Query psy11036
Match_columns 239
No_of_seqs 441 out of 1128
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 16:28:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.3E-42 4.4E-47 264.5 33.9 218 6-239 33-280 (304)
2 1vyh_C Platelet-activating fac 100.0 4.9E-41 1.7E-45 265.8 30.0 218 5-239 127-390 (410)
3 3ow8_A WD repeat-containing pr 100.0 8.8E-40 3E-44 250.6 27.8 200 4-239 98-300 (321)
4 4gqb_B Methylosome protein 50; 100.0 1.2E-39 4E-44 252.0 26.4 199 5-239 100-309 (344)
5 4g56_B MGC81050 protein; prote 100.0 5.6E-39 1.9E-43 249.6 24.9 215 7-239 69-321 (357)
6 1got_B GT-beta; complex (GTP-b 100.0 2.8E-37 9.5E-42 238.6 33.4 218 5-239 74-322 (340)
7 3frx_A Guanine nucleotide-bind 100.0 5.9E-38 2E-42 240.3 28.5 199 4-239 36-247 (319)
8 3ow8_A WD repeat-containing pr 100.0 6.5E-38 2.2E-42 240.3 26.8 200 4-239 54-258 (321)
9 4ery_A WD repeat-containing pr 100.0 6.3E-37 2.2E-41 233.7 31.6 218 5-239 42-289 (312)
10 2ynn_A Coatomer subunit beta'; 100.0 9.5E-37 3.2E-41 232.1 30.7 205 19-239 4-238 (304)
11 1erj_A Transcriptional repress 100.0 1.5E-36 5E-41 238.9 28.6 210 5-239 142-362 (393)
12 1vyh_C Platelet-activating fac 100.0 1.9E-36 6.7E-41 239.4 29.3 197 40-239 106-348 (410)
13 2pbi_B Guanine nucleotide-bind 100.0 1E-35 3.5E-40 231.0 31.5 218 5-239 83-336 (354)
14 1nr0_A Actin interacting prote 100.0 3.1E-36 1.1E-40 249.4 30.2 214 8-239 129-377 (611)
15 1nr0_A Actin interacting prote 100.0 4.3E-36 1.5E-40 248.5 30.7 218 5-239 167-546 (611)
16 2xzm_R RACK1; ribosome, transl 100.0 4.2E-36 1.4E-40 232.2 28.6 197 5-239 46-265 (343)
17 2hes_X YDR267CP; beta-propelle 100.0 6.6E-36 2.3E-40 230.0 27.6 204 3-239 29-260 (330)
18 1got_B GT-beta; complex (GTP-b 100.0 9E-36 3.1E-40 230.1 27.9 194 5-216 116-340 (340)
19 4gqb_B Methylosome protein 50; 100.0 4E-36 1.4E-40 232.2 24.5 181 5-221 146-333 (344)
20 3frx_A Guanine nucleotide-bind 100.0 2.3E-35 7.7E-40 226.0 28.0 198 5-220 84-318 (319)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-35 4.5E-40 229.7 26.3 202 5-239 35-262 (345)
22 1gxr_A ESG1, transducin-like e 100.0 4.1E-34 1.4E-38 219.6 32.6 216 6-239 70-316 (337)
23 2pm7_B Protein transport prote 100.0 2.5E-35 8.5E-40 223.6 25.1 204 5-239 28-264 (297)
24 2pbi_B Guanine nucleotide-bind 100.0 8E-35 2.7E-39 226.0 28.5 195 5-216 125-354 (354)
25 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-34 3.9E-39 228.7 29.8 221 4-239 53-323 (402)
26 2ymu_A WD-40 repeat protein; u 100.0 1.3E-34 4.6E-39 237.8 31.0 213 5-239 322-559 (577)
27 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-34 5.4E-39 246.0 32.4 218 6-239 33-280 (814)
28 4aow_A Guanine nucleotide-bind 100.0 5.8E-34 2E-38 219.3 31.1 214 10-239 18-266 (340)
29 3iz6_a 40S ribosomal protein R 100.0 6.3E-36 2.2E-40 234.3 19.9 216 9-239 47-308 (380)
30 3k26_A Polycomb protein EED; W 100.0 1.4E-34 4.6E-39 224.7 27.0 224 6-239 42-345 (366)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-34 4.3E-39 224.2 26.6 207 5-227 80-343 (345)
32 3vl1_A 26S proteasome regulato 100.0 1.2E-34 4.1E-39 229.4 26.9 217 5-238 75-344 (420)
33 3dm0_A Maltose-binding peripla 100.0 9.5E-35 3.3E-39 243.7 27.1 200 4-239 401-612 (694)
34 1erj_A Transcriptional repress 100.0 6.1E-34 2.1E-38 224.0 29.6 217 6-239 83-320 (393)
35 3dwl_C Actin-related protein 2 100.0 3E-36 1E-40 235.5 16.2 215 5-239 30-261 (377)
36 2xzm_R RACK1; ribosome, transl 100.0 1.7E-34 5.8E-39 223.2 24.9 200 5-221 95-342 (343)
37 3vl1_A 26S proteasome regulato 100.0 1.5E-34 5.3E-39 228.8 24.8 218 5-239 116-395 (420)
38 4ggc_A P55CDC, cell division c 100.0 1E-33 3.5E-38 216.0 28.2 200 5-222 42-318 (318)
39 4ery_A WD repeat-containing pr 100.0 2.1E-33 7.1E-38 214.3 29.5 186 18-239 13-202 (312)
40 4aez_A CDC20, WD repeat-contai 100.0 5.1E-33 1.7E-37 219.2 32.6 216 5-239 110-359 (401)
41 2hes_X YDR267CP; beta-propelle 100.0 6.5E-34 2.2E-38 218.9 26.8 206 5-239 77-305 (330)
42 4g56_B MGC81050 protein; prote 100.0 1.3E-34 4.5E-39 225.0 22.3 181 5-221 158-345 (357)
43 3iz6_a 40S ribosomal protein R 100.0 2.7E-34 9.1E-39 225.1 24.1 182 5-221 177-377 (380)
44 4h5i_A Guanine nucleotide-exch 100.0 8.2E-34 2.8E-38 221.1 26.5 177 6-219 155-343 (365)
45 1sq9_A Antiviral protein SKI8; 100.0 6.8E-34 2.3E-38 223.4 26.2 220 3-239 31-364 (397)
46 3mmy_A MRNA export factor; mRN 100.0 1.2E-33 4.1E-38 219.4 27.1 215 9-239 20-325 (368)
47 2ymu_A WD-40 repeat protein; u 100.0 5.9E-33 2E-37 228.0 32.4 213 5-239 281-518 (577)
48 3bg1_A Protein SEC13 homolog; 100.0 6.5E-35 2.2E-39 223.2 18.2 204 5-239 32-272 (316)
49 1k8k_C P40, ARP2/3 complex 41 100.0 2E-33 6.9E-38 218.8 26.7 217 5-239 27-254 (372)
50 3zwl_B Eukaryotic translation 100.0 3.6E-33 1.2E-37 216.8 28.0 201 5-239 51-269 (369)
51 4gga_A P55CDC, cell division c 100.0 1.7E-32 5.9E-37 217.4 32.0 216 5-239 122-374 (420)
52 2pm9_A Protein WEB1, protein t 100.0 2.3E-34 7.9E-39 227.3 19.8 219 5-239 42-315 (416)
53 4aow_A Guanine nucleotide-bind 100.0 8.7E-33 3E-37 212.7 27.8 201 4-221 57-339 (340)
54 2j04_B YDR362CP, TAU91; beta p 100.0 5.1E-34 1.7E-38 231.0 21.7 202 3-239 178-407 (524)
55 3odt_A Protein DOA1; ubiquitin 100.0 3.8E-32 1.3E-36 206.7 30.7 214 4-239 35-276 (313)
56 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-32 6.2E-37 242.6 33.2 219 5-239 634-892 (1249)
57 4h5i_A Guanine nucleotide-exch 100.0 9.2E-33 3.1E-37 215.2 27.0 211 5-239 101-322 (365)
58 2pm7_B Protein transport prote 100.0 1.4E-32 4.9E-37 208.4 26.0 178 43-239 10-214 (297)
59 3v7d_B Cell division control p 100.0 1.7E-32 5.8E-37 219.9 27.8 198 4-239 138-362 (464)
60 3dm0_A Maltose-binding peripla 100.0 1E-32 3.4E-37 231.5 27.6 198 5-219 449-693 (694)
61 1r5m_A SIR4-interacting protei 100.0 6.3E-33 2.2E-37 219.2 24.7 217 5-239 127-404 (425)
62 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-31 4.2E-36 214.0 31.0 211 4-239 175-417 (445)
63 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-32 5.7E-37 211.1 24.7 208 5-227 30-345 (351)
64 3i2n_A WD repeat-containing pr 100.0 1.1E-32 3.9E-37 213.3 23.7 219 6-239 42-331 (357)
65 3dw8_B Serine/threonine-protei 100.0 1.8E-33 6.2E-38 224.3 19.2 217 5-224 47-378 (447)
66 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-31 4.5E-36 206.1 29.0 196 43-239 12-316 (351)
67 3jrp_A Fusion protein of prote 100.0 1.2E-32 4.1E-37 214.7 23.3 204 5-239 30-266 (379)
68 3ei3_B DNA damage-binding prot 100.0 7.8E-32 2.7E-36 211.1 27.6 189 5-227 93-290 (383)
69 4aez_A CDC20, WD repeat-contai 100.0 9E-32 3.1E-36 212.1 27.5 214 5-236 153-399 (401)
70 1r5m_A SIR4-interacting protei 100.0 7.6E-32 2.6E-36 213.0 26.7 225 5-239 65-340 (425)
71 4a11_B DNA excision repair pro 100.0 8.2E-32 2.8E-36 211.9 26.3 207 5-227 119-373 (408)
72 3v7d_B Cell division control p 100.0 2.8E-31 9.4E-36 212.9 29.5 216 4-239 179-443 (464)
73 4e54_B DNA damage-binding prot 100.0 4E-33 1.4E-37 222.0 18.4 189 5-227 139-335 (435)
74 3k26_A Polycomb protein EED; W 100.0 2E-32 7E-37 212.4 21.9 198 5-219 92-366 (366)
75 3gre_A Serine/threonine-protei 100.0 5.3E-32 1.8E-36 215.5 24.8 205 4-227 82-367 (437)
76 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-31 3.9E-36 213.6 26.0 210 5-238 150-394 (435)
77 1gxr_A ESG1, transducin-like e 100.0 1.4E-31 4.6E-36 205.6 25.3 174 43-239 52-234 (337)
78 3ei3_B DNA damage-binding prot 100.0 2.2E-31 7.5E-36 208.5 26.4 190 12-239 57-260 (383)
79 2xyi_A Probable histone-bindin 100.0 7.8E-32 2.7E-36 214.3 23.9 202 5-239 148-388 (430)
80 3zwl_B Eukaryotic translation 100.0 2.3E-31 7.9E-36 206.6 26.0 204 5-225 93-352 (369)
81 2pm9_A Protein WEB1, protein t 100.0 3.5E-32 1.2E-36 214.8 21.5 202 5-222 86-340 (416)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-30 4.4E-35 208.1 30.0 211 4-239 135-372 (445)
83 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-33 1.3E-37 225.9 15.0 197 5-239 232-453 (524)
84 1sq9_A Antiviral protein SKI8; 100.0 3.4E-31 1.1E-35 208.1 23.7 199 5-221 88-397 (397)
85 3i2n_A WD repeat-containing pr 100.0 5.1E-31 1.7E-35 204.0 24.2 201 5-222 87-356 (357)
86 4gga_A P55CDC, cell division c 100.0 8.2E-31 2.8E-35 207.8 25.9 205 5-227 166-403 (420)
87 1yfq_A Cell cycle arrest prote 100.0 2.7E-31 9.1E-36 204.6 22.4 212 5-236 30-301 (342)
88 4a11_B DNA excision repair pro 100.0 7.6E-31 2.6E-35 206.4 25.2 209 5-221 63-278 (408)
89 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.3E-31 1.1E-35 211.8 23.4 164 41-227 101-279 (450)
90 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-30 5.8E-35 207.7 27.2 219 4-239 121-364 (450)
91 4e54_B DNA damage-binding prot 100.0 9.4E-32 3.2E-36 214.2 19.7 175 43-239 120-306 (435)
92 3jro_A Fusion protein of prote 100.0 3.1E-31 1.1E-35 224.1 23.8 203 5-239 28-264 (753)
93 1pgu_A Actin interacting prote 100.0 4E-30 1.4E-34 212.3 30.0 216 5-239 180-541 (615)
94 3lrv_A PRE-mRNA-splicing facto 100.0 4.8E-32 1.7E-36 209.4 17.4 194 4-239 54-270 (343)
95 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-30 1.1E-34 219.6 29.9 205 19-239 4-238 (814)
96 2oaj_A Protein SNI1; WD40 repe 100.0 3.4E-31 1.2E-35 227.2 23.8 212 5-238 36-280 (902)
97 3jrp_A Fusion protein of prote 100.0 1E-30 3.5E-35 203.7 24.5 188 18-239 1-216 (379)
98 4gq1_A NUP37; propeller, trans 100.0 9.3E-32 3.2E-36 211.5 18.2 218 4-239 107-369 (393)
99 3gre_A Serine/threonine-protei 100.0 7.8E-31 2.7E-35 208.7 23.3 193 12-239 47-267 (437)
100 3bg1_A Protein SEC13 homolog; 100.0 7.1E-32 2.4E-36 206.3 16.3 179 43-239 14-222 (316)
101 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-29 4.4E-34 192.7 28.4 199 18-239 8-235 (313)
102 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-30 5.4E-35 230.3 26.6 218 5-239 720-1054(1249)
103 2w18_A PALB2, fancn, partner a 100.0 1.9E-30 6.6E-35 195.8 23.0 176 5-217 154-355 (356)
104 1pgu_A Actin interacting prote 100.0 2.1E-30 7.3E-35 214.0 25.6 195 7-238 38-262 (615)
105 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-30 5.8E-35 202.2 23.1 179 5-219 71-274 (372)
106 1l0q_A Surface layer protein; 100.0 5.1E-29 1.7E-33 195.5 31.5 217 3-239 7-253 (391)
107 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-30 4.1E-35 207.8 22.2 212 4-239 189-434 (435)
108 3dwl_C Actin-related protein 2 100.0 1.5E-31 5.2E-36 208.9 14.7 178 43-239 12-215 (377)
109 3lrv_A PRE-mRNA-splicing facto 100.0 2.2E-30 7.4E-35 200.2 20.0 184 4-221 91-294 (343)
110 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-30 4.7E-35 208.2 19.1 171 43-239 86-277 (588)
111 2xyi_A Probable histone-bindin 100.0 1.8E-29 6E-34 200.8 23.7 195 4-219 200-410 (430)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 4.3E-30 1.5E-34 202.5 19.9 201 5-222 101-345 (402)
113 3vu4_A KMHSV2; beta-propeller 100.0 2E-29 7E-34 195.6 23.2 206 12-239 3-250 (355)
114 1yfq_A Cell cycle arrest prote 100.0 6.9E-29 2.4E-33 191.1 25.5 193 43-239 12-261 (342)
115 3bws_A Protein LP49; two-domai 100.0 3.8E-28 1.3E-32 192.9 29.5 216 5-239 141-410 (433)
116 3mmy_A MRNA export factor; mRN 100.0 1.4E-29 4.7E-34 196.5 19.0 197 5-218 61-345 (368)
117 3vu4_A KMHSV2; beta-propeller 100.0 2.8E-28 9.7E-33 189.2 25.4 177 7-221 39-273 (355)
118 3jro_A Fusion protein of prote 100.0 8.2E-29 2.8E-33 209.4 22.5 177 43-239 10-214 (753)
119 3dw8_B Serine/threonine-protei 100.0 1.2E-28 4E-33 196.4 21.1 181 43-239 29-295 (447)
120 1l0q_A Surface layer protein; 100.0 1.1E-26 3.6E-31 182.2 31.7 203 5-227 51-283 (391)
121 2oaj_A Protein SNI1; WD40 repe 100.0 3.1E-28 1E-32 209.0 23.8 183 43-239 18-221 (902)
122 2j04_A TAU60, YPL007P, hypothe 100.0 4.4E-28 1.5E-32 193.8 21.7 180 1-218 93-296 (588)
123 2w18_A PALB2, fancn, partner a 100.0 3E-27 1E-31 178.5 24.1 209 7-239 62-336 (356)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.8E-26 2E-30 179.7 29.0 210 8-239 159-407 (415)
125 4ggc_A P55CDC, cell division c 100.0 1E-25 3.6E-30 171.6 27.7 189 45-239 28-294 (318)
126 4gq1_A NUP37; propeller, trans 100.0 1.3E-27 4.3E-32 188.0 17.0 178 4-217 162-387 (393)
127 3bws_A Protein LP49; two-domai 100.0 2.2E-25 7.6E-30 177.0 28.1 212 9-239 102-354 (433)
128 1pby_B Quinohemoprotein amine 99.9 2.7E-24 9.1E-29 165.0 26.7 216 3-239 6-289 (337)
129 2ojh_A Uncharacterized protein 99.9 9.5E-25 3.2E-29 164.2 21.5 219 3-239 17-281 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-24 5.6E-29 172.1 18.6 174 43-239 37-250 (434)
131 1nir_A Nitrite reductase; hemo 99.9 7.7E-23 2.6E-27 166.7 28.0 217 4-239 155-430 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.4E-24 2.9E-28 167.3 20.2 194 9-239 94-320 (415)
133 3u4y_A Uncharacterized protein 99.9 1.2E-22 4.2E-27 155.7 25.3 202 3-239 15-230 (331)
134 1nir_A Nitrite reductase; hemo 99.9 3.8E-22 1.3E-26 162.7 26.1 217 6-239 198-488 (543)
135 3vgz_A Uncharacterized protein 99.9 1.2E-21 4.3E-26 151.2 27.9 206 5-239 108-323 (353)
136 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-22 4.4E-27 171.3 22.9 226 9-239 65-389 (741)
137 1xfd_A DIP, dipeptidyl aminope 99.9 7E-23 2.4E-27 172.5 18.5 218 5-239 34-315 (723)
138 3vgz_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 148.6 26.3 195 7-239 68-281 (353)
139 1ri6_A Putative isomerase YBHE 99.9 1.4E-21 4.6E-26 150.2 23.1 220 3-239 10-286 (343)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-22 6.3E-27 160.3 18.2 162 43-220 93-279 (434)
141 1jmx_B Amine dehydrogenase; ox 99.9 2.7E-21 9.4E-26 148.9 23.8 216 4-239 17-304 (349)
142 3u4y_A Uncharacterized protein 99.9 1.6E-20 5.5E-25 143.9 26.6 200 7-222 61-307 (331)
143 1ri6_A Putative isomerase YBHE 99.9 1E-20 3.5E-25 145.3 24.1 216 7-239 59-332 (343)
144 1pby_B Quinohemoprotein amine 99.9 9.2E-21 3.1E-25 145.2 22.4 208 6-228 54-319 (337)
145 1jmx_B Amine dehydrogenase; ox 99.9 5.2E-20 1.8E-24 141.8 21.4 191 6-231 63-337 (349)
146 1k32_A Tricorn protease; prote 99.9 8.5E-21 2.9E-25 165.8 18.8 204 7-239 264-481 (1045)
147 3hfq_A Uncharacterized protein 99.9 4.9E-19 1.7E-23 136.6 26.7 200 7-239 62-295 (347)
148 1z68_A Fibroblast activation p 99.9 3.3E-22 1.1E-26 168.4 9.2 221 6-239 34-321 (719)
149 2z3z_A Dipeptidyl aminopeptida 99.9 5.6E-20 1.9E-24 154.5 22.0 215 1-239 128-410 (706)
150 2ecf_A Dipeptidyl peptidase IV 99.9 7.3E-20 2.5E-24 154.6 21.3 220 1-239 116-434 (741)
151 2z3z_A Dipeptidyl aminopeptida 99.9 1.6E-20 5.3E-25 157.9 17.1 228 6-239 43-365 (706)
152 3o4h_A Acylamino-acid-releasin 99.8 3.2E-20 1.1E-24 152.8 16.6 187 7-236 43-244 (582)
153 3scy_A Hypothetical bacterial 99.8 1.3E-18 4.6E-23 134.9 24.3 215 5-238 117-360 (361)
154 2ojh_A Uncharacterized protein 99.8 1.2E-19 4.2E-24 136.2 16.4 179 60-239 17-226 (297)
155 3hfq_A Uncharacterized protein 99.8 1.8E-17 6E-22 127.9 26.6 195 6-223 106-323 (347)
156 2oiz_A Aromatic amine dehydrog 99.8 2.8E-17 9.5E-22 127.7 27.3 212 6-239 29-357 (361)
157 4a5s_A Dipeptidyl peptidase 4 99.8 2E-18 6.8E-23 145.9 21.6 204 7-221 35-296 (740)
158 1k32_A Tricorn protease; prote 99.8 1.9E-18 6.6E-23 151.0 21.3 210 9-239 184-430 (1045)
159 3scy_A Hypothetical bacterial 99.8 8.1E-17 2.8E-21 124.9 27.3 201 7-239 74-315 (361)
160 3o4h_A Acylamino-acid-releasin 99.8 1.1E-18 3.7E-23 143.7 17.1 166 44-238 111-291 (582)
161 1xfd_A DIP, dipeptidyl aminope 99.8 1.6E-19 5.5E-24 152.0 11.5 172 43-239 17-264 (723)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.6E-16 8.9E-21 122.3 26.6 198 6-237 117-363 (365)
163 3pe7_A Oligogalacturonate lyas 99.8 3.8E-17 1.3E-21 127.7 20.7 214 9-239 61-360 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.2E-17 2.5E-21 125.5 21.3 202 9-239 61-316 (365)
165 1q7f_A NHL, brain tumor CG1071 99.8 2.3E-15 7.9E-20 113.0 26.1 201 5-239 48-260 (286)
166 1q7f_A NHL, brain tumor CG1071 99.7 4.7E-15 1.6E-19 111.3 25.1 176 7-222 99-283 (286)
167 1z68_A Fibroblast activation p 99.7 1.1E-17 3.6E-22 141.0 11.3 177 7-221 89-348 (719)
168 3fvz_A Peptidyl-glycine alpha- 99.7 5.9E-15 2E-19 113.1 24.7 197 7-239 68-301 (329)
169 3azo_A Aminopeptidase; POP fam 99.7 4.2E-16 1.4E-20 130.1 19.2 170 43-235 130-341 (662)
170 3fvz_A Peptidyl-glycine alpha- 99.7 8.1E-15 2.8E-19 112.3 24.7 185 43-239 24-250 (329)
171 2dg1_A DRP35, lactonase; beta 99.7 4E-14 1.4E-18 108.4 28.5 202 6-239 64-289 (333)
172 3azo_A Aminopeptidase; POP fam 99.7 1.3E-15 4.3E-20 127.2 20.3 188 5-227 44-282 (662)
173 3no2_A Uncharacterized protein 99.7 1.2E-14 4E-19 108.6 22.7 183 4-227 11-203 (276)
174 1qks_A Cytochrome CD1 nitrite 99.7 6.8E-14 2.3E-18 114.3 28.6 189 4-228 173-382 (567)
175 2gop_A Trilobed protease; beta 99.7 2.3E-15 7.8E-20 115.9 19.1 182 9-239 86-311 (347)
176 3dsm_A Uncharacterized protein 99.7 8.2E-15 2.8E-19 112.3 21.9 212 6-237 62-319 (328)
177 4a5s_A Dipeptidyl peptidase 4 99.7 1.6E-16 5.4E-21 134.3 12.8 180 43-239 17-269 (740)
178 3e5z_A Putative gluconolactona 99.7 2.9E-14 1E-18 107.5 23.3 195 6-238 48-264 (296)
179 3pe7_A Oligogalacturonate lyas 99.7 5.5E-15 1.9E-19 115.5 19.4 203 13-239 15-247 (388)
180 2xdw_A Prolyl endopeptidase; a 99.7 1.8E-14 6.2E-19 121.3 23.3 194 44-239 126-389 (710)
181 1xip_A Nucleoporin NUP159; bet 99.7 4.4E-15 1.5E-19 115.2 17.6 163 43-239 38-223 (388)
182 3dsm_A Uncharacterized protein 99.7 3.2E-13 1.1E-17 103.4 25.3 201 6-239 15-234 (328)
183 3c5m_A Oligogalacturonate lyas 99.6 5.8E-15 2E-19 115.4 15.3 178 7-224 101-334 (396)
184 3sjl_D Methylamine dehydrogena 99.6 2.6E-13 9E-18 104.9 23.5 212 7-239 58-383 (386)
185 3c5m_A Oligogalacturonate lyas 99.6 1.6E-14 5.3E-19 113.0 17.0 192 8-239 60-291 (396)
186 2dg1_A DRP35, lactonase; beta 99.6 6.2E-13 2.1E-17 101.8 25.2 174 6-219 25-213 (333)
187 2bkl_A Prolyl endopeptidase; m 99.6 1.1E-13 3.7E-18 116.3 21.7 194 43-239 121-372 (695)
188 2gop_A Trilobed protease; beta 99.6 1.6E-13 5.6E-18 105.5 20.6 182 6-238 41-272 (347)
189 3g4e_A Regucalcin; six bladed 99.6 2.4E-12 8.2E-17 97.2 26.1 197 6-238 33-249 (297)
190 1rwi_B Serine/threonine-protei 99.6 3.4E-13 1.2E-17 100.1 21.1 174 43-239 67-243 (270)
191 2mad_H Methylamine dehydrogena 99.6 4.7E-12 1.6E-16 98.5 28.3 208 9-239 48-327 (373)
192 3c75_H MADH, methylamine dehyd 99.6 2.3E-12 8E-17 101.2 24.3 200 8-227 99-410 (426)
193 1rwi_B Serine/threonine-protei 99.6 2.6E-13 8.8E-18 100.8 18.0 158 43-222 108-267 (270)
194 2xdw_A Prolyl endopeptidase; a 99.6 8.9E-13 3.1E-17 111.0 23.1 195 9-221 152-416 (710)
195 3no2_A Uncharacterized protein 99.6 3.8E-13 1.3E-17 100.5 18.5 164 55-237 5-172 (276)
196 3e5z_A Putative gluconolactona 99.6 1.9E-12 6.6E-17 97.5 22.5 171 43-239 28-227 (296)
197 2oiz_A Aromatic amine dehydrog 99.6 2E-12 6.8E-17 100.3 22.0 174 63-239 29-314 (361)
198 1yr2_A Prolyl oligopeptidase; 99.5 5.6E-12 1.9E-16 106.7 22.7 192 44-239 164-416 (741)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.6E-11 2.3E-15 89.6 25.9 200 4-239 42-277 (314)
200 1xip_A Nucleoporin NUP159; bet 99.5 2E-12 6.7E-17 100.4 17.5 131 43-206 89-231 (388)
201 1mda_H Methylamine dehydrogena 99.5 3.5E-12 1.2E-16 98.6 18.2 207 9-239 47-366 (368)
202 1qks_A Cytochrome CD1 nitrite 99.5 1.8E-10 6.2E-15 94.2 28.5 186 6-229 216-438 (567)
203 3hrp_A Uncharacterized protein 99.5 4.2E-11 1.4E-15 94.4 23.7 193 5-224 149-359 (409)
204 2z2n_A Virginiamycin B lyase; 99.5 1.7E-10 6E-15 86.5 26.2 171 43-239 57-234 (299)
205 2mad_H Methylamine dehydrogena 99.5 5.2E-10 1.8E-14 87.1 28.5 206 7-229 96-361 (373)
206 2z2n_A Virginiamycin B lyase; 99.5 5.1E-10 1.7E-14 83.9 27.0 169 43-237 99-274 (299)
207 2ghs_A AGR_C_1268P; regucalcin 99.4 5.4E-10 1.8E-14 85.4 27.4 195 7-238 70-279 (326)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 7.1E-11 2.4E-15 89.4 22.0 155 43-219 117-299 (314)
209 3dr2_A Exported gluconolactona 99.4 3.3E-10 1.1E-14 85.7 22.7 193 6-239 65-286 (305)
210 2qc5_A Streptogramin B lactona 99.4 2.2E-09 7.6E-14 80.4 27.0 172 43-239 62-239 (300)
211 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.3E-14 80.9 26.4 171 43-238 104-280 (300)
212 2iwa_A Glutamine cyclotransfer 99.4 7.1E-10 2.4E-14 81.6 22.0 169 44-239 22-215 (266)
213 2ece_A 462AA long hypothetical 99.4 6.4E-10 2.2E-14 87.0 22.3 210 3-229 101-365 (462)
214 1npe_A Nidogen, entactin; glyc 99.3 1.7E-08 5.7E-13 74.8 28.8 173 43-239 79-260 (267)
215 3g4e_A Regucalcin; six bladed 99.3 4.5E-09 1.6E-13 79.1 24.9 157 43-222 13-185 (297)
216 2bkl_A Prolyl endopeptidase; m 99.3 1.9E-10 6.4E-15 96.7 18.1 178 8-222 202-400 (695)
217 2hz6_A Endoplasmic reticulum t 99.3 8.4E-13 2.9E-17 102.7 3.3 184 5-234 16-207 (369)
218 3nol_A Glutamine cyclotransfer 99.3 3.7E-09 1.3E-13 77.0 21.3 173 43-239 43-234 (262)
219 2qe8_A Uncharacterized protein 99.3 6.8E-10 2.3E-14 85.5 18.2 183 43-239 67-300 (343)
220 1yr2_A Prolyl oligopeptidase; 99.2 3.5E-09 1.2E-13 89.7 22.9 182 7-222 242-444 (741)
221 3nok_A Glutaminyl cyclase; bet 99.2 6.7E-09 2.3E-13 75.7 20.9 173 43-239 55-244 (268)
222 1kb0_A Quinohemoprotein alcoho 99.2 4.3E-09 1.5E-13 88.1 22.8 221 6-230 188-518 (677)
223 3hrp_A Uncharacterized protein 99.2 5.6E-09 1.9E-13 82.3 21.6 166 43-218 219-409 (409)
224 3iuj_A Prolyl endopeptidase; h 99.2 8.4E-10 2.9E-14 92.8 17.4 191 43-238 129-379 (693)
225 1yiq_A Quinohemoprotein alcoho 99.2 1.1E-08 3.6E-13 85.9 23.9 220 6-229 181-515 (689)
226 3mbr_X Glutamine cyclotransfer 99.2 3.9E-08 1.3E-12 71.0 23.6 174 43-239 21-213 (243)
227 3c75_H MADH, methylamine dehyd 99.2 3E-09 1E-13 83.7 17.9 183 54-239 83-379 (426)
228 2ghs_A AGR_C_1268P; regucalcin 99.2 2.4E-08 8.2E-13 76.2 22.5 164 9-206 110-289 (326)
229 2iwa_A Glutamine cyclotransfer 99.2 7.5E-09 2.6E-13 76.1 18.7 175 7-220 43-238 (266)
230 3dr2_A Exported gluconolactona 99.1 3E-08 1E-12 74.9 21.5 165 43-221 45-226 (305)
231 3nol_A Glutamine cyclotransfer 99.1 1.1E-08 3.9E-13 74.4 17.7 175 4-208 59-244 (262)
232 1npe_A Nidogen, entactin; glyc 99.1 4.3E-07 1.5E-11 67.1 26.6 159 43-222 36-201 (267)
233 2qe8_A Uncharacterized protein 99.1 9.9E-09 3.4E-13 78.9 17.2 180 7-215 92-317 (343)
234 1fwx_A Nitrous oxide reductase 99.1 3.1E-08 1.1E-12 80.2 19.7 200 3-227 107-379 (595)
235 3nok_A Glutaminyl cyclase; bet 99.1 2.9E-08 9.8E-13 72.4 17.7 174 3-207 70-253 (268)
236 2hz6_A Endoplasmic reticulum t 99.1 1.1E-11 3.9E-16 96.3 -0.5 147 54-227 8-157 (369)
237 1fwx_A Nitrous oxide reductase 99.1 6.7E-09 2.3E-13 84.0 15.2 187 7-221 174-433 (595)
238 3sjl_D Methylamine dehydrogena 99.0 1.2E-08 4.2E-13 79.0 15.6 107 47-156 37-168 (386)
239 1mda_H Methylamine dehydrogena 99.0 9.3E-09 3.2E-13 79.5 14.7 98 57-156 34-157 (368)
240 3mbr_X Glutamine cyclotransfer 99.0 1.6E-07 5.4E-12 67.8 19.6 173 8-208 43-223 (243)
241 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1.5E-07 5.1E-12 73.1 20.9 200 6-228 111-346 (376)
242 2ece_A 462AA long hypothetical 99.0 1.2E-07 4.1E-12 74.4 18.9 170 7-207 163-399 (462)
243 3q7m_A Lipoprotein YFGL, BAMB; 99.0 1.7E-06 5.7E-11 67.2 25.1 206 6-227 61-304 (376)
244 3iuj_A Prolyl endopeptidase; h 98.9 3.8E-07 1.3E-11 76.7 21.7 176 7-222 207-408 (693)
245 1kv9_A Type II quinohemoprotei 98.9 4.5E-07 1.5E-11 75.9 21.5 221 6-230 176-499 (668)
246 3hxj_A Pyrrolo-quinoline quino 98.9 2.2E-07 7.4E-12 70.6 18.2 175 7-227 116-291 (330)
247 3v65_B Low-density lipoprotein 98.9 3.4E-06 1.2E-10 65.9 23.3 162 44-227 160-326 (386)
248 3v64_C Agrin; beta propeller, 98.9 5E-06 1.7E-10 64.0 23.9 162 43-227 116-283 (349)
249 3qqz_A Putative uncharacterize 98.8 1E-05 3.5E-10 59.1 23.7 185 43-239 27-233 (255)
250 2ad6_A Methanol dehydrogenase 98.8 3.3E-06 1.1E-10 69.4 21.6 220 6-230 174-505 (571)
251 3hxj_A Pyrrolo-quinoline quino 98.8 7.5E-07 2.6E-11 67.6 16.7 169 7-220 156-325 (330)
252 3v64_C Agrin; beta propeller, 98.8 2.6E-05 8.9E-10 60.0 25.5 156 43-219 73-234 (349)
253 1ijq_A LDL receptor, low-densi 98.8 2.4E-05 8.2E-10 59.3 29.3 204 7-227 9-246 (316)
254 1yiq_A Quinohemoprotein alcoho 98.8 9.4E-07 3.2E-11 74.2 18.2 209 6-227 78-346 (689)
255 1kb0_A Quinohemoprotein alcoho 98.7 7.8E-07 2.7E-11 74.5 17.1 209 7-227 86-354 (677)
256 3v65_B Low-density lipoprotein 98.7 2.9E-05 9.9E-10 60.6 25.0 156 43-219 116-277 (386)
257 1w6s_A Methanol dehydrogenase 98.6 2.5E-05 8.6E-10 64.4 23.1 140 6-160 129-346 (599)
258 2p4o_A Hypothetical protein; p 98.6 6.5E-05 2.2E-09 56.6 25.1 191 43-238 32-263 (306)
259 1flg_A Protein (quinoprotein e 98.6 2.4E-05 8.4E-10 64.3 22.0 164 65-232 291-529 (582)
260 3sov_A LRP-6, low-density lipo 98.6 9.5E-05 3.2E-09 56.1 23.7 177 7-219 12-197 (318)
261 3p5b_L Low density lipoprotein 98.6 0.00013 4.4E-09 57.3 29.7 183 43-227 112-328 (400)
262 3sov_A LRP-6, low-density lipo 98.6 0.0001 3.4E-09 56.0 24.4 162 44-227 80-246 (318)
263 2fp8_A Strictosidine synthase; 98.5 7.2E-05 2.5E-09 56.7 20.8 167 44-219 20-216 (322)
264 2xzh_A Clathrin heavy chain 1; 98.5 0.00015 5E-09 54.5 29.2 184 47-233 71-305 (365)
265 3qqz_A Putative uncharacterize 98.5 0.00015 5.1E-09 53.0 21.6 184 6-217 47-251 (255)
266 1kv9_A Type II quinohemoprotei 98.5 2.4E-05 8.1E-10 65.5 18.5 207 6-227 74-341 (668)
267 3m0c_C LDL receptor, low-densi 98.4 0.00043 1.5E-08 58.9 25.8 165 43-227 471-640 (791)
268 2fp8_A Strictosidine synthase; 98.4 0.00024 8.1E-09 53.8 24.6 162 43-227 80-276 (322)
269 2p9w_A MAL S 1 allergenic prot 98.4 4.1E-05 1.4E-09 57.7 16.8 162 43-219 13-215 (334)
270 2ad6_A Methanol dehydrogenase 98.4 0.00018 6E-09 59.2 21.3 143 6-163 123-342 (571)
271 3tc9_A Hypothetical hydrolase; 98.4 8.2E-05 2.8E-09 58.9 18.7 153 44-218 138-300 (430)
272 3m0c_C LDL receptor, low-densi 98.4 0.00086 3E-08 57.1 28.0 113 43-156 424-545 (791)
273 1bpo_A Protein (clathrin); cla 98.3 0.00055 1.9E-08 53.5 28.4 178 47-227 70-297 (494)
274 1w6s_A Methanol dehydrogenase 98.3 0.00011 3.9E-09 60.5 19.2 211 7-227 72-350 (599)
275 3amr_A 3-phytase; beta-propell 98.3 0.00048 1.7E-08 52.4 24.2 188 6-227 48-272 (355)
276 1n7d_A LDL receptor, low-densi 98.3 4E-06 1.4E-10 70.5 9.9 162 45-227 455-622 (699)
277 4a0p_A LRP6, LRP-6, low-densit 98.3 0.0013 4.4E-08 54.7 24.7 161 43-227 80-245 (628)
278 3pbp_A Nucleoporin NUP82; beta 98.2 0.00054 1.8E-08 53.4 19.0 148 54-215 31-208 (452)
279 3tc9_A Hypothetical hydrolase; 98.2 0.0014 4.8E-08 51.9 24.1 111 43-156 179-300 (430)
280 1ijq_A LDL receptor, low-densi 98.2 0.001 3.6E-08 50.3 23.3 154 65-239 10-173 (316)
281 2xe4_A Oligopeptidase B; hydro 98.2 7.6E-05 2.6E-09 63.4 15.0 109 44-156 175-303 (751)
282 2xe4_A Oligopeptidase B; hydro 98.1 0.00022 7.6E-09 60.6 17.6 119 9-145 202-337 (751)
283 1n7d_A LDL receptor, low-densi 98.1 1.3E-05 4.6E-10 67.3 10.0 156 43-219 406-571 (699)
284 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0026 9E-08 52.8 27.1 178 7-219 14-197 (628)
285 3s94_A LRP-6, low-density lipo 98.1 0.0013 4.6E-08 54.5 21.1 163 43-227 84-251 (619)
286 3s94_A LRP-6, low-density lipo 98.1 0.003 1E-07 52.4 23.5 157 43-220 40-203 (619)
287 4a2l_A BT_4663, two-component 98.1 0.0044 1.5E-07 53.0 26.1 159 43-223 310-484 (795)
288 3p5b_L Low density lipoprotein 98.1 0.0025 8.4E-08 50.0 23.2 161 57-238 85-254 (400)
289 4hw6_A Hypothetical protein, I 98.0 0.0007 2.4E-08 53.6 17.5 154 44-218 140-303 (433)
290 1flg_A Protein (quinoprotein e 98.0 0.00052 1.8E-08 56.5 16.4 140 8-156 291-515 (582)
291 4a2l_A BT_4663, two-component 97.9 0.0077 2.6E-07 51.5 28.8 157 43-222 406-574 (795)
292 2p4o_A Hypothetical protein; p 97.9 0.0038 1.3E-07 46.8 18.3 140 46-208 120-277 (306)
293 1k3i_A Galactose oxidase precu 97.9 0.0027 9.4E-08 53.0 19.0 109 47-156 190-322 (656)
294 3kya_A Putative phosphatase; s 97.9 0.0024 8.3E-08 51.2 17.6 161 44-217 140-339 (496)
295 4hw6_A Hypothetical protein, I 97.8 0.0044 1.5E-07 49.1 18.7 170 45-218 230-432 (433)
296 3amr_A 3-phytase; beta-propell 97.8 0.0057 2E-07 46.6 21.5 167 55-237 40-236 (355)
297 2p9w_A MAL S 1 allergenic prot 97.8 0.0037 1.3E-07 47.3 16.6 110 44-156 64-214 (334)
298 3v9f_A Two-component system se 97.8 0.014 4.8E-07 49.8 22.9 156 43-221 407-570 (781)
299 1xi4_A Clathrin heavy chain; a 97.7 0.0036 1.2E-07 56.1 17.7 178 47-227 70-297 (1630)
300 1k3i_A Galactose oxidase precu 97.7 0.0016 5.3E-08 54.5 14.4 68 45-113 245-322 (656)
301 3kya_A Putative phosphatase; s 97.6 0.02 6.9E-07 45.9 19.2 177 45-225 249-481 (496)
302 3v9f_A Two-component system se 97.5 0.038 1.3E-06 47.2 23.5 156 43-223 313-482 (781)
303 3pbp_A Nucleoporin NUP82; beta 97.5 0.0065 2.2E-07 47.5 14.2 121 91-219 27-158 (452)
304 3ei3_A DNA damage-binding prot 97.4 0.057 1.9E-06 48.2 24.9 177 8-219 807-999 (1158)
305 1tl2_A L10, protein (tachylect 97.4 0.006 2.1E-07 43.3 12.4 103 43-151 41-157 (236)
306 2ism_A Putative oxidoreductase 97.3 0.021 7.1E-07 43.9 15.6 109 84-207 30-153 (352)
307 3a9g_A Putative uncharacterize 97.1 0.055 1.9E-06 41.5 16.6 108 84-207 28-153 (354)
308 3ii7_A Kelch-like protein 7; p 97.1 0.048 1.7E-06 40.6 16.4 153 54-227 101-282 (306)
309 2xbg_A YCF48-like protein; pho 96.8 0.096 3.3E-06 39.6 21.6 147 43-216 36-190 (327)
310 2vpj_A Kelch-like protein 12; 96.8 0.097 3.3E-06 38.8 20.4 162 54-221 62-280 (301)
311 2ism_A Putative oxidoreductase 96.7 0.12 4.2E-06 39.5 18.1 98 43-145 31-153 (352)
312 2xbg_A YCF48-like protein; pho 96.7 0.12 4.1E-06 39.1 23.3 146 43-216 80-231 (327)
313 2xn4_A Kelch-like protein 2; s 96.7 0.12 4E-06 38.4 17.4 98 54-156 108-228 (302)
314 2be1_A Serine/threonine-protei 96.7 0.043 1.5E-06 41.8 11.9 197 5-233 17-246 (339)
315 1tl2_A L10, protein (tachylect 96.6 0.018 6.2E-07 40.9 9.0 140 54-213 3-157 (236)
316 3das_A Putative oxidoreductase 96.6 0.15 5.1E-06 39.0 17.6 103 43-146 32-159 (347)
317 3sre_A PON1, serum paraoxonase 96.6 0.16 5.5E-06 39.0 21.1 165 44-218 51-251 (355)
318 4asc_A Kelch repeat and BTB do 96.6 0.14 4.9E-06 38.3 15.1 90 54-148 98-207 (315)
319 3ii7_A Kelch-like protein 7; p 96.5 0.16 5.4E-06 37.8 15.6 58 54-113 55-126 (306)
320 2xzh_A Clathrin heavy chain 1; 96.4 0.21 7.2E-06 37.8 24.1 191 8-219 87-332 (365)
321 1cru_A Protein (soluble quinop 96.4 0.27 9.4E-06 39.1 20.0 103 43-146 27-163 (454)
322 1zgk_A Kelch-like ECH-associat 96.3 0.23 7.9E-06 37.0 14.5 97 54-156 121-239 (308)
323 1zgk_A Kelch-like ECH-associat 96.2 0.23 8E-06 37.0 14.2 58 54-113 70-145 (308)
324 2xn4_A Kelch-like protein 2; s 96.2 0.24 8.2E-06 36.7 15.1 59 54-113 61-132 (302)
325 3s25_A Hypothetical 7-bladed b 96.1 0.28 9.6E-06 36.7 17.0 82 65-156 88-175 (302)
326 3sbq_A Nitrous-oxide reductase 96.1 0.12 4E-06 42.1 11.6 134 82-226 320-487 (638)
327 2g8s_A Glucose/sorbosone dehyd 96.1 0.27 9.4E-06 37.6 13.6 51 85-137 18-76 (353)
328 3a9g_A Putative uncharacterize 96.0 0.37 1.3E-05 36.9 16.7 101 43-146 29-154 (354)
329 2g8s_A Glucose/sorbosone dehyd 96.0 0.38 1.3E-05 36.8 16.0 101 43-146 18-149 (353)
330 1bpo_A Protein (clathrin); cla 95.9 0.48 1.6E-05 37.4 24.9 191 8-219 86-331 (494)
331 3sre_A PON1, serum paraoxonase 95.6 0.56 1.9E-05 36.0 24.0 172 6-207 81-285 (355)
332 2woz_A Kelch repeat and BTB do 95.4 0.58 2E-05 34.9 14.6 59 54-113 109-183 (318)
333 2uvk_A YJHT; unknown function, 95.0 0.85 2.9E-05 34.6 15.6 30 198-227 315-350 (357)
334 2zwa_A Leucine carboxyl methyl 94.4 2 6.9E-05 36.2 16.8 91 54-146 451-559 (695)
335 3ei3_A DNA damage-binding prot 94.2 3 0.0001 37.5 28.3 71 43-113 554-635 (1158)
336 1xi4_A Clathrin heavy chain; a 93.8 2.1 7E-05 39.3 13.8 86 43-133 106-205 (1630)
337 2vpj_A Kelch-like protein 12; 93.7 1.5 5.1E-05 32.3 14.0 88 54-147 159-263 (301)
338 3sbq_A Nitrous-oxide reductase 93.6 0.55 1.9E-05 38.3 9.2 102 43-145 323-453 (638)
339 1cru_A Protein (soluble quinop 93.5 2.3 7.9E-05 33.8 21.5 60 84-144 26-97 (454)
340 3das_A Putative oxidoreductase 93.3 2.1 7E-05 32.7 16.9 54 83-137 30-90 (347)
341 3no0_A DNA gyrase subunit A; D 93.1 1.9 6.6E-05 31.7 15.5 113 42-156 67-195 (276)
342 4asc_A Kelch repeat and BTB do 92.7 2.3 7.9E-05 31.6 17.1 59 54-113 45-125 (315)
343 2uvk_A YJHT; unknown function, 92.5 2.6 9E-05 31.9 13.0 49 54-103 65-126 (357)
344 2woz_A Kelch repeat and BTB do 91.7 3.1 0.00011 30.9 15.6 59 54-113 56-135 (318)
345 3ott_A Two-component system se 91.2 6.3 0.00022 33.4 24.3 149 43-221 103-262 (758)
346 2be1_A Serine/threonine-protei 91.1 1.3 4.5E-05 33.7 8.2 116 96-229 11-140 (339)
347 2zwa_A Leucine carboxyl methyl 90.5 7.2 0.00025 32.9 13.0 101 54-156 397-521 (695)
348 4gq2_M Nucleoporin NUP120; bet 90.1 0.64 2.2E-05 40.8 6.5 38 190-227 237-274 (950)
349 2wg3_C Hedgehog-interacting pr 89.7 6.6 0.00023 31.3 12.1 53 85-137 14-79 (463)
350 4fhn_B Nucleoporin NUP120; pro 86.6 0.8 2.7E-05 41.0 4.9 38 190-227 239-276 (1139)
351 4gq2_M Nucleoporin NUP120; bet 85.4 5 0.00017 35.3 9.1 38 43-81 236-273 (950)
352 3f7f_A Nucleoporin NUP120; nuc 85.1 2.1 7.1E-05 36.1 6.3 37 190-228 223-259 (729)
353 3s25_A Hypothetical 7-bladed b 84.7 10 0.00035 28.2 20.9 99 49-157 110-216 (302)
354 3qhy_B Beta-lactamase inhibito 84.4 10 0.00035 27.8 12.4 27 190-219 220-246 (282)
355 3q6k_A 43.2 kDa salivary prote 84.0 13 0.00044 28.8 21.6 141 8-156 123-305 (381)
356 3qhy_B Beta-lactamase inhibito 82.5 12 0.00042 27.4 12.5 104 43-156 63-167 (282)
357 2wg3_C Hedgehog-interacting pr 80.7 20 0.00068 28.6 15.4 104 43-147 14-159 (463)
358 3q6k_A 43.2 kDa salivary prote 73.7 29 0.001 26.8 16.8 142 66-219 124-306 (381)
359 4a9v_A PHOX; hydrolase, beta-p 72.0 35 0.0012 28.2 9.4 59 86-145 477-549 (592)
360 3f7f_A Nucleoporin NUP120; nuc 71.3 8.5 0.00029 32.6 5.9 35 44-81 223-257 (729)
361 3zwu_A Alkaline phosphatase PH 71.3 23 0.00077 29.3 8.3 58 44-102 477-548 (592)
362 4fhn_B Nucleoporin NUP120; pro 70.5 3.9 0.00013 36.7 4.1 37 44-81 239-275 (1139)
363 3zwu_A Alkaline phosphatase PH 70.2 29 0.00098 28.7 8.7 57 87-144 478-548 (592)
364 3uc1_A DNA gyrase subunit A; D 67.9 37 0.0012 25.6 13.9 113 43-156 146-278 (327)
365 3ott_A Two-component system se 64.0 66 0.0023 27.2 22.4 108 43-156 146-259 (758)
366 4a9v_A PHOX; hydrolase, beta-p 61.7 68 0.0023 26.5 9.2 60 43-103 476-549 (592)
367 3uc1_A DNA gyrase subunit A; D 58.7 56 0.0019 24.6 19.3 113 43-156 95-227 (327)
368 1wp5_A Topoisomerase IV; broke 53.9 68 0.0023 24.1 16.7 113 43-156 92-224 (323)
369 1suu_A DNA gyrase subunit A; t 52.9 68 0.0023 23.9 18.1 161 43-218 47-230 (312)
370 3b7f_A Glycosyl hydrolase, BNR 48.3 88 0.003 23.8 15.6 106 43-151 55-202 (394)
371 3b7f_A Glycosyl hydrolase, BNR 45.4 99 0.0034 23.5 15.9 98 55-153 22-143 (394)
372 4hvt_A Ritya.17583.B, post-pro 44.1 1.5E+02 0.0051 25.2 19.0 33 188-221 349-383 (711)
373 2cn3_A Xyloglucanase, beta-1,4 40.6 1.7E+02 0.0058 24.8 13.7 102 44-146 24-152 (737)
374 1sqj_A OXG-RCBH, oligoxylogluc 36.9 2E+02 0.0069 24.7 17.7 105 43-148 15-143 (789)
375 1wp5_A Topoisomerase IV; broke 36.3 1.3E+02 0.0046 22.4 18.1 161 43-218 39-224 (323)
376 1suu_A DNA gyrase subunit A; t 35.6 1.3E+02 0.0046 22.3 17.7 149 54-218 7-180 (312)
377 1q47_A Semaphorin 3A; beta pro 33.0 1.9E+02 0.0066 23.3 8.5 65 44-108 405-485 (495)
378 3l6v_A GYRA, DNA gyrase subuni 32.7 1.7E+02 0.0057 22.5 19.5 71 43-113 99-179 (370)
379 3al9_A Plexin-A2; beta-propell 27.6 2.5E+02 0.0086 22.9 7.7 27 188-214 449-476 (539)
380 1zvt_A Topoisomerase IV subuni 27.1 1.7E+02 0.006 20.9 13.0 146 57-218 4-162 (256)
381 3mez_B Mannose-specific lectin 25.2 1.2E+02 0.0041 18.4 9.6 24 89-113 60-83 (113)
382 1q47_A Semaphorin 3A; beta pro 24.7 2.6E+02 0.0089 22.5 7.0 27 188-214 461-487 (495)
383 4gz8_A Semaphorin-3A; multi-do 23.4 3.4E+02 0.012 22.9 8.5 70 43-112 412-497 (667)
384 3d8d_A Amyloid beta A4 precurs 20.2 1.5E+02 0.0051 19.4 3.9 22 7-28 63-84 (148)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-42 Score=264.51 Aligned_cols=218 Identities=20% Similarity=0.290 Sum_probs=196.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~ 84 (239)
.||.|++||+++++.+..+..|. .+|.+++|+| ++++|++|+.|++|++||+.+++.+..+ .|.
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~ 97 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVTE--------------TPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCcEEEEECCCCceeEEeeccC--------------CcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCC
Confidence 58999999999999999999998 9999999999 8999999999999999999999988888 699
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
..|.+++|+|+++++++++ |+.|++||++........+.+|...|.+++|+| ++..|++|+.|+.|++||++ .....
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 9999999999999999998 899999999855577788899999999999999 67899999999999999985 22111
Q ss_pred -------------------------eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 162 -------------------------SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 162 -------------------------~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
+...++.|++||+++ .+++..+.+|...|.+++|+|++++|++|+.||.|++||
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256 (304)
T ss_dssp EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 112345699999987 788899999999999999999999999999999999999
Q ss_pred ccCCeeeEEec-CCCCeeeeEecC
Q psy11036 217 MVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.+++.++.+. +...+.+++|+|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 257 SSTYKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp TTTCCEEEEECCSSSSEEEEEECT
T ss_pred CCCCceeeeccCCCccEEEEEECC
Confidence 99999999998 677999999876
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-41 Score=265.78 Aligned_cols=218 Identities=22% Similarity=0.348 Sum_probs=199.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|+|||+.+++...++.+|. +.|.+++|+| ++++|++|+.|++|++||+.+++++..+ .|
T Consensus 127 s~Dg~i~vwd~~~~~~~~~l~~h~--------------~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 191 (410)
T 1vyh_C 127 SEDATIKVWDYETGDFERTLKGHT--------------DSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGH 191 (410)
T ss_dssp ESSSCEEEEETTTCCCCEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCC
T ss_pred eCCCeEEEEECCCCcEEEEEeccC--------------CcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC
Confidence 468999999999999999999999 9999999999 7899999999999999999999888887 69
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
...|.+++|+|++.++++++ |+.|++||++ .+..+..+.+|...|.++.++|++.+|++++.|+.|++||++ .+...
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 99999999999999999988 8999999999 788889999999999999999999999999999999999987 43332
Q ss_pred ee------------------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC
Q psy11036 162 SF------------------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 199 (239)
Q Consensus 162 ~~------------------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~ 199 (239)
.+ ..++.|++||+++ +.++..+.+|...|.+++|+|+
T Consensus 271 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~ 349 (410)
T 1vyh_C 271 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSG 349 (410)
T ss_dssp EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSS
T ss_pred EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCC
Confidence 22 2245599999987 6788899999999999999999
Q ss_pred CCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 200 GKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 200 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+++|++|+.|+.|++||+.+++++..+. |...|++++|+|
T Consensus 350 g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 390 (410)
T 1vyh_C 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390 (410)
T ss_dssp SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECS
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcC
Confidence 9999999999999999999999999988 888999999987
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=250.65 Aligned_cols=200 Identities=23% Similarity=0.329 Sum_probs=186.6
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.|+.|++||+.+++.+..+..+. ..+.+++|+| ++++|++++.||.|++|++++++....+ .
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~--------------~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~ 162 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGP--------------VDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDT 162 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCT--------------TCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEEC
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCC--------------ccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecC
Confidence 3578999999999999999999888 8899999999 8999999999999999999999888777 5
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEe
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
+...+.+++|+|+++++++++ |+.|++||++ .++.+..+.+|..+|.+++|+|++++|++++.|+.|++||++
T Consensus 163 ~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~----- 236 (321)
T 3ow8_A 163 RGKFILSIAYSPDGKYLASGAIDGIINIFDIA-TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ----- 236 (321)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT-----
T ss_pred CCceEEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC-----
Confidence 788899999999999999998 8999999998 888999999999999999999999999999999999999988
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
..+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++++.++. |...|.+++|+|
T Consensus 237 ---------------~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 237 ---------------HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 300 (321)
T ss_dssp ---------------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ---------------CcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC
Confidence 456667778999999999999999999999999999999999999999987 888999999987
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=252.02 Aligned_cols=199 Identities=18% Similarity=0.179 Sum_probs=172.0
Q ss_pred CCCCEEEEeeCCCcceeee----eeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 5 LPILIVALWDIPSEAQVST----FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
+.||.|+|||+++++.+.. +.+|. +.|++++|+| ++++|++|+.|++|++||+++++++..
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~--------------~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHD--------------DIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCC--------------CCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 5689999999998876544 34787 9999999999 899999999999999999999999888
Q ss_pred e-cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEEe--ccCCceEEEEEcCC-CCEEEEEecCCeEEEEE
Q psy11036 81 V-NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASG-GKRLISASLDHHAKIYE 154 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d 154 (239)
+ .|...|.+++|+|++. ++++++ |+.|++||++ .++....+. .+...+.+++|+|+ +++|++|+.|+.|++||
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR-CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT-SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EcCcCCceEEEEecCCCCCceeeecccccccccccc-ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 8 6999999999999875 677777 8999999998 666666653 45667999999995 56889999999999999
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEEEEEccCCeeeEEecCCCCee
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMVNFSPVHTLDYPSPVL 233 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~ 233 (239)
++ ..+++..+.+|...|.+++|+|++ ++|++|+.|++|+|||+.+++.+....|.+.|+
T Consensus 244 ~~--------------------~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~ 303 (344)
T 4gqb_B 244 TK--------------------STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVR 303 (344)
T ss_dssp SC--------------------C--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEE
T ss_pred CC--------------------CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEE
Confidence 88 466777789999999999999997 589999999999999999998877666999999
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+++|||
T Consensus 304 ~v~~sp 309 (344)
T 4gqb_B 304 DATWSP 309 (344)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999997
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.6e-39 Score=249.61 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=174.5
Q ss_pred CCEEEEeeCCCcceeee----eeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee--
Q psy11036 7 ILIVALWDIPSEAQVST----FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-- 80 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-- 80 (239)
|+.|++|+..++.+... ...|. ..|++++|+| ++ .+++++.||+|++||+.+++....
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~~~~~--------------~~V~~~~~s~-d~-~~l~~s~dg~v~lWd~~~~~~~~~~~ 132 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAGVQTE--------------AGVTDVAWVS-EK-GILVASDSGAVELWEILEKESLLVNK 132 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEEEECS--------------SCEEEEEEET-TT-EEEEEETTSCEEEC--------CCCC
T ss_pred cCeEEEEECCCCCcceeEecccCCCC--------------CCEEEEEEcC-CC-CEEEEECCCEEEEeeccccceeEEEe
Confidence 68899999887765433 34565 8899999999 55 456788899999999988765432
Q ss_pred ---ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEc
Q psy11036 81 ---VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEM 155 (239)
Q Consensus 81 ---~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~ 155 (239)
..|...|.+++|+|++++|++++ |+.|++||++ .++.+..+.+|...|.+++|+|++. .+++++.|+.|++||+
T Consensus 133 ~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~-~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 133 FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS-QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 25889999999999999999988 8999999998 8899999999999999999999875 7899999999999998
Q ss_pred c-cceEeee-------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcC
Q psy11036 156 T-LKTVSSF-------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASL 208 (239)
Q Consensus 156 ~-~~~~~~~-------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~ 208 (239)
+ ++....+ ..++.|++||+++ .+++..+.+|...|.+++|+|++ ++|++|+.
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEET
T ss_pred CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeC
Confidence 7 3322211 1234599999987 66778889999999999999987 68999999
Q ss_pred CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 209 DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
|++|+|||+++++.+..+.|.+.|++++|||
T Consensus 291 D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP 321 (357)
T 4g56_B 291 DCTVAVLDADFSEVFRDLSHRDFVTGVAWSP 321 (357)
T ss_dssp TSCEEEECTTSCEEEEECCCSSCEEEEEECS
T ss_pred CCEEEEEECCCCcEeEECCCCCCEEEEEEeC
Confidence 9999999999999999888999999999997
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-37 Score=238.60 Aligned_cols=218 Identities=18% Similarity=0.325 Sum_probs=188.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----ceee
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD----PVMS 80 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~----~~~~ 80 (239)
+.||.|++||+.+++.+..+..|. ..|.+++|+| ++++|++|+.|+.+++|++.+.+ ....
T Consensus 74 s~Dg~v~iWd~~~~~~~~~~~~~~--------------~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~ 138 (340)
T 1got_B 74 SQDGKLIIWDSYTTNKVHAIPLRS--------------SWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRE 138 (340)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSS--------------SCEEEEEECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEE
T ss_pred eCCCcEEEEECCCCCcceEeecCC--------------ccEEEEEECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEE
Confidence 568999999999999999999998 9999999999 89999999999999999998764 2233
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
+ .|...+.++.|++++.++.++.|+.|++||++ .++.+..+.+|...|.+++|+|+++++++++.|+.|++||++ +.
T Consensus 139 ~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE-TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp EECCSSCEEEEEEEETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred ecCCCccEEEEEECCCCcEEEEECCCcEEEEECC-CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 3 68999999999998875555559999999998 888899999999999999999999999999999999999998 55
Q ss_pred eEeee----------------------ecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 159 TVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 159 ~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
.+..+ ..++.+++||++. .+.+..+.. +...|.+++|+|++++|++|+.|+.|++
T Consensus 218 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~v 296 (340)
T 1got_B 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEE
Confidence 54444 2245599999987 444444432 3357999999999999999999999999
Q ss_pred EEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
||+.+++.+..+. |.++|.+++|+|
T Consensus 297 wd~~~~~~~~~~~~h~~~v~~~~~s~ 322 (340)
T 1got_B 297 WDALKADRAGVLAGHDNRVSCLGVTD 322 (340)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEcccCcEeeEeecCCCcEEEEEEcC
Confidence 9999999998887 889999999987
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.9e-38 Score=240.35 Aligned_cols=199 Identities=20% Similarity=0.330 Sum_probs=181.1
Q ss_pred CCCCCEEEEeeCCC-----cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 4 DLPILIVALWDIPS-----EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 4 ~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
.+.|++|++||+.+ +.++..+.+|. ..|.+++|+| ++++|++|+.|++|++||+.+++..
T Consensus 36 ~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 36 ASRDKTLISWKLTGDDQKFGVPVRSFKGHS--------------HIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp EETTSEEEEEEEEEETTEEEEEEEEEECCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ecCCccEEEecCCCCCccccccceEEeCCc--------------ccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCee
Confidence 35789999999864 34567888998 9999999999 8999999999999999999999988
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC------CCEEEEEecCCeE
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG------GKRLISASLDHHA 150 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~------~~~l~~~~~d~~i 150 (239)
..+ .|...|.+++|+|++.++++++ |+.|++||++ ++.+..+.+|...|.+++++|. +..+++++.|+.|
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 887 7999999999999999999998 8999999996 5677888899999999999985 4489999999999
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCC
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS 230 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 230 (239)
++||++ ..+....+.+|...|.+++|+|++++|++++.||.|++||+.+++++..+....
T Consensus 179 ~~wd~~--------------------~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 238 (319)
T 3frx_A 179 KAWNLN--------------------QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD 238 (319)
T ss_dssp EEEETT--------------------TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS
T ss_pred EEEECC--------------------cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 999988 466677778999999999999999999999999999999999999999999889
Q ss_pred CeeeeEecC
Q psy11036 231 PVLSIDVSM 239 (239)
Q Consensus 231 ~v~~~~~sp 239 (239)
+|.+++|+|
T Consensus 239 ~v~~~~~sp 247 (319)
T 3frx_A 239 EVFSLAFSP 247 (319)
T ss_dssp CEEEEEECS
T ss_pred cEEEEEEcC
Confidence 999999997
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=240.26 Aligned_cols=200 Identities=24% Similarity=0.283 Sum_probs=183.2
Q ss_pred CCCCCEEEEeeCCCcce--eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 4 DLPILIVALWDIPSEAQ--VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.+.|++|+|||+.+++. ...+.+|. ..|.+++|++ ++.++++++.|++|++||+.+++.+..+
T Consensus 54 gs~D~~v~vW~~~~~~~~~~~~l~gh~--------------~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~ 118 (321)
T 3ow8_A 54 GSLDDLVKVWKWRDERLDLQWSLEGHQ--------------LGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSI 118 (321)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCS--------------SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEECCCCCeeeeeeeccCC--------------CCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEE
Confidence 36789999999977653 45688898 9999999999 7899999999999999999999888877
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
.+...+.+++|+|+++++++++ ++.+++|+++ .++....+..|...|.+++|+|++++|++++.|+.|++||++
T Consensus 119 ~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~--- 194 (321)
T 3ow8_A 119 DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE-SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA--- 194 (321)
T ss_dssp ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT-TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT---
T ss_pred eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC-CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC---
Confidence 5778899999999999999999 7999999999 777788888899999999999999999999999999999988
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
.++++..+.+|..+|.+++|+|++++|++++.|+.|++||+++++.+..+. |...|.+++|+
T Consensus 195 -----------------~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 195 -----------------TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp -----------------TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred -----------------CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 567777888999999999999999999999999999999999999998888 88899999998
Q ss_pred C
Q psy11036 239 M 239 (239)
Q Consensus 239 p 239 (239)
|
T Consensus 258 p 258 (321)
T 3ow8_A 258 P 258 (321)
T ss_dssp T
T ss_pred C
Confidence 7
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.3e-37 Score=233.74 Aligned_cols=218 Identities=23% Similarity=0.357 Sum_probs=192.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++|++.+++....+.+|. ..|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|
T Consensus 42 ~~dg~i~iw~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 106 (312)
T 4ery_A 42 SADKLIKIWGAYDGKFEKTISGHK--------------LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 106 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred eCCCeEEEEeCCCcccchhhccCC--------------CceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCC
Confidence 468999999999999999999998 9999999999 8999999999999999999999988888 68
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
...|.+++|+|+++++++++ |+.|++||++ .++.+..+..|..+|.+++|+|++++|++++.|+.|++||++ ++.+.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVK-TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 185 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 99999999999999999998 8999999998 788888999999999999999999999999999999999998 44443
Q ss_pred ee-----------------------ecceeEEEEEccCCCEEEEEEecccCcEEE--EEE-ccCCCeEEEEcCCceEEEE
Q psy11036 162 SF-----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTS--LCL-ASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 162 ~~-----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~--~~~-s~~~~~l~s~s~d~~i~iw 215 (239)
.+ ..++.+++||+++ .+.+..+.+|...+.. ..+ .+++.+|++|+.||.|++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vw 264 (312)
T 4ery_A 186 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 264 (312)
T ss_dssp EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEE
T ss_pred EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEE
Confidence 32 2345699999987 6777888888765332 233 3678999999999999999
Q ss_pred EccCCeeeEEec-CCCCeeeeEecC
Q psy11036 216 EMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 216 d~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
|+.+++.+..+. |...|.+++|+|
T Consensus 265 d~~~~~~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 265 NLQTKEIVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECS
T ss_pred ECCCchhhhhhhccCCcEEEEeecC
Confidence 999999999998 888999999987
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.5e-37 Score=232.14 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=179.9
Q ss_pred ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCc
Q psy11036 19 AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGG 97 (239)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 97 (239)
+..+++.+|. +.|++++|+| ++++|++++.||+|++||+.+++.+..+ .|..+|.+++|+|+++
T Consensus 4 ~~~~~~~~h~--------------~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 68 (304)
T 2ynn_A 4 DIKKTFSNRS--------------DRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68 (304)
T ss_dssp CCEEEEEEEC--------------SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred eeEEeecCCC--------------CceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC
Confidence 4566788888 9999999999 8999999999999999999999888887 5889999999999999
Q ss_pred EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c-ceEeee-----------
Q psy11036 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L-KTVSSF----------- 163 (239)
Q Consensus 98 ~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~~~~----------- 163 (239)
++++++ |+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|++|++||++ . .....+
T Consensus 69 ~l~s~s~d~~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp EEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred EEEEECCCCEEEEEECC-CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 999998 7999999998 788899999999999999999999999999999999999987 3 222222
Q ss_pred ------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc--CCCeEEEEcCCceEEEEEccCCeeeEEec-C
Q psy11036 164 ------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEMVNFSPVHTLD-Y 228 (239)
Q Consensus 164 ------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~ 228 (239)
..++.|++||++..........+|...+..+.|+| ++++|++++.|+.|++||+++++++.++. |
T Consensus 148 ~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp ECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 22455999999875555545556778899999987 77899999999999999999999999998 8
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
...|.+++|+|
T Consensus 228 ~~~v~~~~~~p 238 (304)
T 2ynn_A 228 MSNVSFAVFHP 238 (304)
T ss_dssp SSCEEEEEECS
T ss_pred CCCEEEEEECC
Confidence 88999999987
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-36 Score=238.91 Aligned_cols=210 Identities=23% Similarity=0.377 Sum_probs=180.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.|+.|++||+++++.+..+.+|. ..|.+++|+| ++++|++++.|++|++||+++++....+.+.
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~--------------~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHE--------------QDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred cCCCeEEEEECCCCcEEEEEccCC--------------CCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence 458999999999999999999998 9999999999 7899999999999999999999888888888
Q ss_pred CCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEE-------eccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 85 SPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKF-------TCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 85 ~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
..+.+++|+| ++.++++++ |+.|++||++ .++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETT-TCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 8999999999 899999988 8999999998 66666665 578999999999999999999999999999999
Q ss_pred c-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCee
Q psy11036 156 T-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 156 ~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+ ....... .......+...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++..+. |...|.
T Consensus 286 ~~~~~~~~~---------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~ 356 (393)
T 1erj_A 286 QNANNKSDS---------KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 356 (393)
T ss_dssp ------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCCcccc---------cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEE
Confidence 8 2211111 0001234566778999999999999999999999999999999999999999988 888999
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+++|+|
T Consensus 357 ~v~~~~ 362 (393)
T 1erj_A 357 SVAVAN 362 (393)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 999875
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-36 Score=239.43 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=178.2
Q ss_pred CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe
Q psy11036 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 40 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
.|.++|++++|+| ++.+|++|+.||+|++||+.+++....+ .|...|.+++|+|+++++++++ |+.|++||+. ..+
T Consensus 106 gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~-~~~ 183 (410)
T 1vyh_C 106 GHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFE 183 (410)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-SSC
T ss_pred ccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCc
Confidence 3449999999999 7899999999999999999999988888 6999999999999999999998 8999999998 788
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee----------------------ecceeEEEEEc
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF----------------------TGGLDVCIWDM 174 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------~~~~~i~~~d~ 174 (239)
.+..+.+|...|.+++|+|++++|++++.|+.|++||++ +.++..+ ..++.+++||+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 888999999999999999999999999999999999998 6555544 22455999999
Q ss_pred cCCCEEEEEEecccCcEEEEEEccC--------------------CCeEEEEcCCceEEEEEccCCeeeEEec-CCCCee
Q psy11036 175 LGGGKLLHKFTCHHKTVTSLCLASG--------------------GKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 175 ~~~~~~~~~~~~h~~~v~~~~~s~~--------------------~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
.+ .+....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.+++++..+. |...|.
T Consensus 264 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~ 342 (410)
T 1vyh_C 264 AT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342 (410)
T ss_dssp TT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred CC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEE
Confidence 87 5677788999999999999996 6789999999999999999999999987 888999
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+++|+|
T Consensus 343 ~v~~~~ 348 (410)
T 1vyh_C 343 GVLFHS 348 (410)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999987
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=231.02 Aligned_cols=218 Identities=21% Similarity=0.275 Sum_probs=188.1
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC------ce
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD------PV 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~------~~ 78 (239)
+.||.|++||..+++....+..|. ..|.+++|+| ++.++++|+.|+.+++|++.... ..
T Consensus 83 s~Dg~v~vWd~~~~~~~~~~~~~~--------------~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~ 147 (354)
T 2pbi_B 83 SQDGKVIVWDSFTTNKEHAVTMPC--------------TWVMACAYAP-SGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSS--------------SCCCEEEECT-TSSEEEEESTTSEEEEEECCCCTTCCSGGGC
T ss_pred eCCCeEEEEECCCCCcceEEecCC--------------CCEEEEEECC-CCCEEEEeeCCCCEEEEEEeccccccccccc
Confidence 568999999999999999999888 8999999999 89999999999999999986542 22
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC--CCCEEEEEecCCeEEEEE
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYE 154 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~--~~~~l~~~~~d~~i~i~d 154 (239)
..+ .|...|.+++|+|++..+++++ |+.|++||++ .++.+..+.+|...|.+++|+| ++++|++|+.|+.|++||
T Consensus 148 ~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE-SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEE
T ss_pred eeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 333 5899999999999999998888 8999999998 7888999999999999999987 568999999999999999
Q ss_pred cc-cceEeee----------------------ecceeEEEEEccCCCEEEEEEecc--cCcEEEEEEccCCCeEEEEcCC
Q psy11036 155 MT-LKTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCH--HKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 155 ~~-~~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d 209 (239)
++ ++++..+ ..++.+++||++.. +.+..+..+ ...+.+++|+|++++|++|+.|
T Consensus 227 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 227 MRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCcccceeEEEEeCCCCEEEEEECC
Confidence 98 5555544 22455999999874 444444433 3578999999999999999999
Q ss_pred ceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 210 HHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.|++||+.+++.+..+. |...|++++|+|
T Consensus 306 ~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred CcEEEEECCCCceEEEEECCCCcEEEEEECC
Confidence 999999999999998887 889999999997
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-36 Score=249.37 Aligned_cols=214 Identities=21% Similarity=0.284 Sum_probs=186.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSP 86 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~ 86 (239)
+.|++|| +++...++.+|. ..|.+++|+|++...|++|+.|++|++||..+++....+ +|...
T Consensus 129 ~~v~~wd--~~~~~~~l~gh~--------------~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 129 GHVFLFD--TGTSNGNLTGQA--------------RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 192 (611)
T ss_dssp EEEEETT--TCCBCBCCCCCS--------------SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSC
T ss_pred eEEEEee--CCCCcceecCCC--------------CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCc
Confidence 5788888 466777889998 999999999944457999999999999999888877777 69999
Q ss_pred EEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe-------ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 87 VESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT-------CHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
|.+++|+|++++|++++ |+.|++||+. .++....+. +|.+.|.+++|+|++++|++++.|++|++||++ +
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~-~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGV-DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECC-CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99999999999999998 8999999998 677777774 799999999999999999999999999999998 5
Q ss_pred ceEeee-----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 158 KTVSSF-----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 158 ~~~~~~-----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
+.+..+ ..++.+++||... .++...+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~-~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL-GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC-CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 554433 2345689999876 5677788999999999999999999999999999999
Q ss_pred EEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
||+.+++....+. |...|.+++|+|
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~ 377 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTS 377 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECT
T ss_pred EECCCCceeeecccCCcceEEEEEECC
Confidence 9999998877653 778899998864
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.3e-36 Score=248.54 Aligned_cols=218 Identities=21% Similarity=0.298 Sum_probs=183.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.|+.|++||..+++...++.+|. +.|.+++|+| ++++|++++.|++|++||+.+++....+
T Consensus 167 s~D~~v~lwd~~~~~~~~~l~~H~--------------~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 167 SDDNTVAIFEGPPFKFKSTFGEHT--------------KFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp ETTSCEEEEETTTBEEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCT
T ss_pred eCCCeEEEEECCCCeEeeeecccc--------------CceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccc
Confidence 468999999999999999999999 9999999999 8999999999999999999999887766
Q ss_pred -----cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE------------------------------------
Q psy11036 82 -----NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL------------------------------------ 119 (239)
Q Consensus 82 -----~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~------------------------------------ 119 (239)
.|...|.+++|+|++++|++++ |+.|++||++ .++.+
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA-TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC-CCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 5889999999999999999998 8999999997 44433
Q ss_pred -------EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee----------------------------
Q psy11036 120 -------HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF---------------------------- 163 (239)
Q Consensus 120 -------~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~---------------------------- 163 (239)
..+.+|...|.+++|+|+|++|++++.|+.|++||+. ++....+
T Consensus 311 ~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v 390 (611)
T 1nr0_A 311 PELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHL 390 (611)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEE
T ss_pred CCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCce
Confidence 3445789999999999999999999999999999976 2211100
Q ss_pred ----------------------------------------------------------------------------ecce
Q psy11036 164 ----------------------------------------------------------------------------TGGL 167 (239)
Q Consensus 164 ----------------------------------------------------------------------------~~~~ 167 (239)
..++
T Consensus 391 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~ 470 (611)
T 1nr0_A 391 KVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDS 470 (611)
T ss_dssp EEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCC
Confidence 1123
Q ss_pred eEEEEEccCCCE-EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC-CeeeEE--ec-CCCCeeeeEecC
Q psy11036 168 DVCIWDMLGGGK-LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN-FSPVHT--LD-YPSPVLSIDVSM 239 (239)
Q Consensus 168 ~i~~~d~~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~--~~-~~~~v~~~~~sp 239 (239)
.|++||+.+... .... .+|...|.+++|+|+|++|++++.|++|++||+.+ ++.+.. +. |...|++++|+|
T Consensus 471 ~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp 546 (611)
T 1nr0_A 471 KVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 546 (611)
T ss_dssp EEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT
T ss_pred eEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC
Confidence 478888765422 2233 67999999999999999999999999999999987 666554 34 888999999998
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.2e-36 Score=232.22 Aligned_cols=197 Identities=21% Similarity=0.324 Sum_probs=171.4
Q ss_pred CCCCEEEEeeCCCc-------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 5 LPILIVALWDIPSE-------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 5 ~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
+.|++|++||+.+. .+...+.+|. ..|.+++|+| ++.++++|+.|++|++||+++++.
T Consensus 46 s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--------------~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 46 SRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--------------HFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTT 110 (343)
T ss_dssp ETTSCEEEEEECSSCCSSBSEEEEEEECCCS--------------SCEEEEEECS-STTEEEEEETTSEEEEEETTSSCE
T ss_pred cCCCEEEEEECCcCCcccccccccchhccCC--------------CceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 56899999998753 4566788888 9999999999 899999999999999999999998
Q ss_pred eeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe---ccCCceEEEEEcCCC----------CEEE
Q psy11036 78 VMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT---CHHKTVTSLCLASGG----------KRLI 142 (239)
Q Consensus 78 ~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~---~~~~~i~~i~~~~~~----------~~l~ 142 (239)
...+ .|...|.+++|+|+++++++++ |+.|++||+. .. ...... .|...|.+++|+|++ .+|+
T Consensus 111 ~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~ 188 (343)
T 2xzm_R 111 YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-GE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFA 188 (343)
T ss_dssp EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-SC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEE
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-CC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEE
Confidence 8887 7999999999999999999988 8999999997 33 333333 688899999999987 7899
Q ss_pred EEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc-CCe
Q psy11036 143 SASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFS 221 (239)
Q Consensus 143 ~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~ 221 (239)
+++.|+.|++||.. .+....+.+|...|.+++|+|++++|++|+.||.|++||+. ...
T Consensus 189 s~~~d~~i~iwd~~---------------------~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 189 SVGWDGRLKVWNTN---------------------FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp EEETTSEEEEEETT---------------------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred EEcCCCEEEEEcCC---------------------CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 99999999999965 55666778999999999999999999999999999999994 455
Q ss_pred eeEEecCCCCeeeeEecC
Q psy11036 222 PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 222 ~~~~~~~~~~v~~~~~sp 239 (239)
+...+.+...|.+++|+|
T Consensus 248 ~~~~~~~~~~v~~v~~sp 265 (343)
T 2xzm_R 248 PQREFDAGSTINQIAFNP 265 (343)
T ss_dssp CSEEEECSSCEEEEEECS
T ss_pred cceeecCCCcEEEEEECC
Confidence 666666777899999987
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-36 Score=229.99 Aligned_cols=204 Identities=18% Similarity=0.212 Sum_probs=165.6
Q ss_pred CCCCCCEEEEeeCCCc--ceeeee-eC-CceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC---
Q psy11036 3 HDLPILIVALWDIPSE--AQVSTF-TN-HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP--- 75 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~--- 75 (239)
+.+.|+.|++||+.++ +....+ .. |. ..|.+++|+| ++++|++|+.|++|++||+...
T Consensus 29 s~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--------------~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYDDFTLIDVLDETAHK--------------KAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp EEESSSCEEEEECSSSCCEEEEEECTTCCC--------------SCEEEEEECT-TSSEEEEEETTSCEEEEEC------
T ss_pred EEcCCCEEEEEEecCCCeEEEEEEecCCcc--------------CCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCc
Confidence 3467999999999875 344555 34 77 8999999999 7999999999999999998532
Q ss_pred ----Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC---CeEEEEEeccCCceEEEEEcCCCCEEEEEec
Q psy11036 76 ----DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG---GKLLHKFTCHHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 76 ----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~---~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
+....+ .|...|.+++|+|++++|++++ |+.|++||++.. .+.+..+.+|...|.+++|+|++.+|++++.
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 234445 6899999999999999999998 899999999523 3567788899999999999999999999999
Q ss_pred CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC--CCeEEEEcCCceEEEEEccCC----
Q psy11036 147 DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMVNF---- 220 (239)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~---- 220 (239)
|++|++||... ...+++..+.+|...|.+++|+|+ +.+|++++.|++|++||+.++
T Consensus 174 D~~i~iW~~~~------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 174 DDTVRIWKDYD------------------DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD 235 (330)
T ss_dssp TSCEEEEEEET------------------TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS
T ss_pred CCeEEEEECCC------------------CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc
Confidence 99999999861 112566778899999999999998 678999999999999999764
Q ss_pred ----eeeEEec--CCCCeeeeEecC
Q psy11036 221 ----SPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 221 ----~~~~~~~--~~~~v~~~~~sp 239 (239)
.....+. |...|.+++|+|
T Consensus 236 ~~~~~~~~~~~~~h~~~v~~v~~s~ 260 (330)
T 2hes_X 236 QQEWVCEAILPDVHKRQVYNVAWGF 260 (330)
T ss_dssp CEEEEEEEECCSCCSSCEEEEEECT
T ss_pred cceeEEeeecccccccceEEEEEcC
Confidence 3444444 678999999975
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9e-36 Score=230.11 Aligned_cols=194 Identities=19% Similarity=0.385 Sum_probs=171.4
Q ss_pred CCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 5 LPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 5 ~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
+.|+.|++||+.++ +....+.+|. +.|.++.|++ ++ .+++++.|++|++||+++++.+..
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVSRELAGHT--------------GYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEEEEEECCS--------------SCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEE
T ss_pred eCCCeEEEEECccCCCcceeEEEecCCC--------------ccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEE
Confidence 46899999999865 3456778888 9999999998 44 588999999999999999998888
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
+ .|...|.+++|+|+++++++++ |+.|++||++ .+.....+.+|...|.+++|+|++++|++++.|+.|++||++ .
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 8 6899999999999999999998 8999999998 788889999999999999999999999999999999999998 4
Q ss_pred ceEeee------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEE
Q psy11036 158 KTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 158 ~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
+.+..+ ..++.+++||+.+ .+.+..+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 433322 2345699999886 567788899999999999999999999999999999
Q ss_pred EEE
Q psy11036 214 IYE 216 (239)
Q Consensus 214 iwd 216 (239)
|||
T Consensus 338 iWd 340 (340)
T 1got_B 338 IWN 340 (340)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=232.23 Aligned_cols=181 Identities=20% Similarity=0.282 Sum_probs=156.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-- 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-- 82 (239)
+.||.|++||+++++++.++.+|. +.|++++|+|++..+|++++.|++|++||++++++...+.
T Consensus 146 s~d~~i~iwd~~~~~~~~~~~~h~--------------~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 146 SKDICIKVWDLAQQVVLSSYRAHA--------------AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred eCCCeEEEEECCCCcEEEEEcCcC--------------CceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 468999999999999999999999 9999999999656789999999999999999999888763
Q ss_pred -CCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccc
Q psy11036 83 -HGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 83 -~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~ 158 (239)
+...+.+++|+|+ +.++++++ |+.|++||++ .++.+..+.+|...|++++|+|++ ++|++|+.|++|+|||++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~-- 288 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK-STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS-- 288 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESC-C--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT--
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECC-CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC--
Confidence 5567999999995 56777777 8999999999 788889999999999999999998 579999999999999987
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccCCe
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~ 221 (239)
.++ +..+.+|...|.+++|+|+++ +|++++.|++|++|++.+..
T Consensus 289 ------------------~~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 289 ------------------LSE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ------------------CCE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred ------------------CCc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 233 345688999999999999886 56799999999999997653
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.3e-35 Score=225.99 Aligned_cols=198 Identities=18% Similarity=0.336 Sum_probs=168.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.|+.|++||+++++.+..+.+|. ..|.+++|+| ++.+|++|+.|++|++||++. +.+..+ .|
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h 147 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHK--------------SDVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGH 147 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCC
T ss_pred eCCCEEEEEECCCCCeeEEEccCC--------------CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEecc
Confidence 468999999999999999999999 9999999999 899999999999999999974 445555 79
Q ss_pred CCCEEEEEEecCC------cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 84 GSPVESVLCLPSG------GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 84 ~~~v~~~~~~~~~------~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
...+.++++.|.. ..+++++ |+.|++||++ ..+....+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN-QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETT-TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC-cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999854 4777777 8999999998 788888899999999999999999999999999999999998
Q ss_pred -cceEeeee--------------------cceeEEEEEccCCCEEEEEEe--------cccCcEEEEEEccCCCeEEEEc
Q psy11036 157 -LKTVSSFT--------------------GGLDVCIWDMLGGGKLLHKFT--------CHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 157 -~~~~~~~~--------------------~~~~i~~~d~~~~~~~~~~~~--------~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.+.+..+. ....+++|++.. ...+..+. .|...+.+++|+|+|++|++|+
T Consensus 227 ~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 227 AKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDP-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp TTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETT-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCc-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 55554442 123378888765 34444443 3456799999999999999999
Q ss_pred CCceEEEEEccCC
Q psy11036 208 LDHHAKIYEMVNF 220 (239)
Q Consensus 208 ~d~~i~iwd~~~~ 220 (239)
.||.|++||+.++
T Consensus 306 ~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 306 TDNVIRVWQVMTA 318 (319)
T ss_dssp TTSCEEEEEEEEC
T ss_pred cCceEEEEEEeec
Confidence 9999999999764
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=229.67 Aligned_cols=202 Identities=23% Similarity=0.305 Sum_probs=167.9
Q ss_pred CCCCEEEEeeCCCcceee---eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--cee
Q psy11036 5 LPILIVALWDIPSEAQVS---TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~~ 79 (239)
+.|+.|+|||+++++... ...+|. ..|.+++|+| ++++|++|+.|+++++|++.++. .+.
T Consensus 35 ~~D~~i~iw~~~~~~~~~~~~~~~~h~--------------~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 35 GGDRRIRIWGTEGDSWICKSVLSEGHQ--------------RTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVT 99 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECSSCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEE
T ss_pred cCCCeEEEEEcCCCcceeeeeeccccC--------------CcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEE
Confidence 468999999998775432 235787 9999999999 89999999999999999998764 345
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC--eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG--KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
.+ .|...|.+++|+|++++|++++ |+.|++||++... ..+..+..|...|.+++|+|++++|++++.|+.|++||.
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 55 6999999999999999999998 8999999997332 346678899999999999999999999999999999998
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC---------------
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF--------------- 220 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~--------------- 220 (239)
+.. ...+...+.+|...|.+++|+|++++|++++.|++|++||....
T Consensus 180 ~~~------------------~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 180 EED------------------DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp ETT------------------EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred cCC------------------CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 711 12345667899999999999999999999999999999997432
Q ss_pred eeeEEec--CCCCeeeeEecC
Q psy11036 221 SPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 221 ~~~~~~~--~~~~v~~~~~sp 239 (239)
+++..+. +...|.+++|+|
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~ 262 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQ 262 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECT
T ss_pred ceeEEecCCCCCcEEEEEEec
Confidence 2334443 677899999986
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.1e-34 Score=219.64 Aligned_cols=216 Identities=19% Similarity=0.324 Sum_probs=186.1
Q ss_pred CCCEEEEeeCCCcceee---eee--CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC--ce
Q psy11036 6 PILIVALWDIPSEAQVS---TFT--NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD--PV 78 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~--~~ 78 (239)
.||.|++||+.+++... .+. .|. ..|.+++|+| ++++|++++.|+.|++||+.+++ ..
T Consensus 70 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~ 134 (337)
T 1gxr_A 70 GKGCVKVWDISHPGNKSPVSQLDCLNRD--------------NYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIK 134 (337)
T ss_dssp CBSEEEEEETTSTTCCSCSEEEECSCTT--------------SBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEE
T ss_pred CCCeEEEEECCCCCceeeeecccccCCC--------------CcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCccee
Confidence 38999999998765433 333 566 8999999999 89999999999999999999887 33
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..+ .|...+.+++|+|+++++++++ ++.|++||++ .++.+..+..|...+.+++|+|++++|++++.|+.|++||++
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 344 5888999999999999999888 7999999998 788889999999999999999999999999999999999998
Q ss_pred -cceEeee---------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 157 -LKTVSSF---------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 157 -~~~~~~~---------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
.+.+..+ ..++.+.+||+.+.. ...+..|...|.+++|+|++++|++++.||.|++
T Consensus 214 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 291 (337)
T 1gxr_A 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291 (337)
T ss_dssp TTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEE
Confidence 4444333 224569999998744 3467789999999999999999999999999999
Q ss_pred EEccCCeeeEEecCCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
||+.+++.+....+...+.+++|+|
T Consensus 292 ~~~~~~~~~~~~~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 292 WRTPYGASIFQSKESSSVLSCDISV 316 (337)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECT
T ss_pred EECCCCeEEEEecCCCcEEEEEECC
Confidence 9999999998888999999999987
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-35 Score=223.58 Aligned_cols=204 Identities=18% Similarity=0.212 Sum_probs=167.2
Q ss_pred CCCCEEEEeeCCC--cceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCC--cee
Q psy11036 5 LPILIVALWDIPS--EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPD--PVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~--~~~ 79 (239)
+.|+.|+|||+.+ .+.+.++.+|. ++|.+++|++. ++++|++|+.|++|++||+++++ ...
