKIYEMVNFSPVHT--LDYPSPVLSIDV 237 (239)
Q Consensus 179 ~~~~~~~~-----h~~~v~~~~~s~-~~-~~l~s~s-~--d~~i~iwd~~~~~~~~~--~~~~~~v~~~~~ 237 (239)
...+.+ -.++|..+.+.. |+ ++.+.|. . +..|..||=.++..+.. +.....|..+.+
T Consensus 76 --w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~ 144 (281)
T PF12768_consen 76 --WSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQV 144 (281)
T ss_pred --eeecCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEE
Confidence 111222 135677776643 33 3343332 2 33567777666655554 223345655554
No 448
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=92.50 E-value=0.53 Score=23.47 Aligned_cols=30 Identities=10% Similarity=0.046 Sum_probs=24.8
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEecCCCC
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 231 (239)
.++.++.||.|.-.|.++|+.+.+++....
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~ 31 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTGPP 31 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESSSG
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCCCC
Confidence 355568999999999999999999885543
No 449
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.50 E-value=1.4 Score=27.03 Aligned_cols=43 Identities=12% Similarity=0.121 Sum_probs=31.0
Q ss_pred eeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC
Q psy11036 61 GSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG 103 (239)
Q Consensus 61 ~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 103 (239)
+..+|.+..||..+++....+..-.-.+.++.++++..++++.
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEe
Confidence 4556889999999887655554445678999999999888887
No 450
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=92.41 E-value=2.2 Score=28.33 Aligned_cols=114 Identities=11% Similarity=0.082 Sum_probs=63.6
Q ss_pred EEEecCCcEEEEeC-CCcEEEEEccCCC-------eEEEEEeccCCceEEEEEcC----C-CCEEEEEecCCeEEEEEcc
Q psy11036 90 VLCLPSGGIFVTGG-GLDVCIWDMLGGG-------KLLHKFTCHHKTVTSLCLAS----G-GKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 90 ~~~~~~~~~l~~~~-~~~i~~~d~~~~~-------~~~~~~~~~~~~i~~i~~~~----~-~~~l~~~~~d~~i~i~d~~ 156 (239)
-+|......|+++. .+.|.|++..... ..+..+. -...|++++-.+ + ...|+.| ....+..||+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~ 81 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVE 81 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcc
Confidence 45666666777777 6899999876322 1233333 456677776543 2 2345555 45567777776
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc---cCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA---SGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s---~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
+..... ++.-...|.++.+- ....-|+..+.+..|.-||.+-.+...+.
T Consensus 82 -------------------~N~d~F--yke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 82 -------------------NNSDLF--YKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred -------------------cCchhh--hhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence 111111 12223456666553 22234555556788888888666665543
No 451
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=92.25 E-value=1.2 Score=38.58 Aligned_cols=90 Identities=9% Similarity=0.007 Sum_probs=54.7
Q ss_pred EEEEecCCCCEEEEeeCCC-----eEEEEeC---CCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeE
Q psy11036 47 AGTVSPVSSDIVISGSYDK-----TVNVYDT---RSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL 118 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg-----~v~vw~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~ 118 (239)
-+.|-| .|..+++-+.|| .|..+.- +-|+.-...+....+...+|+-....++++..+.+.+|-.. +..-
T Consensus 251 ~LSWkp-qgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttk-NyhW 328 (1243)
T COG5290 251 QLSWKP-QGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTK-NYHW 328 (1243)
T ss_pred cccccc-CCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEcc-ceEE
Confidence 378999 688888876554 3444442 22333233345566777888777777777778889999876 3332
Q ss_pred EEEEeccCCceEEEEEcCCC
Q psy11036 119 LHKFTCHHKTVTSLCLASGG 138 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~ 138 (239)
.-+..-.-..+.-+.|+|..
T Consensus 329 YLK~e~~ip~~s~vkwhpe~ 348 (1243)
T COG5290 329 YLKVERQIPGISYVKWHPEE 348 (1243)
T ss_pred EEEEeecCCCcceeeecccc
Confidence 22222233445667777754
No 452
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=92.04 E-value=8.3 Score=34.18 Aligned_cols=111 Identities=6% Similarity=-0.002 Sum_probs=73.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----ceeee--cCCCC----------EEEEEEecCCcEEEEeCCCc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD----PVMSV--NHGSP----------VESVLCLPSGGIFVTGGGLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~----~~~~~--~~~~~----------v~~~~~~~~~~~l~~~~~~~ 106 (239)
.+...++|+|.+...||.....|...||++.... ....+ ...+. -..+.|.++...|++.+...
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~ 225 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSK 225 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCc
Confidence 5677999999878899999999999999992111 11111 11222 23788988888999999899
Q ss_pred EEEEEccCCCeEEE--EEeccCCceEEEEEcCCC--CEEEEEecCCeEEEEEcc
Q psy11036 107 VCIWDMLGGGKLLH--KFTCHHKTVTSLCLASGG--KRLISASLDHHAKIYEMT 156 (239)
Q Consensus 107 i~~~d~~~~~~~~~--~~~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~i~d~~ 156 (239)
+.++|++ ...... ........|..+.-+|.. ..++. ....|...++.
T Consensus 226 l~~~d~~-~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL--Ts~eiiw~~~~ 276 (765)
T PF10214_consen 226 LMLIDFE-SNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL--TSKEIIWLDVK 276 (765)
T ss_pred eEEEECC-CCCccchhccCCChhheeeEEecCCccceEEEE--ecCeEEEEEcc
Confidence 9999998 333322 112234578888888862 33332 23566666666
No 453
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=91.96 E-value=4 Score=30.36 Aligned_cols=145 Identities=17% Similarity=0.157 Sum_probs=74.9
Q ss_pred EEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--C--CcEEEEEccC---CCeEEE---EEeccCCceEEEEEc
Q psy11036 67 VNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--G--LDVCIWDMLG---GGKLLH---KFTCHHKTVTSLCLA 135 (239)
Q Consensus 67 v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~--~~i~~~d~~~---~~~~~~---~~~~~~~~i~~i~~~ 135 (239)
-.+||+.+++....- ....-+.+-.+.++|+++.+|+ + ..+++++... ...... .+. ...---....-
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYpT~~~L 126 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYPTATTL 126 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccccceEC
Confidence 347898887643221 2222233345678999999998 3 4588888652 011111 111 11222234445
Q ss_pred CCCCEEEEEecCCe-EEEEEcccceEeeeecceeEEEEEccCCCEEEEEE--ecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 136 SGGKRLISASLDHH-AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF--TCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 136 ~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
|||+.|+.|+.+.. ..+|.-+.. .....-+.. +... .....--.-+...|+|++++.+..+ -
T Consensus 127 ~DG~vlIvGG~~~~t~E~~P~~~~-------~~~~~~~~~------l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s 191 (243)
T PF07250_consen 127 PDGRVLIVGGSNNPTYEFWPPKGP-------GPGPVTLPF------LSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--S 191 (243)
T ss_pred CCCCEEEEeCcCCCcccccCCccC-------CCCceeeec------chhhhccCccccCceEEEcCCCCEEEEEcCC--c
Confidence 79999999888742 223322100 000000000 0000 0011112345678999999888765 4
Q ss_pred EEEEccCCeeeEEec
Q psy11036 213 KIYEMVNFSPVHTLD 227 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~ 227 (239)
.|||..+.+.++.+.
T Consensus 192 ~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 192 IIYDYKTNTVVRTLP 206 (243)
T ss_pred EEEeCCCCeEEeeCC
Confidence 567888887777765
No 454
>KOG1983|consensus
Probab=91.93 E-value=2.9 Score=37.91 Aligned_cols=31 Identities=13% Similarity=0.296 Sum_probs=25.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
.....++|+| ...+++.+..+|.++++-...
T Consensus 36 ~~~~~~afD~-~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 36 STPSALAFDP-TQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCCcceeecc-ccceEEEEEecccEEEecccc
Confidence 3456789999 789999999999999998653
No 455
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=91.80 E-value=2.3 Score=34.59 Aligned_cols=29 Identities=7% Similarity=0.299 Sum_probs=23.8
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 128 TVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 128 ~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.|..++..+..+.+++...++.|.+|++.