T Consensus 28 s~D~~v~iw~~~~~~~~~~~~l~gH~--------------~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 28 SSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp ETTSCEEEEEBCSSCBCCCEEECCCS--------------SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCE
T ss_pred eCCCEEEEEecCCCCcEEEEEEcccc--------------CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEE
Confidence 4689999999974 46788999999 99999999862 37899999999999999998874 344
Q ss_pred ee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCCe-EEEEEeccCCceEEEEEcCC-------------CCEE
Q psy11036 80 SV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLASG-------------GKRL 141 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~i~~i~~~~~-------------~~~l 141 (239)
.+ .|...|.+++|+|+ +.++++++ |+.|++||++.... ....+.+|...|.+++|+|+ +++|
T Consensus 94 ~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 94 VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 44 58899999999997 78898888 89999999984322 24567889999999999997 5799
Q ss_pred EEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC---CeEEEEcCCceEEEEEc
Q psy11036 142 ISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG---KRLISASLDHHAKIYEM 217 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~d~~i~iwd~ 217 (239)
++|+.|+.|++||++ .+. .......+.+|...|.+++|+|++ ++|++++.|++|++||+
T Consensus 174 ~sgs~D~~v~lwd~~~~~~-----------------~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQ-----------------TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp EEEETTSCEEEEEEETTTT-----------------EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EEEcCCCcEEEEEEcCCCc-----------------eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 999999999999987 110 012456678999999999999984 89999999999999999
Q ss_pred cCCe---eeEEe---cCCCCeeeeEecC
Q psy11036 218 VNFS---PVHTL---DYPSPVLSIDVSM 239 (239)
Q Consensus 218 ~~~~---~~~~~---~~~~~v~~~~~sp 239 (239)
.+.. ....+ .+...|.+++|+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 264 (297)
T 2pm7_B 237 DNEQGPWKKTLLKEEKFPDVLWRASWSL 264 (297)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECS
T ss_pred CCCCCccceeeeecccCCCcEEEEEECC
Confidence 7743 12222 3678899999987
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8e-35 Score=225.98 Aligned_cols=195 Identities=24% Similarity=0.436 Sum_probs=170.1
Q ss_pred CCCCEEEEeeCCCc------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 5 LPILIVALWDIPSE------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
+.|+.+++|++... .....+..|. ..|.+++|+| ++..|++++.|++|++||+++++.+
T Consensus 125 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENMAAKKKSVAMHT--------------NYLSACSFTN-SDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp STTSEEEEEECCCCTTCCSGGGCEEEEECS--------------SCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE
T ss_pred eCCCCEEEEEEeccccccccccceeeeccC--------------CcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 46899999998643 3345667787 9999999999 7889999999999999999999998
Q ss_pred eee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 79 MSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
..+ .|...|.+++++| ++..+++++ |+.|++||++ .++.+..+..|...|.+++|+|++.+|++++.|++|++||
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR-SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC-CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 888 6899999999988 467898888 8999999999 7888899999999999999999999999999999999999
Q ss_pred cc-cceEeee------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC
Q psy11036 155 MT-LKTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 155 ~~-~~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 209 (239)
++ .+.+..+ ..++.+++||+.+ ++.+..+.+|...|.+++|+|++++|++|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 269 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 97 3332221 2245699999976 56677889999999999999999999999999
Q ss_pred ceEEEEE
Q psy11036 210 HHAKIYE 216 (239)
Q Consensus 210 ~~i~iwd 216 (239)
+.|++|+
T Consensus 348 ~~v~vW~ 354 (354)
T 2pbi_B 348 HTLRVWA 354 (354)
T ss_dssp SEEEEEC
T ss_pred CCEEecC
Confidence 9999995
No 25
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-34 Score=228.68 Aligned_cols=221 Identities=17% Similarity=0.219 Sum_probs=183.1
Q ss_pred CCCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----
Q psy11036 4 DLPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP---- 75 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~---- 75 (239)
.+.+|.|+||++.+. +....+.+|. +.|++++|+|.++++|++|+.||+|++||+.++
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~--------------~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHT--------------APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCS--------------SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCC--------------CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 467899999998654 2345677888 999999999966889999999999999999987
Q ss_pred ---Cceeee-cCCCCEEEEEEecCC-cEEEEeC-CCcEEEEEccCCCeEEEEE--eccCCceEEEEEcCCCCEEEEEecC
Q psy11036 76 ---DPVMSV-NHGSPVESVLCLPSG-GIFVTGG-GLDVCIWDMLGGGKLLHKF--TCHHKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 76 ---~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~-~~~i~~~d~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~d 147 (239)
+++..+ .|...|.+++|+|++ .++++++ |+.|++||++ .++.+..+ ..|...|.+++|+|++++|++++.|
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT-TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 455556 699999999999998 5888877 8999999999 78888888 7899999999999999999999999
Q ss_pred CeEEEEEcc-cceEeee----------------------e-----cceeEEEEEccCCCEEEEEEe-cccCcEEEEEEcc
Q psy11036 148 HHAKIYEMT-LKTVSSF----------------------T-----GGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLAS 198 (239)
Q Consensus 148 ~~i~i~d~~-~~~~~~~----------------------~-----~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~ 198 (239)
+.|++||++ ++.+..+ + .++.+.+||+++...++.... .|...+.+++|+|
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEET
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcC
Confidence 999999998 4443332 2 245699999987655444333 5778899999999
Q ss_pred CCCeEE-EEcCCceEEEEEccCCee-e---EEecCCCCeeeeEecC
Q psy11036 199 GGKRLI-SASLDHHAKIYEMVNFSP-V---HTLDYPSPVLSIDVSM 239 (239)
Q Consensus 199 ~~~~l~-s~s~d~~i~iwd~~~~~~-~---~~~~~~~~v~~~~~sp 239 (239)
++++|+ +++.||.|++||+.++++ + ..+.+..++.+++|+|
T Consensus 278 ~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp 323 (402)
T 2aq5_A 278 DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP 323 (402)
T ss_dssp TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC
T ss_pred CCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec
Confidence 999986 566799999999998874 3 3344678999999987
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-34 Score=237.80 Aligned_cols=213 Identities=25% Similarity=0.412 Sum_probs=187.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++||+. ++.+..+..|. ..|.+++|+| ++++|++++.|+.+++||. +++.+..+ .|
T Consensus 322 ~~d~~i~~w~~~-~~~~~~~~~~~--------------~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~ 384 (577)
T 2ymu_A 322 SDDKTVKLWNRN-GQHLQTLTGHS--------------SSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH 384 (577)
T ss_dssp ETTSCEEEEETT-SCEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECC
T ss_pred eCCCeEEEEeCC-CCeeEEEeCCC--------------CCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCC
Confidence 468999999975 45567788888 8999999999 8999999999999999995 46666666 68
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
...|.+++|+|+++++++++ |+.|++||. .++.+..+.+|...|++++|+|++++|++++.|+.|++||..++.+..
T Consensus 385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~--~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~ 462 (577)
T 2ymu_A 385 SSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQT 462 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT--TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeC--CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEE
Confidence 99999999999999999988 799999996 577888999999999999999999999999999999999987555444
Q ss_pred e----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 163 F----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 163 ~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
+ ..++.|++||. .++++..+.+|...|++++|+|++++|++++.||.|++||. ++
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~--~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~ 539 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 539 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEET--TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TS
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC--CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CC
Confidence 3 23456999995 36788889999999999999999999999999999999996 67
Q ss_pred eeeEEec-CCCCeeeeEecC
Q psy11036 221 SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 221 ~~~~~~~-~~~~v~~~~~sp 239 (239)
+++..+. |.++|++++|+|
T Consensus 540 ~~~~~~~~h~~~v~~~~fs~ 559 (577)
T 2ymu_A 540 QLLQTLTGHSSSVWGVAFSP 559 (577)
T ss_dssp CEEEEEECCSSCEEEEEECT
T ss_pred CEEEEEcCCCCCEEEEEEcC
Confidence 8888887 889999999997
No 27
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-34 Score=245.97 Aligned_cols=218 Identities=20% Similarity=0.295 Sum_probs=195.8
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~ 84 (239)
.+|.|+|||+.+++.+..+..|. .+|++++|+| ++++|++++.||.|++||+.+++.+..+ .|.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~--------------~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 97 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTE--------------TPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCEEEEEECCCCceEEEEecCC--------------CcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCC
Confidence 48999999999999999999998 9999999999 8999999999999999999999988888 599
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
..|.+++|+|+++++++++ |+.|++||++........+..|...|.+++|+| ++..+++++.|+.|++||++ .....
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 9999999999999999888 799999999855578888899999999999999 88999999999999999986 22211
Q ss_pred ee-------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 162 SF-------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 162 ~~-------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.+ ..++.+.+||..+ .+.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd 256 (814)
T 3mkq_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256 (814)
T ss_dssp EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 11 2345699999976 677888899999999999999999999999999999999
Q ss_pred ccCCeeeEEec-CCCCeeeeEecC
Q psy11036 217 MVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.+++.+..+. +...+.+++|+|
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 257 SSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp TTTCSEEEEECCSSSSEEEEEECT
T ss_pred CCCCcEEEEeecCCCcEEEEEEcc
Confidence 99999999988 667999999987
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.8e-34 Score=219.25 Aligned_cols=214 Identities=19% Similarity=0.288 Sum_probs=180.2
Q ss_pred EEEeeC--CCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-----eeee-
Q psy11036 10 VALWDI--PSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-----VMSV- 81 (239)
Q Consensus 10 i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-----~~~~- 81 (239)
++++.. ++.++..+|++|. +.|++++|+|+++++|+||+.|++|++||+.+.+. ...+
T Consensus 18 ~~~~~~~~~~~~l~~tL~GH~--------------~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~ 83 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLKGHN--------------GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 83 (340)
T ss_dssp --------CEEEEEEEECCCS--------------SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC
T ss_pred EEEEEccCCceEEEEEECCcc--------------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe
Confidence 444443 3345567899999 99999999996678999999999999999986643 3344
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
.|...|.+++|+|+++++++++ |+.|++|+.. ..........+...+..+.+++++..|++++.|+.+++||+.....
T Consensus 84 ~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 84 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCCCEEEEEECCCCCEEEEEcccccceEEeec-ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce
Confidence 5899999999999999999998 8999999998 7777777888889999999999999999999999999999862211
Q ss_pred eee--------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 161 SSF--------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 161 ~~~--------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
... ..+..+++||+++ .+....+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~i 241 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 241 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 111 1234599999987 6788889999999999999999999999999999999
Q ss_pred EEccCCeeeEEecCCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
||+.+++++..+.+...+.+++|+|
T Consensus 242 wd~~~~~~~~~~~~~~~v~~~~~~~ 266 (340)
T 4aow_A 242 WDLNEGKHLYTLDGGDIINALCFSP 266 (340)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECS
T ss_pred EEeccCceeeeecCCceEEeeecCC
Confidence 9999999999999889999999986
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.3e-36 Score=234.30 Aligned_cols=216 Identities=18% Similarity=0.270 Sum_probs=184.8
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCE
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPV 87 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v 87 (239)
.+..|+..+..+.+++.+|. +.|++++|+| ++++|++|+.|++|++||+.+++....+ .|...|
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~--------------~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v 111 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHS--------------GKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWV 111 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCS--------------SCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTC
T ss_pred cccccccceeEEeecccccc--------------cEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCE
Confidence 34567777788888999999 9999999999 8999999999999999999999888877 688999
Q ss_pred EEEEEecCCcEEEEeC-CCcEEEEEccCC------CeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc-cc
Q psy11036 88 ESVLCLPSGGIFVTGG-GLDVCIWDMLGG------GKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 88 ~~~~~~~~~~~l~~~~-~~~i~~~d~~~~------~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~-~~ 158 (239)
.+++|+|+++++++++ |+.+++||+... ......+.+|.+.+.++.|.|++ ..|++++.|++|++||++ ++
T Consensus 112 ~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 112 MECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp CCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 9999999999999999 899999998631 12345577899999999999964 579999999999999997 44
Q ss_pred eEeee----------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 159 TVSSF----------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 159 ~~~~~----------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
.+..+ ..++.+++||++...+.+..+.+|...|.+++|+|++++|++|+.||
T Consensus 192 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 192 RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSS
T ss_pred EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCC
Confidence 43322 12445999999877788889999999999999999999999999999
Q ss_pred eEEEEEccCCeeeEEecCC--------CCeeeeEecC
Q psy11036 211 HAKIYEMVNFSPVHTLDYP--------SPVLSIDVSM 239 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~--------~~v~~~~~sp 239 (239)
+|++||+++++.+..+... ..|.+++|+|
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI 308 (380)
T ss_dssp CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS
T ss_pred eEEEEECCCCcEEEEecccccccccccCceEEEEECC
Confidence 9999999999998887622 2488999987
No 30
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-34 Score=224.69 Aligned_cols=224 Identities=13% Similarity=0.192 Sum_probs=187.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC---CCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS---SDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
.++.|++||+.+++.+..+..+. ...+...|++++|+|+. +.+|++|+.||.|++||+.+++.+..+
T Consensus 42 ~~~~v~vw~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 42 GSNRVTLYECHSQGEIRLLQSYV---------DADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp ETTEEEEEEECGGGCEEEEEEEE---------CSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCcEEEeeeecc---------ccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 36799999999888877776543 11122789999999932 569999999999999999999988888
Q ss_pred cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEE---eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 82 NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKF---TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 ~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.|...|.+++|+| ++.++++++ |+.|++||++ .++.+..+ ..|...|.+++|+|++++|++++.|+.|++||++
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ-TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT-TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee-cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 5999999999999 899999988 8999999998 77888887 6899999999999999999999999999999987
Q ss_pred -cce------------------------------------------------EeeeecceeEEEEEccCCC---------
Q psy11036 157 -LKT------------------------------------------------VSSFTGGLDVCIWDMLGGG--------- 178 (239)
Q Consensus 157 -~~~------------------------------------------------~~~~~~~~~i~~~d~~~~~--------- 178 (239)
.+. +.....++.+++||+.+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 271 (366)
T 3k26_A 192 SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPS 271 (366)
T ss_dssp SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTT
T ss_pred CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccC
Confidence 221 1112345669999987643
Q ss_pred ----EEEEEEecccCcEEEEEEccC--CCeEEEEcCCceEEEEEccCCeee----EEec-C--CCCeeeeEecC
Q psy11036 179 ----KLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMVNFSPV----HTLD-Y--PSPVLSIDVSM 239 (239)
Q Consensus 179 ----~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~----~~~~-~--~~~v~~~~~sp 239 (239)
..+..+..|...|.+++|+|+ +++|++++.||.|++||+.++++. ..+. + ..+|++++|+|
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 272 ESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp CCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred CcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC
Confidence 457788899999999999999 999999999999999999987643 3555 3 68999999987
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=224.16 Aligned_cols=207 Identities=20% Similarity=0.258 Sum_probs=164.8
Q ss_pred CCCCEEEEeeCCCc--ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---e
Q psy11036 5 LPILIVALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV---M 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~---~ 79 (239)
+.|+.|++||+.++ +.+..+.+|. ..|.+++|+| ++++|++|+.|++|++||+.++... .
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~--------------~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 144 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHE--------------NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVS 144 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCC--------------CCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEE
Confidence 45899999998766 4577889998 9999999999 8999999999999999999876543 3
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
.+ .|...|.+++|+|++.+|++++ |+.|++||.+ ..+ ....+.+|...|.+++|+|++++|++++.|++|++|+.
T Consensus 145 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 34 5889999999999999999998 8999999998 443 45678899999999999999999999999999999996
Q ss_pred c--c--------------ceE-----------------------eeeecceeEEEEEccCCC---E-----EEEEEeccc
Q psy11036 156 T--L--------------KTV-----------------------SSFTGGLDVCIWDMLGGG---K-----LLHKFTCHH 188 (239)
Q Consensus 156 ~--~--------------~~~-----------------------~~~~~~~~i~~~d~~~~~---~-----~~~~~~~h~ 188 (239)
. . +++ ....++..+++|+..... . ......+|.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~ 303 (345)
T 3fm0_A 224 YLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS 303 (345)
T ss_dssp ECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSS
T ss_pred ccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccccc
Confidence 3 1 111 111345669999976532 1 122235799
Q ss_pred CcEEEEEEccCC-CeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 189 KTVTSLCLASGG-KRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 189 ~~v~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
..|.+++|+|++ .+|++|+.||.|++|++.+++.+...+
T Consensus 304 ~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 304 QDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEEECC--------
T ss_pred CcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 999999999987 599999999999999999888765543
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-34 Score=229.40 Aligned_cols=217 Identities=15% Similarity=0.195 Sum_probs=184.2
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++||+.+++....+..+ ..+....|+| ++++|++|+.||.|++||+.+++....+ .|
T Consensus 75 ~~d~~v~i~d~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 138 (420)
T 3vl1_A 75 RLDGHDFLFNTIIRDGSKMLKRA---------------DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAH 138 (420)
T ss_dssp EETTEEEEEECCSEETTTTSCSC---------------CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSS
T ss_pred EcCCcEEEEEecccceeeEEecC---------------CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccc
Confidence 34799999999888776666655 3455557788 8999999999999999999988887776 79
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEe
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVS 161 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~ 161 (239)
...|.+++|+|+++++++++ |+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|+.|++||++ ++.+.
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVK-DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCC-CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 99999999999999999998 7999999998 777888899999999999999999999999999999999998 54444
Q ss_pred eee----------------------------------------------cceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 162 SFT----------------------------------------------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 162 ~~~----------------------------------------------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
.+. .++.+++||+++..........|...|.+++
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLT 297 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEE
Confidence 332 2345999999986666655567889999999
Q ss_pred EccCCC-eEEEEcCCceEEEEEccCCee-eEEec--CCCCeeeeEec
Q psy11036 196 LASGGK-RLISASLDHHAKIYEMVNFSP-VHTLD--YPSPVLSIDVS 238 (239)
Q Consensus 196 ~s~~~~-~l~s~s~d~~i~iwd~~~~~~-~~~~~--~~~~v~~~~~s 238 (239)
|+|+++ +|++++.||.|++||+++++. +..+. +..++.++.|+
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 344 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA 344 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC
Confidence 999998 999999999999999998754 66665 66788888765
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.5e-35 Score=243.75 Aligned_cols=200 Identities=18% Similarity=0.283 Sum_probs=176.9
Q ss_pred CCCCCEEEEeeCCCc-----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 4 DLPILIVALWDIPSE-----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
.+.|+.|++||+.+. .....+.+|. ..|.+++|+| ++++|++|+.|++|++||+.+++..
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--------------~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHS--------------HFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCC--------------CcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcce
Confidence 367899999998763 3456788898 9999999999 8999999999999999999999888
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEE---eccCCceEEEEEcCCC--CEEEEEecCCeEE
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKF---TCHHKTVTSLCLASGG--KRLISASLDHHAK 151 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~---~~~~~~i~~i~~~~~~--~~l~~~~~d~~i~ 151 (239)
..+ .|...|.+++|+|+++.+++++ |+.|++||+. ........ .+|...|.+++|+|++ ..+++++.|+.|+
T Consensus 466 ~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 466 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC-CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 877 7999999999999999999998 8999999986 33322222 3688899999999987 5799999999999
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 231 (239)
+||++ ..+....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.....
T Consensus 545 vwd~~--------------------~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~ 604 (694)
T 3dm0_A 545 VWNLS--------------------NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 604 (694)
T ss_dssp EEETT--------------------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred EEECC--------------------CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence 99998 4566677789999999999999999999999999999999999999999998889
Q ss_pred eeeeEecC
Q psy11036 232 VLSIDVSM 239 (239)
Q Consensus 232 v~~~~~sp 239 (239)
+.+++|+|
T Consensus 605 v~~~~~sp 612 (694)
T 3dm0_A 605 IHALCFSP 612 (694)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99999987
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-34 Score=223.99 Aligned_cols=217 Identities=22% Similarity=0.340 Sum_probs=167.2
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccc----eeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVP----LMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.++.+++|++.+++.+..+..+......+ ..........|++++|+| ++++|++|+.|++|++||+.+++.+..+
T Consensus 83 ~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~ 161 (393)
T 1erj_A 83 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMIL 161 (393)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 46899999999999888887654110000 000011123599999999 8999999999999999999999888877
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-c
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
.|...|.+++|+|++..+++++ |+.|++||++ .++....+. +...+.+++|+| ++++|++++.|+.|++||++ +
T Consensus 162 ~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~ 239 (393)
T 1erj_A 162 QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR-TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG 239 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC
T ss_pred ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC-CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 6999999999999999999988 8999999998 677776665 667899999999 89999999999999999998 3
Q ss_pred ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe------------eeEE
Q psy11036 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS------------PVHT 225 (239)
Q Consensus 158 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~------------~~~~ 225 (239)
..+..+ ........+|...|.+++|+|++++|++++.|+.|++||+.+.. +...
T Consensus 240 ~~~~~~--------------~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T 1erj_A 240 FLVERL--------------DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 305 (393)
T ss_dssp CEEEEE--------------C------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEE
T ss_pred cEEEee--------------cccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEE
Confidence 333333 11112235799999999999999999999999999999997632 3344
Q ss_pred ec-CCCCeeeeEecC
Q psy11036 226 LD-YPSPVLSIDVSM 239 (239)
Q Consensus 226 ~~-~~~~v~~~~~sp 239 (239)
+. |...|.+++|+|
T Consensus 306 ~~~h~~~v~~~~~~~ 320 (393)
T 1erj_A 306 YIGHKDFVLSVATTQ 320 (393)
T ss_dssp EECCSSCEEEEEECG
T ss_pred EecccCcEEEEEECC
Confidence 44 778899999975
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-36 Score=235.54 Aligned_cols=215 Identities=16% Similarity=0.193 Sum_probs=168.1
Q ss_pred CCCCEEEEeeCCCc--ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC---cee
Q psy11036 5 LPILIVALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD---PVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---~~~ 79 (239)
+.||.|++||+.++ +.+..+.+|. ..|.+++|+| ++++|++++.|++|++||+.+++ ...
T Consensus 30 ~~d~~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 30 TATNQVELYEQDGNGWKHARTFSDHD--------------KIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp CSSSCBCEEEEETTEEEECCCBCCCS--------------SCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEE
T ss_pred cCCCEEEEEEccCCceEEEEEEecCC--------------ceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 46899999999988 7788899998 9999999999 78999999999999999999877 444
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe---EEEEEec-cCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK---LLHKFTC-HHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~---~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
.+ .|...|.+++|+|+++++++++ |+.|++||++ ..+ ....+.. |...|.+++|+|++++|++++.|+.|++|
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE-QENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVL 173 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEE
T ss_pred EecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC-CcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 44 6899999999999999999988 7999999998 444 4667777 99999999999999999999999999999
Q ss_pred EcccceEeeeecceeEEEEEcc-CCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee----eEEec-
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDML-GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP----VHTLD- 227 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~----~~~~~- 227 (239)
|++...+.... ....|..+ ...+++..+ +|...|.+++|+|++++|++++.||.|++||+.+++. +..+.
T Consensus 174 d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 174 SAYVRDVDAKP---EASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp EECCSSCC-CC---CSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC
T ss_pred EEEecccCCCc---cccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC
Confidence 98611100000 00000000 013445555 8999999999999999999999999999999999887 66666
Q ss_pred CCCCeeeeEecC
Q psy11036 228 YPSPVLSIDVSM 239 (239)
Q Consensus 228 ~~~~v~~~~~sp 239 (239)
+..+|.+++|+|
T Consensus 250 ~~~~v~~~~~s~ 261 (377)
T 3dwl_C 250 SQLPLRSLLWAN 261 (377)
T ss_dssp SSSCEEEEEEEE
T ss_pred CCCceEEEEEcC
Confidence 778999999986
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-34 Score=223.22 Aligned_cols=200 Identities=19% Similarity=0.289 Sum_probs=165.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.|+.|++||+++++.+..+.+|. ..|.+++|+| ++++|++++.|++|++||+.........
T Consensus 95 s~D~~v~lwd~~~~~~~~~~~~h~--------------~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRFVGHQ--------------SEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEEECCC--------------SCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred cCCCcEEEEECCCCcEEEEEcCCC--------------CcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 468999999999999999999999 9999999999 8999999999999999999743322222
Q ss_pred cCCCCEEEEEEecCC----------cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 82 NHGSPVESVLCLPSG----------GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~----------~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
.|...|.+++|+|++ .++++++ |+.|++||. ..+....+.+|...|.+++|+|+|++|++++.|+.|
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT--NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET--TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC--CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 478889999999986 6788887 899999995 567788889999999999999999999999999999
Q ss_pred EEEEcc--cceEeee--------------------ecceeEEEEEccCCCE-EEEEEe-----------cccCcEEEEEE
Q psy11036 151 KIYEMT--LKTVSSF--------------------TGGLDVCIWDMLGGGK-LLHKFT-----------CHHKTVTSLCL 196 (239)
Q Consensus 151 ~i~d~~--~~~~~~~--------------------~~~~~i~~~d~~~~~~-~~~~~~-----------~h~~~v~~~~~ 196 (239)
++||+. ......+ ..+..+++||+.+... .+..+. +|...|.+++|
T Consensus 238 ~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 317 (343)
T 2xzm_R 238 LIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAW 317 (343)
T ss_dssp EEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEE
T ss_pred EEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEE
Confidence 999994 2211111 1234599999876432 122332 67888999999
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
+|+|++|++|+.||.|++|++++++
T Consensus 318 sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 318 NALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CCCCCeEEEecCCceEEEEEEEccC
Confidence 9999999999999999999987654
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-34 Score=228.77 Aligned_cols=218 Identities=15% Similarity=0.212 Sum_probs=180.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++||+++++....+..|. +.|++++|+| ++++|++++.|+.|++||+.+++.+..+ .|
T Consensus 116 ~~dg~i~iwd~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 116 TTEGDIKVLDSNFNLQREIDQAHV--------------SEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp ETTSCEEEECTTSCEEEEETTSSS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred ECCCCEEEEeCCCcceeeeccccc--------------CccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 468999999999999888888998 9999999999 7899999999999999999999888888 69
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec---cCCceEE---------------------EEEcCCC
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC---HHKTVTS---------------------LCLASGG 138 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~---~~~~i~~---------------------i~~~~~~ 138 (239)
...|.+++|+|+++++++++ |+.|++||++ .++.+..+.. +...+.+ ++|+|++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECG-TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECC-CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 99999999999999999988 8999999998 7888888874 3334444 4557899
Q ss_pred CEEEEEecCCeEEEEEcc-cceEeee------------------------ecceeEEEEEccCCCEEEEEEec-ccCcEE
Q psy11036 139 KRLISASLDHHAKIYEMT-LKTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTC-HHKTVT 192 (239)
Q Consensus 139 ~~l~~~~~d~~i~i~d~~-~~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~ 192 (239)
++|++++.||.|++||++ .+.+..+ ..++.+++||+++...++..+.. |...|.
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 339 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN 339 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence 999999999999999997 4433322 23456999999987666777776 667788
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEccCC----------eeeEEecCCCCeeeeEecC
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMVNF----------SPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~~~----------~~~~~~~~~~~v~~~~~sp 239 (239)
++.+ +++++|++++.|+.|++|++... .+.....+...|.+++|+|
T Consensus 340 ~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 395 (420)
T 3vl1_A 340 NVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVS 395 (420)
T ss_dssp EEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEEC
T ss_pred EEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEcc
Confidence 7754 67889999999999999999763 2222333777899999987
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=215.96 Aligned_cols=200 Identities=17% Similarity=0.251 Sum_probs=171.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeC--CceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTN--HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
|.|++|+|||+++++.++.+.. |. ..|++++|+| ++++|++|+.||+|++||+++++.+..+
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~--------------~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPG--------------EYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTT--------------CCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCC--------------CeEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 4589999999999998887764 55 7899999999 8999999999999999999999988887
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
.|...+.++.+ ++..+++++ ++.+.+|+.......+..+.+|...+..+.++++++++++++.|+.|++||++ ++.
T Consensus 107 ~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 107 SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred CccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 67887776655 467888888 79999999986777888899999999999999999999999999999999986 221
Q ss_pred Ee--------------ee--------------------------------------------------------e--cce
Q psy11036 160 VS--------------SF--------------------------------------------------------T--GGL 167 (239)
Q Consensus 160 ~~--------------~~--------------------------------------------------------~--~~~ 167 (239)
.. .+ + .++
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCC
Confidence 00 00 1 235
Q ss_pred eEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 168 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 168 ~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
.|++||+++ ++++..+.+|.+.|++++|+|++++|+|||.||+|+|||+....|
T Consensus 265 ~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 265 QLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp CEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred EEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 599999886 678889999999999999999999999999999999999977653
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-33 Score=214.27 Aligned_cols=186 Identities=22% Similarity=0.334 Sum_probs=169.2
Q ss_pred cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCC
Q psy11036 18 EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSG 96 (239)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~ 96 (239)
.....++.+|. +.|++++|+| ++++|++++.||.|++|++.+++....+ .|...|.+++|+|++
T Consensus 13 ~~~~~~~~gh~--------------~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~ 77 (312)
T 4ery_A 13 YALKFTLAGHT--------------KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 77 (312)
T ss_dssp CEEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred ceeEEEEcccC--------------CcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC
Confidence 34556777887 9999999999 8999999999999999999999888877 689999999999999
Q ss_pred cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEcc
Q psy11036 97 GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~ 175 (239)
+++++++ |+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 78 ~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~------------------- 137 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK------------------- 137 (312)
T ss_dssp SEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-------------------
T ss_pred CEEEEECCCCEEEEEECC-CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-------------------
Confidence 9999998 8999999998 788889999999999999999999999999999999999988
Q ss_pred CCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
..+.+..+..|..+|.+++|+|++++|++++.||.|++||+++++.+..+. +..++..++|+|
T Consensus 138 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 138 -TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp -TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred -CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 456666778899999999999999999999999999999999999888775 556899999987
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-33 Score=219.24 Aligned_cols=216 Identities=18% Similarity=0.204 Sum_probs=186.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeC-CceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTN-HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
+.||.|++||+.+++....+.. |. ..|++++|+| ++++|++|+.||.|++||+.+++.+..+ .
T Consensus 110 ~~d~~v~lw~~~~~~~~~~~~~~~~--------------~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 110 ALERNVYVWNADSGSVSALAETDES--------------TYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp EETTEEEEEETTTCCEEEEEECCTT--------------CCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred ECCCeEEEeeCCCCcEeEeeecCCC--------------CCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence 4689999999999998887776 66 8999999999 8999999999999999999999988888 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
|...|.+++|+ +..+++++ |+.|++||++........+..|...|.+++|+|++++|++++.|+.|++||++ .+.+
T Consensus 175 ~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 175 HQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred CCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 99999999995 56888887 89999999986677888899999999999999999999999999999999998 4444
Q ss_pred eee---------------------e----cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEE--EcCCceEE
Q psy11036 161 SSF---------------------T----GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS--ASLDHHAK 213 (239)
Q Consensus 161 ~~~---------------------~----~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~d~~i~ 213 (239)
..+ + .++.+++||+.+ ++++..+. +...|.+++|+|++++|++ |+.||.|+
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 433 1 156799999987 55666665 5678999999999999998 45899999
Q ss_pred EEEccCCeeeEE--ec-CCCCeeeeEecC
Q psy11036 214 IYEMVNFSPVHT--LD-YPSPVLSIDVSM 239 (239)
Q Consensus 214 iwd~~~~~~~~~--~~-~~~~v~~~~~sp 239 (239)
+||+.+++.... +. +...|.+++|+|
T Consensus 331 v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 331 IWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp EEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred EEecCCccceeEEEecCCCCCEEEEEECC
Confidence 999999766554 33 788999999987
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-34 Score=218.88 Aligned_cols=206 Identities=17% Similarity=0.155 Sum_probs=159.6
Q ss_pred CCCCEEEEeeCCC-------cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC--
Q psy11036 5 LPILIVALWDIPS-------EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-- 75 (239)
Q Consensus 5 ~~dg~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-- 75 (239)
+.|+.|+|||++. .+.+..+.+|. +.|.+++|+| ++++|++|+.|++|++||++..
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~--------------~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~ 141 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHE--------------NEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGE 141 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC------------------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCC
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCC--------------CcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCC
Confidence 4689999999853 34567788898 9999999999 8999999999999999999532
Q ss_pred --Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC--eEEEEEeccCCceEEEEEcCC--CCEEEEEecC
Q psy11036 76 --DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG--KLLHKFTCHHKTVTSLCLASG--GKRLISASLD 147 (239)
Q Consensus 76 --~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d 147 (239)
+++..+ .|...|.+++|+|++.+|++++ |+.|++||.+ .. +.+..+.+|...|.+++|+|+ +..|++++.|
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY-DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC-CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 234455 6899999999999999999998 8999999987 44 577889999999999999998 6789999999
Q ss_pred CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec-ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe--eeE
Q psy11036 148 HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS--PVH 224 (239)
Q Consensus 148 ~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~--~~~ 224 (239)
++|++||++..... +. ........+.. |...|.+++|++++ +|++++.||.|++||..+++ .+.
T Consensus 221 ~~v~iw~~~~~~~~---~~---------~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 221 STVRVWKYMGDDED---DQ---------QEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp SCEEEEEEEEECTT---SC---------EEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CeEEEEEecCCCcc---cc---------ceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEe
Confidence 99999998711000 00 00122333444 88999999999765 89999999999999998874 343
Q ss_pred Ee-c-CCC-CeeeeEecC
Q psy11036 225 TL-D-YPS-PVLSIDVSM 239 (239)
Q Consensus 225 ~~-~-~~~-~v~~~~~sp 239 (239)
.. . |.. .|++++|+|
T Consensus 288 ~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 288 KRALCHGVYEINVVKWLE 305 (330)
T ss_dssp EESCTTTTSCEEEEEEC-
T ss_pred ccccccccceEEEEEEec
Confidence 33 2 665 899999986
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-34 Score=224.99 Aligned_cols=181 Identities=18% Similarity=0.267 Sum_probs=157.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.||.|++||+++++.+..+.+|. ..|++++|+|++..++++++.|++|++||++++++...+
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~~h~--------------~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYNAHS--------------SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred eCCCeEEEEECCCCcEEEEEcCCC--------------CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 468999999999999999999999 999999999955568999999999999999998877655
Q ss_pred cCCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcccc
Q psy11036 82 NHGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 82 ~~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~~~ 158 (239)
.+...+.+++|+|+ +.++++++ |+.|++||++ .++.+..+..|...|++++|+|++ ++|++++.|++|+|||++
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~-- 300 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK-NPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD-- 300 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS-CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT--
T ss_pred cccccccchhhhhcccceEEEeecccceeEEECC-CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC--
Confidence 36778999999997 45777776 7999999998 778888999999999999999987 579999999999999988
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCCe
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
.++++. ..+|...|++++|+| ++++|+|++.||+|++|++.+..
T Consensus 301 ------------------~~~~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 301 ------------------FSEVFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ------------------SCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred ------------------CCcEeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 344443 347999999999999 79999999999999999996643
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-34 Score=225.07 Aligned_cols=182 Identities=25% Similarity=0.424 Sum_probs=157.8
Q ss_pred CCCCEEEEeeCCCcceeeee-----eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCce
Q psy11036 5 LPILIVALWDIPSEAQVSTF-----TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR-SPDPV 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-~~~~~ 78 (239)
+.|+.|++||+.+++.+..+ .+|. ..|.+++|++.++++|++|+.|++|++||++ ..+.+
T Consensus 177 s~D~~i~~wd~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 177 SGDQTCVLWDVTTGQRISIFGSEFPSGHT--------------ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp CTTSCEEEECTTTCCEEEEECCCSSSSCC--------------SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred CCCCcEEEEEcCCCcEEEEeecccCCCCc--------------cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 57899999999999988877 4566 8999999988678999999999999999998 44666
Q ss_pred eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC-------ceEEEEEcCCCCEEEEEecCCe
Q psy11036 79 MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK-------TVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-------~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
..+ .|...|.+++|+|+++++++++ |+.|++||++ .++.+..+..+.. .|++++|+|+|++|++|+.||.
T Consensus 243 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR-TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT-TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC-CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 666 6999999999999999999999 8999999999 7777777765432 4899999999999999999999
Q ss_pred EEEEEcccceEeeeecceeEEEEEccCCCEEEEEE----ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF----TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
|++||+. ..+....+ .+|.+.|.+++|+|+|++|++|+.|+.|++|++...+
T Consensus 322 i~vwd~~--------------------~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 322 CYVWDTL--------------------LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEETT--------------------TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEECC--------------------CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9999987 23333333 5799999999999999999999999999999997654
No 44
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.2e-34 Score=221.13 Aligned_cols=177 Identities=12% Similarity=0.126 Sum_probs=149.1
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---c
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV---N 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---~ 82 (239)
.|++|+|||+++++++..+. |. ..|.+++|+| +++++++++.+ .+++|+..+++..... .
T Consensus 155 ~d~~i~iwd~~~~~~~~~~~-~~--------------~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 155 VPAIMRIIDPSDLTEKFEIE-TR--------------GEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp SSCEEEEEETTTTEEEEEEE-CS--------------SCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCC
T ss_pred CCCEEEEeECCCCcEEEEeC-CC--------------CceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCC
Confidence 47899999999999988886 54 7899999999 89999998865 5677777777665433 4
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CC----cEEEEEccCCCe---EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GL----DVCIWDMLGGGK---LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~----~i~~~d~~~~~~---~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
|...+.+++|+|+++.+++++ ++ .+.+|++..... ....+..|..+|++++|+|+|++||+|+.|++|+|||
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVK 297 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEE
Confidence 788899999999999999887 54 578888873222 2345678999999999999999999999999999999
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEE-ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
++ ..+++..+ .+|..+|++++|+|||++|||||.|++|+|||+..
T Consensus 298 ~~--------------------~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 298 LK--------------------DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TT--------------------TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CC--------------------CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 88 46666654 68999999999999999999999999999999954
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.8e-34 Score=223.43 Aligned_cols=220 Identities=15% Similarity=0.155 Sum_probs=185.1
Q ss_pred CCCCCCEEEEeeCCCcc------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCC----C---CEEEEeeCCCeEEE
Q psy11036 3 HDLPILIVALWDIPSEA------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS----S---DIVISGSYDKTVNV 69 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~---~~l~s~~~dg~v~v 69 (239)
..+.||.|++||+.+++ .+..+..|. ..|.+++|+| + + ++|++++.|+.|++
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--------------SGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEECCT--------------TCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEE
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEecCC--------------CcEEEEEEec-ccccCCccccEEEEEcCCCCEEE
Confidence 34679999999999887 788888998 9999999999 6 8 89999999999999
Q ss_pred EeCCCCCc-----eeee-cC-----CCCEEEEEEe----cCCcE-EEEeC-CCcEEEEEccCC-----CeEEE-----EE
Q psy11036 70 YDTRSPDP-----VMSV-NH-----GSPVESVLCL----PSGGI-FVTGG-GLDVCIWDMLGG-----GKLLH-----KF 122 (239)
Q Consensus 70 w~~~~~~~-----~~~~-~~-----~~~v~~~~~~----~~~~~-l~~~~-~~~i~~~d~~~~-----~~~~~-----~~ 122 (239)
||+.+++. ...+ .| ...|.+++|+ |++.. +++++ ++.|++||++.. .+.+. .+
T Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 96 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp EEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred EEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence 99998886 6666 46 4899999999 99999 88887 899999999830 33333 55
Q ss_pred -------eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee----------------------------ecc
Q psy11036 123 -------TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF----------------------------TGG 166 (239)
Q Consensus 123 -------~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------------~~~ 166 (239)
..|...|.+++|+|++ .+++++.|+.|++||++ .+.+..+ ..+
T Consensus 176 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 176 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp EEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred eeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 4488999999999999 99999999999999997 3332211 123
Q ss_pred ---eeEEEEEccCCCEEEEEEec-------------ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec---
Q psy11036 167 ---LDVCIWDMLGGGKLLHKFTC-------------HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--- 227 (239)
Q Consensus 167 ---~~i~~~d~~~~~~~~~~~~~-------------h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--- 227 (239)
+.|++||+++ .+++..+.. |...|.+++|+|++++|++++.||.|++||+.+++++..+.
T Consensus 255 ~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 333 (397)
T 1sq9_A 255 NSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHC 333 (397)
T ss_dssp TTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCG
T ss_pred CCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEeccc
Confidence 6799999987 577778888 99999999999999999999999999999999999999887
Q ss_pred ----C---------------CCCeeeeEecC
Q psy11036 228 ----Y---------------PSPVLSIDVSM 239 (239)
Q Consensus 228 ----~---------------~~~v~~~~~sp 239 (239)
+ ..+|++++|+|
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred CcccchhhhhccccccccccCCceeEEEecc
Confidence 4 78999999987
No 46
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=219.36 Aligned_cols=215 Identities=15% Similarity=0.230 Sum_probs=176.5
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCC-CCce-eee-cC
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRS-PDPV-MSV-NH 83 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~-~~~~-~~~-~~ 83 (239)
....++....+.+..+.+|. +.|++++|+|++ +++|++|+.||.|++||+.+ +... ..+ .|
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h 85 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPD--------------DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH 85 (368)
T ss_dssp ---CCSSCTTCCEECSSCCS--------------SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC
T ss_pred EeccCCCCCcceeEeccCCC--------------CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc
Confidence 33445666667778888888 999999999943 69999999999999999987 5544 344 69
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEE--cCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL--ASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~--~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
...|.+++|+|++++|++++ |+.|++||++ .++... +..|...|.+++| +|++++|++++.|+.|++||++ .+.
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLS-SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcC-CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 99999999999999999988 8999999998 666554 5669999999999 8999999999999999999987 332
Q ss_pred Eeee-------------------------------------------------------------------ecceeEEEE
Q psy11036 160 VSSF-------------------------------------------------------------------TGGLDVCIW 172 (239)
Q Consensus 160 ~~~~-------------------------------------------------------------------~~~~~i~~~ 172 (239)
+..+ ..++.+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 164 MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 2211 223447778
Q ss_pred EccCCC--EEEEEEecccC------------cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEe
Q psy11036 173 DMLGGG--KLLHKFTCHHK------------TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDV 237 (239)
Q Consensus 173 d~~~~~--~~~~~~~~h~~------------~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 237 (239)
|+.... .....+.+|.. +|.+++|+|++++|++++.||.|++||+.+++++..+. +..+|.+++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 323 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEE
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEE
Confidence 776542 34556666665 79999999999999999999999999999999999998 7889999999
Q ss_pred cC
Q psy11036 238 SM 239 (239)
Q Consensus 238 sp 239 (239)
+|
T Consensus 324 s~ 325 (368)
T 3mmy_A 324 NH 325 (368)
T ss_dssp CT
T ss_pred CC
Confidence 97
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.9e-33 Score=228.02 Aligned_cols=213 Identities=26% Similarity=0.416 Sum_probs=186.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.|+.|++||. +++....+.+|. ..|.+++|+| +++.+++++.|++|++||..... ...+ .|
T Consensus 281 ~~d~~i~~w~~-~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~ 343 (577)
T 2ymu_A 281 SDDKTVKLWNR-NGQLLQTLTGHS--------------SSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQH-LQTLTGH 343 (577)
T ss_dssp ETTSCEEEEET-TSCEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSCEEEEETTSCE-EEEECCC
T ss_pred eCCCEEEEEeC-CCcEEEEEecCC--------------CCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCe-eEEEeCC
Confidence 36799999996 567788899998 9999999999 89999999999999999986554 4444 78
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
...+.+++|+|+++.+++++ ++.+++||. .++.+..+.+|...|.+++|+|++++|++++.|+.|++||..++.+..
T Consensus 344 ~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~--~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~ 421 (577)
T 2ymu_A 344 SSSVWGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT 421 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEET--TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEcC--CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEE
Confidence 89999999999999999988 799999996 577888999999999999999999999999999999999977554444
Q ss_pred e----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 163 F----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 163 ~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
+ ..++.+++||.. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||. ++
T Consensus 422 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~ 498 (577)
T 2ymu_A 422 LTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 498 (577)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC
Confidence 3 234569999963 5677888999999999999999999999999999999995 77
Q ss_pred eeeEEec-CCCCeeeeEecC
Q psy11036 221 SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 221 ~~~~~~~-~~~~v~~~~~sp 239 (239)
+++..+. |...|++++|+|
T Consensus 499 ~~~~~~~~h~~~v~~l~~s~ 518 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFSP 518 (577)
T ss_dssp CEEEEEECCSSCEEEEEECT
T ss_pred CEEEEEeCCCCCEEEEEEcC
Confidence 8888887 888999999997
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.5e-35 Score=223.18 Aligned_cols=204 Identities=20% Similarity=0.238 Sum_probs=165.7
Q ss_pred CCCCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCC--cee
Q psy11036 5 LPILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPD--PVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~--~~~ 79 (239)
+.|++|+|||+.+++ .+..+.+|. ++|.+++|++. ++++|++|+.|++|++||+++++ ...
T Consensus 32 s~D~~v~lwd~~~~~~~~~~~l~gH~--------------~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 32 SSDRSVKIFDVRNGGQILIADLRGHE--------------GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp ETTTEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEE
T ss_pred eCCCeEEEEEecCCCcEEEEEEcCCC--------------ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEE
Confidence 568999999998764 467889998 99999999852 47899999999999999998874 344
Q ss_pred ee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCC----------------
Q psy11036 80 SV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASG---------------- 137 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~---------------- 137 (239)
.+ .|...|.+++|+|+ +.++++++ |+.|++||++.... ....+.+|...+.+++|+|+
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 45 68999999999997 78899988 89999999983322 23445678899999999997
Q ss_pred -CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC----CeEEEEcCCceE
Q psy11036 138 -GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG----KRLISASLDHHA 212 (239)
Q Consensus 138 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~s~d~~i 212 (239)
+++|++++.|+.|++||++.. ...++...+.+|...|.+++|+|++ ++|++++.|++|
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~-----------------~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEED-----------------GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTT-----------------SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccceEEEecCCCeEEEEEeCCC-----------------CccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 478999999999999998610 0013555678999999999999986 789999999999
Q ss_pred EEEEccCC---e-eeEEe-cCCCCeeeeEecC
Q psy11036 213 KIYEMVNF---S-PVHTL-DYPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~---~-~~~~~-~~~~~v~~~~~sp 239 (239)
++|++.+. + ....+ .+...|.+++|+|
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp 272 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI 272 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEECSSCEEEEEECT
T ss_pred EEEEccCccccchhhhhhhcCCCcEEEEEEcC
Confidence 99999763 1 12223 3788999999997
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-33 Score=218.75 Aligned_cols=217 Identities=18% Similarity=0.205 Sum_probs=177.4
Q ss_pred CCCCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.|+.|++||+.+++ .+..+.+|. ..|.+++|+| ++++|++++.||.|++||+.+++....+
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELKEHN--------------GQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred eCCCEEEEEeCCCCcEEeeeeecCCC--------------CcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEE
Confidence 468999999999887 888999998 9999999999 8999999999999999999888644433
Q ss_pred --cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--EEEE-EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEc
Q psy11036 82 --NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK--LLHK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 82 --~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~--~~~~-~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~ 155 (239)
.|...+.+++|+|+++++++++ ++.|++||++.... .... ...|...|.+++|+|++++|++++.|+.|++||+
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 5889999999999999999988 79999999984332 2233 3568899999999999999999999999999997
Q ss_pred ccceEeeeecceeEEEEEc-cCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCee
Q psy11036 156 TLKTVSSFTGGLDVCIWDM-LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
+....... .....|.. ....+++..+..|...|.+++|+|++++|++++.|+.|++||+++++++..+. +..++.
T Consensus 172 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 248 (372)
T 1k8k_C 172 YIKEVEER---PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 248 (372)
T ss_dssp CCTTTSCC---CCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred cccccccc---ccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeE
Confidence 51100000 00000000 01256677778899999999999999999999999999999999999999998 677999
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+++|+|
T Consensus 249 ~~~~~~ 254 (372)
T 1k8k_C 249 AVTFIT 254 (372)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999986
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=216.76 Aligned_cols=201 Identities=16% Similarity=0.261 Sum_probs=181.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.||.|++||+.+++.+..+..|. ..|.+++|+| ++++|++++.||.|++||+.+++....+.+.
T Consensus 51 ~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 115 (369)
T 3zwl_B 51 SKDSSASVWYSLNGERLGTLDGHT--------------GTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWKSP 115 (369)
T ss_dssp ESSSCEEEEETTTCCEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECS
T ss_pred eCCCEEEEEeCCCchhhhhhhhcC--------------CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 468999999999999999999998 9999999999 8999999999999999999999999888899
Q ss_pred CCEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCC----------eEEEEEeccCC--ceEEEEEcCCCCEEEEEec
Q psy11036 85 SPVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGG----------KLLHKFTCHHK--TVTSLCLASGGKRLISASL 146 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~----------~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~ 146 (239)
..+.+++|+|++.++++++ + +.|.+||++... .....+..|.. .+.+++|+|++++|++++.
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK 195 (369)
T ss_dssp SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET
T ss_pred CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC
Confidence 9999999999999999887 5 899999997332 23445556666 9999999999999999999
Q ss_pred CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 147 DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
||.|++||++ +..+.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus 196 dg~i~i~d~~-------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 196 DGKISKYDVS-------------------NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp TSEEEEEETT-------------------TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECC-------------------CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 9999999987 225777788889999999999999999999999999999999999999999
Q ss_pred cCCCCeeeeEecC
Q psy11036 227 DYPSPVLSIDVSM 239 (239)
Q Consensus 227 ~~~~~v~~~~~sp 239 (239)
.+..++.+++|+|
T Consensus 257 ~~~~~~~~~~~~~ 269 (369)
T 3zwl_B 257 ETDCPLNTAVITP 269 (369)
T ss_dssp ECSSCEEEEEECS
T ss_pred cCCCCceeEEecC
Confidence 9999999999987
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.7e-32 Score=217.45 Aligned_cols=216 Identities=19% Similarity=0.280 Sum_probs=185.3
Q ss_pred CCCCEEEEeeCCCcceeeeee--CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFT--NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
|-|++|+|||+.+++....+. .|. ..|++++|+| ++++|++|+.||+|++||+.+++.+..+
T Consensus 122 gld~tV~lWd~~tg~~~~~~~~~~~~--------------~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQLLQMEQPG--------------EYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTT--------------CCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCC--------------CcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEe
Confidence 457999999999999887765 455 7899999999 8999999999999999999999988888
Q ss_pred cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
.|...+.++.++ +..+++++ |+.+.+||.+.....+..+.+|...+..+.++|+++++++++.|+.+++|+.. ++.
T Consensus 187 ~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 187 SHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 264 (420)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred CCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence 688999988775 67888888 89999999987777888999999999999999999999999999999999986 221
Q ss_pred ----Eeee-----------------------e--cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc--C
Q psy11036 160 ----VSSF-----------------------T--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS--L 208 (239)
Q Consensus 160 ----~~~~-----------------------~--~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~ 208 (239)
+... . .++.|++||+.+ +++...+..| ..+.++.|+|+++.+++++ .
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDAH-SQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEECS-SCEEEEEEETTTTEEEEEECTT
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeeccc-cceeeeeecCCCCeEEEEEecC
Confidence 1110 1 245699999987 6667676654 5688999999999888765 7
Q ss_pred CceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 209 DHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
|+.|+|||+.+++++.++. |.+.|++++|+|
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp 374 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 374 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 9999999999999999998 889999999997
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=227.31 Aligned_cols=219 Identities=18% Similarity=0.269 Sum_probs=183.0
Q ss_pred CCCCEEEEeeCCCcc---eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC----CCc
Q psy11036 5 LPILIVALWDIPSEA---QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS----PDP 77 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~----~~~ 77 (239)
+.|+.|++||+.+++ ++..+ .|. ..|++++|+| ++.+|++++.||.|++||+.+ .+.
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~-~~~--------------~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~ 105 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASL-QVD--------------SKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINS 105 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCC-CCS--------------SCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCE
T ss_pred CCCCeEEEEEccCCCCCcEEEEE-ecC--------------CceEEEEECC-CCCeEEEEccCCeEEEeecccccccccc
Confidence 578899999998876 33333 355 8999999999 899999999999999999987 345
Q ss_pred eeee-cCCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCC------eE--EEEEeccCCceEEEEEcCC-CCEEEEEe
Q psy11036 78 VMSV-NHGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGG------KL--LHKFTCHHKTVTSLCLASG-GKRLISAS 145 (239)
Q Consensus 78 ~~~~-~~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~------~~--~~~~~~~~~~i~~i~~~~~-~~~l~~~~ 145 (239)
...+ .|...|.+++|+|+ +.++++++ |+.|++||++... .. ......|...|.+++|+|+ +.+|++++
T Consensus 106 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 106 MARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp EEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred hhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 5555 69999999999998 88999988 7999999998333 11 1223578899999999998 78999999
Q ss_pred cCCeEEEEEcc-cceEeee-----------------------------ecce---eEEEEEccCCCEEEEEEe-cccCcE
Q psy11036 146 LDHHAKIYEMT-LKTVSSF-----------------------------TGGL---DVCIWDMLGGGKLLHKFT-CHHKTV 191 (239)
Q Consensus 146 ~d~~i~i~d~~-~~~~~~~-----------------------------~~~~---~i~~~d~~~~~~~~~~~~-~h~~~v 191 (239)
.|+.|++||++ .+.+..+ ..++ .+++||+++...+...+. +|...|
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGI 265 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCE
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCce
Confidence 99999999997 3332221 1233 789999988667777787 899999
Q ss_pred EEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 192 TSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+++|+| ++++|++++.|+.|++||+.+++++..+. +...|.+++|+|
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp EEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECT
T ss_pred eEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECC
Confidence 9999999 99999999999999999999999999988 788999999987
No 53
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.7e-33 Score=212.68 Aligned_cols=201 Identities=19% Similarity=0.364 Sum_probs=160.7
Q ss_pred CCCCCEEEEeeCCCcc-----eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q psy11036 4 DLPILIVALWDIPSEA-----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~ 78 (239)
.+.||+|+|||+.+.+ +...+.+|. ..|.+++|+| ++++|++++.|+.|++|+.......
T Consensus 57 ~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~--------------~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 57 ASRDKTIIMWKLTRDETNYGIPQRALRGHS--------------HFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp EETTSCEEEEEECCSSSCSEEEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCeEEEEECCCCCcccceeeEEEeCCC--------------CCEEEEEECC-CCCEEEEEcccccceEEeeccccee
Confidence 3578999999987643 466788888 9999999999 8999999999999999987643211
Q ss_pred ee-----------------------------------------e---cCCCCEEEEEEecCC--cEEEEeC-CCcEEEEE
Q psy11036 79 MS-----------------------------------------V---NHGSPVESVLCLPSG--GIFVTGG-GLDVCIWD 111 (239)
Q Consensus 79 ~~-----------------------------------------~---~~~~~v~~~~~~~~~--~~l~~~~-~~~i~~~d 111 (239)
.. . .|...+..++|++++ .++++++ |+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 10 0 245677888888754 4566665 79999999
Q ss_pred ccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeee--------------------ecceeEE
Q psy11036 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF--------------------TGGLDVC 170 (239)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~--------------------~~~~~i~ 170 (239)
++ ..+....+.+|..+|++++|+|++++|++++.|+.|++||++ .+.+..+ ..++.|+
T Consensus 202 ~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~ 280 (340)
T 4aow_A 202 LA-NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIK 280 (340)
T ss_dssp TT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEE
T ss_pred CC-CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEE
Confidence 98 788888999999999999999999999999999999999998 5544443 2345599
Q ss_pred EEEccCCCEEEEE---------EecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 171 IWDMLGGGKLLHK---------FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 171 ~~d~~~~~~~~~~---------~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
+||+++ ...+.. ..+|...|++++|+|++++|++|+.||.|+|||+++|+
T Consensus 281 iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 281 IWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999876 333333 34688999999999999999999999999999999986
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-34 Score=231.05 Aligned_cols=202 Identities=11% Similarity=0.012 Sum_probs=162.5
Q ss_pred CCCCCCEEEEeeCCCccee----eeeeCCceeeccceeeccCCCCCeEEEEEecC-----CCCEEEEeeCCCeEEEEeCC
Q psy11036 3 HDLPILIVALWDIPSEAQV----STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-----SSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~s~~~dg~v~vw~~~ 73 (239)
+.+.|++|+|||+.+++.. .++..|. +.|.+++|+|. ++.+|++++.||+|++||+.
T Consensus 178 S~s~D~tI~iWd~~~~~~~~~~~~~l~~~~--------------~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~ 243 (524)
T 2j04_B 178 KEKHSSCIQIFKMNTSTLHCVKVQTIVHSF--------------GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEII 243 (524)
T ss_dssp ----CEEEEEEEEETTTCCEEEEEEEEECC--------------CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECC
T ss_pred cCCCCceEEEEEccCCCCCceEEEEEEecC--------------CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcC
Confidence 4567899999999877642 3456666 88999999994 25799999999999999998
Q ss_pred CCCce-----------eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEE--EEcCCC
Q psy11036 74 SPDPV-----------MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSL--CLASGG 138 (239)
Q Consensus 74 ~~~~~-----------~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i--~~~~~~ 138 (239)
+++.. ..+ .|...|++++|+|++ .|++|+ ||+|++||++....+...+.+|...|.++ +|+|++
T Consensus 244 ~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g 322 (524)
T 2j04_B 244 DNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE 322 (524)
T ss_dssp CCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS
T ss_pred CCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC
Confidence 76421 234 588999999999865 677777 89999999984445566788999999999 578887
Q ss_pred -CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC--cEEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 139 -KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 139 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
.+|++++.|++|+|||++ ..++...+.+|.. .|.+++|+|+++.+++++.|++|++|
T Consensus 323 ~~~laS~S~D~tvklWD~~--------------------~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw 382 (524)
T 2j04_B 323 DTVVSTVAVDGYFYIFNPK--------------------DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV 382 (524)
T ss_dssp CCEEEEEETTSEEEEECGG--------------------GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred CeEEEEeccCCeEEEEECC--------------------CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence 899999999999999998 2233333345543 47899999999999999999999999
Q ss_pred EccCCeeeEEec-CCCCeeeeEecC
Q psy11036 216 EMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 216 d~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
|++++..+..+. |.+.|++++|||
T Consensus 383 d~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 383 PSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp ETTCTTCCEEEEECSSCEEEEECCS
T ss_pred ECcccccceeeecCCCceEEEEeCC
Confidence 999998877776 899999999998
No 55
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=206.72 Aligned_cols=214 Identities=20% Similarity=0.300 Sum_probs=183.7
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC---Cceee
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP---DPVMS 80 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~---~~~~~ 80 (239)
.+.||.|++||+.+++....+..|. ..|.+++|+| ++++|++++.||.+++|++... +....
T Consensus 35 ~~~dg~v~vw~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~ 99 (313)
T 3odt_A 35 VSRDGTVRLWSKDDQWLGTVVYTGQ--------------GFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYT 99 (313)
T ss_dssp EETTSEEEEEEESSSEEEEEEEECS--------------SCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CE
T ss_pred EEcCCcEEEEECCCCEEEEEeecCC--------------ccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccc
Confidence 4678999999999999899999998 9999999999 8999999999999999998765 34445
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT- 156 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~- 156 (239)
+ .|...|.+++| ++..+++++ |+.|++|| ..+....+..|...+.+++|.| +++.+++++.|+.|++||..
T Consensus 100 ~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 174 (313)
T 3odt_A 100 LIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK 174 (313)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE
T ss_pred hhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc
Confidence 5 68899999999 466777777 89999999 4677888889999999999988 89999999999999999965
Q ss_pred c-ceEe-------------------eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 157 L-KTVS-------------------SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 157 ~-~~~~-------------------~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
. ..+. ....++.+++||+++ .+++..+.+|...|.+++|+|++ .|++++.||.|++||
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWS 252 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEEC
T ss_pred eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEE
Confidence 1 1111 113455699999987 67888889999999999999999 588999999999999
Q ss_pred ccCCeeeEEec-CCCCeeeeEecC
Q psy11036 217 MVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.+++++..+. +..+|.+++|+|
T Consensus 253 ~~~~~~~~~~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 253 KENGSLKQVITLPAISIWSVDCMS 276 (313)
T ss_dssp TTTCCEEEEEECSSSCEEEEEECT
T ss_pred CCCCceeEEEeccCceEEEEEEcc
Confidence 99999999988 667999999987
No 56
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-32 Score=242.63 Aligned_cols=219 Identities=16% Similarity=0.185 Sum_probs=196.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++||+.+++.+..+.+|. +.|.+++|+| ++++|++++.|++|++||+.+++.+..+ .|
T Consensus 634 ~~d~~i~vw~~~~~~~~~~~~~h~--------------~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 634 GADKTLQVFKAETGEKLLDIKAHE--------------DEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred eCCCeEEEEECCCCCEEEEeccCC--------------CCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 468999999999999999999999 9999999999 8999999999999999999999998888 79
Q ss_pred CCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
...|.+++|+| ++..+++++ |+.|++||++ .++....+.+|...|.+++|+|+++++++++.||.|++||++ ++.
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~-~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN-QKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETT-SSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECC-CcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcc
Confidence 99999999999 555787877 7999999999 788889999999999999999999999999999999999997 433
Q ss_pred Eeee----------------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEE
Q psy11036 160 VSSF----------------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 160 ~~~~----------------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 205 (239)
...+ .+.+.+.+||..+.........+|...|.+++|+|+++++++
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 778 RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEE
T ss_pred cceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEE
Confidence 3222 234568999998866665556689999999999999999999
Q ss_pred EcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 206 ASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 206 ~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++.||.|++||+.+++.+..+. |...|.+++|+|
T Consensus 858 ~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 858 ALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp ECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 9999999999999999999888 888999999987
No 57
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.2e-33 Score=215.21 Aligned_cols=211 Identities=12% Similarity=0.103 Sum_probs=164.3
Q ss_pred CCCCEEEEeeCCCcceee-eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEE--EeeCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDIPSEAQVS-TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVI--SGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~--s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
+.|+.+++|++.+..... ...... ......+...+.+++|+| ++++++ +++.|++|++||+++++++..+
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVD------FDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEEC------SSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred cCCCcEEEEEecCCCceEEEeeeec------eeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 357889999986543221 111100 011112226689999999 777765 4557999999999999999888
Q ss_pred cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEE--EEeccCCceEEEEEcCCCCEEEEEecCC----eEEEEEc
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLH--KFTCHHKTVTSLCLASGGKRLISASLDH----HAKIYEM 155 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~i~~~~~~~~l~~~~~d~----~i~i~d~ 155 (239)
.|...|.+++|+|+|+++++++++.+.+|+.. .++... ....|...|.+++|+|+++.+++++.|+ .+++|++
T Consensus 174 ~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 174 ETRGEVKDLHFSTDGKVVAYITGSSLEVISTV-TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp ECSSCCCEEEECTTSSEEEEECSSCEEEEETT-TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred CCCCceEEEEEccCCceEEeccceeEEEEEec-cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 88899999999999999999998888888887 444433 3346888999999999999999999887 5667776
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCee
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVL 233 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~ 233 (239)
..... .......+.+|..+|++++|+|||++||+|+.|+.|+|||+++++++.++. |..+|+
T Consensus 253 ~~~~~----------------~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~ 316 (365)
T 4h5i_A 253 KSGNT----------------SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAIT 316 (365)
T ss_dssp ETTEE----------------EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEE
T ss_pred cccee----------------cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEE
Confidence 51100 012234567899999999999999999999999999999999999999864 889999
Q ss_pred eeEecC
Q psy11036 234 SIDVSM 239 (239)
Q Consensus 234 ~~~~sp 239 (239)
+++|||
T Consensus 317 ~v~fSp 322 (365)
T 4h5i_A 317 EVTISP 322 (365)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999998
No 58
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-32 Score=208.40 Aligned_cols=178 Identities=20% Similarity=0.249 Sum_probs=150.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC--Cceeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP--DPVMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~ 116 (239)
+.|++++|+| ++++|++|+.|++|++||+... +.+..+ +|..+|.+++|+| ++.+|++++ |++|++||++...
T Consensus 10 ~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 9999999999 8999999999999999999743 556666 7999999999986 388999988 8999999998322
Q ss_pred -eEEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 117 -KLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 117 -~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
..+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.. .......+.+|...|.+
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~------------------~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN------------------GTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS------------------SCBCCEEEECCSSCEEE
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC------------------CceeeeeeecccCccce
Confidence 355677889999999999997 889999999999999998711 01113456789999999
Q ss_pred EEEccC-------------CCeEEEEcCCceEEEEEccCCe----eeEEec-CCCCeeeeEecC
Q psy11036 194 LCLASG-------------GKRLISASLDHHAKIYEMVNFS----PVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 194 ~~~s~~-------------~~~l~s~s~d~~i~iwd~~~~~----~~~~~~-~~~~v~~~~~sp 239 (239)
++|+|+ +++|++|+.|+.|++||+.+++ ....+. |...|.+++|+|
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 999997 5799999999999999998765 556666 888999999997
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-32 Score=219.89 Aligned_cols=198 Identities=22% Similarity=0.273 Sum_probs=176.8
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.||.|++||+.+++.+..+.+|. +.|.+++|+| ++ ++++|+.||+|++||+++++....+ .
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~--------------~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHD--------------GGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCC--------------cCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 4678999999999999999999999 9999999998 45 9999999999999999999988888 5
Q ss_pred CCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCCe----------------------EEEEEeccCCceEEEEEcCC
Q psy11036 83 HGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGK----------------------LLHKFTCHHKTVTSLCLASG 137 (239)
Q Consensus 83 ~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~----------------------~~~~~~~~~~~i~~i~~~~~ 137 (239)
|...|.+++|++ ++.++++++ |+.|++||++.... ....+.+|...+.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 999999999994 778888888 89999999983321 255677888888877 567
Q ss_pred CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 138 GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 138 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
++++++++.|+.|++||++ ..+++..+.+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 280 ~~~l~~~~~d~~i~vwd~~--------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVA--------------------QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp TTEEEEEETTSCEEEEETT--------------------TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred CCEEEEEeCCCeEEEEECC--------------------CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 8999999999999999988 56777778899999999999999999999999999999999
Q ss_pred cCCeeeEEec-CCCCeeeeEecC
Q psy11036 218 VNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 218 ~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++++++..+. |...|.+++|++
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLSD 362 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEECS
T ss_pred CCCcEEEEEeCCCCcEEEEEEcC
Confidence 9999999998 888999999874
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1e-32 Score=231.49 Aligned_cols=198 Identities=20% Similarity=0.281 Sum_probs=165.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.||.|+|||+.+++.+..+.+|. ..|.+++|+| ++++|++++.|++|++||+.........
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~h~--------------~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 513 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVGHT--------------KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGG 513 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSST
T ss_pred eCCCcEEEEECCCCcceeEEeCCC--------------CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCC
Confidence 468999999999999999999999 9999999999 8999999999999999998654333222
Q ss_pred -cCCCCEEEEEEecCC--cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-
Q psy11036 82 -NHGSPVESVLCLPSG--GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT- 156 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~--~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~- 156 (239)
.|...|.+++|+|++ ..+++++ |+.|++||++ ..+....+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS-NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC-CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 477889999999986 5677777 8999999998 778888999999999999999999999999999999999998
Q ss_pred cceEeee--------------------ecceeEEEEEccCCCEEEEEEecc-------------------cCcEEEEEEc
Q psy11036 157 LKTVSSF--------------------TGGLDVCIWDMLGGGKLLHKFTCH-------------------HKTVTSLCLA 197 (239)
Q Consensus 157 ~~~~~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h-------------------~~~v~~~~~s 197 (239)
++.+..+ ..+..|++||+++ .+.+..+..+ ...+++++|+
T Consensus 593 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 671 (694)
T 3dm0_A 593 GKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWS 671 (694)
T ss_dssp TEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEEC
T ss_pred CceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEc
Confidence 5554443 1234499999987 4555544322 1237899999
Q ss_pred cCCCeEEEEcCCceEEEEEccC
Q psy11036 198 SGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
|+|++|++|+.||.|++|++..
T Consensus 672 pdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 672 ADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp TTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCEEEEEcCCCeEEEEeccC
Confidence 9999999999999999999853
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-33 Score=219.22 Aligned_cols=217 Identities=13% Similarity=0.185 Sum_probs=186.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-C
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-H 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~ 83 (239)
+.||.|++|| .+++.+..+..|. ..|.+++|+| ++++|++++.|+.|++||+.+++....+. +
T Consensus 127 ~~dg~i~i~~-~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 127 VENGELRLWN-KTGALLNVLNFHR--------------APIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp ETTSCEEEEE-TTSCEEEEECCCC--------------SCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred eCCCeEEEEe-CCCCeeeeccCCC--------------ccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 3679999999 6788888999998 9999999999 89999999999999999999998887773 4
Q ss_pred CCC---------------EEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 84 GSP---------------VESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 84 ~~~---------------v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
... +.+++|+|++.+++.+.++.|++||++ ..+.+..+..|...|.+++|+|++++|++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT-EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETT-CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC-CCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 444 899999998765544448999999998 7777888889999999999999999999999999
Q ss_pred eEEEEEcc-cceEeee---------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEE
Q psy11036 149 HAKIYEMT-LKTVSSF---------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 206 (239)
Q Consensus 149 ~i~i~d~~-~~~~~~~---------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 206 (239)
.|++||++ .+.+..+ ..++.+++||+.+ .+.+..+..|...|.+++|+|++++|+++
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEEE
Confidence 99999987 3333222 2355699999986 67888888999999999999999999999
Q ss_pred cCCceEEEEEccCCe--------------------eeEEec-CCC--CeeeeEecC
Q psy11036 207 SLDHHAKIYEMVNFS--------------------PVHTLD-YPS--PVLSIDVSM 239 (239)
Q Consensus 207 s~d~~i~iwd~~~~~--------------------~~~~~~-~~~--~v~~~~~sp 239 (239)
+.||.|++||+.+++ ++..+. +.. .|.+++|+|
T Consensus 349 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 349 FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp ETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred ECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 999999999999888 888887 544 999999987
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-31 Score=214.00 Aligned_cols=211 Identities=25% Similarity=0.371 Sum_probs=181.7
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.||.|++||+.+++.+..+.+|. ..|.+++|++ +.+++|+.||+|++||+.+++....+ .
T Consensus 175 ~~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 175 GSTDRTLKVWNAETGECIHTLYGHT--------------STVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEEC
T ss_pred EeCCCeEEEEECCcCcEEEEECCCC--------------CcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3567888888888888888888887 8999999964 67999999999999999999888877 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
|...+.++++ ++..+++++ |+.|++||++ .++.+..+.+|...|.+++| ++.++++++.|+.|++||++ ++.+
T Consensus 238 ~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 238 HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CSSCEEEEEE--CSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CcccEEEEEE--CCCEEEEEcCCCEEEEEECC-CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 8899999998 577788777 8999999998 78889999999999999999 78899999999999999998 6555
Q ss_pred eee--------------------ecceeEEEEEccCCCEEEEEEec---ccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 161 SSF--------------------TGGLDVCIWDMLGGGKLLHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 161 ~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
..+ ..++.+++||+++ ++.+..+.. |...|.+++|+ +++|++|+.||.|++||+
T Consensus 313 ~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 313 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 544 2345699999976 567777776 88899999995 689999999999999999
Q ss_pred cCCeeeEEe------cCCCCeeeeEecC
Q psy11036 218 VNFSPVHTL------DYPSPVLSIDVSM 239 (239)
Q Consensus 218 ~~~~~~~~~------~~~~~v~~~~~sp 239 (239)
.+++.+..+ .+.+.|.+++|+|
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 390 KTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp TTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred CCCceeeeeeccccCCCCceEEEEEecC
Confidence 999999888 3678899999987
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-32 Score=211.12 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=162.8
Q ss_pred CCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCC---
Q psy11036 5 LPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPD--- 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~--- 76 (239)
+.||.|++||+.++ +....+.+|. ..|++++|+|. ++++|++++.||.|++||+++++
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 30 SSDQHIKVFKLDKDTSNWELSDSWRAHD--------------SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp ETTSEEEEEEECSSSCCEEEEEEEECCS--------------SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT
T ss_pred eCCCeEEEEECCCCCCcceecceeccCC--------------CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccc
Confidence 46899999999876 4667778888 99999999994 38899999999999999998763
Q ss_pred ------ceeee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCC------------------------------
Q psy11036 77 ------PVMSV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGG------------------------------ 116 (239)
Q Consensus 77 ------~~~~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~------------------------------ 116 (239)
....+ .|...|.+++|+|+ +.++++++ |+.|++||++...
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 34445 68899999999999 99999888 8999999986321
Q ss_pred -----------------------------eEEEEEeccCCceEEEEEcCCC----CEEEEEecCCeEEEEEcc-cceEee
Q psy11036 117 -----------------------------KLLHKFTCHHKTVTSLCLASGG----KRLISASLDHHAKIYEMT-LKTVSS 162 (239)
Q Consensus 117 -----------------------------~~~~~~~~~~~~i~~i~~~~~~----~~l~~~~~d~~i~i~d~~-~~~~~~ 162 (239)
..+..+.+|...|.+++|+|++ ++|++++.||.|++||++ ......
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 1144556789999999999998 899999999999999998 221111
Q ss_pred ee--------------------------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 163 FT--------------------------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 163 ~~--------------------------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.. ....+.+|+... .+.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ-VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp -----------------------------------CCSEE-EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeeccccc-ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 10 000122333222 467778889999999999999999999999999999999
Q ss_pred ccCCeeeEEec
Q psy11036 217 MVNFSPVHTLD 227 (239)
Q Consensus 217 ~~~~~~~~~~~ 227 (239)
+.+++.+..+.
T Consensus 335 ~~~~~~~~~~~ 345 (351)
T 3f3f_A 335 ATYSNEFKCMS 345 (351)
T ss_dssp ECTTSCEEEEE
T ss_pred cCcCcchhhee
Confidence 99887665544
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=213.28 Aligned_cols=219 Identities=14% Similarity=0.188 Sum_probs=175.2
Q ss_pred CCCEEEEeeCCCcceeeeee-CCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCC-ceeee
Q psy11036 6 PILIVALWDIPSEAQVSTFT-NHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSPD-PVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~~-~~~~~ 81 (239)
.||.|++||+.+++...... .|. ..|.+++|+|+. +++|++|+.||.|++||+.+++ ....+
T Consensus 42 ~d~~v~iw~~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 107 (357)
T 3i2n_A 42 GTGVIQLYEIQHGDLKLLREIEKA--------------KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSV 107 (357)
T ss_dssp CCEEEEEEEECSSSEEEEEEEEES--------------SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEE
T ss_pred CCcEEEEEeCCCCcccceeeeccc--------------CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEE
Confidence 38999999999887655433 576 899999999942 6999999999999999999887 66666
Q ss_pred -cCCCCEEEEEE------ecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC----ceEEEE----EcCCCCEEEEEe
Q psy11036 82 -NHGSPVESVLC------LPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK----TVTSLC----LASGGKRLISAS 145 (239)
Q Consensus 82 -~~~~~v~~~~~------~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~----~i~~i~----~~~~~~~l~~~~ 145 (239)
.|...|.++.| +|+++.+++++ |+.|++||++.....+..+..|.+ .+.+++ |+|+++++++++
T Consensus 108 ~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 108 KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 68999999965 67899999988 899999999844446777776655 889998 688999999999
Q ss_pred cCCeEEEEEcc-cceEeee------------------------ecceeEEEEEccCCCEEEE-----EEecccCcEEEEE
Q psy11036 146 LDHHAKIYEMT-LKTVSSF------------------------TGGLDVCIWDMLGGGKLLH-----KFTCHHKTVTSLC 195 (239)
Q Consensus 146 ~d~~i~i~d~~-~~~~~~~------------------------~~~~~i~~~d~~~~~~~~~-----~~~~h~~~v~~~~ 195 (239)
.|+.|++||++ .+..... ..++.+++||+++ .++.. .+.+|...|.+++
T Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~ 266 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVR 266 (357)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEE
T ss_pred cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEE
Confidence 99999999998 3322111 1234589999876 23222 3448999999999
Q ss_pred EccCCC-eEEEEcCCceEEEEEccCC-------------------eeeEEec-CCCCeeeeEecC
Q psy11036 196 LASGGK-RLISASLDHHAKIYEMVNF-------------------SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~-~l~s~s~d~~i~iwd~~~~-------------------~~~~~~~-~~~~v~~~~~sp 239 (239)
|+|+++ +|++++.||.|++||+.++ +.+..+. +..+|.+++|+|
T Consensus 267 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP 331 (357)
T ss_dssp EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS
T ss_pred ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC
Confidence 999998 8999999999999999754 3555665 888999999987
No 65
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=224.25 Aligned_cols=217 Identities=12% Similarity=0.199 Sum_probs=164.9
Q ss_pred CCCCEEEEeeCCCcc-----------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC--CEEEEeeCCCeEEEEe
Q psy11036 5 LPILIVALWDIPSEA-----------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS--DIVISGSYDKTVNVYD 71 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~v~vw~ 71 (239)
+.||.|+|||+.+++ ....+.+|...+. ........+.|++++|+| ++ .+|++++.|++|++||
T Consensus 47 ~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~V~~l~~~~-~~~~~~l~s~s~d~~i~iw~ 123 (447)
T 3dw8_B 47 DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFD--YLKSLEIEEKINKIRWLP-QKNAAQFLLSTNDKTIKLWK 123 (447)
T ss_dssp ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEE--GGGTEEECCCCCEEEECC-CCSSSEEEEEECSSCEEEEE
T ss_pred cCCCeEEEEEecCCCCCCcccccceeEeccccccccccc--ccccccccCceEEEEEcC-CCCcceEEEeCCCCeEEEEe
Confidence 468999999998876 4667777741000 000000015699999999 55 7999999999999999
Q ss_pred CCCCCce---------------------------------------eee--cCCCCEEEEEEecCCcEEEEeCCCcEEEE
Q psy11036 72 TRSPDPV---------------------------------------MSV--NHGSPVESVLCLPSGGIFVTGGGLDVCIW 110 (239)
Q Consensus 72 ~~~~~~~---------------------------------------~~~--~~~~~v~~~~~~~~~~~l~~~~~~~i~~~ 110 (239)
+.+++.. ..+ .|...|.+++|+|++++++++.|+.|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iw 203 (447)
T 3dw8_B 124 ISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLW 203 (447)
T ss_dssp EEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEE
T ss_pred cccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEE
Confidence 8764321 122 58899999999999999999988999999
Q ss_pred EccCCCeEEEE-------EeccCCceEEEEEcCCC-CEEEEEecCCeEEEEEcc-cce----------------------
Q psy11036 111 DMLGGGKLLHK-------FTCHHKTVTSLCLASGG-KRLISASLDHHAKIYEMT-LKT---------------------- 159 (239)
Q Consensus 111 d~~~~~~~~~~-------~~~~~~~i~~i~~~~~~-~~l~~~~~d~~i~i~d~~-~~~---------------------- 159 (239)
|++...+.+.. +..|...|.+++|+|++ ++|++++.|+.|++||++ ++.
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (447)
T 3dw8_B 204 HLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSE 283 (447)
T ss_dssp ETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHH
T ss_pred ECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccc
Confidence 99743444442 45789999999999998 999999999999999987 332
Q ss_pred ----Eeee-----------ecceeEEEEEccCCCEEEEEEecccCc---------------EEEEEEccCCCeEEEEcCC
Q psy11036 160 ----VSSF-----------TGGLDVCIWDMLGGGKLLHKFTCHHKT---------------VTSLCLASGGKRLISASLD 209 (239)
Q Consensus 160 ----~~~~-----------~~~~~i~~~d~~~~~~~~~~~~~h~~~---------------v~~~~~s~~~~~l~s~s~d 209 (239)
+..+ .+.+.+++||++...+++..+.+|... +..++|+|++++|++|+.|
T Consensus 284 ~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d 363 (447)
T 3dw8_B 284 IISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN 363 (447)
T ss_dssp HTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST
T ss_pred cCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC
Confidence 1111 122569999998767788888888642 2348999999999999999
Q ss_pred ceEEEEEccCCeeeE
Q psy11036 210 HHAKIYEMVNFSPVH 224 (239)
Q Consensus 210 ~~i~iwd~~~~~~~~ 224 (239)
|.|++||+.+++.+.
T Consensus 364 g~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 364 NFFRMFDRNTKRDIT 378 (447)
T ss_dssp TEEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCccee
Confidence 999999999988764
No 66
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-31 Score=206.07 Aligned_cols=196 Identities=16% Similarity=0.169 Sum_probs=161.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----ceeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD----PVMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~----~~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~ 114 (239)
+.|++++|+| ++++|++|+.||.|++||+.++. ....+ .|...|.+++|+| ++.++++++ |+.|++||++.
T Consensus 12 ~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred cceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 9999999999 89999999999999999998764 33444 6899999999999 589999888 89999999983
Q ss_pred CC--------eEEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcc-cceEee---------------------
Q psy11036 115 GG--------KLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMT-LKTVSS--------------------- 162 (239)
Q Consensus 115 ~~--------~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~-~~~~~~--------------------- 162 (239)
.. +.+..+..|...|.+++|+|+ +.+|++++.|+.|++||++ .+.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 22 667888899999999999999 9999999999999999987 332111
Q ss_pred -----------------eecceeEEEEEccCCC-EEEEEEecccCcEEEEEEccCC----CeEEEEcCCceEEEEEccCC
Q psy11036 163 -----------------FTGGLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLASGG----KRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 163 -----------------~~~~~~i~~~d~~~~~-~~~~~~~~h~~~v~~~~~s~~~----~~l~s~s~d~~i~iwd~~~~ 220 (239)
...++.+.+|+..... ..+..+.+|...|.+++|+|++ ++|++++.||.|++||+.++
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 1223335555544432 3467778899999999999998 89999999999999999875
Q ss_pred ----------------------------------------------eeeEEec-CCCCeeeeEecC
Q psy11036 221 ----------------------------------------------SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 221 ----------------------------------------------~~~~~~~-~~~~v~~~~~sp 239 (239)
+++..+. |...|++++|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 5666666 788999999987
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=214.67 Aligned_cols=204 Identities=18% Similarity=0.217 Sum_probs=170.8
Q ss_pred CCCCEEEEeeCC--CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCC--cee
Q psy11036 5 LPILIVALWDIP--SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPD--PVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~--~~~ 79 (239)
+.||.|++||+. +++.+..+.+|. ..|++++|++. ++++|++++.||.|++||+.+++ ...
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 30 SSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCS--------------SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred ECCCcEEEEecCCCcceeeeEecCCC--------------CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEee
Confidence 368999999997 567778899998 99999999872 28999999999999999999886 444
Q ss_pred ee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCC-eEEEEEeccCCceEEEEEcC-------------CCCEE
Q psy11036 80 SV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLAS-------------GGKRL 141 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~-~~~~~~~~~~~~i~~i~~~~-------------~~~~l 141 (239)
.+ .|...|.+++|+|+ +.++++++ |+.|++||++... .....+..|...|.+++|+| ++.++
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 55 58899999999999 88999888 8999999998432 34556778999999999999 69999
Q ss_pred EEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC---CCeEEEEcCCceEEEEEc
Q psy11036 142 ISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG---GKRLISASLDHHAKIYEM 217 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~i~iwd~ 217 (239)
++++.|+.|++||++ ... .......+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 176 ~~~~~dg~i~i~d~~~~~~-----------------~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQ-----------------TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp EEEETTSCEEEEEEETTTT-----------------EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EEEeCCCeEEEEEecCCCc-----------------ceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 999999999999987 111 12345667889999999999999 899999999999999999
Q ss_pred cCCe---eeEEe---cCCCCeeeeEecC
Q psy11036 218 VNFS---PVHTL---DYPSPVLSIDVSM 239 (239)
Q Consensus 218 ~~~~---~~~~~---~~~~~v~~~~~sp 239 (239)
.+++ ....+ .+...|.+++|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSL 266 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECS
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcC
Confidence 8864 12222 2778999999987
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.8e-32 Score=211.05 Aligned_cols=189 Identities=13% Similarity=0.162 Sum_probs=160.8
Q ss_pred CCCCEEEEeeCCCcceeeeee--CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFT--NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.||.|++||+.+++....+. +|. ..|.+++|+|+++++|++++.|+.|++||+.+ .....+
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~ 157 (383)
T 3ei3_B 93 SKGGDIILWDYDVQNKTSFIQGMGPG--------------DAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFA 157 (383)
T ss_dssp EBTSCEEEEETTSTTCEEEECCCSTT--------------CBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEE
T ss_pred cCCCeEEEEeCCCcccceeeecCCcC--------------CceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEe
Confidence 368999999999888777765 577 99999999996678999999999999999986 444444
Q ss_pred c---CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcc
Q psy11036 82 N---HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMT 156 (239)
Q Consensus 82 ~---~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~ 156 (239)
. +...|.+++|+|+++++++++ |+.|++||++ ++.+..+..|...|.+++|+|+++ ++++++.|+.|++||++
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 3 447899999999999999998 7999999994 678888999999999999999998 99999999999999998
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.. .....++..+ +|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 236 ~~----------------~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 236 NI----------------KDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp GC----------------CSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CC----------------CcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 10 0013444444 6899999999999 99999999999999999999887766554
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9e-32 Score=212.10 Aligned_cols=214 Identities=21% Similarity=0.284 Sum_probs=169.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~-~ 82 (239)
+.||.|++||+.+++.+..+..|. ..|.+++|+ ++++++++.||.|++||++. ......+ .
T Consensus 153 ~~dg~i~iwd~~~~~~~~~~~~~~--------------~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 153 LGNGLVDIYDVESQTKLRTMAGHQ--------------ARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred CCCCeEEEEECcCCeEEEEecCCC--------------CceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence 358999999999999999999998 999999995 46999999999999999984 4555555 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEe--cCCeEEEEEcc-c
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISAS--LDHHAKIYEMT-L 157 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~--~d~~i~i~d~~-~ 157 (239)
|...|.+++|+|++.++++++ |+.|++||++ ..+....+..|...|.+++|+|++. .+++++ .|+.|++||++ +
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR-SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETT-CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC-CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 999999999999999999998 7999999999 7888888989999999999999775 555554 79999999998 5
Q ss_pred ceEeee---------------------ec--ceeEEEEEccCCC-EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEE
Q psy11036 158 KTVSSF---------------------TG--GLDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 158 ~~~~~~---------------------~~--~~~i~~~d~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
+.+..+ .| ++.+.+||+.+.. .....+.+|...|.+++|+|++++|++++.||.|+
T Consensus 295 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~ 374 (401)
T 4aez_A 295 ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK 374 (401)
T ss_dssp CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEE
T ss_pred CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 544443 12 5679999998742 33445778999999999999999999999999999
Q ss_pred EEEccCCeeeEEec--CCCCeeeeE
Q psy11036 214 IYEMVNFSPVHTLD--YPSPVLSID 236 (239)
Q Consensus 214 iwd~~~~~~~~~~~--~~~~v~~~~ 236 (239)
+|++.+++.+.... ...+..++.
T Consensus 375 iw~~~~~~~~~~~~~~~~~~~~~i~ 399 (401)
T 4aez_A 375 FWRVYDGDHVKRPIPITKTPSSSIT 399 (401)
T ss_dssp EEECCC-------------------
T ss_pred EEECCCCccccccccccCCCcccee
Confidence 99999998877654 333444443
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-32 Score=213.02 Aligned_cols=225 Identities=12% Similarity=0.206 Sum_probs=177.6
Q ss_pred CCCCEEEEeeC----CCcc------eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 5 LPILIVALWDI----PSEA------QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 5 ~~dg~i~vwd~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
+.||.|++||+ .+++ ....+...... ......+.+.|++++|+| ++++|++++.||.|++|| .+
T Consensus 65 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~ 138 (425)
T 1r5m_A 65 EKNSVARLARIVETDQEGKKYWKLTIIAELRHPFAL----SASSGKTTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KT 138 (425)
T ss_dssp ETBTEEEEEEEEEC------CEEEEEEEEEECCCCC----C------CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TT
T ss_pred cCCceEEEEEEecccCCccccccccccccccccccc----cccccCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CC
Confidence 45799999999 8887 44444431000 000001127999999999 899999999999999999 56
Q ss_pred CCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCc---------------eEEEEEcCC
Q psy11036 75 PDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT---------------VTSLCLASG 137 (239)
Q Consensus 75 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~---------------i~~i~~~~~ 137 (239)
++....+ .|...|.+++|+|+++++++++ ++.|++||++ .++.+..+..+... +.+++|+|+
T Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 139 GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI-SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT-TTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC-CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 7777777 6899999999999999999888 7999999998 78888888877776 999999987
Q ss_pred CCEEEEEecCCeEEEEEcc-cceEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 138 GKRLISASLDHHAKIYEMT-LKTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 138 ~~~l~~~~~d~~i~i~d~~-~~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
+ .+++++.|+.|++||++ .+.+..+ ..++.+++||+.+ .+.+..+..|...|.++
T Consensus 218 ~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 218 D-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp T-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEE
T ss_pred C-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecCCCccEEEE
Confidence 5 58899999999999987 3332222 2345699999886 56677788899999999
Q ss_pred EEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+|+|++ +|++++.|+.|++||+.+++.+..+. +..++.+++|+|
T Consensus 296 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 999999 99999999999999999999999888 688999999987
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.2e-32 Score=211.90 Aligned_cols=207 Identities=22% Similarity=0.311 Sum_probs=170.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~- 81 (239)
+.||.|++||+.+++....+.. . ..+.+++++|.+ +.++++++.|+.|++||+++++....+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNF-E--------------ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC-S--------------SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred eCCCeEEEeeCCCCccceeccC-C--------------CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 4689999999999998888774 4 789999999842 349999999999999999999888888
Q ss_pred cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEE---------------eccCCceEEEEEcCCCCEEEEE
Q psy11036 82 NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKF---------------TCHHKTVTSLCLASGGKRLISA 144 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~---------------~~~~~~i~~i~~~~~~~~l~~~ 144 (239)
.|...|.+++|+|++. ++++++ |+.|++||++.....+..+ ..|...|.+++|+|++++|+++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 5899999999999998 477776 8999999998544455554 5688999999999999999999
Q ss_pred ecCCeEEEEEcc-cceEee---------------------------eecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 145 SLDHHAKIYEMT-LKTVSS---------------------------FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 145 ~~d~~i~i~d~~-~~~~~~---------------------------~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
+.|+.|++||++ ++.... ...++.+++||+.+ .+++..+.+|...|.+++|
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS-GEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT-CCEEEEECCCSSCEEEEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC-CcceeeeccCCCeEEEEEE
Confidence 999999999998 332211 13456699999987 7788889999999999999
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+|++++|++++.||.|++||+.+++++....
T Consensus 343 s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 343 QSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp ETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 9999999999999999999999998876554
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.8e-31 Score=212.87 Aligned_cols=216 Identities=21% Similarity=0.309 Sum_probs=182.5
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCce----
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPV---- 78 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~~~---- 78 (239)
.+.||.|++||+++++.+..+.+|. +.|.+++|++. ++.++++|+.|++|++||+++++..
T Consensus 179 ~s~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKGCCTHVFEGHN--------------STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC----
T ss_pred EeCCCCEEEEECCCCcEEEEECCCC--------------CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccc
Confidence 3678999999999999999999998 99999999952 5689999999999999999877532
Q ss_pred -------------------eee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCC
Q psy11036 79 -------------------MSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 137 (239)
Q Consensus 79 -------------------~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~ 137 (239)
..+ .|...+.++ ++++.++++++ |+.|++||++ .++.+..+.+|...|.+++|+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVA-QMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEETT
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECC-CCcEEEEecCCCCCEEEEEEcCC
Confidence 223 577777776 56788999888 8999999999 88899999999999999999999
Q ss_pred CCEEEEEecCCeEEEEEcc-cceEeee--------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 138 GKRLISASLDHHAKIYEMT-LKTVSSF--------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 138 ~~~l~~~~~d~~i~i~d~~-~~~~~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
++++++++.|+.|++||++ ++.+..+ ..++.+++||+.+..... .. .|...+..++|
T Consensus 322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~-~~~~~~~~~~~ 399 (464)
T 3v7d_B 322 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKF-SY-HHTNLSAITTF 399 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-EE-ECTTCCCEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceee-ee-cCCCCccEEEE
Confidence 9999999999999999998 6655554 235569999998754333 33 35667888899
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
+|++++|++++ ||.|++||+++++.+..+. +...|.+++|++
T Consensus 400 ~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~ 443 (464)
T 3v7d_B 400 YVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG 443 (464)
T ss_dssp EECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEET
T ss_pred EeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecC
Confidence 99999999998 8999999999999998733 778999999863
No 73
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4e-33 Score=222.05 Aligned_cols=189 Identities=19% Similarity=0.214 Sum_probs=156.2
Q ss_pred CCCCEEEEeeCCCccee--eeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPSEAQV--STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+.||.|+|||+.+++.. ..+.+|. +.|++++|+|.++++|++|+.||+|++||++++.......
T Consensus 139 s~dg~i~lWd~~~~~~~~~~~~~gH~--------------~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 139 SKGGDIMLWNFGIKDKPTFIKGIGAG--------------GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp ETTSCEEEECSSCCSCCEEECCCSSS--------------CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC
T ss_pred eCCCEEEEEECCCCCceeEEEccCCC--------------CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec
Confidence 46899999999876543 4456788 9999999999778999999999999999998664433332
Q ss_pred ---CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcc-
Q psy11036 83 ---HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMT- 156 (239)
Q Consensus 83 ---~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~- 156 (239)
+...+.+++|+|++.++++++ ||.|++||++ ++.+..+.+|...|.+++|+|++. ++++++.|+.|++||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 345678999999999999999 7999999996 456677889999999999999886 78899999999999998
Q ss_pred cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 157 LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 157 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.. .......+|...|.+++|+|+|++|++++.||.|++||+.+++....+.
T Consensus 283 ~~~~------------------~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 283 VRGK------------------ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp CCSS------------------SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred cccc------------------ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 2211 1122235789999999999999999999999999999999988766654
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-32 Score=212.41 Aligned_cols=198 Identities=13% Similarity=0.206 Sum_probs=166.6
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.||.|++||+.+++.+..+.+|. ..|.+++|+|.++++|++++.||.|++||+++++....+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHG--------------NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCC--------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred cCCCEEEEEEchhceEeeeecCCC--------------CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 568999999999999999999998 999999999967899999999999999999999888876
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE----------------------------EEEeccCCceEE
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL----------------------------HKFTCHHKTVTS 131 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~----------------------------~~~~~~~~~i~~ 131 (239)
.|...|.+++|+|++.++++++ |+.|++||++ .++.. .....|...|.+
T Consensus 158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN-SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC-SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred ccccCceeEEEECCCCCEEEEecCCCCEEEEECC-CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 5889999999999999999998 8999999997 33322 223348999999
Q ss_pred EEEcCCCCEEEEEecCCeEEEEEcc-cce--------------Eeee------------------------ecceeEEEE
Q psy11036 132 LCLASGGKRLISASLDHHAKIYEMT-LKT--------------VSSF------------------------TGGLDVCIW 172 (239)
Q Consensus 132 i~~~~~~~~l~~~~~d~~i~i~d~~-~~~--------------~~~~------------------------~~~~~i~~~ 172 (239)
++|+ ++++++++.|+.|++||++ ... +..+ ..++.|++|
T Consensus 237 ~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 237 VRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp EEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred EEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 9998 7799999999999999987 221 2111 234569999
Q ss_pred EccCCC---EEEEEEecc--cCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 173 DMLGGG---KLLHKFTCH--HKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 173 d~~~~~---~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
|+.+.. .....+..| ...|.+++|+|++++|++++.||.|++||+.+
T Consensus 315 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 315 DLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 998743 255577777 78999999999999999999999999999853
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-32 Score=215.47 Aligned_cols=205 Identities=15% Similarity=0.225 Sum_probs=163.9
Q ss_pred CCCCCEEEEeeCCC---cc---eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC---C
Q psy11036 4 DLPILIVALWDIPS---EA---QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR---S 74 (239)
Q Consensus 4 ~~~dg~i~vwd~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~---~ 74 (239)
.+.||.|+|||+.+ +. ....+ .|. ..|++++|+| ++++|++++.||.|++||+. +
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~--------------~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~ 145 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTY-DCS--------------STVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQ 145 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEE-ECS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEE
T ss_pred ecCCceEEEeECcccccCcccceeeec-cCC--------------CCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccC
Confidence 35789999999876 33 22222 366 8999999999 89999999999999999994 4
Q ss_pred CCceeeec-------------CCCCEEEEE--EecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec--cCCceEEEEEcC
Q psy11036 75 PDPVMSVN-------------HGSPVESVL--CLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLAS 136 (239)
Q Consensus 75 ~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~i~~i~~~~ 136 (239)
++....+. +...+.++. +++++.++++++ |+.|++||++ .++.+..+.. |...|++++|+|
T Consensus 146 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~~~~s~ 224 (437)
T 3gre_A 146 ESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR-TLERLQIIENSPRHGAVSSICIDE 224 (437)
T ss_dssp TTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT-TCCEEEEEECCGGGCCEEEEEECT
T ss_pred CceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCeeeEEEccCCCCCceEEEEECC
Confidence 54433221 456677777 557889999988 7999999998 7888888887 899999999999
Q ss_pred CCCEEEEEecCCeEEEEEcc-cceEeee---------------------------ecceeEEEEEccCCCEEEEEEec--
Q psy11036 137 GGKRLISASLDHHAKIYEMT-LKTVSSF---------------------------TGGLDVCIWDMLGGGKLLHKFTC-- 186 (239)
Q Consensus 137 ~~~~l~~~~~d~~i~i~d~~-~~~~~~~---------------------------~~~~~i~~~d~~~~~~~~~~~~~-- 186 (239)
++++|++++.||.|++||++ ++.+..+ ..++.|++||+++ ++.+..+.+
T Consensus 225 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~ 303 (437)
T 3gre_A 225 ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQYAFINSD 303 (437)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT-TEEEEEEESSS
T ss_pred CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC-CcEEEEEEcCC
Confidence 99999999999999999998 4444432 1245599999986 555555553
Q ss_pred ------------------------ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 187 ------------------------HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 187 ------------------------h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
|...|.+++|+ ++++|++|+.|+.|++||+.+++.+..+.
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 304 EQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp SCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred CCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 55668889998 77999999999999999999988776665
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-31 Score=213.61 Aligned_cols=210 Identities=23% Similarity=0.370 Sum_probs=181.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~ 83 (239)
+.||.|++||+.+++....+.+|. +.|.+++| ++++|++|+.||+|++||+.+++.+..+ .|
T Consensus 150 ~~dg~i~iwd~~~~~~~~~~~~h~--------------~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 150 LRDNTIKIWDKNTLECKRILTGHT--------------GSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp ESSSCEEEEESSSCCEEEEECCCS--------------SCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCC
T ss_pred eCCCeEEEEeCCCCeEEEEEcCCC--------------CcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC
Confidence 578999999999999999999998 99999998 4689999999999999999999988888 68
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
...|.+++|++ ..+++++ |+.|++||++.... ....+.+|...|.+++| +++++++++.|+.|++||++ ++.
T Consensus 213 ~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 213 CEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 99999999974 4777777 89999999983322 22677889999999999 78899999999999999998 555
Q ss_pred Eeee--------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 160 VSSF--------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 160 ~~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+..+ ..++.|++||+++ ++++..+.+|...|.+++| ++++|++|+.||.|++||+.+
T Consensus 289 ~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHH
T ss_pred EEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCC-CCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCC
Confidence 5544 2345699999987 6788889999999999998 788999999999999999977
Q ss_pred Ce---------eeEEec-CCCCeeeeEec
Q psy11036 220 FS---------PVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 220 ~~---------~~~~~~-~~~~v~~~~~s 238 (239)
++ ++..+. |.++|.+++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 394 (435)
T 1p22_A 366 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD 394 (435)
T ss_dssp HTSTTSCTTTTEEEEECCCSSCCCCEEEC
T ss_pred CCCccccccchheeeccCCCCCeEEEEeC
Confidence 65 677776 88899999884
No 77
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-31 Score=205.57 Aligned_cols=174 Identities=20% Similarity=0.391 Sum_probs=156.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee---e---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS---V---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~---~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~ 115 (239)
+.|++++|+| ++++|++++ ||.|++||+.+++.... + .+...+.+++|+|+++++++++ ++.|++||++ .
T Consensus 52 ~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~ 128 (337)
T 1gxr_A 52 EVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA-A 128 (337)
T ss_dssp SCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC-C
T ss_pred CceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC-C
Confidence 8999999999 899999998 99999999987653322 2 5788999999999999999888 7999999998 4
Q ss_pred Ce--EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 116 GK--LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 116 ~~--~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
++ ....+..|...|.+++|+|+++++++++.|+.|++||++ ..+....+..|...|.+
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~--------------------~~~~~~~~~~~~~~i~~ 188 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--------------------NQTLVRQFQGHTDGASC 188 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT--------------------TTEEEEEECCCSSCEEE
T ss_pred CCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC--------------------CCceeeeeecccCceEE
Confidence 44 566778899999999999999999999999999999988 46677777889999999
Q ss_pred EEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 194 LCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 194 ~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
++|+|++++|++++.||.|++||+++++.+..+.+..++.+++|+|
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~ 234 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP 234 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECT
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999987
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-31 Score=208.49 Aligned_cols=190 Identities=13% Similarity=0.140 Sum_probs=165.5
Q ss_pred EeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCCceeee---cCCCCE
Q psy11036 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSS-DIVISGSYDKTVNVYDTRSPDPVMSV---NHGSPV 87 (239)
Q Consensus 12 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~---~~~~~v 87 (239)
+|++.+.+....+.+|. ..|++++|+| ++ ++|++|+.||.|++||+.+++....+ .|...|
T Consensus 57 ~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v 121 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFD--------------RRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAI 121 (383)
T ss_dssp HHHHTTCEEEEEECCCS--------------SCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBE
T ss_pred cccccccceEEeccCCC--------------CCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCce
Confidence 34455666777888888 9999999999 55 89999999999999999988877665 489999
Q ss_pred EEEEEec-CCcEEEEeC-CCcEEEEEccCCCeEEEEEecc---CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 88 ESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCH---HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 88 ~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~---~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
.+++|+| ++.++++++ |+.|++||++ . ..+..+..+ ...|.+++|+|++++|++++.|+.|++||++
T Consensus 122 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------ 193 (383)
T 3ei3_B 122 TGMKFNQFNTNQLFVSSIRGATTLRDFS-G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------ 193 (383)
T ss_dssp EEEEEETTEEEEEEEEETTTEEEEEETT-S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------
T ss_pred eEEEeCCCCCCEEEEEeCCCEEEEEECC-C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------
Confidence 9999999 678888888 8999999997 3 555556544 4789999999999999999999999999987
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccC----CeeeEEecCCCCeeeeEe
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVN----FSPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~----~~~~~~~~~~~~v~~~~~ 237 (239)
.+++..+.+|...|.+++|+|+++ +|++++.|+.|++||+.+ ++++..+.+...|.+++|
T Consensus 194 ---------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 258 (383)
T 3ei3_B 194 ---------------GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYF 258 (383)
T ss_dssp ---------------SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEE
T ss_pred ---------------CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEE
Confidence 556667789999999999999999 899999999999999998 778888889999999999
Q ss_pred cC
Q psy11036 238 SM 239 (239)
Q Consensus 238 sp 239 (239)
+|
T Consensus 259 s~ 260 (383)
T 3ei3_B 259 NP 260 (383)
T ss_dssp CT
T ss_pred cC
Confidence 87
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.8e-32 Score=214.35 Aligned_cols=202 Identities=16% Similarity=0.208 Sum_probs=169.2
Q ss_pred CCCCEEEEeeCCC----------cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC
Q psy11036 5 LPILIVALWDIPS----------EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS 74 (239)
Q Consensus 5 ~~dg~i~vwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~ 74 (239)
+.+|.|++||+.+ .+++..+.+|. ..|++++|+|.+..+|++|+.||.|++|++.+
T Consensus 148 ~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 148 TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ--------------KEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS--------------SCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred CCCCcEEEEECCCcccccCccccCCCcEEecCCC--------------CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 5689999999976 56777888888 99999999994334999999999999999987
Q ss_pred CCc-------eeee-cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCC--eEEEEEeccCCceEEEEEcCCCC-EE
Q psy11036 75 PDP-------VMSV-NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGG--KLLHKFTCHHKTVTSLCLASGGK-RL 141 (239)
Q Consensus 75 ~~~-------~~~~-~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~i~~i~~~~~~~-~l 141 (239)
+.. ...+ .|...|.+++|+| ++.++++++ ++.|++||++... +.+..+..|...|++++|+|++. .+
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEE
Confidence 432 2333 6889999999999 677888877 7999999998432 56777889999999999999987 68
Q ss_pred EEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccC-
Q psy11036 142 ISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVN- 219 (239)
Q Consensus 142 ~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~- 219 (239)
++|+.||.|++||++ +...++..+..|...|.+++|+|+++ +|++++.|+.|++||+..
T Consensus 294 ~tg~~dg~v~vwd~~-------------------~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 294 ATGSADKTVALWDLR-------------------NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEETTSEEEEEETT-------------------CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred EEEeCCCeEEEEeCC-------------------CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 899999999999988 12455667788999999999999985 689999999999999987
Q ss_pred -------------CeeeEEec-CCCCeeeeEecC
Q psy11036 220 -------------FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 220 -------------~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+.+..+. |...|++++|+|
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 25556655 677899999987
No 80
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=206.57 Aligned_cols=204 Identities=12% Similarity=0.234 Sum_probs=174.1
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCce-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD-----KTVNVYDTRSPDPV- 78 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~vw~~~~~~~~- 78 (239)
+.||.|++||+.+++.+..+. +. ..|.+++|+| +++++++++.+ +.|++||+......
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~-~~--------------~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWK-SP--------------VPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEE-CS--------------SCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred eCCCeEEEEECCCCcEEEEee-cC--------------CCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 468999999999999988888 55 8899999999 89999999998 99999999766432
Q ss_pred ----------eee-cCCC--CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE
Q psy11036 79 ----------MSV-NHGS--PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 144 (239)
Q Consensus 79 ----------~~~-~~~~--~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~ 144 (239)
..+ .+.. .+.+++|+|+++.+++++ ++.|++||++...+.+..+..|...|.+++|+|++++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS 236 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe
Confidence 222 3444 899999999999999988 79999999994478899999999999999999999999999
Q ss_pred ecCCeEEEEEcc-cceEeeee---------------------cce--------------eEEEEEccCCCEEEEEEeccc
Q psy11036 145 SLDHHAKIYEMT-LKTVSSFT---------------------GGL--------------DVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 145 ~~d~~i~i~d~~-~~~~~~~~---------------------~~~--------------~i~~~d~~~~~~~~~~~~~h~ 188 (239)
+.|+.|++||++ .+.+..+. +.. .+.+||..+ .+++..+.+|.
T Consensus 237 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~ 315 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHF 315 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCS
T ss_pred cCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-Ccchhheeccc
Confidence 999999999998 55544431 111 689999877 67778889999
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
..|.+++|+|++++|++++.||.|++|++.++.....
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCC
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhH
Confidence 9999999999999999999999999999987654443
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-32 Score=214.81 Aligned_cols=202 Identities=15% Similarity=0.251 Sum_probs=171.4
Q ss_pred CCCCEEEEeeCCC----cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----
Q psy11036 5 LPILIVALWDIPS----EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD---- 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---- 76 (239)
+.||.|++||+.+ .+.+..+..|. ..|.+++|+|+++++|++++.|+.|++||+.+++
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARFSNHS--------------SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEECCCSS--------------SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred ccCCeEEEeecccccccccchhhccCCc--------------cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc
Confidence 3689999999987 45788888998 9999999999448999999999999999999876
Q ss_pred --ceeee----cCCCCEEEEEEecC-CcEEEEeC-CCcEEEEEccCCCeEEEEEecc------CCceEEEEEcCCC-CEE
Q psy11036 77 --PVMSV----NHGSPVESVLCLPS-GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCH------HKTVTSLCLASGG-KRL 141 (239)
Q Consensus 77 --~~~~~----~~~~~v~~~~~~~~-~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~------~~~i~~i~~~~~~-~~l 141 (239)
....+ .|...|.+++|+|+ +.++++++ ++.|++||++ .++.+..+..+ ...|.+++|+|++ .++
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK-AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT-TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC-CCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence 33322 58889999999998 78888888 7999999998 78888888776 7899999999997 689
Q ss_pred EEEecCC---eEEEEEcc-c-ceEeee------------------------ecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 142 ISASLDH---HAKIYEMT-L-KTVSSF------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 142 ~~~~~d~---~i~i~d~~-~-~~~~~~------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
++++.|+ .|++||++ . ..+..+ ..++.+++||+.+ .+++..+.+|...|.
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~ 309 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCF 309 (416)
T ss_dssp EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCC
T ss_pred EEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceE
Confidence 9999998 99999997 2 222221 1244599999987 677888999999999
Q ss_pred EEEEccCC-CeEEEEcCCceEEEEEccCCee
Q psy11036 193 SLCLASGG-KRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 193 ~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
+++|+|++ ++|++++.|+.|++||+.+++.
T Consensus 310 ~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 310 KTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred EEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999998 8999999999999999987654
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.3e-30 Score=208.10 Aligned_cols=211 Identities=22% Similarity=0.387 Sum_probs=185.3
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~ 82 (239)
.+.||.|++||+.+++.+..+.+|. +.|.+++|++ +++++|+.||+|++||+.+++....+ .
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHT--------------GGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCS--------------SCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EECCCcEEEEECCCCcEEEEEcCCC--------------CCEEEEEecC---CEEEEEeCCCeEEEEECCcCcEEEEECC
Confidence 4578999999999999999999999 9999999974 69999999999999999999888888 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
|...|.+++++ +..+++++ |+.|++||++ .++.+..+.+|...|.++++ +++++++++.|+.|++||++ ++.+
T Consensus 198 h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 198 HTSTVRCMHLH--EKRVVSGSRDATLRVWDIE-TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEESS-SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CCCcEEEEEec--CCEEEEEeCCCEEEEEECC-CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEe
Confidence 89999999996 45677777 8999999998 78888899999999999999 78899999999999999998 5555
Q ss_pred eee--------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 161 SSF--------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 161 ~~~--------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
..+ ..++.+++||+++ ++.+..+.+|...+.++.++ +++|++++.||.|++||+.++
T Consensus 273 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 273 HTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred EEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC
Confidence 444 2345699999987 67778889999999988774 679999999999999999999
Q ss_pred eeeEEec----CCCCeeeeEecC
Q psy11036 221 SPVHTLD----YPSPVLSIDVSM 239 (239)
Q Consensus 221 ~~~~~~~----~~~~v~~~~~sp 239 (239)
+++..+. +..+|.+++|++
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEECS
T ss_pred cEEEEEccCCCCCCCEEEEEECC
Confidence 9999887 667899999864
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-33 Score=225.91 Aligned_cols=197 Identities=13% Similarity=0.079 Sum_probs=155.9
Q ss_pred CCCCEEEEeeCCCcce-----------eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q psy11036 5 LPILIVALWDIPSEAQ-----------VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 73 (239)
+.||+|+|||+.+++. ..++.+|. ..|++++|++ + ..|++|+.||+|++||++
T Consensus 232 s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~--------------~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~ 295 (524)
T 2j04_B 232 SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD--------------SLITTFDFLS-P-TTVVCGFKNGFVAEFDLT 295 (524)
T ss_dssp ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT--------------TCEEEEEESS-S-SEEEEEETTSEEEEEETT
T ss_pred ecCCeEEEEEcCCCccccccceeecCceEEEEcCC--------------CCEEEEEecC-C-CeEEEEeCCCEEEEEECC
Confidence 4689999999987642 23556666 9999999998 4 489999999999999998
Q ss_pred CCC-ceeee-cCCCCEEEE--EEecCC-cEEEEeC-CCcEEEEEccCCCeEEEEEeccCC--ceEEEEEcCCCCEEEEEe
Q psy11036 74 SPD-PVMSV-NHGSPVESV--LCLPSG-GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK--TVTSLCLASGGKRLISAS 145 (239)
Q Consensus 74 ~~~-~~~~~-~~~~~v~~~--~~~~~~-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~ 145 (239)
++. +...+ .|...|.++ +|+|++ .+|++++ |++|++||++ ..+....+.+|.. .|.+++|+|+++.+++++
T Consensus 296 ~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~-~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~ 374 (524)
T 2j04_B 296 DPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK-DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD 374 (524)
T ss_dssp BCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG-GHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC
T ss_pred CCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC-CCCcccccccccccCcccceEeCCCcCeEEEeC
Confidence 764 33445 699999999 567887 8888888 8999999998 5555555666653 578999999999999999
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
.|++|++||++ ...++..+.+|...|.+++|+|++++|++|+.||+|++||+..+ .+..
T Consensus 375 ~d~tv~lwd~~--------------------~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~ 433 (524)
T 2j04_B 375 GASSLRAVPSR--------------------AAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHG 433 (524)
T ss_dssp SSSEEEEEETT--------------------CTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTC
T ss_pred CCCcEEEEECc--------------------ccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccc
Confidence 99999999988 34444556789999999999999999999999999999998543 2222
Q ss_pred ec------CCCCeeeeEecC
Q psy11036 226 LD------YPSPVLSIDVSM 239 (239)
Q Consensus 226 ~~------~~~~v~~~~~sp 239 (239)
.. ....+.+++|+|
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp 453 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSI 453 (524)
T ss_dssp C------CCCCEEEECBCCS
T ss_pred cccCccceeeeEEEEeccCC
Confidence 11 112456777765
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.4e-31 Score=208.09 Aligned_cols=199 Identities=14% Similarity=0.099 Sum_probs=168.3
Q ss_pred CCCCEEEEeeCCCcce-----eeeeeCC-----ceeeccceeeccCCCCCeEEEEEe----cCCCCE-EEEeeCCCeEEE
Q psy11036 5 LPILIVALWDIPSEAQ-----VSTFTNH-----TTIYKVPLMLYSTPQDYVRAGTVS----PVSSDI-VISGSYDKTVNV 69 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~-l~s~~~dg~v~v 69 (239)
+.||.|++||+.+++. ...+..| . ..|.+++|+ | ++++ |++++.||.|++
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~i 152 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKK--------------HSFWALKWGASNDR-LLSHRLVATDVKGTTYI 152 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGG--------------SCEEEEEEECCC-----CEEEEEEETTSCEEE
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCC--------------CcEEEEEEeeccCC-CCceEEEEEeCCCcEEE
Confidence 4689999999988886 7888887 5 889999999 8 7888 999999999999
Q ss_pred EeCCC------CCcee-----ee--------cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec---c-
Q psy11036 70 YDTRS------PDPVM-----SV--------NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC---H- 125 (239)
Q Consensus 70 w~~~~------~~~~~-----~~--------~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~---~- 125 (239)
||+.+ ++.+. .+ .|...+.+++|+|++ .+++++ ++.|++||++ ..+.+..+.. |
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS-TLRPLYNFESQHSMI 230 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT-TTEEEEEEECCC---
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC-CCceeEEEecccccc
Confidence 99988 65554 44 268899999999999 888888 7999999998 7888999998 8
Q ss_pred --CCceEEEEEcCCCCEEEEEecC---CeEEEEEcc-cceEeee-----------------------------------e
Q psy11036 126 --HKTVTSLCLASGGKRLISASLD---HHAKIYEMT-LKTVSSF-----------------------------------T 164 (239)
Q Consensus 126 --~~~i~~i~~~~~~~~l~~~~~d---~~i~i~d~~-~~~~~~~-----------------------------------~ 164 (239)
...|.+++|+|++++|++++.| +.|++||++ .+.+..+ .
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred ccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 9999999999999999999999 999999997 4433332 1
Q ss_pred cceeEEEEEccCCCEEEEEEe------cc---------------cCcEEEEEEccCC----------CeEEEEcCCceEE
Q psy11036 165 GGLDVCIWDMLGGGKLLHKFT------CH---------------HKTVTSLCLASGG----------KRLISASLDHHAK 213 (239)
Q Consensus 165 ~~~~i~~~d~~~~~~~~~~~~------~h---------------~~~v~~~~~s~~~----------~~l~s~s~d~~i~ 213 (239)
.++.|++||+.+ .+++..+. +| ...|.+++|+|++ ++|++++.||.|+
T Consensus 311 ~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 311 WDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred CCCeEEEEEcCC-CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 244599999987 67888888 77 9999999999998 7999999999999
Q ss_pred EEEccCCe
Q psy11036 214 IYEMVNFS 221 (239)
Q Consensus 214 iwd~~~~~ 221 (239)
+|++.+|+
T Consensus 390 iw~~~~g~ 397 (397)
T 1sq9_A 390 WFREAGGK 397 (397)
T ss_dssp EEEEEC--
T ss_pred EEEcCCCC
Confidence 99998864
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.1e-31 Score=204.00 Aligned_cols=201 Identities=19% Similarity=0.256 Sum_probs=163.7
Q ss_pred CCCCEEEEeeCCCcc-eeeeeeCCceeeccceeeccCCCCCeEEEEE------ecCCCCEEEEeeCCCeEEEEeCCCCC-
Q psy11036 5 LPILIVALWDIPSEA-QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV------SPVSSDIVISGSYDKTVNVYDTRSPD- 76 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~l~s~~~dg~v~vw~~~~~~- 76 (239)
+.||.|++||+.+++ .+..+.+|. ..|.+++| +| ++++|++++.||.|++||+++++
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~ 151 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHK--------------EIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDD 151 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCS--------------SCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSS
T ss_pred cCCCeEEEEeCCCCCccEEEEEecc--------------cceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCC
Confidence 458999999999888 888999998 99999965 56 78899999999999999999886
Q ss_pred ceeee-cC----CCCEEEEE----EecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC---CCCEEEE
Q psy11036 77 PVMSV-NH----GSPVESVL----CLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS---GGKRLIS 143 (239)
Q Consensus 77 ~~~~~-~~----~~~v~~~~----~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~---~~~~l~~ 143 (239)
+...+ .+ ...+.+++ |+|++.++++++ ++.|++||++ ..+.. ....|...|.+++|+| ++.++++
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 152 PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR-NMALR-WETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT-TTEEE-EEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc-cCcee-eecCCCCceEEEEcCCCCCCCCEEEE
Confidence 56655 23 33889998 678999999998 7999999998 55554 3466899999999999 8999999
Q ss_pred EecCCeEEEEEcc-cceEee----------------------------eecceeEEEEEccCCC----------------
Q psy11036 144 ASLDHHAKIYEMT-LKTVSS----------------------------FTGGLDVCIWDMLGGG---------------- 178 (239)
Q Consensus 144 ~~~d~~i~i~d~~-~~~~~~----------------------------~~~~~~i~~~d~~~~~---------------- 178 (239)
++.|+.|++||++ .+.+.. ...++.+++||++...
T Consensus 230 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 230 TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccc
Confidence 9999999999987 221110 0234569999987532
Q ss_pred --EEEEEEecccCcEEEEEEccCCCeEE-EEcCCceEEEEEccCCee
Q psy11036 179 --KLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 179 --~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~i~iwd~~~~~~ 222 (239)
+.+..+.+|...|.+++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 310 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 310 SVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778899999999999999999998 899999999999987654
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.2e-31 Score=207.82 Aligned_cols=205 Identities=22% Similarity=0.356 Sum_probs=170.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eeee-c
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMSV-N 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-~~~~-~ 82 (239)
+.||.|+|||+++++.+..+.+|. ..+.+++++ +.+|++|+.|+.+++||...... +..+ .
T Consensus 166 s~Dg~v~iWd~~~~~~~~~~~~h~--------------~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~ 228 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLRNMTSHS--------------ARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSG 228 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred ECCCeEEEEEcCCCcEEEEEeCCC--------------CceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecc
Confidence 468999999999999999999998 899998885 47999999999999999987544 3444 6
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCC---eEEEEEeccCCceEEEEEcCCCC-EEEE--EecCCeEEEEEc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG---KLLHKFTCHHKTVTSLCLASGGK-RLIS--ASLDHHAKIYEM 155 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~---~~~~~~~~~~~~i~~i~~~~~~~-~l~~--~~~d~~i~i~d~ 155 (239)
|...+..+.++|++.++++++ |+.+++|+..... ..+.....|...|.+++|+|.+. .+++ |+.|+.|++||+
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 899999999999999999998 8999999997322 24567778999999999999664 5554 457999999999
Q ss_pred c-cceEeee---------------------e--cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCce
Q psy11036 156 T-LKTVSSF---------------------T--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 211 (239)
Q Consensus 156 ~-~~~~~~~---------------------~--~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~ 211 (239)
. ++.+..+ . .++.|++||..+ .+++..+.+|.+.|.+++|+|+|++|+||+.|++
T Consensus 309 ~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 309 CSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp TTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred CccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 8 5544443 2 245699999986 7788899999999999999999999999999999
Q ss_pred EEEEEccCCeeeEEec
Q psy11036 212 AKIYEMVNFSPVHTLD 227 (239)
Q Consensus 212 i~iwd~~~~~~~~~~~ 227 (239)
|+|||+....+....+
T Consensus 388 vriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 388 LRLWRCFELDPARRRE 403 (420)
T ss_dssp EEEECCSCSSCC----
T ss_pred EEEEECCCCCccchhh
Confidence 9999998776665554
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.7e-31 Score=204.63 Aligned_cols=212 Identities=11% Similarity=0.075 Sum_probs=176.0
Q ss_pred CCCCEEEEeeCCCcc---eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC-EEEEeeCCCeEEEEeC-CCCCcee
Q psy11036 5 LPILIVALWDIPSEA---QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD-IVISGSYDKTVNVYDT-RSPDPVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~-~~~~~~~ 79 (239)
+.||.|++||+.+++ ....+..|. ..|.+++|+| +++ +|++|+.||.|++||+ .+++...
T Consensus 30 ~~d~~v~iw~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 94 (342)
T 1yfq_A 30 SWDGSLTVYKFDIQAKNVDLLQSLRYK--------------HPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSFQA 94 (342)
T ss_dssp ETTSEEEEEEEETTTTEEEEEEEEECS--------------SCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSEEE
T ss_pred cCCCeEEEEEeCCCCccccceeeeecC--------------CceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCceEe
Confidence 468999999998876 345556777 8999999999 789 9999999999999999 8776644
Q ss_pred eec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCC---------CeEEEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy11036 80 SVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG---------GKLLHKFTCHHKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 80 ~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~---------~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d 147 (239)
... |...|.+++|+| +..+++++ |+.|++||++ . .+.+..+. |...|.+++|+|++ +++++.|
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR-NYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH-HHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEEST
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc-ccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCC
Confidence 446 999999999999 88888888 8999999998 4 44444444 88899999999887 9999999
Q ss_pred CeEEEEEccc---ceEee-------------e-----------ecceeEEEEEccCC-----CEEEEEEecccC------
Q psy11036 148 HHAKIYEMTL---KTVSS-------------F-----------TGGLDVCIWDMLGG-----GKLLHKFTCHHK------ 189 (239)
Q Consensus 148 ~~i~i~d~~~---~~~~~-------------~-----------~~~~~i~~~d~~~~-----~~~~~~~~~h~~------ 189 (239)
+.|++||++. ..... + ..++.+.+|++... .+....+..|..
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence 9999999874 11100 0 12345899999875 367777888865
Q ss_pred ---cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-C-CCCeeeeE
Q psy11036 190 ---TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-Y-PSPVLSID 236 (239)
Q Consensus 190 ---~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~-~~~v~~~~ 236 (239)
.|.+++|+|++++|++++.||.|++||+.+++.+..+. + ..+|.+++
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 99999999999999999999999999999999999988 5 78888876
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.6e-31 Score=206.38 Aligned_cols=209 Identities=19% Similarity=0.263 Sum_probs=158.1
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.||.|++||+.+++....+.... ...........+...|.+++|+|+++++|++++.||.|++||+.+++....+.+.
T Consensus 63 ~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 141 (408)
T 4a11_B 63 GSDGVIVLYDLENSSRQSYYTCKA-VCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE 141 (408)
T ss_dssp ETTSCEEEEECCCCSSSSCEEECE-EEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred cCCCeEEEEECCCCcccceEeccc-cccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC
Confidence 468999999999887655553100 0000000001122899999999977789999999999999999999988888888
Q ss_pred CCEEEEEEecCC---cEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcc-cc
Q psy11036 85 SPVESVLCLPSG---GIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 85 ~~v~~~~~~~~~---~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~-~~ 158 (239)
..+.++.++|.+ .++++++ ++.|++||++ .++.+..+..|...|.+++|+|++. .+++++.||.|++||++ ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 142 ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK-SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp SCEEEEEECSSCSSCCEEEEEESSSSEEEEESS-SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC-CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 999999999854 4888877 7999999998 7788888999999999999999998 58899999999999998 21
Q ss_pred -eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 159 -TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 159 -~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
.+..+..... ............|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 221 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 221 GCLITLDQHNG------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CCSEECCTTTT------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ccccccccccc------ccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 2222200000 00011111225688999999999999999999999999999987643
No 89
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-31 Score=211.83 Aligned_cols=164 Identities=18% Similarity=0.173 Sum_probs=141.8
Q ss_pred CCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCC--CCCceeee---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEcc
Q psy11036 41 PQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTR--SPDPVMSV---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDML 113 (239)
Q Consensus 41 ~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~ 113 (239)
+.+.|.+++|+| ++++| ++++.||.|++||+. +++....+ .+...|.+++|+|++++|++++ ++.+.+|++.
T Consensus 101 ~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 101 IYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 345799999999 67775 899999999999999 88877776 4678999999999999999998 7999999997
Q ss_pred CCCeE----EEEEeccCCceEEEEEcCC---CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEE-Ee
Q psy11036 114 GGGKL----LHKFTCHHKTVTSLCLASG---GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-FT 185 (239)
Q Consensus 114 ~~~~~----~~~~~~~~~~i~~i~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~ 185 (239)
.... ...+.+|...|.+++|+|+ +++|++++.|+.|++||++ ..+.+.. +.
T Consensus 180 -~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~--------------------~~~~~~~~~~ 238 (450)
T 2vdu_B 180 -SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP--------------------QCFIVDKWLF 238 (450)
T ss_dssp -SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES--------------------CTTCEEEECC
T ss_pred -CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC--------------------CCceeeeeec
Confidence 4433 2366789999999999999 9999999999999999988 2333333 45
Q ss_pred cccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 186 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+|...|.+++|+ ++++|++++.|+.|++||+.+++++..+.
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 899999999999 99999999999999999999999888875
No 90
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-30 Score=207.74 Aligned_cols=219 Identities=15% Similarity=0.072 Sum_probs=170.4
Q ss_pred CCCCCEEEEeeCC--Ccceeeeee--CCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 4 DLPILIVALWDIP--SEAQVSTFT--NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 4 ~~~dg~i~vwd~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
.+.||.|++||+. +++.+..+. .+. ..|.+++|+| ++.+|++|+.||.+++|++.+++...
T Consensus 121 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~--------------~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~~~~~~~~ 185 (450)
T 2vdu_B 121 ADSDKSLLVFDVDKTSKNVLKLRKRFCFS--------------KRPNAISIAE-DDTTVIIADKFGDVYSIDINSIPEEK 185 (450)
T ss_dssp EGGGTEEEEEEECSSSSSCEEEEEEEECS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTSCCCSS
T ss_pred ECCCCeEEEEECcCCCCceeeeeecccCC--------------CCceEEEEcC-CCCEEEEEeCCCcEEEEecCCccccc
Confidence 3468999999999 888888886 455 7899999999 89999999999999999998877553
Q ss_pred ----ee-cCCCCEEEEEEecC---CcEEEEeC-CCcEEEEEccCCCeEEEE-EeccCCceEEEEEcCCCCEEEEEecCCe
Q psy11036 80 ----SV-NHGSPVESVLCLPS---GGIFVTGG-GLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISASLDHH 149 (239)
Q Consensus 80 ----~~-~~~~~v~~~~~~~~---~~~l~~~~-~~~i~~~d~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~l~~~~~d~~ 149 (239)
.+ .|...|.+++|+|+ ++++++++ |+.|++||++ .++.+.. +.+|...|.+++|+ ++++|++++.|+.
T Consensus 186 ~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~ 263 (450)
T 2vdu_B 186 FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP-QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDK 263 (450)
T ss_dssp CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES-CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSE
T ss_pred ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC-CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCe
Confidence 44 68899999999999 98999888 8999999998 6666665 56899999999999 9999999999999
Q ss_pred EEEEEcc-cceEeeeecceeEE--EEEccCC--CEEEEEEecccCcEEEEEEccCCCeEEEEc-CCceEEEEEc--cCC-
Q psy11036 150 AKIYEMT-LKTVSSFTGGLDVC--IWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEM--VNF- 220 (239)
Q Consensus 150 i~i~d~~-~~~~~~~~~~~~i~--~~d~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~--~~~- 220 (239)
|++||++ ++.+..+.....+. .++.... .............|.+++|+|++++|++++ .|+.|++|++ .++
T Consensus 264 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~ 343 (450)
T 2vdu_B 264 IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG 343 (450)
T ss_dssp EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT
T ss_pred EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC
Confidence 9999998 55444442110000 0000000 000000012346799999999999999998 8999999999 666
Q ss_pred --eeeEEecCCCCeeeeEecC
Q psy11036 221 --SPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 221 --~~~~~~~~~~~v~~~~~sp 239 (239)
+.+..+.....+.+++|+|
T Consensus 344 ~l~~~~~~~~~~~v~~~~~~~ 364 (450)
T 2vdu_B 344 DLALKQIITFPYNVISLSAHN 364 (450)
T ss_dssp CEEEEEEEECSSCEEEEEEET
T ss_pred ceeeccEeccCCceEEEEecC
Confidence 7777787668999999987
No 91
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.4e-32 Score=214.16 Aligned_cols=175 Identities=18% Similarity=0.190 Sum_probs=145.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---cCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~~~~~ 117 (239)
..|++++|+|.++++|++|+.||+|+|||+.+++....+ +|.+.|++++|+| ++.+|++++ |++|++||++ ...
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~-~~~ 198 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK-GNI 198 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT-SCE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-CCc
Confidence 889999999977889999999999999999877654433 6999999999998 688999998 8999999997 443
Q ss_pred EEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 118 LLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 118 ~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
....... +...+.+++|+|++++|++|+.||.|++||++ .+.+..+.+|...|.+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~---------------------~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD---------------------GKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS---------------------SCBCCCSBCCSSCEEEEE
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC---------------------cceeEEEecccceEEeee
Confidence 3322222 33467899999999999999999999999988 333444578999999999
Q ss_pred EccCCC-eEEEEcCCceEEEEEccCCeeeEEe----cCCCCeeeeEecC
Q psy11036 196 LASGGK-RLISASLDHHAKIYEMVNFSPVHTL----DYPSPVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~----~~~~~v~~~~~sp 239 (239)
|+|++. +|++++.|+.|++||+++++....+ .|..+|++++|+|
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp 306 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP 306 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC
Confidence 999876 6789999999999999887654433 3788999999987
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-31 Score=224.10 Aligned_cols=203 Identities=17% Similarity=0.209 Sum_probs=171.0
Q ss_pred CCCCEEEEeeCC--CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCC--ce
Q psy11036 5 LPILIVALWDIP--SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS--SDIVISGSYDKTVNVYDTRSPD--PV 78 (239)
Q Consensus 5 ~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~vw~~~~~~--~~ 78 (239)
+.||.|+|||+. +++.+..+.+|. ++|++++|+| + +++|++|+.||.|++||+.+++ ..
T Consensus 28 ~~dg~I~vwd~~~~~~~~~~~l~~h~--------------~~V~~l~~s~-~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 28 SSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAH-PKFGTILASCSYDGKVLIWKEENGRWSQI 92 (753)
T ss_dssp ETTTEEEEEEEETTEEEEEEEECCCS--------------SCEEEEEECC-TTSCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred ECCCcEEEEecCCCCCccceeccCCc--------------CceEEEEecC-CCCCCEEEEEeCCCeEEEEECCCCccccc
Confidence 368999999997 557788899998 9999999998 5 8999999999999999999886 44
Q ss_pred eee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCC-CeEEEEEeccCCceEEEEEcC-------------CCCE
Q psy11036 79 MSV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLAS-------------GGKR 140 (239)
Q Consensus 79 ~~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~-~~~~~~~~~~~~~i~~i~~~~-------------~~~~ 140 (239)
..+ .|...|.+++|+|+ +..+++++ ||.|++||++.. ......+..|...|.+++|+| ++..
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 444 68999999999999 89999988 799999999843 134456778999999999999 5899
Q ss_pred EEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC---CCeEEEEcCCceEEEEE
Q psy11036 141 LISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG---GKRLISASLDHHAKIYE 216 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~i~iwd 216 (239)
+++|+.||.|++||++ ... ...+...+.+|...|.+++|+|+ +++|++++.||.|++||
T Consensus 173 l~sgs~dg~I~iwd~~~~~~-----------------~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQ-----------------TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp EEEEETTSCEEEEEEETTTT-----------------EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred EEEEECCCeEEEEeccCCcc-----------------cceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 9999999999999988 110 12556677899999999999999 89999999999999999
Q ss_pred ccCCe-----eeEE-ecCCCCeeeeEecC
Q psy11036 217 MVNFS-----PVHT-LDYPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~-----~~~~-~~~~~~v~~~~~sp 239 (239)
+.+++ .+.. ..+...|++++|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~sp 264 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSL 264 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECT
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcC
Confidence 98874 2222 22778999999987
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4e-30 Score=212.34 Aligned_cols=216 Identities=16% Similarity=0.219 Sum_probs=177.1
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCC---CeEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQD---YVRAGTVSPVS-SDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
+.|+.|++||+.+++.+..+..|. . .|.+++|+| + +++|++++.||.|++||+.+++.+..
T Consensus 180 ~~d~~v~vwd~~~~~~~~~~~~~~--------------~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 180 GDDGSVVFYQGPPFKFSASDRTHH--------------KQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp ETTTEEEEEETTTBEEEEEECSSS--------------CTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred eCCCcEEEEeCCCcceeeeecccC--------------CCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 357999999999999999999998 7 899999999 6 99999999999999999999999888
Q ss_pred e-----cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEecc----CCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 81 V-----NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCH----HKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 81 ~-----~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
+ .|...|.+++|+ ++.++++++ |+.|++||++ .++.+..+..+ ...+.++.|. ++.++++++.|+.|
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i 321 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT-TSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTL 321 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT-TTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCE
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC-CCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCE
Confidence 8 789999999999 999999988 7999999998 77888877766 3556666664 66677777777777
Q ss_pred EEEEcc-cceEeeee-----------------------------------------------------------------
Q psy11036 151 KIYEMT-LKTVSSFT----------------------------------------------------------------- 164 (239)
Q Consensus 151 ~i~d~~-~~~~~~~~----------------------------------------------------------------- 164 (239)
++||++ ++.+..+.
T Consensus 322 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~ 401 (615)
T 1pgu_A 322 NFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGIT 401 (615)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEE
T ss_pred EEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcc
Confidence 777765 22211110
Q ss_pred --------------------------------------------------------------c-ceeEEEEEccCCCEEE
Q psy11036 165 --------------------------------------------------------------G-GLDVCIWDMLGGGKLL 181 (239)
Q Consensus 165 --------------------------------------------------------------~-~~~i~~~d~~~~~~~~ 181 (239)
. ++.+++||+.+. +..
T Consensus 402 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~-~~~ 480 (615)
T 1pgu_A 402 KHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL-EVS 480 (615)
T ss_dssp EEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE-EEE
T ss_pred cCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc-ccc
Confidence 0 334555555442 222
Q ss_pred -EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec--CCCCeeeeEecC
Q psy11036 182 -HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 182 -~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
..+..|...|.+++|+|++++|++++.||.|++||+.+++++..+. |...|++++|+|
T Consensus 481 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 481 FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP 541 (615)
T ss_dssp EECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred ccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcC
Confidence 4556788999999999999999999999999999999999999887 888999999987
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-32 Score=209.45 Aligned_cols=194 Identities=10% Similarity=0.073 Sum_probs=155.1
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC---------C
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR---------S 74 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~---------~ 74 (239)
.+.||.|++||+.+++.+..+. . ..|.++.++| . +++++.|++|++|+.. +
T Consensus 54 g~~Dg~v~iwd~~~~~~~~~~~--~--------------~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTITTIT--T--------------PNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp EEETTEEEEEEESSSSCEEEEE--E--------------ECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred ECCCCcEEEEECCCCcEEEEEe--c--------------CCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCC
Confidence 4679999999999999888877 3 5688889998 4 9999999999999765 4
Q ss_pred CCceeee--cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCCeEEEEEe-ccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 75 PDPVMSV--NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 75 ~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
++.+..+ .|..+|.+++|+| +++++++++ |+.|++||++ .++...... .|...+.+++|+|++.+|++|+.|+
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 4444444 4668899999999 999999888 8999999998 666665553 4556899999999999999999999
Q ss_pred eEEEEEcccceEeeeecceeEEEEEccCCCEEE-EEEec-ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 149 HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLL-HKFTC-HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
.|++||++ ..+.. ..+.. |..+|.+++|+|++.+|++++ |+.|++||+++++.+..+
T Consensus 193 ~i~iwd~~--------------------~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 193 ILDVYNLS--------------------SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp CEEEEESS--------------------CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred EEEEEECC--------------------CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 99999998 22323 44566 999999999999999999999 559999999998776555
Q ss_pred c----CCCCee--eeEecC
Q psy11036 227 D----YPSPVL--SIDVSM 239 (239)
Q Consensus 227 ~----~~~~v~--~~~~sp 239 (239)
. +...+. +++|+|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp CCCBC-----CCEEEEECT
T ss_pred cccccccccccceEEEECC
Confidence 4 223343 588876
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-30 Score=219.56 Aligned_cols=205 Identities=19% Similarity=0.229 Sum_probs=178.5
Q ss_pred ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCc
Q psy11036 19 AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGG 97 (239)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 97 (239)
+..+.+.+|. +.|++++|+| ++.+|++++.||.|++||+.+++.+..+ .|..+|.+++|+|+++
T Consensus 4 ~~~~~~~~h~--------------~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 4 DIKKTFSNRS--------------DRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN 68 (814)
T ss_dssp CCEEEEEEEC--------------SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred ccceeeecCC--------------CceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC
Confidence 4456778888 9999999999 8999999999999999999999888888 6999999999999999
Q ss_pred EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c-ceEeee-----------
Q psy11036 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L-KTVSSF----------- 163 (239)
Q Consensus 98 ~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~~~~----------- 163 (239)
++++++ |+.|++||+. +++.+..+.+|...|.+++|+|++.+|++++.||.|++||++ . .....+
T Consensus 69 ~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (814)
T ss_dssp EEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEE
T ss_pred EEEEEeCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEE
Confidence 999998 7999999998 788889999999999999999999999999999999999998 3 322222
Q ss_pred ------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc--CCCeEEEEcCCceEEEEEccCCeeeEEec-C
Q psy11036 164 ------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEMVNFSPVHTLD-Y 228 (239)
Q Consensus 164 ------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~ 228 (239)
..++.+.+||+.+..........+...+..++|+| ++.+|++++.||.|++||+.+++.+..+. +
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 227 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 22455999999774444433344558899999999 99999999999999999999999999988 7
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
...|.+++|+|
T Consensus 228 ~~~v~~~~~~~ 238 (814)
T 3mkq_A 228 MSNVSFAVFHP 238 (814)
T ss_dssp SSCEEEEEECS
T ss_pred CCCEEEEEEcC
Confidence 88999999987
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-31 Score=227.20 Aligned_cols=212 Identities=10% Similarity=-0.008 Sum_probs=162.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.||.|+||+..+.+....+. |. .+|.+++|+| +++|++++.|++|++||+.+++.+..+.+.
T Consensus 36 s~Dg~I~lw~~~~~~~~~~~~-~~--------------~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~ 98 (902)
T 2oaj_A 36 TVTGEVHIYGQQQVEVVIKLE-DR--------------SAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQKVLTTVFVP 98 (902)
T ss_dssp ETTSEEEEECSTTCEEEEECS-SC--------------CCEEEEEEET--TTEEEEEETTCEEEEEETTTCSEEEEEECS
T ss_pred eCCCEEEEEeCCCcEEEEEcC-CC--------------CCEEEEEEcC--CCEEEEEECcCeEEEEECCCCcEEEEEcCC
Confidence 468999999998777655544 55 8899999999 459999999999999999999988888888
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE-----------EEEeccCCceEEEEEcCC-CCEEEEEecCCeEE
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL-----------HKFTCHHKTVTSLCLASG-GKRLISASLDHHAK 151 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~-----------~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~ 151 (239)
..|++++|+|+++++++++ ||.|++||++ ..+.. ..+.+|.++|.+++|+|+ +..+++++.|+.|
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~-~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQNGSMIVYDID-RDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SCEEEEECCTTCSEEEEEETTSCEEEEETT-TTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCEEEEEECCCCCEEEEEcCCCcEEEEECC-CCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 8999999999999999998 8999999998 55442 123568899999999996 4789999999999
Q ss_pred EEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE--ec-
Q psy11036 152 IYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT--LD- 227 (239)
Q Consensus 152 i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~--~~- 227 (239)
+||++ .+.+..+.+.... ........ ......|...|.+++|+|+|++|++++.||.|++||+++++++.. +.
T Consensus 177 lWd~~~~~~~~~~~~~~~~--g~~~~~~~-~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~ 253 (902)
T 2oaj_A 177 TYSLVENEIKQSFIYELPP--FAPGGDFS-EKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFE 253 (902)
T ss_dssp EEETTTTEEEEEECCCBCT--TCCCSTTC-CCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSC
T ss_pred EEECCCCceEEEEecccCC--cCCCcccc-cccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecc
Confidence 99998 3333333110000 00000000 000123467899999999999999999999999999999988764 21
Q ss_pred ----------------CCCCeeeeEec
Q psy11036 228 ----------------YPSPVLSIDVS 238 (239)
Q Consensus 228 ----------------~~~~v~~~~~s 238 (239)
+..+|++++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~ 280 (902)
T 2oaj_A 254 TEINVPQPDYIRDSSTNAAKISKVYWM 280 (902)
T ss_dssp SCTTSCCTTCCCCCSSCCCEEEEEEEE
T ss_pred cccCCCCCcCCCCCccccCCeeEEEEE
Confidence 23479999995
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-30 Score=203.72 Aligned_cols=188 Identities=20% Similarity=0.255 Sum_probs=158.2
Q ss_pred cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC--CCCceeee-cCCCCEEEEEEec
Q psy11036 18 EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR--SPDPVMSV-NHGSPVESVLCLP 94 (239)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~--~~~~~~~~-~~~~~v~~~~~~~ 94 (239)
|+++..+.+|. +.|++++|+| ++++|++|+.||.|++||+. +++....+ .|...|.+++|+|
T Consensus 1 G~~~~~~~~h~--------------~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~ 65 (379)
T 3jrp_A 1 GSMVVIANAHN--------------ELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH 65 (379)
T ss_dssp ----CCEEECC--------------CCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred CCccEEecCCc--------------ccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC
Confidence 35567788888 9999999999 89999999999999999997 44555556 6899999999997
Q ss_pred C--CcEEEEeC-CCcEEEEEccCCCe--EEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcccceEeeeecce
Q psy11036 95 S--GGIFVTGG-GLDVCIWDMLGGGK--LLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMTLKTVSSFTGGL 167 (239)
Q Consensus 95 ~--~~~l~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 167 (239)
+ +.++++++ |+.|++||++ .++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||++.
T Consensus 66 ~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~---------- 134 (379)
T 3jrp_A 66 PKFGTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE---------- 134 (379)
T ss_dssp GGGCSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT----------
T ss_pred CCCCCEEEEeccCCEEEEEEcC-CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC----------
Confidence 6 89999988 8999999998 565 67778889999999999999 99999999999999999981
Q ss_pred eEEEEEccCCCEEEEEEecccCcEEEEEEcc-------------CCCeEEEEcCCceEEEEEccCCe----eeEEec-CC
Q psy11036 168 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-------------GGKRLISASLDHHAKIYEMVNFS----PVHTLD-YP 229 (239)
Q Consensus 168 ~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-------------~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~-~~ 229 (239)
........+..|...|.+++|+| ++.+|++++.||.|++||+++++ .+..+. |.
T Consensus 135 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 135 --------NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp --------TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred --------CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 11233445678999999999999 69999999999999999998764 344555 78
Q ss_pred CCeeeeEecC
Q psy11036 230 SPVLSIDVSM 239 (239)
Q Consensus 230 ~~v~~~~~sp 239 (239)
.+|.+++|+|
T Consensus 207 ~~v~~~~~sp 216 (379)
T 3jrp_A 207 DWVRDVAWSP 216 (379)
T ss_dssp SCEEEEEECC
T ss_pred CcEeEEEECC
Confidence 8999999997
No 98
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.3e-32 Score=211.54 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=152.9
Q ss_pred CCCCCEEEEeeCCCccee-----eeeeCCceeeccceeeccCCCCCeEEEEEec-------CCCCEEEEeeCCCeEEEEe
Q psy11036 4 DLPILIVALWDIPSEAQV-----STFTNHTTIYKVPLMLYSTPQDYVRAGTVSP-------VSSDIVISGSYDKTVNVYD 71 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~s~~~dg~v~vw~ 71 (239)
.+.|++|+|||+++++.. ..+.+|. +.|.+++|+| .++++|++|+.|++|++||
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~--------------~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHH--------------NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCS--------------SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCC--------------CceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 356899999999887543 3467888 9999999987 2578999999999999999
Q ss_pred CCCCCceeee-cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEE-------------------------Ee
Q psy11036 72 TRSPDPVMSV-NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHK-------------------------FT 123 (239)
Q Consensus 72 ~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~-------------------------~~ 123 (239)
++++.+...+ .|..++.+++|+|++. ++++++ |+.|++||++ .++.... ..
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~-t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT-LNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT-CCC----------CSCCCSEEEESGGGC------
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC-CCcccccccccCCcccceEEecccccceeeeecc
Confidence 9887766555 7899999999999875 677777 8999999998 3332211 23
Q ss_pred ccCCceEEEEEc-CCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc--C
Q psy11036 124 CHHKTVTSLCLA-SGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS--G 199 (239)
Q Consensus 124 ~~~~~i~~i~~~-~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~--~ 199 (239)
+|...+.++.|+ |+++.+++++.|+.+++||+. ++....+.+. ...++.... .........+...+ ...++| +
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~ 328 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDS-TMKLGPKNL-LPNVQGISLFPSLL-GACPHPRYM 328 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CC-SCSEEEECSSCCSS-CCEECSSCT
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeee-cCccccEEE-ccccccccccCcce-eEEEccCCC
Confidence 577788999986 799999999999999999998 4433333211 111121111 11112222233333 334444 4
Q ss_pred CCeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 200 GKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 200 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
+.++++|+.||.|++||+.+++++..+. +..+|.+++|||
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp 369 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ 369 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC
Confidence 5567888999999999999998877665 888999999998
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-31 Score=208.73 Aligned_cols=193 Identities=13% Similarity=0.244 Sum_probs=159.9
Q ss_pred EeeCCCcceeeee-eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC---CC---ceeeecCC
Q psy11036 12 LWDIPSEAQVSTF-TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS---PD---PVMSVNHG 84 (239)
Q Consensus 12 vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~---~~---~~~~~~~~ 84 (239)
.|+ .+++.+..+ .+|. +.|++++|+|.++++|++|+.||+|++||+.+ +. ....+.|.
T Consensus 47 ~w~-~~g~~~~~~~~~h~--------------~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~ 111 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEP--------------NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS 111 (437)
T ss_dssp GGG-CCCCEEEEECTTTT--------------SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS
T ss_pred ccc-ccceEEeeeccCCC--------------CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC
Confidence 587 467888888 8888 99999999995578999999999999999876 43 34445789
Q ss_pred CCEEEEEEecCCcEEEEeC-CCcEEEEEcc--CCCeEEEEEec------------cCCceEEEE--EcCCCCEEEEEecC
Q psy11036 85 SPVESVLCLPSGGIFVTGG-GLDVCIWDML--GGGKLLHKFTC------------HHKTVTSLC--LASGGKRLISASLD 147 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~--~~~~~~~~~~~------------~~~~i~~i~--~~~~~~~l~~~~~d 147 (239)
..|.+++|+|++.++++++ |+.|++||++ ..++....+.. +...+.++. +++++.+|++++.|
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence 9999999999999999988 8999999994 13333333221 445666666 56789999999999
Q ss_pred CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 148 HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 148 ~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
+.|++||++ ..+++..+.. |...|.+++|+|++++|++|+.||.|++||+++++++..
T Consensus 192 ~~i~iwd~~--------------------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIR--------------------TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETT--------------------TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCC--------------------CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEE
Confidence 999999998 4566666677 889999999999999999999999999999999999998
Q ss_pred ec--CCCCeeeeEecC
Q psy11036 226 LD--YPSPVLSIDVSM 239 (239)
Q Consensus 226 ~~--~~~~v~~~~~sp 239 (239)
+. +..+|.+++|+|
T Consensus 252 ~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EBCTTCEEEEEEEECT
T ss_pred EecCCCCceEEEEecc
Confidence 74 667899997765
No 100
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-32 Score=206.30 Aligned_cols=179 Identities=20% Similarity=0.253 Sum_probs=149.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc--eeee-cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP--VMSV-NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~-~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d~~~~~ 116 (239)
+.|++++|+| ++++|++|+.|++|++||+.+++. +..+ +|..+|.+++|+| ++.+|++++ |+.|++||++...
T Consensus 14 ~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 14 DMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 9999999999 899999999999999999987653 4455 6999999999986 478888888 8999999998322
Q ss_pred -eEEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 117 -KLLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 117 -~~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
+....+.+|...|.+++|+|+ +.+|++++.|+.|++||++... .......+.+|...|.+
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~-----------------~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG-----------------QWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS-----------------CEEECCBTTSSSSCBCC
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC-----------------CcceeeeeccccCCcce
Confidence 466778899999999999997 7899999999999999987110 01112334678889999
Q ss_pred EEEccC-----------------CCeEEEEcCCceEEEEEccCC---eeeEEec-CCCCeeeeEecC
Q psy11036 194 LCLASG-----------------GKRLISASLDHHAKIYEMVNF---SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 194 ~~~s~~-----------------~~~l~s~s~d~~i~iwd~~~~---~~~~~~~-~~~~v~~~~~sp 239 (239)
++|+|+ +++|++|+.|+.|++||++.. +++..+. |...|.+++|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence 999997 478999999999999999765 4566666 888999999987
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-29 Score=192.75 Aligned_cols=199 Identities=22% Similarity=0.243 Sum_probs=170.3
Q ss_pred cceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCC
Q psy11036 18 EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSG 96 (239)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~ 96 (239)
.+...++.+|. +.|++++| | ++++|++++.||.|++||+.+++....+ .|...|.+++|+|++
T Consensus 8 ~~~~~~l~~h~--------------~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~ 71 (313)
T 3odt_A 8 YQLSATLKGHD--------------QDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK 71 (313)
T ss_dssp CEEEEEECCCS--------------SCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT
T ss_pred HHHHHHhhCCC--------------CCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC
Confidence 36778889998 99999999 7 7889999999999999999888777766 689999999999999
Q ss_pred cEEEEeC-CCcEEEEEccCC--CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeee----------
Q psy11036 97 GIFVTGG-GLDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF---------- 163 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------- 163 (239)
.++++++ ++.+++|++... .+....+..|...|.+++| +++.+++++.|+.|++||.. +.+..+
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG-SLVYNLQAHNASVWDA 148 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-EEEEEEECCSSCEEEE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-cEEEecccCCCceeEE
Confidence 9999998 899999998743 3567788899999999999 57899999999999999943 211111
Q ss_pred -------------ecceeEEEEEccCCCEEEEEEec-ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-C
Q psy11036 164 -------------TGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-Y 228 (239)
Q Consensus 164 -------------~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~ 228 (239)
..++.+++|| ..+....+.. |...|.+++|+|++. +++++.||.|++||+++++++..+. +
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d---~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~ 224 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQ---NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGH 224 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEE---TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEccCCCCEEEEEECCCCEEEEe---cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcC
Confidence 2345699999 3566677777 899999999999998 9999999999999999999999998 8
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
..+|.+++|+|
T Consensus 225 ~~~i~~~~~~~ 235 (313)
T 3odt_A 225 ESFVYCIKLLP 235 (313)
T ss_dssp SSCEEEEEECT
T ss_pred CceEEEEEEec
Confidence 88999999987
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.6e-30 Score=230.30 Aligned_cols=218 Identities=20% Similarity=0.252 Sum_probs=189.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--- 81 (239)
+.||.|++||+++++.+..+.+|. +.|++++|+| +++++++++.||.|++||+.+++....+
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~--------------~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 784 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHT--------------NSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVK 784 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCS--------------SCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECC
T ss_pred eCCCeEEEEECCCcchhheecCCC--------------CCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceeccc
Confidence 568999999999999999999999 9999999999 8999999999999999998765432211
Q ss_pred -----------------------------------------------------cCCCCEEEEEEecCCcEEEEeC-CCcE
Q psy11036 82 -----------------------------------------------------NHGSPVESVLCLPSGGIFVTGG-GLDV 107 (239)
Q Consensus 82 -----------------------------------------------------~~~~~v~~~~~~~~~~~l~~~~-~~~i 107 (239)
.|...+.+++|+|++..+++++ ++.|
T Consensus 785 ~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v 864 (1249)
T 3sfz_A 785 RFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCV 864 (1249)
T ss_dssp CCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCE
T ss_pred ccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeE
Confidence 3567888999999999999998 7999
Q ss_pred EEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc-----------------------------
Q psy11036 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK----------------------------- 158 (239)
Q Consensus 108 ~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~----------------------------- 158 (239)
++||+. .+..+..+.+|...|.+++|+|+++.+++++.|+.|++|++...
T Consensus 865 ~vwd~~-~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1249)
T 3sfz_A 865 ELWNID-SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNI 943 (1249)
T ss_dssp EEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESS
T ss_pred EEEEcC-CCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCC
Confidence 999999 78889999999999999999999999999999999999996510
Q ss_pred -------------------------------eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc
Q psy11036 159 -------------------------------TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 159 -------------------------------~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.+.....++.+.+||+.+ ++....+.+|...|.+++|+|++++|++++
T Consensus 944 ~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 944 RGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp SSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred cceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEECCCCCEEEEEc
Confidence 001112345689999886 566777889999999999999999999999
Q ss_pred CCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 208 LDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.||.|++||+.+++......+...+.+++|+|
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~ 1054 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQ 1054 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBCCSSCEEEEEECS
T ss_pred CCCEEEEEECCCCceEEEecCCCcEEEEEEcC
Confidence 99999999999999887777889999999976
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.9e-30 Score=195.76 Aligned_cols=176 Identities=6% Similarity=-0.008 Sum_probs=141.1
Q ss_pred CCCCEEEEeeC-CCcceeeeeeCCceeeccceeeccCCCCCeEEEEEec--CCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDI-PSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP--VSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
|.|+.|++|++ ++++.+..+.+|. ..++.++|++ .++.+|++++.|++|++||+++++++.++
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~~~--------------~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFLMP--------------PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEECC--------------CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCceeeeeccCC--------------CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 46899999999 5588888888887 7788888887 25689999999999999999999999988
Q ss_pred c-C---CCCEEEEEEecCCcEEE------------EeC-CCcEEEEEccCCCeEEEEE-----eccCCceEEEEEcCCCC
Q psy11036 82 N-H---GSPVESVLCLPSGGIFV------------TGG-GLDVCIWDMLGGGKLLHKF-----TCHHKTVTSLCLASGGK 139 (239)
Q Consensus 82 ~-~---~~~v~~~~~~~~~~~l~------------~~~-~~~i~~~d~~~~~~~~~~~-----~~~~~~i~~i~~~~~~~ 139 (239)
. + ...+.+++|+|+|.+++ +++ |++|++||.. +++.+..+ .+|...+.+..+ ++.
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~-tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~ 296 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK-TTLSVGVMLYCLPPGQAGRFLEGDV--KDH 296 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT-TTEEEEEEEECCCTTCCCCEEEEEE--ETT
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC-CCEEEEEEEeeccCCCcceeEcccc--CCC
Confidence 3 3 34678889999999874 344 6899999998 77776655 256555544444 478
Q ss_pred EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE-EEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 140 RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT-SLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.+++++.|++|+|||+. .++++..+.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 297 ~lASgS~DgTIkIWDl~--------------------tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLL--------------------LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTSCEEEEETT--------------------TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCcEEEEECC--------------------CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 89999999999999998 5667777788887655 5899999999999999999999996
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2.1e-30 Score=213.96 Aligned_cols=195 Identities=17% Similarity=0.184 Sum_probs=173.4
Q ss_pred CCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCC-eEEEEEecC-CCCEEEEeeCCCeEEEEeCCCC-----
Q psy11036 7 ILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDY-VRAGTVSPV-SSDIVISGSYDKTVNVYDTRSP----- 75 (239)
Q Consensus 7 dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~----- 75 (239)
++.|++||++++ +....+.+|. +. |++++|+|. ++++|++++.||.|++||+.++
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~--------------~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 103 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHG--------------SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 103 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTT--------------TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred CCeEEEEECCCCCCccccceEEecCC--------------CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccc
Confidence 689999999998 8899999998 99 999999993 4789999999999999999754
Q ss_pred ---Cceeee-cCCCCEEEEEEecCCcEEEEeC-C----CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEe
Q psy11036 76 ---DPVMSV-NHGSPVESVLCLPSGGIFVTGG-G----LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISAS 145 (239)
Q Consensus 76 ---~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~----~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~ 145 (239)
+....+ .|..+|.+++|+|+++++++++ + +.|.+|| .++.+..+..|...|.+++|+|+++ .+++++
T Consensus 104 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 180 (615)
T 1pgu_A 104 VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD---SGNSLGEVSGHSQRINACHLKQSRPMRSMTVG 180 (615)
T ss_dssp EEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT---TCCEEEECCSCSSCEEEEEECSSSSCEEEEEE
T ss_pred ccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE---CCCcceeeecCCccEEEEEECCCCCcEEEEEe
Confidence 444455 5889999999999999999988 3 4677776 4567888899999999999999997 899999
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC---cEEEEEEccC-CCeEEEEcCCceEEEEEccCCe
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK---TVTSLCLASG-GKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~---~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
.|+.|++||++ ..+.+..+.+|.. .|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 181 ~d~~v~vwd~~--------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 181 DDGSVVFYQGP--------------------PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp TTTEEEEEETT--------------------TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred CCCcEEEEeCC--------------------CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999987 5667777788998 9999999999 9999999999999999999999
Q ss_pred eeEEe-----cCCCCeeeeEec
Q psy11036 222 PVHTL-----DYPSPVLSIDVS 238 (239)
Q Consensus 222 ~~~~~-----~~~~~v~~~~~s 238 (239)
.+..+ .+..+|.+++|+
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~ 262 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWL 262 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEES
T ss_pred EeEEecccccccCCceEEEEEc
Confidence 99999 688899999985
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=1.7e-30 Score=202.21 Aligned_cols=179 Identities=12% Similarity=0.160 Sum_probs=155.7
Q ss_pred CCCCEEEEeeCCCcceeeee--eCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---ee
Q psy11036 5 LPILIVALWDIPSEAQVSTF--TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP---VM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~---~~ 79 (239)
+.||.|++||+++++....+ ..|. ..|.+++|+| ++++|++++.|+.|++||+..++. ..
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~ 135 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILRIN--------------RAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCK 135 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCS--------------SCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEE
T ss_pred cCCCeEEEEECCCCeeeeeEEeecCC--------------CceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeee
Confidence 46899999999888754443 5566 8999999999 789999999999999999988774 22
Q ss_pred ee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEcc-----------------CCCeEEEEEeccCCceEEEEEcCCCC
Q psy11036 80 SV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDML-----------------GGGKLLHKFTCHHKTVTSLCLASGGK 139 (239)
Q Consensus 80 ~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~-----------------~~~~~~~~~~~~~~~i~~i~~~~~~~ 139 (239)
.+ .|...|.+++|+|++.++++++ |+.|++||++ ..++.+..+..|...|.+++|+|+++
T Consensus 136 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 136 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 33 4789999999999999999988 8999999963 14678888889999999999999999
Q ss_pred EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 140 RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 140 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+|++++.|+.|++||++ ..+++..+..|..+|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 216 ~l~~~~~d~~i~i~d~~--------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADAD--------------------KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTTEEEEEEGG--------------------GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEeCCCEEEEEECC--------------------CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999999998 355666778899999999999999988888 899999999988
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=5.1e-29 Score=195.46 Aligned_cols=217 Identities=12% Similarity=0.195 Sum_probs=180.3
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
..+.|+.|++||+++++.+..+..| ..+.+++|+| +++++ ++++.|+.|++||+.+++....+
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~---------------~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~ 70 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVG---------------SNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATV 70 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECS---------------SSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEECCCCeEEEEeecC---------------CCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEE
Confidence 4578899999999999999999888 4589999999 66655 77779999999999999988888
Q ss_pred cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEEcc-c
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMT-L 157 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~i~d~~-~ 157 (239)
.+...+.+++|+|+++.+++++ ++.|++||+. .++.+..+.. ...+.+++|+|+++.+ ++++.|+.|++||++ +
T Consensus 71 ~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~-~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 71 PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT-SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ECCCCccceEECCCCCEEEEEECCCCEEEEEECC-CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 7667999999999999886554 5999999998 7777777764 4568999999999977 678889999999987 4
Q ss_pred ceEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc---CCceE
Q psy11036 158 KTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS---LDHHA 212 (239)
Q Consensus 158 ~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s---~d~~i 212 (239)
+.+..+ ..++.+.+||+++ .+....+. +...+.+++|+|++++|++++ .++.|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 433332 2245599999987 45555554 456899999999999998887 68999
Q ss_pred EEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
++||+.+++.+..+.....+.+++|+|
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~s~ 253 (391)
T 1l0q_A 227 SMIDTGTNKITARIPVGPDPAGIAVTP 253 (391)
T ss_dssp EEEETTTTEEEEEEECCSSEEEEEECT
T ss_pred EEEECCCCeEEEEEecCCCccEEEEcc
Confidence 999999999999998777889999986
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=1.2e-30 Score=207.76 Aligned_cols=212 Identities=17% Similarity=0.295 Sum_probs=164.3
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---ee
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV---MS 80 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~---~~ 80 (239)
.+.||.|++||+.+++.+..+..|. ..|.+++|++ +.+++|+.||.|++||+.+++.. ..
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 251 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHC--------------EAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRV 251 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCC--------------SCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCC--------------CcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeE
Confidence 3678999999999999999999998 9999999965 59999999999999999988765 33
Q ss_pred e-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c
Q psy11036 81 V-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L 157 (239)
Q Consensus 81 ~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~ 157 (239)
+ .|...|.++++ ++.++++++ |+.|++||++ .++.+..+.+|...|.++++ +++++++|+.||.|++||++ +
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS-TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC-cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence 3 68899999999 577888887 8999999999 78889999999999999999 46899999999999999998 6
Q ss_pred ceEeee--------------------ecceeEEEEEccCCCE--------EEEEEecccCcEEEEEEccCCCeEEEEcCC
Q psy11036 158 KTVSSF--------------------TGGLDVCIWDMLGGGK--------LLHKFTCHHKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 158 ~~~~~~--------------------~~~~~i~~~d~~~~~~--------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 209 (239)
+.+..+ ..++.|++||+.+... ++..+.+|...|.+++| ++++|++++.|
T Consensus 327 ~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS
T ss_pred CEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC
Confidence 665554 2345699999865321 77888999999999999 78899999999
Q ss_pred ceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 210 HHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
|.|++||+.+...........+..++.|.+
T Consensus 405 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 405 DTILIWDFLNDPAAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp SEEEEEC-----------------------
T ss_pred CEEEEEECCCCCCcccCCCCCCccceeeec
Confidence 999999999887777666666777776653
No 108
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.5e-31 Score=208.85 Aligned_cols=178 Identities=10% Similarity=0.047 Sum_probs=148.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC--Cceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe-
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP--DPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK- 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~- 117 (239)
++|++++|+| ++++|++|+.|+.|++||+.++ +....+ .|...|.+++|+|++++|++++ |+.|++||++ .++
T Consensus 12 ~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~-~~~~ 89 (377)
T 3dwl_C 12 KPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR-PDGT 89 (377)
T ss_dssp SCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------C
T ss_pred CcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC-CCCc
Confidence 7899999999 8999999999999999999987 566666 6899999999999999999988 8999999998 444
Q ss_pred --EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec-ccCcEEEE
Q psy11036 118 --LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSL 194 (239)
Q Consensus 118 --~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~ 194 (239)
....+..|...|.+++|+|++++|++++.|+.|++||++... .......+.. |...|.++
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------------~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN-----------------DWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----------------------CCCCEEECSSCCSCEEEE
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc-----------------cceeeeEeecccCCCeEEE
Confidence 566778899999999999999999999999999999988110 0113445566 99999999
Q ss_pred EEccCCCeEEEEcCCceEEEEEcc------------------CCeeeEEecCCCCeeeeEecC
Q psy11036 195 CLASGGKRLISASLDHHAKIYEMV------------------NFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iwd~~------------------~~~~~~~~~~~~~v~~~~~sp 239 (239)
+|+|++++|++++.|+.|++||+. .++++..+.+...|.+++|+|
T Consensus 153 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 215 (377)
T 3dwl_C 153 DWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP 215 (377)
T ss_dssp EECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT
T ss_pred EEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC
Confidence 999999999999999999999985 355666667888999999987
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-30 Score=200.19 Aligned_cols=184 Identities=9% Similarity=0.083 Sum_probs=142.9
Q ss_pred CCCCCEEEEeeCC---------Ccceeeeee-CCceeeccceeeccCCCCCeEEEEEecC-CCCEEEEeeCCCeEEEEeC
Q psy11036 4 DLPILIVALWDIP---------SEAQVSTFT-NHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVNVYDT 72 (239)
Q Consensus 4 ~~~dg~i~vwd~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~ 72 (239)
.+.|+.|++|+.. +++.+..+. .|. ++|.+++|+|. +++++++++.||+|++||+
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~ 156 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA--------------NEIIYMYGHNEVNTEYFIWADNRGTIGFQSY 156 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS--------------SCEEEEECCC---CCEEEEEETTCCEEEEES
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecCCC--------------CCEEEEEcCCCCCCCEEEEEeCCCcEEEEEC
Confidence 4678999999765 344344433 444 78999999992 3789999999999999999
Q ss_pred CCCCceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE-EEEec-cCCceEEEEEcCCCCEEEEEecC
Q psy11036 73 RSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL-HKFTC-HHKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 73 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~-~~~~i~~i~~~~~~~~l~~~~~d 147 (239)
++++..... .+...+.+++|+|++.++++|+ |+.|++||++ .++.. ..+.. |..+|++++|+|++.+|++++ |
T Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~ 234 (343)
T 3lrv_A 157 EDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS-SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D 234 (343)
T ss_dssp SSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS-CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S
T ss_pred CCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C
Confidence 999886655 3566899999999999999988 8999999999 55555 77787 999999999999999999999 5
Q ss_pred CeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcE--EEEEEccCCCeEEEEcC-CceEEEEEccCCe
Q psy11036 148 HHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV--TSLCLASGGKRLISASL-DHHAKIYEMVNFS 221 (239)
Q Consensus 148 ~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v--~~~~~s~~~~~l~s~s~-d~~i~iwd~~~~~ 221 (239)
+.|++||++ .+.+..+ ..+..|...+ .+++|+|++++|++++. |+.|++|++.+..
T Consensus 235 ~~v~iwd~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAY------------------PTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp SBEEEEETTSSTTCBSS------------------CCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CeEEEEEcCCCCcceee------------------cccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 599999998 3332222 1111122333 46999999999999988 9999999986543
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=208.22 Aligned_cols=171 Identities=12% Similarity=0.117 Sum_probs=140.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC-----CEEEEEEecCCcEEEEeC-CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS-----PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~ 116 (239)
..|.+++|+| ++.+|++++.||+|++||... ....+.|.. .+.+++|+|+|++|++++ ||+|++||+. .+
T Consensus 86 ~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~-~~ 161 (588)
T 2j04_A 86 CYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR-KN 161 (588)
T ss_dssp CCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC-CC
T ss_pred CcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC-CC
Confidence 8899999999 899999999999999999644 444445333 599999999999999999 7999999998 44
Q ss_pred e-------EEEEE----eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE-
Q psy11036 117 K-------LLHKF----TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF- 184 (239)
Q Consensus 117 ~-------~~~~~----~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~- 184 (239)
. .+.++ .+|...|.+++|+|+| +++++.|+.|++||+.+... .+....+
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~-----------------~~~~~tL~ 222 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH-----------------QPVSRMIQ 222 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS-----------------CCCEEEEE
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc-----------------ccceeeec
Confidence 3 36676 5677899999999999 88999999999999881110 0123445
Q ss_pred ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee-eEEecCCCCeeeeEe--cC
Q psy11036 185 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP-VHTLDYPSPVLSIDV--SM 239 (239)
Q Consensus 185 ~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~~~~v~~~~~--sp 239 (239)
.+|...|.+++|+ |+.||+++ ++.|++||+.+++. ...+.|.+.+.+++| +|
T Consensus 223 ~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~ 277 (588)
T 2j04_A 223 NASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK 277 (588)
T ss_dssp CCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS
T ss_pred ccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC
Confidence 3788899999999 68999997 69999999999888 555578899999999 75
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.8e-29 Score=200.79 Aligned_cols=195 Identities=21% Similarity=0.318 Sum_probs=157.2
Q ss_pred CCCCCEEEEeeCCCcce-------eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-
Q psy11036 4 DLPILIVALWDIPSEAQ-------VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP- 75 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~- 75 (239)
.+.||.|++||+.++.. ...+..|. ..|.+++|+|.++.+|++++.||.|++||++++
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~--------------~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHT--------------AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCS--------------SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCC--------------CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 35689999999987322 34566777 899999999977889999999999999999987
Q ss_pred --Cceeee-cCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCe
Q psy11036 76 --DPVMSV-NHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHH 149 (239)
Q Consensus 76 --~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~ 149 (239)
+....+ .|...|++++|+|++. ++++++ |+.|++||++....++..+..|...|.+++|+|+++ +|++++.|+.
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~ 345 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 345 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc
Confidence 455555 6889999999999887 576777 799999999955778888999999999999999985 6999999999
Q ss_pred EEEEEccc-ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccC
Q psy11036 150 AKIYEMTL-KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVN 219 (239)
Q Consensus 150 i~i~d~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~ 219 (239)
|++||+.. ......... .....+.+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 346 i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDA-------EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CEEEEGGGTTCCCCHHHH-------HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEEeCCCCccccCcccc-------ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 99999981 110000000 0001255666788999999999999999 899999999999999864
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.3e-30 Score=202.53 Aligned_cols=201 Identities=17% Similarity=0.270 Sum_probs=167.6
Q ss_pred CCCCEEEEeeCCCc-------ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 5 LPILIVALWDIPSE-------AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 5 ~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
+.||.|++||+.++ +++..+.+|. ..|.+++|+|++.++|++++.|+.|++||+++++.
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHT--------------KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCS--------------SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCC--------------CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 56899999999987 5677888898 99999999994347999999999999999999988
Q ss_pred eeee---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEE-eccCCc-eEEEEEcCCCCEEEEE---ecCC
Q psy11036 78 VMSV---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKF-TCHHKT-VTSLCLASGGKRLISA---SLDH 148 (239)
Q Consensus 78 ~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~-i~~i~~~~~~~~l~~~---~~d~ 148 (239)
+..+ .|...|.+++|+|++.++++++ |+.|++||++ .++.+..+ ..|.+. +.++.|+|++++|++| +.|+
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 167 VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR-KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT-TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC-CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 8877 3889999999999999999988 8999999999 78888888 678776 8999999999999999 7999
Q ss_pred eEEEEEcc-cce---Eeee--------------------e--cceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCC
Q psy11036 149 HAKIYEMT-LKT---VSSF--------------------T--GGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGG 200 (239)
Q Consensus 149 ~i~i~d~~-~~~---~~~~--------------------~--~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~ 200 (239)
.|++||++ .+. ...+ + +++.|++||+.+....+..+.. |...|.+++|+|++
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccc
Confidence 99999998 221 1111 2 2556999999876543444444 45899999999999
Q ss_pred CeEEEEcCCceEEEEEccCCee
Q psy11036 201 KRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
.++++ .++.+++|++.+++.
T Consensus 326 ~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 326 GLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp GSCGG--GTEEEEEEEEETTEE
T ss_pred cccee--cceeEEEEEcCCCcE
Confidence 98874 567999999988654
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2e-29 Score=195.65 Aligned_cols=206 Identities=13% Similarity=0.137 Sum_probs=153.4
Q ss_pred EeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEE
Q psy11036 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVL 91 (239)
Q Consensus 12 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~ 91 (239)
||++.+.+++.++..|. +.|.+++|+| ++++|++|+.++ +++|++.+++......+ ..+..++
T Consensus 3 i~s~~~~~~~~~~~~h~--------------~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~ 65 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVS--------------NPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVR 65 (355)
T ss_dssp ----------------C--------------CCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEE
T ss_pred cccccccCCccccccCC--------------CceEEEEECC-CCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEE
Confidence 56677777777778888 9999999999 889999988775 78999987765554433 2577888
Q ss_pred EecCCcEEEEe-C-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-c-ceEeee----
Q psy11036 92 CLPSGGIFVTG-G-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-L-KTVSSF---- 163 (239)
Q Consensus 92 ~~~~~~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~-~~~~~~---- 163 (239)
+.+++..++.. + ++.|++||+. .++.+..+. +..+|.+++++++. ++++ .|+.|++||+. . +.+..+
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~-~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~ 140 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDV-KKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFG 140 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETT-TTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECC-CCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCC
Confidence 88888887544 4 6899999998 788888877 67799999998764 3433 58899999998 4 332221
Q ss_pred ---------------ecceeEEEEEccCCC--------------EE-EEEEecccCcEEEEEEccCCCeEEEEcCCce-E
Q psy11036 164 ---------------TGGLDVCIWDMLGGG--------------KL-LHKFTCHHKTVTSLCLASGGKRLISASLDHH-A 212 (239)
Q Consensus 164 ---------------~~~~~i~~~d~~~~~--------------~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~-i 212 (239)
..++.|++||+.+.. .+ +..+.+|...|.+++|+|+|++|++|+.|++ |
T Consensus 141 ~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 141 GVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred ceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 234569999998743 12 6788999999999999999999999999998 9
Q ss_pred EEEEccCCeeeEEec---CCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~---~~~~v~~~~~sp 239 (239)
++||+++++++..+. |..+|++++|+|
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWST 250 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECT
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECC
Confidence 999999999999997 788999999997
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=6.9e-29 Score=191.13 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=162.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC----ceeeecCCCCEEEEEEecCCc-EEEEeC-CCcEEEEEc-cCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD----PVMSVNHGSPVESVLCLPSGG-IFVTGG-GLDVCIWDM-LGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~~~d~-~~~ 115 (239)
+.|++++|+| ++++|++++.|+.|++|++.+++ ......|...|.+++|+|+++ ++++++ ++.|++||+ . .
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~ 89 (342)
T 1yfq_A 12 DYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG-S 89 (342)
T ss_dssp SCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS-S
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc-C
Confidence 9999999999 79999999999999999998887 444447999999999999999 888888 899999999 7 4
Q ss_pred CeEEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEEccc---------ce-Eee-------------------ee
Q psy11036 116 GKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEMTL---------KT-VSS-------------------FT 164 (239)
Q Consensus 116 ~~~~~~~~~--~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~---------~~-~~~-------------------~~ 164 (239)
++ ...+.. |...|.+++|+| ++.+++++.|+.|++||++. .. +.. ..
T Consensus 90 ~~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 167 (342)
T 1yfq_A 90 PS-FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM 167 (342)
T ss_dssp SS-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEE
T ss_pred Cc-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEe
Confidence 43 367778 999999999999 99999999999999999873 21 111 13
Q ss_pred cceeEEEEEccC-CCE-EEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCC------eeeEEec-CCC----
Q psy11036 165 GGLDVCIWDMLG-GGK-LLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNF------SPVHTLD-YPS---- 230 (239)
Q Consensus 165 ~~~~i~~~d~~~-~~~-~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~------~~~~~~~-~~~---- 230 (239)
.++.+++||+++ ... .......|...|.+++|+| ++++|++++.||.|++|++... +....+. +..
T Consensus 168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC
T ss_pred CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccc
Confidence 355799999987 433 3344557888999999999 9999999999999999999877 7777776 433
Q ss_pred -----CeeeeEecC
Q psy11036 231 -----PVLSIDVSM 239 (239)
Q Consensus 231 -----~v~~~~~sp 239 (239)
+|.+++|+|
T Consensus 248 ~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 248 TNLAYPVNSIEFSP 261 (342)
T ss_dssp CSSCCCEEEEEECT
T ss_pred cccceeEEEEEEcC
Confidence 899999987
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.8e-28 Score=192.90 Aligned_cols=216 Identities=17% Similarity=0.166 Sum_probs=179.5
Q ss_pred CCCCEEEEeeCCCcceee-----eeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 5 LPILIVALWDIPSEAQVS-----TFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
+.++.|++||+.+++... .+.+|. ..|.+++|+| ++.++++++.|+.|++||+++++...
T Consensus 141 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--------------~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 141 LEDEGMDVLDINSGQTVRLSPPEKYKKKL--------------GFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp TTSSSEEEEETTTCCEEEECCCHHHHTTC--------------CEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCeEeeecCcccccccC--------------CceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEE
Confidence 457889999999998876 344565 8899999998 78999999999999999999998888
Q ss_pred ee-cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEe--------cCC
Q psy11036 80 SV-NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS--------LDH 148 (239)
Q Consensus 80 ~~-~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~--------~d~ 148 (239)
.+ .+...+.+++|+|+++.+++++ ++.|++||++ .++.+..+.. ...+.+++|+|+++.+++++ .|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK-TKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT-TTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC-CCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 77 5788999999999999885444 7999999998 7777777664 45689999999999999888 488
Q ss_pred eEEEEEcc-cceEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEE
Q psy11036 149 HAKIYEMT-LKTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 149 ~i~i~d~~-~~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 205 (239)
.|++||++ ++.+..+ ..++.+.+||+.+ .+....+. +...+.+++|+|++++|++
T Consensus 284 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 284 RLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYV 361 (433)
T ss_dssp EEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEE
Confidence 99999987 4332222 2345599999986 56666665 6778999999999998888
Q ss_pred EcC---------------CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 206 ASL---------------DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 206 ~s~---------------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
++. ||.|++||+.+++.+..+.....+.+++|+|
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 410 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSP 410 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECT
T ss_pred EecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcC
Confidence 776 5799999999999999998888899999987
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=196.52 Aligned_cols=197 Identities=17% Similarity=0.222 Sum_probs=157.1
Q ss_pred CCCCEEEEeeCCC-ccee-eeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPS-EAQV-STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+.||.|++||+++ ++.+ ..+.+|. ..|++++|+| ++++|++++.||.|++||+.+++......
T Consensus 61 ~~dg~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 61 SWANDVRCWEVQDSGQTIPKAQQMHT--------------GPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp ETTSEEEEEEECTTSCEEEEEEEECS--------------SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCcEEEEEcCCCCceeEEEecccc--------------CCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 4689999999987 5554 7788898 9999999999 89999999999999999999998887778
Q ss_pred CCCCEEEEEE--ecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC---------------------------------
Q psy11036 83 HGSPVESVLC--LPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH--------------------------------- 126 (239)
Q Consensus 83 ~~~~v~~~~~--~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~--------------------------------- 126 (239)
|...|.+++| +|++.++++++ |+.|++||++ .++.+..+..+.
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 204 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR-SSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEF 204 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS-CSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEE
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC-CCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchh
Confidence 9999999999 88999898888 8999999998 555444444322
Q ss_pred --------CceEEEEEcCCCCE----EEEEecCCeEEEEEcc-cc-------------------------eEeee-----
Q psy11036 127 --------KTVTSLCLASGGKR----LISASLDHHAKIYEMT-LK-------------------------TVSSF----- 163 (239)
Q Consensus 127 --------~~i~~i~~~~~~~~----l~~~~~d~~i~i~d~~-~~-------------------------~~~~~----- 163 (239)
..+.++++.++... +++++.|+.|++||++ .. .+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 284 (368)
T 3mmy_A 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV 284 (368)
T ss_dssp EECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTT
T ss_pred hhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecC
Confidence 23445555544433 8999999999999987 21 12221
Q ss_pred -------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 164 -------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 164 -------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
..++.|++||+.+ .+++..+.+|..+|.+++|+|++++|++++.|+..+.|++.
T Consensus 285 ~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 285 HGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp TCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 2345599999886 78888899999999999999999999999998866555543
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.8e-28 Score=189.24 Aligned_cols=177 Identities=13% Similarity=0.194 Sum_probs=142.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
+..+++||+++++....... ..+..+++.+ .++.+ ++++.|++|++||+.+++++..+.+..
T Consensus 39 ~~~~~iw~~~~~~~~~~~~~----------------~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~ 101 (355)
T 3vu4_A 39 LKSFEIYNVHPVAHIMSQEM----------------RHLSKVRMLH-RTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA 101 (355)
T ss_dssp SSEEEEEEETTEEEEEEEEC----------------SCCCEEEECT-TSSEEEEECSSTTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEecCCcceeeeeec----------------CCeEEEEEcC-CCCEEEEEECCccEEEEEECCCCcEEEEEECCC
Confidence 56689999988766544332 3466788888 55555 678888999999999999888888888
Q ss_pred CEEEEEEecCC-----------------------------------cEEEEe--C-CCcEEEEEccCCCe----------
Q psy11036 86 PVESVLCLPSG-----------------------------------GIFVTG--G-GLDVCIWDMLGGGK---------- 117 (239)
Q Consensus 86 ~v~~~~~~~~~-----------------------------------~~l~~~--~-~~~i~~~d~~~~~~---------- 117 (239)
+|.+++++++. ..++++ + +|.|++||++ .+.
T Consensus 102 ~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~-~~~~~~~~~~~~~ 180 (355)
T 3vu4_A 102 PVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQ-SSGSATTQDQGVQ 180 (355)
T ss_dssp CEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECC-C------------
T ss_pred ceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECC-CCCcccccccccc
Confidence 89988887643 233443 3 6889999987 322
Q ss_pred -----E-EEEEeccCCceEEEEEcCCCCEEEEEecCCe-EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-c-cc
Q psy11036 118 -----L-LHKFTCHHKTVTSLCLASGGKRLISASLDHH-AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-C-HH 188 (239)
Q Consensus 118 -----~-~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~-h~ 188 (239)
+ +..+.+|..+|.+++|+|+|++|++++.|++ |++||++ .++++..+. + |.
T Consensus 181 ~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~--------------------~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 181 QKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE--------------------DGVLVREFRRGLDR 240 (355)
T ss_dssp ------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT--------------------TCCEEEEEECTTCC
T ss_pred ccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC--------------------CCcEEEEEEcCCCC
Confidence 2 6778899999999999999999999999998 9999998 456666666 5 99
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
..|.+++|+|++++|++++.|+.|++||+..+.
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 999999999999999999999999999997653
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.2e-29 Score=209.37 Aligned_cols=177 Identities=20% Similarity=0.255 Sum_probs=153.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC--CCceeee-cCCCCEEEEEEecC--CcEEEEeC-CCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS--PDPVMSV-NHGSPVESVLCLPS--GGIFVTGG-GLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~--~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~-~~~i~~~d~~~~~ 116 (239)
+.|++++|+| ++++|++|+.||.|++||+.+ ++....+ .|..+|.+++|+|+ +.++++++ ||.|++||++ .+
T Consensus 10 ~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~-~~ 87 (753)
T 3jro_A 10 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE-NG 87 (753)
T ss_dssp CCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE-TT
T ss_pred ceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC-CC
Confidence 9999999999 789999999999999999984 4455556 69999999999987 89999988 8999999998 55
Q ss_pred e--EEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 117 K--LLHKFTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 117 ~--~~~~~~~~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
+ ....+..|...|.+++|+|+ ++.+++++.||.|++||++.. .......+.+|...|.