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~ 219 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLG 219 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEe
Confidence 38888888888899999999999999997
No 456
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=91.37 E-value=0.76 Score=21.77 Aligned_cols=25 Identities=12% Similarity=-0.039 Sum_probs=21.2
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
.++.++.+|.+..+|.++|+.+.++
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5777888999999999999987654
No 457
>KOG1900|consensus
Probab=91.36 E-value=4 Score=37.41 Aligned_cols=154 Identities=12% Similarity=0.183 Sum_probs=85.7
Q ss_pred eCCCeEEEEeCCCCCceeee-cCCCCEEEEEEe--------cCCc-EEEEeCCCcEEEEEccC---CCe-----EEEEEe
Q psy11036 62 SYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL--------PSGG-IFVTGGGLDVCIWDMLG---GGK-----LLHKFT 123 (239)
Q Consensus 62 ~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~--------~~~~-~l~~~~~~~i~~~d~~~---~~~-----~~~~~~ 123 (239)
+-|..+.+|+.+++.....+ +....|..+..- |.=+ .|+.+.--.|.++-+.. ++. ...++.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 45788999999987666666 344455554432 2222 44444455566654421 111 002222
Q ss_pred ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCC-----CEEEEEE-ecccCcEEEEEEc
Q psy11036 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG-----GKLLHKF-TCHHKTVTSLCLA 197 (239)
Q Consensus 124 ~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~-----~~~~~~~-~~h~~~v~~~~~s 197 (239)
.....|.++....+|+.+.+| .|| .+|.+..+....+-+.. .+..++... -..+..+ ..+..+|..++..
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~r-c~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID 251 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSR-CRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITID 251 (1311)
T ss_pred cCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcc-cccccCchhHHHHhhhhhhcCCCCCCCcceeeEec
Confidence 335578889877888877776 555 45655411111110000 000000000 0001122 2567799999998
Q ss_pred cCCCeEEEEcCCceEEEEEccC
Q psy11036 198 SGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.....|.+-+..|+|.+||+..
T Consensus 252 ~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 252 NSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred cccceeeeeccCceEEEEEccC
Confidence 8888999999999999999965
No 458
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=91.32 E-value=5.4 Score=30.58 Aligned_cols=141 Identities=9% Similarity=0.102 Sum_probs=77.9
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC-----CEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS-----DIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
-.|.+||+.+++.++++.-+... ....+.+..+.+...++ ...++=+..+-+.|+|+.+++..+.+.
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~--------~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~ 105 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDI--------APPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLH 105 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCC--------S-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEET
T ss_pred cEEEEEECCCCcEEEEEECChHH--------cccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEec
Confidence 37888999999988887655411 11236788888887332 233444445689999999887554431
Q ss_pred --------------------CCCCEEEEEEec---CCcEEEEeCCCcEEEEEccC-----C--------CeEEEEEeccC
Q psy11036 83 --------------------HGSPVESVLCLP---SGGIFVTGGGLDVCIWDMLG-----G--------GKLLHKFTCHH 126 (239)
Q Consensus 83 --------------------~~~~v~~~~~~~---~~~~l~~~~~~~i~~~d~~~-----~--------~~~~~~~~~~~ 126 (239)
....+..++.+| +++.|+-..-..-++|.+.. . ...++.+-...
T Consensus 106 ~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~ 185 (287)
T PF03022_consen 106 NSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDLGDKG 185 (287)
T ss_dssp CGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE--
T ss_pred CCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceeccccC
Confidence 112244555544 44455544311122332210 0 01112221112
Q ss_pred CceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 127 KTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 127 ~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.....++.+++|..+++--..+.|..|+..
T Consensus 186 ~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~ 215 (287)
T PF03022_consen 186 SQSDGMAIDPNGNLYFTDVEQNAIGCWDPD 215 (287)
T ss_dssp -SECEEEEETTTEEEEEECCCTEEEEEETT
T ss_pred CCCceEEECCCCcEEEecCCCCeEEEEeCC
Confidence 355678888888888888888889888877
No 459
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=90.95 E-value=5.2 Score=29.77 Aligned_cols=105 Identities=18% Similarity=0.309 Sum_probs=56.9
Q ss_pred EEecCCCCEEEEeeCC---CeEEEEeCCC----CCcee---eecCCCCEEEEEEecCCcEEEEeCC--CcEEEEEccCCC
Q psy11036 49 TVSPVSSDIVISGSYD---KTVNVYDTRS----PDPVM---SVNHGSPVESVLCLPSGGIFVTGGG--LDVCIWDMLGGG 116 (239)
Q Consensus 49 ~~~~~~~~~l~s~~~d---g~v~vw~~~~----~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~--~~i~~~d~~~~~ 116 (239)
.+.+ +|+++.+|+.. ..+++++..+ ..... .+.....=-....-|||+.++.|+. ....+|..+...
T Consensus 73 ~~L~-dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~ 151 (243)
T PF07250_consen 73 AFLP-DGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPG 151 (243)
T ss_pred CCCC-CCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccCC
Confidence 4456 78888888752 3577887654 11111 1222233334455679999999983 445666543111
Q ss_pred eEEEE---Eec-----cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 117 KLLHK---FTC-----HHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 117 ~~~~~---~~~-----~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..... +.. ...----+-..|+|+.++.+..+.. |||..
T Consensus 152 ~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~--i~d~~ 197 (243)
T PF07250_consen 152 PGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSI--IYDYK 197 (243)
T ss_pred CCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcE--EEeCC
Confidence 11111 110 0111224556789999988876554 55766
No 460
>KOG3616|consensus
Probab=90.91 E-value=5.4 Score=34.65 Aligned_cols=130 Identities=12% Similarity=0.202 Sum_probs=71.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~ 122 (239)
..++++.-+| +++-++.+..||.+++|+..............+-..+.|...| ++...+|..+.-|.-. +-..+.+
T Consensus 15 e~~~aiqshp-~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhg-l~~~tsdrr~la~~~d--gvvqqqf 90 (1636)
T KOG3616|consen 15 EFTTAIQSHP-GGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHG-LVTATSDRRALAWKED--GVVQQQF 90 (1636)
T ss_pred ceeeeeeecC-CCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccc-eEEEeccchhheeecc--Ccchhhc
Confidence 5688899899 8999999999999999998655432222223344455565444 3333446666667543 3222222
Q ss_pred ec---cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-------cceEeeeecceeEEEEEccCC
Q psy11036 123 TC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMT-------LKTVSSFTGGLDVCIWDMLGG 177 (239)
Q Consensus 123 ~~---~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~i~~~d~~~~ 177 (239)
.. ......++...|..+. ++|..-|-|.-+|.- .+.-.++.+...+.+-|+.++
T Consensus 91 dyndqsekefss~~cdptaqn-vvgtlcggv~q~dcclrr~i~knkfe~tyv~pshvilkdlsn~ 154 (1636)
T KOG3616|consen 91 DYNDQSEKEFSSILCDPTAQN-VVGTLCGGVEQFDCCLRRGILKNKFELTYVAPSHVILKDLSND 154 (1636)
T ss_pred cccchhhhhccceecCchhhh-hhhhhccceeeehHHHHhHHHhccceeEEeccceeeeecccCC
Confidence 21 1123344545554332 233334445545432 223334456666777776654
No 461
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=90.71 E-value=2.3 Score=34.40 Aligned_cols=156 Identities=14% Similarity=0.108 Sum_probs=82.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce-eee-c-CCC----CEE-EEEEecCCcEEEEeC-CCcEEEE-Ec
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSV-N-HGS----PVE-SVLCLPSGGIFVTGG-GLDVCIW-DM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~-~~~-~-~~~----~v~-~~~~~~~~~~l~~~~-~~~i~~~-d~ 112 (239)
..|..+-..| +++.+..-+. .++.++++.+.... +++ . .++ .|+ ++..-..|..+.++. ||-|.-| |.
T Consensus 221 ~~v~qllL~P-dg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdv 298 (733)
T COG4590 221 SDVSQLLLTP-DGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDV 298 (733)
T ss_pred cchHhhEECC-CCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeee
Confidence 7788889999 6776655443 57888887654322 122 1 122 121 111122344455555 7777655 66
Q ss_pred cCCCeEE-E---EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 113 LGGGKLL-H---KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 113 ~~~~~~~-~---~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
+..+.+. . .++-...++.-+.-..+.+-+++-+..|++.++... .+...-++.-.
T Consensus 299 r~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st---------------------~~~~lL~~~~~ 357 (733)
T COG4590 299 RRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYST---------------------SEKLLLFERAY 357 (733)
T ss_pred ecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecc---------------------cCcceehhhhh
Confidence 5433311 1 111111222222222223446666666666555433 11111112223
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
..+..+++||++.+|++- ..|.++++.+++..+
T Consensus 358 ~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P 390 (733)
T COG4590 358 QAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRNP 390 (733)
T ss_pred cCcceeeeCcccchheee-cCCceEEEEecCCCC
Confidence 456778999999999865 457899998877544
No 462
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=90.29 E-value=7.5 Score=30.50 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=54.9
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeee-----cCCCCEEEEEEecC---CcEEEEe-C-C------
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---VMSV-----NHGSPVESVLCLPS---GGIFVTG-G-G------ 104 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---~~~~-----~~~~~v~~~~~~~~---~~~l~~~-~-~------ 104 (239)
..+.|+|.| +++++++ ...|.|++++ ..+.. +..+ ........++++|+ ..++.+. . .
T Consensus 3 ~P~~~a~~p-dG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLP-DGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEET-TSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeC-CCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 467999999 6777765 5699999999 33332 2222 24567899999994 2333332 2 1
Q ss_pred --CcEEEEEccCC-------CeEEEEEec---cCCceEEEEEcCCCCEEEEEec
Q psy11036 105 --LDVCIWDMLGG-------GKLLHKFTC---HHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 105 --~~i~~~d~~~~-------~~~~~~~~~---~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
..|.-|..... ...+..+.. ....-..|.|.|||.+.++.+.
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 23444444322 111222222 2334567999999977666554
No 463
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=90.09 E-value=13 Score=32.98 Aligned_cols=129 Identities=8% Similarity=0.087 Sum_probs=78.4
Q ss_pred cCCCCEEEEEEe---c----CCcEEEEeCCCcEEEEEcc------CC--------CeEEEEEec---cCCceEEEEEcC-
Q psy11036 82 NHGSPVESVLCL---P----SGGIFVTGGGLDVCIWDML------GG--------GKLLHKFTC---HHKTVTSLCLAS- 136 (239)
Q Consensus 82 ~~~~~v~~~~~~---~----~~~~l~~~~~~~i~~~d~~------~~--------~~~~~~~~~---~~~~i~~i~~~~- 136 (239)
....+|..|+|. . ..++|++-....+.|+... .. ..++..+.. ...+...++|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~ 156 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW 156 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence 467889999988 2 2347777777777777722 00 123333432 234778999999
Q ss_pred CCCEEEEEecCCeEEEEEcc-c----ceEeeeecceeEEE-EEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 137 GGKRLISASLDHHAKIYEMT-L----KTVSSFTGGLDVCI-WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 137 ~~~~l~~~~~d~~i~i~d~~-~----~~~~~~~~~~~i~~-~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
+.+.||.....|...||++. . .....+.......+ +|... ...-..+.|.++...|+.++ ..
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e-----------~s~w~rI~W~~~~~~lLv~~-r~ 224 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEE-----------LSNWKRILWVSDSNRLLVCN-RS 224 (765)
T ss_pred ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcc-----------cCcceeeEecCCCCEEEEEc-CC
Confidence 45789999999999999993 1 11111111100111 22111 13455788988877777775 45
Q ss_pred eEEEEEccCCee
Q psy11036 211 HAKIYEMVNFSP 222 (239)
Q Consensus 211 ~i~iwd~~~~~~ 222 (239)
.+.++|+++...
T Consensus 225 ~l~~~d~~~~~~ 236 (765)
T PF10214_consen 225 KLMLIDFESNWQ 236 (765)
T ss_pred ceEEEECCCCCc
Confidence 788888887655
No 464
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=89.33 E-value=4.7 Score=35.71 Aligned_cols=79 Identities=14% Similarity=0.141 Sum_probs=58.2
Q ss_pred CCeEEEEeCCCCCceee-ecCCCCEEEEEEecCCcEEEE-eC-CC-----cEEEEEccCCCeEEEEEeccCCceEEEEEc
Q psy11036 64 DKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVT-GG-GL-----DVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 135 (239)
Q Consensus 64 dg~v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~-~~-~~-----~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~ 135 (239)
.+.|.+-|.....+... +.+..++..-+|+|+|+.++- .+ ++ .|.+-+++..+..+.++.-.+..|..-...
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~ 407 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVL 407 (912)
T ss_pred CCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEec
Confidence 35788888876666655 678889999999999999987 43 23 388889987666666666666777777777
Q ss_pred CCCCEEE
Q psy11036 136 SGGKRLI 142 (239)
Q Consensus 136 ~~~~~l~ 142 (239)
++|...+
T Consensus 408 e~gdt~i 414 (912)
T TIGR02171 408 ENGDTVI 414 (912)
T ss_pred CCCCeEE
Confidence 7776433
No 465
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=89.10 E-value=5.4 Score=27.91 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=25.1
Q ss_pred CcEEEEEEccCC------CeEEEEcCCceEEEEEcc
Q psy11036 189 KTVTSLCLASGG------KRLISASLDHHAKIYEMV 218 (239)
Q Consensus 189 ~~v~~~~~s~~~------~~l~s~s~d~~i~iwd~~ 218 (239)
..+..++|||.| -+|++...++.|.||...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 378999999943 478899999999999865
No 466
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=88.88 E-value=11 Score=30.58 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=98.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-----------
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS----------- 74 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~----------- 74 (239)
-||.+.+++-+.....+.+... --.-.+.|.+ ..+.+++++.+..+..|....
T Consensus 153 ~DG~L~~feqe~~~f~~~lp~~---------------llPgPl~Y~~-~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~ 216 (418)
T PF14727_consen 153 MDGSLSFFEQESFAFSRFLPDF---------------LLPGPLCYCP-RTDSFVTASSSWTLECYKYQDLASASEASSRQ 216 (418)
T ss_pred cCceEEEEeCCcEEEEEEcCCC---------------CCCcCeEEee-cCCEEEEecCceeEEEecHHHhhhcccccccc
Confidence 4688888886555444444442 2223567888 678888888888898886421
Q ss_pred ---------CC---ceeeecCCCCEEEEEEe---cCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEE-EcC--
Q psy11036 75 ---------PD---PVMSVNHGSPVESVLCL---PSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC-LAS-- 136 (239)
Q Consensus 75 ---------~~---~~~~~~~~~~v~~~~~~---~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~-~~~-- 136 (239)
++ +..++.-.+.+..+..- .....+++-+...+.+.+. .+......+ ......+++ +..
T Consensus 217 ~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLger~Lf~l~~--~G~l~~~kr-Ld~~p~~~~~Y~~~~ 293 (418)
T PF14727_consen 217 SGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGERSLFCLKD--NGSLRFQKR-LDYNPSCFCPYRVPW 293 (418)
T ss_pred ccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEecceEEEEcC--CCeEEEEEe-cCCceeeEEEEEeec
Confidence 11 11222344555555443 3455666777777777766 454433333 233323332 211
Q ss_pred --CC---CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE--EEEEEccCCCeEEEEcCC
Q psy11036 137 --GG---KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV--TSLCLASGGKRLISASLD 209 (239)
Q Consensus 137 --~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v--~~~~~s~~~~~l~s~s~d 209 (239)
++ ..++.++.++++.||.=. -.+|.... ...+| .-..|..-...|++-+.+
T Consensus 294 ~~~~~~~~~llV~t~t~~LlVy~d~------------~L~WsA~l----------~~~PVal~v~~~~~~~G~IV~Ls~~ 351 (418)
T PF14727_consen 294 YNEPSTRLNLLVGTHTGTLLVYEDT------------TLVWSAQL----------PHVPVALSVANFNGLKGLIVSLSDE 351 (418)
T ss_pred ccCCCCceEEEEEecCCeEEEEeCC------------eEEEecCC----------CCCCEEEEecccCCCCceEEEEcCC
Confidence 22 248888999999998632 23333322 22222 222233335578888889
Q ss_pred ceEEEEEccCCee
Q psy11036 210 HHAKIYEMVNFSP 222 (239)
Q Consensus 210 ~~i~iwd~~~~~~ 222 (239)
|.+.+-=+.|.-.