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~------------------~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN------------------GTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS------------------SCCCCEEEECCSSCEE
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC------------------CCcceeEeecCCCceE
Confidence 5 67778889999999999999 999999999999999999811 1223345678999999
Q ss_pred EEEEcc-------------CCCeEEEEcCCceEEEEEccCC----eeeEEec-CCCCeeeeEecC
Q psy11036 193 SLCLAS-------------GGKRLISASLDHHAKIYEMVNF----SPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 193 ~~~~s~-------------~~~~l~s~s~d~~i~iwd~~~~----~~~~~~~-~~~~v~~~~~sp 239 (239)
+++|+| ++.+|++|+.||.|++||++++ .+...+. |..+|.+++|+|
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc
Confidence 999999 5899999999999999999887 4555665 788999999997
No 119
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=196.43 Aligned_cols=181 Identities=12% Similarity=0.207 Sum_probs=143.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-----------ceeee-cCC------------CCEEEEEEecCC--
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-----------PVMSV-NHG------------SPVESVLCLPSG-- 96 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-----------~~~~~-~~~------------~~v~~~~~~~~~-- 96 (239)
+.|++++|+| ++++|++|+.||.|++||+.+++ ....+ .|. ..|.+++|+|++
T Consensus 29 ~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 29 DIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred CcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 8899999999 89999999999999999998776 34455 577 889999999997
Q ss_pred cEEEEeC-CCcEEEEEccCCCeE---------------------------------------EEE-EeccCCceEEEEEc
Q psy11036 97 GIFVTGG-GLDVCIWDMLGGGKL---------------------------------------LHK-FTCHHKTVTSLCLA 135 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~~~~---------------------------------------~~~-~~~~~~~i~~i~~~ 135 (239)
..+++++ |+.|++||+. .+.. ... ..+|...|.+++|+
T Consensus 108 ~~l~s~s~d~~i~iw~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKIS-ERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SEEEEEECSSCEEEEEEE-EEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred ceEEEeCCCCeEEEEecc-cccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 6777777 8999999987 3221 112 25799999999999
Q ss_pred CCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC-CeEEEEcCCceEE
Q psy11036 136 SGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG-KRLISASLDHHAK 213 (239)
Q Consensus 136 ~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~i~ 213 (239)
|++++|+++ .|+.|++||++ .... +.+.+... ..+.+|...|.+++|+|++ ++|++++.||.|+
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~--------~~~~~~~~-----~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRS--------FNIVDIKP-----ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEE--------EEEEECCC-----SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCce--------eeeeeccc-----ccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 999999998 89999999998 2111 11111110 0245789999999999998 9999999999999
Q ss_pred EEEccCCee----eEEec-CCC------------CeeeeEecC
Q psy11036 214 IYEMVNFSP----VHTLD-YPS------------PVLSIDVSM 239 (239)
Q Consensus 214 iwd~~~~~~----~~~~~-~~~------------~v~~~~~sp 239 (239)
+||+++++. +..+. +.. .|.+++|+|
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH 295 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC
Confidence 999999887 67777 443 899999987
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.1e-26 Score=182.24 Aligned_cols=203 Identities=13% Similarity=0.196 Sum_probs=167.3
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
+.++.|++||+.+++.+..+..+ ..+.+++|+| ++++| ++++.++.|++||+.+++.+..+.+
T Consensus 51 ~~d~~i~v~d~~~~~~~~~~~~~---------------~~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 51 AHSNDVSIIDTATNNVIATVPAG---------------SSPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp GGGTEEEEEETTTTEEEEEEECS---------------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEECCCCeEEEEEECC---------------CCccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeC
Confidence 35799999999999998888776 6799999999 66665 5566779999999999988888877
Q ss_pred CCCEEEEEEecCCcEE-EEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEEcc-cce
Q psy11036 84 GSPVESVLCLPSGGIF-VTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l-~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~~~~~d~~i~i~d~~-~~~ 159 (239)
...+.+++|+|+++.+ ++++ ++.|++||+. .++.+..+..+ ..+..++|+|+++.+ ++++.++.|++||++ .+.
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNGDKTVSVINTV-TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 7789999999999977 5666 7999999998 77888777765 456999999999887 577789999999997 433
Q ss_pred Eeee---------------------e---cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE-EEEcCCceEEE
Q psy11036 160 VSSF---------------------T---GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKI 214 (239)
Q Consensus 160 ~~~~---------------------~---~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~i~i 214 (239)
+..+ . .+..+.+||+.+ .+.+..+..|. .+.+++|+|++++| ++++.|+.|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v 270 (391)
T 1l0q_A 193 IDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSV 270 (391)
T ss_dssp EEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEE
Confidence 3222 1 356799999986 56777777755 47899999999877 67789999999
Q ss_pred EEccCCeeeEEec
Q psy11036 215 YEMVNFSPVHTLD 227 (239)
Q Consensus 215 wd~~~~~~~~~~~ 227 (239)
||+.+++.+..+.
T Consensus 271 ~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 271 IDTATNTITATMA 283 (391)
T ss_dssp EETTTTEEEEEEE
T ss_pred EECCCCcEEEEEE
Confidence 9999999988876
No 121
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-28 Score=208.99 Aligned_cols=183 Identities=11% Similarity=0.102 Sum_probs=151.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~ 121 (239)
+.|++++|+| ++++|++|+.||+|++|+..+.+....+.|..+|.+++|+| +++|++++ |+.|++||++ .++.+..
T Consensus 18 ~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~-~~~~~~~ 94 (902)
T 2oaj_A 18 SKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY-SQKVLTT 94 (902)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT-TCSEEEE
T ss_pred CCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC-CCcEEEE
Confidence 8999999999 89999999999999999998877766667889999999999 88888887 8999999998 6777777
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-C
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-G 200 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~ 200 (239)
+. |...|++++|+|++++|++|+.||.|++||++...+..+.-. .+|.. ...+.+|.++|.+++|+|+ +
T Consensus 95 ~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~---~~~~~------~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 95 VF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD---NLQKS------SFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp EE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC---CHHHH------HTCSSSCCCCCCEEEEETTEE
T ss_pred Ec-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceec---ccccc------ccccccCCCCeEEEEEccCCC
Confidence 76 778999999999999999999999999999982221111000 00000 0123578899999999996 5
Q ss_pred CeEEEEcCCceEEEEEccCCeeeEEecCC-------------------CCeeeeEecC
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPVHTLDYP-------------------SPVLSIDVSM 239 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-------------------~~v~~~~~sp 239 (239)
..|++|+.||.| +||+++++++..+... ..|++++|+|
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 789999999999 9999999999888733 6799999997
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.4e-28 Score=193.85 Aligned_cols=180 Identities=8% Similarity=0.038 Sum_probs=141.3
Q ss_pred CCCCCC-------CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q psy11036 1 MSHDLP-------ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73 (239)
Q Consensus 1 fs~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~ 73 (239)
|||+|. ||.|++||.++ ++..+. |.. .-....|.+++|+| ++++|++|+.||+|++||+.
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~---------~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG---------NLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSS---------CSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCC---------ccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECC
Confidence 566664 79999999644 666666 640 00012599999999 89999999999999999999
Q ss_pred CCCc-------eeee-----cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe--EEEEE-eccCCceEEEEEcCCC
Q psy11036 74 SPDP-------VMSV-----NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK--LLHKF-TCHHKTVTSLCLASGG 138 (239)
Q Consensus 74 ~~~~-------~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~--~~~~~-~~~~~~i~~i~~~~~~ 138 (239)
++.. +.++ +|...|.+++|+|+| +++++.|+.+++||+..... ..+++ .+|...|.+++|+ |
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g 236 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D 236 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C
Confidence 8753 3443 366799999999999 55555599999999983332 34566 4788999999999 6
Q ss_pred CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE--ccCCCeEEEEcCCceEEEEE
Q psy11036 139 KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL--ASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 139 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~s~d~~i~iwd 216 (239)
+.|++++ ++.|++||+. +.+......+|...|..++| +|++..|++++.||+ ++|.
T Consensus 237 ~~LASa~-~~tIkLWd~~--------------------~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLK--------------------NYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp TEEEEEC-SSEEEEEETT--------------------TTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred CEEEEEe-CCeEEEEECC--------------------CCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 8888887 7999999988 34442333379999999999 999999999999999 9998
Q ss_pred cc
Q psy11036 217 MV 218 (239)
Q Consensus 217 ~~ 218 (239)
..
T Consensus 295 ~d 296 (588)
T 2j04_A 295 ED 296 (588)
T ss_dssp SS
T ss_pred ec
Confidence 63
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3e-27 Score=178.49 Aligned_cols=209 Identities=11% Similarity=0.061 Sum_probs=145.9
Q ss_pred CCEEEEeeCCCc---ceeeeeeCCce-eeccce----------eeccCCCCCeEEEEEecCC----CCEEEEeeC-----
Q psy11036 7 ILIVALWDIPSE---AQVSTFTNHTT-IYKVPL----------MLYSTPQDYVRAGTVSPVS----SDIVISGSY----- 63 (239)
Q Consensus 7 dg~i~vwd~~~~---~~~~~~~~~~~-~~~~~~----------~~~~~~~~~v~~~~~~~~~----~~~l~s~~~----- 63 (239)
+..|++|+..++ +.++++..|+. .+.+-+ .........|.+++++| + ++.+++++.
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp-d~~~~~~~l~s~g~~~~v~ 140 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS-DDESEKQVLLKSGNIKAVL 140 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-------CCEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC-CccccccEEEeCCCeEEEE
Confidence 578999999988 78888888872 111100 01112224678888888 6 666666543
Q ss_pred ---------------CCeEEEEeC-CCCCceeee-cCCCCEEEEEEec---CCcEEEEeC-CCcEEEEEccCCCeEEEEE
Q psy11036 64 ---------------DKTVNVYDT-RSPDPVMSV-NHGSPVESVLCLP---SGGIFVTGG-GLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 64 ---------------dg~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~---~~~~l~~~~-~~~i~~~d~~~~~~~~~~~ 122 (239)
|+.|++|++ .+++.+..+ .|...+..++|+| ++..|++++ |++|++||++ +++.++++
T Consensus 141 ~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~-TGk~l~tL 219 (356)
T 2w18_A 141 GLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK-TGQLLKKM 219 (356)
T ss_dssp EETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-TCCEEEEE
T ss_pred ecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-CCcEEEEE
Confidence 888888888 446665555 5777888888888 678999988 8999999999 88899999
Q ss_pred eccCC---ceEEEEEcCCCCEEE------------EEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE---
Q psy11036 123 TCHHK---TVTSLCLASGGKRLI------------SASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF--- 184 (239)
Q Consensus 123 ~~~~~---~i~~i~~~~~~~~l~------------~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--- 184 (239)
.+|.. .+.+++|+|+|.+++ +|+.|++|++||.. + ++.+..+
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~-------------------t-gk~l~v~~~~ 279 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK-------------------T-TLSVGVMLYC 279 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT-------------------T-TEEEEEEEEC
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC-------------------C-CEEEEEEEee
Confidence 86543 677889999998874 45566666666665 2 3333332
Q ss_pred --ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCee-eeEecC
Q psy11036 185 --TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL-SIDVSM 239 (239)
Q Consensus 185 --~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~-~~~~sp 239 (239)
.+|...+.+..+ ++.++++++.|++|+|||+.+++.+.++. |...+. +++|||
T Consensus 280 ~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 280 LPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp CCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS
T ss_pred ccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC
Confidence 355555444444 48899999999999999999999999998 555554 589998
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=5.8e-26 Score=179.69 Aligned_cols=210 Identities=11% Similarity=0.030 Sum_probs=165.0
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC---eEEEEeCCCCCceeeecCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK---TVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~v~vw~~~~~~~~~~~~~~ 84 (239)
+.|++||++ +.....+..|. ..+.+++|+| +++.|++++.++ .|++||+.+++......+.
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~--------------~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSP--------------QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEES--------------SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred ceEEEEcCC-CCCCEEEeCCC--------------CcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 799999997 45567777887 8999999999 889999998875 9999999999876555788
Q ss_pred CCEEEEEEecCCcEEE-EeC-CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec-CC--eEEEEEccc
Q psy11036 85 SPVESVLCLPSGGIFV-TGG-GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMTL 157 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~-~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-d~--~i~i~d~~~ 157 (239)
..+.+++|+|+|+.|+ +++ ++ .|.+||+. .++. ..+..|...+.+++|+|+|++|++++. ++ .|.+||+..
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 8999999999999888 444 44 49999997 4443 567778889999999999999998876 45 677778762
Q ss_pred ceEeee-------------------------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc--
Q psy11036 158 KTVSSF-------------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH-- 210 (239)
Q Consensus 158 ~~~~~~-------------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~-- 210 (239)
.....+ .+...+.+||+.+... ..+..+. .+.+++|+|+|++|++++.++
T Consensus 301 ~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~ 377 (415)
T 2hqs_A 301 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGTMVIYSSSQGMG 377 (415)
T ss_dssp SCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSSEEEEEEEETTE
T ss_pred CCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCCEEEEEEcCCCc
Confidence 211111 1135689999886433 3344554 799999999999999888776
Q ss_pred -eEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 211 -HAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 211 -~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.|++||+. ++.+..+. +.+.|.+++|+|
T Consensus 378 ~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 378 SVLNLVSTD-GRFKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp EEEEEEETT-SCCEEECCCSSSEEEEEEECC
T ss_pred cEEEEEECC-CCcEEEeeCCCCCCcCCcccc
Confidence 89999996 45556665 778999999998
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1e-25 Score=171.56 Aligned_cols=189 Identities=23% Similarity=0.278 Sum_probs=150.3
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..+|+|++ + ++|++| .|++|++||+.+++.+..+ .|...|++++|+|+++++++|+ |+.|++||++ .++.+.
T Consensus 28 ~~~l~WS~-~-~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~-~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSS-G-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-QQKRLR 103 (318)
T ss_dssp CBCEEECT-T-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEE
T ss_pred ceEEEECC-C-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-CceeEE
Confidence 56799998 4 477665 5899999999999988766 4778899999999999999998 8999999999 889999
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc--cceEeee----------------------ecceeEEEEEccC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT--LKTVSSF----------------------TGGLDVCIWDMLG 176 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~----------------------~~~~~i~~~d~~~ 176 (239)
.+.+|...+.++.+ ++..+++++.++.+++|+.. ...+..+ ..++.+++||+++
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 99999998877655 56799999999999999987 2332222 2345588888764
Q ss_pred CCE---E--------------------------------------------EEEEecccCcEEEEEEccCCCeEEEEc--
Q psy11036 177 GGK---L--------------------------------------------LHKFTCHHKTVTSLCLASGGKRLISAS-- 207 (239)
Q Consensus 177 ~~~---~--------------------------------------------~~~~~~h~~~v~~~~~s~~~~~l~s~s-- 207 (239)
... . ......+...+..+.|+|+++.+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 210 0 001112445677888899888777654
Q ss_pred CCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 208 LDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.|+.|++||+.+++++.++. |.++|++++|+|
T Consensus 262 ~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 262 AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp TTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 79999999999999999998 889999999997
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.3e-27 Score=188.01 Aligned_cols=178 Identities=8% Similarity=0.044 Sum_probs=127.0
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-- 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-- 81 (239)
.+.|++|+|||+.++.++..+..|. .+|.+++|+|+++++|++++.|++|++||+++++.....
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~--------------~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLS--------------SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECS--------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred EECCCeEEEEECCCCceeeeecCCC--------------CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 4679999999999888888888887 899999999955568999999999999999877543221
Q ss_pred ------------------------cCCCCEEEEEEe-cCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEE--
Q psy11036 82 ------------------------NHGSPVESVLCL-PSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLC-- 133 (239)
Q Consensus 82 ------------------------~~~~~v~~~~~~-~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~-- 133 (239)
.|...+.++.|+ |+++.+++++ |+.+++||+. .++....+..|...+..+.
T Consensus 228 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~-~~~~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 228 TELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF-ANNDYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp ---CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCS
T ss_pred cCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc-cCCCCceEeeecCccccEEEc
Confidence 255678888887 7999999998 8999999997 5555555544444333333
Q ss_pred ----------------EcC--CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 134 ----------------LAS--GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 134 ----------------~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
++| ++.++++|+.||.|++||+. .++.......|..+|.+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~--------------------~~~~~~~~~~~~~~V~sva 366 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY--------------------EKDSNSIPIQLGMPIVDFC 366 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT--------------------CTTCCEEEEECSSCEEEEE
T ss_pred cccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECC--------------------CCcEEEEecCCCCcEEEEE
Confidence 333 33466778889999999987 3444555577889999999
Q ss_pred EccCCCeEEEEcCCceEEEEEc
Q psy11036 196 LASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
|+|||++||+++.+| +.+|++
T Consensus 367 fspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 367 WHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ECTTSSEEEEEESSE-EEEEEE
T ss_pred EcCCCCEEEEEeCCC-eEEEEE
Confidence 999999999998776 555555
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2.2e-25 Score=176.96 Aligned_cols=212 Identities=12% Similarity=0.071 Sum_probs=171.0
Q ss_pred EEEEeeCCCc--ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-----
Q psy11036 9 IVALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV----- 81 (239)
Q Consensus 9 ~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~----- 81 (239)
.|+.+|..++ +.+..+..+ ..+.+++|+| ++.++++++.++.|++||+.+++.....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~---------------~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 165 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG---------------FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY 165 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS---------------SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH
T ss_pred EEEEECCCCCcceEEEEEcCC---------------CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccc
Confidence 5555565444 455556555 4466999999 8889999999999999999999877632
Q ss_pred -cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEE-EecCCeEEEEEcc-c
Q psy11036 82 -NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS-ASLDHHAKIYEMT-L 157 (239)
Q Consensus 82 -~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~d~~i~i~d~~-~ 157 (239)
.|...+.+++|+|++.++++++ ++.|++||++ .++.+..+..|...+.+++|+|+++.+++ ++.|+.|++||++ +
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 4778999999999999999988 7999999998 77888888889999999999999998855 4479999999987 4
Q ss_pred ceEeee---------------------e--------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe-EEEEc
Q psy11036 158 KTVSSF---------------------T--------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISAS 207 (239)
Q Consensus 158 ~~~~~~---------------------~--------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s 207 (239)
+.+..+ . +++.|++||+.+ ++....+ .|...+.+++|+|+++. +++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 245 LEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp EEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEET
T ss_pred cEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEec
Confidence 443332 1 245688999886 4444443 45568899999999975 46778
Q ss_pred CCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 208 LDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.|+.|++||+.+++.+..+.+...+.+++|+|
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~ 354 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSP 354 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECT
T ss_pred CCCEEEEEECCCCcEEEEecCCCCCCeEEEcC
Confidence 99999999999999999999888999999987
No 128
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=2.7e-24 Score=164.96 Aligned_cols=216 Identities=12% Similarity=0.093 Sum_probs=171.1
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCC--CeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCcee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQD--YVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
..+.++.|++||+.+++.+..+.... . .+..++|+| +++ +++++..++.|.+||+.+++.+.
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIAD--------------AGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLG 70 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTT--------------CTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCC--------------CCCCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEe
Confidence 34678999999999999888876542 2 578999999 565 45666778999999999998877
Q ss_pred eecCCC------CEEEEEEecCCcEEEEe-------------CCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCE
Q psy11036 80 SVNHGS------PVESVLCLPSGGIFVTG-------------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140 (239)
Q Consensus 80 ~~~~~~------~v~~~~~~~~~~~l~~~-------------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 140 (239)
.+.... .+..++|+|+++.++++ .++.|.+||+. .++....+.. ...+..++|+|++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~~~~~~~-~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE-TLSRRKAFEA-PRQITMLAWARDGSK 148 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT-TTEEEEEEEC-CSSCCCEEECTTSSC
T ss_pred eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC-CCcEEEEEeC-CCCcceeEECCCCCE
Confidence 664332 67789999999988887 35899999997 7777776664 456788999999998
Q ss_pred EEEEecCCeEEEEEcc-cceEeeeecce---------------------------------------------eEEEEEc
Q psy11036 141 LISASLDHHAKIYEMT-LKTVSSFTGGL---------------------------------------------DVCIWDM 174 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~-~~~~~~~~~~~---------------------------------------------~i~~~d~ 174 (239)
++++ ++.|.+||+. ++....+.... .+.+||+
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8887 6899999998 55443331111 4689999
Q ss_pred cCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 175 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.+.......+..+...+..++|+|++++++++ ++.|++||+.+++.+..+.....+.+++|+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 289 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVST 289 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECT
T ss_pred CCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECC
Confidence 87554444556667788899999999999888 7999999999999999888777888999986
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=9.5e-25 Score=164.23 Aligned_cols=219 Identities=13% Similarity=0.095 Sum_probs=162.2
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSV 81 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~ 81 (239)
.++.++.|++||+.+++.. .+..|. ..|.+++|+| ++++|++++ ++.|++||+.+ ++.....
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~--------------~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTP--------------ELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEES--------------SCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCC--------------cceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEec
Confidence 3567899999999888765 444566 8899999999 788888876 78999999998 7766555
Q ss_pred c-C-CCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEEEEc
Q psy11036 82 N-H-GSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEM 155 (239)
Q Consensus 82 ~-~-~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~i~d~ 155 (239)
. + ...+.+++|+|+++.++++. ++...+|.++........+..+ ..+..++|+|+++.|+ +++.++.+++|++
T Consensus 80 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 80 TGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp CTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred cccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 3 3 46788999999999998887 2456666554233334444433 4588999999999877 7888999999996
Q ss_pred c--cceEeee----------------------e-cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC-
Q psy11036 156 T--LKTVSSF----------------------T-GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD- 209 (239)
Q Consensus 156 ~--~~~~~~~----------------------~-~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d- 209 (239)
+ ......+ . .+..+.+|++.........+..|...+..++|+|++++|++++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 159 DIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp ETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred ECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 5 2222221 1 133466777664445556677778889999999999999888765
Q ss_pred ----------ceEEEEEccCCee--eEEe-cCCCCeeeeEecC
Q psy11036 210 ----------HHAKIYEMVNFSP--VHTL-DYPSPVLSIDVSM 239 (239)
Q Consensus 210 ----------~~i~iwd~~~~~~--~~~~-~~~~~v~~~~~sp 239 (239)
+.|++||+.+++. +..+ .+...+.+++|+|
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 281 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSP 281 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCT
T ss_pred CCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECC
Confidence 5799999988765 3333 3677899999987
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.7e-24 Score=172.12 Aligned_cols=174 Identities=13% Similarity=0.095 Sum_probs=137.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----------------CceeeecCCCCEEEEEEecCCcEEE----Ee
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----------------DPVMSVNHGSPVESVLCLPSGGIFV----TG 102 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~----~~ 102 (239)
..+..+++++ .+.++++++.|+ +++|+.... .....+.+...|.+++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4588999999 788999998887 888875311 0112234667899999999999999 56
Q ss_pred C-CCcEEEEEccCC-----C--e---EEEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEEcccceEeeeecceeEE
Q psy11036 103 G-GLDVCIWDMLGG-----G--K---LLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVC 170 (239)
Q Consensus 103 ~-~~~i~~~d~~~~-----~--~---~~~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~ 170 (239)
+ |+.|++||++.. . + .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~-------------- 180 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT-------------- 180 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES--------------
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC--------------
Confidence 6 799999998632 1 1 24556679999999999997 7899999999999999998
Q ss_pred EEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-C-------CCCeeeeEecC
Q psy11036 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-Y-------PSPVLSIDVSM 239 (239)
Q Consensus 171 ~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~-------~~~v~~~~~sp 239 (239)
.........+|...|.+++|+|+|++|++|+.||.|++||++ ++....+. + ...+.+++|+|
T Consensus 181 ------~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 181 ------ETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp ------SSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred ------CCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 334444556788999999999999999999999999999998 66665554 2 12788888874
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=7.7e-23 Score=166.70 Aligned_cols=217 Identities=14% Similarity=0.102 Sum_probs=172.9
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeC--CCCCceeee
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDT--RSPDPVMSV 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~--~~~~~~~~~ 81 (239)
.+.++.|.+||..+++.+.++..+. . +..++|+| ++++|++++.|++|++||+ .+++.+..+
T Consensus 155 ~~~d~~V~v~D~~t~~~~~~i~~g~--------------~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVKVIDTGY--------------A-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECST--------------T-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EcCCCeEEEEECCCceEEEEEecCc--------------c-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence 3457999999999999999998664 4 88999999 8999999999999999999 788888888
Q ss_pred cCCCCEEEEEEec----CCcEEEEeC--CCcEEEEEccCCCeEEEEEecc----------CC-ceEEEEEcCCCC-EEEE
Q psy11036 82 NHGSPVESVLCLP----SGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH----------HK-TVTSLCLASGGK-RLIS 143 (239)
Q Consensus 82 ~~~~~v~~~~~~~----~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~----------~~-~i~~i~~~~~~~-~l~~ 143 (239)
.+...+..++|+| +|+++++++ +++|.+||.. +.+.+..+..+ .. .+..+.++|++. ++++
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~-t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE-TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT-TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc-ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 7777889999999 999999988 6999999998 78888877642 22 688999999775 5566
Q ss_pred EecCCeEEEEEcc-cceEe--ee----------------------ecceeEEEEEccCCCEEEEEEec----ccCcEEEE
Q psy11036 144 ASLDHHAKIYEMT-LKTVS--SF----------------------TGGLDVCIWDMLGGGKLLHKFTC----HHKTVTSL 194 (239)
Q Consensus 144 ~~~d~~i~i~d~~-~~~~~--~~----------------------~~~~~i~~~d~~~~~~~~~~~~~----h~~~v~~~ 194 (239)
...++.|.+||+. .+.+. .+ .++..|.+||..+ ++++..+.. |.+....+
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE
T ss_pred ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc
Confidence 7778999999986 22111 11 2345699999987 577777664 55444333
Q ss_pred EEccC-CCeEEEEc-CCceEEEEEccC-------CeeeEEec-CCCCeeeeEecC
Q psy11036 195 CLASG-GKRLISAS-LDHHAKIYEMVN-------FSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 195 ~~s~~-~~~l~s~s-~d~~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~sp 239 (239)
++|+ +.+++++. .|++|.+||+.+ ++.++++. +...+..+++||
T Consensus 377 -~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p 430 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP 430 (543)
T ss_dssp -EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT
T ss_pred -CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC
Confidence 4676 66777776 689999999998 89999998 556788888887
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=8.4e-24 Score=167.32 Aligned_cols=194 Identities=12% Similarity=0.090 Sum_probs=145.8
Q ss_pred EEEEeeC--CCccee--eeeeCCceeeccceeeccCCCCCeEEEEEecC-------------CCCEEEEeeCC------C
Q psy11036 9 IVALWDI--PSEAQV--STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-------------SSDIVISGSYD------K 65 (239)
Q Consensus 9 ~i~vwd~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~~l~s~~~d------g 65 (239)
.|+|||+ .+++.+ ..+.+|. ..+..+++.+. .+..++.++.+ +
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~ 159 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNK--------------QWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY 159 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECG--------------GGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcCh--------------hHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccc
Confidence 8999999 898877 4577887 56666665531 14556555544 7
Q ss_pred eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-C---CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEE
Q psy11036 66 TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-G---LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141 (239)
Q Consensus 66 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l 141 (239)
.|++||+..+.......|...+.+++|+|+|+.+++++ + ..|++||+. +++.. .+..|...+.+++|+|+|+.|
T Consensus 160 ~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~-tg~~~-~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 160 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA-NGAVR-QVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEE-EEECCSSCEEEEEECTTSSEE
T ss_pred eEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC-CCcEE-EeecCCCcccCEEEcCCCCEE
Confidence 99999998554433337889999999999999999887 4 389999998 55544 566788899999999999988
Q ss_pred E-EEecCCe--EEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-Cc--eEEEE
Q psy11036 142 I-SASLDHH--AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIY 215 (239)
Q Consensus 142 ~-~~~~d~~--i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~--~i~iw 215 (239)
+ +++.++. |++||++ + ++ ...+..|...+.+++|+|||++|++++. ++ .|++|
T Consensus 238 a~~~~~~g~~~i~~~d~~-------------------~-~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLA-------------------S-GQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp EEEECTTSSCEEEEEETT-------------------T-CC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEEEecCCCceEEEEECC-------------------C-CC-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 8 5665554 7777766 2 22 2445677888999999999999988876 45 68888
Q ss_pred EccCCeeeEEecCCCCeeeeEecC
Q psy11036 216 EMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 216 d~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
|+.+++......+...+.+++|+|
T Consensus 297 d~~~~~~~~l~~~~~~~~~~~~sp 320 (415)
T 2hqs_A 297 NINGGAPQRITWEGSQNQDADVSS 320 (415)
T ss_dssp ETTSSCCEECCCSSSEEEEEEECT
T ss_pred ECCCCCEEEEecCCCcccCeEECC
Confidence 998877544333667888999987
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1.2e-22 Score=155.71 Aligned_cols=202 Identities=13% Similarity=0.177 Sum_probs=152.0
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEe-eCCCeEEEEeCCCCCc-eee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG-SYDKTVNVYDTRSPDP-VMS 80 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~v~vw~~~~~~~-~~~ 80 (239)
.++.++.|++||+++++.+..+..+. ..+ .++|+| ++++++++ ..++.|.+||+.+++. ...
T Consensus 15 ~~~~~~~v~~~d~~~~~~~~~~~~~~--------------~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 15 VEQHLRRISFFSTDTLEILNQITLGY--------------DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEECCC--------------CEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred EecCCCeEEEEeCcccceeeeEEccC--------------Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 34567999999999999888887765 667 999999 67755554 4489999999999887 666
Q ss_pred ec-CCCCEEEEEEecCCcEEEEeCCC----cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCe-EEEE
Q psy11036 81 VN-HGSPVESVLCLPSGGIFVTGGGL----DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHH-AKIY 153 (239)
Q Consensus 81 ~~-~~~~v~~~~~~~~~~~l~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~-i~i~ 153 (239)
+. +..+..+++|+|++++++++.++ .|.+||+. .++.+..+..+ .....++|+|+|++++++ ..++. +.+|
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEE
Confidence 64 44444449999999999966543 89999998 77777777644 456899999999866555 45578 9999
Q ss_pred Ecc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE-EEEcCCceEEEEEccCCee---eEEecC
Q psy11036 154 EMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMVNFSP---VHTLDY 228 (239)
Q Consensus 154 d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~i~iwd~~~~~~---~~~~~~ 228 (239)
++. ...+... . ...+ .....+..++|+|+|+++ +++..++.|++||+.+++. +..+..
T Consensus 157 ~~~~~g~~~~~---------------~-~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 157 KIDADGVLFDT---------------G-QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp EECTTCCEEEE---------------E-EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred EECCCCcEeec---------------C-Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 987 1111111 0 1111 334557899999999965 5555789999999999998 888887
Q ss_pred CCCeeeeEecC
Q psy11036 229 PSPVLSIDVSM 239 (239)
Q Consensus 229 ~~~v~~~~~sp 239 (239)
...+..++|+|
T Consensus 220 ~~~~~~~~~sp 230 (331)
T 3u4y_A 220 NNLPGTIVVSR 230 (331)
T ss_dssp SSCCCCEEECT
T ss_pred CCCCceEEECC
Confidence 78889999987
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=3.8e-22 Score=162.66 Aligned_cols=217 Identities=10% Similarity=0.096 Sum_probs=168.0
Q ss_pred CCCEEEEeeC--CCcceeeeeeCCceeeccceeeccCCCCCeEEEEEec----CCCCEEEEee-CCCeEEEEeCCCCCce
Q psy11036 6 PILIVALWDI--PSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP----VSSDIVISGS-YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~-~dg~v~vw~~~~~~~~ 78 (239)
.++.|++||+ .+++.+.++..+ ..+..++|+| + ++++++++ .+++|.+||..+++++
T Consensus 198 ~d~~V~v~D~~~~t~~~~~~i~~g---------------~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 198 RDARIDMIDLWAKEPTKVAEIKIG---------------IEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp TTSEEEEEETTSSSCEEEEEEECC---------------SEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCCEE
T ss_pred CCCeEEEEECcCCCCcEEEEEecC---------------CCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEeccccccc
Confidence 4699999999 888888888865 5679999998 5 56666666 5899999999999988
Q ss_pred eeecC------------CCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEE-EEEeccCCceEEEEEcCCCCEEEE
Q psy11036 79 MSVNH------------GSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL-HKFTCHHKTVTSLCLASGGKRLIS 143 (239)
Q Consensus 79 ~~~~~------------~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~~ 143 (239)
..+.. ...+..+.++|++..+++.. ++.|.+||........ ..+. +...+..+.|+|+|+++++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEE
Confidence 77632 23789999999877666554 6999999997322222 2343 5667889999999998766
Q ss_pred Ee-cCCeEEEEEcc-cceEeee------------------------e---cceeEEEEEccCC------CEEEEEEeccc
Q psy11036 144 AS-LDHHAKIYEMT-LKTVSSF------------------------T---GGLDVCIWDMLGG------GKLLHKFTCHH 188 (239)
Q Consensus 144 ~~-~d~~i~i~d~~-~~~~~~~------------------------~---~~~~i~~~d~~~~------~~~~~~~~~h~ 188 (239)
++ .+++|.+||+. ++.+..+ + ++..|.+||..+. .+.+..+..|.
T Consensus 341 a~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g 420 (543)
T 1nir_A 341 AANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG 420 (543)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred EecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC
Confidence 55 58999999997 4443332 1 2356899998762 67889999998
Q ss_pred CcEEEEEEccCCCeEEEEc-------CCceEEEEEccCCeee-EEe---------cCCCCeeeeEecC
Q psy11036 189 KTVTSLCLASGGKRLISAS-------LDHHAKIYEMVNFSPV-HTL---------DYPSPVLSIDVSM 239 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s-------~d~~i~iwd~~~~~~~-~~~---------~~~~~v~~~~~sp 239 (239)
..+..++++|++++|++++ .+++|.+||+.+++.. ..+ .+...+..++|+|
T Consensus 421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 488 (543)
T 1nir_A 421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK 488 (543)
T ss_dssp SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECS
T ss_pred CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCC
Confidence 8889999999999999987 2779999999999877 444 2456788888886
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.2e-21 Score=151.16 Aligned_cols=206 Identities=11% Similarity=0.093 Sum_probs=156.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeeec
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS--YDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~v~vw~~~~~~~~~~~~ 82 (239)
..++.|.+||..+++.+..+..+... .........+.+++|+| +++.+++++ .++.|.+||..+++....+.
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDRK-----RTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCCC-----CCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCCc-----cccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 34689999999999988888765300 00000001278999999 677666554 57899999999998888876
Q ss_pred -CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEec----cCCceEEEEEcCCCCEEEEEec-CCeEEEEEc
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC----HHKTVTSLCLASGGKRLISASL-DHHAKIYEM 155 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~ 155 (239)
+...+..++|+|+++.++++. ++.+.+||+. .++....+.. +...+..++|+|+++++++++. ++.|.+||.
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 666688999999999988888 7999999998 7777777664 4556888999999997776665 489999998
Q ss_pred ccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEE-EEcCCceEEEEEccCCeeeEEecCCCCeee
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMVNFSPVHTLDYPSPVLS 234 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~ 234 (239)
. .++.+..+.... ...++|+|++++++ +...++.|.+||..+++.+..+.....+.+
T Consensus 261 ~--------------------~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 318 (353)
T 3vgz_A 261 R--------------------NGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNS 318 (353)
T ss_dssp T--------------------TCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEE
T ss_pred C--------------------CCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCe
Confidence 7 233333333322 24689999999655 445799999999999999999998888999
Q ss_pred eEecC
Q psy11036 235 IDVSM 239 (239)
Q Consensus 235 ~~~sp 239 (239)
++|+|
T Consensus 319 ~~~s~ 323 (353)
T 3vgz_A 319 LALSA 323 (353)
T ss_dssp EEECT
T ss_pred EEEcC
Confidence 99986
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.3e-22 Score=171.33 Aligned_cols=226 Identities=13% Similarity=0.052 Sum_probs=156.7
Q ss_pred EEEEeeCCCcceeeeeeCCceeec-cceeecc---------CCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC---
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYK-VPLMLYS---------TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP--- 75 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~--- 75 (239)
.|++||+.+++....+..+..... ..+.... .....+.+++|+| ++++|++++. +.|++||+.++
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~ 142 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKA 142 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTT
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcc
Confidence 899999999987776665430000 0000000 0001278899999 8898888876 99999999988
Q ss_pred CceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCc----------------eEEEEEcCCCC
Q psy11036 76 DPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT----------------VTSLCLASGGK 139 (239)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----------------i~~i~~~~~~~ 139 (239)
+......+...+..++|+|+|+.++.+.++.|.+||+. .++.......+... +..++|+|||+
T Consensus 143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~ 221 (741)
T 2ecf_A 143 AVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLA-SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS 221 (741)
T ss_dssp SCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETT-TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred eEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecC-CCCEEEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence 44443367788999999999999999998899999998 55555443333332 47799999999
Q ss_pred EEEEEecCC---------------------------------eEEEEEccc-ceEeeee---------------------
Q psy11036 140 RLISASLDH---------------------------------HAKIYEMTL-KTVSSFT--------------------- 164 (239)
Q Consensus 140 ~l~~~~~d~---------------------------------~i~i~d~~~-~~~~~~~--------------------- 164 (239)
+|++++.|+ .|.+||+.+ .....+.
T Consensus 222 ~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~ 301 (741)
T 2ecf_A 222 AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLS 301 (741)
T ss_dssp CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEE
T ss_pred EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEE
Confidence 999988765 788888764 2211110
Q ss_pred --------cceeEEEEEccCCCEEEEEEecccC----cEEEEEEccCCCeEEEEcCCceEEEEEcc-CCeeeEEec-CCC
Q psy11036 165 --------GGLDVCIWDMLGGGKLLHKFTCHHK----TVTSLCLASGGKRLISASLDHHAKIYEMV-NFSPVHTLD-YPS 230 (239)
Q Consensus 165 --------~~~~i~~~d~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~-~~~ 230 (239)
....|.+||+.+. +....+..+.. .+..++|+|||+++++++.||.++||.+. +++ ...+. +..
T Consensus 302 ~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~ 379 (741)
T 2ecf_A 302 FQRQSRDQKKLDLVEVTLASN-QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNW 379 (741)
T ss_dssp EEEEETTSSEEEEEEEETTTC-CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSS
T ss_pred EEEecccCCeEEEEEEECCCC-ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecce
Confidence 1345888998764 44444444443 34688999999999999999988888765 344 55555 556
Q ss_pred Ceeee-EecC
Q psy11036 231 PVLSI-DVSM 239 (239)
Q Consensus 231 ~v~~~-~~sp 239 (239)
.+.++ +|+|
T Consensus 380 ~v~~~~~~s~ 389 (741)
T 2ecf_A 380 SVDELLAVDE 389 (741)
T ss_dssp CEEEEEEEET
T ss_pred EEEeEeEEeC
Confidence 77776 4876
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=7e-23 Score=172.47 Aligned_cols=218 Identities=11% Similarity=0.055 Sum_probs=158.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCC---CeEEEEEecCCCCEEEEeeCC---------CeEEEEeC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQD---YVRAGTVSPVSSDIVISGSYD---------KTVNVYDT 72 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d---------g~v~vw~~ 72 (239)
+.||.|++||+.+++....+..|. . .|.+++|+| ++++|++++.+ +.+.+||+
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~--------------~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKK--------------IESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTT--------------TTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred eCCCCEEEEECCCCcEEEEecccc--------------ccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEEC
Confidence 357999999999998887777765 3 489999999 89999888764 78889999
Q ss_pred CCCCceeee---cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCce------------------EE
Q psy11036 73 RSPDPVMSV---NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV------------------TS 131 (239)
Q Consensus 73 ~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i------------------~~ 131 (239)
.+++..... .+...+..++|+|+|+.++.++++.|.+||+. .++.......+...+ .+
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHV-GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSS-SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECC-CCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 988762222 23345889999999999999998999999998 555555554443333 78
Q ss_pred EEEcCCCCEEEEEecC-CeEEEEEcc-cc-----eEeee--------ecceeEEEEEccCCCEEEEEEecc------cCc
Q psy11036 132 LCLASGGKRLISASLD-HHAKIYEMT-LK-----TVSSF--------TGGLDVCIWDMLGGGKLLHKFTCH------HKT 190 (239)
Q Consensus 132 i~~~~~~~~l~~~~~d-~~i~i~d~~-~~-----~~~~~--------~~~~~i~~~d~~~~~~~~~~~~~h------~~~ 190 (239)
++|+|||+.|++++.| +.+.+|++. .. .+..+ .....+.+||+.+.. ....+..+ ...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccce
Confidence 9999999999988765 467777754 00 00000 112368999987643 23334433 567
Q ss_pred EEEEEEccCCCeEEEEc----CCceEEEEEccCCeeeEEec--CCCCee----eeEecC
Q psy11036 191 VTSLCLASGGKRLISAS----LDHHAKIYEMVNFSPVHTLD--YPSPVL----SIDVSM 239 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~s----~d~~i~iwd~~~~~~~~~~~--~~~~v~----~~~~sp 239 (239)
+..++|||||++|++.+ .+..|++||+.+++....+. +...+. +++|||
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 315 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK 315 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC
Confidence 89999999999987764 34689999999998766554 333333 778876
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=3.6e-21 Score=148.58 Aligned_cols=195 Identities=14% Similarity=0.107 Sum_probs=154.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeeecCC-
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSPDPVMSVNHG- 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~~~- 84 (239)
++.|.+||..+++.+..+... ..+..++|+| +++ ++++...++.|.+||..+++.+..+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 131 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND---------------LKPFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDD 131 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES---------------SCCCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCC
T ss_pred CccEEEEcCCCCeEEEEEecC---------------CCcceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCC
Confidence 789999999999988888765 4467899999 566 5566666899999999999887777321
Q ss_pred -C--------CEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 85 -S--------PVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 85 -~--------~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
. .+.+++|+|+++.++++. ++.|.+||+. .++....+..+...+..++|+|+++++++++.++.|.+
T Consensus 132 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~ 210 (353)
T 3vgz_A 132 RKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG-NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELIT 210 (353)
T ss_dssp CCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT-TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEE
T ss_pred CccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC-CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEE
Confidence 1 278899999999777665 5889999998 78888877756666889999999999999999999999
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEEEe----cccCcEEEEEEccCCCeEEEEc-CCceEEEEEccCCeeeEEec
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT----CHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~ 227 (239)
||+. ..+....+. ++...+..++|+|++++++.++ .++.|.+||..+++.+..+.
T Consensus 211 ~d~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 211 IDTA--------------------DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EETT--------------------TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EECC--------------------CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9987 233333333 2455688899999999776655 45999999999999998888
Q ss_pred CCCCeeeeEecC
Q psy11036 228 YPSPVLSIDVSM 239 (239)
Q Consensus 228 ~~~~v~~~~~sp 239 (239)
...+ ..++|+|
T Consensus 271 ~~~~-~~~~~s~ 281 (353)
T 3vgz_A 271 APES-LAVLFNP 281 (353)
T ss_dssp CSSC-CCEEEET
T ss_pred cCCC-ceEEECC
Confidence 5444 5677765
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.4e-21 Score=150.23 Aligned_cols=220 Identities=9% Similarity=0.122 Sum_probs=153.2
Q ss_pred CCCCCCEEEEeeCC-Cc--ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC-CeEEEEeCC--CCC
Q psy11036 3 HDLPILIVALWDIP-SE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD-KTVNVYDTR--SPD 76 (239)
Q Consensus 3 ~~~~dg~i~vwd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~v~vw~~~--~~~ 76 (239)
.++.++.|++||++ ++ +.+..+. +. ..+.+++|+| ++++|++++.+ +.|++|++. +++
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVD-VP--------------GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEE-CS--------------SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEe-cC--------------CCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCc
Confidence 34678999999985 33 2333333 43 6788999999 78878777776 999999997 555
Q ss_pred c--eeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccC--CCeEEEEEeccCCceEEEEEcCCCCEEEEEe-cCCe
Q psy11036 77 P--VMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG--GGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHH 149 (239)
Q Consensus 77 ~--~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~--~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~ 149 (239)
. +..+.....+..++|+|+++++++++ ++.|.+||+.. ..+....+.. ...+.+++|+|+++++++++ .++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~ 152 (343)
T 1ri6_A 74 LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDR 152 (343)
T ss_dssp EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCE
Confidence 3 23444445889999999999887665 68899999951 2334444443 34588999999999888877 8999
Q ss_pred EEEEEccc-ceEe-----ee------------------------ecceeEEEEEccCC-C--EEEEEEec----c--cCc
Q psy11036 150 AKIYEMTL-KTVS-----SF------------------------TGGLDVCIWDMLGG-G--KLLHKFTC----H--HKT 190 (239)
Q Consensus 150 i~i~d~~~-~~~~-----~~------------------------~~~~~i~~~d~~~~-~--~~~~~~~~----h--~~~ 190 (239)
|.+||+.. ..+. .+ .....+.+||+... + ........ + ...
T Consensus 153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 99999872 2111 11 12345889998531 2 12222221 1 235
Q ss_pred EEEEEEccCCCeEE-EEcCCceEEEEEcc----CCeeeEEecCCCCeeeeEecC
Q psy11036 191 VTSLCLASGGKRLI-SASLDHHAKIYEMV----NFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 191 v~~~~~s~~~~~l~-s~s~d~~i~iwd~~----~~~~~~~~~~~~~v~~~~~sp 239 (239)
+..++|+|++++|+ ++..++.|++||+. +.+.+..+.....+.+++|+|
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 286 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECT
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECC
Confidence 67899999998876 55589999999998 345566666555688899986
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.9e-22 Score=160.35 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=123.5
Q ss_pred CCeEEEEEecCCCCEEE----EeeCCCeEEEEeCCCC--------Cce---eee-cCCCCEEEEEEecC-CcEEEEeC-C
Q psy11036 43 DYVRAGTVSPVSSDIVI----SGSYDKTVNVYDTRSP--------DPV---MSV-NHGSPVESVLCLPS-GGIFVTGG-G 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~----s~~~dg~v~vw~~~~~--------~~~---~~~-~~~~~v~~~~~~~~-~~~l~~~~-~ 104 (239)
..|.+++|+| ++++|+ +|+.|+.|++||+.++ +++ ..+ .|...|.+++|+|+ +.++++++ |
T Consensus 93 ~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 93 FPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 6799999999 788888 8899999999998654 222 222 47899999999997 78888887 8
Q ss_pred CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEE
Q psy11036 105 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF 184 (239)
Q Consensus 105 ~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 184 (239)
+.|++||++ .+........|...|.+++|+|+|++|++|+.||.|++||++++....+... . ...
T Consensus 172 g~v~iwD~~-~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~-----------~---~~~ 236 (434)
T 2oit_A 172 GSIAVLQVT-ETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCP-----------P---FYE 236 (434)
T ss_dssp SCEEEEEES-SSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCC-----------T---TCC
T ss_pred CeEEEEEcC-CCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCC-----------c---ccC
Confidence 999999998 5566666677899999999999999999999999999999872222222000 0 000
Q ss_pred ecccCcEEEEEEccCCCeEEEE-cCCc------eEEEEEccCC
Q psy11036 185 TCHHKTVTSLCLASGGKRLISA-SLDH------HAKIYEMVNF 220 (239)
Q Consensus 185 ~~h~~~v~~~~~s~~~~~l~s~-s~d~------~i~iwd~~~~ 220 (239)
..|...|.+++|++++.++++. +.|| .+++|++.+.
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1233479999999998887543 3443 3899999764
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=2.7e-21 Score=148.93 Aligned_cols=216 Identities=10% Similarity=0.036 Sum_probs=158.5
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDI-VISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
.+.++.|++||+.+++.+..+..+.. ..+..++|+| +++. ++++..++.|.+||+.+++....+.
T Consensus 17 ~~~~~~v~~~d~~~~~~~~~~~~~~~-------------~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTVYKSCVMPDK-------------FGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp EETTTEEEEEETTTTEEEEEEECSSC-------------CSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eCCCCeEEEEECCCCcEEEEEecCCC-------------CCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45689999999999998888775520 2577999999 6664 5566678999999999988776664
Q ss_pred CC-------CCEEEEEEecCCcEEEEeC-C------------CcEEEEEccCC--CeEEEEEeccCCceEEEEEcCCCCE
Q psy11036 83 HG-------SPVESVLCLPSGGIFVTGG-G------------LDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKR 140 (239)
Q Consensus 83 ~~-------~~v~~~~~~~~~~~l~~~~-~------------~~i~~~d~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~ 140 (239)
.. ..+..++|+|+|++++++. + +.|.+||+... .+.+..+. +...+.+++|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 22 2378899999999998887 3 89999999721 22233444 334688999999999
Q ss_pred EEEEecCCeEEEEEcc-cceEeeeecce-----------------------------------------------eEEEE
Q psy11036 141 LISASLDHHAKIYEMT-LKTVSSFTGGL-----------------------------------------------DVCIW 172 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~-~~~~~~~~~~~-----------------------------------------------~i~~~ 172 (239)
+++++ +.|.+||+. ++.+..+.... ....+
T Consensus 161 l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 55553 449999998 55554442110 01124
Q ss_pred EccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 173 DMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 173 d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
|..+.......+..+...+..++|+| ++++++++ ++.|.+||+.+++.+..+.....+.+++|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 304 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK 304 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECS
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECC
Confidence 55544444444445566788999999 99999888 8999999999999999888777788999986
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.6e-20 Score=143.87 Aligned_cols=200 Identities=12% Similarity=0.187 Sum_probs=144.6
Q ss_pred CCEEEEeeCCCcce-eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC---eEEEEeCCCCCceeeec
Q psy11036 7 ILIVALWDIPSEAQ-VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK---TVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~v~vw~~~~~~~~~~~~ 82 (239)
++.|++||+.+++. ...+..+. .+..+++|+| ++++++++..++ .|.+||+.+++.+..+.
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQ--------------SSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECS--------------SCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCceeEEecccCC--------------CCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEE
Confidence 68999999999887 67777665 5555599999 788888655553 89999999998888777
Q ss_pred CCCCEEEEEEecCCcEEEEeC--CCc-EEEEEccCCCeEE---EEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG--GLD-VCIWDMLGGGKLL---HKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEM 155 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~--~~~-i~~~d~~~~~~~~---~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~ 155 (239)
......+++|+|+|++++++. ++. +.+|++...+... ............++|+|+|++++++ ..++.|.+||+
T Consensus 126 ~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 126 IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 677789999999998666654 478 9999997444332 1222344567999999999966554 46899999999
Q ss_pred c-cce---Eeee----------------------ecceeEEEEEccCCCEE--EEEEecc----cC---cEEEEEEccCC
Q psy11036 156 T-LKT---VSSF----------------------TGGLDVCIWDMLGGGKL--LHKFTCH----HK---TVTSLCLASGG 200 (239)
Q Consensus 156 ~-~~~---~~~~----------------------~~~~~i~~~d~~~~~~~--~~~~~~h----~~---~v~~~~~s~~~ 200 (239)
. ++. +..+ .+...+.+||..+. +. +..+..+ .. ....++|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 284 (331)
T 3u4y_A 206 QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMALNKTE 284 (331)
T ss_dssp SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEECTTS
T ss_pred CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC-ceeeecccccccccCCCCcccccceEECCCC
Confidence 8 554 4443 12445889998763 33 3333322 12 22458999999
Q ss_pred CeEEEE-cCCceEEEEEccCCee
Q psy11036 201 KRLISA-SLDHHAKIYEMVNFSP 222 (239)
Q Consensus 201 ~~l~s~-s~d~~i~iwd~~~~~~ 222 (239)
++|+++ ..++.|.+||+.....
T Consensus 285 ~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 285 TKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp SEEEEEETTTTEEEEEETTSCEE
T ss_pred CEEEEecCCCCcEEEEEecCCcc
Confidence 988655 5567999999977554
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1e-20 Score=145.33 Aligned_cols=216 Identities=13% Similarity=0.112 Sum_probs=150.3
Q ss_pred CCEEEEeeCC--Ccc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCC---CCCce
Q psy11036 7 ILIVALWDIP--SEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTR---SPDPV 78 (239)
Q Consensus 7 dg~i~vwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~---~~~~~ 78 (239)
++.|.+|+++ +++ .+..+..+ ..+..++|+| +++++++++ .++.|.+||+. +.+..
T Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 59 EFRVLAYRIAPDDGALTFAAESALP---------------GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEECS---------------SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred CCeEEEEEecCCCCceeeccccccC---------------CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 3899999987 454 33344433 4678999999 677665555 58899999994 33344
Q ss_pred eeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEE----EEec-cCCceEEEEEcCCCCEEEEEe-cCCeE
Q psy11036 79 MSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLH----KFTC-HHKTVTSLCLASGGKRLISAS-LDHHA 150 (239)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~----~~~~-~~~~i~~i~~~~~~~~l~~~~-~d~~i 150 (239)
..+.....+.+++|+|+++.+++++ ++.|.+||+...++... .... ....+..++|+|+++++++++ .++.|
T Consensus 123 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i 202 (343)
T 1ri6_A 123 DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV 202 (343)
T ss_dssp EEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 4455556789999999999877775 69999999984254332 2232 344788999999999776555 78999
Q ss_pred EEEEccc---ce-----Ee---------------ee-----------ecceeEEEEEccC---CCEEEEEEecccCcEEE
Q psy11036 151 KIYEMTL---KT-----VS---------------SF-----------TGGLDVCIWDMLG---GGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 151 ~i~d~~~---~~-----~~---------------~~-----------~~~~~i~~~d~~~---~~~~~~~~~~h~~~v~~ 193 (239)
.+|+++. +. +. .+ .+++.+.+||+.. ..+.+..+..+.. +..
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~ 281 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRG 281 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCC
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cce
Confidence 9999841 10 11 01 1244588999873 2344555555444 889
Q ss_pred EEEccCCCeEEEEc-CCceEEEEEc--cCCe--eeEEecCCCCeeeeEecC
Q psy11036 194 LCLASGGKRLISAS-LDHHAKIYEM--VNFS--PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 194 ~~~s~~~~~l~s~s-~d~~i~iwd~--~~~~--~~~~~~~~~~v~~~~~sp 239 (239)
++|+|+|++|++++ .++.|.+|++ .+++ .+..+.......+++|.|
T Consensus 282 ~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 282 FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp EEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 99999999888877 6899999955 4663 455666656777888764
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=9.2e-21 Score=145.23 Aligned_cols=208 Identities=9% Similarity=0.055 Sum_probs=148.1
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee------------CCCeEEEEeCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS------------YDKTVNVYDTR 73 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------------~dg~v~vw~~~ 73 (239)
.++.|++||+.+++.+..+..... ..+...+.+++|+| ++++++++. .++.|.+||+.
T Consensus 54 ~~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~ 123 (337)
T 1pby_B 54 KSESLVKIDLVTGETLGRIDLSTP---------EERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123 (337)
T ss_dssp TTTEEEEEETTTCCEEEEEECCBT---------TEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred CCCeEEEEECCCCCeEeeEEcCCc---------ccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECC
Confidence 468999999999988877664210 00002566899999 787887775 57999999999
Q ss_pred CCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCC-----
Q psy11036 74 SPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH----- 148 (239)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~----- 148 (239)
+++....+.....+.+++|+|++++++++ ++.|.+||+. .++....+..+... ..+.|+|+++.++..+.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~-~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 124 TLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPE-AGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMAT 200 (337)
T ss_dssp TTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETT-TTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEE
T ss_pred CCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECC-CCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceee
Confidence 88887777666678889999999988887 6889999998 67776666544311 1236777776555443322
Q ss_pred -------------------eEEEEEcc-cceE-------------eee--------ecceeEEEEEccCCCEEEEEEecc
Q psy11036 149 -------------------HAKIYEMT-LKTV-------------SSF--------TGGLDVCIWDMLGGGKLLHKFTCH 187 (239)
Q Consensus 149 -------------------~i~i~d~~-~~~~-------------~~~--------~~~~~i~~~d~~~~~~~~~~~~~h 187 (239)
.|.+||+. ++.. ..+ .++..+.+||+.+ .+.+..+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~-~~~~~~~~~- 278 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEK-NASIKRVPL- 278 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTT-TEEEEEEEC-
T ss_pred eeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCC-CcCcceecC-
Confidence 35677766 2221 011 1234577888765 555555554
Q ss_pred cCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 188 HKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 188 ~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
...+.+++|+|+|++|++++.++.|++||+.+++.+..+..
T Consensus 279 ~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 34578999999999999999999999999999999988873
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=5.2e-20 Score=141.76 Aligned_cols=191 Identities=12% Similarity=0.094 Sum_probs=134.4
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC------------CeEEEEeCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD------------KTVNVYDTR 73 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------------g~v~vw~~~ 73 (239)
.++.|++||+.+++.+..+..+... ......+..++|+| +++++++++.+ +.|.+||+.
T Consensus 63 ~~~~i~~~d~~t~~~~~~~~~~~~~--------~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 63 HYGDIYGIDLDTCKNTFHANLSSVP--------GEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCST--------TEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred CCCcEEEEeCCCCcEEEEEEccccc--------ccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 4689999999999887777643200 00003377899999 78888888765 899999998
Q ss_pred CCCc---eeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccC------------------------
Q psy11036 74 SPDP---VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH------------------------ 126 (239)
Q Consensus 74 ~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------------ 126 (239)
+++. +..+.+...+.+++|+|+++ +++++ +.|.+||+. +++....+..+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~-~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
T 1jmx_B 134 DGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG-PDIYKMDVK-TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 210 (349)
T ss_dssp GGGGBCCSEEEECCSSCCCEEECTTSC-EEEES-SSEEEECTT-TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred CccccceeeeccCCCcccceeECCCCc-EEEcc-CcEEEEeCC-CCceeccccccccCCccccCccceeeecCCCcceeE
Confidence 8543 33444556788999999999 55543 449999997 566665554321
Q ss_pred --------------------------------------------CceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEe
Q psy11036 127 --------------------------------------------KTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVS 161 (239)
Q Consensus 127 --------------------------------------------~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 161 (239)
..+..++|+| ++++++++ ++.|.+||+.
T Consensus 211 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~----- 283 (349)
T 1jmx_B 211 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLK----- 283 (349)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETT-----
T ss_pred EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECc-----
Confidence 1234455566 66666665 6666666665
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCC
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSP 231 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 231 (239)
..+.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+..++.++.
T Consensus 284 ---------------~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~ 337 (349)
T 1jmx_B 284 ---------------QRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG 337 (349)
T ss_dssp ---------------TTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSS
T ss_pred ---------------cCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecCCC
Confidence 2454444443 34567899999999998888899999999999999999885543
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=8.5e-21 Score=165.77 Aligned_cols=204 Identities=12% Similarity=0.011 Sum_probs=151.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEe-cCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS-PVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
++.|++||+...+ +..+..+.... ......+...+.+++|+ | +++.|++++ ++.+.+|++.+++......+..
T Consensus 264 ~~~i~~~d~~~~~-l~~l~~~~~~~---~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~ 337 (1045)
T 1k32_A 264 GGSIYIFNPDTEK-IEKIEIGDLES---PEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLR 337 (1045)
T ss_dssp TTEEEEECTTTCC-EEECCCCCCCB---CCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECSCCSC
T ss_pred CCEEEEecCCceE-eeeeccCcccc---cccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEccCCCc
Confidence 7899999984443 33554421000 00000011468899999 9 788887777 7899999998776554335666
Q ss_pred -CEEEEEEecCCcEEEEeC-CCcEE-EEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEee
Q psy11036 86 -PVESVLCLPSGGIFVTGG-GLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162 (239)
Q Consensus 86 -~v~~~~~~~~~~~l~~~~-~~~i~-~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 162 (239)
.+..++|+ +|+.++.++ ++.+. +|++. .++. ..+..|...+..++|+|+|++|++++.++.|++||+.
T Consensus 338 ~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~-~~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~------ 408 (1045)
T 1k32_A 338 IRYVRRGGD-TKVAFIHGTREGDFLGIYDYR-TGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE------ 408 (1045)
T ss_dssp EEEEEECSS-SEEEEEEEETTEEEEEEEETT-TCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT------
T ss_pred ceEEeeeEc-CCCeEEEEECCCceEEEEECC-CCCc-eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECC------
Confidence 89999999 999888887 46677 88986 4443 3444778899999999999999999999999999987
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC----------ceEEEEEccCCeeeEEecCCCCe
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD----------HHAKIYEMVNFSPVHTLDYPSPV 232 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d----------~~i~iwd~~~~~~~~~~~~~~~v 232 (239)
.++......+|...+..++|+|||++|++++.+ +.|++||+.+++......+...+
T Consensus 409 --------------tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~ 474 (1045)
T 1k32_A 409 --------------TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 474 (1045)
T ss_dssp --------------TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBE
T ss_pred --------------CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCccc
Confidence 344555556788889999999999999888764 48999999998843333366778
Q ss_pred eeeEecC
Q psy11036 233 LSIDVSM 239 (239)
Q Consensus 233 ~~~~~sp 239 (239)
.+++|+|
T Consensus 475 ~~~~~sp 481 (1045)
T 1k32_A 475 YAPAFDA 481 (1045)
T ss_dssp EEEEECT
T ss_pred CCceEcC
Confidence 8899987
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=4.9e-19 Score=136.61 Aligned_cols=200 Identities=14% Similarity=0.141 Sum_probs=136.4
Q ss_pred CCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCCC-CC--ceee
Q psy11036 7 ILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTRS-PD--PVMS 80 (239)
Q Consensus 7 dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~-~~--~~~~ 80 (239)
++.|++||+.+++ .+..+..+. ..+..++|+| ++++|++++ .++.+.+|++.. +. .+..
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~--------------~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPG--------------TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEES--------------CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred CceEEEEEecCCcEEEeeeeecCC--------------CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence 6899999997665 334444454 6788999999 788777776 789999999963 32 2222
Q ss_pred ecCC----------CCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE--EEEecc-CCceEEEEEcCCCCEEEE-Ee
Q psy11036 81 VNHG----------SPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL--HKFTCH-HKTVTSLCLASGGKRLIS-AS 145 (239)
Q Consensus 81 ~~~~----------~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~-~~~i~~i~~~~~~~~l~~-~~ 145 (239)
+... ..+.+++|+|+++++++.. ++.|.+|++...++.. ..+..+ ......++|+|+|+++++ ..
T Consensus 127 ~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 127 VQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp EECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred eecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 2221 2488999999999555554 6889999997334322 222222 336788999999996665 55
Q ss_pred cCCeEEEEEccc--ceEeeeecceeEEEEEccCCCEEEEEEeccc------CcEEEEEEccCCCeE-EEEcCCceEEEEE
Q psy11036 146 LDHHAKIYEMTL--KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH------KTVTSLCLASGGKRL-ISASLDHHAKIYE 216 (239)
Q Consensus 146 ~d~~i~i~d~~~--~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~------~~v~~~~~s~~~~~l-~s~s~d~~i~iwd 216 (239)
.++.|.+|+++. ..+ .....+.... ..+..++|+|||++| ++...++.|.+|+
T Consensus 207 ~~~~v~v~~~~~~~g~~------------------~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGAF------------------TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp TTTEEEEEEEETTTTEE------------------EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEEecCCCCce------------------EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 688999998871 111 1111222211 458899999999987 5566789999999
Q ss_pred cc---CCeeeEEecC-CCCeeeeEecC
Q psy11036 217 MV---NFSPVHTLDY-PSPVLSIDVSM 239 (239)
Q Consensus 217 ~~---~~~~~~~~~~-~~~v~~~~~sp 239 (239)
+. +.+.+..+.. ...+.+++|+|
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 269 VTADGHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp ECGGGCEEEEEEEECSSSCCCEEEECT
T ss_pred ECCCCcEEEeEEEecCCCCcCeEEECC
Confidence 96 3355566653 55688999987
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.3e-22 Score=168.37 Aligned_cols=221 Identities=12% Similarity=0.060 Sum_probs=150.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---------CCeEEEEeCCCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---------DKTVNVYDTRSPD 76 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---------dg~v~vw~~~~~~ 76 (239)
.|+.|++||+.+++....+..+.. ....+.+++|+| ++++|++++. ++.|++||+.+++
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~ 101 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTM-----------KSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGE 101 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHH-----------HTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCCEEEEEcCCCcEEEEEccccc-----------cccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCc
Confidence 578999999999988777766540 001488999999 8898888776 7899999999887
Q ss_pred ceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEE-eccCCce-----------------EEEEEcCCC
Q psy11036 77 PVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF-TCHHKTV-----------------TSLCLASGG 138 (239)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i-----------------~~i~~~~~~ 138 (239)
.+........+..++|+|+|+.|+.+.++.|++|++. .++..... .++...+ .+++|+|||
T Consensus 102 ~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~-~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG 180 (719)
T 1z68_A 102 FVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRP-GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG 180 (719)
T ss_dssp ECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESST-TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS
T ss_pred cccceecCcccccceECCCCCEEEEEECCeEEEEeCC-CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC
Confidence 6321222356889999999999999999999999997 44443322 2222222 489999999
Q ss_pred CEEEEEecC-CeEEEEEcc--c----ceEeee--------ecceeEEEEEccCCCE----EE---EEEecccCcEEEEEE
Q psy11036 139 KRLISASLD-HHAKIYEMT--L----KTVSSF--------TGGLDVCIWDMLGGGK----LL---HKFTCHHKTVTSLCL 196 (239)
Q Consensus 139 ~~l~~~~~d-~~i~i~d~~--~----~~~~~~--------~~~~~i~~~d~~~~~~----~~---~~~~~h~~~v~~~~~ 196 (239)
++|++++.| +.+.+|.+. . .....+ .....+.+||+.+... .+ ..+.+|...+..++|
T Consensus 181 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (719)
T 1z68_A 181 KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTW 260 (719)
T ss_dssp SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEE
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEE
Confidence 999998765 444555432 0 001111 1233588899876432 11 112357778999999
Q ss_pred ccCCCeEEEEcCC----ceEEEEE----ccCCeeeEEe-----cCCCCee-----eeEecC
Q psy11036 197 ASGGKRLISASLD----HHAKIYE----MVNFSPVHTL-----DYPSPVL-----SIDVSM 239 (239)
Q Consensus 197 s~~~~~l~s~s~d----~~i~iwd----~~~~~~~~~~-----~~~~~v~-----~~~~sp 239 (239)
+||++++++.... ..|.+|| ..+++....+ .+...+. .++|+|
T Consensus 261 SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 321 (719)
T 1z68_A 261 VTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY 321 (719)
T ss_dssp SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT
T ss_pred eCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC
Confidence 9998887774422 3588899 7777765544 2445555 777876
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=5.6e-20 Score=154.54 Aligned_cols=215 Identities=14% Similarity=0.095 Sum_probs=148.3
Q ss_pred CCCCCC------CCEEEEeeCCC-----cceeeeeeCCce--eeccceeeccCCCCCeEEEEEecCCCCEEEEee-----
Q psy11036 1 MSHDLP------ILIVALWDIPS-----EAQVSTFTNHTT--IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----- 62 (239)
Q Consensus 1 fs~~~~------dg~i~vwd~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----- 62 (239)
|||||+ ++.|++||+.+ ++.......+.. ..+.+ .+......+.+++|+| ++++|++++
T Consensus 128 ~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~ 204 (706)
T 2z3z_A 128 FSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA--VHQREFGIEKGTFWSP-KGSCLAFYRMDQSM 204 (706)
T ss_dssp ECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC--CGGGCTTCCCSEEECT-TSSEEEEEEEECTT
T ss_pred CCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc--hhhhhcCCCceEEECC-CCCEEEEEEECCCC
Confidence 567764 68999999988 776655544430 00000 0000112358999999 788888887
Q ss_pred ----------------------------CCCeEEEEeCCCCCceeee---cCCCCEEEEEEecCCcEEEEeC-CC-----
Q psy11036 63 ----------------------------YDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGG-GL----- 105 (239)
Q Consensus 63 ----------------------------~dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~----- 105 (239)
.+..|.+||+.+++..... .+...+..++|+|+|+.++++. ++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 4468999999988755443 3556789999999999888865 43
Q ss_pred cEEEEEccCCC-eEEEEEec-cCC---ceEEEEEcC--CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCC
Q psy11036 106 DVCIWDMLGGG-KLLHKFTC-HHK---TVTSLCLAS--GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG 178 (239)
Q Consensus 106 ~i~~~d~~~~~-~~~~~~~~-~~~---~i~~i~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~ 178 (239)
.|.+||+. ++ ........ +.. .+..++|+| +|++++++..|+.++||.++ ..+
T Consensus 285 ~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~-------------------~~~ 344 (706)
T 2z3z_A 285 KVNAYDAE-TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD-------------------TTG 344 (706)
T ss_dssp EEEEEETT-TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE-------------------TTS
T ss_pred EEEEEECC-CCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE-------------------CCC
Confidence 79999998 55 33322222 222 246789999 99999999999998888765 113
Q ss_pred EEEEEEecccCcEEE-EEEccCCCeEEEE-cCCc----eEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 179 KLLHKFTCHHKTVTS-LCLASGGKRLISA-SLDH----HAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~-~~~s~~~~~l~s~-s~d~----~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
..+..+..|...+.. ++|+|+++.|+.+ +.++ .|..||+.+++ +..+.+...+.+++|||
T Consensus 345 ~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~sp 410 (706)
T 2z3z_A 345 RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSP 410 (706)
T ss_dssp CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECT
T ss_pred CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECC
Confidence 334444566677776 7999999877654 4444 67777877766 55566777889999987
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=7.3e-20 Score=154.55 Aligned_cols=220 Identities=11% Similarity=0.035 Sum_probs=155.6
Q ss_pred CCCCCC------CCEEEEeeCCCcc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeC
Q psy11036 1 MSHDLP------ILIVALWDIPSEA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDT 72 (239)
Q Consensus 1 fs~~~~------dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~ 72 (239)
|||||+ ++.|++||+.+++ ....+..+. ..+..++|+| ++++|+.++ ++.|++||+
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~--------------~~~~~~~~SP-DG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGE--------------GFATDAKLSP-KGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSS--------------SCEEEEEECT-TSSEEEEEE-TTEEEEEET
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCC--------------cccccccCCC-CCCEEEEEe-CCcEEEEec
Confidence 466664 3899999998873 345566676 7899999999 888888877 469999999
Q ss_pred CCCCceeeec-CCCC----------------EEEEEEecCCcEEEEeC-CC-----------------------------
Q psy11036 73 RSPDPVMSVN-HGSP----------------VESVLCLPSGGIFVTGG-GL----------------------------- 105 (239)
Q Consensus 73 ~~~~~~~~~~-~~~~----------------v~~~~~~~~~~~l~~~~-~~----------------------------- 105 (239)
.+++...... +... +..++|+|+|+.|++++ ++
T Consensus 180 ~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 180 ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 9876654442 2222 47899999999998876 43
Q ss_pred ----cEEEEEccCC-CeEEEEEe--ccCCceEEEEEcCCCCEEEEEec-----CCeEEEEEcc-cceEeee---------
Q psy11036 106 ----DVCIWDMLGG-GKLLHKFT--CHHKTVTSLCLASGGKRLISASL-----DHHAKIYEMT-LKTVSSF--------- 163 (239)
Q Consensus 106 ----~i~~~d~~~~-~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~-----d~~i~i~d~~-~~~~~~~--------- 163 (239)
.|.+||+. + ++...... .|...+..++| |||++|++++. +..|++||+. ++....+
T Consensus 260 ~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 260 NVQVKLGVISPA-EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp CCEEEEEEECSS-TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC
T ss_pred CCeeEEEEEECC-CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC
Confidence 68888987 4 44433322 46778999999 99999987764 5789999987 3322111
Q ss_pred -------e----------cceeEEEEEccCCCEEEEEEecccCcEEEE-EEccCCCeEE-EEcCCc--eEEEEEccC-Ce
Q psy11036 164 -------T----------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSL-CLASGGKRLI-SASLDH--HAKIYEMVN-FS 221 (239)
Q Consensus 164 -------~----------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~-~~s~~~~~l~-s~s~d~--~i~iwd~~~-~~ 221 (239)
. .++...+|.+...+. ...+..|...+..+ .|+|+++.|+ +++.++ .++||++.. ++
T Consensus 338 ~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred cCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 0 111234444432233 56667777888887 5999998775 555555 899999864 66
Q ss_pred eeEEecCCCCeeeeEecC
Q psy11036 222 PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 222 ~~~~~~~~~~v~~~~~sp 239 (239)
.+..+.....+.+++|||
T Consensus 417 ~~~~l~~~~~~~~~~~sp 434 (741)
T 2ecf_A 417 QPQRLSKAPGMHSASFAR 434 (741)
T ss_dssp CCEECCCSCSEEEEEECT
T ss_pred CeeecccCCCceEEEECC
Confidence 666776667788999987
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.6e-20 Score=157.88 Aligned_cols=228 Identities=11% Similarity=-0.007 Sum_probs=148.0
Q ss_pred CCCEEEEeeCCCccee-eeeeCCceeec---cceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 6 PILIVALWDIPSEAQV-STFTNHTTIYK---VPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.++ | +||+.+++.+ ..+..+..... .+..........|.+++|+| + ..++.+ .++.+++||+.+++.....
T Consensus 43 ~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp-d-~~~~~~-~~~~i~~~d~~~~~~~~l~ 117 (706)
T 2z3z_A 43 GDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG-R-GLVVLF-TQGGLVGFDMLARKVTYLF 117 (706)
T ss_dssp TTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETT-T-TEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECC-C-CeEEEE-ECCEEEEEECCCCceEEcc
Confidence 355 8 9999998873 44433320000 00000000013599999999 5 555444 4599999999988766555
Q ss_pred cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCC-----CeEEEEEeccCCc--------------eEEEEEcCCCCEEE
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGG-----GKLLHKFTCHHKT--------------VTSLCLASGGKRLI 142 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~--------------i~~i~~~~~~~~l~ 142 (239)
.+...+.+++|+|+|+.++.+.++.|.+||+. . ++.......+... +.+++|+|||++|+
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~-~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYVRNHNLYIARGG-KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEEETTEEEEEECB-CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred CCcccccCCcCCCCCCEEEEEECCeEEEEecC-cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 67778889999999999999889999999998 4 5544433333332 47899999999999
Q ss_pred EEe---------------------------------cCCeEEEEEcc-cceEee------------e------------e
Q psy11036 143 SAS---------------------------------LDHHAKIYEMT-LKTVSS------------F------------T 164 (239)
Q Consensus 143 ~~~---------------------------------~d~~i~i~d~~-~~~~~~------------~------------~ 164 (239)
+++ .+..|++||+. ++.... + .
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 987 44789999987 321111 1 0
Q ss_pred cc-----eeEEEEEccCCCEEEEEEec-ccC---cEEEEEEcc--CCCeEEEEcCCceEEEEEcc-CCeeeEEec-CCCC
Q psy11036 165 GG-----LDVCIWDMLGGGKLLHKFTC-HHK---TVTSLCLAS--GGKRLISASLDHHAKIYEMV-NFSPVHTLD-YPSP 231 (239)
Q Consensus 165 ~~-----~~i~~~d~~~~~~~~~~~~~-h~~---~v~~~~~s~--~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~-~~~~ 231 (239)
.+ ..+.+||+.+.......... +.. .+..++|+| ||+++++++.|+.++||++. +++.+..+. +...
T Consensus 277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence 01 25888998774233332222 222 235789999 99999999999999999886 667777776 4556
Q ss_pred eee-eEecC
Q psy11036 232 VLS-IDVSM 239 (239)
Q Consensus 232 v~~-~~~sp 239 (239)
+.+ ++|+|
T Consensus 357 v~~~~~~sp 365 (706)
T 2z3z_A 357 VTNFAGFDP 365 (706)
T ss_dssp EEEEEEECT
T ss_pred EEeeeEEcC
Confidence 766 78876
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=3.2e-20 Score=152.78 Aligned_cols=187 Identities=11% Similarity=0.068 Sum_probs=131.9
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC---CCeEEEEeCCC---CCceee
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY---DKTVNVYDTRS---PDPVMS 80 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~vw~~~~---~~~~~~ 80 (239)
+|+++||++++++..+....+. ..+..++|+| + +++++++. +...++|.+.. +... .
T Consensus 43 ~g~~~lw~~~~g~~~~lt~~~~--------------~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~ 105 (582)
T 3o4h_A 43 EGSVNAYLYDGGETVKLNREPI--------------NSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-R 105 (582)
T ss_dssp TTEEEEEEEETTEEEECCSSCC--------------SEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-E
T ss_pred CCceeEEEEcCCCcEeeecccc--------------cccccccCCC-C-eEEEEeccCCCCcceEEEEEeccCCCccc-c
Confidence 7999999997666554444443 4789999999 5 67776664 45556655433 3222 4
Q ss_pred ecCCCCEEEEEEecCCcE--EEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC----CeEEEEE
Q psy11036 81 VNHGSPVESVLCLPSGGI--FVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD----HHAKIYE 154 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~--l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d----~~i~i~d 154 (239)
+.....+...+|+|+++. ++++.++.+.+||+. +++...... +.. .+++|+|||++|++++.+ +.|++||
T Consensus 106 l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~-~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d 181 (582)
T 3o4h_A 106 LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALD-GGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSN 181 (582)
T ss_dssp CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEE-TTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEcc-CCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEc
Confidence 433334556788888763 444446667799998 665544443 333 789999999999988877 6677777
Q ss_pred cccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc--eEEEEEccCCeeeEEec-CCCC
Q psy11036 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH--HAKIYEMVNFSPVHTLD-YPSP 231 (239)
Q Consensus 155 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~-~~~~ 231 (239)
+. + ++ ...+..|...+..++|||||++|+++..++ .|++||+.+++.. .+. +...
T Consensus 182 ~~-------------------~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 182 LS-------------------S-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp TT-------------------T-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred CC-------------------C-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 66 1 22 234567888899999999999999888888 8999999998887 444 5556
Q ss_pred eeeeE
Q psy11036 232 VLSID 236 (239)
Q Consensus 232 v~~~~ 236 (239)
+.+++
T Consensus 240 ~~~~~ 244 (582)
T 3o4h_A 240 FSSYR 244 (582)
T ss_dssp HHHHC
T ss_pred hhhhh
Confidence 77777
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=1.3e-18 Score=134.90 Aligned_cols=215 Identities=10% Similarity=0.082 Sum_probs=136.5
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCc------
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSPDP------ 77 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~~~------ 77 (239)
..++.|.+|++.....+..+.......+............+.+++|+| +++++ ++...++.|.+|++.....
T Consensus 117 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 117 YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEK 195 (361)
T ss_dssp TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCC
T ss_pred CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccc
Confidence 457899999987544332221100000000000001113468899999 67755 4445588999998875431
Q ss_pred --------eeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE--EEEEe---ccCCceEEEEEcCCCCEEE
Q psy11036 78 --------VMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL--LHKFT---CHHKTVTSLCLASGGKRLI 142 (239)
Q Consensus 78 --------~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~--~~~~~---~~~~~i~~i~~~~~~~~l~ 142 (239)
.........+..++|+|+|++++++. ++.|.+|++. .++. +..+. .+......++|+|+|++|+
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 196 FLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA-DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp CEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE-TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred eeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec-CCceEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 11224566788999999999887766 6899999998 5543 23332 2234567999999999987
Q ss_pred EEecC--CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-CCceEEEEEc--
Q psy11036 143 SASLD--HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEM-- 217 (239)
Q Consensus 143 ~~~~d--~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~-- 217 (239)
++..+ +.|.+|+++.. ......+..+.. ...+..++|+|+|++|++++ .++.|.+|++
T Consensus 275 v~~~~~~~~i~v~~~~~~----------------~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 275 ASNRLKADGVAIFKVDET----------------NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEECSSSCEEEEEEECTT----------------TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred EECCCCCCEEEEEEEcCC----------------CCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 76665 88999988500 001122333333 45677899999999888776 6789999654
Q ss_pred cCCeeeEEec--CCCCeeeeEec
Q psy11036 218 VNFSPVHTLD--YPSPVLSIDVS 238 (239)
Q Consensus 218 ~~~~~~~~~~--~~~~v~~~~~s 238 (239)
.+++...... .-..+.+++|.
T Consensus 338 ~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 338 ATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCcEeecceeeeCCCCeEEEEc
Confidence 5677655432 33478888886
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=1.2e-19 Score=136.19 Aligned_cols=179 Identities=12% Similarity=0.030 Sum_probs=133.6
Q ss_pred EeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCC-CeEEEEEecc-CCceEEEEEcCC
Q psy11036 60 SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGG-GKLLHKFTCH-HKTVTSLCLASG 137 (239)
Q Consensus 60 s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~-~~~~~~~~~~-~~~i~~i~~~~~ 137 (239)
.++.|++|++||+.+++......+...+.+++|+|++++++++.++.|.+||+. . ++.......+ ...+.+++|+|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLA-GDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESS-SCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCC-CCCCceEeccccccccccceEECCC
Confidence 456789999999998887766678899999999999999999989999999998 5 5655555555 367899999999
Q ss_pred CCEEEEEe--cCCeEEEEEcc--cceEeee----------------------ecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 138 GKRLISAS--LDHHAKIYEMT--LKTVSSF----------------------TGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 138 ~~~l~~~~--~d~~i~i~d~~--~~~~~~~----------------------~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
+++|++++ .++...||.++ ......+ ..+..+.+|++.........+..|...+
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 175 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN 175 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc
Confidence 99999998 34555665553 2211111 1223356777644334445566778889
Q ss_pred EEEEEccCCCeEEEEc-CCceEEEEEcc-CCeeeEEec-CCCCeeeeEecC
Q psy11036 192 TSLCLASGGKRLISAS-LDHHAKIYEMV-NFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s-~d~~i~iwd~~-~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.+++|+|++++|+.++ .++.+++|++. .+..+..+. +...+.+++|+|
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 226 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP 226 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC
Confidence 9999999999887665 58999999986 455556665 566788899987
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=1.8e-17 Score=127.88 Aligned_cols=195 Identities=12% Similarity=0.137 Sum_probs=128.4
Q ss_pred CCCEEEEeeCCC-cc--eeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCcee--
Q psy11036 6 PILIVALWDIPS-EA--QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR-SPDPVM-- 79 (239)
Q Consensus 6 ~dg~i~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-~~~~~~-- 79 (239)
.++.|.+|++.. +. .+..+..... .|. .......+.+++|+| +++++++...++.|.+|++. +++...
T Consensus 106 ~~~~v~v~~~~~~g~~~~~~~~~~~~~---~p~--~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 106 HKGTAEVMKIAADGALTLTDTVQHSGH---GPR--PEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCCC---CSS--TTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEEEeCCCCCeeecceeecCCC---CCC--ccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEee
Confidence 468999999963 32 2333322110 000 000113588999999 66677777778999999998 454322
Q ss_pred ee--cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccC-CCeE--EEEEeccC------CceEEEEEcCCCCEEE-EEe
Q psy11036 80 SV--NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG-GGKL--LHKFTCHH------KTVTSLCLASGGKRLI-SAS 145 (239)
Q Consensus 80 ~~--~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~-~~~~--~~~~~~~~------~~i~~i~~~~~~~~l~-~~~ 145 (239)
.+ .....+..++|+|+|+++++++ ++.+.+|++.. .++. ...+.... ..+..++|+|+|++|+ +..
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 11 2344678899999999777654 68999999873 2332 22333222 3488899999999774 555
Q ss_pred cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC-CceEEEE--EccCCee
Q psy11036 146 LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL-DHHAKIY--EMVNFSP 222 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~~i~iw--d~~~~~~ 222 (239)
.++.|.+|++... ...+.+..+..+...+..++|+|||++|++++. ++.|.+| |..+++.
T Consensus 260 ~~~~v~v~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 260 GYNTLAVFAVTAD-----------------GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TTTEEEEEEECGG-----------------GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCEEEEEEECCC-----------------CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 6899999998610 012334444555666889999999998887765 5899999 5556765
Q ss_pred e
Q psy11036 223 V 223 (239)
Q Consensus 223 ~ 223 (239)
.
T Consensus 323 ~ 323 (347)
T 3hfq_A 323 S 323 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 156
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=2.8e-17 Score=127.66 Aligned_cols=212 Identities=9% Similarity=0.075 Sum_probs=152.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee----------CCCeEEEEeCCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----------YDKTVNVYDTRSP 75 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~vw~~~~~ 75 (239)
.|+.|++||..+++.+.++..+. .+ .++|+| ++++++++. .++.|.+||..+.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~--------------~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAF--------------NG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCE--------------EE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred ccCeEEEEECCCCeEEEEecCCC--------------CC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 47899999999999988888775 55 899999 788887765 3678999999998
Q ss_pred Cceeeec-------CCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEE-Eecc-------------------
Q psy11036 76 DPVMSVN-------HGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHK-FTCH------------------- 125 (239)
Q Consensus 76 ~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~-~~~~------------------- 125 (239)
+.+..+. +......++++|+|++++++. ++.|.+||+. ..+.+.. +...
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~-~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA-KGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT-TTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC-CCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 8887763 124567899999999999875 4789999998 6666665 3210
Q ss_pred -CCceEEEEEc---------------------------CCCCEEEEEecCCeEEEEEcc-cc--eEe-------------
Q psy11036 126 -HKTVTSLCLA---------------------------SGGKRLISASLDHHAKIYEMT-LK--TVS------------- 161 (239)
Q Consensus 126 -~~~i~~i~~~---------------------------~~~~~l~~~~~d~~i~i~d~~-~~--~~~------------- 161 (239)
.+.+..+.+. +++..++..+.++.+.++|+. .. ...
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 0111111111 222233344455667777764 10 000
Q ss_pred ---------eee----------c-----------ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCce
Q psy11036 162 ---------SFT----------G-----------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 211 (239)
Q Consensus 162 ---------~~~----------~-----------~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~ 211 (239)
.+. . ...+.+||..+ .+.+..+..+. +..++|+|||++|++++. +.
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~ 326 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN 326 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SC
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce
Confidence 010 0 23588899877 67788888766 899999999999998887 99
Q ss_pred EEEEEccCC--eeeEEe-cCCCCeeeeEecC
Q psy11036 212 AKIYEMVNF--SPVHTL-DYPSPVLSIDVSM 239 (239)
Q Consensus 212 i~iwd~~~~--~~~~~~-~~~~~v~~~~~sp 239 (239)
|.+||..++ +.+.++ ........++++|
T Consensus 327 v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp EEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred EEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 999999999 999997 4777888999887
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=2e-18 Score=145.90 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=144.3
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---------CeEEEEeCCCCCc
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---------KTVNVYDTRSPDP 77 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---------g~v~vw~~~~~~~ 77 (239)
||.|++||+.+++....+..|.. .........++|+| +++.|+.++.+ +.+.+||+.+++.
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTF---------DEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTT---------TTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCcEEEEECCCCceEEEEechhh---------hhhcccccceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Confidence 78999999999998877777751 00001234589999 78888888776 5667999999876
Q ss_pred eeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE-EeccCCce-----------------EEEEEcCCCC
Q psy11036 78 VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK-FTCHHKTV-----------------TSLCLASGGK 139 (239)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i-----------------~~i~~~~~~~ 139 (239)
.....+...+...+|+|+|+.|+.+.++.|.+|++. .++..+. ..++...+ ..+.|+|||+
T Consensus 105 ~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~ 183 (740)
T 4a5s_A 105 ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP-NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT 183 (740)
T ss_dssp CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESST-TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS
T ss_pred EEcccCCCcceeeEECCCCCEEEEEECCeEEEEECC-CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCC
Confidence 544467788999999999999999999999999997 4443321 12222222 3589999999
Q ss_pred EEEEEecCCe-EEEEEcc--cc------eEeee----ec----ceeEEEEEccC---CCE-EEEEEe------cccCcEE
Q psy11036 140 RLISASLDHH-AKIYEMT--LK------TVSSF----TG----GLDVCIWDMLG---GGK-LLHKFT------CHHKTVT 192 (239)
Q Consensus 140 ~l~~~~~d~~-i~i~d~~--~~------~~~~~----~~----~~~i~~~d~~~---~~~-~~~~~~------~h~~~v~ 192 (239)
.|+..+.|.. +.+|++. .. ....+ .| ...+.+||+.+ ... ....+. +|...+.
T Consensus 184 ~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 184 FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 9998876554 8888875 11 11111 12 23589999987 421 222333 3777899
Q ss_pred EEEEccCCCeEEEEc----CCceEEEEEccCCe
Q psy11036 193 SLCLASGGKRLISAS----LDHHAKIYEMVNFS 221 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s----~d~~i~iwd~~~~~ 221 (239)
.++|+|||+.++... .+..|++||+.+++
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 999999999766543 34579999999887
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.9e-18 Score=150.97 Aligned_cols=210 Identities=13% Similarity=0.076 Sum_probs=154.0
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeeecCCCCE
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSVNHGSPV 87 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~~~~~v 87 (239)
...+|....+.....+..|. ..+.++.|++ + .++++++.|+.+++|.+.. +.....+.....+
T Consensus 184 ~~~lw~~~~~~~~~~l~~~~--------------~~v~~~~~s~-d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~ 247 (1045)
T 1k32_A 184 RGKIWIEVNSGAFKKIVDMS--------------THVSSPVIVG-H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDY 247 (1045)
T ss_dssp CCEEEEEEETTEEEEEECCS--------------SCCEEEEEET-T-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSS
T ss_pred cCCEEEECCCCCeEECcCCC--------------CcccceEEeC-C-EEEEEEeccCceEEEEEeCCCCcceEecCCCCc
Confidence 34444332224445567777 8999999998 4 6777888889999998653 3344444333356
Q ss_pred EEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEec-----------cCCceEEEEEc-CCCCEEEEEecCCeEEEEEc
Q psy11036 88 ESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTC-----------HHKTVTSLCLA-SGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 88 ~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~i~~~-~~~~~l~~~~~d~~i~i~d~ 155 (239)
...+|+|+|+.++.+.++.|.+|++. ..+ +..+.. |...+..++|+ |+|+.|++++ ++.+.+|++
T Consensus 248 ~~~~~SpDG~~la~~~~~~i~~~d~~-~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 248 YPRHLNTDGRRILFSKGGSIYIFNPD-TEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp CEEEEEESSSCEEEEETTEEEEECTT-TCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred ceeeEcCCCCEEEEEeCCEEEEecCC-ceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 67799999999998889999999984 433 334443 34478999999 9999999887 889999998
Q ss_pred ccceEeee-------------e---------cceeEE-EEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 156 TLKTVSSF-------------T---------GGLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 156 ~~~~~~~~-------------~---------~~~~i~-~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
.......+ . ....+. +||..+.. . ..+.+|...+..++|+|||++|++++.++.|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~-~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 325 SGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-A-EKFEENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp TSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-E-EECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC-c-eEecCCccceeeeEECCCCCEEEEECCCCeE
Confidence 72211111 1 122456 77876532 2 2334777889999999999999999999999
Q ss_pred EEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
++||+.+++....+. +...+.+++|||
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred EEEECCCCceEEeccCCCCCccceEECC
Confidence 999999999887774 778899999997
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=8.1e-17 Score=124.87 Aligned_cols=201 Identities=9% Similarity=0.061 Sum_probs=130.7
Q ss_pred CCEEEEeeCCC--cce--eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCCCCCceeee
Q psy11036 7 ILIVALWDIPS--EAQ--VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 7 dg~i~vwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~~~~~~~~~ 81 (239)
++.|.+|+++. ++. +.....+. .....+++ ++++|++++ .++.+.+|++.....+..+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~--------------~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~ 136 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMG--------------ADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPA 136 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSS--------------SCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSC
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCC--------------CCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCccc
Confidence 47999998765 432 33333343 55667777 355555544 6889999999754332211
Q ss_pred ----c-----------CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe------E------EEEEeccCCceEEE
Q psy11036 82 ----N-----------HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK------L------LHKFTCHHKTVTSL 132 (239)
Q Consensus 82 ----~-----------~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~------~------~~~~~~~~~~i~~i 132 (239)
. +...+.+++|+|+|++++++. ++.|.+|++..... . ......+......+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 216 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHL 216 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEE
T ss_pred ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEE
Confidence 1 123458899999999776665 68999999874332 1 11222344567899
Q ss_pred EEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC--C
Q psy11036 133 CLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL--D 209 (239)
Q Consensus 133 ~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--d 209 (239)
+|+|+|+++++++ .++.|.+|+++...+..+ ..+.....+......++|+|||++|+++.. +
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~---------------~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYADGMLDEI---------------QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEETTEEEEE---------------EEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecCCceEEe---------------EEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 9999999887777 689999999871111111 000111223345689999999998866654 5
Q ss_pred ceEEEEEcc--CCe--eeEEecCCCCeeeeEecC
Q psy11036 210 HHAKIYEMV--NFS--PVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 210 ~~i~iwd~~--~~~--~~~~~~~~~~v~~~~~sp 239 (239)
+.|.+|++. +++ .+..+.....+.+++|+|
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~sp 315 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITP 315 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEECSSCCCEEEECT
T ss_pred CEEEEEEEcCCCCcEEEeeEecCCCCCceEEECC
Confidence 899999995 454 455555555788899987
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=1.1e-18 Score=143.74 Aligned_cols=166 Identities=11% Similarity=0.081 Sum_probs=121.9
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-C----CcEEEEEccCCCeE
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-G----LDVCIWDMLGGGKL 118 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~----~~i~~~d~~~~~~~ 118 (239)
.+...+|+|++...+++.+.++.+.+||+.+++......+.. .+++|+|+|+.+++++ + ..|.+||+. +++.