T Consensus 352 G~L~v~YLGTdPs 364 (418)
T PF14727_consen 352 GQLSVSYLGTDPS 364 (418)
T ss_pred CcEEEEEeCCCCc
Confidence 9988876655433
No 467
>KOG1898|consensus
Probab=87.98 E-value=21 Score=32.48 Aligned_cols=133 Identities=18% Similarity=0.179 Sum_probs=75.5
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC-EEEEee-----------CCCeEEEEeCC-CC
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD-IVISGS-----------YDKTVNVYDTR-SP 75 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-----------~dg~v~vw~~~-~~ 75 (239)
.|++.|..+++.+..+..... ...-.+..+.|+..+.. +++++. .+|.++.|++- .+
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~n----------e~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g 923 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQN----------EAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNG 923 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCC----------cchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecC
Confidence 588888888877666554431 00024556666652222 333322 23456666653 33
Q ss_pred Cceeee---cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 76 DPVMSV---NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 76 ~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
+.+.-+ .-.+++. +..|...++.+|-...+++||+- .+++++... .-...|+.+.+ .+..+++|...-.+
T Consensus 924 ~~lellh~T~~~~~v~--Ai~~f~~~~LagvG~~l~~YdlG-~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV 998 (1205)
T KOG1898|consen 924 DKLELLHKTEIPGPVG--AICPFQGRVLAGVGRFLRLYDLG-KKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESV 998 (1205)
T ss_pred ceeeeeeccCCCccce--EEeccCCEEEEecccEEEEeeCC-hHHHHhhhhhccCceEEEEEee--cceEEEEeeccceE
Confidence 322222 2344454 44666667877778899999996 444443332 22456677766 46678888777667
Q ss_pred EEEEcc
Q psy11036 151 KIYEMT 156 (239)
Q Consensus 151 ~i~d~~ 156 (239)
..+-.+
T Consensus 999 ~~~~y~ 1004 (1205)
T KOG1898|consen 999 HFVRYR 1004 (1205)
T ss_pred EEEEEe
Confidence 665555
No 468
>PRK13684 Ycf48-like protein; Provisional
Probab=87.97 E-value=11 Score=29.54 Aligned_cols=108 Identities=9% Similarity=0.011 Sum_probs=62.5
Q ss_pred CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
....+.++.+.|++.+++++..|.+..- .+..++...... .-...++.+.+.++++.++++ ..|.+++=..+
T Consensus 171 ~~g~~~~i~~~~~g~~v~~g~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d----- 243 (334)
T PRK13684 171 AAGVVRNLRRSPDGKYVAVSSRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPD----- 243 (334)
T ss_pred CcceEEEEEECCCCeEEEEeCCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCC-----
Confidence 3457889999999888877777766532 111233232222 334678999999998876665 56765432222
Q ss_pred eeecceeEEEEEccCCCEEEEEEec----ccCcEEEEEEccCCCeEEEEcCCceEE
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTC----HHKTVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
.+..-..... ....+..+.+.|++..++++ .+|.+.
T Consensus 244 ---------------~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~ 283 (334)
T PRK13684 244 ---------------DLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL 283 (334)
T ss_pred ---------------CCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE
Confidence 1111110010 12357788899887766544 567554
No 469
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.77 E-value=2.2 Score=21.13 Aligned_cols=32 Identities=22% Similarity=0.161 Sum_probs=19.8
Q ss_pred EeccCCceEEEEEcCCCCEEEEEec-C--CeEEEE
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASL-D--HHAKIY 153 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~-d--~~i~i~ 153 (239)
+......-....|+|||+.|+-++. + |...||
T Consensus 4 ~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 4 LTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp ES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3334556778999999998876654 3 444443
No 470
>KOG1897|consensus
Probab=87.59 E-value=21 Score=32.16 Aligned_cols=149 Identities=10% Similarity=0.066 Sum_probs=79.3
Q ss_pred EEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC
Q psy11036 48 GTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH 126 (239)
Q Consensus 48 ~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~ 126 (239)
+..+...++.|+-... ..||+++-. .....+..++.++....+.+...++.++ ++.+...++...+-....-+...
T Consensus 454 if~S~i~g~~lvQvTs-~~iRl~ss~--~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e 530 (1096)
T KOG1897|consen 454 IFCSTINGNQLVQVTS-NSIRLVSSA--GLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFE 530 (1096)
T ss_pred EEEEccCCceEEEEec-ccEEEEcch--hhhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheec
Confidence 3333333444433333 346776644 2333344555566665565665666666 57777777763331111122335
Q ss_pred CceEEEEEcCCC------CEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEc
Q psy11036 127 KTVTSLCLASGG------KRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLA 197 (239)
Q Consensus 127 ~~i~~i~~~~~~------~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s 197 (239)
..|.|+.++|-| +.++.|..+..+.+.-.. ...+ .....+.+ -...|.-.++-
T Consensus 531 ~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~------------------~~~~~l~~~~iPRSIl~~~~e 592 (1096)
T KOG1897|consen 531 YEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLIL------------------ITHEQLSGEIIPRSILLTTFE 592 (1096)
T ss_pred ceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcce------------------eeeeccCCCccchheeeEEee
Confidence 688999998743 267788776665543322 0000 00000111 12234455666
Q ss_pred cCCCeEEEEcCCceEEEEEc
Q psy11036 198 SGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~ 217 (239)
-|..+|.++..||.+.-|-+
T Consensus 593 ~d~~yLlvalgdG~l~~fv~ 612 (1096)
T KOG1897|consen 593 GDIHYLLVALGDGALLYFVL 612 (1096)
T ss_pred ccceEEEEEcCCceEEEEEE
Confidence 67889999999999876644
No 471
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=87.41 E-value=14 Score=29.90 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=66.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-----eeeec---CCCCEEEEEEecCCcEEEEeCCCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-----VMSVN---HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-----~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~ 114 (239)
..++.+.+.+ ++.+++++ .+|.+. +....++. ..... ....+..+.+.+++..+++|..|.+....-
T Consensus 281 ~~l~~v~~~~-dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~D-- 355 (398)
T PLN00033 281 RRIQNMGWRA-DGGLWLLT-RGGGLY-VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRSTD-- 355 (398)
T ss_pred cceeeeeEcC-CCCEEEEe-CCceEE-EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeCC--
Confidence 5688999988 67776655 556653 34444431 22222 223589999999999888888887766532
Q ss_pred CCeEEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 115 GGKLLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 115 ~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
.++...... .-......+.|.++++.+++| .+|.|.-|
T Consensus 356 ~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 356 GGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred CCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 444444333 234568899987776666555 67766443
No 472
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=87.13 E-value=17 Score=30.48 Aligned_cols=193 Identities=12% Similarity=0.085 Sum_probs=85.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeeecCCCCEEEEEEecC----C-------cEEEEeC---CCc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK--TVNVYDTRSPDPVMSVNHGSPVESVLCLPS----G-------GIFVTGG---GLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~----~-------~~l~~~~---~~~ 106 (239)
....++.+...++.+++.|+.-| .+.-+....-+.+..+..-+||..++.-+. . +.+++++ +|.
T Consensus 256 ~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gs 335 (504)
T PF10433_consen 256 SIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGS 335 (504)
T ss_dssp S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE----SEEEEEEE-TSSSSS-------EEEEEESSGGG-E
T ss_pred ChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccCcCCccceEEeccccCCCCcccccceEEEEECcCCCCc
Confidence 44556777652224777777655 444455344445556677889999988632 1 3445444 478
Q ss_pred EEEEEccCCCe-EEEEEeccCC--ceEEEEEcC-CCCEEEEEecCCeEEEEEcc----cceEee-----e----------
Q psy11036 107 VCIWDMLGGGK-LLHKFTCHHK--TVTSLCLAS-GGKRLISASLDHHAKIYEMT----LKTVSS-----F---------- 163 (239)
Q Consensus 107 i~~~d~~~~~~-~~~~~~~~~~--~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~----~~~~~~-----~---------- 163 (239)
+++..---.-+ .........+ .+..+.... +..+|+....+ .-+++.+. .+.+.. +
T Consensus 336 L~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~ 414 (504)
T PF10433_consen 336 LRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAG 414 (504)
T ss_dssp EEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEE
T ss_pred EEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEE
Confidence 88874321111 0111111222 233333222 13455555443 33444442 222211 1
Q ss_pred -e--------cceeEEEEEccCCCEEEEEEe-cccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec------
Q psy11036 164 -T--------GGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD------ 227 (239)
Q Consensus 164 -~--------~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------ 227 (239)
. ....|++.+.... +...... .....|.+.+.. +.+++.+-.++.+..+.+..........
T Consensus 415 ~~~~~~ivQVt~~~i~l~~~~~~-~~~~~w~~~~~~~I~~a~~~--~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (504)
T PF10433_consen 415 NVGDGRIVQVTPKGIRLIDLEDG-KLTQEWKPPAGSIIVAASIN--DPQVLVALSGGELVYFELDDNKISVSDNDETILE 491 (504)
T ss_dssp EETTTEEEEEESSEEEEEESSST-SEEEEEE-TTS---SEEEES--SSEEEEEE-TTEEEEEEEETTEEEEEEE----EE
T ss_pred EcCCCeEEEEecCeEEEEECCCC-eEEEEEeCCCCCeEEEEEEC--CCEEEEEEeCCcEEEEEEECCceeeeeecccccc
Confidence 0 1122555554432 2222221 223445555443 4456666668889999987776643322
Q ss_pred CCCCeeeeEecC
Q psy11036 228 YPSPVLSIDVSM 239 (239)
Q Consensus 228 ~~~~v~~~~~sp 239 (239)
....|.++..+|
T Consensus 492 ~~~eis~l~i~p 503 (504)
T PF10433_consen 492 LDNEISCLSIEP 503 (504)
T ss_dssp -SS-EEEEE---
T ss_pred CCCceEEEEeCC
Confidence 578899998877
No 473
>PHA02790 Kelch-like protein; Provisional
Probab=87.03 E-value=16 Score=30.33 Aligned_cols=100 Identities=10% Similarity=0.036 Sum_probs=48.6
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-C--CcEEEEEccCCCeEEEEEe
Q psy11036 54 SSDIVISGSYDK-----TVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-G--LDVCIWDMLGGGKLLHKFT 123 (239)
Q Consensus 54 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~--~~i~~~d~~~~~~~~~~~~ 123 (239)
++.+++.|+.++ .+..||..+++....- .....-.+++ .-++...++|+ + ..+..||.. ..+ ...+.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~-~n~-W~~~~ 347 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHG-DAA-WVNMP 347 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECC-CCe-EEECC
Confidence 556777887653 5677888776533221 1111111222 23677777777 2 457888875 322 22222
Q ss_pred ccCCceEE-EEEcCCCCEEEEEecCC---eEEEEEcc
Q psy11036 124 CHHKTVTS-LCLASGGKRLISASLDH---HAKIYEMT 156 (239)
Q Consensus 124 ~~~~~i~~-i~~~~~~~~l~~~~~d~---~i~i~d~~ 156 (239)
.-..+... ....-+|+..+.||.++ .+..||.+
T Consensus 348 ~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~ 384 (480)
T PHA02790 348 SLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPN 384 (480)
T ss_pred CCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCC
Confidence 11111111 11122567777777553 24455544
No 474
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=86.60 E-value=2.3 Score=35.90 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=28.0
Q ss_pred CCeEEEEEec---CCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 43 DYVRAGTVSP---VSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 43 ~~v~~~~~~~---~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
..+..++.++ .+..++++-+.|+++|+||+.+++++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 3455555554 25679999999999999999999985544
No 475
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=85.80 E-value=2.4 Score=19.44 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=19.0
Q ss_pred EEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 191 VTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
...++++++|+++++=+..+.|++|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4567888888888887777777765
No 476
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=85.71 E-value=15 Score=28.71 Aligned_cols=70 Identities=11% Similarity=0.169 Sum_probs=38.6
Q ss_pred eEEEEEcCCCCEEEEEecC------CeEEEEEcccceEeeeecceeEEEEEccCCCEEEE---EEecccCcEEEEEEccC
Q psy11036 129 VTSLCLASGGKRLISASLD------HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLH---KFTCHHKTVTSLCLASG 199 (239)
Q Consensus 129 i~~i~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~h~~~v~~~~~s~~ 199 (239)
.-+|++.++|.++++.-.+ ..|.-++.+++.+..+. +.....+.. .-...+....+|+++|+
T Consensus 87 ~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~---------vP~~~~~~~~~~~~~~~N~G~E~la~~~d 157 (326)
T PF13449_consen 87 PEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFP---------VPAAFLPDANGTSGRRNNRGFEGLAVSPD 157 (326)
T ss_pred hhHeEEecCCCEEEEeCCccCCCCCCEEEEECCCCcccceEc---------cccccccccCccccccCCCCeEEEEECCC
Confidence 3467776677776666555 66766666544333330 000000000 11224567899999999
Q ss_pred CCeEEEEc
Q psy11036 200 GKRLISAS 207 (239)
Q Consensus 200 ~~~l~s~s 207 (239)
|+.|+++.
T Consensus 158 G~~l~~~~ 165 (326)
T PF13449_consen 158 GRTLFAAM 165 (326)
T ss_pred CCEEEEEE
Confidence 99666553
No 477
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=84.87 E-value=21 Score=29.67 Aligned_cols=161 Identities=15% Similarity=0.128 Sum_probs=75.4
Q ss_pred CCCeEEEEeCCCCCceeeecCCC-CEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCC---ceEEEEEcCCC
Q psy11036 63 YDKTVNVYDTRSPDPVMSVNHGS-PVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK---TVTSLCLASGG 138 (239)
Q Consensus 63 ~dg~v~vw~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~i~~i~~~~~~ 138 (239)
..+...+.|.. |..+..+.... ....+...++|.+++... ..+..+|+. ++.+........ .=..+...|+|
T Consensus 126 ~~~~~~~iD~~-G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~--G~v~~~~~l~~~~~~~HHD~~~l~nG 201 (477)
T PF05935_consen 126 SSSYTYLIDNN-GDVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLL--GKVIWEYDLPGGYYDFHHDIDELPNG 201 (477)
T ss_dssp BEEEEEEEETT-S-EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT----EEEEEE--TTEE-B-S-EEE-TTS
T ss_pred CCceEEEECCC-ccEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCC--CCEEEeeecCCcccccccccEECCCC
Confidence 44566667753 54444442111 111166778888887555 778888884 555554442221 13557788999
Q ss_pred CEEEEEecCCeEEE-EE--cccceEeee-ecceeEEEEEccCCCEEEEE----------E---eccc--CcEEEEEEcc-
Q psy11036 139 KRLISASLDHHAKI-YE--MTLKTVSSF-TGGLDVCIWDMLGGGKLLHK----------F---TCHH--KTVTSLCLAS- 198 (239)
Q Consensus 139 ~~l~~~~~d~~i~i-~d--~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~----------~---~~h~--~~v~~~~~s~- 198 (239)
++|+.+.......- =+ .-...+..+ ..+.-+..||+..--.+... . .... --+.++.+.+
T Consensus 202 n~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~ 281 (477)
T PF05935_consen 202 NLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPS 281 (477)
T ss_dssp -EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETT
T ss_pred CEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCC
Confidence 99888873221110 00 001222222 12333666776542211111 0 0000 1378889988
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
++.+|+|+-.-..|...|.++++....+.
T Consensus 282 dd~iivSsR~~s~V~~Id~~t~~i~Wilg 310 (477)
T PF05935_consen 282 DDSIIVSSRHQSAVIKIDYRTGKIKWILG 310 (477)
T ss_dssp TTEEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred CCeEEEEcCcceEEEEEECCCCcEEEEeC
Confidence 66666766666688888988888877765
No 478
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=84.78 E-value=25 Score=30.41 Aligned_cols=173 Identities=12% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCCeEEEEEecCCCCEEEEeeCCCeEEEEeC----------CCCCceeeecCCCCEEEEEEecCCcEEEEeCC-----Cc
Q psy11036 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDT----------RSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-----LD 106 (239)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~ 106 (239)
++.|..+.+.+ ++..+++...+|.|.+||. -.........+..-|..........++++.++ -.
T Consensus 129 ~~kvv~Ik~~~-~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ 207 (670)
T PF10395_consen 129 DDKVVGIKFSS-DGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLS 207 (670)
T ss_pred ccceEEEEEec-CCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEE
Q ss_pred EEEEEccCCCeEEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEE
Q psy11036 107 VCIWDMLGGGKLLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLH 182 (239)
Q Consensus 107 i~~~d~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~ 182 (239)
.+++.+......+..+. .+........|.-+...|.-- .++.|.+|++. .+...++ ....