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~-~g~~ 187 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS-SGGL 187 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETT-TCCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC-CCCc
Confidence 355678888444444444445556699999887655544333 7899999999999766 4 569999987 4443
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE-
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDH--HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC- 195 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~- 195 (239)
..+..|...+..++|+|||+.|+++..++ .|++||+. +++.. .+..|...+..++
T Consensus 188 -~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~--------------------~~~~~-~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 188 -RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR--------------------DGSVE-DLELPSKDFSSYRP 245 (582)
T ss_dssp -EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT--------------------TCCEE-ECCCSCSHHHHHCC
T ss_pred -eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC--------------------CCcEE-EccCCCcChhhhhh
Confidence 46778888999999999999999888888 78888877 22333 4455665565556
Q ss_pred -------EccCCCeEEEEcCCceEEEEEccCCeeeEEecCCCCeeeeEec
Q psy11036 196 -------LASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238 (239)
Q Consensus 196 -------~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~s 238 (239)
|+|||.++++++.|+.+++|++ ++.+. ...+.+.+++|+
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s 291 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW 291 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec
Confidence 9999998999999999999999 66654 233566777664
No 161
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=1.6e-19 Score=152.04 Aligned_cols=172 Identities=7% Similarity=0.010 Sum_probs=128.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCC---CEEEEEEecCCcEEEEeCC----------CcEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGS---PVESVLCLPSGGIFVTGGG----------LDVC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~---~v~~~~~~~~~~~l~~~~~----------~~i~ 108 (239)
..+.+++|+| +++++++ +.||+|++||+.+++....+. +.. .+.+++|+|+|++++++.+ +.+.
T Consensus 17 ~~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 4467899999 7777765 789999999999998877774 332 4899999999999988862 6788
Q ss_pred EEEccCCCeEEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 109 IWDMLGGGKLLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
+||+. +++. ..+. .|...+..++|+|||+.|+.++. +.|++||+.+ ++......
T Consensus 95 ~~d~~-~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~--------------------g~~~~~~~ 151 (723)
T 1xfd_A 95 LSKIP-HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG--------------------KQAIRVVS 151 (723)
T ss_dssp EEESS-SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS--------------------SCCEEEEC
T ss_pred EEECC-CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC--------------------CceEEEec
Confidence 99998 5544 3333 34445889999999999999876 7899998871 11111112
Q ss_pred cccC------------------cEEEEEEccCCCeEEEEcCCc----------------------------------eEE
Q psy11036 186 CHHK------------------TVTSLCLASGGKRLISASLDH----------------------------------HAK 213 (239)
Q Consensus 186 ~h~~------------------~v~~~~~s~~~~~l~s~s~d~----------------------------------~i~ 213 (239)
.+.. .+.+++|||||++|++++.|+ .|+
T Consensus 152 ~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~ 231 (723)
T 1xfd_A 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLH 231 (723)
T ss_dssp CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEE
T ss_pred CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEE
Confidence 2121 237899999999999887543 899
Q ss_pred EEEccCCeeeEEecC-------CCCeeeeEecC
Q psy11036 214 IYEMVNFSPVHTLDY-------PSPVLSIDVSM 239 (239)
Q Consensus 214 iwd~~~~~~~~~~~~-------~~~v~~~~~sp 239 (239)
+||+.+++....+.. ...+.+++|||
T Consensus 232 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp 264 (723)
T 1xfd_A 232 VIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT 264 (723)
T ss_dssp EEESSSSCCCEECCCCCCGGGSSEEEEEEEESS
T ss_pred EEECCCCceeEEeeCCccCCCccceeEEEEEeC
Confidence 999999886566652 45788999987
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=2.6e-16 Score=122.34 Aligned_cols=198 Identities=13% Similarity=0.124 Sum_probs=133.2
Q ss_pred CCCEEEEeeCC-CcceeeeeeC----CceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-CCCeEEEEeCC-CCCce
Q psy11036 6 PILIVALWDIP-SEAQVSTFTN----HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-YDKTVNVYDTR-SPDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~vw~~~-~~~~~ 78 (239)
.+|.+.+|+++ +++....+.. +. ..+.+++|+| ++++++++. .++.|++|++. +++..
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~--------------~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQEN--------------TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTT--------------CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCC--------------CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 47889999987 4655444432 33 6789999999 777777655 46799999998 67643
Q ss_pred --eeec---CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccC-CCeEE---EEEec-------cCC------ceEEEE-
Q psy11036 79 --MSVN---HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG-GGKLL---HKFTC-------HHK------TVTSLC- 133 (239)
Q Consensus 79 --~~~~---~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~-~~~~~---~~~~~-------~~~------~i~~i~- 133 (239)
..+. +...+..++|+|+|++++++. ++.|.+|+++. +++.. ..+.. |.. .+..++
T Consensus 182 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 261 (365)
T 1jof_A 182 LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCA 261 (365)
T ss_dssp EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEE
T ss_pred EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEE
Confidence 2232 356799999999999888776 58899998752 23332 22221 122 478999
Q ss_pred EcCCCCEEEEEecCC------eEEEEEcccceEeeeecceeEEEEEccCCCEEEE---EEecccCcEEEEEEcc---CCC
Q psy11036 134 LASGGKRLISASLDH------HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLH---KFTCHHKTVTSLCLAS---GGK 201 (239)
Q Consensus 134 ~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~h~~~v~~~~~s~---~~~ 201 (239)
|+|||++|+++..+. .|.+|+++ ..++... ....+...+..++|+| ||+
T Consensus 262 ~spdG~~l~v~~~~~~~~~~~~i~v~~~~-------------------~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 262 LTFSGKYMFASSRANKFELQGYIAGFKLR-------------------DCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp ECTTSSEEEEEEEESSTTSCCEEEEEEEC-------------------TTSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred ECCCCCEEEEECCCCCCCCCCeEEEEEEC-------------------CCCCEEEeeeeeecCCCCcccceecCCCcCCC
Confidence 999999888776533 78888875 0122211 1233444566789999 899
Q ss_pred eEEEEcC-CceEEEEEccCCee--eEEecCCCC--eeeeEe
Q psy11036 202 RLISASL-DHHAKIYEMVNFSP--VHTLDYPSP--VLSIDV 237 (239)
Q Consensus 202 ~l~s~s~-d~~i~iwd~~~~~~--~~~~~~~~~--v~~~~~ 237 (239)
+|++++. ++.|.+|++..... +..+..+.+ +..+.|
T Consensus 323 ~l~v~~~~~~~v~v~~~~~~~l~~~~~~~~~~p~~~~~~~~ 363 (365)
T 1jof_A 323 WMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIW 363 (365)
T ss_dssp EEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEE
T ss_pred EEEEEEcCCCeEEEEEEchhhCceeeEEEcCCCcceeeeEe
Confidence 9998876 48999999876532 234444444 455554
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=3.8e-17 Score=127.74 Aligned_cols=214 Identities=9% Similarity=-0.018 Sum_probs=142.8
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCE
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPV 87 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v 87 (239)
.|++||+.+++.......+. ..+..++|+| +++.|+.++.++.|++||+.+++...... +...+
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~--------------~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~ 125 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRG--------------DNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWV 125 (388)
T ss_dssp EEEEEETTTCEEEECCCSSC--------------BCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEE
T ss_pred eEEEEeCCCCceEEeeeCCC--------------CCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcc
Confidence 58999999988877766665 4555678999 88999999999999999999988766553 33334
Q ss_pred EEE--EEecCCcEEEEe----------------------C-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCEE
Q psy11036 88 ESV--LCLPSGGIFVTG----------------------G-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRL 141 (239)
Q Consensus 88 ~~~--~~~~~~~~l~~~----------------------~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l 141 (239)
... .++|+++.++.. . +..|.+||+. +++ ...+..+...+..++|+| +|+.|
T Consensus 126 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-~g~-~~~l~~~~~~~~~~~~sp~dg~~l 203 (388)
T 3pe7_A 126 GYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK-TGE-STVILQENQWLGHPIYRPYDDSTV 203 (388)
T ss_dssp EEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT-TCC-EEEEEEESSCEEEEEEETTEEEEE
T ss_pred cccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC-CCc-eEEeecCCccccccEECCCCCCEE
Confidence 333 348899988742 1 3678999997 554 344555677889999999 99998
Q ss_pred EEEecC------CeEEEEEcccceEee--------------e-------------ecce--eEEEEEccCCCE-EEEEEe
Q psy11036 142 ISASLD------HHAKIYEMTLKTVSS--------------F-------------TGGL--DVCIWDMLGGGK-LLHKFT 185 (239)
Q Consensus 142 ~~~~~d------~~i~i~d~~~~~~~~--------------~-------------~~~~--~i~~~d~~~~~~-~~~~~~ 185 (239)
+....+ ..|.++|..+..... + .+.. .+.+||+.+... .+..+.
T Consensus 204 ~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 204 AFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEEC
T ss_pred EEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCC
Confidence 887764 377777765221111 1 1111 288888876432 223333
Q ss_pred cccCc---EEEEEEccCCCeEEEE---------cCCceEEEEEccCCeeeEEecCCC-----------CeeeeEecC
Q psy11036 186 CHHKT---VTSLCLASGGKRLISA---------SLDHHAKIYEMVNFSPVHTLDYPS-----------PVLSIDVSM 239 (239)
Q Consensus 186 ~h~~~---v~~~~~s~~~~~l~s~---------s~d~~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp 239 (239)
++... ...+.|+|||+.|+.. ..+..|++||+.+++......+.. .+.+++|+|
T Consensus 284 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sp 360 (388)
T 3pe7_A 284 ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTP 360 (388)
T ss_dssp CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCC
Confidence 21111 1113699999988754 456789999999887644444544 477888886
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=7.2e-17 Score=125.51 Aligned_cols=202 Identities=11% Similarity=0.087 Sum_probs=130.8
Q ss_pred EEEEeeCC-CcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC--EEEEee-------------CCCeEEEEeC
Q psy11036 9 IVALWDIP-SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD--IVISGS-------------YDKTVNVYDT 72 (239)
Q Consensus 9 ~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~s~~-------------~dg~v~vw~~ 72 (239)
.|.+|++. +++......... . +.+..++|+| +++ +++++. .++++.+|++
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~------------~-g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~ 126 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPI------------G-GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEC------------C-SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeec------------C-CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEcc
Confidence 78999986 676543322110 0 2244588999 677 345553 6899999999
Q ss_pred C-CCCceeeec-----CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE--EEEEe--ccCCceEEEEEcCCCCE
Q psy11036 73 R-SPDPVMSVN-----HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL--LHKFT--CHHKTVTSLCLASGGKR 140 (239)
Q Consensus 73 ~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~--~~~~~--~~~~~i~~i~~~~~~~~ 140 (239)
. +++....+. +...+.+++|+|+|++++++. ++.|.+|++...++. +..+. .|...+..++|+|+|++
T Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~ 206 (365)
T 1jof_A 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE
Confidence 7 455443332 456799999999999888765 578999999622332 23333 23567899999999999
Q ss_pred EEEEec-CCeEEEEEcc---cceEeeeecceeEEEEEccCCCEEEEEE----ecccC------cEEEEE-EccCCCeEEE
Q psy11036 141 LISASL-DHHAKIYEMT---LKTVSSFTGGLDVCIWDMLGGGKLLHKF----TCHHK------TVTSLC-LASGGKRLIS 205 (239)
Q Consensus 141 l~~~~~-d~~i~i~d~~---~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~h~~------~v~~~~-~s~~~~~l~s 205 (239)
+++++. ++.|.+|+++ ++..... +.+..+ .+|.. .+..++ |+|||++|++
T Consensus 207 l~v~~~~~~~v~v~~~~~~~g~~~~~~---------------~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 207 LYALMEAGNRICEYVIDPATHMPVYTH---------------HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEEEE---------------EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeEEEEEEeCCCCcEEEcc---------------ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 888775 6899999875 1110000 000001 12222 588999 9999999877
Q ss_pred EcCC-c-----eEEEEEcc-CCeeeE---Eec-CCCCeeeeEecC
Q psy11036 206 ASLD-H-----HAKIYEMV-NFSPVH---TLD-YPSPVLSIDVSM 239 (239)
Q Consensus 206 ~s~d-~-----~i~iwd~~-~~~~~~---~~~-~~~~v~~~~~sp 239 (239)
++.+ . .|.+|++. +++... .+. ....+..++|+|
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 6543 2 89999996 666543 233 344566777765
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=2.3e-15 Score=112.96 Aligned_cols=201 Identities=16% Similarity=0.194 Sum_probs=141.4
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceeeec-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY-DKTVNVYDTRSPDPVMSVN- 82 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~vw~~~~~~~~~~~~- 82 (239)
..++.|++||.+ ++.+..+..... ...+...+.++++.+.+++++++... ++.|++|| .+++.+..+.
T Consensus 48 ~~~~~i~~~d~~-g~~~~~~~~~~~--------~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~ 117 (286)
T 1q7f_A 48 TNNHRIQIFDKE-GRFKFQFGECGK--------RDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGA 117 (286)
T ss_dssp GGGTEEEEECTT-SCEEEEECCBSS--------STTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECT
T ss_pred CCCCEEEEECCC-CcEEEEecccCC--------CcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecC
Confidence 346788999876 555555532110 00011568899995326666666543 78999999 5677666663
Q ss_pred -CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~ 158 (239)
....+..++++|+++++++.. ++.|.+||.. ++.+..+. .+...+..++++++|+.+++...++.|++||..++
T Consensus 118 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 195 (286)
T 1q7f_A 118 TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ 195 (286)
T ss_dssp TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC
T ss_pred ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC
Confidence 345789999999999877766 6889999964 55555554 34456899999999998888778899999997733
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEec--ccCcEEEEEEccCCCeEEEEcCCc-eEEEEEccCCeeeEEecC---CCCe
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDH-HAKIYEMVNFSPVHTLDY---PSPV 232 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~---~~~v 232 (239)
. +..+.. +...+..++++++|+++++...++ .|.+||. +++.+..+.. ...+
T Consensus 196 ~---------------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 196 Y---------------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp E---------------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred E---------------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 2 222222 235688999999999988888886 9999995 5677776652 2246
Q ss_pred eeeEecC
Q psy11036 233 LSIDVSM 239 (239)
Q Consensus 233 ~~~~~sp 239 (239)
.+++++|
T Consensus 254 ~~i~~~~ 260 (286)
T 1q7f_A 254 FDVALMD 260 (286)
T ss_dssp EEEEEET
T ss_pred eeEEECC
Confidence 7888875
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=4.7e-15 Score=111.27 Aligned_cols=176 Identities=16% Similarity=0.243 Sum_probs=129.7
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---C
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---H 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---~ 83 (239)
++.|++|| .+++.+..+.... ...+.+++++| +++++++...++.|.+|+.. ++....+. +
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~-------------~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 162 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATI-------------LQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH 162 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTT-------------CSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTT
T ss_pred CCEEEEEC-CCCcEEEEecCcc-------------CCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc
Confidence 57788888 4666666554321 05688999999 77888887788999999964 55555552 3
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEecc--CCceEEEEEcCCCCEEEEEecCC-eEEEEEcccce
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCH--HKTVTSLCLASGGKRLISASLDH-HAKIYEMTLKT 159 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~l~~~~~d~-~i~i~d~~~~~ 159 (239)
...+..++++|+++++++.. ++.|.+||.. ++.+..+..+ ...+..++++++|+++++...++ .|.+||..++
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~- 239 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ- 239 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-
Confidence 45689999999998777766 6899999984 5556666543 35789999999999888887776 9999986633
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEeccc--CcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHH--KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
.+..+..+. ..+.+++++|+|+++++ +.|+.|++|++....+
T Consensus 240 --------------------~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 240 --------------------LISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp --------------------EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred --------------------EEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 233333322 34778999999987777 5699999999866543
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=141.01 Aligned_cols=177 Identities=7% Similarity=-0.003 Sum_probs=118.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHG 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~ 84 (239)
++.|++||+++++.+..... . ..+..++|+| +++.|+.+. ++.|++|++.+++..... ++.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l-~--------------~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~ 151 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNEL-P--------------RPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE 151 (719)
T ss_dssp EEEEEEEETTTTEECCSSCC-C--------------SSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBT
T ss_pred ceEEEEEECCCCccccceec-C--------------cccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc
Confidence 58999999998876311111 2 4578899999 788888775 789999999988765433 222
Q ss_pred CCE-----------------EEEEEecCCcEEEEeC-C-C---------------------------------cEEEEEc
Q psy11036 85 SPV-----------------ESVLCLPSGGIFVTGG-G-L---------------------------------DVCIWDM 112 (239)
Q Consensus 85 ~~v-----------------~~~~~~~~~~~l~~~~-~-~---------------------------------~i~~~d~ 112 (239)
..+ .+++|+|+|+.|+.++ + + .|.+||+
T Consensus 152 ~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 152 NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred CCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 222 4899999999999876 3 1 6789998
Q ss_pred cCCCeEE---E-----EEeccCCceEEEEEcCCCCEEEEEecC----CeEEEEE----cccceEeeeecceeEEEEEccC
Q psy11036 113 LGGGKLL---H-----KFTCHHKTVTSLCLASGGKRLISASLD----HHAKIYE----MTLKTVSSFTGGLDVCIWDMLG 176 (239)
Q Consensus 113 ~~~~~~~---~-----~~~~~~~~i~~i~~~~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~~~~~i~~~d~~~ 176 (239)
. .++.. . .+..|...+..++|+||++.+++.... ..|.+|| +.
T Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~-------------------- 290 (719)
T 1z68_A 232 T-YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ-------------------- 290 (719)
T ss_dssp S-CHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS--------------------
T ss_pred C-CCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC--------------------
Confidence 7 44321 1 123577789999999998777664432 2366667 44
Q ss_pred CCEEEEEE----ecccCcEE-----EEEEccCCCeEEE--EcCCc--eEEEEEccCCe
Q psy11036 177 GGKLLHKF----TCHHKTVT-----SLCLASGGKRLIS--ASLDH--HAKIYEMVNFS 221 (239)
Q Consensus 177 ~~~~~~~~----~~h~~~v~-----~~~~s~~~~~l~s--~s~d~--~i~iwd~~~~~ 221 (239)
+++....+ ..|...+. .+.|+|||+.|+. +..+| .|.+||+.+++
T Consensus 291 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 291 TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 12211111 34556565 7899999996554 44555 57777877665
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=5.9e-15 Score=113.15 Aligned_cols=197 Identities=12% Similarity=0.134 Sum_probs=143.5
Q ss_pred CCEEEEeeCCCcceeeeeeC-CceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeeec--
Q psy11036 7 ILIVALWDIPSEAQVSTFTN-HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVMSVN-- 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~~~~-- 82 (239)
++.|.+||..+++.+..+.. +. .....++++| +++++++...++.|++|+..... .+..+.
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~--------------~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~ 132 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLF--------------YLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRS 132 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTC--------------SSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBT
T ss_pred CCcEEEEECCCCeEEeccCCCcc--------------CCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEeccc
Confidence 36799999988887766542 32 5788999999 78888888889999999986442 444442
Q ss_pred --------CCCCEEEEEEec-CCcEEEEeC--CCcEEEEEccCCCeEEEEEecc----------CCceEEEEEcCC-CCE
Q psy11036 83 --------HGSPVESVLCLP-SGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH----------HKTVTSLCLASG-GKR 140 (239)
Q Consensus 83 --------~~~~v~~~~~~~-~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~----------~~~i~~i~~~~~-~~~ 140 (239)
+-.....++++| ++.++++.+ ++.|.+|+. .+..+..+... ......++++|+ +..
T Consensus 133 ~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~--~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 133 MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP--SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT--TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC--CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 223688999999 888888874 688999995 56666666422 234789999998 777
Q ss_pred EEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc------CCCeEEEEcCCceEE
Q psy11036 141 LISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS------GGKRLISASLDHHAK 213 (239)
Q Consensus 141 l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~------~~~~l~s~s~d~~i~ 213 (239)
+++...++.|++|+.. ++.+..+.. ..+...+..++++| +|+.+++.+.+..|+
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~-------------------~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKH-------------------ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECC-------------------TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEec-------------------cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEE
Confidence 7777788999999987 443333310 23455677888888 444344444556899
Q ss_pred EEEccCCeeeEEec----CCCCeeeeEecC
Q psy11036 214 IYEMVNFSPVHTLD----YPSPVLSIDVSM 239 (239)
Q Consensus 214 iwd~~~~~~~~~~~----~~~~v~~~~~sp 239 (239)
+|+..+++.+..+. +...+.+++++|
T Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 272 VMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp EEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred EEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 99999999999874 445688888876
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=4.2e-16 Score=130.08 Aligned_cols=170 Identities=6% Similarity=-0.066 Sum_probs=118.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCC----------CeEEEEeCCC------CCceeee-cCCCCEEEEEEecCCcEEEEeC-C
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD----------KTVNVYDTRS------PDPVMSV-NHGSPVESVLCLPSGGIFVTGG-G 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d----------g~v~vw~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~ 104 (239)
..+..++|+| +++.|+.++.+ ..|++||+.+ ++..... .+...+..++|+|+|+.|+.++ +
T Consensus 130 ~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 130 LRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp EEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred ccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 6788999999 78888888776 5899999987 5554444 4556778899999999998766 4
Q ss_pred --------CcEEEEEccCCC---eEEEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEEEEcccceEeeeecceeEEE
Q psy11036 105 --------LDVCIWDMLGGG---KLLHKFTCHHKTVTSLCLASGGKRLISASLDH--HAKIYEMTLKTVSSFTGGLDVCI 171 (239)
Q Consensus 105 --------~~i~~~d~~~~~---~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~i~~ 171 (239)
..|.+||+...+ +.......+...+..++|+|||++++++..++ .|.+||+.......+
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l-------- 280 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL-------- 280 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES--------
T ss_pred CCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec--------
Confidence 369999997324 34444445578899999999999888887888 444455431111111
Q ss_pred EEccCCCEEEEEEecccC--------cEEEEEEccCCCeEEEEcCCceEEEE--EccCCeeeEEec-CCCCeeee
Q psy11036 172 WDMLGGGKLLHKFTCHHK--------TVTSLCLASGGKRLISASLDHHAKIY--EMVNFSPVHTLD-YPSPVLSI 235 (239)
Q Consensus 172 ~d~~~~~~~~~~~~~h~~--------~v~~~~~s~~~~~l~s~s~d~~i~iw--d~~~~~~~~~~~-~~~~v~~~ 235 (239)
...+.. .+..++|+|+++++++++. +.++|| |+.+++ +..+. +...+..+
T Consensus 281 ------------~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~ 341 (662)
T 3azo_A 281 ------------CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT 341 (662)
T ss_dssp ------------SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE
T ss_pred ------------ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE
Confidence 111111 1456889999999999998 999999 555555 55555 44455555
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=8.1e-15 Score=112.35 Aligned_cols=185 Identities=15% Similarity=0.100 Sum_probs=135.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCC------------------------CeEEEEeCCCCCceeeec--CCCCEEEEEEecCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD------------------------KTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSG 96 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d------------------------g~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~ 96 (239)
+.+.+++++| +++++++...+ ++|.+||..+++....+. +-.....++++|+|
T Consensus 24 ~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 24 GQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp SCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 7799999999 78888888777 479999999898877664 34578999999999
Q ss_pred cEEEEeC-CCcEEEEEccCCCeEEEEE---------eccCCceEEEEEcC-CCCEEEEEe-cCCeEEEEEcccceEeeee
Q psy11036 97 GIFVTGG-GLDVCIWDMLGGGKLLHKF---------TCHHKTVTSLCLAS-GGKRLISAS-LDHHAKIYEMTLKTVSSFT 164 (239)
Q Consensus 97 ~~l~~~~-~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~i~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~ 164 (239)
+++++.. ++.|.+|+.......+..+ ..+......++++| ++..+++.+ .++.|++|+..+..+..+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 9877777 6899999986221245555 23444689999999 788888876 6899999996644433331
Q ss_pred cceeEEEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCCeeeEEec---CCCCeeeeEecC
Q psy11036 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNFSPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 165 ~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~sp 239 (239)
..+ ... ....++-.....++++|+ ++++++...++.|++|+..+++.+..+. ....+.+++|+|
T Consensus 183 ~~g---------~~~--~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 183 EES---------SGS--SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp EEC---------CSS--SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred cCC---------CCC--CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 000 000 000012234789999998 7888888899999999999899998885 445788888876
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=4e-14 Score=108.44 Aligned_cols=202 Identities=10% Similarity=0.051 Sum_probs=136.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC----CeEEEEeCCCCCceeee
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD----KTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~v~vw~~~~~~~~~~~ 81 (239)
.++.|++||.++++.......+. ..+.+++++| +++++++...+ +.|.+||..+++....+
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFVSHK--------------ANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEECSS--------------SSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCCEEEEEeCCCCcEEEEeeCCC--------------CCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 45788888887777554443444 7799999999 77887777666 68999999877654333
Q ss_pred ---cCCCCEEEEEEecCCcEEEEeCC-------CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEE-EecCCeE
Q psy11036 82 ---NHGSPVESVLCLPSGGIFVTGGG-------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS-ASLDHHA 150 (239)
Q Consensus 82 ---~~~~~v~~~~~~~~~~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~-~~~d~~i 150 (239)
.....+..++++|+++++++... +.|..++.. .++ +..+......+..++|+|+++.++. .+.++.|
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i 206 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRL 206 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC-CCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeE
Confidence 24457899999999998887653 334455543 223 3333333456789999999986654 4557899
Q ss_pred EEEEcc--cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 151 KIYEMT--LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 151 ~i~d~~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
.+||++ +..+..+. ......+.++ ..+..++++++|+++++...++.|.+||. +++.+..+..
T Consensus 207 ~~~d~~~~g~~~~~~~-------------~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFG-------------ATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp EEEEECTTSSSEEEEE-------------EEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred EEEEecCCCcCccccc-------------ceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 999985 22221110 0011111222 45778999999998888888899999998 5777777764
Q ss_pred CC-------CeeeeEecC
Q psy11036 229 PS-------PVLSIDVSM 239 (239)
Q Consensus 229 ~~-------~v~~~~~sp 239 (239)
+. .+.+++|+|
T Consensus 272 ~~~~~g~~~~~~~~~~~~ 289 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIP 289 (333)
T ss_dssp TTGGGTCSCBCCEEEECT
T ss_pred CCCccccccCcceEEECC
Confidence 33 578888865
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=1.3e-15 Score=127.20 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=125.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeE---------EEEEe--cCCCCE-EEEee-CCCeEEEEe
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVR---------AGTVS--PVSSDI-VISGS-YDKTVNVYD 71 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~-l~s~~-~dg~v~vw~ 71 (239)
+.++...||....+.....+..+. ..+. ...|+ | +++. |+.++ .+..|.+++
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~~~~~~~l~~~~ 108 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESALPAP--------------WNVRNRVFEYSGFPWAGVPRP-AGGPLLVFTHFGDQRLYAFE 108 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESSCTT--------------CCBCCCGGGTCCCCEEEECCS-SSSCEEEEEBTTTCCEEEEC
T ss_pred ccCCcEEEEEECCCCCcceeCCCC--------------ccccccccccCCccceeeeec-CCCeEEEEEECCCCeEEEEc
Confidence 346788888865444455666554 4444 55566 8 5655 55443 456777777
Q ss_pred CC--C-CCceeeec-----CCCCEEEEEEecCCcEEEEeC-C----------CcEEEEEccCC-----CeEEEEEe-ccC
Q psy11036 72 TR--S-PDPVMSVN-----HGSPVESVLCLPSGGIFVTGG-G----------LDVCIWDMLGG-----GKLLHKFT-CHH 126 (239)
Q Consensus 72 ~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~-~----------~~i~~~d~~~~-----~~~~~~~~-~~~ 126 (239)
+. . ++...... +...+..++|+|+|+.|+.++ + ..|.+||+... ++ ...+. .+.
T Consensus 109 ~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~ 187 (662)
T 3azo_A 109 PDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAH 187 (662)
T ss_dssp TTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCS
T ss_pred CCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCC
Confidence 76 3 44333223 456788999999999998877 4 47999999731 33 34454 556
Q ss_pred CceEEEEEcCCCCEEEEEecCC--------eEEEEEcccceEeeeecceeEEEEEccCCC---EEEEEEecccCcEEEEE
Q psy11036 127 KTVTSLCLASGGKRLISASLDH--------HAKIYEMTLKTVSSFTGGLDVCIWDMLGGG---KLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 127 ~~i~~i~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~h~~~v~~~~ 195 (239)
..+..++|+|||++|+.++.++ .|++||+. ..+ +.......|...+..+.
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~-------------------~~g~~~~~~~l~~~~~~~~~~~~ 248 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT-------------------EDGRFADTRTLLGGPEEAIAQAE 248 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC-------------------TTSCEEEEEEEEEETTBCEEEEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC-------------------CCCcccccEEeCCCCCceEcceE
Confidence 7788899999999999887654 45555544 223 33334445577899999
Q ss_pred EccCCCeEEEEcCCc--eEEEEEccCCeeeEEec
Q psy11036 196 LASGGKRLISASLDH--HAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~ 227 (239)
|+|||+++++++.++ .|.+||+.+++......
T Consensus 249 ~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 249 WAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred ECCCCeEEEEECCCCCeEEEEEECCCCceeeccc
Confidence 999999888888888 67777776776554433
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=1.2e-14 Score=108.65 Aligned_cols=183 Identities=15% Similarity=0.162 Sum_probs=141.2
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH 83 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~ 83 (239)
++.++.|++||.++++.+.++..+.. ..+.++++.| ++++++ +.++.|..||. +++.+..+..
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~-------------~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKG-------------WECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTT-------------CCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCcc-------------CCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 45789999999999999999987630 2578999999 788888 34678999998 8888888843
Q ss_pred --CCCEEEEEEecCCcEEEEeCC--CcEEEEEccCCCeEEEEEec------cCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 84 --GSPVESVLCLPSGGIFVTGGG--LDVCIWDMLGGGKLLHKFTC------HHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 84 --~~~v~~~~~~~~~~~l~~~~~--~~i~~~d~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
...+.++.+.|+|+.+++..+ +.+..+|. .++.+.++.. +......++..++|+++++...++.|..|
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 357888999999999988663 55555554 5776666642 11244566788999999999999999999
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
|.++ +.+..+... ..+.++...++|+++++++.++.|..+|..+|+.+.++.
T Consensus 152 d~~G---------------------~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 152 APNG---------------------QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CTTS---------------------CEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CCCC---------------------CEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 9873 333344432 334567778999999999988999999999999988885
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=6.8e-14 Score=114.26 Aligned_cols=189 Identities=13% Similarity=0.039 Sum_probs=144.2
Q ss_pred CCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCC--CCCceeee
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR--SPDPVMSV 81 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~--~~~~~~~~ 81 (239)
...++.|.++|..+++.+.++... ..+..+.++| +++++++++.|+.|.+||+. +++.+..+
T Consensus 173 ~~~~~~V~viD~~t~~v~~~i~~g---------------~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 173 LRDAGQIALIDGSTYEIKTVLDTG---------------YAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp ETTTTEEEEEETTTCCEEEEEECS---------------SCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred eCCCCeEEEEECCCCeEEEEEeCC---------------CCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 345789999999999999988866 4567999999 88999999999999999996 78888777
Q ss_pred cCCCCEEEEEEe----cCCcEEEEeC--CCcEEEEEccCCCeEEEEEecc----------CC-ceEEEEEcCCCCE-EEE
Q psy11036 82 NHGSPVESVLCL----PSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH----------HK-TVTSLCLASGGKR-LIS 143 (239)
Q Consensus 82 ~~~~~v~~~~~~----~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~----------~~-~i~~i~~~~~~~~-l~~ 143 (239)
........++++ |+|++++++. ++.+.++|.. +.+.+..+... .. .+..+..++++.. ++.
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~-t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE-TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT-TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC-CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 666667899999 6999999888 6999999987 77777776532 12 5778888887654 445
Q ss_pred EecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-CCceEEEEEccCCee
Q psy11036 144 ASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMVNFSP 222 (239)
Q Consensus 144 ~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~ 222 (239)
...+|.|.++|.... ....+..+ ........+.|+|+|+++++++ .++.|.++|+.+++.
T Consensus 316 ~~~~g~v~~vd~~~~------------------~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 316 VKETGKILLVDYTDL------------------NNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp ETTTTEEEEEETTCS------------------SEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred ecCCCeEEEEecCCC------------------ccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 556688888887610 00111112 2234566889999999887655 678999999999998
Q ss_pred eEEecC
Q psy11036 223 VHTLDY 228 (239)
Q Consensus 223 ~~~~~~ 228 (239)
+..+..
T Consensus 377 ~~~i~v 382 (567)
T 1qks_A 377 VAIEDT 382 (567)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776654
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=2.3e-15 Score=115.94 Aligned_cols=182 Identities=13% Similarity=0.107 Sum_probs=122.6
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC------------------------
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD------------------------ 64 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------------------------ 64 (239)
.|++||+.+++...... +. . +..++|+| +++.|+.++.+
T Consensus 86 ~l~~~~~~~g~~~~l~~-~~--------------~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 86 EIWVADLETLSSKKILE-AK--------------N-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEEEEETTTTEEEEEEE-ES--------------E-EEEEEECT-TSSEEEEEEECCCC---------CCCC--------
T ss_pred eEEEEECCCCceEEEEc-CC--------------C-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 47888888776554433 33 5 88999999 77777766532
Q ss_pred ---CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-C------C-cEEEEEccCCCeEEEEEeccCCceEEEE
Q psy11036 65 ---KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-G------L-DVCIWDMLGGGKLLHKFTCHHKTVTSLC 133 (239)
Q Consensus 65 ---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~------~-~i~~~d~~~~~~~~~~~~~~~~~i~~i~ 133 (239)
..|.+||+.+++.+..+... .+..+.|+|+| +++++. + . ...+|.+. .++. ..+..+ ..+..+
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~-~~l~~~-~~~~~~- 222 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKE-EKMFEK-VSFYAV- 222 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEE-EEEEEE-ESEEEE-
T ss_pred CccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCce-EEeccC-cceeeE-
Confidence 57899999888763444223 78899999999 776664 2 2 45666665 4543 334434 455544
Q ss_pred EcCCCCEEEEEecCC--------eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE-EEEccCCCeEE
Q psy11036 134 LASGGKRLISASLDH--------HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS-LCLASGGKRLI 204 (239)
Q Consensus 134 ~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~-~~~s~~~~~l~ 204 (239)
+|+|+.|+.++.++ .|.+|| . ++.......+...+.. +.|+ ++ +++
T Consensus 223 -spdg~~l~~~~~~~~~~~~~~~~l~~~d-~---------------------~~~~~l~~~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 223 -DSDGERILLYGKPEKKYMSEHNKLYIYD-G---------------------KEVMGILDEVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp -EECSSCEEEEECCSSSCCCSSCEEEEEC-S---------------------SCEEESSTTCCSEEEEEEEET-TE-EEE
T ss_pred -CCCCCEEEEEEccccCCccccceEEEEC-C---------------------CceEeccccCCcccCCccEEc-Cc-EEE
Confidence 99999988877543 344444 2 2222222345567775 8898 88 888
Q ss_pred EEcCCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 205 SASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 205 s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
+++.++.++|| +.+++....+.....|.+++|+|
T Consensus 278 ~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp EEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS
T ss_pred EEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC
Confidence 88889999999 87666655555667788888876
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=8.2e-15 Score=112.29 Aligned_cols=212 Identities=9% Similarity=0.005 Sum_probs=149.1
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.++.|.+||..+++.+.++... .....+++++ ++.++++...++.|.+||..+++....+....
T Consensus 62 ~~~~v~viD~~t~~~~~~i~~~---------------~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRITGF---------------TSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEECC---------------SSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECcccEEEEEcCCC---------------CCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCC
Confidence 4689999999999998888644 5688999988 56555555488999999999988776664333
Q ss_pred ------CEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC----------
Q psy11036 86 ------PVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD---------- 147 (239)
Q Consensus 86 ------~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d---------- 147 (239)
....+++ .++..+++.. ++.|.++|+. +++....+... .....++++|+|++++++..+
T Consensus 126 ~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~-t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 126 MDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE-TDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp CCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT-TTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred ccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC-CCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 5566777 4555555542 6899999998 77777777643 345789999999977776654
Q ss_pred CeEEEEEcc-cceEeeee---------------------cceeEEEEEccCCCEEEEE-EecccCcEEEEEEcc-CCCeE
Q psy11036 148 HHAKIYEMT-LKTVSSFT---------------------GGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLAS-GGKRL 203 (239)
Q Consensus 148 ~~i~i~d~~-~~~~~~~~---------------------~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~-~~~~l 203 (239)
+.|.++|.. .+....+. ....+.++|..+....... +..+......++++| +++++
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ly 282 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVY 282 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEE
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEE
Confidence 789999987 44333321 0114667777553221111 111135688999999 56666
Q ss_pred EEE----cCCceEEEEEccCCeeeEEecCCCCeeeeEe
Q psy11036 204 ISA----SLDHHAKIYEMVNFSPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 204 ~s~----s~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~ 237 (239)
++. ..++.|.+||.. ++.+.++........++|
T Consensus 283 va~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~ 319 (328)
T 3dsm_A 283 VADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCW 319 (328)
T ss_dssp EEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEE
T ss_pred EEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEE
Confidence 666 678999999998 999999886556666665
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=1.6e-16 Score=134.35 Aligned_cols=180 Identities=8% Similarity=0.023 Sum_probs=123.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCC-----CEEEEEEecCCcEEEEeCC----------Cc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGS-----PVESVLCLPSGGIFVTGGG----------LD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~-----~v~~~~~~~~~~~l~~~~~----------~~ 106 (239)
....+++|+| ++++++++ |++|++||+.+++....+. +.. ....+.|+|+|+.++.+.+ +.
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3456899999 78888876 8999999999998776663 322 2245889999999988874 56
Q ss_pred EEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 107 i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
+.+||+. +++. ..+..|...+...+|+|||+.||.+ .++.|++|++.+.....++. .+.....+.+
T Consensus 94 ~~~~d~~-~~~~-~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~-----------~g~~~~~~~g 159 (740)
T 4a5s_A 94 YDIYDLN-KRQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITW-----------TGKEDIIYNG 159 (740)
T ss_dssp EEEEETT-TTEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCS-----------CCBTTTEEES
T ss_pred EEEEECC-CCcE-EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcC-----------CCCccceecC
Confidence 7899997 5553 4466677889999999999999988 57899999987222222211 0111111122
Q ss_pred cc---------CcEEEEEEccCCCeEEEEcCC------------------------------------ceEEEEEccC--
Q psy11036 187 HH---------KTVTSLCLASGGKRLISASLD------------------------------------HHAKIYEMVN-- 219 (239)
Q Consensus 187 h~---------~~v~~~~~s~~~~~l~s~s~d------------------------------------~~i~iwd~~~-- 219 (239)
+. +....+.|||||+.||.++.| ..|++||+.+
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 22 122358899999999887532 1588899988
Q ss_pred -Ce--eeEEec-------CCCCeeeeEecC
Q psy11036 220 -FS--PVHTLD-------YPSPVLSIDVSM 239 (239)
Q Consensus 220 -~~--~~~~~~-------~~~~v~~~~~sp 239 (239)
++ ....+. +...+..++|||
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence 73 222332 445688889986
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=2.9e-14 Score=107.52 Aligned_cols=195 Identities=11% Similarity=0.082 Sum_probs=136.0
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--- 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--- 82 (239)
.++.|+.||..++ ...+..+. ..+.+++++| +++++++...++.|.+||..+++......
T Consensus 48 ~~~~i~~~~~~~~--~~~~~~~~--------------~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ--LSPEMHPS--------------HHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp GGTEEEEEETTSC--EEEEESSC--------------SSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEET
T ss_pred CCCEEEEEECCCC--eEEEECCC--------------CCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccC
Confidence 4578999998776 55666665 7799999999 78888777777899999998887544332
Q ss_pred --CCCCEEEEEEecCCcEEEEeCC----------------CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE
Q psy11036 83 --HGSPVESVLCLPSGGIFVTGGG----------------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 144 (239)
Q Consensus 83 --~~~~v~~~~~~~~~~~l~~~~~----------------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~ 144 (239)
....+..++++|+|+++++... +.-.+|.+...++ +..+..+......++|+|+++.+++.
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~s~dg~~lv~~ 189 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEECCCCCEEEEe
Confidence 1234668999999998886320 1224454442333 44455566778999999999988777
Q ss_pred ecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 145 SLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 145 ~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
+.++.|.+|++. ...+. .....+..+...+..++++++|+++++. ++.|.+|+.. ++.+
T Consensus 190 ~~~~~i~~~~~~~~g~~~-----------------~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 190 TGDNATHRYCLNARGETE-----------------YQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp TTTTEEEEEEECSSSCEE-----------------EEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred CCCCeEEEEEECCCCcCc-----------------CCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 778899999885 11110 0011112244556789999999977766 7899999986 7888
Q ss_pred EEecCCCCeeeeEec
Q psy11036 224 HTLDYPSPVLSIDVS 238 (239)
Q Consensus 224 ~~~~~~~~v~~~~~s 238 (239)
..+..+..+.+++|.
T Consensus 250 ~~~~~~~~~~~~~f~ 264 (296)
T 3e5z_A 250 GRVLTPQTTSNLCFG 264 (296)
T ss_dssp EEEECSSCCCEEEEE
T ss_pred EEEECCCCceeEEEE
Confidence 888744448888883
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=5.5e-15 Score=115.48 Aligned_cols=203 Identities=8% Similarity=-0.038 Sum_probs=132.3
Q ss_pred eeCCCcceeeeeeCCceeeccceeeccCCCCCeEE-----EEEecCCCCEEEEeeC-CC--eEEEEeCCCCCceeeec-C
Q psy11036 13 WDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRA-----GTVSPVSSDIVISGSY-DK--TVNVYDTRSPDPVMSVN-H 83 (239)
Q Consensus 13 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~s~~~-dg--~v~vw~~~~~~~~~~~~-~ 83 (239)
.|..++..+..+..+. ..... .+|+| +++.|+.++. ++ .|.+||+.+++...... +
T Consensus 15 ~~~~~g~~~~~lt~~~--------------~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~ 79 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPD--------------VTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR 79 (388)
T ss_dssp ECTTTCCEEEECSCTT--------------SCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS
T ss_pred ecCCCCcceEEecCCc--------------ccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC
Confidence 4777888888887775 55555 78999 7888877776 66 48888998887665553 4
Q ss_pred CCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEE--EcCCCCEEEEEecCCeEEEEEcccceE
Q psy11036 84 GSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLC--LASGGKRLISASLDHHAKIYEMTLKTV 160 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~--~~~~~~~l~~~~~d~~i~i~d~~~~~~ 160 (239)
...+..+.|+|+++.|+.+. ++.+.+||+. +++.......+...+.... ++|+++.++....++. +....
T Consensus 80 ~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~------~~~~~ 152 (388)
T 3pe7_A 80 GDNTFGGFLSPDDDALFYVKDGRNLMRVDLA-TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRRE------DWVPL 152 (388)
T ss_dssp CBCSSSCEECTTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGG------GCCCC
T ss_pred CCCccceEEcCCCCEEEEEeCCCeEEEEECC-CCcceeeeechhhcccccceeECCCCCeeccccccCc------ccccc
Confidence 44444678999999998888 6789999998 6666555555555554443 4889988775321100 00000
Q ss_pred ---------eeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEcCC------ceEEEEEccCCeeeE
Q psy11036 161 ---------SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISASLD------HHAKIYEMVNFSPVH 224 (239)
Q Consensus 161 ---------~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d------~~i~iwd~~~~~~~~ 224 (239)
........|.+||+.+. +. ..+..+...+..+.|+| ||+.|+..+.+ ..|.++|...++...
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g-~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTG-ES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK 230 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTC-CE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE
T ss_pred cccchhhhhhccCCcceEEEEECCCC-ce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE
Confidence 00112244666666553 22 33345567789999999 99988877653 378888876655433
Q ss_pred EecCC--CCeeeeEecC
Q psy11036 225 TLDYP--SPVLSIDVSM 239 (239)
Q Consensus 225 ~~~~~--~~v~~~~~sp 239 (239)
..... ..+..++|||
T Consensus 231 l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVP 247 (388)
T ss_dssp SCCCCTTEEEEEEEECT
T ss_pred eeeCCCCcccccceECC
Confidence 33333 2577788887
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=1.8e-14 Score=121.31 Aligned_cols=194 Identities=8% Similarity=0.022 Sum_probs=133.5
Q ss_pred CeEEEEEecCCCCEEEEeeCCC-----eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCc-----------
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDK-----TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLD----------- 106 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~----------- 106 (239)
.+..++|+| ++++|+.+..++ .|++||+.+++..........+..++|+|+|+.|+.+. ++.
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 578999999 788887655433 89999999988765332222366799999999888776 443
Q ss_pred -----EEEEEccCCCe----EEEEEeccCCceEEEEEcCCCCEEEEEec-----CCeEEEEEccc------c--eEeeee
Q psy11036 107 -----VCIWDMLGGGK----LLHKFTCHHKTVTSLCLASGGKRLISASL-----DHHAKIYEMTL------K--TVSSFT 164 (239)
Q Consensus 107 -----i~~~d~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~-----d~~i~i~d~~~------~--~~~~~~ 164 (239)
|.+|++. +++ .+.....+...+..+.|+|||++|+..+. +..|.+||+.. . ....+.
T Consensus 205 ~~~~~v~~~~l~-t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 205 NLHQKLYYHVLG-TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCEEEEEETT-SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred CCCCEEEEEECC-CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 9999997 433 22222234556789999999999888765 57899999863 2 222221
Q ss_pred -------------------------cceeEEEEEccCCCE-EEEEEecccC--cEEEEEEccCCCeEEEEcCCce--EEE
Q psy11036 165 -------------------------GGLDVCIWDMLGGGK-LLHKFTCHHK--TVTSLCLASGGKRLISASLDHH--AKI 214 (239)
Q Consensus 165 -------------------------~~~~i~~~d~~~~~~-~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~--i~i 214 (239)
....|.+||+.+... ....+..|.. .+..++|++++.++++...|+. |++
T Consensus 284 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 284 DNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 123477888766431 1233444443 6888999988888888888885 566
Q ss_pred EEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 215 YEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 215 wd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
|++.+++.+..+. +.+.+..++++|
T Consensus 364 ~~~~~g~~~~~l~~~~~~v~~~~~s~ 389 (710)
T 2xdw_A 364 HDLATGALLKIFPLEVGSVVGYSGQK 389 (710)
T ss_dssp EETTTCCEEEEECCCSSEEEEEECCT
T ss_pred EECCCCCEEEecCCCCceEEEEecCC
Confidence 7776788777776 455677777765
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.68 E-value=4.4e-15 Score=115.17 Aligned_cols=163 Identities=13% Similarity=0.037 Sum_probs=126.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-----------ceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-----------PVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d 111 (239)
..+..+++++ ...++++|+.++ +++|++...+ +.....+.. |+.++| ++.+|+++.++.|++||
T Consensus 38 ~~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLD 112 (388)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEE
T ss_pred ccccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEE
Confidence 5789999999 788999999875 6669865322 223335666 999999 88999999889999999
Q ss_pred ccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
++ ..........|..++.++.+.+. .+++++.||.+.+||+. ...... +...|
T Consensus 113 v~-sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~--------------------~~~~~~----~~~~V 165 (388)
T 1xip_A 113 LE-ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLR--------------------TKSTKQ----LAQNV 165 (388)
T ss_dssp SS-STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETT--------------------TCCEEE----EEESE
T ss_pred ch-hhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEcc--------------------CCcccc----ccCCc
Confidence 98 44455566678888988887654 38889999999999997 222221 34579
Q ss_pred EEEEEccCCCeEEEEcCCceEEEEEccCCee--eEEe------c----CCCCeeeeEecC
Q psy11036 192 TSLCLASGGKRLISASLDHHAKIYEMVNFSP--VHTL------D----YPSPVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~------~----~~~~v~~~~~sp 239 (239)
++++|||+| ++.|..||++++|+...++. .+++ . ++..|.++.|.+
T Consensus 166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~ 223 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS 223 (388)
T ss_dssp EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS
T ss_pred eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec
Confidence 999999999 67788999999999988776 5666 2 456799999864
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=3.2e-13 Score=103.42 Aligned_cols=201 Identities=9% Similarity=0.015 Sum_probs=142.1
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.++.|.++|.++++....+..... ..........+++. ++.++++...++.|.++|..+++.+.++....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n--------~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~ 84 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRAN--------GFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT 84 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHH--------SSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS
T ss_pred CCceEEEEECCCCEEhhhhHhhhc--------CcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC
Confidence 378999999999887665521100 00000346778775 46677777778999999999999988886667
Q ss_pred CEEEEEEecCCcEEEEe-CCCcEEEEEccCCCeEEEEEeccC-----CceEEEEEcCCCCEEEEEe-cCCeEEEEEcccc
Q psy11036 86 PVESVLCLPSGGIFVTG-GGLDVCIWDMLGGGKLLHKFTCHH-----KTVTSLCLASGGKRLISAS-LDHHAKIYEMTLK 158 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~-~~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~ 158 (239)
....++++++++.+++. .++.|.+||+. +.+....+.... .....+++ .+++.+++.. .++.|.++|+.
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~-- 160 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE-- 160 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT--
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC--
Confidence 88999999998655555 37999999998 777776666433 14456777 3444444433 47889999887
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCC----------ceEEEEEccCCeeeEEecC
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD----------HHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d----------~~i~iwd~~~~~~~~~~~~ 228 (239)
+.+....+.. ......++++|+|++++++..+ +.|.++|..+++....+..
T Consensus 161 ------------------t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 161 ------------------TDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp ------------------TTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred ------------------CCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 2344444333 2234678899999988877665 7999999999998888774
Q ss_pred --CCCeeeeEecC
Q psy11036 229 --PSPVLSIDVSM 239 (239)
Q Consensus 229 --~~~v~~~~~sp 239 (239)
......++|+|
T Consensus 222 ~~g~~p~~la~~~ 234 (328)
T 3dsm_A 222 KLGDWPSEVQLNG 234 (328)
T ss_dssp CTTCCCEEEEECT
T ss_pred CCCCCceeEEEec
Confidence 34788999886
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=5.8e-15 Score=115.44 Aligned_cols=178 Identities=9% Similarity=0.002 Sum_probs=116.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEE-------------------EEEecCCCCEEEEe-----e
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRA-------------------GTVSPVSSDIVISG-----S 62 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~s~-----~ 62 (239)
++.|++||+.+++....+..+. ..... ++|+| +++.++.. .
T Consensus 101 ~~~l~~~d~~~~~~~~~~~~~~--------------~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYTVDE--------------EWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTN 165 (396)
T ss_dssp TTEEEEEETTTCCEEEEEECCT--------------TEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTC
T ss_pred CCcEEEEECCCCCcEEEEeccc--------------ccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCC
Confidence 4679999998887666555443 21111 34567 55555543 4
Q ss_pred CCCeEEEEeCCCCCceeeecCCCCEEEEEEec-CCcEEEEeC-C------CcEEEEEccCCCeEEEEEecc--CCceEEE
Q psy11036 63 YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP-SGGIFVTGG-G------LDVCIWDMLGGGKLLHKFTCH--HKTVTSL 132 (239)
Q Consensus 63 ~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~------~~i~~~d~~~~~~~~~~~~~~--~~~i~~i 132 (239)
.+..|.+||+.+++......+...+..+.|+| ++..++... + ..|.+||+. .++. ..+..+ ...+..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~-~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNV-RKIKEHAEGESCTHE 243 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCC-EESSCCCTTEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC-CCce-eEeeccCCCccccce
Confidence 56789999999888766556677899999999 787666554 2 368888886 3332 233323 2357889
Q ss_pred EEcCCCCEEEEEecC-----CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEE
Q psy11036 133 CLASGGKRLISASLD-----HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISA 206 (239)
Q Consensus 133 ~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~ 206 (239)
+|+|+|+.|+.++.+ +.|++||+. + ++....... .. .. +.|+| +|++++.+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~-------------------~-g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPE-------------------T-LENEEVMVM-PP-CS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTT-------------------T-CCEEEEEEC-CS-EE-EEEECSSSSEEEEE
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECC-------------------C-CCeEEeeeC-CC-CC-CCccCCCCceEEEe
Confidence 999999988777654 347777765 2 211111111 11 22 78999 99988875
Q ss_pred c----------------CCceEEEEEccCCeeeE
Q psy11036 207 S----------------LDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 207 s----------------~d~~i~iwd~~~~~~~~ 224 (239)
+ .+..|++||+.+++...
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTBCCE
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCceEE
Confidence 4 34789999998877543
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.64 E-value=2.6e-13 Score=104.91 Aligned_cols=212 Identities=12% Similarity=0.079 Sum_probs=144.5
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee----------CCCeEEEEeCCCCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----------YDKTVNVYDTRSPD 76 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~vw~~~~~~ 76 (239)
++.|.+.|..+++.+.++.... .+ . ++++| +++.++++. .++.|.+||..+.+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~--------------~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGF--------------LP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECS--------------SC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEECCCCeEEEEEECCC--------------CC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 5799999999999999998776 65 4 99999 666665544 36789999999999
Q ss_pred ceeeecCC--------CCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEecc--------------------
Q psy11036 77 PVMSVNHG--------SPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCH-------------------- 125 (239)
Q Consensus 77 ~~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~-------------------- 125 (239)
.+..+... .....++++|+|++++++. ++.|.++|+. +++.+.++...
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~-t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE-GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC-CCcEEEEEECCCcceeecCCCceeEEECCCC
Confidence 88877321 2456799999999988875 4789999998 66655554310
Q ss_pred --------C-CceEE----------------EEEc-CCCCEEEEEecCCeEEEEEcccc---eEeee-------------
Q psy11036 126 --------H-KTVTS----------------LCLA-SGGKRLISASLDHHAKIYEMTLK---TVSSF------------- 163 (239)
Q Consensus 126 --------~-~~i~~----------------i~~~-~~~~~l~~~~~d~~i~i~d~~~~---~~~~~------------- 163 (239)
. +.+.. ..|. ++|+++ ..+.+|.|.+.|+.+. .+..+
T Consensus 200 ~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 200 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEE
T ss_pred CEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEE-EEeCCCEEEEEECCCCcceeecceecccccccccccc
Confidence 0 11100 1121 234333 3445677777776411 11000
Q ss_pred -------------------e----------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEE-cCCceE
Q psy11036 164 -------------------T----------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISA-SLDHHA 212 (239)
Q Consensus 164 -------------------~----------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~-s~d~~i 212 (239)
. ....|.+.|..+ .+.+..+.. ...+..+.+++|++ +|+++ ..++.|
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeE
Confidence 0 023467777766 444444432 23577899999997 66554 569999
Q ss_pred EEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 213 KIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.++|..+++.+.++...+..+.|.++|
T Consensus 357 sViD~~t~k~~~~i~~~~~p~~l~~s~ 383 (386)
T 3sjl_D 357 YIHDAESGEELRSVNQLGHGPQVITTA 383 (386)
T ss_dssp EEEETTTCCEEEEECCCCSSCCEEEEC
T ss_pred EEEECCCCcEEEEecCCCCCceeEECC
Confidence 999999999999999888888887765
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=1.6e-14 Score=113.01 Aligned_cols=192 Identities=9% Similarity=-0.062 Sum_probs=122.1
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSP 86 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~ 86 (239)
..|++||+.+++.......+. .....+.|+| +++.|+.++.++.|.+||+.+++...... +...
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~--------------~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 124 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKG--------------DNTFGGFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEW 124 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSC--------------BCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE
T ss_pred ceEEEEECCCCcEEEeecCCC--------------CccccceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEeccccc
Confidence 478888988877554433332 2233478999 78999888888999999999887655443 2221
Q ss_pred EEE-------------------EEEecCCcEEEEe------CCCcEEEEEccCCCeEEEEEeccCCceEEEEEcC-CCCE
Q psy11036 87 VES-------------------VLCLPSGGIFVTG------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKR 140 (239)
Q Consensus 87 v~~-------------------~~~~~~~~~l~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~ 140 (239)
... +.|+|+++.++.. .+..|.+||+. .++.... ..+...+..+.|+| +++.
T Consensus 125 ~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~-~g~~~~~-~~~~~~~~~~~~sp~dg~~ 202 (396)
T 3c5m_A 125 KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE-TGELEVI-HQDTAWLGHPIYRPFDDST 202 (396)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT-TCCEEEE-EEESSCEEEEEEETTEEEE
T ss_pred CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC-CCcEEee-ccCCcccccceECCCCCCE
Confidence 212 2456666655443 24678999997 5554433 35677889999999 7887
Q ss_pred EEEEecC------CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecc--cCcEEEEEEccCCCeEEEEcCC---
Q psy11036 141 LISASLD------HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH--HKTVTSLCLASGGKRLISASLD--- 209 (239)
Q Consensus 141 l~~~~~d------~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d--- 209 (239)
|+..+.+ ..|.+||+.+ .+ ...+..+ ...+..++|+|+|++|+.++.+
T Consensus 203 l~~~~~~~~~~~~~~l~~~d~~~--------------------~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 203 VGFCHEGPHDLVDARMWLVNEDG--------------------SN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEEECSCSSSCSCCCEEEETTS--------------------CC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred EEEEecCCCCCCCceEEEEECCC--------------------Cc-eeEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 7776543 2456666541 11 1111122 2357789999999988777544
Q ss_pred --ceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 210 --HHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 210 --~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
+.|++||+.+++.......+. .. ++|+|
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~ 291 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVMPP-CS-HLMSN 291 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEECCS-EE-EEEEC
T ss_pred ccceEEEEECCCCCeEEeeeCCC-CC-CCccC
Confidence 559999998887544333322 22 66654
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=6.2e-13 Score=101.79 Aligned_cols=174 Identities=6% Similarity=0.033 Sum_probs=120.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~ 84 (239)
.++.++.| .++....+..+. ..+.+++|+| ++++++++..++.|.+||..+++..... .+.
T Consensus 25 ~~~~~~~~---~~~~~~~~~~~~--------------~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 86 (333)
T 2dg1_A 25 SESELQTI---TAEPWLEISKKG--------------LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHK 86 (333)
T ss_dssp CGGGSCEE---ECEEEEEEESSC--------------CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSS
T ss_pred ecccCccc---ccceeEEEeccC--------------ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC
Confidence 34566666 344555566655 6789999999 7888888888999999999888765544 566
Q ss_pred CCEEEEEEecCCcEEEEeC-C----CcEEEEEccCCCeEEEEEe--ccCCceEEEEEcCCCCEEEEEec------CCeEE
Q psy11036 85 SPVESVLCLPSGGIFVTGG-G----LDVCIWDMLGGGKLLHKFT--CHHKTVTSLCLASGGKRLISASL------DHHAK 151 (239)
Q Consensus 85 ~~v~~~~~~~~~~~l~~~~-~----~~i~~~d~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~------d~~i~ 151 (239)
..+.+++++|+++++++.. + +.|.+||.. .+.....+. .+...+..++++|+|+.+++... .+.|.
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 7899999999999888776 4 589999987 444332332 23457899999999987776543 23444
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE-EEEcCCceEEEEEccC
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMVN 219 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~i~iwd~~~ 219 (239)
.+|..+ .+.. .+..+...+..++|+|+++.| ++.+.++.|.+||+.+
T Consensus 166 ~~~~~~--------------------~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 166 YVSPDF--------------------RTVT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EECTTS--------------------CCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEeCCC--------------------CEEE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 444331 1111 112223457889999999855 5556688999999963
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=1.1e-13 Score=116.34 Aligned_cols=194 Identities=15% Similarity=0.055 Sum_probs=129.0
Q ss_pred CCeEEEEEecCCCCEEE-----EeeCCCeEEEEeCCCCCce-eeecCCCCEEEEEEecCCcEEEEeC-CCc---------
Q psy11036 43 DYVRAGTVSPVSSDIVI-----SGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLD--------- 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~-----s~~~dg~v~vw~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-~~~--------- 106 (239)
..+..++|+| ++++|+ .|+.+.+|++||+.+++.. ...........++|+|+|+.|+.+. +..
T Consensus 121 ~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 121 VSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 3688999999 788887 4555678999999998865 2111111126789999999888876 444
Q ss_pred ----EEEEEccCCCe----EEEEEeccCCceEEEEEcCCCCEEEEEecCC----eEEEEEcccceEeee-----------
Q psy11036 107 ----VCIWDMLGGGK----LLHKFTCHHKTVTSLCLASGGKRLISASLDH----HAKIYEMTLKTVSSF----------- 163 (239)
Q Consensus 107 ----i~~~d~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~----------- 163 (239)
|++|++. +++ .+.....+...+..+.|+|||++|+..+.++ .|.+++........+
T Consensus 200 ~~~~v~~~~l~-t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 200 GYTTIRYHTLG-TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp GGCEEEEEETT-SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CCCEEEEEECC-CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 9999997 333 3333334556788999999999998877666 666766531111111
Q ss_pred ---------e----cceeEEEEEccCCCE--EEEEEecc-cCcEEEEEEccCCCeEEEEcCCceEEEEEcc-CCeeeEEe
Q psy11036 164 ---------T----GGLDVCIWDMLGGGK--LLHKFTCH-HKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFSPVHTL 226 (239)
Q Consensus 164 ---------~----~~~~i~~~d~~~~~~--~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~ 226 (239)
+ +...|.+||+.+... ....+..+ ...+..++++ ++.++++...|+..+||.+. +++.+..+
T Consensus 279 ~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 279 AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 1 234577788765321 12222223 4567888888 77888899999988888665 46666666
Q ss_pred cC--CCCeeeeEecC
Q psy11036 227 DY--PSPVLSIDVSM 239 (239)
Q Consensus 227 ~~--~~~v~~~~~sp 239 (239)
.. .+.+..++++|
T Consensus 358 ~~~~~~~v~~~~~s~ 372 (695)
T 2bkl_A 358 QLPGVGAASNLMGLE 372 (695)
T ss_dssp CCSSSSEECCCBSCT
T ss_pred cCCCCeEEEEeecCC
Confidence 53 45566666654
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=1.6e-13 Score=105.53 Aligned_cols=182 Identities=15% Similarity=0.146 Sum_probs=118.6
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC---C--eEEEEeCCCCCceee
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD---K--TVNVYDTRSPDPVMS 80 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g--~v~vw~~~~~~~~~~ 80 (239)
.++.|++||+.+++... + . .+..++|+| +++.|+..+.+ + .|.+|++.+++....
T Consensus 41 ~~~~l~~~d~~~~~~~~-l--~----------------~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l 100 (347)
T 2gop_A 41 YENTIVIENLKNNARRF-I--E----------------NATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKI 100 (347)
T ss_dssp EEEEEEEEETTTCCEEE-E--E----------------SCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred ccceEEEEeCCCCceEE-c--c----------------cCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEE
Confidence 36788999988776432 3 1 267899999 78888776643 3 478888887766555
Q ss_pred ecCCCCEEEEEEecCCcEEEEeC-C---------------------------CcEEEEEccCCCeEEEEEeccCCceEEE
Q psy11036 81 VNHGSPVESVLCLPSGGIFVTGG-G---------------------------LDVCIWDMLGGGKLLHKFTCHHKTVTSL 132 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~l~~~~-~---------------------------~~i~~~d~~~~~~~~~~~~~~~~~i~~i 132 (239)
..... +..++|+|+++.|+.+. + ..|.+||+. .++.+..+.. . .+..+
T Consensus 101 ~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~-~~~~~~~l~~-~-~~~~~ 176 (347)
T 2gop_A 101 LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE-SEEVIEEFEK-P-RFSSG 176 (347)
T ss_dssp EEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT-TTEEEEEEEE-E-TTCEE
T ss_pred EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC-CCeEEeeecC-C-Ccccc
Confidence 44444 99999999999888775 2 458889987 5655345544 3 78899
Q ss_pred EEcCCCCEEEEEecCC-------eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEE
Q psy11036 133 CLASGGKRLISASLDH-------HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205 (239)
Q Consensus 133 ~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 205 (239)
+|+|+| .++++..++ ...|| .+| .++.. .+..+ ..+..+ +|||++|+.
T Consensus 177 ~~spdg-~~~~~~~~~~~~~~~~~~~l~-----------------~~d---~~~~~-~l~~~-~~~~~~--spdg~~l~~ 231 (347)
T 2gop_A 177 IWHRDK-IVVNVPHREIIPQYFKFWDIY-----------------IWE---DGKEE-KMFEK-VSFYAV--DSDGERILL 231 (347)
T ss_dssp EEETTE-EEEEEECCCSSCCSSCCEEEE-----------------EEE---TTEEE-EEEEE-ESEEEE--EECSSCEEE
T ss_pred cCCCCe-EEEEEecccccccccccccEE-----------------EeC---CCceE-EeccC-cceeeE--CCCCCEEEE
Confidence 999999 777775542 22333 333 22322 22223 444444 999999887
Q ss_pred EcCC--------ceEEEEEccCCeeeEEec-CCCCeee-eEec
Q psy11036 206 ASLD--------HHAKIYEMVNFSPVHTLD-YPSPVLS-IDVS 238 (239)
Q Consensus 206 ~s~d--------~~i~iwd~~~~~~~~~~~-~~~~v~~-~~~s 238 (239)
++.+ ..|.+|| +++...... +...+.+ +.|+
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET
T ss_pred EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc
Confidence 7644 3688888 555443333 3456665 6664
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=2.4e-12 Score=97.18 Aligned_cols=197 Identities=13% Similarity=0.136 Sum_probs=132.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--- 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--- 82 (239)
..+.|+.||..+++. ..+.. . ..+.++++++ +++++++ . +..|.+||..+++......
T Consensus 33 ~~~~i~~~d~~~~~~-~~~~~-~--------------~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQV-QRVTM-D--------------APVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTTEEEEEETTTCCE-EEEEC-S--------------SCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEEEEEEECCT
T ss_pred CCCEEEEEECCCCcE-EEEeC-C--------------CceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcEEEEEecCC
Confidence 346777777766543 22322 2 6789999999 6775554 3 5679999998776433222
Q ss_pred --CCCCEEEEEEecCCcEEEEeC-C---------CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEE-EEecCCe
Q psy11036 83 --HGSPVESVLCLPSGGIFVTGG-G---------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHH 149 (239)
Q Consensus 83 --~~~~v~~~~~~~~~~~l~~~~-~---------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-~~~~d~~ 149 (239)
....+..++++|+|+++++.. . ..-.+|.+...++... +..+......++|+|+++.|+ +.+.++.
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYS 172 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCc
Confidence 123578899999999777653 1 2345666653343333 333445568999999998765 4555788
Q ss_pred EEEEEcc---cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEe
Q psy11036 150 AKIYEMT---LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226 (239)
Q Consensus 150 i~i~d~~---~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 226 (239)
|.+|++. +.. . ..+....+..+......+++.++|++.++....+.|..||..+++.+..+
T Consensus 173 i~~~~~d~~~G~~-~---------------~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 173 VDAFDYDLQTGQI-S---------------NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEEEECTTTCCE-E---------------EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred EEEEeccCCCCcc-c---------------CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 9999873 110 0 01122222334456788999999998888878889999999999999999
Q ss_pred cCC-CCeeeeEec
Q psy11036 227 DYP-SPVLSIDVS 238 (239)
Q Consensus 227 ~~~-~~v~~~~~s 238 (239)
..+ ..+++++|.
T Consensus 237 ~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 237 KLPVDKTTSCCFG 249 (297)
T ss_dssp ECSSSBEEEEEEE
T ss_pred ECCCCCceEEEEe
Confidence 855 689999986
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=3.4e-13 Score=100.12 Aligned_cols=174 Identities=7% Similarity=-0.025 Sum_probs=118.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..+.++++.+ +++++++.. ++.|.+||.......... .....+..++++|++.++++.. ++.|.+|+.. ......
T Consensus 67 ~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~ 143 (270)
T 1rwi_B 67 YQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAG-SKTQTV 143 (270)
T ss_dssp CSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTT-CCSCEE
T ss_pred CCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECC-CceeEe
Confidence 4577899999 677666655 889999998765443222 2336789999999998777665 6889999765 332222
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
........+..++++++|+.+++...++.|.+||..+. ........+...+..++++++|
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~--------------------~~~~~~~~~~~~p~~i~~d~~g 203 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN--------------------NQVVLPFTDITAPWGIAVDEAG 203 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC--------------------CEEECCCSSCCSEEEEEECTTC
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC--------------------ceEeecccCCCCceEEEECCCC
Confidence 22223346788999999987777767789999987721 1111111223567899999999
Q ss_pred CeEEEEcCCceEEEEEccCCeeeEEec-CCCCeeeeEecC
Q psy11036 201 KRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp 239 (239)
.++++...++.|.+|+........... ....+.+++++|
T Consensus 204 ~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 204 TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS 243 (270)
T ss_dssp CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT
T ss_pred CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC
Confidence 888888888999999986654333221 224677887764
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=4.7e-12 Score=98.52 Aligned_cols=208 Identities=9% Similarity=-0.024 Sum_probs=141.0
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee----------CCCeEEEEeCCCCCce
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----------YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~vw~~~~~~~~ 78 (239)
.|.++|..+++.+.++.... .+ .++++| +++.++.+. .++.|.++|..+.+.+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~--------------~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~ 110 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGF--------------LP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI 110 (373)
T ss_pred EEEEEECCCCeEEEEecCCC--------------CC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEE
Confidence 88999999999888887664 54 999999 777777664 3678999999988887
Q ss_pred eeecCC--------CCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEE-EeccCCceEEEEEcCCC-CEEEEEe
Q psy11036 79 MSVNHG--------SPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGG-KRLISAS 145 (239)
Q Consensus 79 ~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~-~~~~~~~i~~i~~~~~~-~~l~~~~ 145 (239)
..+... .....++++|+|++++++. ++.|.++| . +++.+.. +... . ++.+.|++ +.+++.+
T Consensus 111 ~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~-t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~ 184 (373)
T 2mad_H 111 ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q-GGSSDDQLLSSP-T---CYHIHPGAPSTFYLLC 184 (373)
T ss_pred EEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C-CCCEEeEEcCCC-c---eEEEEeCCCceEEEEc
Confidence 766322 2345899999999999876 36799999 7 7777766 5421 2 23344544 3455566
Q ss_pred cCCeEEEEEcccceEee----------------------------eecceeEEEEEccCCC-EEEEEEec----------
Q psy11036 146 LDHHAKIYEMTLKTVSS----------------------------FTGGLDVCIWDMLGGG-KLLHKFTC---------- 186 (239)
Q Consensus 146 ~d~~i~i~d~~~~~~~~----------------------------~~~~~~i~~~d~~~~~-~~~~~~~~---------- 186 (239)
.||.+.++|..++.... .+..+.+.+.|+.... ..+..+..
T Consensus 185 ~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 185 AQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred CCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 67777777763111100 0112346666664322 12222211
Q ss_pred ccCcEEEEEEccCCCeEEEEcC----------CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 187 HHKTVTSLCLASGGKRLISASL----------DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.......+.++|+++.|..+.. ++.|.++|..+++.+.++.......+++|+|
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~ 327 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ 327 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC
Confidence 1122344788999888776543 3589999999999999999877889999986
No 192
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.58 E-value=2.3e-12 Score=101.23 Aligned_cols=200 Identities=11% Similarity=0.065 Sum_probs=139.9
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee----------CCCeEEEEeCCCCCc
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----------YDKTVNVYDTRSPDP 77 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~vw~~~~~~~ 77 (239)
+.|.++|..+++.+.++.... .+ .++++| +++.++++. .++.|.++|..+++.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~--------------~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF--------------LP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS--------------SC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CeEEEEECCCCEEEEEEECCC--------------CC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 799999999999999998776 66 899999 566555554 467899999999998
Q ss_pred eeeecCC--------CCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEEEEEeccCC-------ceEEE-------
Q psy11036 78 VMSVNHG--------SPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLLHKFTCHHK-------TVTSL------- 132 (239)
Q Consensus 78 ~~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~-------~i~~i------- 132 (239)
+..+... .....+.++|+|++++++. ++.|.+.|+. +.+.+.++..... .-.-+
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~-t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE-GKTFDRMLDVPDCYHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEECCSEEEEEEEETTEEEEEETTSS
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC-CCeEEEEEEcCCceeeccCCCcEEEEEcCCCC
Confidence 8776321 3456789999999999875 4789999998 6666666543110 00012
Q ss_pred ------------------------------EEcCCCCEEEEEecCCeEEEEEcccce-----------------------
Q psy11036 133 ------------------------------CLASGGKRLISASLDHHAKIYEMTLKT----------------------- 159 (239)
Q Consensus 133 ------------------------------~~~~~~~~l~~~~~d~~i~i~d~~~~~----------------------- 159 (239)
.+.+++..++.....+.+.+.|+....
T Consensus 241 ~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g 320 (426)
T 3c75_H 241 LARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGG 320 (426)
T ss_dssp EEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS
T ss_pred EEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCC
Confidence 234444444444556677777763110
Q ss_pred ------------Eeeee----------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCC-eEEEEc-CCceEEEE
Q psy11036 160 ------------VSSFT----------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK-RLISAS-LDHHAKIY 215 (239)
Q Consensus 160 ------------~~~~~----------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s-~d~~i~iw 215 (239)
+.... +...|.+.|..+ .+.+..+.. ......+.|+|||+ +++++. .++.|.++
T Consensus 321 ~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 321 WQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp SSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred ceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 00000 124588888776 455555543 22477899999999 888777 59999999
Q ss_pred EccCCeeeEEec
Q psy11036 216 EMVNFSPVHTLD 227 (239)
Q Consensus 216 d~~~~~~~~~~~ 227 (239)
|+.+++.++++.
T Consensus 399 D~~t~kvv~tI~ 410 (426)
T 3c75_H 399 DAATGEELRSVD 410 (426)
T ss_dssp ETTTCCEEEEEC
T ss_pred ECCCCCEEEEec
Confidence 999999999973
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=2.6e-13 Score=100.75 Aligned_cols=158 Identities=9% Similarity=0.007 Sum_probs=114.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~ 120 (239)
..+.++++.+ +++++++...++.|.+|+..+....... .....+.+++++++++++++.. ++.|.+||.. ......
T Consensus 108 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~ 185 (270)
T 1rwi_B 108 NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE-SNNQVV 185 (270)
T ss_dssp SSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT-TCCEEE
T ss_pred CCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC-CCceEe
Confidence 5688999999 7788887777889999986655443322 2334678899999998777665 6899999987 443333
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~ 200 (239)
....+...+..++++++|..+++...++.|.+|+..+.. .......+...+.+++++++|
T Consensus 186 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~--------------------~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 186 LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT--------------------STVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC--------------------CEECCCCSCSCEEEEEECTTC
T ss_pred ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc--------------------ceeeccCCCCCceeEEECCCC
Confidence 222333668899999999777777778899999877211 111111223568899999999
Q ss_pred CeEEEEcCCceEEEEEccCCee
Q psy11036 201 KRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 201 ~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
+++++...++.|+++++...+.
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGGGS
T ss_pred CEEEEECCCCEEEEEcCCCccc
Confidence 9889999999999999876544
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=8.9e-13 Score=111.02 Aligned_cols=195 Identities=7% Similarity=-0.007 Sum_probs=133.7
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCe----------------EEEEeC
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKT----------------VNVYDT 72 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~----------------v~vw~~ 72 (239)
.|++||+.+++.......+ ..+..++|+| +++.|+.++.++. |++|++
T Consensus 152 ~i~v~d~~tg~~~~~~~~~---------------~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l 215 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER---------------VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVL 215 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE---------------ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEET
T ss_pred EEEEEECCCCCCCcccccC---------------cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEEC
Confidence 8999999999876543322 2366899999 7888888777765 999999
Q ss_pred CCCCce--eeec---CCCCEEEEEEecCCcEEEEeC------CCcEEEEEccC------CCeEEEEEeccCCceEEEEEc
Q psy11036 73 RSPDPV--MSVN---HGSPVESVLCLPSGGIFVTGG------GLDVCIWDMLG------GGKLLHKFTCHHKTVTSLCLA 135 (239)
Q Consensus 73 ~~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~~------~~~i~~~d~~~------~~~~~~~~~~~~~~i~~i~~~ 135 (239)
.+++.. ..+. +...+..+.|+|+|++++... +..|.+||+.. .......+..+...+.. .|+
T Consensus 216 ~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s 294 (710)
T 2xdw_A 216 GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVT 294 (710)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEE
T ss_pred CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEe
Confidence 887632 2222 345678999999999888764 35799999973 12245556666666654 488
Q ss_pred CCCCEEEEEecC----CeEEEEEcc-cc-----eE---------eee--e------------cceeEEEEEccCCCEEEE
Q psy11036 136 SGGKRLISASLD----HHAKIYEMT-LK-----TV---------SSF--T------------GGLDVCIWDMLGGGKLLH 182 (239)
Q Consensus 136 ~~~~~l~~~~~d----~~i~i~d~~-~~-----~~---------~~~--~------------~~~~i~~~d~~~~~~~~~ 182 (239)
|+|+.|+..+.+ +.|.+||+. .. .+ ..+ . +...+.+||+.+ ++...
T Consensus 295 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~ 373 (710)
T 2xdw_A 295 NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLK 373 (710)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEE
Confidence 899887776653 368889886 21 11 111 1 112366777644 34556
Q ss_pred EEecccCcEEEEEEccCCCeEE-EEc---CCceEEEEEccCCe
Q psy11036 183 KFTCHHKTVTSLCLASGGKRLI-SAS---LDHHAKIYEMVNFS 221 (239)
Q Consensus 183 ~~~~h~~~v~~~~~s~~~~~l~-s~s---~d~~i~iwd~~~~~ 221 (239)
.+..+.+.+..+.++|+++.++ +.+ ..+.|+.||+.+++
T Consensus 374 ~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 374 IFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6666777889999999987665 322 35789999998876
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=3.8e-13 Score=100.46 Aligned_cols=164 Identities=11% Similarity=0.086 Sum_probs=124.1
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeeecCC--CCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccC-CceEE
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHG--SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH-KTVTS 131 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~ 131 (239)
+++|++++.|+.|.+||.++++.+..+... ..+.++.+.|+|++++ +.++.|..||. +++.+.++..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~--~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR--DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT--TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC--CCCEEEEEcCCCCccccc
Confidence 578999999999999999999999888533 4688999999999888 55778999998 477777777653 57889
Q ss_pred EEEcCCCCEEEEEec-CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 132 LCLASGGKRLISASL-DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 132 i~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
+.+.++|+.+++.+. ++.+..+|..++.+..+. +... ...+......+++.++|+++++...++
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~---------~~~~------~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE---------FETG------IERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTTSCEEEEEE---------ECCS------CSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEe---------ccCC------CCcccccccCceECCCCCEEEEecCCC
Confidence 999999999999887 777777776544433331 0000 011222344567889999999999999
Q ss_pred eEEEEEccCCeeeEEecCCCCeeeeEe
Q psy11036 211 HAKIYEMVNFSPVHTLDYPSPVLSIDV 237 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~~~v~~~~~ 237 (239)
.|..||.+ |+.+.++..+..+.++..
T Consensus 147 ~v~~~d~~-G~~~w~~~~~~~~~~~~~ 172 (276)
T 3no2_A 147 EVREIAPN-GQLLNSVKLSGTPFSSAF 172 (276)
T ss_dssp EEEEECTT-SCEEEEEECSSCCCEEEE
T ss_pred EEEEECCC-CCEEEEEECCCCccceeE
Confidence 99999998 999998886555555444
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=1.9e-12 Score=97.51 Aligned_cols=171 Identities=12% Similarity=0.099 Sum_probs=117.9
Q ss_pred CCeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
....+++|+| +++ +++++..++.|..|+..++ ...+ .+...+.+++++|+|+++++.. ++.|.+||.. +++..
T Consensus 28 ~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~-~g~~~ 103 (296)
T 3e5z_A 28 TWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP-GGEWE 103 (296)
T ss_dssp SSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST-TCCEE
T ss_pred ccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC-CCcEE
Confidence 6788999999 666 8888888999999999877 4444 5667799999999999888776 5889999986 44433
Q ss_pred EEEecc----CCceEEEEEcCCCCEEEEEec-----------------CCeEEEEEcccceEeeeecceeEEEEEccCCC
Q psy11036 120 HKFTCH----HKTVTSLCLASGGKRLISASL-----------------DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG 178 (239)
Q Consensus 120 ~~~~~~----~~~i~~i~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~ 178 (239)
...... ...+..++++|+|+++++... .+.|..++.. +
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---------------------g 162 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---------------------G 162 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---------------------S
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---------------------C
Confidence 322211 234567999999998887321 1233333222 2
Q ss_pred EEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc-CCee---eEEec-CCCCeeeeEecC
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFSP---VHTLD-YPSPVLSIDVSM 239 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~~---~~~~~-~~~~v~~~~~sp 239 (239)
+ ...+..+......++|+|+++.|++.+.++.|++|++. +++. ...+. ....+.+++++|
T Consensus 163 ~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 163 T-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp C-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred C-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence 2 22233455667899999999988888889999999996 5554 22222 233455666653
No 197
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=2e-12 Score=100.32 Aligned_cols=174 Identities=13% Similarity=0.050 Sum_probs=120.9
Q ss_pred CCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-----------CCcEEEEEccCCCeEEEEEecc------
Q psy11036 63 YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-----------GLDVCIWDMLGGGKLLHKFTCH------ 125 (239)
Q Consensus 63 ~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------ 125 (239)
.|+.|.+||..+++.+..+...... .++++|++++++++. ++.|.+||+. +.+.+.++...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-KLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-TCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-CCcEEEEEEcCcccccc
Confidence 4789999999999888777433334 899999999999874 3569999998 77777777632
Q ss_pred CCceEEEEEcCCCCEEEEEec--CCeEEEEEcc-cceEee-e---------------------ecceeEEEEEccCCCEE
Q psy11036 126 HKTVTSLCLASGGKRLISASL--DHHAKIYEMT-LKTVSS-F---------------------TGGLDVCIWDMLGGGKL 180 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~-~~~~~~-~---------------------~~~~~i~~~d~~~~~~~ 180 (239)
......++++|+|++|+++.. ++.|.+||+. .+.+.. + ++++.+..++....++.
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~ 186 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKV 186 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcE
Confidence 234677999999999998874 5899999998 544444 2 12233444544332221
Q ss_pred E------------------------------------EEEeccc-----------------------CcEEEEEEccCCC
Q psy11036 181 L------------------------------------HKFTCHH-----------------------KTVTSLCLASGGK 201 (239)
Q Consensus 181 ~------------------------------------~~~~~h~-----------------------~~v~~~~~s~~~~ 201 (239)
. ..+.... .....++|+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~ 266 (361)
T 2oiz_A 187 ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG 266 (361)
T ss_dssp EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred eeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC
Confidence 1 0000000 0001268899988
Q ss_pred eEEEEcC-----------CceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 202 RLISASL-----------DHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 202 ~l~s~s~-----------d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
.++.+.. ++.|.+||+.+++.+.++.... +.+++|+|
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~sp 314 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQ 314 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEET
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECC
Confidence 7766532 3589999999999999999666 99999987
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=5.6e-12 Score=106.67 Aligned_cols=192 Identities=11% Similarity=0.092 Sum_probs=127.0
Q ss_pred CeEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CC------------
Q psy11036 44 YVRAGTVSPVSSDIVISGSYD-----KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GL------------ 105 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~------------ 105 (239)
.+..++|+| ++++|+.++.+ .+|++||+.+++.+........+..++|+|+ +.|+.+. ++
T Consensus 164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 578999999 78887766543 3699999999987553222222357899999 8777766 43
Q ss_pred --cEEEEEccCCCe----EEEEEeccCCceEEEEEcCCCCEEEEEecCC-----eEEEEEcccc--e-Eeeee-------
Q psy11036 106 --DVCIWDMLGGGK----LLHKFTCHHKTVTSLCLASGGKRLISASLDH-----HAKIYEMTLK--T-VSSFT------- 164 (239)
Q Consensus 106 --~i~~~d~~~~~~----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~-~~~~~------- 164 (239)
.|.+|++. +.. .+.....+...+..+.|+|||++|+..+.++ .|++||+... . ...+.
T Consensus 242 ~~~v~~~~lg-t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 242 NQTVWLHRLG-TPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp CCEEEEEETT-SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred CCEEEEEECC-CCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 28888886 332 2222222333588999999999988877554 8999998722 2 22221
Q ss_pred ------------------cceeEEEEEccCC-CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc-CCeeeE
Q psy11036 165 ------------------GGLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFSPVH 224 (239)
Q Consensus 165 ------------------~~~~i~~~d~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~-~~~~~~ 224 (239)
....|.+||+.+. .+....+..+...+..+.++ ++.++++...|+..+||.+. +++...
T Consensus 321 ~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 321 DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 1234778887653 23344444555567777777 66778888889987777654 466666
Q ss_pred EecC--CCCeeeeEecC
Q psy11036 225 TLDY--PSPVLSIDVSM 239 (239)
Q Consensus 225 ~~~~--~~~v~~~~~sp 239 (239)
.+.. .+.+..++++|
T Consensus 400 ~l~~~~~~~v~~~~~s~ 416 (741)
T 1yr2_A 400 AVSLPGIGSASGLSGRP 416 (741)
T ss_dssp ECBCSSSCEEEEEECCB
T ss_pred eccCCCCeEEEEeecCC
Confidence 6663 45677777765
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.50 E-value=6.6e-11 Score=89.58 Aligned_cols=200 Identities=9% Similarity=0.097 Sum_probs=132.6
Q ss_pred CCCCCEEEEeeCCCcceeeeeeC-----CceeeccceeeccCCCCCeEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCc
Q psy11036 4 DLPILIVALWDIPSEAQVSTFTN-----HTTIYKVPLMLYSTPQDYVRAGTVSPVS-SDIVISGSYDKTVNVYDTRSPDP 77 (239)
Q Consensus 4 ~~~dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~v~vw~~~~~~~ 77 (239)
+..++.|.+||..+++... +.. +. ..+.++++++ + ++++++.. ...|.+||.. ++.
T Consensus 42 ~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~--------------~~~~~i~~~~-~~g~l~v~~~-~~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTV-ICKPEVNGYG--------------GIPAGCQCDR-DANQLFVADM-RLGLLVVQTD-GTF 103 (314)
T ss_dssp TEECCEEEEECTTTCCEEE-EECCEETTEE--------------CCEEEEEECS-SSSEEEEEET-TTEEEEEETT-SCE
T ss_pred CCCCCEEEEEeCCCCcEEE-EEecccCCCC--------------CCCceEEEec-CCCcEEEEEC-CCCEEEEeCC-CCE
Confidence 4456889999987776533 222 33 6688999999 5 65555443 4479999988 665
Q ss_pred eee-ec-----CCCCEEEEEEecCCcEEEEeC-C---------------CcEEEEEccCCCeEEEEEeccCCceEEEEEc
Q psy11036 78 VMS-VN-----HGSPVESVLCLPSGGIFVTGG-G---------------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 135 (239)
Q Consensus 78 ~~~-~~-----~~~~v~~~~~~~~~~~l~~~~-~---------------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~ 135 (239)
... .. ....+.+++++++|+++++.. + +.|..++.. ++.. .+..+......++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~-~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMI-QVDTAFQFPNGIAVR 180 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEE-EEEEEESSEEEEEEE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEE-EeccCCCCcceEEEe
Confidence 433 21 123578999999998887765 3 345556543 3333 233334456889999
Q ss_pred ----CCCCEEEEE-ecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEEccCCCeEEEEcC
Q psy11036 136 ----SGGKRLISA-SLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 136 ----~~~~~l~~~-~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~ 208 (239)
|+++.++.+ ..++.|.+||.+ ...+.. .+....+..+. ..+..++++++|+++++...
T Consensus 181 ~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~---------------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 181 HMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN---------------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp ECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE---------------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred cccCCCCCEEEEEECCCCeEEEEECCCCCcccc---------------ceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 999765554 467899999875 111100 01112223333 55788999999998888878
Q ss_pred CceEEEEEccCCeeeEEecCC-CCeeeeEecC
Q psy11036 209 DHHAKIYEMVNFSPVHTLDYP-SPVLSIDVSM 239 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp 239 (239)
++.|.+||..+++.+..+..+ ..+.+++|+|
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~ 277 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP 277 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECT
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECC
Confidence 899999999878877777643 6788888865
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=2e-12 Score=100.36 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=99.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~ 121 (239)
. |+.++| ++..|+++ .++.|++||+.+....... .+..++.++.+.+.. ++++..||.+.+||+. .+....
T Consensus 89 ~-V~~l~f---d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~-~~~~~~- 160 (388)
T 1xip_A 89 D-VIFVCF---HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLR-TKSTKQ- 160 (388)
T ss_dssp T-EEEEEE---ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETT-TCCEEE-
T ss_pred C-eeEEEE---CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEcc-CCcccc-
Confidence 5 999999 46788888 8899999999877655544 567778888777543 4444458999999998 444432
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEE--EEEE------e---cccCc
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKL--LHKF------T---CHHKT 190 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~------~---~h~~~ 190 (239)
+...|++++|+|+| ++.|..||++++|+.++ .+. ...+ . +|...