T Consensus 208 ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l-~~~~i~~ysip~f~~~~tI---------------~l~~ 271 (670)
T PF10395_consen 208 YKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL-SKKTISSYSIPNFQIQKTI---------------SLPS 271 (670)
T ss_pred EEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE-eCCEEEEEEcCCceEEEEE---------------Eech
Q ss_pred EEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCee
Q psy11036 183 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVL 233 (239)
Q Consensus 183 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~ 233 (239)
.+......+.++.--..++.|++. +..|++.|+.-...+.++....+..
T Consensus 272 ii~~~~~~~vSl~~~s~nRvLLs~--~nkIyLld~~~~siLse~~~s~~~~ 320 (670)
T PF10395_consen 272 IIDKESDDLVSLKPPSPNRVLLSV--NNKIYLLDLKFESILSEFELSHPKP 320 (670)
T ss_pred hhccccccceEeecCCCCeEEEEc--CCEEEEEeehhhhhhhhhhccCCcc
No 479
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=84.49 E-value=13 Score=33.28 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=33.5
Q ss_pred CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEE-EecCC-----eEEEEEcc
Q psy11036 105 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS-ASLDH-----HAKIYEMT 156 (239)
Q Consensus 105 ~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~d~-----~i~i~d~~ 156 (239)
+.+.+-|.. ...+...-..+..+|..-.|+|||+.|+- .+.++ .|++-+++
T Consensus 329 ~~L~~~D~d-G~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~ 385 (912)
T TIGR02171 329 GNLAYIDYT-KGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLN 385 (912)
T ss_pred CeEEEEecC-CCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehh
Confidence 578888886 32322221346889999999999999987 44443 35555554
No 480
>KOG1896|consensus
Probab=83.55 E-value=38 Score=31.47 Aligned_cols=117 Identities=12% Similarity=0.114 Sum_probs=64.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
++|..++=. .|.++.+ ....|.+|++.....+.-+. ..-++.-....--.++++.|. -..|.+.-.......+.
T Consensus 1098 GtVsavceV--~G~l~~~--~GqKI~v~~l~r~~~ligVaFiD~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~rls 1173 (1366)
T KOG1896|consen 1098 GTVSAVCEV--RGHLLSS--QGQKIIVRKLDRDSELIGVAFIDLPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYRLS 1173 (1366)
T ss_pred cceEEEEEe--ccEEEEc--cCcEEEEEEeccCCcceeeEEeccceeEEehhhhhhheehhhhhhceEEEEEccCceEEE
Confidence 778777755 3544443 33579999994443222111 111222222222244555555 35566655543344444
Q ss_pred EEeccC--CceEEEEEcCCCC--EEEEEecCCeEEEEEcccceEeee
Q psy11036 121 KFTCHH--KTVTSLCLASGGK--RLISASLDHHAKIYEMTLKTVSSF 163 (239)
Q Consensus 121 ~~~~~~--~~i~~i~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~ 163 (239)
.+.... -.+.++.|--+|. .++++..++.|+++-...+...++
T Consensus 1174 L~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~Pe~~eS~ 1220 (1366)
T KOG1896|consen 1174 LLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAPENIESL 1220 (1366)
T ss_pred EeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCCCCcccc
Confidence 333222 2567778877764 688888999999998775555555
No 481
>KOG2247|consensus
Probab=82.77 E-value=0.25 Score=39.90 Aligned_cols=107 Identities=9% Similarity=0.054 Sum_probs=71.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-eecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-SVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
+....++|..+....++.+-..+.+.+|++.+..... .++....-.-+.|++.+..++.+. .+.+.+++.. ..+.+-
T Consensus 75 g~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhg-tsR~ii 153 (615)
T KOG2247|consen 75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHG-TSRRII 153 (615)
T ss_pred hhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEecc-chhhhh
Confidence 5566788888444556667778999999997543211 112111112278899888888888 6999999987 444444
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEE
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
.+..|...++++++.+.+. .+.++.|..+.
T Consensus 154 v~Gkh~RRgtq~av~lEd~-vil~dcd~~L~ 183 (615)
T KOG2247|consen 154 VMGKHQRRGTQIAVTLEDY-VILCDCDNTLS 183 (615)
T ss_pred hhcccccceeEEEecccce-eeecCcHHHHH
Confidence 4445888999999998754 45555554433
No 482
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=82.66 E-value=16 Score=26.56 Aligned_cols=99 Identities=16% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCCEEEEeeCC--CeEEEEeCCCCCceeeecCC-CCEEEEEEecCCc--EEEEeCCCcEEEEEccCCCeEEEEEeccCCc
Q psy11036 54 SSDIVISGSYD--KTVNVYDTRSPDPVMSVNHG-SPVESVLCLPSGG--IFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128 (239)
Q Consensus 54 ~~~~l~s~~~d--g~v~vw~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 128 (239)
+++++.+.+.- ..|++||+.+++.+...... ..+..=-...-+. +..+-.++.-..+|.+ +.+.+..+. ..+.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~-t~~~lg~~~-y~Ge 132 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDAD-TLEELGRFS-YEGE 132 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChH-Hhhhhcccc-cCCc
Confidence 45677776643 47999999999877654322 1221111111133 3333347777888887 555555544 2333
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 129 VTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 129 i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
=..++ .|+..|+.+....+++.-|.+
T Consensus 133 GWgLt--~d~~~LimsdGsatL~frdP~ 158 (262)
T COG3823 133 GWGLT--SDDKNLIMSDGSATLQFRDPK 158 (262)
T ss_pred ceeee--cCCcceEeeCCceEEEecCHH
Confidence 34443 356556666555556555554
No 483
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=81.88 E-value=28 Score=28.76 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=37.2
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC-eEEEEE----e-ccCCceEEEEEcCCC
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG-KLLHKF----T-CHHKTVTSLCLASGG 138 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~-~~~~~~----~-~~~~~i~~i~~~~~~ 138 (239)
-.....|+|.|+++++++-. .|.|++++..... ..+..+ . ...+....|+++|+-
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 34568899999999888887 5999998764211 122111 1 135678999999874
No 484
>KOG3522|consensus
Probab=81.18 E-value=11 Score=33.21 Aligned_cols=145 Identities=14% Similarity=0.156 Sum_probs=82.1
Q ss_pred CEEEEeeCCCeEEEEeCCCCCc-eeee----cCCCCEEEEEEecCCcEEEEeC-CCcEEE--------EEccCCCeEEEE
Q psy11036 56 DIVISGSYDKTVNVYDTRSPDP-VMSV----NHGSPVESVLCLPSGGIFVTGG-GLDVCI--------WDMLGGGKLLHK 121 (239)
Q Consensus 56 ~~l~s~~~dg~v~vw~~~~~~~-~~~~----~~~~~v~~~~~~~~~~~l~~~~-~~~i~~--------~d~~~~~~~~~~ 121 (239)
..+..|+.++.+.++.-..+.. .... .....+.++.+++. .+..|. ||++-. ||.+ +-..
T Consensus 548 PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~--Slgagl~dgt~a~y~rap~gSwd~e----p~~~ 621 (925)
T KOG3522|consen 548 PTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG--SLGAGLIDGTLAVYGRAPSGSWDGE----PNIS 621 (925)
T ss_pred CcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc--ccccCccCCccccccCCCCCCCCCC----Cccc
Confidence 3567788888888887652221 1111 23445566665542 122121 333332 5543 2223
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 201 (239)
+.....++...++..| ++.++.+|.|.++.... .+..|+.+ ....|...|+++.+..++-
T Consensus 622 ~~~g~lPvrsla~~ed---~~was~gG~V~vi~~tt----------~~~~~~le-------ahqee~~~Vthm~~~~~gV 681 (925)
T KOG3522|consen 622 IPTGSLPVRSLAFQED---FVWASEGGCVHVIPSTT----------FIRSWDLE-------AHQEEAHSVTHMLYLDNGV 681 (925)
T ss_pred cccCCccccchhhhhc---eeeeecCCceEEEechh----------ccccchhH-------HHHhhcceEEEEEeeCCce
Confidence 3334567888887654 66778899999998760 01112211 1134567899999987777
Q ss_pred eEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 202 RLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 202 ~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+++-++.| .++.++.++..-++.++
T Consensus 682 wvafasG~-~~rlfhtetl~hlqd~n 706 (925)
T KOG3522|consen 682 WVAFASGD-EERLFHTETLWHLQDSN 706 (925)
T ss_pred EEEEcCCC-EEEEecccccCCccccc
Confidence 77766665 45555766655555544
No 485
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=80.65 E-value=25 Score=27.50 Aligned_cols=103 Identities=14% Similarity=0.263 Sum_probs=62.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCe------EEEEeCCC--C--Ccee-----ee-cCCC--------CEEEEEEecCCcE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKT------VNVYDTRS--P--DPVM-----SV-NHGS--------PVESVLCLPSGGI 98 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~------v~vw~~~~--~--~~~~-----~~-~~~~--------~v~~~~~~~~~~~ 98 (239)
+.+..+.+.+ ++..+++-+.+|. +...++.. + ..+. .+ ...+ ...++++.+++.+
T Consensus 20 GGlSgl~~~~-~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDP-DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred CcEeeEEEeC-CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 7788999997 4556666677777 55555443 1 1111 11 1111 3457888777777
Q ss_pred EEEeC-C------CcEEEEEccCCCeEEEEEe---------------ccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 99 FVTGG-G------LDVCIWDMLGGGKLLHKFT---------------CHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 99 l~~~~-~------~~i~~~d~~~~~~~~~~~~---------------~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
+++.. + ..|..++.. ++....+. ..+....+++++|+|+.|+++.+..