T Consensus 161 ---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~--------------------~~~~~k~~I~~Pp~~~~~~~~~~~ 215 (388)
T 1xip_A 161 ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRN--------------------GEMEKQFEFSLPSELEELPVEEYS 215 (388)
T ss_dssp ---EEESEEEEEECSSE--EEEEETTSCEEEEEEET--------------------TEEEEEEEECCCHHHHTSCTTTSE
T ss_pred ---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCC--------------------ccccccceecCCcccccccCCCee
Confidence 44689999999999 78899999999998872 221 2233 2 36788
Q ss_pred EEEEEEccCCCeEEEE
Q psy11036 191 VTSLCLASGGKRLISA 206 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~ 206 (239)
|.++.|.++++++++-
T Consensus 216 V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 216 PLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEESSSSEEEEEE
T ss_pred EEEEEEecCCeEEEEE
Confidence 9999999999998863
No 201
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.49 E-value=3.5e-12 Score=98.62 Aligned_cols=207 Identities=10% Similarity=-0.046 Sum_probs=138.7
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee----------CCCeEEEEeCCCCCce
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS----------YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~vw~~~~~~~~ 78 (239)
.|.++|..+++.+.++.... .+ .+.++| +++.++++. .++.|.+||+.+++.+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--------------~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--------------LS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--------------TC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred eEEEEECCCCeEEEEEeCCC--------------CC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 89999999999999998876 66 799999 566665554 4689999999999999
Q ss_pred eeecCC--------CCEEEEEEecCCcEEEEeC---CCcEEE--EEccCCCeEEEEEec---------c---------CC
Q psy11036 79 MSVNHG--------SPVESVLCLPSGGIFVTGG---GLDVCI--WDMLGGGKLLHKFTC---------H---------HK 127 (239)
Q Consensus 79 ~~~~~~--------~~v~~~~~~~~~~~l~~~~---~~~i~~--~d~~~~~~~~~~~~~---------~---------~~ 127 (239)
.++... .....++++|+|++++++. +..+.+ +|+.. +.++.. + .+
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCCTT
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcCCC
Confidence 887422 3456899999999998875 356888 88752 222210 0 00
Q ss_pred ceEEEEE--------------------------cCCCCEEEEEecCCeEEEEEccc------------------------
Q psy11036 128 TVTSLCL--------------------------ASGGKRLISASLDHHAKIYEMTL------------------------ 157 (239)
Q Consensus 128 ~i~~i~~--------------------------~~~~~~l~~~~~d~~i~i~d~~~------------------------ 157 (239)
.+..+.. .+++..++..+. +.+.+.|+..
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~ 264 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSA 264 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccC
Confidence 0101110 233333344444 6676666631
Q ss_pred -----------ceEee-ee---c-----ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe-EEEEc-CCceEEEE
Q psy11036 158 -----------KTVSS-FT---G-----GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISAS-LDHHAKIY 215 (239)
Q Consensus 158 -----------~~~~~-~~---~-----~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s-~d~~i~iw 215 (239)
+.+.. .. + ...+.++|..+ .+.+..+.... ....++|+|||+. +++.. .++.|.++
T Consensus 265 g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 265 GFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp SSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred cceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEE
Confidence 01111 11 2 23456888876 44444444322 5788999999984 56666 59999999
Q ss_pred EccCCeeeEEecCCCCeeeeEecC
Q psy11036 216 EMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 216 d~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
|+.+++.+.++........+++.+
T Consensus 343 D~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 343 DAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp ESSSCEEEEECCCCSCCCEEECCC
T ss_pred ECCCCcEEEEEECCCCCCEEEeec
Confidence 999999999999777777877753
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=1.8e-10 Score=94.18 Aligned_cols=186 Identities=12% Similarity=0.073 Sum_probs=128.1
Q ss_pred CCCEEEEeeCC--CcceeeeeeCCceeeccceeeccCCCCCeEEEEEe----cCCCCEEEEee-CCCeEEEEeCCCCCce
Q psy11036 6 PILIVALWDIP--SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS----PVSSDIVISGS-YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~s~~-~dg~v~vw~~~~~~~~ 78 (239)
.++.|.+||+. +++.+.++... .....++|+ | ++++++++. .++++.++|..+.+.+
T Consensus 216 ~dg~V~viD~~~~t~~~v~~i~~G---------------~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAEIKIG---------------SEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEEEECC---------------SEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCCCcEeEEEecC---------------CCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEE
Confidence 36899999996 88888888775 346799999 6 566665554 5699999999999888
Q ss_pred eeecC------------CCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE-EEEEeccCCceEEEEEcCCCCEEEE
Q psy11036 79 MSVNH------------GSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLIS 143 (239)
Q Consensus 79 ~~~~~------------~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~l~~ 143 (239)
..+.. ...+..+..++++..+++.. .|.|.++|....... +..+ ........+.|+|+|+++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~v 358 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFIT 358 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEE
Confidence 76631 12678888898877665554 599999998733222 2223 23456778999999998876
Q ss_pred Ee-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-----cccCcEEEEEEccCC-CeEEEEc-CCceEEEE
Q psy11036 144 AS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-----CHHKTVTSLCLASGG-KRLISAS-LDHHAKIY 215 (239)
Q Consensus 144 ~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----~h~~~v~~~~~s~~~-~~l~s~s-~d~~i~iw 215 (239)
+. .++.|.++|+. +++.+..+. .|.+.-..+ ++|++ ..++++. .++.|.++
T Consensus 359 a~~~sn~V~ViD~~--------------------t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 359 AANARNKLVVIDTK--------------------EGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp EEGGGTEEEEEETT--------------------TTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEE
T ss_pred EeCCCCeEEEEECC--------------------CCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEe
Confidence 65 57889999988 223322222 243222222 67874 4445554 57899999
Q ss_pred EccC-------CeeeEEecCC
Q psy11036 216 EMVN-------FSPVHTLDYP 229 (239)
Q Consensus 216 d~~~-------~~~~~~~~~~ 229 (239)
|..+ ++.++++...
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECS
T ss_pred cCCCCCCccccCEEEEEEecC
Confidence 9987 7788888743
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=4.2e-11 Score=94.39 Aligned_cols=193 Identities=9% Similarity=-0.048 Sum_probs=119.7
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeee-
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK--TVNVYDTRSPDPVMSV- 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~- 81 (239)
..++.|++||.++++........ .... ++|++ +++.|+++..++ .|.+++...+.....+
T Consensus 149 ~~~~~I~~id~~~g~~~~~~~~~---------------~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 149 RDDPRVRLISVDDNKVTTVHPGF---------------KGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp TTTTEEEEEETTTTEEEEEEETC---------------CBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred cCCCcEEEEECCCCEEEEeeccC---------------CCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 34577888888766655444433 2333 99999 777777777655 7999998766554444
Q ss_pred ---c-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEE-----eccCCc--eEEEEEcCC-CCEEEEEecCC
Q psy11036 82 ---N-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKF-----TCHHKT--VTSLCLASG-GKRLISASLDH 148 (239)
Q Consensus 82 ---~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~-----~~~~~~--i~~i~~~~~-~~~l~~~~~d~ 148 (239)
. ....+.+++++|++..|+++. ++.|..||.. .+. ...+ .++... ...++|+|+ +.++++-..++
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~-~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVK-TQE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETT-TCC-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECC-CCC-EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 2 446678899999444444454 6889999987 333 2222 112222 238999995 55666666778
Q ss_pred eEEEEEcccceEeeeecceeEEEEEccCCCEEEEE-EecccCcEEEEEEccCCCeEEEEc-CCceEEEEEccCCeeeE
Q psy11036 149 HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMVNFSPVH 224 (239)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~ 224 (239)
.|+.|+..+. +..+.|.. ...+..-.. ....-.....++++|+|+++++-+ .++.|+.|++.+++...
T Consensus 290 ~I~~~~~~g~-~~~~~g~~-------~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 290 SVYKITPDGE-CEWFCGSA-------TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EEEEECTTCC-EEEEEECT-------TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EEEEEecCCC-EEEEEeCC-------CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 8999887733 11111100 000000000 000123478999999999888888 89999999987887543
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=1.7e-10 Score=86.48 Aligned_cols=171 Identities=8% Similarity=-0.028 Sum_probs=119.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--c-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--N-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~ 118 (239)
..+.++++.+ ++.++++...++.|..|+.. ++. ..+ . ....+..+++.+++.++++.. ++.|..||.. ....
T Consensus 57 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~ 132 (299)
T 2z2n_A 57 AKVMCLTISS-DGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIR 132 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE
T ss_pred CceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEE
Confidence 6789999999 78888877778899999976 332 222 2 455789999999998888776 6889999883 3322
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
..........+..+++.++|+.+++...++.|..||..++. .......+...+..+++++
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------------------~~~~~~~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDI--------------------TEFKIPTPASGPVGITKGN 192 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE--------------------EEEECSSTTCCEEEEEECT
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcE--------------------EEeeCCCCCCcceeEEECC
Confidence 22223345578999999999877777667888888764111 1111122345678999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec---CCCCeeeeEecC
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD---YPSPVLSIDVSM 239 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~sp 239 (239)
+|+++++...++.|.+||. +++... +. ....+.+++++|
T Consensus 193 ~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 193 DDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGA 234 (299)
T ss_dssp TSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECS
T ss_pred CCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECC
Confidence 9998888777899999999 666433 32 235677777654
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=5.2e-10 Score=87.05 Aligned_cols=206 Identities=11% Similarity=0.073 Sum_probs=128.9
Q ss_pred CCEEEEeeCCCcceeeeeeCC-ceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceee-ec
Q psy11036 7 ILIVALWDIPSEAQVSTFTNH-TTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY--DKTVNVYDTRSPDPVMS-VN 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--dg~v~vw~~~~~~~~~~-~~ 82 (239)
++.|.+||..+.+.+.++... ... . ........++|+| ++++|+++.. +..|.++| .+++.+.. +.
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~-------~-~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPR-------F-DVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccc-------c-ccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 578999999998888777543 100 0 0002345899999 7888877664 57899999 99998888 65
Q ss_pred CCCCEEEEEEecCCc-EEEEe-CCCcEEEEEccCCCeEEEEEe-----ccCCce-EEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 83 HGSPVESVLCLPSGG-IFVTG-GGLDVCIWDMLGGGKLLHKFT-----CHHKTV-TSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~-~l~~~-~~~~i~~~d~~~~~~~~~~~~-----~~~~~i-~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
.... +.+.|.+. .+++. .||.+.++|. .++...... ....++ ....+.+++..++..+.++.+.+.|
T Consensus 166 ~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~--~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid 240 (373)
T 2mad_H 166 SPTC---YHIHPGAPSTFYLLCAQGGLAKTDH--AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred CCce---EEEEeCCCceEEEEcCCCCEEEEEC--CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEe
Confidence 4443 44556553 33333 3899999998 333332211 111221 2234555554444444566777777
Q ss_pred cccc---eEe----------------------ee----------e----------cceeEEEEEccCCCEEEEEEecccC
Q psy11036 155 MTLK---TVS----------------------SF----------T----------GGLDVCIWDMLGGGKLLHKFTCHHK 189 (239)
Q Consensus 155 ~~~~---~~~----------------------~~----------~----------~~~~i~~~d~~~~~~~~~~~~~h~~ 189 (239)
+... .+. .+ . +...|.++|..+ .+.+..+.. ..
T Consensus 241 ~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~ 318 (373)
T 2mad_H 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GH 318 (373)
T ss_pred ccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CC
Confidence 6411 000 00 0 123577788765 566666643 33
Q ss_pred cEEEEEEccCCC-eEEEEc-CCceEEEEEccCCeeeEE-ecCC
Q psy11036 190 TVTSLCLASGGK-RLISAS-LDHHAKIYEMVNFSPVHT-LDYP 229 (239)
Q Consensus 190 ~v~~~~~s~~~~-~l~s~s-~d~~i~iwd~~~~~~~~~-~~~~ 229 (239)
....+.|+|||+ +++++. .++.|.++|+.+++.+.+ ....
T Consensus 319 ~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG 361 (373)
T 2mad_H 319 DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG 361 (373)
T ss_pred CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCC
Confidence 578999999999 777777 589999999999999998 4433
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.45 E-value=5.1e-10 Score=83.93 Aligned_cols=169 Identities=8% Similarity=-0.041 Sum_probs=118.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..+.++++.+ ++.++++...++.|.+||. +++..... .....+..+++.+++..+++.. ++.|..||. .++..
T Consensus 99 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~~ 174 (299)
T 2z2n_A 99 SAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE--SGDIT 174 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT--TCCEE
T ss_pred CCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC--CCcEE
Confidence 5788999999 7888887777889999998 55543322 2446789999999998888776 588999998 33333
Q ss_pred EE-EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 HK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~~-~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
.. .......+..++++++|+.+++...++.|.+||..++ ........+...+.++++++
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--------------------~~~~~~~~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGE--------------------ITEFKIPTPNARPHAITAGA 234 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC--------------------EEEEECSSTTCCEEEEEECS
T ss_pred EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCc--------------------EEEEECCCCCCCceeEEECC
Confidence 22 2334456889999999987777666788888876411 11111123446788999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec---CCCCeeeeEe
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD---YPSPVLSIDV 237 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~ 237 (239)
+|+++++...++.|..||. +++. ..+. ....+.++++
T Consensus 235 ~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF 274 (299)
T ss_dssp TTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE
T ss_pred CCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe
Confidence 9998777777899999998 4543 3332 2345666665
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=5.4e-10 Score=85.41 Aligned_cols=195 Identities=12% Similarity=0.069 Sum_probs=125.6
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC---
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH--- 83 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~--- 83 (239)
++.|..||.++++.. .+.. . ..+.++++++ +++++++. .+ .|.+||..+++.......
T Consensus 70 ~~~i~~~d~~~~~~~-~~~~-~--------------~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 70 ERELHELHLASGRKT-VHAL-P--------------FMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp GTEEEEEETTTTEEE-EEEC-S--------------SCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEEEEECSSTT
T ss_pred CCEEEEEECCCCcEE-EEEC-C--------------CcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCC
Confidence 467777777665432 2322 2 5789999999 67766654 44 499999988775433221
Q ss_pred --CCCEEEEEEecCCcEEEEeCC-----CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEc
Q psy11036 84 --GSPVESVLCLPSGGIFVTGGG-----LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEM 155 (239)
Q Consensus 84 --~~~v~~~~~~~~~~~l~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~ 155 (239)
...+..++++|+|+++++..+ ....+|.+. .++.. .+..+......++|+|+++.++.+ +.++.|.+|++
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL 208 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEc
Confidence 235889999999997775532 234455544 44433 233333456789999999876555 45688888887
Q ss_pred c--cc-eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC-CC
Q psy11036 156 T--LK-TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP-SP 231 (239)
Q Consensus 156 ~--~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~~ 231 (239)
+ .. .+. ..+....+.........+++.++|.+.++...++.|..||. +++.+..+..+ ..
T Consensus 209 ~~~~Gl~~~---------------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~ 272 (326)
T 2ghs_A 209 DARTGLPTG---------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ 272 (326)
T ss_dssp CTTTCCBSS---------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB
T ss_pred ccccCCccc---------------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC
Confidence 4 11 000 01112222223345678999999998887767789999998 67777777744 46
Q ss_pred eeeeEec
Q psy11036 232 VLSIDVS 238 (239)
Q Consensus 232 v~~~~~s 238 (239)
+.+++|+
T Consensus 273 ~~~~af~ 279 (326)
T 2ghs_A 273 TTCPAFI 279 (326)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 8899886
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=7.1e-11 Score=89.43 Aligned_cols=155 Identities=9% Similarity=0.122 Sum_probs=108.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCC---------------CeEEEEeCCCCCceeeecCCCCEEEEEEe----cCCcEEEEeC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYD---------------KTVNVYDTRSPDPVMSVNHGSPVESVLCL----PSGGIFVTGG 103 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~d---------------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~ 103 (239)
..+.++++++ +++++++...+ +.|..++.. ++.............++++ |+++.++++.
T Consensus 117 ~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEE
Confidence 3578999999 77877776654 567777765 5543333444556889999 9997665553
Q ss_pred --CCcEEEEEccCCCe-----EEEEEeccC-CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEcc
Q psy11036 104 --GLDVCIWDMLGGGK-----LLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175 (239)
Q Consensus 104 --~~~i~~~d~~~~~~-----~~~~~~~~~-~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~ 175 (239)
++.|.+|++...++ ....+..+. ..+..++++++|+.+++...++.|.+||.+
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~------------------- 255 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD------------------- 255 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT-------------------
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC-------------------
Confidence 68899999762233 222233333 567889999999988888788899998876
Q ss_pred CCCEEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEccC
Q psy11036 176 GGGKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMVN 219 (239)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~ 219 (239)
+++....+..+...+.+++|+|+++ ++++...++.|..|++..
T Consensus 256 -~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 256 -GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp -CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred -CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 1222333344557789999999999 445566678999999864
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=3.3e-10 Score=85.70 Aligned_cols=193 Identities=11% Similarity=0.119 Sum_probs=120.7
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--- 82 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--- 82 (239)
.++.|..|+. +++ ...+..+. ..+..+++++ +++++++...++.|.+|+.. ++......
T Consensus 65 ~~~~i~~~~~-~g~-~~~~~~~~--------------~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~ 126 (305)
T 3dr2_A 65 VGRRVLGWRE-DGT-VDVLLDAT--------------AFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA 126 (305)
T ss_dssp TTTEEEEEET-TSC-EEEEEESC--------------SCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred CCCEEEEEeC-CCC-EEEEeCCC--------------CccceeeECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence 3567777876 444 34444444 6789999999 78877665566889999986 55332221
Q ss_pred --CCCCEEEEEEecCCcEEEE----eC--------------CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEE
Q psy11036 83 --HGSPVESVLCLPSGGIFVT----GG--------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI 142 (239)
Q Consensus 83 --~~~~v~~~~~~~~~~~l~~----~~--------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~ 142 (239)
....+..++++|+|.++++ +. .+.|..+|.. .++..... .......++|+|+++.|+
T Consensus 127 ~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~~~~--~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 127 GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQRMA--DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCEEEE--EESSEEEEEECTTSSEEE
T ss_pred CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEEEEe--cCCCCcceEEcCCCCEEE
Confidence 1234678999999998886 22 1346666654 33333222 344568899999999887
Q ss_pred EEecC------CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEE
Q psy11036 143 SASLD------HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 143 ~~~~d------~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.+... +.|.+|++....+... +.. ..........+++.++|++.++. .+ .|.+|+
T Consensus 204 v~~~~~~~~~~~~i~~~~~~~~~l~~~---------------~~~--~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~ 264 (305)
T 3dr2_A 204 VSQTPEQGHGSVEITAFAWRDGALHDR---------------RHF--ASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFD 264 (305)
T ss_dssp EEECCC---CCCEEEEEEEETTEEEEE---------------EEE--ECCSSSCCCSEEECTTSCEEECC-SS-EEEEEC
T ss_pred EEecCCcCCCCCEEEEEEecCCCccCC---------------eEE--EECCCCCCCeEEECCCCCEEEec-CC-cEEEEC
Confidence 77665 6888888762111100 000 01112334567888888854443 44 488888
Q ss_pred ccCCeeeEEecCCCCeeeeEecC
Q psy11036 217 MVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
. .++.+..+..+..+.+++|+|
T Consensus 265 ~-~g~~~~~~~~~~~~~~~~f~~ 286 (305)
T 3dr2_A 265 S-DGQLLGHIPTPGTASNCTFDQ 286 (305)
T ss_dssp T-TSCEEEEEECSSCCCEEEECT
T ss_pred C-CCCEEEEEECCCceeEEEEeC
Confidence 7 577777777655677887753
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=2.2e-09 Score=80.44 Aligned_cols=172 Identities=10% Similarity=-0.025 Sum_probs=118.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-ec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..+.++++.+ +++++++...++.|..+|.. ++.... +. ....+..+++.+++.++++.. ++.|..+|.. ++..
T Consensus 62 ~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~ 137 (300)
T 2qc5_A 62 AKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIY 137 (300)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEE
T ss_pred CcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEE
Confidence 5788999998 77887777667899999987 554322 12 346789999999999888776 6889999885 3332
Q ss_pred -EEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 -HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 -~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
..+......+..+++.++++.+++...++.|..+|..++ ........+...+..+++.+
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~--------------------~~~~~~~~~~~~~~~i~~d~ 197 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGK--------------------LEEYPLPTNAAAPVGITSGN 197 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC--------------------EEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCc--------------------EEEeeCCCCCCCcceEEECC
Confidence 222334457899999999996666666778888876511 11111122345688999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEE-ec-CCCCeeeeEecC
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHT-LD-YPSPVLSIDVSM 239 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp 239 (239)
+|++.++....+.|.+|+. +++.... +. ....+.++++.|
T Consensus 198 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 198 DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK 239 (300)
T ss_dssp TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS
T ss_pred CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC
Confidence 9988887777888999998 5554332 22 234566776653
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=1.8e-09 Score=80.89 Aligned_cols=171 Identities=8% Similarity=-0.036 Sum_probs=116.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-ec-CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
..+.++++.+ +++++++...++.|..++.. ++.... +. ....+..+++.++++++++.. ++.|..++.. ++..
T Consensus 104 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~~~ 179 (300)
T 2qc5_A 104 SGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT--GKLE 179 (300)
T ss_dssp CCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEE
T ss_pred CCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC--CcEE
Confidence 5688999998 78888877768899999987 554422 22 346789999999999777666 5789999883 3333
Q ss_pred E-EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 H-KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~-~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
. ....+...+..+++.++|+.+++....+.|.+|+..++ ........+...+.++++.+
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~--------------------~~~~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGE--------------------ISEYDIPTPNARPHAITAGK 239 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC--------------------EEEEECSSTTCCEEEEEECS
T ss_pred EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCc--------------------EEEEECCCCCCCceEEEECC
Confidence 2 22234456889999999987776666778888876511 11111123345688999999
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeE-Eec-CCCCeeeeEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVH-TLD-YPSPVLSIDVS 238 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~-~~~-~~~~v~~~~~s 238 (239)
+|++.++...++.|..|+. +++... .+. ....+.++++.
T Consensus 240 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 240 NSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFG 280 (300)
T ss_dssp TTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEEC
T ss_pred CCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeC
Confidence 9998887777899999998 444332 122 23456666654
No 212
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.37 E-value=7.1e-10 Score=81.55 Aligned_cols=169 Identities=12% Similarity=-0.005 Sum_probs=117.3
Q ss_pred CeEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceeeecCCC--CEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe
Q psy11036 44 YVRAGTVSPVSSDIVISGSY--DKTVNVYDTRSPDPVMSVNHGS--PVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK 117 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~--dg~v~vw~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~ 117 (239)
....++|++ ++.++++.+. ++.|++.|+.+++.+..+.... ....+++. +..++.+. ++.+.++|.. +.+
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~-t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR-TLS 97 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT-TTE
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECC-CCc
Confidence 368999998 5655555543 5799999999999888874322 33345554 55565555 7999999998 788
Q ss_pred EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecc-----cCcEE
Q psy11036 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH-----HKTVT 192 (239)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h-----~~~v~ 192 (239)
.+.++..... ....+++||+.++++..++.|.++|.. +.+....+.-- -..+.
T Consensus 98 v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~--------------------t~~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 98 NIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPH--------------------TFKLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp EEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTT--------------------TCCEEEEEECEETTEECCCEE
T ss_pred EEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECC--------------------CCcEEEEEEECCCCcccccce
Confidence 8888864311 124456688777777678889988887 22222222211 12356
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC--------------CCeeeeEecC
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP--------------SPVLSIDVSM 239 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp 239 (239)
.+.|. +|+..+....++.|.+.|..+++.+..+... ...+.++|+|
T Consensus 156 ele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 156 ELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp EEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET
T ss_pred eEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC
Confidence 77887 7776666667899999999999999998743 3568888876
No 213
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=6.4e-10 Score=87.01 Aligned_cols=210 Identities=11% Similarity=0.047 Sum_probs=132.3
Q ss_pred CCCCCCEEEEeeCCCc----ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC------CeEEEEeC
Q psy11036 3 HDLPILIVALWDIPSE----AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD------KTVNVYDT 72 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------g~v~vw~~ 72 (239)
+...++.|+++|+.+. +..++++..+...+ .....-..+...| ++ +++++..+ +.+.++|.
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~-------~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKV-------SGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHH-------HCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCCCeEEEEECCCCCCCceeeeeechhhcccc-------cCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEEC
Confidence 3456689999998754 55555531000000 0002455677888 66 77776655 78999999
Q ss_pred CCCCceeeecCC----CCEEEEEEecCCcEEEEeC--------------------CCcEEEEEccCCCeEEEEEeccC--
Q psy11036 73 RSPDPVMSVNHG----SPVESVLCLPSGGIFVTGG--------------------GLDVCIWDMLGGGKLLHKFTCHH-- 126 (239)
Q Consensus 73 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~-- 126 (239)
++.+.+.++... .--..+.|+|+++.++++. +.+|.+||+. .++.+.++....
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~-~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR-KRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT-TTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC-CCcEeeEEecCCCC
Confidence 999998888422 2234588899999998884 5889999998 677777776431
Q ss_pred CceEEEEE--cCCCCEEEEEe------cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-------cccCcE
Q psy11036 127 KTVTSLCL--ASGGKRLISAS------LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-------CHHKTV 191 (239)
Q Consensus 127 ~~i~~i~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------~h~~~v 191 (239)
.....+.| +|+++++.+++ .+++|.+|..+.... ..+.+.|+.. .+....+. +-....
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~------~~~~vIdi~~-~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW------NAEKVIEIPA-EPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE------EEEEEEEECC-EECCSSCCGGGGGGTEECCCC
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce------eEEEEEeCCC-ccccccccccccccccCCCce
Confidence 23445656 99999877776 466888777652110 0122233221 00000000 002346
Q ss_pred EEEEEccCCCeEEEEc-CCceEEEEEcc---CCeeeEEecCC
Q psy11036 192 TSLCLASGGKRLISAS-LDHHAKIYEMV---NFSPVHTLDYP 229 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s-~d~~i~iwd~~---~~~~~~~~~~~ 229 (239)
..+.+||||++|.++. ..+.|.+||+. +.+.+..+...
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECB
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC
Confidence 7889999999987665 47899999985 34666666643
No 214
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.34 E-value=1.7e-08 Score=74.80 Aligned_cols=173 Identities=8% Similarity=-0.011 Sum_probs=109.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC-C---CcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-G---LDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~---~~i~~~d~~~~~~ 117 (239)
.....+++++.++.++++-...+.|.++++.......... .......++++|++..++.+. . +.|..+++. . .
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g-~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-G-T 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-S-C
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-C-C
Confidence 4678999998445566666667899999987543322222 225678999999655555444 2 578888876 2 2
Q ss_pred EEEEE-eccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEE
Q psy11036 118 LLHKF-TCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 195 (239)
Q Consensus 118 ~~~~~-~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~ 195 (239)
....+ .........+++++++..|..+ ...+.|..+|..+... ...... ......++
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--------------------~~~~~~-~~~P~gi~ 215 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR--------------------RKVLEG-LQYPFAVT 215 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE--------------------EEEEEC-CCSEEEEE
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce--------------------EEEecC-CCCceEEE
Confidence 22222 2233457899999987665544 4567888888872111 111111 12234566
Q ss_pred EccCCCeEEEEcCCceEEEEEccCCeeeEEecCCC--CeeeeEecC
Q psy11036 196 LASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS--PVLSIDVSM 239 (239)
Q Consensus 196 ~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp 239 (239)
.. ++.++++....+.|..+|..+++.+..+.... ....+++.|
T Consensus 216 ~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~ 260 (267)
T 1npe_A 216 SY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (267)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecC
Confidence 54 44455555567899999999999999987432 467777765
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=4.5e-09 Score=79.15 Aligned_cols=157 Identities=15% Similarity=0.152 Sum_probs=104.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~ 122 (239)
.-..+..|+|+++.++++...++.|..||..+++. ..+.....+.+++++|+++++++. ++.|.+||.. +++.....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~-~g~~~~~~ 89 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWK-EQSAVVLA 89 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETT-TTEEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECC-CCcEEEEE
Confidence 45678999996667778888889999999987764 445566789999999999965554 6789999987 45433222
Q ss_pred ec----cCCceEEEEEcCCCCEEEEEecC---------CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccC
Q psy11036 123 TC----HHKTVTSLCLASGGKRLISASLD---------HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189 (239)
Q Consensus 123 ~~----~~~~i~~i~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~ 189 (239)
.. ....+..++++|+|+++++...+ ..-.+|.+. . .++... +..+..
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d-----------------~--~g~~~~-~~~~~~ 149 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF-----------------P--DHHVKK-YFDQVD 149 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC-----------------T--TSCEEE-EEEEES
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE-----------------C--CCCEEE-Eeeccc
Confidence 21 12357889999999966654322 222333332 1 122111 122234
Q ss_pred cEEEEEEccCCCeE-EEEcCCceEEEEEc--cCCee
Q psy11036 190 TVTSLCLASGGKRL-ISASLDHHAKIYEM--VNFSP 222 (239)
Q Consensus 190 ~v~~~~~s~~~~~l-~s~s~d~~i~iwd~--~~~~~ 222 (239)
....++|+|+++.| ++.+.++.|.+|++ .+++.
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 46789999999866 55667889999997 45543
No 216
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.31 E-value=1.9e-10 Score=96.73 Aligned_cols=178 Identities=11% Similarity=-0.004 Sum_probs=115.2
Q ss_pred CEEEEeeCCCcce----eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC----eEEEEeCCCCCcee
Q psy11036 8 LIVALWDIPSEAQ----VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK----TVNVYDTRSPDPVM 79 (239)
Q Consensus 8 g~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg----~v~vw~~~~~~~~~ 79 (239)
..|++|++.+++. +.....+. ..+..+.|+| ++++|+.++.++ .|.+++..+++...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~--------------~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP--------------TTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRL 266 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT--------------TCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEE
T ss_pred CEEEEEECCCCchhceEEEecCCCC--------------EEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEE
Confidence 3499999987762 22223343 5788999999 677777666555 67777766555444
Q ss_pred eecCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCCCeE---EEEEecc-CCceEEEEEcCCCCEEEEEecCCeEE
Q psy11036 80 SVNHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGGGKL---LHKFTCH-HKTVTSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~~~~---~~~~~~~-~~~i~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
...+...+....+ +++.+++.+. ++.|.+||+. .+.. ...+..+ ...+..++++ ++..+++...|+..+
T Consensus 267 l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 267 LVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA-KPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSE 343 (695)
T ss_dssp EEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT-BCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred eecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC-CCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 4445555566666 5666444443 3679999986 3332 3333333 4567888888 677888888999888
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEecc-cCcEEEEEEccCCCeEE----EEcCCceEEEEEccCCee
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGKRLI----SASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~----s~s~d~~i~iwd~~~~~~ 222 (239)
||.++ . .+.....+..+ ...+..++++|+++.++ +....++|++||+.+++.
T Consensus 344 l~~~~-----------------~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 344 VRVAT-----------------L--KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEE-----------------T--TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEe-----------------C--CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 88655 1 12222333333 56677888999987776 333468899999988764
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=8.4e-13 Score=102.71 Aligned_cols=184 Identities=11% Similarity=0.043 Sum_probs=99.0
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
+.||.|+.||..+|+.+..+.. . . +.+..+.. ++..+++++.|+.|+.||..+++.+..+...
T Consensus 16 s~dg~v~a~d~~tG~~~W~~~~-~--------------~-~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 16 TLDGSLHAVSKRTGSIKWTLKE-D--------------P-VLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-C--------------C-SCCCC------CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred cCCCEEEEEECCCCCEEEEecC-C--------------C-ceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 3578999999999999888776 3 2 22333344 5667888889999999999988876555321
Q ss_pred --CCEE-EEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cce
Q psy11036 85 --SPVE-SVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKT 159 (239)
Q Consensus 85 --~~v~-~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~ 159 (239)
..+. ..... .+..+++++ ++.+..||.+ +++.+..+..+. ...++|++..+++++.|+.|+.||.+ ++.
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~-tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLL-TGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECC-CCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 0010 00111 234455555 7899999998 777776665443 23456788889999999999999987 332
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCC---CeEEEEcCCceEEEEEccCCeeeEEecCCCCeee
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG---KRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLS 234 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~v~~ 234 (239)
+..+ ..+. .....+.++. ..++.++.||.|+.||..+|+.+.+....+++..
T Consensus 153 ~W~~---------------------~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~ 207 (369)
T 2hz6_A 153 RWNA---------------------TYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA 207 (369)
T ss_dssp CCEE---------------------EEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred EEeE---------------------eccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence 2222 1100 1122233322 4577788999999999999999988876666543
No 218
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.28 E-value=3.7e-09 Score=76.99 Aligned_cols=173 Identities=10% Similarity=0.031 Sum_probs=118.3
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK--TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~ 118 (239)
.-...+.|+ ++.++.+.+.+| .|+++|+++++....+............+.+..+.... ++.+.+||.. +.+.
T Consensus 43 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-t~~~ 119 (262)
T 3nol_A 43 AFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-NLRQ 119 (262)
T ss_dssp CEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TCCE
T ss_pred cccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-cCcE
Confidence 335788988 457777887776 89999999999988885555554433334455555555 7999999998 8888
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc-CcEEEEEE
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH-KTVTSLCL 196 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~-~~v~~~~~ 196 (239)
+.++..... ...++++++.|+.+..++.|.++|.. .+.+.++. + ...+.. ..+..+.+
T Consensus 120 ~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~---------V--------~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 120 VRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT---------V--------TAHGEELPELNELEW 179 (262)
T ss_dssp EEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE---------C--------EETTEECCCEEEEEE
T ss_pred EEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE---------e--------ccCCccccccceeEE
Confidence 888875332 23344577777777667888888887 33333220 0 000111 23445677
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeEEecCC-------------CCeeeeEecC
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP-------------SPVLSIDVSM 239 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-------------~~v~~~~~sp 239 (239)
. +|+..+..-.+..|.+.|.++++.+..+... ...+.+||+|
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 5 7777776667889999999999999988743 3568899876
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=6.8e-10 Score=85.46 Aligned_cols=183 Identities=8% Similarity=-0.046 Sum_probs=114.6
Q ss_pred CCeEEEEEecCCCCEEEEeeC-----CCeEEEEeCCCCCceeeecC-------CCCEEEEEEecCCcEE-EEe----CCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSY-----DKTVNVYDTRSPDPVMSVNH-------GSPVESVLCLPSGGIF-VTG----GGL 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~-----dg~v~vw~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l-~~~----~~~ 105 (239)
..+.++++++ +++++++-.. ++.|.+||+.+++.+..+.. ...+..+++++++..+ ++. .++
T Consensus 67 ~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 67 DTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 5789999999 6766665433 57899999998886665532 2346899999865444 443 247
Q ss_pred cEEEEEccCCCeEEEEEeccC-----------------------------CceEEEEEcCCCCEEEEEecCC-eEEEEEc
Q psy11036 106 DVCIWDMLGGGKLLHKFTCHH-----------------------------KTVTSLCLASGGKRLISASLDH-HAKIYEM 155 (239)
Q Consensus 106 ~i~~~d~~~~~~~~~~~~~~~-----------------------------~~i~~i~~~~~~~~l~~~~~d~-~i~i~d~ 155 (239)
.|.+||+. .++....+..|. ..+..|+|+|+++.|+.+..++ .+..++.
T Consensus 146 ~i~v~d~~-~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 146 ALIRVDLQ-TGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp EEEEEETT-TCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred eEEEEECC-CCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 89999987 555544443221 2357899999998888877665 4443333
Q ss_pred ccceEeeeecceeEEEEEccCCCEEE--EEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC--CCC
Q psy11036 156 TLKTVSSFTGGLDVCIWDMLGGGKLL--HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY--PSP 231 (239)
Q Consensus 156 ~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--~~~ 231 (239)
.......+ ...+.. ....++......++++++|.++++...++.|.+||.++++....... ...
T Consensus 225 ~~~~~~~~------------~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~ 292 (343)
T 2qe8_A 225 ADLSNLQL------------TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSW 292 (343)
T ss_dssp HHHTCTTC------------CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSC
T ss_pred HHhcCCCC------------ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceec
Confidence 20000000 000000 01112333456789999999999999999999999866764333332 345
Q ss_pred eeeeEecC
Q psy11036 232 VLSIDVSM 239 (239)
Q Consensus 232 v~~~~~sp 239 (239)
+.+++|.|
T Consensus 293 p~~va~~~ 300 (343)
T 2qe8_A 293 TDSFNFGS 300 (343)
T ss_dssp EEEEEECT
T ss_pred CCeeEECC
Confidence 77777754
No 220
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.25 E-value=3.5e-09 Score=89.69 Aligned_cols=182 Identities=13% Similarity=0.068 Sum_probs=116.2
Q ss_pred CCEEEEeeCCCcce--eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC-----eEEEEeCCCC--C-
Q psy11036 7 ILIVALWDIPSEAQ--VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK-----TVNVYDTRSP--D- 76 (239)
Q Consensus 7 dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----~v~vw~~~~~--~- 76 (239)
...|++|++.+++. ...+.... +...+..+.|+| ++++|+..+.++ .|.+||+.++ +
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~------------~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPE------------LPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTT------------CTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred CCEEEEEECCCCchhCEEEeccCC------------CCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 34688899877652 22222221 003588999999 788777666543 8999999877 4
Q ss_pred ceeeecCCCCEEEEEEecCCcEEEEeC-----CCcEEEEEccCC-CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy11036 77 PVMSVNHGSPVESVLCLPSGGIFVTGG-----GLDVCIWDMLGG-GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150 (239)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~~~d~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i 150 (239)
......+........ +|++..|+..+ .+.|.+||+... ......+..+...+..+++. ++..+++...|+..
T Consensus 309 ~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 309 VTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKS 386 (741)
T ss_dssp CEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEE
T ss_pred cEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 333334444444443 48888777665 245889998732 23444445555567778887 56678888889988
Q ss_pred EEEEcccceEeeeecceeEEEEEccCCCEEEEEEec-ccCcEEEEEEccCCCeEE----EEcCCceEEEEEccCCee
Q psy11036 151 KIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSLCLASGGKRLI----SASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~----s~s~d~~i~iwd~~~~~~ 222 (239)
+||.++ . .+.....+.. +...+..+.++|+++.|+ +....++|++||+.+++.
T Consensus 387 ~l~~~~-----------------~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 387 QVLAFD-----------------L--DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEE-----------------T--TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEe-----------------C--CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 777554 1 1222333333 356788899999987665 223468999999988763
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.24 E-value=6.7e-09 Score=75.68 Aligned_cols=173 Identities=12% Similarity=0.029 Sum_probs=118.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLH 120 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~ 120 (239)
.-...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ ...........+.+..+.... ++.+.+||.. +.+.+.
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~-Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM-PPQRER 130 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT-TTEEEE
T ss_pred cccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC-cCcEEE
Confidence 345788887 4678888889999999999999988877 444444422333444444444 7999999998 888898
Q ss_pred EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC
Q psy11036 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 199 (239)
Q Consensus 121 ~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~ 199 (239)
++...... ..++ ++++.|+.+..++.|.++|.. .+.+.++. +...+. .-..+..+.|. +
T Consensus 131 ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~---------V~~~g~-------~v~~lNeLe~~-d 190 (268)
T 3nok_A 131 TTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ---------VKLRGQ-------PVELINELECA-N 190 (268)
T ss_dssp EEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE---------CEETTE-------ECCCEEEEEEE-T
T ss_pred EEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE---------eCCCCc-------ccccccccEEe-C
Confidence 88753322 3344 567777777778899998887 33332220 000000 01234567776 7
Q ss_pred CCeEEEEcCCceEEEEEccCCeeeEEecCC--------------CCeeeeEecC
Q psy11036 200 GKRLISASLDHHAKIYEMVNFSPVHTLDYP--------------SPVLSIDVSM 239 (239)
Q Consensus 200 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp 239 (239)
|+..+..-.+..|.+.|.++++.+..+... .-.+.+||+|
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 776766667889999999999999988732 3568888876
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=4.3e-09 Score=88.11 Aligned_cols=221 Identities=8% Similarity=0.016 Sum_probs=138.1
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccce----------------eec--cCCCCCeEEEEEecCCCCEEEEeeCCC--
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPL----------------MLY--STPQDYVRAGTVSPVSSDIVISGSYDK-- 65 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~----------------~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg-- 65 (239)
.+|.|+.+|..+|+.+..+.........+. ..+ .........++++| +..+++.+..++
T Consensus 188 ~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~ 266 (677)
T 1kb0_A 188 VRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSP 266 (677)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEES
T ss_pred CCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCcc
Confidence 378999999999999888765431100000 000 00001223578888 667777766553
Q ss_pred -----------------eEEEEeCCCCCceeeec---C-------CCCEEEEEEecCC---cEEEEeC-CCcEEEEEccC
Q psy11036 66 -----------------TVNVYDTRSPDPVMSVN---H-------GSPVESVLCLPSG---GIFVTGG-GLDVCIWDMLG 114 (239)
Q Consensus 66 -----------------~v~vw~~~~~~~~~~~~---~-------~~~v~~~~~~~~~---~~l~~~~-~~~i~~~d~~~ 114 (239)
.|..+|.++++.+..+. + ......+....+| ..++.+. +|.+.++|.+
T Consensus 267 w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~- 345 (677)
T 1kb0_A 267 WSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT- 345 (677)
T ss_dssp SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT-
T ss_pred ccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC-
Confidence 59999999999887663 2 1223333444467 5677776 7999999998
Q ss_pred CCeEEEEEeccCC-----------ce------------------------EEEEEcCCCCEEEEEecCCeEEEEEcc---
Q psy11036 115 GGKLLHKFTCHHK-----------TV------------------------TSLCLASGGKRLISASLDHHAKIYEMT--- 156 (239)
Q Consensus 115 ~~~~~~~~~~~~~-----------~i------------------------~~i~~~~~~~~l~~~~~d~~i~i~d~~--- 156 (239)
+++.+........ ++ ..++++|+...+++...+-...++...
T Consensus 346 tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (677)
T 1kb0_A 346 NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWE 425 (677)
T ss_dssp TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCC
T ss_pred CCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccc
Confidence 7777766542210 11 146788888888777665444333321
Q ss_pred -c-----------ceE-----eee----ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEE
Q psy11036 157 -L-----------KTV-----SSF----TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215 (239)
Q Consensus 157 -~-----------~~~-----~~~----~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iw 215 (239)
+ ... ... ...+.+..||+.+ ++.+..... ..++....+..++.+++.++.||.+++|
T Consensus 426 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~ 503 (677)
T 1kb0_A 426 FNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAY 503 (677)
T ss_dssp TTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEE
Confidence 0 000 000 0125688889877 555555442 3344455567778889999999999999
Q ss_pred EccCCeeeEEecCCC
Q psy11036 216 EMVNFSPVHTLDYPS 230 (239)
Q Consensus 216 d~~~~~~~~~~~~~~ 230 (239)
|.++++.+.++..+.
T Consensus 504 D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 504 HAATGEKLWEAPTGT 518 (677)
T ss_dssp ETTTCCEEEEEECSS
T ss_pred ECCCCceeeeeeCCC
Confidence 999999999998443
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=5.6e-09 Score=82.26 Aligned_cols=166 Identities=10% Similarity=0.116 Sum_probs=103.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee----e-cCCCC--EEEEEEecC-CcEEEEeC-CCcEEEEEcc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS----V-NHGSP--VESVLCLPS-GGIFVTGG-GLDVCIWDML 113 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~----~-~~~~~--v~~~~~~~~-~~~l~~~~-~~~i~~~d~~ 113 (239)
..+.+++++|+++. |+.+..++.|+.||..++..... . ..... ...++|+|+ +.++++.. .+.|..|+..
T Consensus 219 ~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 219 GKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp SCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 55778999994444 44466788999999987764332 1 11111 139999996 44444444 5889999875
Q ss_pred CCCeEEEEEeccC---------------CceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCC
Q psy11036 114 GGGKLLHKFTCHH---------------KTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177 (239)
Q Consensus 114 ~~~~~~~~~~~~~---------------~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~ 177 (239)
+. ...+.++. .....++++|+|+++++-. .++.|+.|++....+..+.|.....-+ . .
T Consensus 298 --g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~--~-~ 371 (409)
T 3hrp_A 298 --GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQ--I-D 371 (409)
T ss_dssp --CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSC--C-C
T ss_pred --CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCc--C-C
Confidence 33 33333322 3478999999999777777 789999999662223333211000000 0 0
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
+.. ....-.....++++++|.++++-..+++|+.++++
T Consensus 372 g~~---~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 372 GTP---LEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp BST---TTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCh---hceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 000 00012457899999999888888889999988763
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.22 E-value=8.4e-10 Score=92.76 Aligned_cols=191 Identities=12% Similarity=0.138 Sum_probs=118.1
Q ss_pred CCeEEEEEecCCCCEEEE-----eeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CC-----------
Q psy11036 43 DYVRAGTVSPVSSDIVIS-----GSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GL----------- 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s-----~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~----------- 105 (239)
..+..++|+| ++++|+- |+....|+++|+.+++.+...........++|+ |++.|+.+. +.
T Consensus 129 ~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 4688899999 7887773 333468999999999865432111113567899 999887776 42
Q ss_pred --cEEEEEccCCC---eEEEEEec-cCCceEEEEEcCCCCEEEEEec----CCeEEEEEcc-cc-eEeee----------
Q psy11036 106 --DVCIWDMLGGG---KLLHKFTC-HHKTVTSLCLASGGKRLISASL----DHHAKIYEMT-LK-TVSSF---------- 163 (239)
Q Consensus 106 --~i~~~d~~~~~---~~~~~~~~-~~~~i~~i~~~~~~~~l~~~~~----d~~i~i~d~~-~~-~~~~~---------- 163 (239)
.|.+|++.... ..+..... |......+.|+|||++|+.... ++.|+++|+. .. ....+
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 38899986322 12332233 4455788999999998765443 3589999976 21 22222
Q ss_pred -----------e----cceeEEEEEccCCCE-EEEEEecccCcEEEEEEccCCCeEEEEcC-Cc--eEEEEEccCCeeeE
Q psy11036 164 -----------T----GGLDVCIWDMLGGGK-LLHKFTCHHKTVTSLCLASGGKRLISASL-DH--HAKIYEMVNFSPVH 224 (239)
Q Consensus 164 -----------~----~~~~i~~~d~~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d~--~i~iwd~~~~~~~~ 224 (239)
+ ....|..+|+.+... ....+..|...+. .|+++++.|+.... ++ .|++|++..+ ...
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVR 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeE
Confidence 1 123477777765322 1234555665555 88999988876654 44 6899998744 445
Q ss_pred EecC--CCCeeeeEec
Q psy11036 225 TLDY--PSPVLSIDVS 238 (239)
Q Consensus 225 ~~~~--~~~v~~~~~s 238 (239)
.+.. .+.+..++++
T Consensus 364 ~l~~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGK 379 (693)
T ss_dssp EECCSSSSEEEECCCC
T ss_pred EeecCCCceEEeeecC
Confidence 5542 3345555443
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.22 E-value=1.1e-08 Score=85.89 Aligned_cols=220 Identities=9% Similarity=-0.004 Sum_probs=137.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCc--ee--ecccee--ecc-----------CCCCCeEEEEEecCCCCEEEEeeCCCe--
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHT--TI--YKVPLM--LYS-----------TPQDYVRAGTVSPVSSDIVISGSYDKT-- 66 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~--~~--~~~~~~--~~~-----------~~~~~v~~~~~~~~~~~~l~s~~~dg~-- 66 (239)
.+|.|+.||.++|+.+..+.... .. ...+.. ... ........+++.| ...+++.++.++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w 259 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLW 259 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESS
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCcc
Confidence 47899999999999988775311 00 000000 000 0001112578888 6778888877763
Q ss_pred -----------------EEEEeCCCCCceeeec---CC-------CCEEEEEEecCCc---EEEEeC-CCcEEEEEccCC
Q psy11036 67 -----------------VNVYDTRSPDPVMSVN---HG-------SPVESVLCLPSGG---IFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 67 -----------------v~vw~~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~-~~~i~~~d~~~~ 115 (239)
|..+|.++++.+..+. +. .+........+|+ .++.+. +|.++++|.+ +
T Consensus 260 ~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~-t 338 (689)
T 1yiq_A 260 DPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRA-T 338 (689)
T ss_dssp CHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT-T
T ss_pred ccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECC-C
Confidence 9999999999887663 21 2222223333565 566666 7999999998 7
Q ss_pred CeEEEEEeccCC---------------------------------------ceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 116 GKLLHKFTCHHK---------------------------------------TVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 116 ~~~~~~~~~~~~---------------------------------------~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
++.+........ .-..++++|+...+++...+....++...
T Consensus 339 G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 339 GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 777643321110 01126788888888888776655554433
Q ss_pred cc--------eEe------eee------------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 157 LK--------TVS------SFT------------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 157 ~~--------~~~------~~~------------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
.. ... .+. -.+.+..||+.+ ++.+.....+. ++....+...+.+++.++.||
T Consensus 419 ~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg 496 (689)
T 1yiq_A 419 EAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADG 496 (689)
T ss_dssp SCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTS
T ss_pred ccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCC
Confidence 11 000 000 026689999987 55555555433 233335666788999999999
Q ss_pred eEEEEEccCCeeeEEecCC
Q psy11036 211 HAKIYEMVNFSPVHTLDYP 229 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~ 229 (239)
.++.||.++|+.+.+++.+
T Consensus 497 ~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 497 RVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEETTTCCEEEEEECS
T ss_pred cEEEEECCCCccceeeeCC
Confidence 9999999999999988754
No 226
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.21 E-value=3.9e-08 Score=71.03 Aligned_cols=174 Identities=12% Similarity=0.064 Sum_probs=116.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK--TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~ 118 (239)
.-...+.|++ +.++.+.+.+| .|+.+|+.+++....+............+.+..+.... ++.+.+||.. +.+.
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-TLTP 97 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TTEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-cCcE
Confidence 5677899985 56777777654 89999999999988875444443333333455555555 7999999998 8888
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
+.++...... ..++ ++++.|+.+..++.|.++|.. .+.+.++. +...+.+ -..+..+.+.
T Consensus 98 ~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~---------V~~~g~~-------~~~lNeLe~~ 158 (243)
T 3mbr_X 98 RARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK---------VTAGGRP-------LDNLNELEWV 158 (243)
T ss_dssp EEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEE---------CEETTEE-------CCCEEEEEEE
T ss_pred EEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEE---------EccCCcc-------cccceeeEEe
Confidence 9888854333 3444 567767666678889988887 33322220 0000110 1234556654
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEecCC--------------CCeeeeEecC
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLDYP--------------SPVLSIDVSM 239 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp 239 (239)
+|+..+..-.+..|.+.|.++++.+..+... .-.+.+|++|
T Consensus 159 -~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA 213 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET
T ss_pred -CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC
Confidence 6776766667889999999999999988722 2567888876
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=3e-09 Score=83.69 Aligned_cols=183 Identities=10% Similarity=0.017 Sum_probs=122.4
Q ss_pred CCCEEEEeeC-C----CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-----------CCcEEEEEccCCCe
Q psy11036 54 SSDIVISGSY-D----KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-----------GLDVCIWDMLGGGK 117 (239)
Q Consensus 54 ~~~~l~s~~~-d----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~~~d~~~~~~ 117 (239)
+++.+++... + +.|.++|..+++.+.++...... .++++|+++.++++. ++.|.++|.. +.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-TFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-CCc
Confidence 4555544433 3 69999999999999888543334 899999999888775 4679999998 777
Q ss_pred EEEEEecc-------CCceEEEEEcCCCCEEEEEec--CCeEEEEEcc-cceEeeee-------------------ccee
Q psy11036 118 LLHKFTCH-------HKTVTSLCLASGGKRLISASL--DHHAKIYEMT-LKTVSSFT-------------------GGLD 168 (239)
Q Consensus 118 ~~~~~~~~-------~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~-~~~~~~~~-------------------~~~~ 168 (239)
.+..+.-. ......+.++|||++++++.. ++.|.+.|+. .+.+.++. +++.
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSS
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCC
Confidence 77776532 123467899999999998874 5789999998 44444332 2222
Q ss_pred EEEEEccCCCEEE------------------------------------EEEeccc-----------------------C
Q psy11036 169 VCIWDMLGGGKLL------------------------------------HKFTCHH-----------------------K 189 (239)
Q Consensus 169 i~~~d~~~~~~~~------------------------------------~~~~~h~-----------------------~ 189 (239)
+.+.+... .+.. ..+.... .
T Consensus 241 ~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 241 LARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp EEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 33333311 1100 0000000 0
Q ss_pred cEEEEEEccCCCeEEEEc----------CCceEEEEEccCCeeeEEecCCCCeeeeEecC
Q psy11036 190 TVTSLCLASGGKRLISAS----------LDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 239 (239)
....++++|+++.++... .++.|.++|..+++.+.++........++|+|
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~sp 379 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQ 379 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECC
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEcc
Confidence 011267888888766553 24689999999999999998777788888876
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.18 E-value=2.4e-08 Score=76.24 Aligned_cols=164 Identities=12% Similarity=0.050 Sum_probs=102.6
Q ss_pred EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeC------CCeEEEEeCCCCCceeeec
Q psy11036 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSY------DKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 9 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------dg~v~vw~~~~~~~~~~~~ 82 (239)
.|++||.++++......... ......+.+++++| +++++++... .+.|..++ +++......
T Consensus 110 gl~~~d~~~g~~~~~~~~~~----------~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~ 176 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELES----------DLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA 176 (326)
T ss_dssp EEEEEETTTCCEEEEECSST----------TCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE
T ss_pred CEEEEECCCCcEEEEeeCCC----------CCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC
Confidence 47778877766432221100 00013588999999 6777665432 24565566 444332223
Q ss_pred CCCCEEEEEEecCCcEEEEeC--CCcEEEEEcc-CCC-e-----EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG--GLDVCIWDML-GGG-K-----LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~-~~~-~-----~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
.......++|+|+++.++.+. ++.|.+|++. ..+ . .+..+.........+++.++|+++++...++.|.+|
T Consensus 177 ~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 177 DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 334567899999998776554 5889999985 123 2 222232334567889999999877777667888888
Q ss_pred EcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc-cCCCeEEEE
Q psy11036 154 EMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA-SGGKRLISA 206 (239)
Q Consensus 154 d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~ 206 (239)
|.. ++.+..+..+...+.+++|+ |+++.|+.+
T Consensus 257 d~~---------------------g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 257 DTD---------------------GNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp CTT---------------------CCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred CCC---------------------CCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 765 33444445556679999998 887766444
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.18 E-value=7.5e-09 Score=76.11 Aligned_cols=175 Identities=11% Similarity=0.010 Sum_probs=120.1
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC-C
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG-S 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~ 85 (239)
++.|++.|+.+++.+..+..... .....+++. ++.+.++.-.++.+.++|..+.+.+.++... .
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~-------------~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~ 107 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDS-------------YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK 107 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTT-------------CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS
T ss_pred CCEEEEEECCCCCEEEEEecCCC-------------cceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC
Confidence 57999999999999888764320 223355665 3456666667899999999999988888543 2
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-----CceEEEEEcCCCCEEEEEecCCeEEEEEcccce
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-----KTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~ 159 (239)
. ...++++++.++++. ++.|.++|.. +.+....+.-.. ..+..+.|. +|...+....++.|.+.|..
T Consensus 108 ~--g~glt~Dg~~l~vs~gs~~l~viD~~-t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~--- 180 (266)
T 2iwa_A 108 D--GWGLATDGKILYGSDGTSILYEIDPH-TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK--- 180 (266)
T ss_dssp S--CCEEEECSSSEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT---
T ss_pred C--eEEEEECCCEEEEECCCCeEEEEECC-CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC---
Confidence 2 244566777776666 6899999998 667777665322 135678887 67655555567889988887
Q ss_pred EeeeecceeEEEEEccCCCEEEEEEecc-------------cCcEEEEEEccCCC-eEEEEcCCceEEEEEccCC
Q psy11036 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCH-------------HKTVTSLCLASGGK-RLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 160 ~~~~~~~~~i~~~d~~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~ 220 (239)
+++.+..+... ......++|+|+++ +++++...++|...++...
T Consensus 181 -----------------tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 181 -----------------DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -----------------TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -----------------CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 23333333211 13468999999876 5566767889999888654
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.15 E-value=3e-08 Score=74.92 Aligned_cols=165 Identities=8% Similarity=-0.046 Sum_probs=101.0
Q ss_pred CCeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~ 119 (239)
.......|+| +++ ++++...++.|..|+. +++. ..+ .....+..++++++|+++++.. ++.|.+|+.. ++..
T Consensus 45 ~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~ 119 (305)
T 3dr2_A 45 TWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAH 119 (305)
T ss_dssp SSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEE
T ss_pred cCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEE
Confidence 6678999999 565 7788888899999998 4543 333 4567789999999999777665 4789999875 3322
Q ss_pred EEEecc----CCceEEEEEcCCCCEEEE----EecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 120 HKFTCH----HKTVTSLCLASGGKRLIS----ASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 120 ~~~~~~----~~~i~~i~~~~~~~~l~~----~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
...... ...+..++++++|+.+++ |..+. ..+.....-.+...|..+|..+ ++.... . .....
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~------~~~~~~~~~~~~~~v~~~d~~~-g~~~~~-~-~~~~p 190 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP------SQGCPADPELAHHSVYRLPPDG-SPLQRM-A-DLDHP 190 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG------GGSCCCCCSSSCEEEEEECSSS-CCCEEE-E-EESSE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc------ccccccccccCCCeEEEEcCCC-CcEEEE-e-cCCCC
Confidence 211111 134677999999987776 32210 0000000000111233333322 111111 1 23456
Q ss_pred EEEEEccCCCeEEEEcCC------ceEEEEEccCCe
Q psy11036 192 TSLCLASGGKRLISASLD------HHAKIYEMVNFS 221 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d------~~i~iwd~~~~~ 221 (239)
..++|+||++.|+.+... +.|++|++..+.
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 789999999977766554 789999987654
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.13 E-value=1.1e-08 Score=74.44 Aligned_cols=175 Identities=11% Similarity=-0.056 Sum_probs=111.3
Q ss_pred CCCCC--EEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeE--EEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee
Q psy11036 4 DLPIL--IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVR--AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM 79 (239)
Q Consensus 4 ~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 79 (239)
+|.+| .|+++|+++++.++.+.... ... .++.. ++++.+..-.++.+.++|..+.+.+.
T Consensus 59 tG~~g~S~v~~vD~~Tgkv~~~~~l~~---------------~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 59 TGLNGRSSIRKVDIESGKTLQQIELGK---------------RYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEETTEEEEEEECTTTCCEEEEEECCT---------------TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCCCCceEEEEECCCCcEEEEEecCC---------------ccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence 34444 89999999999988887653 233 34443 44555555678999999999999999
Q ss_pred eecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-----CceEEEEEcCCCCEEEEEecCCeEEEE
Q psy11036 80 SVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-----KTVTSLCLASGGKRLISASLDHHAKIY 153 (239)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~~d~~i~i~ 153 (239)
++.....- ..+.+++..++.+. ++.|.++|.. +.+.+.++.... ..++.+.|. +|+..+..-.++.|.+.
T Consensus 122 ti~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~-T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 122 SFNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPE-SLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRI 197 (262)
T ss_dssp EEECSSCC--CCEEECSSCEEECCSSSEEEEECTT-TCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCCc--eEEecCCCEEEEECCCCeEEEEcCC-CCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEE
Confidence 88544322 33345677666665 6889999998 777777765422 234557776 67666666578889999
Q ss_pred Ecc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcC
Q psy11036 154 EMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 154 d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
|.+ ++.+..+ |+..-.........-..-...|+++|+++.|+..+.
T Consensus 198 Dp~tG~V~~~I---------d~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 198 DPETGKVTGII---------DLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CTTTCBEEEEE---------ECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCCCcEEEEE---------ECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 888 4443333 221100000000011234688999998776666554
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=4.3e-07 Score=67.13 Aligned_cols=159 Identities=9% Similarity=-0.016 Sum_probs=101.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~ 119 (239)
..+..+++++.++.++++-..++.|..++.........+. .......++++|++..++.+. .+.|.++++. .....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC-CCCEE
Confidence 4578999999545566666677899999997665443333 235788999999766666554 5889999986 32222
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEec---CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASL---DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
............++++|++..|..+.. .+.|..+++++... +.+ ..........+++
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~------------------~~~--~~~~~~~P~gia~ 174 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR------------------RIL--AQDNLGLPNGLTF 174 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC------------------EEE--ECTTCSCEEEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc------------------EEE--EECCCCCCcEEEE
Confidence 222222245689999997665555543 35777777662111 111 1122245678999
Q ss_pred ccCCCeE-EEEcCCceEEEEEccCCee
Q psy11036 197 ASGGKRL-ISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 197 s~~~~~l-~s~s~d~~i~iwd~~~~~~ 222 (239)
+|++..| ++-...+.|.++|+.....
T Consensus 175 d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 175 DAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEecCCCce
Confidence 9976655 5556678999999875443
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.10 E-value=9.9e-09 Score=78.92 Aligned_cols=180 Identities=8% Similarity=0.013 Sum_probs=115.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee---CCCeEEEEeCCCCCceeeec-
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS---YDKTVNVYDTRSPDPVMSVN- 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~v~vw~~~~~~~~~~~~- 82 (239)
++.|.+||+.+++.+..+..+.. ...+...+..+++++.++..+++.. .++.|.+||+.+++....+.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~--------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPP--------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTT--------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred CCeEEEEECCCCeEEEEEECChh--------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 46788899888887766654320 0011145689999984455556655 67899999998776555431
Q ss_pred C-----------------------------CCCEEEEEEecCCcEEEEeC-C-CcEEEEEccC--CCe--------EEEE
Q psy11036 83 H-----------------------------GSPVESVLCLPSGGIFVTGG-G-LDVCIWDMLG--GGK--------LLHK 121 (239)
Q Consensus 83 ~-----------------------------~~~v~~~~~~~~~~~l~~~~-~-~~i~~~d~~~--~~~--------~~~~ 121 (239)
| ...+..++++|+++.|+++. . ..+..++... ... .+.
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 242 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE- 242 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-
T ss_pred CCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-
Confidence 1 12368899999998888776 3 4555554320 100 011
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-cccCcEEEEEEccCC
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGG 200 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~~~ 200 (239)
..++......++++++|+.+++...++.|.+||.. .++...... .+...+.+++|.+++
T Consensus 243 ~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~--------------------~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 243 RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA--------------------DRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT--------------------TTEEEEEEECGGGSCEEEEEECTTS
T ss_pred ecccCCCCceEEECCCCCEEEEccCCCeEEEEECC--------------------CCCEEEEEECCceecCCeeEECCCC
Confidence 11334456679999999999998889999999983 122211111 124568899999999
Q ss_pred CeEEEEcCCceEEEE
Q psy11036 201 KRLISASLDHHAKIY 215 (239)
Q Consensus 201 ~~l~s~s~d~~i~iw 215 (239)
+++++.+..+.+.+|
T Consensus 303 ~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 303 YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEEECCGGGSGGG
T ss_pred cEEEEeCcccccccc
Confidence 988888766555444
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.08 E-value=3.1e-08 Score=80.20 Aligned_cols=200 Identities=14% Similarity=0.058 Sum_probs=131.7
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEE-e-cCCCCEEEEee------------------
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV-S-PVSSDIVISGS------------------ 62 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~l~s~~------------------ 62 (239)
.+..++.|.+.|+++.+..+.+..... .....+++ . | ++.++++++
T Consensus 107 nd~~~~rVavIdl~t~~~~~ii~ip~g-------------~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 107 NDKANTRVARVRCDVMKCDAILEIPNA-------------KGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSSC-------------CSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGG
T ss_pred EcCCCCEEEEEECCCceEeeEEeCCCC-------------CCCcceeeeecC-CCcEEEEecccccccCCCCcccccccc
Confidence 445678899999999998885543210 45778888 4 7 677776663
Q ss_pred CCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CC------------------------------------
Q psy11036 63 YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GL------------------------------------ 105 (239)
Q Consensus 63 ~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~------------------------------------ 105 (239)
.++.+.+.|..+.+...++...+....++++|+|+++++++ +.
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 34689999999988888875444567788999999988887 21
Q ss_pred --cEEEEEccCC-CeE-EEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcc-cceEeeeecceeEEEEEccCCCE
Q psy11036 106 --DVCIWDMLGG-GKL-LHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGK 179 (239)
Q Consensus 106 --~i~~~d~~~~-~~~-~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~ 179 (239)
.|.+.|.+.. +.. +..+... ....++.++|||+++++++ .+.+|.++|+. .+.. +.+. +.....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~~-------l~~~~~ 322 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYEN-------ADPRSA 322 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHSC-------CCGGGG
T ss_pred ECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--cccc-------cCcccc
Confidence 3666666520 223 4445432 3456799999999776655 57899999988 1100 0000 000011
Q ss_pred EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC----------CeeeEEec
Q psy11036 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN----------FSPVHTLD 227 (239)
Q Consensus 180 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~----------~~~~~~~~ 227 (239)
....... ......++|+|+|...++.-.|++|.+||+.+ .+.+.++.
T Consensus 323 v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid 379 (595)
T 1fwx_A 323 VVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD 379 (595)
T ss_dssp EEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE
T ss_pred eEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee
Confidence 2222222 34577899999995455667899999999977 56677776
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.08 E-value=2.9e-08 Score=72.38 Aligned_cols=174 Identities=9% Similarity=0.007 Sum_probs=111.6
Q ss_pred CCCCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCe--EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee
Q psy11036 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYV--RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80 (239)
Q Consensus 3 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 80 (239)
.+|.+|.|+++|+++++.++.+ .. ... ..+++. ++++.+..-.++.+.+||..+.+.+.+
T Consensus 70 stG~~g~v~~iD~~Tgkv~~~~-l~---------------~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 70 STGHQGTLRQLSLESAQPVWME-RL---------------GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EETTTTEEEECCSSCSSCSEEE-EC---------------TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEECCCCcEEeEE-CC---------------CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4577888999999999988877 33 223 335554 456666667889999999999999998
Q ss_pred ecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-----CceEEEEEcCCCCEEEEEecCCeEEEEE
Q psy11036 81 VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-----KTVTSLCLASGGKRLISASLDHHAKIYE 154 (239)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~~d~~i~i~d 154 (239)
+.....-..++ ++++.|+.+. ++.|.++|.. +.+.+.++.... ..++.+.|. +|+.++..-.++.|.+.|
T Consensus 132 i~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~-T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPD-GFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECSSCCCCEE--EETTEEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCCCceeEEe--cCCCEEEEECCCCEEEEEcCC-CCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 85443333444 5577777666 7899999988 777777765422 134667776 776665555688888888
Q ss_pred cc-cceEeeeecceeEEEEEccCCCEEEE-EEecccCcEEEEEEccCCCeEEEEc
Q psy11036 155 MT-LKTVSSFTGGLDVCIWDMLGGGKLLH-KFTCHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 155 ~~-~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.+ ++.+..+ |+..-..... ....-..-...|+++|+++.|+..+
T Consensus 208 p~TG~V~~~I---------dl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVI---------DASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEE---------ECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEE---------ECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 87 4443333 2110000000 0001123568899999765554443
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=1.1e-11 Score=96.32 Aligned_cols=147 Identities=11% Similarity=0.101 Sum_probs=81.6
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC-ceE-
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK-TVT- 130 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-~i~- 130 (239)
.+..+++++.|+.|+.||..+++.+..+.. ..+.+..+..++..+++++ ++.|..||.. +++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeeccCcccccc
Confidence 467888999999999999999999887754 5555555556777777765 8999999997 5555444432211 110
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCc
Q psy11036 131 SLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDH 210 (239)
Q Consensus 131 ~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 210 (239)
...+. ++..+++++.|+.++.||.+ +++.+..+..+. ...++|++..+++++.|+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~--------------------tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLL--------------------TGEKQQTLSSAF----ADSLSPSTSLLYLGRTEY 140 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC----------------------------------------------EEEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECC--------------------CCcEEEEecCCC----cccccccCCEEEEEecCC
Confidence 00111 34567788889999999987 233333323222 134567888899999999
Q ss_pred eEEEEEccCCeeeEEec
Q psy11036 211 HAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 211 ~i~iwd~~~~~~~~~~~ 227 (239)
.|+.||.++|+.+.++.
T Consensus 141 ~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 141 TITMYDTKTRELRWNAT 157 (369)
T ss_dssp EEECCCSSSSSCCCEEE
T ss_pred EEEEEECCCCCEEEeEe
Confidence 99999999998776553
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.06 E-value=6.7e-09 Score=84.00 Aligned_cols=187 Identities=12% Similarity=0.101 Sum_probs=122.9
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCC---------------------
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK--------------------- 65 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--------------------- 65 (239)
++.+.+.|.++.+...++.... ....++++| ++.++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg---------------~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~ 237 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG---------------NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFN 237 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS---------------CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEE
T ss_pred CceEEEEECCCCeEEEEEEeCC---------------CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEee
Confidence 4789999999998888776542 234566788 567666666442
Q ss_pred -----------------eEEEEeCCC--CCc-eeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCe------
Q psy11036 66 -----------------TVNVYDTRS--PDP-VMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGK------ 117 (239)
Q Consensus 66 -----------------~v~vw~~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~------ 117 (239)
.|.+.|.++ ++. +..+.......++.++|||+++++++ +..|.++|+. ..+
T Consensus 238 ~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~-~~~~~~~~~ 316 (595)
T 1fwx_A 238 IAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT-RFDAVFYEN 316 (595)
T ss_dssp HHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG-GHHHHHHSC
T ss_pred ccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc-ccccccccc
Confidence 477778777 444 45555555677899999999999988 6899999997 331
Q ss_pred ------EEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 118 ------LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 118 ------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
....... ......++|+|+|...++.-.|++|.+||+... +..+.|. ...+.+..+..|.++-
T Consensus 317 l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a-~~~~~g~---------~~~~vi~kidV~yqpG 385 (595)
T 1fwx_A 317 ADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA-IRAYAGE---------KVDPIKDKLDVHYQPG 385 (595)
T ss_dssp CCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHH-HHHHHTC---------SCCCEEEEEECSSCEE
T ss_pred cCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHh-hhhhccc---------ccceeEEEeecccccc
Confidence 3344433 345678999999955556777999999998710 0001010 0134445555554432
Q ss_pred -----EEEEEccCCCeEEEEcC---Cce----------EEEEEccCCe
Q psy11036 192 -----TSLCLASGGKRLISASL---DHH----------AKIYEMVNFS 221 (239)
Q Consensus 192 -----~~~~~s~~~~~l~s~s~---d~~----------i~iwd~~~~~ 221 (239)
..+.++|||++|+++.. |.. -.++|+..++
T Consensus 386 h~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 386 HLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred cceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 12356899999998753 443 2889996544
No 238
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=1.2e-08 Score=78.97 Aligned_cols=107 Identities=11% Similarity=0.050 Sum_probs=80.7
Q ss_pred EEEEecCCCCEEEEeeC-----CCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-----------CCcEEEE
Q psy11036 47 AGTVSPVSSDIVISGSY-----DKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-----------GLDVCIW 110 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~-----dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~~~ 110 (239)
.....| +++.+++... ++.|.+.|..+++.+..+....... ++++|+|+.++++. ++.|.+|
T Consensus 37 ~~~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 344567 5666655544 6799999999999988885333334 99999999887764 3679999
Q ss_pred EccCCCeEEEEEeccC-------CceEEEEEcCCCCEEEEEec--CCeEEEEEcc
Q psy11036 111 DMLGGGKLLHKFTCHH-------KTVTSLCLASGGKRLISASL--DHHAKIYEMT 156 (239)
Q Consensus 111 d~~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~ 156 (239)
|.. +.+.+.++.... .....++++|||++++++.. ++.|.++|+.
T Consensus 115 D~~-t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 115 DPV-TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp CTT-TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred ECC-CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 998 777777775321 23567999999999888764 6899999998
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.04 E-value=9.3e-09 Score=79.52 Aligned_cols=98 Identities=10% Similarity=-0.118 Sum_probs=74.5
Q ss_pred EEEEeeCCC----eEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-----------CCcEEEEEccCCCeEEEE
Q psy11036 57 IVISGSYDK----TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-----------GLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 57 ~l~s~~~dg----~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~~i~~~d~~~~~~~~~~ 121 (239)
.+++...+. +|.++|..+++.+.++.....- .+.++|+++.++++. ++.|.+||+. +.+.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-TFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-TCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC-CCCEEEE
Confidence 444444444 8889999999999888433323 799999999888875 4789999999 8888888
Q ss_pred EeccC-------CceEEEEEcCCCCEEEEEec--CCeEEE--EEcc
Q psy11036 122 FTCHH-------KTVTSLCLASGGKRLISASL--DHHAKI--YEMT 156 (239)
Q Consensus 122 ~~~~~-------~~i~~i~~~~~~~~l~~~~~--d~~i~i--~d~~ 156 (239)
+.... .....++++|||++++++.. +..+.+ +|+.
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 76431 23467999999999998875 467888 8875
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.02 E-value=1.6e-07 Score=67.84 Aligned_cols=173 Identities=9% Similarity=-0.003 Sum_probs=108.9
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCE
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPV 87 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v 87 (239)
..|+.+|+++++.++.+..... ---..+++. ++++....-.++.+.++|..+.+.+.++.....-
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~-------------~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPP-------------YFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTT-------------CCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC
T ss_pred ceEEEEECCCCCEEEEEeCCCC-------------cceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc
Confidence 4899999999999988876530 111234443 4556666667899999999999999988544433
Q ss_pred EEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccC-----CceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceE
Q psy11036 88 ESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-----KTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 88 ~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
..++ +++..|+++. ++.|.++|.. +.+.+.++.-.. ..++.+.+. +|+.++..-.+..|.+.|.+ ++.+
T Consensus 108 wglt--~dg~~L~vSdgs~~l~~iDp~-t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 108 WALT--SDDSHLYMSDGTAVIRKLDPD-TLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp CEEE--ECSSCEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEE
T ss_pred eEEe--eCCCEEEEECCCCeEEEEeCC-CCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEE
Confidence 3444 5566666555 7889999998 777777766422 244566665 66666655567889888888 4443
Q ss_pred eeeecceeEEEEEccCCCEEEEEE-ecccCcEEEEEEccCCCeEEEEcC
Q psy11036 161 SSFTGGLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASL 208 (239)
Q Consensus 161 ~~~~~~~~i~~~d~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~ 208 (239)
..+ |+..-....... ..-..-...++++|+++.|+..+.
T Consensus 184 ~~i---------dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 184 AWI---------DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEE---------ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEE---------ECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 333 211100000000 011235688999997666555443
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.01 E-value=1.5e-07 Score=73.11 Aligned_cols=200 Identities=13% Similarity=0.052 Sum_probs=121.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.++.|+.+|.++++.+..+.... ......... +..++.++.++.|..+|..+++.+.......
T Consensus 111 ~~g~l~a~d~~tG~~~W~~~~~~--------------~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 111 EKAQVYALNTSDGTVAWQTKVAG--------------EALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECSS--------------CCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCCEEEEEECCCCCEEEEEeCCC--------------ceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 46889999999999887776553 111111222 3477778889999999999999887764333
Q ss_pred CEE------EEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCc----eE---EEEEcC--CCCEEEEEecCCe
Q psy11036 86 PVE------SVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT----VT---SLCLAS--GGKRLISASLDHH 149 (239)
Q Consensus 86 ~v~------~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~----i~---~i~~~~--~~~~l~~~~~d~~ 149 (239)
++. ..... ++ .++++. ++.+..+|.. +++.+......... +. .+.-.| .+..++.++.++.
T Consensus 174 ~~~~~~~~~~~~~~-~~-~v~~g~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~ 250 (376)
T 3q7m_A 174 PSLSLRGESAPTTA-FG-AAVVGGDNGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN 250 (376)
T ss_dssp -----CCCCCCEEE-TT-EEEECCTTTEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC
T ss_pred CceeecCCCCcEEE-CC-EEEEEcCCCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE
Confidence 221 11222 34 455555 7899999998 66666555422100 00 010111 2456777778889
Q ss_pred EEEEEcc-cceEeee------------------ecceeEEEEEccCCCEEEEEEec-ccCcEEEEEEccCCCeEEEEcCC
Q psy11036 150 AKIYEMT-LKTVSSF------------------TGGLDVCIWDMLGGGKLLHKFTC-HHKTVTSLCLASGGKRLISASLD 209 (239)
Q Consensus 150 i~i~d~~-~~~~~~~------------------~~~~~i~~~d~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d 209 (239)
+..+|.+ ++.+... +.++.+..+|..+. +.+..... ....+..... .+..|+.++.+
T Consensus 251 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~ 327 (376)
T 3q7m_A 251 LTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLTSPVL--YNGNLVVGDSE 327 (376)
T ss_dssp EEEEETTTCCEEEEECCCCEEEEEEETTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCCCCEE--ETTEEEEECTT
T ss_pred EEEEECCCCcEEeeccCCCCCCceEECCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCcccCCEE--ECCEEEEEeCC
Confidence 9999886 5444332 22345777887664 44443331 1222222222 25678888899
Q ss_pred ceEEEEEccCCeeeEEecC
Q psy11036 210 HHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~ 228 (239)
|.|..+|..+++.+.....
T Consensus 328 g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 328 GYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEec
Confidence 9999999999999887764
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=1.2e-07 Score=74.36 Aligned_cols=170 Identities=14% Similarity=0.104 Sum_probs=112.4
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEee-------------------CCCeE
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGS-------------------YDKTV 67 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-------------------~dg~v 67 (239)
.|.|.++|.++++.+.++..... +..--..+.|+| +++.+++.. .+.+|
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~-----------~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRG-----------DQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCT-----------TCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred CCeEEEEECCCCeEEEEEccCCC-----------CccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEE
Confidence 47899999999999988874420 002244688899 788888874 46899
Q ss_pred EEEeCCCCCceeeecCC---CCEEEEEE--ecCCcEEEEeC-------CCcEEEEEccCCCeE--EEEE--ecc------
Q psy11036 68 NVYDTRSPDPVMSVNHG---SPVESVLC--LPSGGIFVTGG-------GLDVCIWDMLGGGKL--LHKF--TCH------ 125 (239)
Q Consensus 68 ~vw~~~~~~~~~~~~~~---~~v~~~~~--~~~~~~l~~~~-------~~~i~~~d~~~~~~~--~~~~--~~~------ 125 (239)
.+||+.+++.+.++... .....++| +|++++++++. +++|.+|..+ .+.. .+.+ ...
T Consensus 231 ~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d-~g~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 231 HFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE-DGKWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp EEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE-TTEEEEEEEEEECCEECCSSC
T ss_pred EEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec-CCceeEEEEEeCCCccccccc
Confidence 99999988777777443 34556666 99999877654 3577776655 2321 1111 110
Q ss_pred ----------CCceEEEEEcCCCCEEEEEec-CCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecc------
Q psy11036 126 ----------HKTVTSLCLASGGKRLISASL-DHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCH------ 187 (239)
Q Consensus 126 ----------~~~i~~i~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h------ 187 (239)
......|.+++||++|.++.. .+.|.+||+. .. ..+.+..+...
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~------------------~~~lv~~I~tGG~~~~~ 371 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF------------------KPVLTGKVKLGGIFHRA 371 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT------------------SCEEEEEEECBTTTTCB
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC------------------CcEEEEEEEeCCeeccc
Confidence 234688999999998887765 6788888875 10 01222222111
Q ss_pred --------cCcEEEEEEccCCCeEEEEc
Q psy11036 188 --------HKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 188 --------~~~v~~~~~s~~~~~l~s~s 207 (239)
.+.-..++++|||++|+++.
T Consensus 372 ~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 372 DHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11356789999999998887
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.96 E-value=1.7e-06 Score=67.19 Aligned_cols=206 Identities=10% Similarity=0.056 Sum_probs=121.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~ 85 (239)
.++.|+.+|.++++.+..+....... ........+.+.-.. .+..++.++.++.|..+|..+++.........
T Consensus 61 ~~g~v~a~d~~tG~~~W~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~ 133 (376)
T 3q7m_A 61 RAGLVKALNADDGKEIWSVSLAEKDG-----WFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG 133 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC--------CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCeEEEEEccCCceeeeecCccccc-----cccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC
Confidence 36789999999999887666532000 000000233222222 34577778889999999999999877664332
Q ss_pred CEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCCce-----EEEEEcCCCCEEEEEecCCeEEEEEcc-cc
Q psy11036 86 PVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTV-----TSLCLASGGKRLISASLDHHAKIYEMT-LK 158 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i-----~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~ 158 (239)
.+...-...++ .++++. ++.+..+|.. +++.+.......... ...... +..++.++.++.+..+|.+ ++
T Consensus 134 ~~~~~p~~~~~-~v~v~~~~g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 134 EALSRPVVSDG-LVLIHTSNGQLQALNEA-DGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp CCCSCCEEETT-EEEEECTTSEEEEEETT-TCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCC
T ss_pred ceEcCCEEECC-EEEEEcCCCeEEEEECC-CCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCc
Confidence 22111111244 444554 7999999998 677666555322111 112222 4567778888999999986 44
Q ss_pred eEeeee-------------------------------cceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc
Q psy11036 159 TVSSFT-------------------------------GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 159 ~~~~~~-------------------------------~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.+.... ..+.+..+|..+. +.+.... ......+.. ++..++.++
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG-~~~w~~~--~~~~~~~~~--~~~~l~~~~ 284 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG-QIMWKRE--LGSVNDFIV--DGNRIYLVD 284 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC-CEEEEEC--CCCEEEEEE--ETTEEEEEE
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC-cEEeecc--CCCCCCceE--ECCEEEEEc
Confidence 433221 1233666776653 3333332 122334433 356777788
Q ss_pred CCceEEEEEccCCeeeEEec
Q psy11036 208 LDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++.|..+|..+++.+....
T Consensus 285 ~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 285 QNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp TTCCEEEEETTTCCEEEEEC
T ss_pred CCCeEEEEECCCCcEEEeec
Confidence 89999999999999887665
No 244
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=3.8e-07 Score=76.72 Aligned_cols=176 Identities=11% Similarity=0.063 Sum_probs=107.2
Q ss_pred CCEEEEeeCCCcce--eeee--eC-CceeeccceeeccCCCCCeEEEEEecCCCCEEEE-ee---CCCeEEEEeCCCCC-
Q psy11036 7 ILIVALWDIPSEAQ--VSTF--TN-HTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVIS-GS---YDKTVNVYDTRSPD- 76 (239)
Q Consensus 7 dg~i~vwd~~~~~~--~~~~--~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~~---~dg~v~vw~~~~~~- 76 (239)
...|++|++.+++. ...+ .. +. .....+.|+| ++++|+. .+ .+..|.++|+.++.
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~--------------~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~ 271 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQH--------------HRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENA 271 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGC--------------CSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTC
T ss_pred CcEEEEEECCCCcccceEEEecCCCCC--------------eEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCC
Confidence 35688888876542 2222 22 33 5578999999 6776643 33 23589999998763
Q ss_pred ceeee-cCCCCEEEEEEecCCcEEE-EeC-C---CcEEEEEccCCCeE--EEEEeccCCceEEEEEcCCCCEEEEEecCC
Q psy11036 77 PVMSV-NHGSPVESVLCLPSGGIFV-TGG-G---LDVCIWDMLGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 77 ~~~~~-~~~~~v~~~~~~~~~~~l~-~~~-~---~~i~~~d~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
....+ .+....... +++++..++ .+. + +.|..+|+. .+.. ...+..|...+. .|+++++.|+....++
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA-NPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT-SCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC-CCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 33333 444444444 566555554 443 2 568888987 3332 345556666655 8889998887766544
Q ss_pred ---eEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-cccCcEEEEEEccCCCeEEEEcCC----ceEEEEEccCC
Q psy11036 149 ---HAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISASLD----HHAKIYEMVNF 220 (239)
Q Consensus 149 ---~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d----~~i~iwd~~~~ 220 (239)
.|++|++.+. ....+. ...+.+..+.++++++.|+....+ +.++.||+.++
T Consensus 348 g~~~l~~~d~~g~---------------------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 348 ATARVEQFDYEGK---------------------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp TEEEEEEECTTSC---------------------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred CeeEEEEEECCCC---------------------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 5666666521 222222 234567777888888766554433 78999998777
Q ss_pred ee
Q psy11036 221 SP 222 (239)
Q Consensus 221 ~~ 222 (239)
+.
T Consensus 407 ~~ 408 (693)
T 3iuj_A 407 AI 408 (693)
T ss_dssp CE
T ss_pred eE
Confidence 53
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=4.5e-07 Score=75.86 Aligned_cols=221 Identities=10% Similarity=0.061 Sum_probs=128.0
Q ss_pred CCCEEEEeeCCCcceeeeeeCCc--eee--cccee--ecc-----------CCCCCeEEEEEecCCCCEEEEeeCCC---
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHT--TIY--KVPLM--LYS-----------TPQDYVRAGTVSPVSSDIVISGSYDK--- 65 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~--~~~--~~~~~--~~~-----------~~~~~v~~~~~~~~~~~~l~s~~~dg--- 65 (239)
.+|.|+.+|.++|+.+..+.... ... ..+.. ... ........+++.| ...+++.++.++
T Consensus 176 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w 254 (668)
T 1kv9_A 176 VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPW 254 (668)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESS
T ss_pred CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCcc
Confidence 46899999999999988776421 000 00000 000 0001122468888 567777777665
Q ss_pred ----------------eEEEEeCCCCCceeeec---CC-------CCEEEEEEecCCc---EEEEeC-CCcEEEEEccCC
Q psy11036 66 ----------------TVNVYDTRSPDPVMSVN---HG-------SPVESVLCLPSGG---IFVTGG-GLDVCIWDMLGG 115 (239)
Q Consensus 66 ----------------~v~vw~~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~-~~~i~~~d~~~~ 115 (239)
.|..+|.++++.+..+. |. .+.....+..+|+ .++.+. +|.+.++|.+ +
T Consensus 255 ~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~-t 333 (668)
T 1kv9_A 255 NREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT-N 333 (668)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT-T
T ss_pred ccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC-C
Confidence 49999999999887763 21 3333333444665 566666 7999999988 7
Q ss_pred CeEEEEEeccCC------------ce------------------------EEEEEcCCCCEEEEEecCCeEEEEEcccc-
Q psy11036 116 GKLLHKFTCHHK------------TV------------------------TSLCLASGGKRLISASLDHHAKIYEMTLK- 158 (239)
Q Consensus 116 ~~~~~~~~~~~~------------~i------------------------~~i~~~~~~~~l~~~~~d~~i~i~d~~~~- 158 (239)
++.+...+.... ++ ..++++|+...+.....+-.......+..
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGC
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccc
Confidence 777754432210 00 11456666555555433322111111000
Q ss_pred ----e--E---------e-eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 159 ----T--V---------S-SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 159 ----~--~---------~-~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
. + . .-...+.+..||..+ ++.+-....+ .+.....+...+.+++.++.|+.++.||.++++.
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCC-CcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 0 0 0 001125688899877 5555444432 2233334455688899999999999999999999
Q ss_pred eEEecCCC
Q psy11036 223 VHTLDYPS 230 (239)
Q Consensus 223 ~~~~~~~~ 230 (239)
+.++..+.
T Consensus 492 l~~~~~~~ 499 (668)
T 1kv9_A 492 LWQFEAQS 499 (668)
T ss_dssp EEEEECSS
T ss_pred heEecCCC
Confidence 99887543
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.92 E-value=2.2e-07 Score=70.62 Aligned_cols=175 Identities=14% Similarity=0.093 Sum_probs=111.3
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~ 85 (239)
++.|..+|.+ ++....+..+. ..+.++...+ ++. +..++.++.|..+|.. ++....+. ...
T Consensus 116 ~~~l~~~d~~-g~~~~~~~~~~--------------~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 116 DGHLYAINTD-GTEKWRFKTKK--------------AIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSS--------------CCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred CCEEEEEcCC-CCEEEEEcCCC--------------ceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 5677778876 66655555443 4455566665 444 5557778899999988 77665553 334
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeec
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTG 165 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 165 (239)
.+.++...+++..++.. +.+..+| . .++...........+.++...++|. +..++.++.+..+|..++.
T Consensus 178 ~~~~~~~d~~g~l~v~t--~~l~~~d-~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~------ 246 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS--DKVYAIN-P-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTE------ 246 (330)
T ss_dssp CCSCCEECTTCCEEEES--SSEEEEC-T-TSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCE------
T ss_pred ceeeeEEcCCCEEEEEe--CEEEEEC-C-CCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCCCE------
Confidence 55666777777766555 8888998 4 5666666665556678888887765 5556667777777654222
Q ss_pred ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 166 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 166 ~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+..+......+..+.+.+++ .|..++.+|.|..+|. +++.+..+.
T Consensus 247 ---------------~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 247 ---------------KWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp ---------------EEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred ---------------eEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE
Confidence 22222222223334555555 4566777888999985 677776665
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.86 E-value=3.4e-06 Score=65.90 Aligned_cols=162 Identities=8% Similarity=-0.054 Sum_probs=102.9
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--C-CcEEEEEccCCCeEE
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--G-LDVCIWDMLGGGKLL 119 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~-~~i~~~d~~~~~~~~ 119 (239)
....+++.+.++.++++-...+.|.+.++........+ ........++++|.+..|+.+. . +.|..+++. .....
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~ 238 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRR 238 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC-CCCcE
Confidence 45678888755666677667788999888754433333 2345678999999777666665 3 678888876 32222
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
......-.....|+++|++..|..+ ...+.|..+|+++.. ....+.........+++ .
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~--------------------~~~~~~~~~~~P~giav-~ 297 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH--------------------RKAVISQGLPHPFAITV-F 297 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS--------------------CEEEECSSCSSEEEEEE-E
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe--------------------eEEEEECCCCCceEEEE-E
Confidence 2223333456899999866655554 445678877776211 11111112334567777 4
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.++++-...+.|..++..+|+.+..+.
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 55666777778899999977777766665
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=5e-06 Score=64.02 Aligned_cols=162 Identities=8% Similarity=-0.040 Sum_probs=102.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--C-CcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--G-LDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~-~~i~~~d~~~~~~~ 118 (239)
.....+++.+.+++++++-...+.|.+.++........+ ........++++|.+..++.+. . +.|..+++. +..
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~ 193 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSG 193 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCS
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCC
Confidence 345688998756667677677789999998754433333 3345678999999766666555 4 678888876 222
Q ss_pred EEEE-eccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 119 LHKF-TCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 119 ~~~~-~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
...+ ...-.....++++|++..|..+. ..+.|..+|+++... ...+.........+++
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~--------------------~~~~~~~~~~P~giav 253 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--------------------KAVISQGLPHPFAITV 253 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--------------------EEEECSSCSSEEEEEE
T ss_pred cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce--------------------EEEEeCCCCCceEEEE
Confidence 2222 22334568999998766555544 456788888762111 1111112234566777
Q ss_pred ccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 197 ASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++.++++-...+.|..++..+|+....+.