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~--G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~ 168 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD--GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESP 168 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC--CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcc
Confidence 77665 5 567777754 44333331 1345788999999999777765543
No 486
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=80.05 E-value=17 Score=29.76 Aligned_cols=71 Identities=8% Similarity=-0.033 Sum_probs=49.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~ 114 (239)
.++.-+.-.. +.+-+++-+..|++.++.....+....-..-....-++++|++.++++-..|.++++.+++
T Consensus 317 a~~~~l~pe~-~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e~~gki~~~~l~N 387 (733)
T COG4590 317 AEVQFLLPET-NRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLLSEDQGKIRLAQLEN 387 (733)
T ss_pred ccceeecccc-ccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchheeecCCceEEEEecC
Confidence 3444443333 4556777788899988876554443322333466778999999999988889999999873
No 487
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=79.41 E-value=31 Score=27.73 Aligned_cols=140 Identities=12% Similarity=0.112 Sum_probs=66.7
Q ss_pred eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEE-eCC----C-cEEEEEccCCCeEEEEEeccCC--ceEEEEEcCC
Q psy11036 66 TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVT-GGG----L-DVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASG 137 (239)
Q Consensus 66 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~----~-~i~~~d~~~~~~~~~~~~~~~~--~i~~i~~~~~ 137 (239)
.|.--|+.+++....+.....+..+.|+|....+++ +.. . .-++|-++..+.....+..+.. .+.-=-|.||
T Consensus 169 ~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~D 248 (386)
T PF14583_consen 169 RIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPD 248 (386)
T ss_dssp EEEEEETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TT
T ss_pred eEEEEECCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCC
Confidence 455667888877666677778889999996554444 332 2 2377877756655555543332 2333357788
Q ss_pred CCEEEEEec-CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc------
Q psy11036 138 GKRLISASL-DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH------ 210 (239)
Q Consensus 138 ~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------ 210 (239)
|..|.--+. .+. ...-|.-+|+.+..... .... .+...+-.++||++++.=+.|.
T Consensus 249 G~~i~y~~~~~~~---------------~~~~i~~~d~~t~~~~~-~~~~--p~~~H~~ss~Dg~L~vGDG~d~p~~v~~ 310 (386)
T PF14583_consen 249 GSTIWYDSYTPGG---------------QDFWIAGYDPDTGERRR-LMEM--PWCSHFMSSPDGKLFVGDGGDAPVDVAD 310 (386)
T ss_dssp SS-EEEEEEETTT-----------------EEEEEE-TTT--EEE-EEEE---SEEEEEE-TTSSEEEEEE---------
T ss_pred CCEEEEEeecCCC---------------CceEEEeeCCCCCCceE-EEeC--CceeeeEEcCCCCEEEecCCCCCccccc
Confidence 865543221 110 01114444554432221 1111 2344666788999877544432
Q ss_pred ----------eEEEEEccCCeee
Q psy11036 211 ----------HAKIYEMVNFSPV 223 (239)
Q Consensus 211 ----------~i~iwd~~~~~~~ 223 (239)
-|++++++.++..
T Consensus 311 ~~~~~~~~~p~i~~~~~~~~~~~ 333 (386)
T PF14583_consen 311 AGGYKIENDPWIYLFDVEAGRFR 333 (386)
T ss_dssp ----------EEEEEETTTTEEE
T ss_pred cccceecCCcEEEEeccccCcee
Confidence 4667888776653
No 488
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=79.32 E-value=28 Score=27.14 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=0.0
Q ss_pred EEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEE
Q psy11036 11 ALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESV 90 (239)
Q Consensus 11 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~ 90 (239)
.++|+.+++.+ ..+. ....+..|+ ++++-++-+..|.+.-+|..+|+.......++....+
T Consensus 188 ~vidv~s~evl--~~GL---------------smPhSPRWh--dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL 248 (335)
T TIGR03032 188 CVIDIPSGEVV--ASGL---------------SMPHSPRWY--QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGL 248 (335)
T ss_pred EEEEeCCCCEE--EcCc---------------cCCcCCcEe--CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccc
Q ss_pred EEecCCcEEEEe---------------------CCCcEEEEEccCCCeEEEEEeccCC--ceEEEEEcCC
Q psy11036 91 LCLPSGGIFVTG---------------------GGLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASG 137 (239)
Q Consensus 91 ~~~~~~~~l~~~---------------------~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~i~~~~~ 137 (239)
.|. |.+++++ ...-|.+.|++ ++..++.++-... .+.+++.-|.
T Consensus 249 ~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl~-tG~vv~~l~feg~v~EifdV~vLPg 315 (335)
T TIGR03032 249 AFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDLN-SGDVVHWLRFEGVIEEIYDVAVLPG 315 (335)
T ss_pred cee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEECC-CCCEEEEEEeCCceeEEEEEEEecC
No 489
>KOG4460|consensus
Probab=78.69 E-value=38 Score=28.43 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=46.2
Q ss_pred CCEEEEEEecCCcEEEEeCCCcEEEEEccC---------CCeEEEE---Ee--------ccCCceEEEEEcCCC---CEE
Q psy11036 85 SPVESVLCLPSGGIFVTGGGLDVCIWDMLG---------GGKLLHK---FT--------CHHKTVTSLCLASGG---KRL 141 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~---------~~~~~~~---~~--------~~~~~i~~i~~~~~~---~~l 141 (239)
-.|..+..++.|..++.++-..|.+..+.. .++.... +. ...-.+...+|+|+. .+|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 346778889999998888843344443310 1221111 10 111246778999976 678
Q ss_pred EEEecCCeEEEEEcc
Q psy11036 142 ISASLDHHAKIYEMT 156 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~ 156 (239)
..-+.|+.|++||+.
T Consensus 184 ~iL~sdnviRiy~lS 198 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLS 198 (741)
T ss_pred EEEecCcEEEEEecC
Confidence 888899999999986
No 490
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=78.53 E-value=5.2 Score=18.32 Aligned_cols=26 Identities=8% Similarity=0.127 Sum_probs=20.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYD 71 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~ 71 (239)
+.|.+++..+ .+++.+...+.+|+|.
T Consensus 2 E~i~aia~g~---~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD---SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC---CEEEEEeCCCeEEecC
Confidence 4678888754 6888888889999874
No 491
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=78.16 E-value=6.8 Score=19.51 Aligned_cols=21 Identities=19% Similarity=0.253 Sum_probs=15.6
Q ss_pred CCCEEEEeeCCCeEEEEeCCC
Q psy11036 54 SSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~ 74 (239)
.+..+..++.||.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 356788888999999999764
No 492
>KOG2280|consensus
Probab=77.69 E-value=35 Score=29.87 Aligned_cols=72 Identities=6% Similarity=0.134 Sum_probs=46.7
Q ss_pred CCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE--E--eccCCceEEEEEcCCC
Q psy11036 64 DKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK--F--TCHHKTVTSLCLASGG 138 (239)
Q Consensus 64 dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~--~--~~~~~~i~~i~~~~~~ 138 (239)
-..|+|++.. |+....+ -..+++..+.|+.+..++++.-+|.+++|++- ++.+.. + ......|..+.+..+|
T Consensus 63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~--ge~ie~~svg~e~~~~~I~ec~~f~~G 139 (829)
T KOG2280|consen 63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLL--GEFIESNSVGFESQMSDIVECRFFHNG 139 (829)
T ss_pred ceeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecc--hhhhcccccccccccCceeEEEEecCc
Confidence 3568888875 5555444 23348889999999888888889999999985 333332 2 2223345555554454
No 493
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=77.55 E-value=41 Score=28.08 Aligned_cols=109 Identities=20% Similarity=0.212 Sum_probs=50.2
Q ss_pred CcEEEEeC----CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEE
Q psy11036 96 GGIFVTGG----GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171 (239)
Q Consensus 96 ~~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~ 171 (239)
+-+++... .....++|. .+.....+.........+...++|.+++... ..+..+|+.++.+..+
T Consensus 115 gl~~~~~~~~~~~~~~~~iD~--~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~G~v~~~~-------- 182 (477)
T PF05935_consen 115 GLYFVNGNDWDSSSYTYLIDN--NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLLGKVIWEY-------- 182 (477)
T ss_dssp -EEEEEETT--BEEEEEEEET--TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT--EEEEE--------
T ss_pred cEEEEeCCCCCCCceEEEECC--CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCCCCEEEee--------
Confidence 34555551 355667776 4666555543333222266778888776554 7788888774432222
Q ss_pred EEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-------------CceEEEEEccCCeeeEEec
Q psy11036 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-------------DHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 172 ~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------------d~~i~iwd~~~~~~~~~~~ 227 (239)
++.... ...| ..+..-|+|++|+.+.. .-.|...| .+|+.+..+.
T Consensus 183 -~l~~~~-----~~~H----HD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd 240 (477)
T PF05935_consen 183 -DLPGGY-----YDFH----HDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWD 240 (477)
T ss_dssp -E--TTE-----E-B-----S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEE
T ss_pred -ecCCcc-----cccc----cccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEe
Confidence 221110 0112 24556788888877661 11355666 7777776654
No 494
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=77.13 E-value=54 Score=29.28 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=17.2
Q ss_pred CceEEEEEccCCeeeEEec
Q psy11036 209 DHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~ 227 (239)
+|.|+-+|.++|+.+..+.
T Consensus 335 ~G~I~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 335 SGVIRAFDVNTGALVWAWD 353 (764)
T ss_pred CcEEEEEECCCCcEeeEEe
Confidence 6899999999999998876
No 495
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=76.91 E-value=20 Score=24.09 Aligned_cols=51 Identities=16% Similarity=0.117 Sum_probs=26.6
Q ss_pred CcEEEEEEccCCCeEE-EEcCCceEEEEEccCCe----eeEEecCCCCeeeeEecC
Q psy11036 189 KTVTSLCLASGGKRLI-SASLDHHAKIYEMVNFS----PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~-s~s~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp 239 (239)
..+.---|.+|.+.|. +|-.|++|+.|++...+ .+..+....+..+++|-|
T Consensus 11 ~g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lP 66 (136)
T PF08954_consen 11 SGVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLP 66 (136)
T ss_dssp SS-EEEEE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--
T ss_pred CceeEeeEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEccccccCCCeEeeEecC
Confidence 4455566778777664 55579999999997763 244455667777877754
No 496
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=75.99 E-value=34 Score=26.46 Aligned_cols=108 Identities=7% Similarity=0.073 Sum_probs=0.0
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-CceeeecCCCCEEEEEEecCCcEEEEeCCCc--EEEEEccCCCeE--
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKL-- 118 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--i~~~d~~~~~~~-- 118 (239)
.+++..-...++++|+.|+++| +.+.++... .....+-...+|+++...+..+.+++-+++. ++.+++. .-..
T Consensus 2 ~~~~~~~~~~~~~~lL~GTe~G-ly~~~~~~~~~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~-~L~~~~ 79 (302)
T smart00036 2 TAKWNHPITCDGKWLLVGTEEG-LYVLNISDQPGTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS-ALVEKK 79 (302)
T ss_pred CceEccccccCCcEEEEEeCCc-eEEEEcccCCCCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH-Hhhhhh
Q ss_pred --------------EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 119 --------------LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 119 --------------~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
...+..-.+....-.-......++++....+|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~ 128 (302)
T smart00036 80 EALGSARLVIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLL 128 (302)
T ss_pred hccCCccccccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEE
No 497
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=74.95 E-value=47 Score=27.51 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=37.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc--eeeec------CCCCEEEEEEecCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP--VMSVN------HGSPVESVLCLPSG 96 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~~------~~~~v~~~~~~~~~ 96 (239)
.....++|.| ++++|++--..|.|++++..++.. +..+. .......|+++|+-
T Consensus 30 ~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 30 NKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 5677999999 787777655469999998655432 11111 34678899999874
No 498
>PRK10115 protease 2; Provisional
Probab=73.53 E-value=64 Score=28.43 Aligned_cols=67 Identities=12% Similarity=-0.088 Sum_probs=37.8
Q ss_pred EEEEEecCCCC-EEEEeeCC-----CeEEEEeCCCCC--ceeeec-CCCCEE-EEEEecCCcEEEEeC----CCcEEEEE
Q psy11036 46 RAGTVSPVSSD-IVISGSYD-----KTVNVYDTRSPD--PVMSVN-HGSPVE-SVLCLPSGGIFVTGG----GLDVCIWD 111 (239)
Q Consensus 46 ~~~~~~~~~~~-~l~s~~~d-----g~v~vw~~~~~~--~~~~~~-~~~~v~-~~~~~~~~~~l~~~~----~~~i~~~d 111 (239)
..++|.+ +++ ++.+...+ ..|..+++.++. -...+. ...... .+..+.++++++... ++.+.+++
T Consensus 175 ~~~~w~~-D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~ 253 (686)
T PRK10115 175 PSFVWAN-DSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLD 253 (686)
T ss_pred eEEEEee-CCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEE
Confidence 4699999 455 44443322 368888888773 233332 223333 233344777666444 36788888
Q ss_pred cc
Q psy11036 112 ML 113 (239)
Q Consensus 112 ~~ 113 (239)
..
T Consensus 254 ~~ 255 (686)
T PRK10115 254 AE 255 (686)
T ss_pred Cc
Confidence 53
No 499
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=71.27 E-value=17 Score=32.51 Aligned_cols=155 Identities=10% Similarity=0.114 Sum_probs=0.0
Q ss_pred eCCCeEEEEeCCCCCceeee-cCCCCEEEEEE---------ecCCcEEEEeCCCcEEEEEccCCCeEEEEEe--------
Q psy11036 62 SYDKTVNVYDTRSPDPVMSV-NHGSPVESVLC---------LPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT-------- 123 (239)
Q Consensus 62 ~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~---------~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~-------- 123 (239)
+.|..+.+||..++..-..+ .....|..+.. +.-..+++++....+.++-+. ..+....+.
T Consensus 99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs-~d~~T~Els~fnTgl~v 177 (1263)
T COG5308 99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVS-KDTKTGELSLFNTGLVV 177 (1263)
T ss_pred EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEE-eccccceeEEEecceEE
Q ss_pred -ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc----cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 124 -CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT----LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 124 -~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
...-.|.++.-+.+|+.+.+|-.| +.+|.+. .......+..-.+.--.+.+--.....+.-|...|..++...
T Consensus 178 svqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDq 255 (1263)
T COG5308 178 SVQGINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQ 255 (1263)
T ss_pred eccCceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecc
Q ss_pred CCCeEEEEcCCceEEEEEccC
Q psy11036 199 GGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~ 219 (239)
....|.+-+....|+-|.+..
T Consensus 256 sRg~ly~Lr~kS~Vray~itk 276 (1263)
T COG5308 256 SRGLLYVLRKKSAVRAYSITK 276 (1263)
T ss_pred cccceeeecccceeeeEeeec
No 500
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=71.00 E-value=21 Score=21.75 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=0.0
Q ss_pred CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC
Q psy11036 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG 115 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~ 115 (239)
+.|..||..+ .......-...+.|.++|+++.+.+++ .+.|.+|.....
T Consensus 36 ~~Vvyyd~~~--~~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~~ 86 (86)
T PF01731_consen 36 GNVVYYDGKE--VKVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRHKD 86 (86)
T ss_pred ceEEEEeCCE--eEEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEecCC
Done!