T Consensus 254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 254 -FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 456666777778889988877777666665
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.83 E-value=1e-05 Score=59.14 Aligned_cols=185 Identities=8% Similarity=0.068 Sum_probs=119.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCe--
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGK-- 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~-- 117 (239)
..+..++++|+++.++++...++.|...|.. ++....+. .......+++.+++.++++.. ++.+.++++...+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 6799999999555566667888999999998 88777763 336788999999888766654 68899998874443
Q ss_pred EEEEEe------ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 118 LLHKFT------CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 118 ~~~~~~------~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
.+.... ..+.....++++|+++.|.++.+.....+|.+++. ....++.+.+.. .. .-..+...+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~-----~~~~~l~i~~~~---~~--~~~~~~~d~ 175 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGL-----LSSNELHISKDK---AL--QRQFTLDDV 175 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEEST-----TCSSCCEEEECH---HH--HHTCCSSCC
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccc-----ccCCceeeecch---hh--ccccccCCc
Confidence 223332 12345689999999987777777666666666510 000011111100 00 000122356
Q ss_pred EEEEEccC-CCeEEEEcCCceEEEEEccCCeeeEEecCCC----------CeeeeEecC
Q psy11036 192 TSLCLASG-GKRLISASLDHHAKIYEMVNFSPVHTLDYPS----------PVLSIDVSM 239 (239)
Q Consensus 192 ~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~----------~v~~~~~sp 239 (239)
.+++++|. +++++.....+.+.++|.. |+++..+.... ....|+|.|
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 88999994 5666777778899999974 66777666332 456666643
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=3.3e-06 Score=69.37 Aligned_cols=220 Identities=12% Similarity=-0.027 Sum_probs=127.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeecc---c-------e-------------eeccCCCC-CeEEEEEecCCCCEEEEe
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKV---P-------L-------------MLYSTPQD-YVRAGTVSPVSSDIVISG 61 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~-------~-------------~~~~~~~~-~v~~~~~~~~~~~~l~s~ 61 (239)
.++.|+.+|.++|+.+..+......... | . ..+..... ....+++.+ ....+..+
T Consensus 174 ~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~ 252 (571)
T 2ad6_A 174 VRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYG 252 (571)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEE
Confidence 3789999999999998877654311000 0 0 00000000 112356666 44455544
Q ss_pred eCC----------------CeEEEEeCCCCCceeeec---CC--------CCEEEEEEecCCc---EEEEeC-CCcEEEE
Q psy11036 62 SYD----------------KTVNVYDTRSPDPVMSVN---HG--------SPVESVLCLPSGG---IFVTGG-GLDVCIW 110 (239)
Q Consensus 62 ~~d----------------g~v~vw~~~~~~~~~~~~---~~--------~~v~~~~~~~~~~---~l~~~~-~~~i~~~ 110 (239)
..+ +.|..+|.++++.+..+. +. .++ -+...++|+ .++.+. +|.+.++
T Consensus 253 ~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~l 331 (571)
T 2ad6_A 253 SGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTL 331 (571)
T ss_dssp CCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEE
T ss_pred CCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEE
Confidence 421 369999999999877663 11 222 223334674 455666 7899999
Q ss_pred EccCCCeEEEEEeccC-------------Cce--------------------------EEEEEcCCCCEEEEEecCCeEE
Q psy11036 111 DMLGGGKLLHKFTCHH-------------KTV--------------------------TSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 111 d~~~~~~~~~~~~~~~-------------~~i--------------------------~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
|.. +++.+....... .++ ..++++|+...+.+...+....
T Consensus 332 D~~-tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 410 (571)
T 2ad6_A 332 NRE-NGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMD 410 (571)
T ss_dssp ETT-TCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEE
T ss_pred ECC-CCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhcccc
Confidence 988 777766554221 111 2357888888888877665544
Q ss_pred EEEcc-----cce-----Eeee--------ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEE
Q psy11036 152 IYEMT-----LKT-----VSSF--------TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213 (239)
Q Consensus 152 i~d~~-----~~~-----~~~~--------~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~ 213 (239)
++..+ +.. ...+ ...+.+..+|..+. +.+.++.. ...+....+...+..++.++.|+.|+
T Consensus 411 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG-~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~ 488 (571)
T 2ad6_A 411 WEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG-KAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLK 488 (571)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC-CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEE
T ss_pred ccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC-CEEEEecC-CCCccceeEEECCCEEEEEcCCCeEE
Confidence 44332 000 0000 12467888998864 44444432 22222222333466777799999999
Q ss_pred EEEccCCeeeEEecCCC
Q psy11036 214 IYEMVNFSPVHTLDYPS 230 (239)
Q Consensus 214 iwd~~~~~~~~~~~~~~ 230 (239)
.||.++|+.+.+++...
T Consensus 489 a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 489 ALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEETTTCCEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCC
Confidence 99999999999988544
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.77 E-value=7.5e-07 Score=67.61 Aligned_cols=169 Identities=11% Similarity=0.060 Sum_probs=109.8
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~ 85 (239)
++.|..+|.. ++....+.... ..+.++...+ ++.+.+.. +.|..+| .+++...... ...
T Consensus 156 ~~~l~~~d~~-g~~~~~~~~~~--------------~~~~~~~~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~ 215 (330)
T 3hxj_A 156 DNYLYAINPD-GTEKWRFKTND--------------AITSAASIGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGYW 215 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSS--------------CCCSCCEECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSSC
T ss_pred CCEEEEECCC-CCEeEEEecCC--------------CceeeeEEcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCCc
Confidence 4778888887 77666665544 5566777766 56655544 7799999 7777666553 345
Q ss_pred CEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeec
Q psy11036 86 PVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTG 165 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 165 (239)
.+.++...+++...+...++.+..+|. .++.+..+......+..+...+++ .|..++.++.+..+|..
T Consensus 216 ~~~~~~~~~~g~l~v~t~~~gl~~~~~--~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~~--------- 283 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSLDGHLYAINP--DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINPD--------- 283 (330)
T ss_dssp CCSCCEECTTSCEEEEETTTEEEEECT--TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECTT---------
T ss_pred ceeceEECCCCeEEEEcCCCeEEEECC--CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECCC---------
Confidence 677888888887777766788888875 455555555444444555565555 56677778888888754
Q ss_pred ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCC
Q psy11036 166 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220 (239)
Q Consensus 166 ~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~ 220 (239)
++....+......+.++...++|+ |..++.+|.+++...+..
T Consensus 284 ------------g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 284 ------------GTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp ------------SCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred ------------CcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 222223333344566667767776 455888999998876543
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.77 E-value=2.6e-05 Score=60.01 Aligned_cols=156 Identities=7% Similarity=-0.091 Sum_probs=96.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~ 119 (239)
..+..++|++.++.++++-...+.|..+++........+. .......+++.+.+..|+.+. .+.|.+.++. .....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRK 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceE
Confidence 5578999998556666666677899999988665444332 234557889998665555544 5889999987 33323
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEe-cC-CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISAS-LD-HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
..+.........++++|.+..|.... .. +.|..+++++.....+ ....-.....++++
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~--------------------~~~~~~~PnGla~d 211 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII--------------------ADTHLFWPNGLTID 211 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES--------------------CCSSCSCEEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE--------------------EECCCCCcceEEEe
Confidence 33333345678999999665555443 33 6777777762211111 01112345678888
Q ss_pred cCCCeE-EEEcCCceEEEEEccC
Q psy11036 198 SGGKRL-ISASLDHHAKIYEMVN 219 (239)
Q Consensus 198 ~~~~~l-~s~s~d~~i~iwd~~~ 219 (239)
|++..| ++-+..+.|..+++..
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCEEEEEECCCCEEEEEeCCC
Confidence 755444 4445567788888754
No 253
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.76 E-value=2.4e-05 Score=59.34 Aligned_cols=204 Identities=12% Similarity=-0.043 Sum_probs=122.0
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC----CCceeeec
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS----PDPVMSVN 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~----~~~~~~~~ 82 (239)
...|+..|+++.+....+..- ..+.+++|++.++.++++-..++.|..+++.. ......+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~---------------~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNL---------------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSC---------------SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred CCeEEEEECCCcceEehhcCC---------------CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 356888888877655544433 56789999985556666666778999999876 22222232
Q ss_pred -CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecC--CeEEEEEccc
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD--HHAKIYEMTL 157 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d--~~i~i~d~~~ 157 (239)
.......+++.+.+..++.+. .+.|.++++. .......+.........++++|.+..|..+... +.|...++++
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC-CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 224567899987655555543 5889999986 333333333334567899999966655554443 6888888773
Q ss_pred ceEeee------------------------ecceeEEEEEccCCCEE-EEEEecccCcEEEEEEccCCCeEEEEcCCceE
Q psy11036 158 KTVSSF------------------------TGGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 158 ~~~~~~------------------------~~~~~i~~~d~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i 212 (239)
.....+ .+...|..+|....... +......-.....+++. .+.++++-...+.|
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 231 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence 322221 11122455555432211 11111112335677774 46666777778899
Q ss_pred EEEEccCCeeeEEec
Q psy11036 213 KIYEMVNFSPVHTLD 227 (239)
Q Consensus 213 ~iwd~~~~~~~~~~~ 227 (239)
..++..+++.+..+.
T Consensus 232 ~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 232 FSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEETTTCCCCEEEE
T ss_pred EEEeCCCCcceEEEe
Confidence 999988887666654
No 254
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.76 E-value=9.4e-07 Score=74.20 Aligned_cols=209 Identities=14% Similarity=0.141 Sum_probs=116.3
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCe-EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYV-RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
.++.|+.+|..+|+.+..+............+. ..+ ..+++ .+..++.++.|+.|..+|.++++.+..+...
T Consensus 78 ~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~----~~~~~~~~~---~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~ 150 (689)
T 1yiq_A 78 PFSVVYALDARDGRLIWKYDPQSDRHRAGEACC----DAVNRGVAV---WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTR 150 (689)
T ss_dssp GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTT----CSCCCCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred CCCeEEEEECCCCceeEEEcCCCCccccccccc----cCCCCccEE---ECCEEEEEccCCEEEEEECCCCCEeeeecCc
Confidence 357788899999999888765431000000000 000 11223 2457788889999999999999988766321
Q ss_pred ---CCEEEEEEec---CCcEEEEeC------CCcEEEEEccCCCeEEEEEeccC--------------------------
Q psy11036 85 ---SPVESVLCLP---SGGIFVTGG------GLDVCIWDMLGGGKLLHKFTCHH-------------------------- 126 (239)
Q Consensus 85 ---~~v~~~~~~~---~~~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~-------------------------- 126 (239)
.....+..+| ++..++..+ ++.|..||.+ +++.+-++....
T Consensus 151 ~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~ 229 (689)
T 1yiq_A 151 ADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE-TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE 229 (689)
T ss_dssp SCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred CCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC-CCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence 1111111112 454444322 4789999998 777766654210
Q ss_pred -----CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecc----eeEEEEEccCCCEEEEEEec--cc-------
Q psy11036 127 -----KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG----LDVCIWDMLGGGKLLHKFTC--HH------- 188 (239)
Q Consensus 127 -----~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~--h~------- 188 (239)
.....++++|+...++.+..++.. |....... ..++ ..+..+|..+ ++.+-.++. |.
T Consensus 230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~--w~~~~~~~--~~gd~~y~~~v~AlD~~T-G~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 230 QGGGGTAWDSFAYDPELNLLYIGVGNGSL--WDPKWRSQ--AKGDNLFLSSIVAVNADT-GEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHHT--TCSCCTTTTEEEEEETTT-CCEEEEEESSTTCCSCCCCC
T ss_pred cCCCCccccceeEcCCCCEEEEeCCCCCc--cccCCCCC--CCCCceeeeeEEEEEccC-CceeEeeecCCcccccccCC
Confidence 011257788888888888777641 22110000 0000 1245555544 333433332 21
Q ss_pred CcEEEEEEccCCC---eEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 189 KTVTSLCLASGGK---RLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 189 ~~v~~~~~s~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+........+|+ .++.++.+|.++++|.++|+++...+
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 1222222223565 78899999999999999999986655
No 255
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=7.8e-07 Score=74.54 Aligned_cols=209 Identities=11% Similarity=0.081 Sum_probs=119.3
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC--
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG-- 84 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-- 84 (239)
++.|+-+|..+|+.+..+.........+..+... .-..+++ .+..++.++.|+.|..+|..+++.+..+...
T Consensus 86 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~---~~~~~a~---~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~ 159 (677)
T 1kb0_A 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDV---VNRGVAL---WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEG 159 (677)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCS---CCCCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEETTTT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccC---CCCCceE---ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcC
Confidence 5778889999999888776543100000000000 0112333 2457777888999999999999988777422
Q ss_pred ----CCEEEEEEecCCcEEEEeC------CCcEEEEEccCCCeEEEEEeccCCc--------------------------
Q psy11036 85 ----SPVESVLCLPSGGIFVTGG------GLDVCIWDMLGGGKLLHKFTCHHKT-------------------------- 128 (239)
Q Consensus 85 ----~~v~~~~~~~~~~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~-------------------------- 128 (239)
..+...-...++..++... ++.|..+|.+ +++.+-++......
T Consensus 160 ~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~ 238 (677)
T 1kb0_A 160 QKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAE-TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEA 238 (677)
T ss_dssp CCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHH
T ss_pred cCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECC-CCcEEEEeccCCCCccccccccccccccccccccCceeEe
Confidence 1221111111344433332 4789999998 77777666532211
Q ss_pred ------eEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecc----eeEEEEEccCCCEEEEEEec--cc-------C
Q psy11036 129 ------VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG----LDVCIWDMLGGGKLLHKFTC--HH-------K 189 (239)
Q Consensus 129 ------i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~--h~-------~ 189 (239)
...++++|++..++.+..++.. |....+. ...|+ ..+..+|..+ ++.+-.++. |. .
T Consensus 239 ~~g~~~w~~~~~d~~~~~vy~~~~~~~~--w~~~~~~--~~~gd~~~~~sv~AlD~~T-G~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 239 GGGGTMWDSMTFDAELNTMYVGTGNGSP--WSHKVRS--PKGGDNLYLASIVALDPDT-GKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHS--TTCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCCCCCS
T ss_pred CCCcccccceeEcCCCCEEEEECCCCcc--ccCCCCC--ccCCCCeeeEEEEEEECCC-CCEEEEEecCCCcccccccCC
Confidence 1356788888888887766532 2221000 00000 1244555544 333333332 21 1
Q ss_pred cEEEEEEccCC---CeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 190 TVTSLCLASGG---KRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 190 ~v~~~~~s~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
...-+....+| +.++.++.+|.++++|..+|+++..+.
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 22223334477 688999999999999999999988776
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=2.9e-05 Score=60.62 Aligned_cols=156 Identities=7% Similarity=-0.083 Sum_probs=96.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~ 119 (239)
..+..++|++.++.++++-...+.|..+++........+. .......+++.+.+..|+.+. .+.|.+.++. .....
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~~~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRK 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCSCE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCceE
Confidence 5678999998556666666677899999988665443332 233456788998666555554 5788888886 33333
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEec-C-CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISASL-D-HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
..+.........+++.|.+..|..... . +.|..+++++.....+ ....-.....|+++
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~--------------------~~~~~~~PnGlavd 254 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII--------------------ADTHLFWPNGLTID 254 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE--------------------ECSSCSCEEEEEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE--------------------EECCCCCeeeEEEe
Confidence 333333456789999987665555443 3 5677777662211111 11112345678888
Q ss_pred cCCCeE-EEEcCCceEEEEEccC
Q psy11036 198 SGGKRL-ISASLDHHAKIYEMVN 219 (239)
Q Consensus 198 ~~~~~l-~s~s~d~~i~iwd~~~ 219 (239)
|++..| ++-+..+.|..+|+..
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 255 YAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp GGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCEEEEEECCCCEEEEEeCCC
Confidence 754444 4445567788887753
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.65 E-value=2.5e-05 Score=64.35 Aligned_cols=140 Identities=16% Similarity=0.061 Sum_probs=83.9
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEE-EEEecCCCCEEEEee------CCCeEEEEeCCCCCce
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRA-GTVSPVSSDIVISGS------YDKTVNVYDTRSPDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~------~dg~v~vw~~~~~~~~ 78 (239)
.|+.|+.+|.++|+.+......... .. ..+.+ ..+. ++ .++.++ .++.|+.+|.++++.+
T Consensus 129 ~dg~l~AlDa~TG~~~W~~~~~~~~---------~~-~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 129 LDGNVAALNAETGETVWKVENSDIK---------VG-STLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGG---------GT-CBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEEEeecCCCCC---------cc-ceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEE
Confidence 4678888999999988766543200 00 01111 1111 33 444444 3799999999999987
Q ss_pred eeecCCCCE---------------------------------------EEEEEecCCcEEEEeC-C--------------
Q psy11036 79 MSVNHGSPV---------------------------------------ESVLCLPSGGIFVTGG-G-------------- 104 (239)
Q Consensus 79 ~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~-~-------------- 104 (239)
..+....+. ..+++.++...++.+. +
T Consensus 196 W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~ 275 (599)
T 1w6s_A 196 WRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNK 275 (599)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCcc
Confidence 766322111 1345667666776665 3
Q ss_pred --CcEEEEEccCCCeEEEEEeccC----------CceEEEEEc-CCC---CEEEEEecCCeEEEEEcc-cceE
Q psy11036 105 --LDVCIWDMLGGGKLLHKFTCHH----------KTVTSLCLA-SGG---KRLISASLDHHAKIYEMT-LKTV 160 (239)
Q Consensus 105 --~~i~~~d~~~~~~~~~~~~~~~----------~~i~~i~~~-~~~---~~l~~~~~d~~i~i~d~~-~~~~ 160 (239)
+.|..+|.+ +++.+-.++... .++. +... .+| ..++.++.+|.+.++|.+ ++.+
T Consensus 276 y~~sv~Ald~~-TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 276 WTMTIFGRDAD-TGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp TSSEEEEEETT-TCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceEEEEeCC-CCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 268889998 777766655321 1221 2222 467 467778899999999876 4443
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.62 E-value=6.5e-05 Score=56.58 Aligned_cols=191 Identities=9% Similarity=0.046 Sum_probs=113.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC-CC--cEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GL--DVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~--~i~~~d~~~~~~~~ 119 (239)
.....++|++ +++++++-..++.|..+|... +....+.....+..+++.++++++++.. .+ .|..++.. .++..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVE 108 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEE
Confidence 4577999999 788877777889999999765 3444444556789999999999766553 22 36666765 44433
Q ss_pred EEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccc--eEe-------------ee-----------------ecc
Q psy11036 120 HKFT-CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK--TVS-------------SF-----------------TGG 166 (239)
Q Consensus 120 ~~~~-~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~-------------~~-----------------~~~ 166 (239)
.... ........++..+++..+++-..++.|..+|.... .+. .+ ++.
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEK 188 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTT
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCC
Confidence 2222 11223345555555544554445788888886521 111 00 112
Q ss_pred eeEEEEEccCCCEE--EEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee--EEecCC-CCeeeeEec
Q psy11036 167 LDVCIWDMLGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV--HTLDYP-SPVLSIDVS 238 (239)
Q Consensus 167 ~~i~~~d~~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~-~~v~~~~~s 238 (239)
..|..++....+.. ...+.. ......+++.++|+++++....+.|.+++.. ++.. ..+..+ ....+++|.
T Consensus 189 ~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp TEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred CEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 23555665431110 011110 1234567899999887777778899999975 6553 334433 567888875
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.61 E-value=2.4e-05 Score=64.34 Aligned_cols=164 Identities=12% Similarity=0.035 Sum_probs=96.5
Q ss_pred CeEEEEeCCCCCceeeec---CC--------CCEEEEEEe-cCCc---EEEEeC-CCcEEEEEccCCCeEEEEEeccC--
Q psy11036 65 KTVNVYDTRSPDPVMSVN---HG--------SPVESVLCL-PSGG---IFVTGG-GLDVCIWDMLGGGKLLHKFTCHH-- 126 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~---~~--------~~v~~~~~~-~~~~---~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-- 126 (239)
+.|..+|..+++.+..+. |. .++. +... .+|+ .++.++ +|.+.++|.+ +++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~-tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS-NGKLQNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT-TCCEEEEEESSSCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC-CCCEecccccccCc
Confidence 689999999999887763 21 1221 2222 4664 566666 7999999998 777776554321
Q ss_pred -----------Cce--------------------------------EEEEEcCCCCEEEEEecCCeEEEEEcc-----cc
Q psy11036 127 -----------KTV--------------------------------TSLCLASGGKRLISASLDHHAKIYEMT-----LK 158 (239)
Q Consensus 127 -----------~~i--------------------------------~~i~~~~~~~~l~~~~~d~~i~i~d~~-----~~ 158 (239)
.++ ..++++|+...+++...+-...++..+ +.
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 000 124566665566665554444333321 00
Q ss_pred -----eEeee----ecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecCC
Q psy11036 159 -----TVSSF----TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP 229 (239)
Q Consensus 159 -----~~~~~----~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 229 (239)
.+... ...+.+..||+.+.. .+-+.... .++..-.....+.+++.++.|+.++.||.++|+.+.+++.+
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~-~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGK-VVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCC-EEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCC-EEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 00000 124568889988744 33333322 12221122234677888999999999999999999998855
Q ss_pred CCe
Q psy11036 230 SPV 232 (239)
Q Consensus 230 ~~v 232 (239)
+.+
T Consensus 527 ~g~ 529 (582)
T 1flg_A 527 SGI 529 (582)
T ss_dssp SCC
T ss_pred CCc
Confidence 443
No 260
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.58 E-value=9.5e-05 Score=56.10 Aligned_cols=177 Identities=9% Similarity=-0.046 Sum_probs=106.2
Q ss_pred CCEEEEeeCCCcce--eeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-ee-c
Q psy11036 7 ILIVALWDIPSEAQ--VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-SV-N 82 (239)
Q Consensus 7 dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~-~ 82 (239)
...|+..+++.... ...+..- ..+..++|++.++.++.+-...+.|..+++....... .+ .
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~---------------~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~ 76 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGL---------------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS 76 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEE---------------EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEecCC---------------CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC
Confidence 45788888876531 1122221 4467999998556677776778899999987654222 22 2
Q ss_pred CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcccc
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMTLK 158 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~~~ 158 (239)
.-.....+++.+.+..|+.+. .+.|.++++. .................+++.|.+..|..... .+.|...++++.
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 155 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 155 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECC-CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC
Confidence 234567889998655555554 5889999987 33222223334456789999987666655542 467777776622
Q ss_pred eEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeE-EEEcCCceEEEEEccC
Q psy11036 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMVN 219 (239)
Q Consensus 159 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~i~iwd~~~ 219 (239)
....+ ....-.....++++|++..| ++-+..+.|..+|+..
T Consensus 156 ~~~~~--------------------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 156 SRFII--------------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp SCEEE--------------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CeEEE--------------------EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 11111 11112345678888755444 4445567788888753
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=0.00013 Score=57.25 Aligned_cols=183 Identities=11% Similarity=-0.058 Sum_probs=109.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----Cceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----DPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~ 115 (239)
..+..++|++.++.++++-...+.|+.+++... .....+. .......+++.+.+..|+.+. .+.|.+.+++ .
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g 190 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-G 190 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-T
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-C
Confidence 678899999855556666667788999998752 2223332 445678999998555555554 5889999987 4
Q ss_pred CeEEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcccceEeee------------------------ecceeE
Q psy11036 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMTLKTVSSF------------------------TGGLDV 169 (239)
Q Consensus 116 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~------------------------~~~~~i 169 (239)
......+.........|++.|.+..|..... .+.|...++++.....+ .+...|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 4333334434455789999997666555442 36788888773222111 111224
Q ss_pred EEEEccCCCEEEEEE-ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 170 CIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 170 ~~~d~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
..+|+.......... ...-.....+++ ..+.++.+-...+.|..++..+|+.+..+.
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 444443322111111 111233456666 344566666777889999988887776665
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.57 E-value=0.0001 Score=55.98 Aligned_cols=162 Identities=9% Similarity=-0.054 Sum_probs=101.8
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeEE
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKLL 119 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~~ 119 (239)
....+++.+.+++++++-...+.|.+.++........+ ........+++.|.+..++.+. .+.|...++. .....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRF 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeE
Confidence 45678888756667777667789999998754333333 3445678999999766555554 3678888876 22222
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 120 HKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
......-.....+++++++..|..+. ..+.|..+|+++... +.+ ..+.......+++.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------------~~~--~~~~~~~P~glav~- 217 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR------------------QAV--VKGSLPHPFALTLF- 217 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------------EEE--ECSCCSCEEEEEEE-
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce------------------EEE--ecCCCCCceEEEEe-
Confidence 22222334568999999766655554 467788888772111 111 11122345566764
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.++.+-...+.|..++..+|+....+.
T Consensus 218 ~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 218 EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 34556666678899999988887766665
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.50 E-value=7.2e-05 Score=56.72 Aligned_cols=167 Identities=9% Similarity=0.020 Sum_probs=92.6
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-c-------------------CCCCEEEEEEec-CCcEEEEe
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-N-------------------HGSPVESVLCLP-SGGIFVTG 102 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~-------------------~~~~v~~~~~~~-~~~~l~~~ 102 (239)
...++++.+ +++++.++..++.|..|+..+++..... . ....+..+++.+ ++.++++.
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 355788998 6787888888899999998765432211 0 013578999998 67666655
Q ss_pred CCCcEEEEEccCCCeEEEEEec-----cCCceEEEEEcC-CCCEEEEEecCCeEEEEEccc--ceEeeeecceeEEEEEc
Q psy11036 103 GGLDVCIWDMLGGGKLLHKFTC-----HHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTL--KTVSSFTGGLDVCIWDM 174 (239)
Q Consensus 103 ~~~~i~~~d~~~~~~~~~~~~~-----~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~i~~~d~ 174 (239)
..+.+..+|.. .+. +..+.. .......+++.+ +|+..++-.... +..+. ..+......+.+..+|.
T Consensus 99 ~~~~i~~~d~~-~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~----~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 99 CYYHLSVVGSE-GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL----YDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp TTTEEEEECTT-CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS----CCTTCHHHHHHHTCCCEEEEEEET
T ss_pred CCCCEEEEeCC-CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCccc----ccccccceehcccCCCceEEEEeC
Confidence 55558888865 332 222221 113467888888 887655532210 00000 00000001122334443
Q ss_pred cCCCEEEEEEecccCcEEEEEEccCCCeEEEE-cCCceEEEEEccC
Q psy11036 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMVN 219 (239)
Q Consensus 175 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~d~~i~iwd~~~ 219 (239)
.+ ++....... ......++++|++++|..+ +..+.|.+|++..
T Consensus 173 ~~-~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 173 ST-KETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TT-TEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CC-CEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 32 221111111 1234578999999865544 6678999999874
No 264
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.50 E-value=0.00015 Score=54.49 Aligned_cols=184 Identities=11% Similarity=0.153 Sum_probs=125.1
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccC
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH 126 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~ 126 (239)
+.-.+| ..+.++.-. ..++.++|+++.+.+..+...++|.--.|-. .+.|+...+..|.-|++.....+.+.+..|.
T Consensus 71 sAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis-~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 71 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS-SSEEEEEESSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC-CCeEEEEcCCcEEEEcccCCCCCceeeecch
Confidence 455688 667766554 6889999999999888887778888777764 5677777788999999986667777776554
Q ss_pred ----CceEEEEEcCCCCEEEEEec-------CCeEEEEEcccceEeeeec----------------------------ce
Q psy11036 127 ----KTVTSLCLASGGKRLISASL-------DHHAKIYEMTLKTVSSFTG----------------------------GL 167 (239)
Q Consensus 127 ----~~i~~i~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~----------------------------~~ 167 (239)
..|..-..+++.++++..+- .|.+.+|..+.+..+.+.| +.
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 36777788889998776553 3778899887333222211 13
Q ss_pred eEEEEEccCC--CE------EEEEEec---ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec-CCCCee
Q psy11036 168 DVCIWDMLGG--GK------LLHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL 233 (239)
Q Consensus 168 ~i~~~d~~~~--~~------~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~v~ 233 (239)
.+.+.++... +. .+..+-. ...-..++..|+....+..-+.-|.|.+||++++.++..-. ...+|.
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 4666665332 11 1111111 12234567777777778888889999999999999988766 334443
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.47 E-value=0.00015 Score=53.01 Aligned_cols=184 Identities=11% Similarity=0.067 Sum_probs=107.8
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---eee-
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV---MSV- 81 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~---~~~- 81 (239)
.++.|...|.. ++.++.+..... .....+++.+ ++.++++.-.++.+.++++.....+ ...
T Consensus 47 ~~~~I~~ld~~-g~v~~~i~l~g~-------------~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~ 111 (255)
T 3qqz_A 47 KPAAIVEMTTN-GDLIRTIPLDFV-------------KDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKKIK 111 (255)
T ss_dssp TTEEEEEEETT-CCEEEEEECSSC-------------SSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEEEE
T ss_pred CCCeEEEEeCC-CCEEEEEecCCC-------------CChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeeeec
Confidence 35677777876 777776643210 4577888887 6666666556788999987655432 111
Q ss_pred ------cCCCCEEEEEEecCCcEEEEeC-CCcEEEEEccC--CCeEEEEEe-------ccCCceEEEEEcCCC-CEEEEE
Q psy11036 82 ------NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG--GGKLLHKFT-------CHHKTVTSLCLASGG-KRLISA 144 (239)
Q Consensus 82 ------~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~--~~~~~~~~~-------~~~~~i~~i~~~~~~-~~l~~~ 144 (239)
........++|+|.+..|.++. .....+|.... ....+..+. .+...+.+++++|.. ++++..
T Consensus 112 ~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 112 IPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp CCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE
T ss_pred cccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEE
Confidence 1234568999999987777776 34445555431 111122221 123457899999955 455566
Q ss_pred ecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEc
Q psy11036 145 SLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217 (239)
Q Consensus 145 ~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~ 217 (239)
.....+.++|.+++.+..+ .+..+..-+ ..--..-..|+|.++|++.++ ++...++.|.-
T Consensus 192 ~~s~~L~~~d~~g~~~~~~---------~L~~g~~~l---~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 192 HESRALQEVTLVGEVIGEM---------SLTKGSRGL---SHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TTTTEEEEECTTCCEEEEE---------ECSTTGGGC---SSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CCCCeEEEEcCCCCEEEEE---------EcCCccCCc---ccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 6677888888773322222 211100000 000124578999999985555 67777777654
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.46 E-value=2.4e-05 Score=65.54 Aligned_cols=207 Identities=16% Similarity=0.123 Sum_probs=114.4
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCe-EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCC
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYV-RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHG 84 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 84 (239)
.++.|+-+|..+|+.+..+............+. ..+ ..+++. +..++.++.|+.|..+|..+++.+..+...
T Consensus 74 ~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~W~~~~~ 146 (668)
T 1kv9_A 74 SWSRVIAVDAASGKELWRYDPEVAKVKARTSCC----DAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAIWSQQTT 146 (668)
T ss_dssp GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTT----CSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCChhceEECCCCCccccccccc----cCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEeeeeccC
Confidence 357788899999998887765431000000000 000 122332 356777888999999999999988766321
Q ss_pred -----CCEEE-EEEecCCcEEEEeC-------CCcEEEEEccCCCeEEEEEeccC-------------------------
Q psy11036 85 -----SPVES-VLCLPSGGIFVTGG-------GLDVCIWDMLGGGKLLHKFTCHH------------------------- 126 (239)
Q Consensus 85 -----~~v~~-~~~~~~~~~l~~~~-------~~~i~~~d~~~~~~~~~~~~~~~------------------------- 126 (239)
..+.. ... .++ .++++. ++.|..+|.+ +++.+-++....
T Consensus 147 ~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 147 DPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDAD-TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp CTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred CCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECC-CCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 11111 011 134 444443 3789999998 777776664210
Q ss_pred ------CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeec----ceeEEEEEccCCCEEEEEEec--cc------
Q psy11036 127 ------KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTG----GLDVCIWDMLGGGKLLHKFTC--HH------ 188 (239)
Q Consensus 127 ------~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~i~~~d~~~~~~~~~~~~~--h~------ 188 (239)
.....+++.|+...++.++.++.. |....... ..+ ...|..+|..+ ++.+-.++. |.
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~--w~~~~~~~--~~gd~l~~~~v~AlD~~t-G~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSP--WNREVRSP--GGGDNLYLSSILAIRPDT-GKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEES--SCHHHHST--TCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCCCC
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCc--cccCCCCC--CCCCceeeeeEEEEcCCC-CceeeEeecCCCccccccC
Confidence 011236778877788777766541 21110000 000 01244445444 334333332 21
Q ss_pred -CcEEEEEEccCCC---eEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 189 -KTVTSLCLASGGK---RLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 189 -~~v~~~~~s~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.....+..+|+ .++.++.+|.++++|..+|+++...+
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 2222223334665 68889999999999999999986554
No 267
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=0.00043 Score=58.93 Aligned_cols=165 Identities=15% Similarity=0.036 Sum_probs=103.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC--C-CcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG--G-LDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~-~~i~~~d~~~~~~~ 118 (239)
.....|++.+.+++++++-...+.|.+.++........+ ........|+++|.+..|+.+. . +.|...++. ....
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~ 549 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDI 549 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CCce
Confidence 456689999855677777777889999998754433333 3445688999999766666554 3 678888886 3333
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
...+...-.....|++.+.+..|..+. ..+.|..+++++.....+ ..-...-.....|++.
T Consensus 550 ~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v------------------~~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 550 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI------------------LEDEKRLAHPFSLAVF 611 (791)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE------------------EECTTTTSSEEEEEEE
T ss_pred EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE------------------ecCCCccCCCCEEEEe
Confidence 333333335678999998766665554 456777777762211111 1001111234466664
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.++++-...+.|...+..+|+.+..+.
T Consensus 612 -~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 612 -EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp -TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred -CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 33555666677889888888887666654
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=0.00024 Score=53.84 Aligned_cols=162 Identities=10% Similarity=-0.004 Sum_probs=97.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-----CCCCEEEEEEec-CCcEEEEeCC------------
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-----HGSPVESVLCLP-SGGIFVTGGG------------ 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~------------ 104 (239)
..+..+++.+.++ .|+.+...+.+..+|..+++...... .......+++.+ +|.+.++...
T Consensus 80 ~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNN-QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTT-EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCC-cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 3578899987334 44445444558888876553221111 123478899999 9987776532
Q ss_pred ------CcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEEcccceEeeeecceeEEEEEccCC
Q psy11036 105 ------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177 (239)
Q Consensus 105 ------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~ 177 (239)
+.|..+|.. .++...... .......++++|+++.|..+ ...+.|..|++.+... + .
T Consensus 159 ~~~~~~g~v~~~d~~-~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~----~-----------~ 221 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPS-TKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK----G-----------T 221 (322)
T ss_dssp HHTCCCEEEEEEETT-TTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT----T-----------C
T ss_pred cccCCCceEEEEeCC-CCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC----C-----------c
Confidence 567888875 344322222 22345679999999866555 4568898888772110 0 0
Q ss_pred CEEEEEEecccCcEEEEEEccCCCeEEEEcC----------CceEEEEEccCCeeeEEec
Q psy11036 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASL----------DHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 178 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.... ..+ ...+++.++|++.++... .+.|..+|. .++.+..+.
T Consensus 222 ~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~ 276 (322)
T 2fp8_A 222 AEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIP 276 (322)
T ss_dssp EEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEE
T ss_pred cceEEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEE
Confidence 111111 122 667889999887666544 466788876 477777665
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.41 E-value=4.1e-05 Score=57.72 Aligned_cols=162 Identities=10% Similarity=0.071 Sum_probs=105.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-ecC-------CCCEEEEEE---ecCCcEEEEeC--------
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNH-------GSPVESVLC---LPSGGIFVTGG-------- 103 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~l~~~~-------- 103 (239)
....+++|++.++.++++.-..++|..|+...+..... +.. ...+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 44558899984455555555899999999875543332 222 113579999 68888877533
Q ss_pred ------CCcEEEEEccC--CCeEEEEEe--cc-----------CCceEEEEEcCCCCEEEEEecC-CeEEEEEcccceEe
Q psy11036 104 ------GLDVCIWDMLG--GGKLLHKFT--CH-----------HKTVTSLCLASGGKRLISASLD-HHAKIYEMTLKTVS 161 (239)
Q Consensus 104 ------~~~i~~~d~~~--~~~~~~~~~--~~-----------~~~i~~i~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~ 161 (239)
+..+..||+.. +++.+.... .. ......++..++|+..++++.. +.|...+.+++.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-- 170 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-- 170 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC--
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE--
Confidence 35688899860 133333222 11 1247899999999999999888 887777666221
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+..|..... ........+.|+++|+|+.|+....+|.+..+|+.+
T Consensus 171 -------~~~~~~~~~------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 -------VSTFAWESG------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -------EEEEEECCC------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred -------EeeeeecCC------CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 222322110 011123466899999999888887799999999874
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.38 E-value=0.00018 Score=59.17 Aligned_cols=143 Identities=11% Similarity=0.002 Sum_probs=85.5
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEE-EEEecCCCCEEEEeeC------CCeEEEEeCCCCCce
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRA-GTVSPVSSDIVISGSY------DKTVNVYDTRSPDPV 78 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~------dg~v~vw~~~~~~~~ 78 (239)
.++.|+.+|..+|+.+..+........ ..+.+ .... ++ .++.++. ++.|..+|.++++.+
T Consensus 123 ~dg~l~alD~~tG~~~W~~~~~~~~~~----------~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 123 ANGHLLALDAKTGKINWEVEVCDPKVG----------STLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGT----------CBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEEEEecCCCCCcc----------ceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 468899999999998877654320000 01111 1111 34 4444443 799999999999987
Q ss_pred eeecCCCCE---------------------------------------EEEEEecCCcEEEEeC-C--------------
Q psy11036 79 MSVNHGSPV---------------------------------------ESVLCLPSGGIFVTGG-G-------------- 104 (239)
Q Consensus 79 ~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~-~-------------- 104 (239)
..+....+. ..+++.++...++.+. +
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 766322111 1356677666666554 2
Q ss_pred --CcEEEEEccCCCeEEEEEecc----------CCceEEEEEcCCCC---EEEEEecCCeEEEEEcc-cceEeee
Q psy11036 105 --LDVCIWDMLGGGKLLHKFTCH----------HKTVTSLCLASGGK---RLISASLDHHAKIYEMT-LKTVSSF 163 (239)
Q Consensus 105 --~~i~~~d~~~~~~~~~~~~~~----------~~~i~~i~~~~~~~---~l~~~~~d~~i~i~d~~-~~~~~~~ 163 (239)
+.|..+|.+ +++.+-.++.. ..++. +...++|+ .++.++.+|.+.++|.+ ++.+...
T Consensus 270 y~~~v~Ald~~-tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 270 WTMTIWGRDLD-TGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TTTEEEEEETT-TCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eEEEEEEEecC-CCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 248889998 67776666532 12221 22234674 57778889999999987 6555443
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=8.2e-05 Score=58.91 Aligned_cols=153 Identities=10% Similarity=0.016 Sum_probs=94.8
Q ss_pred CeEEEEEec-CCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CC----cEEEEEccCCC
Q psy11036 44 YVRAGTVSP-VSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GL----DVCIWDMLGGG 116 (239)
Q Consensus 44 ~v~~~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~----~i~~~d~~~~~ 116 (239)
....++++| .++.++++ ...+.|+.+|+..++.............++++++++.|+++. ++ .+..++.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLV-GEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEE-EBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEE-eCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 456889997 24554444 444889999988765444445556788999999999666554 22 24444443222
Q ss_pred eEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-cccCcEEEE
Q psy11036 117 KLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSL 194 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~ 194 (239)
.....+.. ......++++| ++..+++-..++.|..++..+ ........ +.......+
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~--------------------~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT--------------------QETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT--------------------TEEEEEEECSSSSCCEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC--------------------CcEEEEEEcCCCCcceeE
Confidence 21123322 23456788999 666666666678888888762 11111111 112346789
Q ss_pred EEccCCCe-EEEEcCCceEEEEEcc
Q psy11036 195 CLASGGKR-LISASLDHHAKIYEMV 218 (239)
Q Consensus 195 ~~s~~~~~-l~s~s~d~~i~iwd~~ 218 (239)
+|+|+|++ +++-...+.|..++..
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCC
Confidence 99999994 5555678899998875
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.36 E-value=0.00086 Score=57.12 Aligned_cols=113 Identities=10% Similarity=-0.095 Sum_probs=74.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----Cceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP----DPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~ 115 (239)
..+..++|.+.++.++++-...+.|+.+++... .....+. .......|++.+.+..|+.+. .+.|.+.++. .
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G 502 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-G 502 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-S
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-C
Confidence 567899999855666667667788999998753 2223332 345667899998887666665 5889999997 3
Q ss_pred CeEEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcc
Q psy11036 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMT 156 (239)
Q Consensus 116 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~ 156 (239)
......+.........|++.|.+..|..... .+.|...++.
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 3333333334456789999997666555543 2678777777
No 273
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.33 E-value=0.00055 Score=53.50 Aligned_cols=178 Identities=12% Similarity=0.148 Sum_probs=121.6
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccC
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH 126 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~ 126 (239)
+.-.+| ..+.++.-. ..++.++|+++.+.+..+....+|.--.|-. .+.|+...+..|.-|++.....+.+.+..|.
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis-~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEE-TTEEEEECSSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecC-CCeEEEEcCCeeEEecccCCCCchhheecch
Confidence 556788 566666544 6899999999998888887677777777764 5577778888999999986567777776553
Q ss_pred ----CceEEEEEcCCCCEEEEEec-------CCeEEEEEcccceEeeee----------------------------cce
Q psy11036 127 ----KTVTSLCLASGGKRLISASL-------DHHAKIYEMTLKTVSSFT----------------------------GGL 167 (239)
Q Consensus 127 ----~~i~~i~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~----------------------------~~~ 167 (239)
..|..-..+++.++++..+- .|.+.+|..+.+..+.+. .+.
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 46777788899998876553 478889988733222221 123
Q ss_pred eEEEEEccCC--C------EEEEEEec---ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 168 DVCIWDMLGG--G------KLLHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 168 ~i~~~d~~~~--~------~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.+.++... + +.+..+-. ...-..++..|+....+..-+.-|.|.+||++++.++..-.
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 4555555322 0 01110101 12234567788877788888889999999999999987665
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.33 E-value=0.00011 Score=60.50 Aligned_cols=211 Identities=8% Similarity=0.002 Sum_probs=113.3
Q ss_pred CCEEEEeeC-CCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCC---EEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 7 ILIVALWDI-PSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSD---IVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 7 dg~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
++.|+-+|. .+|+.+..+.........+..+.. .....+++.|.++. +++.++.|+.|..+|.++++.+....
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~---~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~ 148 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCD---LVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVE 148 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSC---SCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCcccccccccc---ccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeec
Confidence 577888899 899988777654310000000000 00123455442222 37778889999999999999877653
Q ss_pred CCC-----CEEE-EEEecCCcEEEEeC------CCcEEEEEccCCCeEEEEEeccCCce---------------------
Q psy11036 83 HGS-----PVES-VLCLPSGGIFVTGG------GLDVCIWDMLGGGKLLHKFTCHHKTV--------------------- 129 (239)
Q Consensus 83 ~~~-----~v~~-~~~~~~~~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i--------------------- 129 (239)
... .+.+ -.. .++..++.++ ++.|.-+|.+ +++.+-++.......
T Consensus 149 ~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~-TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g 226 (599)
T 1w6s_A 149 NSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVK-TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLG 226 (599)
T ss_dssp CCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETT-TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHH
T ss_pred CCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECC-CCcEEEEEcCCCCccccccccccccccccccccccc
Confidence 211 1211 111 1454444332 5889999998 777776655322110
Q ss_pred -----------------EEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc----
Q psy11036 130 -----------------TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH---- 188 (239)
Q Consensus 130 -----------------~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~---- 188 (239)
..+++.++...+..+..++.. |+-..+.-..+ -...+..+|..+ ++.+-.++...
T Consensus 227 ~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p--~~~~~r~gd~~-y~~sv~Ald~~T-G~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 227 TGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP--WNETMRPGDNK-WTMTIFGRDADT-GEAKFGYQKTPHDEW 302 (599)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC--SCGGGSCSCCT-TSSEEEEEETTT-CCEEEEEESSTTCSS
T ss_pred cccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc--ccCcccCCCcc-ccceEEEEeCCC-CceeeEeecCCCccc
Confidence 134556666666766655421 22110000000 011344555554 34443333211
Q ss_pred ------CcEEEEEEc-cCC---CeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 189 ------KTVTSLCLA-SGG---KRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 189 ------~~v~~~~~s-~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.++. +... .+| ..++.++.+|.++++|.++|+++....
T Consensus 303 d~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 303 DYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1221 2222 467 567788999999999999999988766
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.32 E-value=0.00048 Score=52.44 Aligned_cols=188 Identities=13% Similarity=0.187 Sum_probs=115.6
Q ss_pred CCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecC---CCC---EEEEee-C--CCeEEEEeCC--C
Q psy11036 6 PILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV---SSD---IVISGS-Y--DKTVNVYDTR--S 74 (239)
Q Consensus 6 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~---~l~s~~-~--dg~v~vw~~~--~ 74 (239)
+.+.+.+||+ +|+.++.+... .+..+..-|. +++ ++++.. . +.+|++|++. +
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~g----------------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNTG----------------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECCS----------------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CCCCEEEEcC-CCcEEEEccCC----------------CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 3478999999 88888887642 3555555541 122 233333 3 5789999773 3
Q ss_pred CCceeeec-------CC-CCEEEEEE--ecC-Cc-EEEEeC-CCcEEEEEccC------CCeEEEEEeccCCceEEEEEc
Q psy11036 75 PDPVMSVN-------HG-SPVESVLC--LPS-GG-IFVTGG-GLDVCIWDMLG------GGKLLHKFTCHHKTVTSLCLA 135 (239)
Q Consensus 75 ~~~~~~~~-------~~-~~v~~~~~--~~~-~~-~l~~~~-~~~i~~~d~~~------~~~~~~~~~~~~~~i~~i~~~ 135 (239)
+ .+..+. .. ..+..+++ +|. +. ++++.. +|.+..|++.. ..+.++++.. .+.+..+...
T Consensus 111 ~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvD 188 (355)
T 3amr_A 111 G-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAAD 188 (355)
T ss_dssp C-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEE
T ss_pred C-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEc
Confidence 3 344442 11 45566777 664 44 455555 79999998842 2355666664 4578889999
Q ss_pred CCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe-c-ccCcEEEEEE--ccCCC-eEEEEc-CC
Q psy11036 136 SGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT-C-HHKTVTSLCL--ASGGK-RLISAS-LD 209 (239)
Q Consensus 136 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~-h~~~v~~~~~--s~~~~-~l~s~s-~d 209 (239)
+....|..+-++.-|..++.+... . ...+.+.... + -...+..|++ .++++ +|++++ .+
T Consensus 189 d~~g~Lyv~eEd~GIw~~da~p~~--~-------------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 189 DEYGRLYIAEEDEAIWKFSAEPDG--G-------------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp TTTTEEEEEETTTEEEEEECSTTS--C-------------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred CCCCeEEEecccceEEEEeCCcCC--C-------------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 888899999888665555543110 0 0122333221 1 1236778877 45555 565555 67
Q ss_pred ceEEEEEcc-CCeeeEEec
Q psy11036 210 HHAKIYEMV-NFSPVHTLD 227 (239)
Q Consensus 210 ~~i~iwd~~-~~~~~~~~~ 227 (239)
.+..+||.. +.+.+..+.
T Consensus 254 ~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 254 SSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp TEEEEEESSTTCCEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEE
Confidence 899999996 778888875
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.29 E-value=4e-06 Score=70.50 Aligned_cols=162 Identities=16% Similarity=0.046 Sum_probs=96.8
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-CCCCEEEEEEecCCcEEEEeC--C-CcEEEEEccCCCeEEE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--G-LDVCIWDMLGGGKLLH 120 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~-~~i~~~d~~~~~~~~~ 120 (239)
...+++.+.+++++++-...+.|.+.++........+. .......++++|.+..|+.+. . +.|..+++. +....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d--G~~~~ 532 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIY 532 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS--SCCCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC--CCCee
Confidence 45678876466677776677889999987554333332 234567889999766666554 2 678877775 22222
Q ss_pred EE-eccCCceEEEEEcCCCCEEE-EEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 121 KF-TCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 121 ~~-~~~~~~i~~i~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
.+ ...-.....|+++|++..|. +-...+.|..+++.+.....+ ............|++..
T Consensus 533 ~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~------------------~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI------------------LEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE------------------CCCSSSCSSCCCCEEET
T ss_pred EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE------------------EecCCcCCCceEeEEEC
Confidence 22 12223457899998765544 444567788888762111111 10011112233445544
Q ss_pred CCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 199 GGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
+ .++++....+.|..++..+++.+..+.
T Consensus 595 ~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 595 D-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp T-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred C-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 3 555666677899999998888887775
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.26 E-value=0.0013 Score=54.70 Aligned_cols=161 Identities=9% Similarity=-0.015 Sum_probs=102.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~ 118 (239)
.....+++.+.+++++++-...+.|.+.++........+ ..-.....++++|....|+.+. .+.|...++. ...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d-G~~- 157 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD-GSE- 157 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCS-
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC-CCc-
Confidence 346688998755667777777789999998754433333 3445678999999655555554 3677777876 322
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
...+...-.....++++++++.|..+. ..+.|..+|+++.. .+. +.........+++.
T Consensus 158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~------------------~~v---~~~~l~~P~glav~ 216 (628)
T 4a0p_A 158 RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN------------------REV---IADDLPHPFGLTQY 216 (628)
T ss_dssp CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------------------CEE---EEECCSCEEEEEEE
T ss_pred eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc------------------eEE---eeccCCCceEEEEE
Confidence 233333445678999999776665554 45778887776211 111 11222334567775
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
. +.++++-...+.|...|..+++....+.
T Consensus 217 ~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 217 Q-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp T-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred C-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 4 4555666668899999987777655554
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.20 E-value=0.00054 Score=53.42 Aligned_cols=148 Identities=9% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeeecCC-----CCEEEEEEecCCcEEEEeCCCcEEEEEccCCC-----------e
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHG-----SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG-----------K 117 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~-----------~ 117 (239)
++..++.+ .++.||.-++.....-+.+..+ ..+..+..+|+|.+++..++..|.|..+.... -
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 55555554 3478888888754434444222 26788999999999999999999999887211 0
Q ss_pred EEEEEec------cCCceEEEEEcCC---CCEEEEEecCCeEEEEEccc---ceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 118 LLHKFTC------HHKTVTSLCLASG---GKRLISASLDHHAKIYEMTL---KTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 118 ~~~~~~~------~~~~i~~i~~~~~---~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
..+.+.- ...+|..+.|+|- +..|++-..|+.|++||+.. +.. .+ ..... ...+.
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L-----------~k~~~-~fg~d 176 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VL-----------NKPNN-SFGLD 176 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EE-----------SCCCS-EEESC
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-ch-----------hcccc-ccCCC
Confidence 1223332 2467999999995 46899999999999999981 111 22 11111 11222
Q ss_pred cccCcEEEEEEccCCCeEEE--EcCCceEEEE
Q psy11036 186 CHHKTVTSLCLASGGKRLIS--ASLDHHAKIY 215 (239)
Q Consensus 186 ~h~~~v~~~~~s~~~~~l~s--~s~d~~i~iw 215 (239)
.....|.+++|..++-.|.. .+..|.|+-.
T Consensus 177 ~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 177 ARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 33467889999987765555 4466766543
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0014 Score=51.88 Aligned_cols=111 Identities=12% Similarity=0.084 Sum_probs=67.6
Q ss_pred CCeEEEEEecCCCCEEEEeeC-CC----eEEEEeCCCCCce--eeecCCCCEEEEEEec-CCcEEEEeC-CCcEEEEEcc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSY-DK----TVNVYDTRSPDPV--MSVNHGSPVESVLCLP-SGGIFVTGG-GLDVCIWDML 113 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~-dg----~v~vw~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~~~d~~ 113 (239)
.....+++++ +++.|+.+.. ++ .+.+.+. .+... ..+........++++| ++.++++-. .+.|..++..
T Consensus 179 ~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 179 SKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp SCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 5688999999 6774444443 22 3333443 33222 2332233456788999 666555554 6889999987
Q ss_pred CCCeEEEEEec-cCCceEEEEEcCCCCEEE-EEecCCeEEEEEcc
Q psy11036 114 GGGKLLHKFTC-HHKTVTSLCLASGGKRLI-SASLDHHAKIYEMT 156 (239)
Q Consensus 114 ~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~-~~~~d~~i~i~d~~ 156 (239)
.......... .......++|+|+|++|. +-...+.|..++.+
T Consensus 257 -~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 257 -TQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp -TTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred -CCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4443222221 223467899999999544 44567889888876
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.17 E-value=0.001 Score=50.27 Aligned_cols=154 Identities=6% Similarity=-0.095 Sum_probs=89.9
Q ss_pred CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC---CeEEEEEeccCCceEEEEEcCCCC
Q psy11036 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG---GKLLHKFTCHHKTVTSLCLASGGK 139 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~---~~~~~~~~~~~~~i~~i~~~~~~~ 139 (239)
..|+..|+.+.+....+.....+..++|++.+..++.+. .+.|..+++... ......+.........+++.+.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 468999998877666666667789999999766666655 588999998621 122222332334557889987554
Q ss_pred E-EEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-CC-ceEEEEE
Q psy11036 140 R-LISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-LD-HHAKIYE 216 (239)
Q Consensus 140 ~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d-~~i~iwd 216 (239)
. .++-...+.|.++++++..... ...........+++.|.+..|+.+. .. +.|..++
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~--------------------~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKT--------------------LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEE--------------------EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEE--------------------EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 4 4454567888888877221111 1122224567888888655444333 33 6777777
Q ss_pred ccCCeeeEEec--CCCCeeeeEecC
Q psy11036 217 MVNFSPVHTLD--YPSPVLSIDVSM 239 (239)
Q Consensus 217 ~~~~~~~~~~~--~~~~v~~~~~sp 239 (239)
+. |+....+. .-...+.++++|
T Consensus 150 ~d-G~~~~~~~~~~~~~P~gla~d~ 173 (316)
T 1ijq_A 150 LN-GVDIYSLVTENIQWPNGITLDL 173 (316)
T ss_dssp TT-SCCEEEEECSSCSCEEEEEEET
T ss_pred CC-CCCeEEEEECCCCCceEEEEec
Confidence 64 33333221 223456666653
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.16 E-value=7.6e-05 Score=63.39 Aligned_cols=109 Identities=12% Similarity=0.065 Sum_probs=67.1
Q ss_pred CeEEEEEe-cCCCCEEEEe-eCC----CeEEEEeCCCC-Cceee-ecCCCCEEEEEEecCCcEEEEeC-C-----CcEEE
Q psy11036 44 YVRAGTVS-PVSSDIVISG-SYD----KTVNVYDTRSP-DPVMS-VNHGSPVESVLCLPSGGIFVTGG-G-----LDVCI 109 (239)
Q Consensus 44 ~v~~~~~~-~~~~~~l~s~-~~d----g~v~vw~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~~ 109 (239)
.+...+|+ | ++++|+-+ ..+ .+|+++|+.++ +.+.. +. .....+.|+|+++.|+... + ..|.+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 9 77776643 223 35999999988 63211 11 1134678999998777665 3 24777
Q ss_pred EEccCCCe--EEEEEe-ccCCceEEEEEcCCCCEEEEEecC---CeEEEEEcc
Q psy11036 110 WDMLGGGK--LLHKFT-CHHKTVTSLCLASGGKRLISASLD---HHAKIYEMT 156 (239)
Q Consensus 110 ~d~~~~~~--~~~~~~-~~~~~i~~i~~~~~~~~l~~~~~d---~~i~i~d~~ 156 (239)
+++. +.+ ....+. ........+.|+|||++|+..+.+ ..|.++|+.
T Consensus 252 ~~lg-t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 252 HVMG-KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EETT-SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred EECC-CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 7776 322 122222 223346678999999988876533 234444443
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.14 E-value=0.00022 Score=60.57 Aligned_cols=119 Identities=8% Similarity=0.026 Sum_probs=68.4
Q ss_pred EEEEeeCCCc-ceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCce--ee
Q psy11036 9 IVALWDIPSE-AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYD-----KTVNVYDTRSPDPV--MS 80 (239)
Q Consensus 9 ~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~vw~~~~~~~~--~~ 80 (239)
.|+++|+.++ +.+. ..-. .....++|+| +++.|+....| ..|.++++.+++.. ..
T Consensus 202 ~l~v~dl~~g~~~l~---~~~~-------------~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv 264 (751)
T 2xe4_A 202 TIEFKRISDPSQTIA---DKVS-------------GTNGEIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCL 264 (751)
T ss_dssp EEEEEETTCTTCCCC---CCEE-------------EECSCCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEE
T ss_pred EEEEEECCCCCEeCC---cccc-------------CceeeEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEE
Confidence 5888898887 5321 1100 1123678999 66666555554 36888888776432 22
Q ss_pred e--cCCCCEEEEEEecCCcEEEEeC----CCcEEEEEccCCC-eE-EEEE-eccCCceEEEEEcCCCCEEEEEe
Q psy11036 81 V--NHGSPVESVLCLPSGGIFVTGG----GLDVCIWDMLGGG-KL-LHKF-TCHHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 81 ~--~~~~~v~~~~~~~~~~~l~~~~----~~~i~~~d~~~~~-~~-~~~~-~~~~~~i~~i~~~~~~~~l~~~~ 145 (239)
+ ........+.|+|+|++|+... ...|.++|+.... +. +..+ .........+.|+. |+.|+..+
T Consensus 265 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t 337 (751)
T 2xe4_A 265 YEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILT 337 (751)
T ss_dssp EECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEE
T ss_pred EecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEe
Confidence 2 2334467889999999888665 2458888887321 22 1333 22344555555544 44444433
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.14 E-value=1.3e-05 Score=67.32 Aligned_cols=156 Identities=10% Similarity=-0.090 Sum_probs=88.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC----CCceeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS----PDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~ 115 (239)
..+..++|.+.++.++++-...+.|+.+++.. ......+. .......+++.+.+..|+.+. .+.|.++++. .
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d-g 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-G 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS-S
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC-C
Confidence 45668999984445555555678899999875 22222221 223345678886555555554 5889999986 3
Q ss_pred CeEEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEE
Q psy11036 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTS 193 (239)
Q Consensus 116 ~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~ 193 (239)
......+.........+++.|.+.+|+.... .+.|..+++.+.....+ ....-.....
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l--------------------~~~~l~~PnG 544 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL--------------------VTENIQWPNG 544 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE--------------------SCSSCSSCCC
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE--------------------EeCCCCCccE
Confidence 3322222322345678899986655554432 25676666652111111 0111223456
Q ss_pred EEEccCCC-eEEEEcCCceEEEEEccC
Q psy11036 194 LCLASGGK-RLISASLDHHAKIYEMVN 219 (239)
Q Consensus 194 ~~~s~~~~-~l~s~s~d~~i~iwd~~~ 219 (239)
|+++|++. ++++-+..+.|..+++..
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCC
Confidence 88888644 445555677888888754
No 284
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.12 E-value=0.0026 Score=52.83 Aligned_cols=178 Identities=8% Similarity=-0.072 Sum_probs=107.2
Q ss_pred CCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecC-CC
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNH-GS 85 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~ 85 (239)
...|+..++++......+.... -..+..++|++.++.++++-..++.|..+++........+.. ..
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~-------------~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTG-------------VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCS-------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred CCcEEEEECCCCCcceEEEcCC-------------CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 4567777776554333332211 046889999995566666767789999999875544333332 24
Q ss_pred CEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcccceEe
Q psy11036 86 PVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMTLKTVS 161 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~ 161 (239)
....+++.+.+..|+.+. .+.|.+.++. .......+...-.....|++.|....|..... .+.|...++++....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT-STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecC-CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 577899998766666555 4889999987 32222222233445689999986555555442 466776666622111
Q ss_pred eeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEE-EEcCCceEEEEEccC
Q psy11036 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMVN 219 (239)
Q Consensus 162 ~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~i~iwd~~~ 219 (239)
.+ ...-.....|+++++++.|. +-...+.|..+|+..
T Consensus 160 ~l---------------------~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 160 TL---------------------VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp EE---------------------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EE---------------------ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 11 11234466778877655443 444566777777754
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.11 E-value=0.0013 Score=54.50 Aligned_cols=163 Identities=9% Similarity=-0.061 Sum_probs=98.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cCCCCEEEEEEecCCcEEEEeC---CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGG---GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~i~~~d~~~~~~~ 118 (239)
.....+++.+.+++++++-...+.|.+.++........+ ..-.....++++|.+..|+.+. .+.|...++. ....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSR 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCce
Confidence 567899999855667777777899999998755433333 3445577899999766555554 3567777775 2222
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISAS-LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 197 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s 197 (239)
.......-.....+++++++..|..+. ..+.|..+|+++.....+ ..+.......+++.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~--------------------~~~~~~~P~gi~~~ 222 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--------------------VKGSLPHPFALTLF 222 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------------CCCEEES
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE--------------------EeCCCCCceEEEEe
Confidence 222323344578999998766555543 456777777763221111 01011112355665
Q ss_pred cCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 198 SGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 198 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+ .++.+-...+.|...|..+++....+.
T Consensus 223 ~~-~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 223 ED-ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp SS-EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred CC-EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 54 455555567889999988887665554
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.09 E-value=0.003 Score=52.40 Aligned_cols=157 Identities=8% Similarity=-0.066 Sum_probs=94.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eeeec-CCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~~~~ 118 (239)
.....++|++.++.++++-...+.|..+++..... ...+. .-.....+++.+.+..++.+. .+.|.+.++. ....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~~~ 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSLR 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC-CCCE
Confidence 56789999995555666655678899999875532 22232 235788999999766666655 5889999997 3322
Q ss_pred EEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 119 LHKFTCHHKTVTSLCLASGGKRLISASL--DHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
.............|++.|.+..|..... .+.|...++++.....+ ....-.....|++
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l--------------------~~~~~~~P~Glal 178 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII--------------------INSEIYWPNGLTL 178 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE--------------------ECSSCSSEEEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE--------------------EeCCCCCCcEEEE
Confidence 2223234445678999997655555443 35666666552211111 1112344678888
Q ss_pred ccCCCeE-EEEcCCceEEEEEccCC
Q psy11036 197 ASGGKRL-ISASLDHHAKIYEMVNF 220 (239)
Q Consensus 197 s~~~~~l-~s~s~d~~i~iwd~~~~ 220 (239)
+++++.| ++-+..+.|..+|+...
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSCC
T ss_pred EccCCEEEEEeCCCCeEEEecCCCC
Confidence 8865544 44455677888877543
No 287
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.05 E-value=0.0044 Score=53.00 Aligned_cols=159 Identities=9% Similarity=0.088 Sum_probs=102.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-------CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-------HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGG 115 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~ 115 (239)
..|.++...+ ++. |..|+.++-|..++..+........ ....|.++...++|.+.+...++.|..|+.. .
T Consensus 310 ~~i~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~-~ 386 (795)
T 4a2l_A 310 RSVRSIFMDS-QGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPI-T 386 (795)
T ss_dssp SCEEEEEECT-TSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTT-T
T ss_pred CcEEEEEEeC-CcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCC-C
Confidence 6799998887 454 5557777778888876554322111 2356999999999988876667789999876 3
Q ss_pred CeEEEEEe---------ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEec
Q psy11036 116 GKLLHKFT---------CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC 186 (239)
Q Consensus 116 ~~~~~~~~---------~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 186 (239)
++ ...+. .....|.++...++++.|..|+.++-+..+|.+......+ .... . ..
T Consensus 387 ~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~---------~~~~-~------~l 449 (795)
T 4a2l_A 387 QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF---------NQRN-S------QL 449 (795)
T ss_dssp CC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE---------CTTT-S------CC
T ss_pred Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe---------ecCC-C------Cc
Confidence 33 22222 1235788999888887567777777788888762222222 0000 0 01
Q ss_pred ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 187 h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
....|.++...++|++.+... + -+.+||..+++..
T Consensus 450 ~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 450 VNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFT 484 (795)
T ss_dssp SCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEE
T ss_pred CCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEE
Confidence 345688998888888666554 4 4888998776543
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.05 E-value=0.0025 Score=49.96 Aligned_cols=161 Identities=5% Similarity=-0.106 Sum_probs=92.8
Q ss_pred EEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC---CeEEEEEeccCCceEE
Q psy11036 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG---GKLLHKFTCHHKTVTS 131 (239)
Q Consensus 57 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~---~~~~~~~~~~~~~i~~ 131 (239)
+|+.+. ...|+..++........+.....+..++|++.+..|+.+. .+.|..+++... ......+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444433 4689999998776655556667889999999777666665 588888888621 1223333334456788
Q ss_pred EEEcCCC-CEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEEc-C-
Q psy11036 132 LCLASGG-KRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISAS-L- 208 (239)
Q Consensus 132 i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~- 208 (239)
+++.+.+ ++.++-...+.|.+.++++.... ..+...-.....+++.|.+.+|+.+. .
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~--------------------~l~~~~~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--------------------TLFRENGSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEE--------------------EEEECSSCCEEEEEEETTTTEEEEEECSS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceE--------------------EEEeCCCCCcceEEEecccCeEEEEeCCC
Confidence 9998744 44455555678888887722111 11122223466788887555444333 2
Q ss_pred CceEEEEEccCCeeeEEec-CCCCeeeeEec
Q psy11036 209 DHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238 (239)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s 238 (239)
.+.|...++........+. .-...+.|+++
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~l~~P~glavd 254 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTENIQWPNGITLD 254 (400)
T ss_dssp SCCEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred CCEEEEEeCCCCccEEEEECCCCceEEEEEE
Confidence 3567777764332222222 12345555554
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.04 E-value=0.0007 Score=53.64 Aligned_cols=154 Identities=8% Similarity=-0.001 Sum_probs=91.3
Q ss_pred CeEEEEEecC--CCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCC-----cEEEEEccCCC
Q psy11036 44 YVRAGTVSPV--SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGL-----DVCIWDMLGGG 116 (239)
Q Consensus 44 ~v~~~~~~~~--~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~i~~~d~~~~~ 116 (239)
....++++|+ +++++++ ...+.|+.++..+++.............+++++++.++++...+ .+...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999983 3444444 33388999999877655544555668999999999955554321 13333332111
Q ss_pred eEEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 117 KLLHKFTCHHKTVTSLCLAS-GGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
.....+. .......++++| ++.++++-..++.|+.+|.. +.....+ .. .+....-..+
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~------------------~~-~~~~~~~~~i 278 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE------------------VM-MDTKGSNFHI 278 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE------------------EE-CSCCSSCEEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE------------------ec-cCCCCCcccE
Confidence 1111222 234456788999 66666565567788888776 2211111 00 1111223469
Q ss_pred EEccCCCe-EEEEcCCceEEEEEcc
Q psy11036 195 CLASGGKR-LISASLDHHAKIYEMV 218 (239)
Q Consensus 195 ~~s~~~~~-l~s~s~d~~i~iwd~~ 218 (239)
+|+|++++ +++-...+.|+.+++.
T Consensus 279 a~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 279 VWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 99999984 4555667899998865
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.99 E-value=0.00052 Score=56.51 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=83.2
Q ss_pred CEEEEeeCCCcceeeeeeCCc-eeeccceeeccCCCCCeEEEEEe-cCCC---CEEEEeeCCCeEEEEeCCCCCceeeec
Q psy11036 8 LIVALWDIPSEAQVSTFTNHT-TIYKVPLMLYSTPQDYVRAGTVS-PVSS---DIVISGSYDKTVNVYDTRSPDPVMSVN 82 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~~l~s~~~dg~v~vw~~~~~~~~~~~~ 82 (239)
+.|..+|.++|+.+..++... ..+ .+.....++. +... . ++ ..++.++.+|.++++|.++++.+..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~w-----d~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAW-----DFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCS-----CCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcc-----cccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 689999999999988876421 000 0000012222 2222 3 45 378889999999999999998776552
Q ss_pred CCC--------------CE--------------------------------EEEEEecCCcEEEEeC-------------
Q psy11036 83 HGS--------------PV--------------------------------ESVLCLPSGGIFVTGG------------- 103 (239)
Q Consensus 83 ~~~--------------~v--------------------------------~~~~~~~~~~~l~~~~------------- 103 (239)
... ++ ..++++|+...+++..
T Consensus 364 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~ 443 (582)
T 1flg_A 364 FVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVS 443 (582)
T ss_dssp SSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCC
T ss_pred cccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeeccccc
Confidence 111 00 1235566544443321
Q ss_pred ---------------------CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 104 ---------------------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 104 ---------------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.|.|.-||+. +++.+-+.... .++..-.....+..++.++.|+.++.||.+
T Consensus 444 ~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~-tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 444 YTKGSAYLGMGFRIKRMYDDHVGSLRAMDPV-SGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp CCTTSCCCCEEEEEEESCSSCSEEEEEECTT-TCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred ccCCCceeccceeecCCCCCCcceEEEEECC-CCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECC
Confidence 3678888988 66666555432 222221122246677789999999999987
No 291
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.93 E-value=0.0077 Score=51.50 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=100.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-----CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-----HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~ 117 (239)
..|.++...+ ++++|..|+.++-|..+|..+++...... ....|.++...+++.+.+... +.+.+||.. .++
T Consensus 406 ~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~-~~~ 482 (795)
T 4a2l_A 406 NNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPE-QRS 482 (795)
T ss_dssp SCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETT-TTE
T ss_pred ccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCC-CCe
Confidence 6799999887 66646677877789999988776433221 245789999988888777766 568889986 443
Q ss_pred EEEEEec-------cCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCc
Q psy11036 118 LLHKFTC-------HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKT 190 (239)
Q Consensus 118 ~~~~~~~-------~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~ 190 (239)
. ..+.. ....|.++...++|+..+.. . +-+..||...... .+.. .... -......
T Consensus 483 ~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-~~~~---------~~~~-----~~l~~~~ 544 (795)
T 4a2l_A 483 F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-QKAS---------ILPV-----SNVTKLF 544 (795)
T ss_dssp E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE-EECC---------CSCS-----CGGGGSC
T ss_pred E-EEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE-EEec---------CCCC-----CCCCCCe
Confidence 2 22221 23578899988888765544 4 4477777762211 1100 0000 0123457
Q ss_pred EEEEEEccCCCeEEEEcCCceEEEEEccCCee
Q psy11036 191 VTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222 (239)
Q Consensus 191 v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 222 (239)
|.++...++|++.++.. . -|..||..+++.
T Consensus 545 i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 545 TNCIYEASNGIIWVGTR-E-GFYCFNEKDKQI 574 (795)
T ss_dssp EEEEEECTTSCEEEEES-S-CEEEEETTTTEE
T ss_pred eEEEEECCCCCEEEEeC-C-CceeECCCCCcE
Confidence 88999888888666554 3 577888876654
No 292
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.87 E-value=0.0038 Score=46.82 Aligned_cols=140 Identities=8% Similarity=0.035 Sum_probs=80.8
Q ss_pred EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eee--------e--cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEc
Q psy11036 46 RAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMS--------V--NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDM 112 (239)
Q Consensus 46 ~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~-~~~--------~--~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~ 112 (239)
..++..+ ++..+++-..++.|.++|..+++. +.. . ..-.....+ +|++..++++. .+.|..+++
T Consensus 120 ~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~ 196 (306)
T 2p4o_A 120 NGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV 196 (306)
T ss_dssp EEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred CcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence 3444444 444555555678898888765421 110 0 111234555 78887777665 588999998
Q ss_pred cCCCeE--EEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCc
Q psy11036 113 LGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKT 190 (239)
Q Consensus 113 ~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~ 190 (239)
...+.. ...+.. ......+++.++|+++++....+.|.++|..++.. .+..+......
T Consensus 197 ~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~-------------------~~~~~~~~~~~ 256 (306)
T 2p4o_A 197 DSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTT-------------------IIAQAEQGVIG 256 (306)
T ss_dssp CTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEE-------------------EEECGGGTCTT
T ss_pred CCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEE-------------------EEeecccccCC
Confidence 632221 112211 13456788999998777776778888887652110 01111222345
Q ss_pred EEEEEEc---cCCCeEEEEcC
Q psy11036 191 VTSLCLA---SGGKRLISASL 208 (239)
Q Consensus 191 v~~~~~s---~~~~~l~s~s~ 208 (239)
.++++|. |+++.|+.++.
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEEC
T ss_pred ceEEEEecccCCCCEEEEECC
Confidence 7899998 88776655543
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.87 E-value=0.0027 Score=53.04 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=69.9
Q ss_pred EEEEecCCCCEEEEeeCCC-----------eEEEEeCCCCCcee--eec--CCCCEEEEEEecCCcEEEEeC--CCcEEE
Q psy11036 47 AGTVSPVSSDIVISGSYDK-----------TVNVYDTRSPDPVM--SVN--HGSPVESVLCLPSGGIFVTGG--GLDVCI 109 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg-----------~v~vw~~~~~~~~~--~~~--~~~~v~~~~~~~~~~~l~~~~--~~~i~~ 109 (239)
..++.+.++++++.|+.+. .+.+||..+++... .+. ......++++.+++++++.|+ +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5566653577888877543 58899998876433 221 223344567788999999998 368999
Q ss_pred EEccCCCeEEEEEeccCC-ceEEEEEcCCCCEEEEEe-cC-----CeEEEEEcc
Q psy11036 110 WDMLGGGKLLHKFTCHHK-TVTSLCLASGGKRLISAS-LD-----HHAKIYEMT 156 (239)
Q Consensus 110 ~d~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~l~~~~-~d-----~~i~i~d~~ 156 (239)
||.. ..+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..
T Consensus 270 yd~~-t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSS-SDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGG-GTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCc-CCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 9997 4332221111111 123455667899999998 34 568999987
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.0024 Score=51.18 Aligned_cols=161 Identities=9% Similarity=0.018 Sum_probs=94.8
Q ss_pred CeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeeecC----CCCEEEEEE-------ecCCcEEEEeCC-C-c---
Q psy11036 44 YVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSVNH----GSPVESVLC-------LPSGGIFVTGGG-L-D--- 106 (239)
Q Consensus 44 ~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~-~-~--- 106 (239)
....|+|.|. +++++++....+.|++.|+.++........ ......++| ++++..|+++.+ + .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 455666655557899999887665444322 235899999 999997777663 2 2
Q ss_pred ---EEEEEccCCCeEE-----EEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEEcc-------cceEe-----eeec
Q psy11036 107 ---VCIWDMLGGGKLL-----HKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMT-------LKTVS-----SFTG 165 (239)
Q Consensus 107 ---i~~~d~~~~~~~~-----~~~~~~~~~i~~i~~~~~-~~~l~~~~~d~~i~i~d~~-------~~~~~-----~~~~ 165 (239)
|.+++....+... ..+.... ....++++|+ +.++++-..++.|..+|+. ...+. ...|
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 5566533211211 2222222 3357888995 4555566677888888875 12110 0000
Q ss_pred ceeEEEEEccCCCEEEEEEecccCcEEEEEEccCCCe-EEEEcCCceEEEEEc
Q psy11036 166 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYEM 217 (239)
Q Consensus 166 ~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~d~~i~iwd~ 217 (239)
..+.+... +.......++|+|+|++ +++-+..+.|+.++.
T Consensus 299 -----------~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 299 -----------TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp -----------TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred -----------ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 00111111 22344678999999995 455567789998665
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.83 E-value=0.0044 Score=49.07 Aligned_cols=170 Identities=12% Similarity=0.068 Sum_probs=95.7
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee---cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC-CeE
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG-GKL 118 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~-~~~ 118 (239)
...++++|.++.++++-..++.|+.++..++.....+ ........++++|+++.|+.+. .+.|..++.... +..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 3457788855666666667788999998877652322 2223345799999999666655 578998886521 111
Q ss_pred --EEEEecc---------------CCceEEEEE---------cCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEE
Q psy11036 119 --LHKFTCH---------------HKTVTSLCL---------ASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172 (239)
Q Consensus 119 --~~~~~~~---------------~~~i~~i~~---------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~ 172 (239)
...+.+. -.....+++ .++|.++++-...+.|+.++..+ .+..+.|......+
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~ 388 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREW 388 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-EEEEEECCCTTCSS
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-CEEEEEeCCCCCcc
Confidence 1122111 123566888 66666666666667787777543 22222221100000
Q ss_pred EccCCCEEEEEEecccCcEEEEEEc-cCCCeEEEEcCCceEEEEEcc
Q psy11036 173 DMLGGGKLLHKFTCHHKTVTSLCLA-SGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 173 d~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~d~~i~iwd~~ 218 (239)
-.. .+... ....-.....|++. ++|.++++-...+.|+.++++
T Consensus 389 G~~-dG~~~--~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 389 GYV-DGELR--SQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCB-CEETT--TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccC-CCccc--cccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 000 00000 00011346789999 677777777778889888764
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.82 E-value=0.0057 Score=46.62 Aligned_cols=167 Identities=16% Similarity=0.168 Sum_probs=103.9
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecC----CcE--EEEeC--C---CcEEEEEccCCCeEEEEEe
Q psy11036 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPS----GGI--FVTGG--G---LDVCIWDMLGGGKLLHKFT 123 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~~~--~---~~i~~~d~~~~~~~~~~~~ 123 (239)
..+++.....+-+.+||+ +++.+..+.. +.+..+..-|. |+. ++.++ + ++|.+|++......+..+.
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 456676677889999999 7888888754 67788777763 222 33333 3 5799998842233354442
Q ss_pred c------cC-CceEEEEE--cCC-CC-EEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 124 C------HH-KTVTSLCL--ASG-GK-RLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 124 ~------~~-~~i~~i~~--~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
. .. ..+..+++ +|. ++ ++++...+|.+..|++....-... ..+.++++.. .+.+.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~-------------~~~lVR~f~l-gsq~E 183 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI-------------SGKKVRAFKM-NSQTE 183 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE-------------EEEEEEEEEC-SSCEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc-------------cceEEEEecC-CCCcc
Confidence 1 11 45667887 664 43 677888889999988850000000 1344555554 34677
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEcc-----CCeeeEEecCC---CCeeeeEe
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMV-----NFSPVHTLDYP---SPVLSIDV 237 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~-----~~~~~~~~~~~---~~v~~~~~ 237 (239)
.+...+....|+.+-+|.-|..++.+ +++.+..+... ..+..|++
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai 236 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI 236 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE
Confidence 88888888888888888666666654 35566655422 34555554
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.79 E-value=0.0037 Score=47.25 Aligned_cols=110 Identities=14% Similarity=0.163 Sum_probs=77.2
Q ss_pred CeEEEEE---ecCCCCEEEEee-------------CCCeEEEEeCC---CCCceeeec--------------CCCCEEEE
Q psy11036 44 YVRAGTV---SPVSSDIVISGS-------------YDKTVNVYDTR---SPDPVMSVN--------------HGSPVESV 90 (239)
Q Consensus 44 ~v~~~~~---~~~~~~~l~s~~-------------~dg~v~vw~~~---~~~~~~~~~--------------~~~~v~~~ 90 (239)
.+..+.| .| .+.++++.. .+..|..+|+. +++.+.... .......+
T Consensus 64 ~~sGl~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 3578999 58 566766533 15779999999 777665442 11248899
Q ss_pred EEecCCcEEEEeC-C-CcEEEEEccCCCeEEEEEec------cCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 91 LCLPSGGIFVTGG-G-LDVCIWDMLGGGKLLHKFTC------HHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 91 ~~~~~~~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
+..++|+..++++ . +.|...+.. ++.+..+.. .....+.|+++|+|+.|++...++.+.-+|++
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 9999999988877 5 666666654 333332211 11236799999999988888779999999977
No 298
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.014 Score=49.80 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=97.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec---CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLL 119 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~ 119 (239)
..|.++...+ ++.+ ..|+.++-+..++..+++...... ....|.++...+++.+.+... +.+..+|.. .++..
T Consensus 407 ~~v~~i~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~-~~~~~ 482 (781)
T 3v9f_A 407 NSVLCSLKDS-EGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLA-SKKVI 482 (781)
T ss_dssp SBEEEEEECT-TSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESS-SSSCC
T ss_pred cceEEEEECC-CCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCC-CCeEE
Confidence 6788998876 4554 446766778899987664332211 346789999888888776665 668889986 33322
Q ss_pred EEEecc-----CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 120 HKFTCH-----HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 120 ~~~~~~-----~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
...... ...|.++...++|+..+ |+.++-+..+|.+...+..+ .... ......|.++
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~---------~~~~--------~l~~~~i~~i 544 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKF---------NQYE--------GFCSNTINQI 544 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEE---------CTTT--------TCSCSCEEEE
T ss_pred ecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEc---------cCCC--------CCCCCeeEEE
Confidence 222211 35789998888887554 44433466677652222222 0000 0123568888
Q ss_pred EEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 195 CLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
...++|.+.++.. +|.|..||..+++
T Consensus 545 ~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 545 YRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp EECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred EECCCCCEEEEEC-CCceEEECCCCCc
Confidence 8888888766554 6765888877654
No 299
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.72 E-value=0.0036 Score=56.11 Aligned_cols=178 Identities=12% Similarity=0.142 Sum_probs=115.2
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEecc-
Q psy11036 47 AGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH- 125 (239)
Q Consensus 47 ~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~- 125 (239)
+.-.+| ..+.++.-. ..++.|+|+++.+.+..+....+|.--.|- +.+.++..++..|..|++.....+.+.+..|
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWi-s~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVTDNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hhccCC-CcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEec-CCCeeEEEcCCeEEEeccCCCCccHHHHhcch
Confidence 455677 566666543 689999999998888877767777766775 3557777788899999997544555555444
Q ss_pred ---CCceEEEEEcCCCCEEEEEe-------cCCeEEEEEcccceEeee----------------------------ecce
Q psy11036 126 ---HKTVTSLCLASGGKRLISAS-------LDHHAKIYEMTLKTVSSF----------------------------TGGL 167 (239)
Q Consensus 126 ---~~~i~~i~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~----------------------------~~~~ 167 (239)
...|..-..+++.++++..| ..|.+.+|..+.+..+.+ ..++
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 45677778888999877655 348888998862221111 1123
Q ss_pred eEEEEEccCC--CEE------EEEEec---ccCcEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 168 DVCIWDMLGG--GKL------LHKFTC---HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 168 ~i~~~d~~~~--~~~------~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.+.++... +.+ +..+-. ...-..++..++....+..-+.-|.|.+||+.|+.++..-.
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 4556655332 100 000101 11223456677766777778889999999999998765433
No 300
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.66 E-value=0.0016 Score=54.53 Aligned_cols=68 Identities=18% Similarity=0.310 Sum_probs=46.3
Q ss_pred eEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeC--C-----CcEEEEEcc
Q psy11036 45 VRAGTVSPVSSDIVISGSY-DKTVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGG--G-----LDVCIWDML 113 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~-dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~--~-----~~i~~~d~~ 113 (239)
..++++.. ++.+++.|+. +..+.+||..+.+.... +.....-.+++..+++++++.|+ + ..+.+||..
T Consensus 245 ~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 33567777 7889999884 46899999887654332 22222223455667899998887 2 468999987
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.02 Score=45.95 Aligned_cols=177 Identities=13% Similarity=0.095 Sum_probs=96.2
Q ss_pred eEEEEEecCCCCEEEEeeCCCeEEEEeCC-------CCCc--------------eeeecCCCCEEEEEEecCCcEEEEeC
Q psy11036 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTR-------SPDP--------------VMSVNHGSPVESVLCLPSGGIFVTGG 103 (239)
Q Consensus 45 v~~~~~~~~~~~~l~s~~~dg~v~vw~~~-------~~~~--------------~~~~~~~~~v~~~~~~~~~~~l~~~~ 103 (239)
...++++|.++.++++-..++.|..+|+. ++.. +...........++|+|++..|+.+.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 34778888667777777788899999987 5543 11223345568999999999666554
Q ss_pred --CCcEEEEEccCCCeEE---EEEecc---C------------CceE-EEEEc-------CCCCEEEEEecCCeEEEEEc
Q psy11036 104 --GLDVCIWDMLGGGKLL---HKFTCH---H------------KTVT-SLCLA-------SGGKRLISASLDHHAKIYEM 155 (239)
Q Consensus 104 --~~~i~~~d~~~~~~~~---~~~~~~---~------------~~i~-~i~~~-------~~~~~l~~~~~d~~i~i~d~ 155 (239)
.+.|+.++.......+ ..+-+. . .... .++.. +++.++++=.....|+.++.
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 5788887665222111 222221 0 1123 33443 34444555445566666664
Q ss_pred ccceEeeeecceeE------EEEEccCCCEEEEEEecccCcEEEEEEccC-CCeEEEEcCCceEEEEEccCCeeeEE
Q psy11036 156 TLKTVSSFTGGLDV------CIWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNFSPVHT 225 (239)
Q Consensus 156 ~~~~~~~~~~~~~i------~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~ 225 (239)
.+ .+.++.|.+.. ..|-.. .+.+. ....-.....|++.++ |.++++=+..+.||.++++.......
T Consensus 409 ~G-~v~TiaG~g~~~~~~~~~~~G~~-dG~~~--~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 409 EG-IVSTYAGRGASTSLADGNQWGTD-DGDLR--EVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp TC-BEEEEEESCTTHHHHHSCSCCCC-CEETT--TTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred CC-CEEEEecccccccccCccccccC-CCCch--hhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence 33 23333221100 000000 00000 0011234678999996 77777777889999999876555443
No 302
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.038 Score=47.16 Aligned_cols=156 Identities=12% Similarity=0.027 Sum_probs=96.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee----------cCCCCEEEEEEecCCcEEEEeCCCcEEEEEc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV----------NHGSPVESVLCLPSGGIFVTGGGLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~ 112 (239)
..|.++...+ ++. |..|+.++-|..++..+....... -....|.++...+++.+.+...++.|..|+.
T Consensus 313 ~~v~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 313 ASARYIFQDS-FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFEN 390 (781)
T ss_dssp SCEEEEEECS-SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEET
T ss_pred CeEEEEEEeC-CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEEC
Confidence 6799998887 454 556776777888887765432211 0235689999988888777665667888887
Q ss_pred cCCCeEEEEE----eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 113 LGGGKLLHKF----TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 113 ~~~~~~~~~~----~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
. .+. ...+ ......|.++...+++... .|+.++-+..++.+...+..+. . . ....
T Consensus 391 ~-~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~-----------~-~------~~~~ 449 (781)
T 3v9f_A 391 G-KRV-AIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIE-----------L-E------KNEL 449 (781)
T ss_dssp T-EEE-EECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECC-----------S-T------TTCC
T ss_pred C-CCe-EEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEec-----------c-C------CCCC
Confidence 5 222 2211 1234578888887777644 4666666777776522111110 0 0 1124
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEccCCeee
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 223 (239)
..|.++...++|.+.+.. . +-|..||..+++..
T Consensus 450 ~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVI 482 (781)
T ss_dssp CCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCC
T ss_pred CeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEE
Confidence 568888888888766544 3 45888888776543
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.47 E-value=0.0065 Score=47.49 Aligned_cols=121 Identities=9% Similarity=0.140 Sum_probs=82.0
Q ss_pred EEecCCcEEEEeCCCcEEEEEccCCCeEEEEEecc----CCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEee---
Q psy11036 91 LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH----HKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSS--- 162 (239)
Q Consensus 91 ~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~--- 162 (239)
....+|..++.+.++.|+.-++. .....+.++.. -..|..+..+|+|++||..+ +..|.|..+. +.....
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~-~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVL-TDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETT-TCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEECCEEEEEECC-CCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 34557888888888899988886 33345555432 23688899999999999885 5578888887 321111
Q ss_pred eecceeEEEEEccCCCEEEEEEecccCcEEEEEEccC---CCeEEEEcCCceEEEEEccC
Q psy11036 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG---GKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 163 ~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~i~iwd~~~ 219 (239)
..+...++.|.+.... .....+|..+.|+|- +..|++-..|+.|++||+..
T Consensus 105 ~~~~~q~~ty~l~~~~------~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEE------VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HHHTTEEEEEEGGGCC--------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccccceeEEEcCCcc------cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 0122334555553210 113578999999994 56788899999999999975
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.45 E-value=0.057 Score=48.21 Aligned_cols=177 Identities=9% Similarity=0.093 Sum_probs=106.2
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEec---CCCCEEEEee----------CCCeEEEEeCCC
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP---VSSDIVISGS----------YDKTVNVYDTRS 74 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~s~~----------~dg~v~vw~~~~ 74 (239)
+.|++.|..+.+.+..+.-... ..+.+++... +...+++.|. ..|.|.+|++..
T Consensus 807 s~i~lidp~t~~~i~~~~l~~n-------------E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~ 873 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQN-------------EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD 873 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTT-------------EEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET
T ss_pred EEEEEEeCCCCeEEEEEeCCCC-------------cceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC
Confidence 5688888888877766654331 4455655432 2346888775 347899999874
Q ss_pred CCcee--eecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy11036 75 PDPVM--SVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152 (239)
Q Consensus 75 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i 152 (239)
++... ....++++++++-- +| +++++-...+++|++............+ ..|..+.....+++++.|..-..|.+
T Consensus 874 ~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~ 950 (1158)
T 3ei3_A 874 GKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLL 950 (1158)
T ss_dssp TEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEE
T ss_pred CEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEE
Confidence 43222 22467889988755 35 6666667889999997333222122212 12333333335678888877777766
Q ss_pred EEcccceEeeeecceeEEEEEccCCCEEEEEE-ecccCcEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 153 ~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
...+ .. ..+..... ..+...++++.+-.+ ..++.+..+|.+.+.....
T Consensus 951 ~~y~-----------------~~-~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 951 LAYK-----------------PM-EGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEE-----------------TT-TTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EEEE-----------------cC-CCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 5544 11 12222111 234566888887654 4677788899999987643
No 305
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.43 E-value=0.006 Score=43.26 Aligned_cols=103 Identities=7% Similarity=-0.031 Sum_probs=66.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeecCCCC--------EEEEEEecCCcEEEEeCCCcEEEEEccC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSP--------VESVLCLPSGGIFVTGGGLDVCIWDMLG 114 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~~~i~~~d~~~ 114 (239)
..++.++|+| ++.+.++ .+|.+.-.+..+.+...-+..... -.++.|.|+|.+.++ +||.|.-++...
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 4677999999 7887776 678777777655333222221222 378899999988888 778887776532
Q ss_pred CCeE------EEEEeccCCceEEEEEcCCCCEEEEEecCCeEE
Q psy11036 115 GGKL------LHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151 (239)
Q Consensus 115 ~~~~------~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~ 151 (239)
+... ...-...=..+..+.+.|+|.+.++. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 1110 11111112467999999999877776 77743
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.31 E-value=0.021 Score=43.86 Aligned_cols=109 Identities=8% Similarity=0.046 Sum_probs=61.0
Q ss_pred CCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEEEe---ccCCceEEEEEcCC---CCEEEEEec-C-----CeEE
Q psy11036 84 GSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT---CHHKTVTSLCLASG---GKRLISASL-D-----HHAK 151 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~i~~i~~~~~---~~~l~~~~~-d-----~~i~ 151 (239)
-.....++|.|+|+++++-..+.|.+++ ....+.+..+. ........|+++|+ +..|..+.. . +.|.
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3456799999999977776689999888 31222222221 12346789999998 444444433 2 4566
Q ss_pred EEEcccceEeeeecceeEEEEEccCCCEEEEEEe---cccCcEEEEEEccCCCeEEEEc
Q psy11036 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT---CHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 152 i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.++.....+... ...+..+. ........++|.|||.+.++.+
T Consensus 109 r~~~~~~~~~~~--------------~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLD--------------RVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEE--------------EEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCce--------------EEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 665542111000 01111122 1112235889999998777653
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.13 E-value=0.055 Score=41.53 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=60.9
Q ss_pred CCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe-EEEEEe---ccCCceEEEEEcCC---CCEEEEEec----C----C
Q psy11036 84 GSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK-LLHKFT---CHHKTVTSLCLASG---GKRLISASL----D----H 148 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~-~~~~~~---~~~~~i~~i~~~~~---~~~l~~~~~----d----~ 148 (239)
-.....++|.|+|+++++-.++.|.+++. .++ .+..+. ........|+++|+ +..|..+.. + +
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~--~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISP--SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECS--SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeC--CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578999999999777766899998874 343 222221 12346789999997 444444332 2 4
Q ss_pred eEEEEEcccc--eEeeeecceeEEEEEccCCCEEEEEEe-cccCcEEEEEEccCCCeEEEEc
Q psy11036 149 HAKIYEMTLK--TVSSFTGGLDVCIWDMLGGGKLLHKFT-CHHKTVTSLCLASGGKRLISAS 207 (239)
Q Consensus 149 ~i~i~d~~~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s 207 (239)
.|..++.... .+... ...+..+. ...+....|+|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~--------------~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEV--------------KTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEE--------------EEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCcc--------------EEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 5555555411 00000 00111121 1112345789999998777654
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.12 E-value=0.048 Score=40.64 Aligned_cols=153 Identities=15% Similarity=0.106 Sum_probs=72.8
Q ss_pred CCCEEEEeeCC------CeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC----------CCcEEEEEccCC
Q psy11036 54 SSDIVISGSYD------KTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG----------GLDVCIWDMLGG 115 (239)
Q Consensus 54 ~~~~l~s~~~d------g~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~----------~~~i~~~d~~~~ 115 (239)
++.+++.|+.+ ..+.+||..+.+....- .....-.+++. -++++++.|+ ...+.+||+. .
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~-~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPA-T 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETT-T
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCC-C
Confidence 56777888765 46889998877543321 11111112222 2667777776 1337889986 3
Q ss_pred CeEEEEEeccC---CceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCE-EEEEEecccCcE
Q psy11036 116 GKLLHKFTCHH---KTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK-LLHKFTCHHKTV 191 (239)
Q Consensus 116 ~~~~~~~~~~~---~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~h~~~v 191 (239)
.+ ...+.... ..-..+.+ +++.++.|+.++.-. ..++.+||+.+..- .+..+.......
T Consensus 179 ~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~--------------~~~~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 179 ET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGG--------------LDNVEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEE--------------BCCEEEEETTTTEEEECCCCSCCBSCC
T ss_pred Ce-EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCC--------------CceEEEeeCCCCcEEECCCCCCCccce
Confidence 32 23332111 11122222 556666666543200 01233444333211 111111111112
Q ss_pred EEEEEccCCCeEEEEcCC-----ceEEEEEccCC--eeeEEec
Q psy11036 192 TSLCLASGGKRLISASLD-----HHAKIYEMVNF--SPVHTLD 227 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~--~~~~~~~ 227 (239)
..+.+ ++++++.|+.+ ..+.+||..+. +.+..+.
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 22233 67777878744 46899999774 3444444
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.85 E-value=0.096 Score=39.63 Aligned_cols=147 Identities=8% Similarity=-0.035 Sum_probs=78.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec-----CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-----HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~ 117 (239)
..+.++.+.+ .+..+++ +.+|.| +.....++.-.... ....+.++.+.+ +..++++..+.|. .....++
T Consensus 36 ~~~~~v~~~~-~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~--~S~DgG~ 109 (327)
T 2xbg_A 36 ATILDMSFID-RHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIML--HTTDGGQ 109 (327)
T ss_dssp SCEEEEEESS-SSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEE--EESSTTS
T ss_pred CcEEEEEECC-CCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEE--EECCCCC
Confidence 6799999976 5666664 566765 33444444322221 234688999986 5555555456443 3332344
Q ss_pred EEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE
Q psy11036 118 LLHKFT---CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194 (239)
Q Consensus 118 ~~~~~~---~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~ 194 (239)
.-.... .+...+..+.+.+++..++++ .++.|.. .. .....-......+...+..+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~--S~------------------DgG~tW~~~~~~~~~~~~~~ 168 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR--TK------------------DSGKNWQALVQEAIGVMRNL 168 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE--ES------------------STTSSEEEEECSCCCCEEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE--Ec------------------CCCCCCEEeecCCCcceEEE
Confidence 333322 123456777777666655554 4554321 11 00111111122345568889
Q ss_pred EEccCCCeEEEEcCCceEEEEE
Q psy11036 195 CLASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 195 ~~s~~~~~l~s~s~d~~i~iwd 216 (239)
.+.|++.+++.+...+..+-.|
T Consensus 169 ~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EECTTSCEEEEETTSSEEEEEC
T ss_pred EEcCCCcEEEEECCCcEEEEeC
Confidence 9999988887775444444444
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.79 E-value=0.097 Score=38.84 Aligned_cols=162 Identities=15% Similarity=0.140 Sum_probs=82.9
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCCC---ceeee--cCCCCEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCCe
Q psy11036 54 SSDIVISGSYD-----KTVNVYDTRSPD---PVMSV--NHGSPVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGGK 117 (239)
Q Consensus 54 ~~~~l~s~~~d-----g~v~vw~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~~ 117 (239)
++.+++.|+.+ ..+.+||..+.+ ....- .....-.+++. .++..++.|+ + ..+.+||+. ..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPN-IDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETT-TTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCC-CCe
Confidence 56778888765 468899998776 33221 11111112222 2577777776 2 358889986 333
Q ss_pred EE--EEEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEEcccceEeee---------------------ec----
Q psy11036 118 LL--HKFTCHHKTVTSLCLASGGKRLISASLD-----HHAKIYEMTLKTVSSF---------------------TG---- 165 (239)
Q Consensus 118 ~~--~~~~~~~~~i~~i~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~---------------------~~---- 165 (239)
-. ..+......-..+.+ +++.++.|+.+ ..+.+||+....-..+ .|
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 22 222211112222222 66777777765 4578888752211111 11
Q ss_pred ---ceeEEEEEccCCCEE-EEEEecccCcEEEEEEccCCCeEEEEcCC-----ceEEEEEccCCe
Q psy11036 166 ---GLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLD-----HHAKIYEMVNFS 221 (239)
Q Consensus 166 ---~~~i~~~d~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~~ 221 (239)
..++.+||+.+..-. +..+.........+. -++++++.|+.+ ..+.+||+++.+
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 234788888764221 111111111112222 267777777654 468889987653
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.75 E-value=0.12 Score=39.51 Aligned_cols=98 Identities=10% Similarity=0.121 Sum_probs=60.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc--eeee----cCCCCEEEEEEecC---CcEEEEeC--C-----Cc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP--VMSV----NHGSPVESVLCLPS---GGIFVTGG--G-----LD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~----~~~~~v~~~~~~~~---~~~l~~~~--~-----~~ 106 (239)
.....++|.| +++++++ ..+|.|++++ +++. +..+ ........++++|+ +..++++. . +.
T Consensus 31 ~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 5577999999 6776555 5669999998 3332 1111 12457899999998 55555444 2 56
Q ss_pred EEEEEccCCCe------EEEEEec---cCCceEEEEEcCCCCEEEEEe
Q psy11036 107 VCIWDMLGGGK------LLHKFTC---HHKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 107 i~~~d~~~~~~------~~~~~~~---~~~~i~~i~~~~~~~~l~~~~ 145 (239)
|..++.. ... .+..+.. .......++|.|+|.+.++.+
T Consensus 107 v~r~~~~-~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHL-GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEC-SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeC-CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7778775 221 1122331 112336899999997666644
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.73 E-value=0.12 Score=39.10 Aligned_cols=146 Identities=8% Similarity=-0.008 Sum_probs=83.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeeec----CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN----HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL 118 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~ 118 (239)
..+.++.+.+ +..++ ++.++.|.. ....++.-.... .+..+..+.+.+++..++++.++.| |.....++.
T Consensus 80 ~~~~~i~~~~--~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v--~~S~DgG~t 153 (327)
T 2xbg_A 80 YRFNSVSFQG--NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAI--YRTKDSGKN 153 (327)
T ss_dssp CEEEEEEEET--TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCE--EEESSTTSS
T ss_pred ccEEEEEecC--CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccE--EEEcCCCCC
Confidence 4688999976 34444 455665543 333344333331 3356788888888887777766654 333323433
Q ss_pred EEEE-eccCCceEEEEEcCCCCEEEEEecCCeEE-EEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEE
Q psy11036 119 LHKF-TCHHKTVTSLCLASGGKRLISASLDHHAK-IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196 (239)
Q Consensus 119 ~~~~-~~~~~~i~~i~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~ 196 (239)
-... ......+..+.+.+++.+++.+. ++.+. -.|-.+. .-+.+ -......+..+.+
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~------------------tW~~~--~~~~~~~~~~~~~ 212 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQT------------------AWEPH--NRTTSRRLHNMGF 212 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCS------------------SCEEE--ECCSSSCEEEEEE
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCC------------------ceeEC--CCCCCCccceeEE
Confidence 3332 34456788999999888776664 44433 2221100 11111 1233456888889
Q ss_pred ccCCCeEEEEcCCceEEEEE
Q psy11036 197 ASGGKRLISASLDHHAKIYE 216 (239)
Q Consensus 197 s~~~~~l~s~s~d~~i~iwd 216 (239)
.+++++++.+ .+|.+++.+
T Consensus 213 ~~~g~~~~~~-~~G~~~~s~ 231 (327)
T 2xbg_A 213 TPDGRLWMIV-NGGKIAFSD 231 (327)
T ss_dssp CTTSCEEEEE-TTTEEEEEE
T ss_pred CCCCCEEEEe-CCceEEEec
Confidence 9988766544 578777764
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.68 E-value=0.12 Score=38.41 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=49.5
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-C-------CcEEEEEccCCCeE
Q psy11036 54 SSDIVISGSYDK-----TVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-G-------LDVCIWDMLGGGKL 118 (239)
Q Consensus 54 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~-------~~i~~~d~~~~~~~ 118 (239)
++.+++.|+.++ .+.+||+.+.+....- .....-.+++. -+++.++.|+ + ..+.+||+. ..+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~- 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNAT-TNE- 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETT-TTE-
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCC-CCc-
Confidence 567777787653 5778898776543321 21111112222 2567777766 2 347889986 332
Q ss_pred EEEEec---cCCceEEEEEcCCCCEEEEEecCC-----eEEEEEcc
Q psy11036 119 LHKFTC---HHKTVTSLCLASGGKRLISASLDH-----HAKIYEMT 156 (239)
Q Consensus 119 ~~~~~~---~~~~i~~i~~~~~~~~l~~~~~d~-----~i~i~d~~ 156 (239)
...+.. .......+.+ +++.++.|+.++ .+.+||+.
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCC
Confidence 222221 1111122222 566777776543 34455544
No 314
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.043 Score=41.77 Aligned_cols=197 Identities=9% Similarity=0.012 Sum_probs=101.9
Q ss_pred CCCCEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEE--ecCCCCEEEEe-eCCCeEEEEeCCCCCceeee
Q psy11036 5 LPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV--SPVSSDIVISG-SYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 5 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~-~~dg~v~vw~~~~~~~~~~~ 81 (239)
..||.|+-.|.++|+....++.... .++....- .+.++..++.. +.||.|..++..+|.....+
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~~~-------------~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPENF-------------QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGGGS-------------CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCCcc-------------CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 3589999999999999988876410 11111100 01123444443 68999999998887544433
Q ss_pred c-----CCCCEEE---EEE-e----cCCcEEEEeC-CCcEEEEEccCCCeEEEEEeccCC--c-----eEEEEEc-----
Q psy11036 82 N-----HGSPVES---VLC-L----PSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK--T-----VTSLCLA----- 135 (239)
Q Consensus 82 ~-----~~~~v~~---~~~-~----~~~~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~--~-----i~~i~~~----- 135 (239)
. ...++.. ... . ..+..+++++ ++.+.-.|++ +++.+.++..... . ..|....
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~-tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d 162 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML-NGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQ 162 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETT-TCCEEEEESTTCBCC------------------
T ss_pred ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECC-CCcEEEEEecCCCcccccccccccccccccccc
Confidence 2 2223321 000 0 0344566666 7999999998 8888887763211 0 0111111
Q ss_pred CCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCc--E-EEEEEccCCCeEEEEcCCceE
Q psy11036 136 SGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKT--V-TSLCLASGGKRLISASLDHHA 212 (239)
Q Consensus 136 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~--v-~~~~~s~~~~~l~s~s~d~~i 212 (239)
..+..++.+..+..+.+.+-.+ . +|+.. .......... + ..-..+.|+.++ .++.||.|
T Consensus 163 ~~~~~v~ig~~~y~v~~~~~sG----------~--~W~~~-----~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v 224 (339)
T 2be1_A 163 ECENMIVIGKTIFELGIHSYDG----------A--SYNVT-----YSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSL 224 (339)
T ss_dssp --CCEEEEEEEEEECEECCTTS----------C--CCCCE-----EEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEE
T ss_pred cCCCeEEEecceEEEEEECCCC----------C--eEEEe-----cccccccccccccccccccccCCcEE-EECCCCEE
Confidence 1124555555555554443111 0 22211 1111111100 0 000112346664 47789999
Q ss_pred EEEEccCCeeeE-EecCCCCee
Q psy11036 213 KIYEMVNFSPVH-TLDYPSPVL 233 (239)
Q Consensus 213 ~iwd~~~~~~~~-~~~~~~~v~ 233 (239)
.-+|..+|+.+. +.+..+++.
T Consensus 225 ~A~d~~~G~~~W~~~~l~sPv~ 246 (339)
T 2be1_A 225 LASDLDFRIARWVSPTFPGIIV 246 (339)
T ss_dssp EEECSTTCCEEEECCCCSSCEE
T ss_pred EEEECCCCcEEEEeecCCCCeE
Confidence 999999999887 555666654
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.64 E-value=0.018 Score=40.85 Aligned_cols=140 Identities=6% Similarity=-0.062 Sum_probs=77.2
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCC------ceeeecC--CCCEEEEEEecCCcEEEEeCCCcEEEEEccCCC-----eEEE
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPD------PVMSVNH--GSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG-----KLLH 120 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~------~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~-----~~~~ 120 (239)
.+.+|.....| +++.=....+. ...++.. =..+..++|+|+|.+.++ .+|.+.-.+..... ..-.
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCE
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCccccccccc
Confidence 34566666777 77666655554 2233333 246789999999987777 76765554443100 1111
Q ss_pred EEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc
Q psy11036 121 KFT--CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198 (239)
Q Consensus 121 ~~~--~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~ 198 (239)
.+- +-. .-..+.|.|+|.+.++ .||.|+-++-....-....+ ....+ -..-=..+..|.|.|
T Consensus 81 ~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~-----------~a~~v--g~~gw~~~~~lff~p 144 (236)
T 1tl2_A 81 KIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIA-----------RATEV--GSGGWSGFKFLFFHP 144 (236)
T ss_dssp EEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-----------HSEEE--ECSSGGGEEEEEECT
T ss_pred Eecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceec-----------cccEe--ccCCCCceEEEEECC
Confidence 111 111 2478899999987777 56888766543000000000 00111 011114578899999
Q ss_pred CCCeEEEEcCCceEE
Q psy11036 199 GGKRLISASLDHHAK 213 (239)
Q Consensus 199 ~~~~l~s~s~d~~i~ 213 (239)
+|.+.+.. |+.++
T Consensus 145 ~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 145 NGYLYAVH--GQQFY 157 (236)
T ss_dssp TSCEEEEE--TTEEE
T ss_pred CceEEEEe--CCcEE
Confidence 99877766 66654
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.63 E-value=0.15 Score=38.98 Aligned_cols=103 Identities=7% Similarity=-0.003 Sum_probs=63.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce--eee-----cCCCCEEEEEEecC---CcEEEEe----CCCcEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV--MSV-----NHGSPVESVLCLPS---GGIFVTG----GGLDVC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~--~~~-----~~~~~v~~~~~~~~---~~~l~~~----~~~~i~ 108 (239)
.....++|.| ++.++++--..|.|++++..+++.. ..+ ........|+++|+ +..|++. .++.|.
T Consensus 32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 6678999999 7887777655899999987655532 112 23567899999995 3344432 245566
Q ss_pred EEEccCC---------CeEE-EEEec-cCCceEEEEEcCCCCEEEEEec
Q psy11036 109 IWDMLGG---------GKLL-HKFTC-HHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 109 ~~d~~~~---------~~~~-~~~~~-~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
-|.+... .+.+ ..+.. ....-..|.|.|||.+.++.+.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 6665421 1112 22321 1123457999999987777554
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.60 E-value=0.16 Score=38.95 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=89.1
Q ss_pred CeEEEEEecCCCCEEEEe------------eCCCeEEEEeCCCCC-ceeee---c-----CCCCEEEEEEec--CCc-EE
Q psy11036 44 YVRAGTVSPVSSDIVISG------------SYDKTVNVYDTRSPD-PVMSV---N-----HGSPVESVLCLP--SGG-IF 99 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~------------~~dg~v~vw~~~~~~-~~~~~---~-----~~~~v~~~~~~~--~~~-~l 99 (239)
....++..| ++..++++ ..+|.|.++|..+.. ....+ + .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345677777 56555544 168999999987432 12222 1 123677888766 343 44
Q ss_pred EEeC----CCcEEEEEccCCCeEEE---EEecc-CCceEEEEEcCCCCEEEEEec---CCeEEEEEcccceEeeeeccee
Q psy11036 100 VTGG----GLDVCIWDMLGGGKLLH---KFTCH-HKTVTSLCLASGGKRLISASL---DHHAKIYEMTLKTVSSFTGGLD 168 (239)
Q Consensus 100 ~~~~----~~~i~~~d~~~~~~~~~---~~~~~-~~~i~~i~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~ 168 (239)
+++. +..+.+|++...+.... .+.+. -...+.+.+.++|.+.++... |.....++.. .-...+.
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~-----~~~~~g~ 204 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMH-----LGLAWSF 204 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHH-----TTCCCEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhh-----ccCCccE
Confidence 4443 36788888764333322 23221 235788999999887766531 1000000000 0001223
Q ss_pred EEEEEccCCCEEEEEEecccCcEEEEEEccCCCeEEEE-cCCceEEEEEcc
Q psy11036 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA-SLDHHAKIYEMV 218 (239)
Q Consensus 169 i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~d~~i~iwd~~ 218 (239)
+.-+|.. +. ..+...-..-..++|+||++.|..+ +..+.|..|++.
T Consensus 205 vyr~d~~---~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 205 VTYYSPN---DV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEECTT---CC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECC---eE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 4444432 11 1122223446789999999877655 567899999985
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.59 E-value=0.14 Score=38.26 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=45.8
Q ss_pred CCCEEEEeeCC--------CeEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeCC-------CcEEEEEccCCC
Q psy11036 54 SSDIVISGSYD--------KTVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGGG-------LDVCIWDMLGGG 116 (239)
Q Consensus 54 ~~~~l~s~~~d--------g~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-------~~i~~~d~~~~~ 116 (239)
++.+++.|+.+ ..+.+||..+.+.... +.....-.+++. -+++.++.|+. ..+.+||+. +.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPK-KF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETT-TT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCC-CC
Confidence 56777777743 4588999887653322 111111112222 35667777662 458899987 33
Q ss_pred eEEEEEec---cCCceEEEEEcCCCCEEEEEecCC
Q psy11036 117 KLLHKFTC---HHKTVTSLCLASGGKRLISASLDH 148 (239)
Q Consensus 117 ~~~~~~~~---~~~~i~~i~~~~~~~~l~~~~~d~ 148 (239)
+ -..+.. ....-..+.+ +++.++.|+.++
T Consensus 176 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 207 (315)
T 4asc_A 176 E-WKELAPMQTARSLFGATVH--DGRIIVAAGVTD 207 (315)
T ss_dssp E-EEECCCCSSCCBSCEEEEE--TTEEEEEEEECS
T ss_pred e-EEECCCCCCchhceEEEEE--CCEEEEEeccCC
Confidence 2 222221 1111122222 566777777654
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.51 E-value=0.16 Score=37.78 Aligned_cols=58 Identities=16% Similarity=0.256 Sum_probs=35.0
Q ss_pred CCCEEEEeeCC----CeEEEEeCCCCCceeee--cCC-CCEEEEEEecCCcEEEEeC-C------CcEEEEEcc
Q psy11036 54 SSDIVISGSYD----KTVNVYDTRSPDPVMSV--NHG-SPVESVLCLPSGGIFVTGG-G------LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~d----g~v~vw~~~~~~~~~~~--~~~-~~v~~~~~~~~~~~l~~~~-~------~~i~~~d~~ 113 (239)
++.+++.|+.+ ..+.+||..+.+....- ... .....+. -++++++.|+ + ..+.+||+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 56788888765 67889998877543322 211 1122222 2567777776 3 458889987
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.38 E-value=0.21 Score=37.81 Aligned_cols=191 Identities=12% Similarity=0.068 Sum_probs=113.2
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeeec----
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSVN---- 82 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~---- 82 (239)
..+.++|+++.+.++.+.-. +.|.-=.|-. .+.|+--+. ..|+-|++.. ..+.+.+.
T Consensus 87 ~~LQiFnletK~klks~~~~---------------e~VvfWkWis--~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 87 KTLQIFNIEMKSKMKAHTMT---------------DDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp TEEEEEETTTTEEEEEEECS---------------SCEEEEEECS--SSEEEEEES-SEEEEEESSTTCCCEEEEECCGG
T ss_pred CeEEEechHHhhhhcceecC---------------CccEEEEecC--CCeEEEEcC-CcEEEEcccCCCCCceeeecchh
Confidence 57888888887777776665 4566666654 445444433 5799999974 34555552
Q ss_pred -CCCCEEEEEEecCCcEEEEeC----C----CcEEEEEccCCCeEEEEEeccCCceEEEEEcCC---CCEEEEEec---C
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG----G----LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG---GKRLISASL---D 147 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~----~----~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~l~~~~~---d 147 (239)
....|.....+++.++++..+ + |.+.+|..+ .+..+.+.+|...-..+.+..+ ...++.+.. .
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 245678888889999887665 2 678899985 5666777777665444433211 123333333 2
Q ss_pred CeEEEEEcc-c--------c--------------------------eEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 148 HHAKIYEMT-L--------K--------------------------TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 148 ~~i~i~d~~-~--------~--------------------------~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
+.++|.++. . + .+.-++..+-+.+||+++ +.++..-+-....|.
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIF 305 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEE
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc-CcEEEEeccCCCceE
Confidence 577777774 1 1 111125566689999987 455554444455555
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
..+.+.+..=++.....|.|.--.+..
T Consensus 306 ~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 306 VTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred EecccCCCCcEEEEcCCCEEEEEEECc
Confidence 444443333333344566655554443
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.38 E-value=0.27 Score=39.10 Aligned_cols=103 Identities=10% Similarity=-0.003 Sum_probs=61.1
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee--eec-------CCCCEEEEEEecC---CcEEEEeC-C-----
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM--SVN-------HGSPVESVLCLPS---GGIFVTGG-G----- 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~--~~~-------~~~~v~~~~~~~~---~~~l~~~~-~----- 104 (239)
.....++|.| +++++++-...+.|++++..+++... .+. ....+..|+++|+ +..|+++. .
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 5677999999 78877765444578888865554322 221 2456789999995 44444433 1
Q ss_pred --------CcEEEEEccCCC------eEE-EEEec-cCCceEEEEEcCCCCEEEEEec
Q psy11036 105 --------LDVCIWDMLGGG------KLL-HKFTC-HHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 105 --------~~i~~~d~~~~~------~~~-~~~~~-~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
..|.-+++.... +.+ ..+.. .......|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 245555543211 111 11221 1234688999999987776554
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.25 E-value=0.23 Score=36.99 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=49.7
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCCCceee--ecCC-CCEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCCeEE
Q psy11036 54 SSDIVISGSYD-----KTVNVYDTRSPDPVMS--VNHG-SPVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGGKLL 119 (239)
Q Consensus 54 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~~~~ 119 (239)
++.+++.|+.+ ..+.+||..+.+.... +... ....++.+ ++.+++.|+ + ..+.+||+. ..+ .
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~-~~~-W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPE-RNE-W 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT-TTE-E
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCC-CCe-E
Confidence 56777777654 3588899887653322 1111 11222222 567777776 2 458889986 332 2
Q ss_pred EEEec---cCCceEEEEEcCCCCEEEEEecC-----CeEEEEEcc
Q psy11036 120 HKFTC---HHKTVTSLCLASGGKRLISASLD-----HHAKIYEMT 156 (239)
Q Consensus 120 ~~~~~---~~~~i~~i~~~~~~~~l~~~~~d-----~~i~i~d~~ 156 (239)
..+.. .......+.+ +++.++.|+.+ ..+.+||+.
T Consensus 197 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCC
Confidence 22221 1111222222 56667777654 335555554
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.25 E-value=0.23 Score=36.97 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=33.7
Q ss_pred CCCEEEEeeC----C-----CeEEEEeCCCCCceee--ecC-CCCEEEEEEecCCcEEEEeC-C-----CcEEEEEcc
Q psy11036 54 SSDIVISGSY----D-----KTVNVYDTRSPDPVMS--VNH-GSPVESVLCLPSGGIFVTGG-G-----LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~----d-----g~v~vw~~~~~~~~~~--~~~-~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~ 113 (239)
++.+++.|+. + ..+.+||..+.+.... +.. ......+.+ ++++++.|+ + ..+.+||+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCC
Confidence 5677777776 2 3588899887653322 111 112222222 677777776 2 468889986
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.21 E-value=0.24 Score=36.73 Aligned_cols=59 Identities=15% Similarity=0.262 Sum_probs=33.4
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEeC-C-----CcEEEEEcc
Q psy11036 54 SSDIVISGSYDK-----TVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGG-G-----LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~ 113 (239)
++.+++.|+.++ .+.+||..+.+....- .....-.+++. -++..++.|+ + ..+.+||+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~ 132 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIK 132 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCC
Confidence 567888887653 5888998876533221 11111112222 2567777776 3 247788886
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.12 E-value=0.28 Score=36.70 Aligned_cols=82 Identities=7% Similarity=0.035 Sum_probs=47.7
Q ss_pred CeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeC---CC--cEEEEEccCCCeEEEEEeccCCceEEEEEcCCCC
Q psy11036 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG---GL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 139 (239)
Q Consensus 65 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~--~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 139 (239)
..|+..++...+....... . +..+++++..|+-.. ++ .|...++. +.....+..+.. .+++++++
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRID--GEEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp EEEEEEETTSCCCEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETT--SCCCEEEESSCC----CCSEEETT
T ss_pred CeEEEEeCCCCcceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECC--CCCeEEEeCCCc----eEeeEECC
Confidence 4677778776654332222 1 236777888887654 34 45555554 444445554433 45677888
Q ss_pred EEEEEec-CCeEEEEEcc
Q psy11036 140 RLISASL-DHHAKIYEMT 156 (239)
Q Consensus 140 ~l~~~~~-d~~i~i~d~~ 156 (239)
.|.-.+. ...|...++.
T Consensus 158 ~iy~t~~g~~~Iy~~~l~ 175 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTA 175 (302)
T ss_dssp EEEEECTTTCCEEEEETT
T ss_pred EEEEEeCCCceEEEEECC
Confidence 8776654 5677777766
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.09 E-value=0.12 Score=42.10 Aligned_cols=134 Identities=14% Similarity=0.158 Sum_probs=79.6
Q ss_pred cCCCCEEEEEEecCCcEEEEeC--CCcEEEEEccCC-----Ce-------EEEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy11036 82 NHGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGG-----GK-------LLHKFTCHHKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 82 ~~~~~v~~~~~~~~~~~l~~~~--~~~i~~~d~~~~-----~~-------~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d 147 (239)
+.......+..+|+|+++++++ +.++.++|.+.- .+ ....... .-.....+|.++|....+.-.|
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTT
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeec
Confidence 3444556788999999999998 799999998721 11 1233332 2344678999999666666689
Q ss_pred CeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEE-----EEccCCCeEEEEc---CCce--------
Q psy11036 148 HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL-----CLASGGKRLISAS---LDHH-------- 211 (239)
Q Consensus 148 ~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~-----~~s~~~~~l~s~s---~d~~-------- 211 (239)
..|.-|++... +..+.|. .....+..+.-|-++-.-. .-.|+|++|++.. .|..
T Consensus 399 SqvvkWni~~a-~~~~~g~---------~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~p 468 (638)
T 3sbq_A 399 SQVVKWNMEEA-VRAYKGE---------KVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHP 468 (638)
T ss_dssp TEEEEEEHHHH-HHHHTTC---------CCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCC
T ss_pred ceEEEEeccHH-HHHhcCc---------cCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCC
Confidence 99999998710 0001010 0123444455554433222 1257888888874 4543
Q ss_pred --EEEEEccC--CeeeEEe
Q psy11036 212 --AKIYEMVN--FSPVHTL 226 (239)
Q Consensus 212 --i~iwd~~~--~~~~~~~ 226 (239)
-.+.|+.. .+++...
T Consensus 469 en~QlidIsGdkM~lv~D~ 487 (638)
T 3sbq_A 469 ENDQLIDISGDEMKLVHDG 487 (638)
T ss_dssp EEEEEEECSSSSCEEEEEE
T ss_pred CcceeEecCCCceEEEecC
Confidence 47777743 3444433
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.06 E-value=0.27 Score=37.61 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=34.2
Q ss_pred CCEEEEEEecCCc-EEEEeCCCcEEEEEccCCCeEEEE---E----eccCCceEEEEEcCC
Q psy11036 85 SPVESVLCLPSGG-IFVTGGGLDVCIWDMLGGGKLLHK---F----TCHHKTVTSLCLASG 137 (239)
Q Consensus 85 ~~v~~~~~~~~~~-~l~~~~~~~i~~~d~~~~~~~~~~---~----~~~~~~i~~i~~~~~ 137 (239)
.....|+|.|+|+ ++++-..|.|.+++.. +..... + .........|+++|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCC
Confidence 3567999999999 7776668999988853 322111 1 112345689999995
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.98 E-value=0.37 Score=36.89 Aligned_cols=101 Identities=10% Similarity=-0.019 Sum_probs=59.7
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeee----cCCCCEEEEEEecC---CcEEEEeC-----C----C
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD-PVMSV----NHGSPVESVLCLPS---GGIFVTGG-----G----L 105 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-~~~~~----~~~~~v~~~~~~~~---~~~l~~~~-----~----~ 105 (239)
.....++|.| +++++++ ..+|.|++++ .+++ .+..+ ........++++|+ +..|+++. + +
T Consensus 29 ~~P~~ia~~p-dG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 5678999999 6765554 5669999997 3443 22221 12356889999997 44444432 2 5
Q ss_pred cEEEEEccCC------CeE-EEEEec-cCCceEEEEEcCCCCEEEEEec
Q psy11036 106 DVCIWDMLGG------GKL-LHKFTC-HHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 106 ~i~~~d~~~~------~~~-~~~~~~-~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
.|..++.... .+. +..+.. .......++|.|||.+.++.+.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 6777776522 111 112221 1113467999999987766543
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.96 E-value=0.38 Score=36.81 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=57.1
Q ss_pred CCeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCc---eeee-----cCCCCEEEEEEecC---CcEEEEeC-C-----
Q psy11036 43 DYVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSPDP---VMSV-----NHGSPVESVLCLPS---GGIFVTGG-G----- 104 (239)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~~~---~~~~-----~~~~~v~~~~~~~~---~~~l~~~~-~----- 104 (239)
.....++|.| +++ +++ +...|.|++++.. ++. +..+ ........++++|+ +..++++. .
T Consensus 18 ~~P~~i~~~p-dG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECS-TTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcC-CCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 5578999999 777 555 4567999999853 221 1111 12346789999995 44444442 1
Q ss_pred ---CcEEEEEccCCC-e--EEEE-Eec------cCCceEEEEEcCCCCEEEEEec
Q psy11036 105 ---LDVCIWDMLGGG-K--LLHK-FTC------HHKTVTSLCLASGGKRLISASL 146 (239)
Q Consensus 105 ---~~i~~~d~~~~~-~--~~~~-~~~------~~~~i~~i~~~~~~~~l~~~~~ 146 (239)
..|..+++.... . .... +.. ....-..++|.|||.+.++.+.
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 245556664221 1 1111 111 1112357999999976665443
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.89 E-value=0.48 Score=37.44 Aligned_cols=191 Identities=12% Similarity=0.077 Sum_probs=113.2
Q ss_pred CEEEEeeCCCcceeeeeeCCceeeccceeeccCCCCCeEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeeec----
Q psy11036 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRS-PDPVMSVN---- 82 (239)
Q Consensus 8 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~-~~~~~~~~---- 82 (239)
..+.|+|+++.+.++.+.-. ..|.-=.|-. .+.|+-.+ +..|+-|++.. ..+++.+.
T Consensus 86 ~~lQiFnle~K~klks~~~~---------------e~VvfWkWis--~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 86 KTLQIFNIEMKSKMKAHTMT---------------DDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp TEEEEEETTTTEEEEEEECS---------------SCCCEEEEEE--TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGG
T ss_pred CeEEEEchHHhhhhcceecC---------------CCceEEEecC--CCeEEEEc-CCeeEEecccCCCCchhheecchh
Confidence 56777777777777666655 3455555554 34444333 35799999974 34555552
Q ss_pred -CCCCEEEEEEecCCcEEEEeC--------CCcEEEEEccCCCeEEEEEeccCCceEEEEEcCCC---CEEEEEecC---
Q psy11036 83 -HGSPVESVLCLPSGGIFVTGG--------GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG---KRLISASLD--- 147 (239)
Q Consensus 83 -~~~~v~~~~~~~~~~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~~~~---~~l~~~~~d--- 147 (239)
....|.....+++.++++..+ .|.+.+|..+ .+..+.+.+|......+.+..+. ..++.+...
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 245778888899999888665 2678899985 55666777776655444442211 234444332
Q ss_pred CeEEEEEcc-c--------c--------------------------eEeeeecceeEEEEEccCCCEEEEEEecccCcEE
Q psy11036 148 HHAKIYEMT-L--------K--------------------------TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVT 192 (239)
Q Consensus 148 ~~i~i~d~~-~--------~--------------------------~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~ 192 (239)
+.++|.++. . + .+..++..+-+.+||+.+ +.++..-+-....|.
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIF 304 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccc-ceeeeeecccCCceE
Confidence 677777774 1 0 111225566689999987 455544444455555
Q ss_pred EEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 193 SLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 193 ~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
..+.+....=++.....|.|.--.+..
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred EecccCCCCcEEEEccCceEEEEEEcc
Confidence 544444433344444666665554443
No 331
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.59 E-value=0.56 Score=35.99 Aligned_cols=172 Identities=12% Similarity=0.156 Sum_probs=94.4
Q ss_pred CCCEEEEeeCCCcc-eeeee--eCCceeeccceeeccCCCCCeEEEEEecC-CCC--EEEEeeC--CCeEEEEeCCCCCc
Q psy11036 6 PILIVALWDIPSEA-QVSTF--TNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSD--IVISGSY--DKTVNVYDTRSPDP 77 (239)
Q Consensus 6 ~dg~i~vwd~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~--~l~s~~~--dg~v~vw~~~~~~~ 77 (239)
.+|.|.++|.++.. ....+ .+.. +....-....+.+.++ ++. ++++-.. +.++.+|++.....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~---------~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~ 151 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNT---------LDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK 151 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSS---------CCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT
T ss_pred CCCeEEEEecCCCCCceEEEEccCCC---------CCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC
Confidence 57999999987321 12222 2210 0001135677777662 232 3444222 56788888765432
Q ss_pred ee----eec--CCCCEEEEEEecCCcEEEEeC----C------------CcEEEEEccCCCeEEEEEeccCCceEEEEEc
Q psy11036 78 VM----SVN--HGSPVESVLCLPSGGIFVTGG----G------------LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 135 (239)
Q Consensus 78 ~~----~~~--~~~~v~~~~~~~~~~~l~~~~----~------------~~i~~~d~~~~~~~~~~~~~~~~~i~~i~~~ 135 (239)
.. .+. .-...+.+.+.++|.+.++.. + ..=.+|.+. .++ ...+...-...+.++|+
T Consensus 152 ~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d-~~~-~~~~~~~l~~pNGia~s 229 (355)
T 3sre_A 152 SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS-PND-VRVVAEGFDFANGINIS 229 (355)
T ss_dssp EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC-TTC-CEEEEEEESSEEEEEEC
T ss_pred EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE-CCe-EEEeecCCcccCcceEC
Confidence 22 222 234678999999998877654 1 122344443 232 22222233456899999
Q ss_pred CCCCEEEEEe-cCCeEEEEEccc-ceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEcc-CCCeEEEEc
Q psy11036 136 SGGKRLISAS-LDHHAKIYEMTL-KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS-GGKRLISAS 207 (239)
Q Consensus 136 ~~~~~l~~~~-~d~~i~i~d~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s 207 (239)
||++.|..+. ..+.|..|+++. ..+. ....+. ..+..-.+++.+ +|++.+++.
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~~g~l~------------------~~~~~~-~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHANWTLT------------------PLRVLS-FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEE------------------EEEEEE-CSSEEEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEECCCCcEe------------------cCEEEe-CCCCCceEEEeCCCCcEEEEec
Confidence 9998777665 467888888761 1110 011111 134566788888 588777554
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.39 E-value=0.58 Score=34.94 Aligned_cols=59 Identities=24% Similarity=0.296 Sum_probs=33.6
Q ss_pred CCCEEEEeeCC-------CeEEEEeCCCCCceeeecCCCCE--EEEEEecCCcEEEEeC--C-----CcEEEEEcc
Q psy11036 54 SSDIVISGSYD-------KTVNVYDTRSPDPVMSVNHGSPV--ESVLCLPSGGIFVTGG--G-----LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~--~-----~~i~~~d~~ 113 (239)
++.+++.|+.+ ..+.+||..+.+....-..+.+. .+++. .++++++.|+ + ..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 56777777764 25788888876543321111111 11222 4677777776 1 358899987
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.99 E-value=0.85 Score=34.62 Aligned_cols=30 Identities=7% Similarity=-0.119 Sum_probs=18.9
Q ss_pred cCCCeEEEEcCCc------eEEEEEccCCeeeEEec
Q psy11036 198 SGGKRLISASLDH------HAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 198 ~~~~~l~s~s~d~------~i~iwd~~~~~~~~~~~ 227 (239)
.++++++.|+.++ .|.++++++++.+...+
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 4677777777542 46667888877766544
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.39 E-value=2 Score=36.20 Aligned_cols=91 Identities=14% Similarity=0.253 Sum_probs=48.8
Q ss_pred CCCEEEEeeCCC------eEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeC-C--CcEEEEEccCCCeEEEEE
Q psy11036 54 SSDIVISGSYDK------TVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGG-G--LDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 54 ~~~~l~s~~~dg------~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~--~~i~~~d~~~~~~~~~~~ 122 (239)
++.+++.|+.++ .+.+||..+.+.... +.....-.+++...++..++.|+ + +.+.+||+. ... ...+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~-t~~-W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT-EEI-FKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETT-TTE-EEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECC-CCc-eEEc
Confidence 456777777543 577889887643322 11111112233324788888887 3 378999987 332 2222
Q ss_pred ec------cCCceEEEEEcCC-CCEEEEEec
Q psy11036 123 TC------HHKTVTSLCLASG-GKRLISASL 146 (239)
Q Consensus 123 ~~------~~~~i~~i~~~~~-~~~l~~~~~ 146 (239)
.. .......+.+..+ ++.++.|+.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCB
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCc
Confidence 21 1122233555544 566777765
No 335
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.20 E-value=3 Score=37.48 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=47.3
Q ss_pred CCeEEEEEecCC-----CCEEEEeeC-CCeEEEEeCCCCCceeee--cCCCCEEEEEEec--CCcEEEEeC-CCcEEEEE
Q psy11036 43 DYVRAGTVSPVS-----SDIVISGSY-DKTVNVYDTRSPDPVMSV--NHGSPVESVLCLP--SGGIFVTGG-GLDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~~-----~~~l~s~~~-dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~-~~~i~~~d 111 (239)
..|.|+++.|.. .++++.|.. |++++|+++.+.+.+... +......++.+.. ...++.+|- ||.+..+.
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 679999998632 368999986 999999999877665543 2233445554432 234555555 78876666
Q ss_pred cc
Q psy11036 112 ML 113 (239)
Q Consensus 112 ~~ 113 (239)
+.
T Consensus 634 ~d 635 (1158)
T 3ei3_A 634 LN 635 (1158)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.80 E-value=2.1 Score=39.31 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-Cceeee-cC----CCCEEEEEEecCCcEEEEeC--------CCcEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-DPVMSV-NH----GSPVESVLCLPSGGIFVTGG--------GLDVC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~--------~~~i~ 108 (239)
.+|.-=.|-. .+.|+-.+ +..|.-|++... .++..+ .| ...|..-..+++.++++..| .|.+.
T Consensus 106 e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQ 182 (1630)
T 1xi4_A 106 DDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQ 182 (1630)
T ss_pred CCceEEEecC--CCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceee
Confidence 3454445553 34443333 357999999643 444444 22 45677888889999888654 27788
Q ss_pred EEEccCCCeEEEEEeccCCceEEEE
Q psy11036 109 IWDMLGGGKLLHKFTCHHKTVTSLC 133 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~~~~~~i~~i~ 133 (239)
+|..+ .+..+.+.+|.+....+.
T Consensus 183 LyS~e--r~~sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 183 LYSVD--RKVSQPIEGHAASFAQFK 205 (1630)
T ss_pred eeecc--cccchhhhHhHhhhheec
Confidence 99885 444455556655443333
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.73 E-value=1.5 Score=32.30 Aligned_cols=88 Identities=23% Similarity=0.266 Sum_probs=46.6
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCCCceee--ecCCC-CEEEEEEecCCcEEEEeC-C-----CcEEEEEccCCCeEE
Q psy11036 54 SSDIVISGSYD-----KTVNVYDTRSPDPVMS--VNHGS-PVESVLCLPSGGIFVTGG-G-----LDVCIWDMLGGGKLL 119 (239)
Q Consensus 54 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~l~~~~-~-----~~i~~~d~~~~~~~~ 119 (239)
++.+++.|+.+ ..+.+||+.+.+.... +.... ...++. -++++++.|+ + ..+.+||+. ..+ .
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~-W 234 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIR-TDS-W 234 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETT-TTE-E
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCC-CCc-E
Confidence 56777887765 4588999887654332 11111 122222 2567777776 2 468899987 333 2
Q ss_pred EEEecc---CCceEEEEEcCCCCEEEEEecC
Q psy11036 120 HKFTCH---HKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 120 ~~~~~~---~~~i~~i~~~~~~~~l~~~~~d 147 (239)
..+... ......+.+ +++.++.|+.+
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--RGRLYAIAGYD 263 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred EECCCCCCcccceeEEEE--CCEEEEEcCcC
Confidence 222211 111122222 56667777655
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.59 E-value=0.55 Score=38.30 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=66.5
Q ss_pred CCeEEEEEecCCCCEE-EEeeCCCeEEEEeCCCC------Cc-------eeeecCCCCEEEEEEecCCcEEEEeC-CCcE
Q psy11036 43 DYVRAGTVSPVSSDIV-ISGSYDKTVNVYDTRSP------DP-------VMSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l-~s~~~dg~v~vw~~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i 107 (239)
.....+..+| +++++ ++|-.+.++.++|+++. +. ....+..-.....+|.++|....+-- |..|
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 4456889999 55554 55667889999998742 11 12223455678899999994444443 8999
Q ss_pred EEEEccCC---------CeEEEEEeccCCceEEEE-----EcCCCCEEEEEe
Q psy11036 108 CIWDMLGG---------GKLLHKFTCHHKTVTSLC-----LASGGKRLISAS 145 (239)
Q Consensus 108 ~~~d~~~~---------~~~~~~~~~~~~~i~~i~-----~~~~~~~l~~~~ 145 (239)
.-|++... ...+.++.-|-++-.-.+ -.|+|++|++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 99999731 246667766655433222 256888888865
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.52 E-value=2.3 Score=33.81 Aligned_cols=60 Identities=8% Similarity=0.097 Sum_probs=38.7
Q ss_pred CCCEEEEEEecCCcEEEEeCC-CcEEEEEccCCCeE--EEEEec------cCCceEEEEEcCC---CCEEEEE
Q psy11036 84 GSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKL--LHKFTC------HHKTVTSLCLASG---GKRLISA 144 (239)
Q Consensus 84 ~~~v~~~~~~~~~~~l~~~~~-~~i~~~d~~~~~~~--~~~~~~------~~~~i~~i~~~~~---~~~l~~~ 144 (239)
-.....|+|.|+|+++++-.. +.|.+++.. .+.. +..+.. .......|+|+|+ +..|...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE-SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC-CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 345679999999998888776 468888764 3332 222221 2456779999995 4444443
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.35 E-value=2.1 Score=32.74 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=38.0
Q ss_pred CCCCEEEEEEecCCcEEEEeC-CCcEEEEEccCCCeE--EEEE----eccCCceEEEEEcCC
Q psy11036 83 HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL--LHKF----TCHHKTVTSLCLASG 137 (239)
Q Consensus 83 ~~~~v~~~~~~~~~~~l~~~~-~~~i~~~d~~~~~~~--~~~~----~~~~~~i~~i~~~~~ 137 (239)
.-.....|+|.|+|.++++-. .|.|.+++.. .++. +..+ .........|+++|+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~-~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAK-TGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECC-CCcEeeecccCceeecCCCCceeeEeccc
Confidence 345678999999999888887 7999988764 3332 2212 123456789999995
No 341
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=93.08 E-value=1.9 Score=31.68 Aligned_cols=113 Identities=11% Similarity=0.056 Sum_probs=68.3
Q ss_pred CCCeEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCC----cee--eecCCCCEEEEEEecCC-cEEEEeCCCcEEEEEcc
Q psy11036 42 QDYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPD----PVM--SVNHGSPVESVLCLPSG-GIFVTGGGLDVCIWDML 113 (239)
Q Consensus 42 ~~~v~~~~~~~~-~~~~l~s~~~dg~v~vw~~~~~~----~~~--~~~~~~~v~~~~~~~~~-~~l~~~~~~~i~~~d~~ 113 (239)
.+.|..+.. ++ +...++..+.+|.++...+..-. -.. .+.....+..+...... ..++....|.+..++..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 356777644 42 35788889999999998865432 111 22344556555554444 45555557887777653
Q ss_pred C--------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 114 G--------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 114 ~--------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
. .+.....+.. ...|..+...+++..++..+..|.++...+.
T Consensus 146 eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp GSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred hCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1 1112222222 3456666555666788899999999888876
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.71 E-value=2.3 Score=31.58 Aligned_cols=59 Identities=20% Similarity=0.234 Sum_probs=32.3
Q ss_pred CCCEEEEeeC----C-------CeEEEEeCCCCCceeeecCCCCE--EEEEEecCCcEEEEeC-C--------CcEEEEE
Q psy11036 54 SSDIVISGSY----D-------KTVNVYDTRSPDPVMSVNHGSPV--ESVLCLPSGGIFVTGG-G--------LDVCIWD 111 (239)
Q Consensus 54 ~~~~l~s~~~----d-------g~v~vw~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~-~--------~~i~~~d 111 (239)
++.+++.|+. + ..+.+||..+.+....-..+.+- .+++.. ++..++.|+ + ..+.+||
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEEC
Confidence 6778888874 1 12778888876543221111111 122222 566666666 1 4588899
Q ss_pred cc
Q psy11036 112 ML 113 (239)
Q Consensus 112 ~~ 113 (239)
+.
T Consensus 124 ~~ 125 (315)
T 4asc_A 124 RL 125 (315)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.54 E-value=2.6 Score=31.86 Aligned_cols=49 Identities=20% Similarity=0.387 Sum_probs=27.6
Q ss_pred CCCEEEEeeC-C---------CeEEEEeCCCCCceeee--c-CCCCEEEEEEecCCcEEEEeC
Q psy11036 54 SSDIVISGSY-D---------KTVNVYDTRSPDPVMSV--N-HGSPVESVLCLPSGGIFVTGG 103 (239)
Q Consensus 54 ~~~~l~s~~~-d---------g~v~vw~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~ 103 (239)
++.+++.|+. + ..+.+||..+.+....- . ....-.++.. .++++++.|+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG 126 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGG 126 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEEC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeC
Confidence 5677777776 2 46889998876533321 1 1111122222 5677777777
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.70 E-value=3.1 Score=30.89 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=31.3
Q ss_pred CCCEEEEeeC----CC-------eEEEEeCCCCCceee--ecCCCCEEEEEEecCCcEEEEeC-C-------CcEEEEEc
Q psy11036 54 SSDIVISGSY----DK-------TVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGG-G-------LDVCIWDM 112 (239)
Q Consensus 54 ~~~~l~s~~~----dg-------~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~-------~~i~~~d~ 112 (239)
++.+++.|+. ++ .+.+||..+.+.... +.....-.+++.. ++..++.|+ + ..+.+||+
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeC
Confidence 6778888873 12 277888876654322 1111111222222 566666665 2 24778888
Q ss_pred c
Q psy11036 113 L 113 (239)
Q Consensus 113 ~ 113 (239)
.
T Consensus 135 ~ 135 (318)
T 2woz_A 135 V 135 (318)
T ss_dssp T
T ss_pred C
Confidence 6
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.20 E-value=6.3 Score=33.44 Aligned_cols=149 Identities=15% Similarity=0.145 Sum_probs=84.6
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-----cCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCe
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-----NHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGK 117 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~ 117 (239)
..|.++.. . ++ .|..++.+ -+..+|..+++..... .....|.++....++.+.+... +.+..++.. ..+
T Consensus 103 ~~i~~i~~-~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~-~~~ 176 (758)
T 3ott_A 103 TDVRTMAL-Q-GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPS-NGK 176 (758)
T ss_dssp SCEEEEEE-E-TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETT-TTE
T ss_pred ceEEEEEe-c-CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccC-CCc
Confidence 45777654 3 34 45556665 5888898766543220 1235688888888888777554 457778875 333
Q ss_pred EEEEEecc------CCceEEEEEcCCCCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEecccCcE
Q psy11036 118 LLHKFTCH------HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTV 191 (239)
Q Consensus 118 ~~~~~~~~------~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v 191 (239)
...+... ...|.++...+++..|..|+. +-+..+|.....+..+ ..+ ....|
T Consensus 177 -~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~------------------~~l--~~~~i 234 (758)
T 3ott_A 177 -FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQT------------------EAF--HNNSI 234 (758)
T ss_dssp -EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEE------------------EEE--EEEEE
T ss_pred -eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEec------------------cCC--CCCeE
Confidence 2222211 124788887777665555554 3466677652211111 111 12347
Q ss_pred EEEEEccCCCeEEEEcCCceEEEEEccCCe
Q psy11036 192 TSLCLASGGKRLISASLDHHAKIYEMVNFS 221 (239)
Q Consensus 192 ~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~ 221 (239)
.++....+|.+.+.. .+ -+.+++..+++
T Consensus 235 ~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 235 KSLALDGNGDLLAGT-DN-GLYVYHNDTTP 262 (758)
T ss_dssp EEEEECTTCCEEEEE-TT-EEEEECCTTSC
T ss_pred EEEEEcCCCCEEEEe-CC-ceeEEecCCCc
Confidence 778777777765543 44 47777776543
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.07 E-value=1.3 Score=33.69 Aligned_cols=116 Identities=8% Similarity=0.005 Sum_probs=63.8
Q ss_pred CcEEEEeCCCcEEEEEccCCCeEEEEEecc-CCceEEEEEc--C-CCCEEEEE-ecCCeEEEEEcc-cceEeeeecceeE
Q psy11036 96 GGIFVTGGGLDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLA--S-GGKRLISA-SLDHHAKIYEMT-LKTVSSFTGGLDV 169 (239)
Q Consensus 96 ~~~l~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~i~~~--~-~~~~l~~~-~~d~~i~i~d~~-~~~~~~~~~~~~i 169 (239)
+..++...||.|.-.|.. +++..-+++.. ..++....-. + ++..++.. +.||.+..++.. +..
T Consensus 11 ~~V~v~t~dG~l~Ald~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~---------- 79 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRR-NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ---------- 79 (339)
T ss_dssp EEEEEEETTSCEEEEETT-TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE----------
T ss_pred CEEEEEeCCCeEEEEECC-CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE----------
Confidence 334444448999999987 78877777643 1232221100 1 22333333 578988888876 211
Q ss_pred EEEEccCCCEEEEEEecccCcEEE---EEE-----ccCCCeEEEEcCCceEEEEEccCCeeeEEecCC
Q psy11036 170 CIWDMLGGGKLLHKFTCHHKTVTS---LCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP 229 (239)
Q Consensus 170 ~~~d~~~~~~~~~~~~~h~~~v~~---~~~-----s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 229 (239)
.|.... ... ....++.. ... +..+..+++|+.+|++...|+.+|+.+.++...
T Consensus 80 -~~~~~~-~~l-----v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 80 -KLPLSI-RQL-----VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp -EEEEEH-HHH-----HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred -Eeeecc-ccc-----eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 111100 000 01111211 000 013567888999999999999999999998743
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.48 E-value=7.2 Score=32.88 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=54.3
Q ss_pred CCCEEEEeeCC----CeEEEEeCCCCCceeee-c-------CCCCEEEEEEec-CCcEEEEeC-C------CcEEEEEcc
Q psy11036 54 SSDIVISGSYD----KTVNVYDTRSPDPVMSV-N-------HGSPVESVLCLP-SGGIFVTGG-G------LDVCIWDML 113 (239)
Q Consensus 54 ~~~~l~s~~~d----g~v~vw~~~~~~~~~~~-~-------~~~~v~~~~~~~-~~~~l~~~~-~------~~i~~~d~~ 113 (239)
++.+++.|+.+ ..+.+||..+++....- . ....-.+++..+ ++..++.|+ + ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 67788888754 46888998877643322 1 111122333343 677777777 2 347888886
Q ss_pred CCCeEEEEEeccCC--ceEEEEEcCCCCEEEEEecCC--eEEEEEcc
Q psy11036 114 GGGKLLHKFTCHHK--TVTSLCLASGGKRLISASLDH--HAKIYEMT 156 (239)
Q Consensus 114 ~~~~~~~~~~~~~~--~i~~i~~~~~~~~l~~~~~d~--~i~i~d~~ 156 (239)
+.+ ...+..... .-.+++...+++.++.|+.++ .+.+||..
T Consensus 477 -t~~-W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~ 521 (695)
T 2zwa_A 477 -TRE-WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT 521 (695)
T ss_dssp -TTE-EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETT
T ss_pred -CCc-EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECC
Confidence 332 222211111 111222323677788887655 45666655
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.15 E-value=0.64 Score=40.77 Aligned_cols=38 Identities=26% Similarity=0.311 Sum_probs=33.8
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777888888999999999999999999999988765
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.72 E-value=6.6 Score=31.30 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=34.2
Q ss_pred CCEEEEEEecCCc--EEEEeCCCcEEEEEccCC--CeEEEEEe---------ccCCceEEEEEcCC
Q psy11036 85 SPVESVLCLPSGG--IFVTGGGLDVCIWDMLGG--GKLLHKFT---------CHHKTVTSLCLASG 137 (239)
Q Consensus 85 ~~v~~~~~~~~~~--~l~~~~~~~i~~~d~~~~--~~~~~~~~---------~~~~~i~~i~~~~~ 137 (239)
.....|+|.|++. ++++-..|.|++++.... ...+..+. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4467899999985 777666899999875311 11222221 11356789999996
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.57 E-value=0.8 Score=41.04 Aligned_cols=38 Identities=26% Similarity=0.311 Sum_probs=32.6
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEec
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 227 (239)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788999999999999999999999998865
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.35 E-value=5 Score=35.26 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=32.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
..+.+++..+ +..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3567777777 6789999999999999999999887765
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=85.13 E-value=2.1 Score=36.10 Aligned_cols=37 Identities=19% Similarity=0.415 Sum_probs=30.8
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccCCeeeEEecC
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 228 (239)
.|.++.+ +..++++-+.|+++|+|++++++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555554 478999999999999999999999888764
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.69 E-value=10 Score=28.16 Aligned_cols=99 Identities=8% Similarity=-0.041 Sum_probs=55.0
Q ss_pred EEecCCCCEEEEee----CCCeEEEEeCCCCCceeeecCCCCEEEEEEecCCcEEEEeCC--CcEEEEEccCCCeEEEEE
Q psy11036 49 TVSPVSSDIVISGS----YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG--LDVCIWDMLGGGKLLHKF 122 (239)
Q Consensus 49 ~~~~~~~~~l~s~~----~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~i~~~d~~~~~~~~~~~ 122 (239)
.|++ .++.|+-.. .+..|..-++..........+.. .+++|+++.|+-.++ ..|...++. .+... .+
T Consensus 110 ~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~-g~~~~-~l 182 (302)
T 3s25_A 110 YASL-IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTA-SQSEA-LF 182 (302)
T ss_dssp EEEE-ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETT-TTEEE-EE
T ss_pred EEEE-eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECC-CCCEE-EE
Confidence 6677 455555443 33456556665433333223322 456788888887763 678887876 33333 33
Q ss_pred eccCCceEEEEEcCCCCEEEEEecCC--eEEEEEccc
Q psy11036 123 TCHHKTVTSLCLASGGKRLISASLDH--HAKIYEMTL 157 (239)
Q Consensus 123 ~~~~~~i~~i~~~~~~~~l~~~~~d~--~i~i~d~~~ 157 (239)
.. +... ..+.|++.+|+-...++ .|..-++++
T Consensus 183 ~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 183 YD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred eC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 22 2222 34668888887765443 555555553
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=84.37 E-value=10 Score=27.83 Aligned_cols=27 Identities=4% Similarity=-0.020 Sum_probs=15.6
Q ss_pred cEEEEEEccCCCeEEEEcCCceEEEEEccC
Q psy11036 190 TVTSLCLASGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 190 ~v~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
.|..++...+...+++ ||.|+.|-...
T Consensus 220 ~v~~i~~G~~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 220 GVSAIASGEWYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp SCCEEEECSSCEEEEE---TTEEEEESTTC
T ss_pred CceEEEcCCCEEEEEE---CCEEEEecCCC
Confidence 4666665443333333 88898886544
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=84.05 E-value=13 Score=28.78 Aligned_cols=141 Identities=9% Similarity=0.075 Sum_probs=78.8
Q ss_pred CEEEEeeCCCc--ceeeeeeCCceeeccceeeccCCCCCeEEEEEe---cC--C-CCE-EEEeeCCCeEEEEeCCCCCce
Q psy11036 8 LIVALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVS---PV--S-SDI-VISGSYDKTVNVYDTRSPDPV 78 (239)
Q Consensus 8 g~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~-~~~-l~s~~~dg~v~vw~~~~~~~~ 78 (239)
-.|.+||+.++ +.++++.-.... ......+..+++. |. . +.+ .++=+..+.|.|+|+.+++..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~--------~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRL--------VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW 194 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGG--------CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCceeEEEEECCHHh--------cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE
Confidence 37889999998 888887654311 0112568888888 21 1 223 333334678999999988755
Q ss_pred eeec----C---------------CCCEEEEEEecC----CcEEEEeCCCcEEEEEcc-----CC--CeEEEEEecc--C
Q psy11036 79 MSVN----H---------------GSPVESVLCLPS----GGIFVTGGGLDVCIWDML-----GG--GKLLHKFTCH--H 126 (239)
Q Consensus 79 ~~~~----~---------------~~~v~~~~~~~~----~~~l~~~~~~~i~~~d~~-----~~--~~~~~~~~~~--~ 126 (239)
+.+. . ...+..|+.+|+ ++.|+-..-..-++|.+. .. ...++.+-.. .
T Consensus 195 Rv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~ 274 (381)
T 3q6k_A 195 NVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKY 274 (381)
T ss_dssp EEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTT
T ss_pred EEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCC
Confidence 4431 1 236777888887 666665552222333322 11 1112222111 1
Q ss_pred CceEEEEEc-CCCCEEEEEecCCeEEEEEcc
Q psy11036 127 KTVTSLCLA-SGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 127 ~~i~~i~~~-~~~~~l~~~~~d~~i~i~d~~ 156 (239)
..-..++.. .+|..+++--..+.|..|+..
T Consensus 275 s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 275 NDAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp CCEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred CCcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 223345564 566666666677777777765
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.50 E-value=12 Score=27.38 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=53.0
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee-eecCCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCCeEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVM-SVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHK 121 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~~~~~~ 121 (239)
..|..++... ...++. . ||.|..|-.......- -......|..++.-... .++.. +|.|..|-....++.-.
T Consensus 63 ~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h-s~al~-~G~v~~wG~n~~gqlg~- 135 (282)
T 3qhy_B 63 SGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA-SYALK-DGKVIAWGDDSDGQTTV- 135 (282)
T ss_dssp SCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE-EEEEE-TTEEEEEECCTTSTTSC-
T ss_pred CCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE-EEEEe-CCeEEEecCCCCCcCCC-
Confidence 4566666543 233333 4 8888888765322111 11223467777766543 34444 88888887653333211
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 122 FTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 122 ~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
-......|..++...+ +.+.-. ||.+..|-..
T Consensus 136 ~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 136 PAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDN 167 (282)
T ss_dssp CGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECC
T ss_pred CccCCCCeEEEEcccC--EEEEEE-CCEEEEecCC
Confidence 0112345666655332 222233 6777777554
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.75 E-value=20 Score=28.59 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=60.0
Q ss_pred CCeEEEEEecCCCC-EEEEeeCCCeEEEEeCCCC---Cceeeec----------CCCCEEEEEEecC----CcEEEEeC-
Q psy11036 43 DYVRAGTVSPVSSD-IVISGSYDKTVNVYDTRSP---DPVMSVN----------HGSPVESVLCLPS----GGIFVTGG- 103 (239)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~s~~~dg~v~vw~~~~~---~~~~~~~----------~~~~v~~~~~~~~----~~~l~~~~- 103 (239)
.....|+|.| ++. .|+++...|.|++++.... +.+..+. .......|+++|+ +.+.++-+
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 5567999999 554 4555577899999975422 1222221 1456889999996 43333322
Q ss_pred --CC----------cEEEEEccC---------CCeEEEEEe--ccCCceEEEEEcCCCCEEEEEecC
Q psy11036 104 --GL----------DVCIWDMLG---------GGKLLHKFT--CHHKTVTSLCLASGGKRLISASLD 147 (239)
Q Consensus 104 --~~----------~i~~~d~~~---------~~~~~~~~~--~~~~~i~~i~~~~~~~~l~~~~~d 147 (239)
++ .|.-|.+.. ..+.+..+. .....-..|+|.|||.+.++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 344455531 122333333 112345789999999877776543
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=73.71 E-value=29 Score=26.85 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=79.1
Q ss_pred eEEEEeCCCC--Cceeeec-------CCCCEEEEEEe---cC----CcEEEEeC--CCcEEEEEccCCCeEEEEEecc--
Q psy11036 66 TVNVYDTRSP--DPVMSVN-------HGSPVESVLCL---PS----GGIFVTGG--GLDVCIWDMLGGGKLLHKFTCH-- 125 (239)
Q Consensus 66 ~v~vw~~~~~--~~~~~~~-------~~~~v~~~~~~---~~----~~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~-- 125 (239)
.|.+||+.+. +.++++. ....+..+++. |. +.+++.+. ...|.++|+. +++..+....+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~-~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHK-KQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETT-TTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECC-CCcEEEEccCCCc
Confidence 6889999999 8887763 23457888888 22 34445444 4779999998 55544433100
Q ss_pred ----------------CCceEEEEEcCC----CCEEEEEecCCeEEEEEcccceEeeeecceeEEEEEccCCCEEEEEEe
Q psy11036 126 ----------------HKTVTSLCLASG----GKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185 (239)
Q Consensus 126 ----------------~~~i~~i~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 185 (239)
...+..|+++|+ ++.|.-....+. ++|.+..+.+..-+. ...-+.+.. +
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~---------~~~v~~~G~-k 271 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGG---------KLNPELLGN-R 271 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTC---------CCCCEEEEE-C
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcch---------hhceEEeee-c
Confidence 236777888876 555555544331 233332111110000 001111111 1
Q ss_pred cccCcEEEEEEc-cCCCeEEEEcCCceEEEEEccC
Q psy11036 186 CHHKTVTSLCLA-SGGKRLISASLDHHAKIYEMVN 219 (239)
Q Consensus 186 ~h~~~v~~~~~s-~~~~~l~s~s~d~~i~iwd~~~ 219 (239)
+....-..+++. .+|.++++--....|..|+..+
T Consensus 272 g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 272 GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 111233455675 5777778878888999998865
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.03 E-value=35 Score=28.15 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=39.7
Q ss_pred CEEEEEEecCCcEEEEeC-C------------CcEEEEEccCCCeEEEEEecc-CCceEEEEEcCCCCEEEEEe
Q psy11036 86 PVESVLCLPSGGIFVTGG-G------------LDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGKRLISAS 145 (239)
Q Consensus 86 ~v~~~~~~~~~~~l~~~~-~------------~~i~~~d~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~~ 145 (239)
....|.|.++|.+.++.. . ..+..++.. .++....+... ...++.++|+||++.|.+.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~-tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT-TCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC-CCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456899999998887443 1 135555554 45555544432 35789999999999887764
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.30 E-value=8.5 Score=32.55 Aligned_cols=35 Identities=9% Similarity=0.087 Sum_probs=28.0
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.|.++.+ +..++++-+.|.++|+|++++++++...
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 3554444 4679999999999999999999887766
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=71.26 E-value=23 Score=29.32 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=39.5
Q ss_pred CeEEEEEecCCCCEEEEeeCC------------CeEEEEeCCCCCceeee--cCCCCEEEEEEecCCcEEEEe
Q psy11036 44 YVRAGTVSPVSSDIVISGSYD------------KTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTG 102 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~d------------g~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 102 (239)
..-.|+|+| .+++++.-..+ ..+.+.+..+++..+-+ .....++.++|+|+++.|++.
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 456789999 67766653321 23555566666654444 466789999999999888765
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.53 E-value=3.9 Score=36.70 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=30.4
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 81 (239)
.+.+++..+ +..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566666 6789999999999999999999887765
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=70.17 E-value=29 Score=28.73 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=38.5
Q ss_pred EEEEEEecCCcEEEEeCC-------------CcEEEEEccCCCeEEEEEecc-CCceEEEEEcCCCCEEEEE
Q psy11036 87 VESVLCLPSGGIFVTGGG-------------LDVCIWDMLGGGKLLHKFTCH-HKTVTSLCLASGGKRLISA 144 (239)
Q Consensus 87 v~~~~~~~~~~~l~~~~~-------------~~i~~~d~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~~~ 144 (239)
.-.|+|+|.|.++++-.. ..+.+.+.. .++....+... ...++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~-~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT-TCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC-CCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 467899999987766541 124444544 55555555543 4689999999999877665
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.90 E-value=37 Score=25.60 Aligned_cols=113 Identities=12% Similarity=0.056 Sum_probs=63.8
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCC--CCCc-------e--eeecCCCCEEEEEEecCCcEEEEeC-CCcEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTR--SPDP-------V--MSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIW 110 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~--~~~~-------~--~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~~~ 110 (239)
+.+..+.... +...++..+..|.+..+... .-.. + ..+.....|.++...+.+..++..+ .|.++.-
T Consensus 146 D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 146 DELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp CCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred CEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 5566666655 55677778888988887766 2111 1 1223456677776665555555555 7888887
Q ss_pred EccCC------CeEEEEE--eccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 111 DMLGG------GKLLHKF--TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 111 d~~~~------~~~~~~~--~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
.+..- ++-+..+ ..-.+.+..+....+...++..+.+|.+.-++..
T Consensus 225 ~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 225 AIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 76410 1112212 1213345444444445566667777777766655
No 365
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=64.02 E-value=66 Score=27.20 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=62.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceee-ec-----CCCCEEEEEEecCCcEEEEeCCCcEEEEEccCCC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VN-----HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG 116 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~~~i~~~d~~~~~ 116 (239)
..|.++.... ++.+.+ |+.+ -+..++..+++.... .. ....|.++...+++..+-.+.++.+..+|.. .+
T Consensus 146 ~~i~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~-~~ 221 (758)
T 3ott_A 146 NTIYSIIRTK-DNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPS-TG 221 (758)
T ss_dssp SCEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETT-TT
T ss_pred CeEEEEEEcC-CCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCC-CC
Confidence 5688887776 455544 4554 477788766543221 11 1234888888877664444445568888876 44
Q ss_pred eEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 117 ~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
+...........|.++...++|.+.+ |+.+ -+.+++..
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~ 259 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHND 259 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCT
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecC
Confidence 32221111234578888877776544 4444 46677765
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.72 E-value=68 Score=26.52 Aligned_cols=60 Identities=10% Similarity=0.024 Sum_probs=41.3
Q ss_pred CCeEEEEEecCCCCEEEEeeC------------CCeEEEEeCCCCCceeeec--CCCCEEEEEEecCCcEEEEeC
Q psy11036 43 DYVRAGTVSPVSSDIVISGSY------------DKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGG 103 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~------------dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 103 (239)
.....|.|.+ ++.+.+.... ...|..++..+++....+. ....++.++|+|+++.|+++-
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567899999 6777763211 1256667776776554442 346789999999999888764
No 367
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=58.72 E-value=56 Score=24.60 Aligned_cols=113 Identities=10% Similarity=0.087 Sum_probs=67.7
Q ss_pred CCeEEEEEecC--CCCEEEEeeCCCeEEEEeCCCCCc-----e--eeecCCCCEEEEEEec-CCcEEEEeCCCcEEEEEc
Q psy11036 43 DYVRAGTVSPV--SSDIVISGSYDKTVNVYDTRSPDP-----V--MSVNHGSPVESVLCLP-SGGIFVTGGGLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~--~~~~l~s~~~dg~v~vw~~~~~~~-----~--~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~~~d~ 112 (239)
+.|..+..-+. +...++..+.+|.++.-.+..... . ..+.....+..+.... +...++....|.+..+..
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~ 174 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSA 174 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEC
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEEC
Confidence 55666544431 367899999999999887653221 1 1223345555554444 444555555788776665
Q ss_pred c--C---C-----CeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc
Q psy11036 113 L--G---G-----GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156 (239)
Q Consensus 113 ~--~---~-----~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~ 156 (239)
. . . +.....+. ....|.++...+++..++..+..|.++.-.+.
T Consensus 175 ~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 175 TDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred cccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 4 1 1 11111122 23456666666666789999999999888766
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=53.88 E-value=68 Score=24.08 Aligned_cols=113 Identities=11% Similarity=0.043 Sum_probs=63.9
Q ss_pred CCeEEEEEecC--CCCEEEEeeCCCeEEEEeCCCC------Ccee--eecCCCCEEEEEEec-CCcEEEEeCCCcEEEEE
Q psy11036 43 DYVRAGTVSPV--SSDIVISGSYDKTVNVYDTRSP------DPVM--SVNHGSPVESVLCLP-SGGIFVTGGGLDVCIWD 111 (239)
Q Consensus 43 ~~v~~~~~~~~--~~~~l~s~~~dg~v~vw~~~~~------~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~~~d 111 (239)
+.|.++...++ ++.+++..+.+|.++.-.+..- .-+. .+.....+..+.... +...++.+.+|.+..++
T Consensus 92 e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~ 171 (323)
T 1wp5_A 92 EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFD 171 (323)
T ss_dssp CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEE
T ss_pred CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 45666544331 2567888899999998876421 1122 223345565555444 44455555678887777
Q ss_pred ccCC--------CeEEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEEcc
Q psy11036 112 MLGG--------GKLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMT 156 (239)
Q Consensus 112 ~~~~--------~~~~~~~~~~~~~i~~i~~~~~~~-~l~~~~~d~~i~i~d~~ 156 (239)
...- +.....+. ....|.++..-+++. .+++.+..|..+..++.
T Consensus 172 ~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 172 ESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp GGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred HHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 6421 11111222 234455554444444 78888888888777765
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=52.94 E-value=68 Score=23.86 Aligned_cols=161 Identities=12% Similarity=0.088 Sum_probs=88.9
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCC---C------CCce---eeecCCCCEEEEEEec---CCc-EEEEeCCCc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTR---S------PDPV---MSVNHGSPVESVLCLP---SGG-IFVTGGGLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~---~------~~~~---~~~~~~~~v~~~~~~~---~~~-~l~~~~~~~ 106 (239)
+.+..+.... ..+.++..+..|.++-.... . |.++ ..+.....|.++...+ +.. ++++...|.
T Consensus 47 D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 47 DEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 4565665555 56677777888987766543 1 1111 1223445666664443 234 444445798
Q ss_pred EEEEEccC------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEccc-ceEeeeecceeEEEEEccCCCE
Q psy11036 107 VCIWDMLG------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLDVCIWDMLGGGK 179 (239)
Q Consensus 107 i~~~d~~~------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~i~~~d~~~~~~ 179 (239)
++...+.. .+.....+.. .+.+..+....++..++..+.+|....+.... ...... ..+.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~------------~~Gv 192 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRG------------TQGV 192 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT------------BCCE
T ss_pred EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCC------------CCCe
Confidence 88887742 1222222333 44566665555566788889999998888761 111110 0112
Q ss_pred EEEEEecccCcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 180 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
....+.. ...|..+..-+++..+++.+..|..+...+.
T Consensus 193 ~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 193 CGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp ECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 2222222 2345555444456667788888888888774
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=48.34 E-value=88 Score=23.81 Aligned_cols=106 Identities=9% Similarity=-0.037 Sum_probs=53.5
Q ss_pred CCeEEEEEecCCCCEEEEeeCCC----eEEEEeCCCCCceeeec---------------CCCCEEEEEEecC--CcEEEE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDK----TVNVYDTRSPDPVMSVN---------------HGSPVESVLCLPS--GGIFVT 101 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg----~v~vw~~~~~~~~~~~~---------------~~~~v~~~~~~~~--~~~l~~ 101 (239)
..|.+|++.|.+...+..++..| .|... ...++.-..+. ....|.++++.|. ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56999999985455555565555 44333 23333222221 0124778888862 344444
Q ss_pred eC-CCcEEEEEccCCCeEEEEEec-------------------cCCceEEEEEcCC-CCEEEEEecCCeEE
Q psy11036 102 GG-GLDVCIWDMLGGGKLLHKFTC-------------------HHKTVTSLCLASG-GKRLISASLDHHAK 151 (239)
Q Consensus 102 ~~-~~~i~~~d~~~~~~~~~~~~~-------------------~~~~i~~i~~~~~-~~~l~~~~~d~~i~ 151 (239)
+. .+.|.. ....++....+.. ....+.+|.++|. ...+..+..++.+.
T Consensus 134 g~~~ggl~~--S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~ 202 (394)
T 3b7f_A 134 GTSPQGLFR--STDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVF 202 (394)
T ss_dssp EEETTEEEE--ESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEE
T ss_pred EecCCcEEE--EcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEE
Confidence 43 454443 3323333333221 1235788999873 44555555555443
No 371
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=45.38 E-value=99 Score=23.53 Aligned_cols=98 Identities=7% Similarity=-0.025 Sum_probs=50.4
Q ss_pred CCEEEEeeCCCeEEEEeCCC-CCceeee---cCCCCEEEEEEec--CCcEEEEeCCC--cEEEEEccCCCeEEEEEec--
Q psy11036 55 SDIVISGSYDKTVNVYDTRS-PDPVMSV---NHGSPVESVLCLP--SGGIFVTGGGL--DVCIWDMLGGGKLLHKFTC-- 124 (239)
Q Consensus 55 ~~~l~s~~~dg~v~vw~~~~-~~~~~~~---~~~~~v~~~~~~~--~~~~l~~~~~~--~i~~~d~~~~~~~~~~~~~-- 124 (239)
...|..|+..| +.+++... ++....+ .....|.+|++.| .+.+++.+..+ .-.||.....++....+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence 45677787777 55555432 2222221 2346799999998 55566555444 1123333323332222211
Q ss_pred ------------cCCceEEEEEcCC--CCEEEEEecCCeEEEE
Q psy11036 125 ------------HHKTVTSLCLASG--GKRLISASLDHHAKIY 153 (239)
Q Consensus 125 ------------~~~~i~~i~~~~~--~~~l~~~~~d~~i~i~ 153 (239)
....|.++++.|. ...+.+++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 1124778888862 4556666666654433
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=44.12 E-value=1.5e+02 Score=25.20 Aligned_cols=33 Identities=3% Similarity=0.088 Sum_probs=21.0
Q ss_pred cCcEEEEEEccCCCeEEEEcCCc--eEEEEEccCCe
Q psy11036 188 HKTVTSLCLASGGKRLISASLDH--HAKIYEMVNFS 221 (239)
Q Consensus 188 ~~~v~~~~~s~~~~~l~s~s~d~--~i~iwd~~~~~ 221 (239)
...+..+.+..+ .++++...++ .+.++++.+++
T Consensus 349 ~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 349 NEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp TEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 345667777764 5666666665 46677776664
No 373
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=40.62 E-value=1.7e+02 Score=24.84 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=57.4
Q ss_pred CeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC-------CCCEEEEEEecC--CcEEEEeCC-------Cc
Q psy11036 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH-------GSPVESVLCLPS--GGIFVTGGG-------LD 106 (239)
Q Consensus 44 ~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~-------~~~v~~~~~~~~--~~~l~~~~~-------~~ 106 (239)
.|..|+++|.+...+..+...+.|...+- .++.-..+ .. ...+.+++++|. +..+++.+. +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 79999999966667777776666655542 23332222 21 245899999983 234444332 13
Q ss_pred EEEEEccCCCeEEEEEec-cC--------CceEEEEEcCC-CCEEEEEec
Q psy11036 107 VCIWDMLGGGKLLHKFTC-HH--------KTVTSLCLASG-GKRLISASL 146 (239)
Q Consensus 107 i~~~d~~~~~~~~~~~~~-~~--------~~i~~i~~~~~-~~~l~~~~~ 146 (239)
..+|.....++--..+.. .. ..+..++++|. ...+..+..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 566666544443333321 10 12467889885 356666653
No 374
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=36.91 E-value=2e+02 Score=24.66 Aligned_cols=105 Identities=10% Similarity=0.118 Sum_probs=59.4
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeee-cC-------CCCEEEEEEecCC-cEEEEe-CCCc----EE
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NH-------GSPVESVLCLPSG-GIFVTG-GGLD----VC 108 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~-------~~~v~~~~~~~~~-~~l~~~-~~~~----i~ 108 (239)
+.|.+|+++|.+...++.++..+.|...+ ..++.-..+ .. ...+.+++++|.. ..++++ ++.. -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 68999999996677777777777665544 234333333 21 2469999999843 333333 3322 45
Q ss_pred EEEccCCCeEEEEEecc---------CCceEEEEEcCC-CCEEEEEecCC
Q psy11036 109 IWDMLGGGKLLHKFTCH---------HKTVTSLCLASG-GKRLISASLDH 148 (239)
Q Consensus 109 ~~d~~~~~~~~~~~~~~---------~~~i~~i~~~~~-~~~l~~~~~d~ 148 (239)
||.....++.-..+... ...+..++++|. ...+..+...+
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 55555455555444321 013456788874 34555555333
No 375
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=36.29 E-value=1.3e+02 Score=22.45 Aligned_cols=161 Identities=11% Similarity=0.047 Sum_probs=85.2
Q ss_pred CCeEEEEEecCCCCEEEEeeCCCeEEEEeC---CC------CCceee---ecCCCCEEEEEEecC---CcEEEEeC-CCc
Q psy11036 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDT---RS------PDPVMS---VNHGSPVESVLCLPS---GGIFVTGG-GLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~~~~~l~s~~~dg~v~vw~~---~~------~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~-~~~ 106 (239)
+.+..+.... ..+.|+..+..|.+.-... .. |.++.. +.....|.++..-++ +.+++..+ .|.
T Consensus 39 D~l~~~~~~~-t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 39 DRLLAMLEMN-TKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp CCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CEEEEEEEEC-CCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 4565655555 5666777778887665543 22 222211 234456666544332 44455555 799
Q ss_pred EEEEEccC-------CCeEEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCC
Q psy11036 107 VCIWDMLG-------GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGG 178 (239)
Q Consensus 107 i~~~d~~~-------~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~ 178 (239)
++-..+.. .+.....+.. .+.+..+........++..+.+|.+..+... -...... ..-++..++
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~--a~GV~~i~L---- 190 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVR--AAGVKGMNL---- 190 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSS--CCCEECCCC----
T ss_pred EEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCC--CcCEEEEEe----
Confidence 99887741 1111112332 2455555555556678888899998888876 1111110 000222222
Q ss_pred EEEEEEecccCcEEEEEEccCCC-eEEEEcCCceEEEEEcc
Q psy11036 179 KLLHKFTCHHKTVTSLCLASGGK-RLISASLDHHAKIYEMV 218 (239)
Q Consensus 179 ~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~i~iwd~~ 218 (239)
.. ...|.++..-+++. .|++.+..|..+..++.
T Consensus 191 ------~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 191 ------KE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp ------CT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ------CC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 21 23344443333344 67778888887777764
No 376
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.62 E-value=1.3e+02 Score=22.25 Aligned_cols=149 Identities=15% Similarity=0.174 Sum_probs=77.9
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCc-------eee--ecCCCCEEEEEE-ecCCcEEEEeCCCcEEEEEccC---CC----
Q psy11036 54 SSDIVISGSYDKTVNVYDTRSPDP-------VMS--VNHGSPVESVLC-LPSGGIFVTGGGLDVCIWDMLG---GG---- 116 (239)
Q Consensus 54 ~~~~l~s~~~dg~v~vw~~~~~~~-------~~~--~~~~~~v~~~~~-~~~~~~l~~~~~~~i~~~d~~~---~~---- 116 (239)
+...+++.+.+|.|+--.+..-+. ... +.....+..+.. +.....++....|.++-..... .+
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~ 86 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASK 86 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCC
Confidence 456788889999999876643321 111 223344444443 4444555555578766655431 11
Q ss_pred -eE---EEEEeccCCceEEEEEcC---CCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEeccc
Q psy11036 117 -KL---LHKFTCHHKTVTSLCLAS---GGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHH 188 (239)
Q Consensus 117 -~~---~~~~~~~~~~i~~i~~~~---~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~ 188 (239)
.+ ...+.. ...|..+...+ +..+++..+..|.++-..+. ..... - .+.....+.. .
T Consensus 87 G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-~-------------~G~~~i~L~~-~ 150 (312)
T 1suu_A 87 GQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-S-------------RGVIVIKLND-K 150 (312)
T ss_dssp -CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------------------CEECBCCCT-T
T ss_pred CcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-C-------------CcEEEEecCC-C
Confidence 00 001111 23444443332 45678888999999988876 21111 0 1222222232 3
Q ss_pred CcEEEEEEccCCCeEEEEcCCceEEEEEcc
Q psy11036 189 KTVTSLCLASGGKRLISASLDHHAKIYEMV 218 (239)
Q Consensus 189 ~~v~~~~~s~~~~~l~s~s~d~~i~iwd~~ 218 (239)
..+..+....++..++..+.+|.+..+...
T Consensus 151 d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ 180 (312)
T 1suu_A 151 DFVTSAEIVFKDEKVICLSKKGSAFIFNSR 180 (312)
T ss_dssp CCEEEEEEECTTCEEEEEETTSEEEEEEGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCcEEEEEHH
Confidence 345444444445567777888888888764
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.04 E-value=1.9e+02 Score=23.26 Aligned_cols=65 Identities=12% Similarity=0.050 Sum_probs=41.7
Q ss_pred CeEEEEEecC-----CCCEEEEeeCCCeEEEEeCC-CCC-------ceeee---cCCCCEEEEEEecCCcEEEEeCCCcE
Q psy11036 44 YVRAGTVSPV-----SSDIVISGSYDKTVNVYDTR-SPD-------PVMSV---NHGSPVESVLCLPSGGIFVTGGGLDV 107 (239)
Q Consensus 44 ~v~~~~~~~~-----~~~~l~s~~~dg~v~vw~~~-~~~-------~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~i 107 (239)
..+.|+.... +-..+..|+.+|.|.-.-+. .+. .+..+ ....+|..|.++++...|+++++..|
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 5788877642 12357788999987544332 211 11122 35678999999999999999986554
Q ss_pred E
Q psy11036 108 C 108 (239)
Q Consensus 108 ~ 108 (239)
.
T Consensus 485 ~ 485 (495)
T 1q47_A 485 A 485 (495)
T ss_dssp E
T ss_pred E
Confidence 4
No 378
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=32.66 E-value=1.7e+02 Score=22.48 Aligned_cols=71 Identities=10% Similarity=0.047 Sum_probs=41.0
Q ss_pred CCeEEEEEecC--CCCEEEEeeCCCeEEEEeCCCCC-----cee--eecCCCCEEEEEEec-CCcEEEEeCCCcEEEEEc
Q psy11036 43 DYVRAGTVSPV--SSDIVISGSYDKTVNVYDTRSPD-----PVM--SVNHGSPVESVLCLP-SGGIFVTGGGLDVCIWDM 112 (239)
Q Consensus 43 ~~v~~~~~~~~--~~~~l~s~~~dg~v~vw~~~~~~-----~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~~~d~ 112 (239)
..|.++..... .+.+|+.++..|.++.-.+.... -+. .+.....+..+.... +...++....|.+..++.
T Consensus 99 e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 99 ERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEc
Confidence 55666654421 34688889999999988764221 111 223344555554444 344555555787777765
Q ss_pred c
Q psy11036 113 L 113 (239)
Q Consensus 113 ~ 113 (239)
.
T Consensus 179 ~ 179 (370)
T 3l6v_A 179 S 179 (370)
T ss_dssp G
T ss_pred c
Confidence 4
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=27.55 E-value=2.5e+02 Score=22.89 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=21.9
Q ss_pred cCcEE-EEEEccCCCeEEEEcCCceEEE
Q psy11036 188 HKTVT-SLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 188 ~~~v~-~~~~s~~~~~l~s~s~d~~i~i 214 (239)
..+|. .|.+++++.+|..++.++.++|
T Consensus 449 ~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 449 GSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred CCccccceEEccCCCeEEEEecccccee
Confidence 45775 8899999999999988876666
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=27.13 E-value=1.7e+02 Score=20.92 Aligned_cols=146 Identities=14% Similarity=0.125 Sum_probs=75.5
Q ss_pred EEEEeeCCCeEEEEeCCCCCc-eeeecCCCCEEEE-EEecCCcEEEEeCCCcEEEEE---c---cCCCeEEE---EEecc
Q psy11036 57 IVISGSYDKTVNVYDTRSPDP-VMSVNHGSPVESV-LCLPSGGIFVTGGGLDVCIWD---M---LGGGKLLH---KFTCH 125 (239)
Q Consensus 57 ~l~s~~~dg~v~vw~~~~~~~-~~~~~~~~~v~~~-~~~~~~~~l~~~~~~~i~~~d---~---~~~~~~~~---~~~~~ 125 (239)
..++.+.+|.|+--....... ...+.....+..+ ..+.....++....|.+.-+. + +..+.++. .+. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-P 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-T
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-C
Confidence 455667778777655433211 1123333444443 344455666666677755543 3 21222111 122 2
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEEcc-cceEeeeecceeEEEEEccCCCEEEEEEecccCcEEEEEEc-cCCCeE
Q psy11036 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA-SGGKRL 203 (239)
Q Consensus 126 ~~~i~~i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l 203 (239)
...|..+....++.+++.++..|.++...+. .... +..+.....+.. ...+..+... .++..+
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~--------------~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i 147 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVAR--------------NRAGKALITLPE-NAHVMPPVVIEDASDML 147 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCC--------------STTCEECBCCCT-TCCBCCCEECCCTTCEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhccc--------------CcCceEEEEECC-CCEEEEEEEecCCCCEE
Confidence 3456666443456678889999999988876 1110 011222222222 2234343344 344567
Q ss_pred EEEcCCceEEEEEcc
Q psy11036 204 ISASLDHHAKIYEMV 218 (239)
Q Consensus 204 ~s~s~d~~i~iwd~~ 218 (239)
+..+.+|.+..+...
T Consensus 148 ~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 148 LAITQAGRMLMFPVS 162 (256)
T ss_dssp EEEETTSEEEEEEGG
T ss_pred EEEcCCCeEEEEEHH
Confidence 777888888888764
No 381
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=25.17 E-value=1.2e+02 Score=18.40 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=13.4
Q ss_pred EEEEecCCcEEEEeCCCcEEEEEcc
Q psy11036 89 SVLCLPSGGIFVTGGGLDVCIWDML 113 (239)
Q Consensus 89 ~~~~~~~~~~l~~~~~~~i~~~d~~ 113 (239)
.+.+..+|.+++...++.+ +|...
T Consensus 60 ~l~l~~dGNLVl~d~~~~~-iW~S~ 83 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLNT-VFVSN 83 (113)
T ss_dssp EEEECTTSCEEEECTTSCE-EEECS
T ss_pred EEEEeCCCcEEEECCCCCE-EEECC
Confidence 4556666666665444443 56654
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.70 E-value=2.6e+02 Score=22.50 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=23.3
Q ss_pred cCcEEEEEEccCCCeEEEEcCCceEEE
Q psy11036 188 HKTVTSLCLASGGKRLISASLDHHAKI 214 (239)
Q Consensus 188 ~~~v~~~~~s~~~~~l~s~s~d~~i~i 214 (239)
..+|..|.++++.++|..++.++.++|
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 578999999999999999998887665
No 383
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.41 E-value=3.4e+02 Score=22.94 Aligned_cols=70 Identities=13% Similarity=0.076 Sum_probs=42.4
Q ss_pred CCeEEEEEecC---CC--CEEEEeeCCCeEE-EEeCCCCC-------ce---eeecCCCCEEEEEEecCCcEEEEeCCCc
Q psy11036 43 DYVRAGTVSPV---SS--DIVISGSYDKTVN-VYDTRSPD-------PV---MSVNHGSPVESVLCLPSGGIFVTGGGLD 106 (239)
Q Consensus 43 ~~v~~~~~~~~---~~--~~l~s~~~dg~v~-vw~~~~~~-------~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 106 (239)
...+.|+.... ++ ..+..|+.+|.|. +....... .+ ..+....+|..|.++++...|+++++..
T Consensus 412 ~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~ 491 (667)
T 4gz8_A 412 YQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 491 (667)
T ss_dssp CCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred cceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCE
Confidence 34566666431 22 3677899999875 33222211 11 1224677899999999999999998655
Q ss_pred EEEEEc
Q psy11036 107 VCIWDM 112 (239)
Q Consensus 107 i~~~d~ 112 (239)
|.-..+
T Consensus 492 V~kVPl 497 (667)
T 4gz8_A 492 VAQLPL 497 (667)
T ss_dssp EEEEES
T ss_pred EEEEEh
Confidence 444444
No 384
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=20.24 E-value=1.5e+02 Score=19.41 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=17.3
Q ss_pred CCEEEEeeCCCcceeeeeeCCc
Q psy11036 7 ILIVALWDIPSEAQVSTFTNHT 28 (239)
Q Consensus 7 dg~i~vwd~~~~~~~~~~~~~~ 28 (239)
++.|+|.|..+...+..++-+.
T Consensus 63 ~~tlrLvD~~tk~~L~~~pI~~ 84 (148)
T 3d8d_A 63 DETLKLVEPQSQALLHAQPIIS 84 (148)
T ss_dssp TTEEEEECTTTCCEEEEEEGGG
T ss_pred CCeEEEecCCCCceEEEeeEEE
Confidence 4788888888888777777665
Done!