Your job contains 1 sequence.
>psy11036
MSHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVIS
GSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLH
KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKL
LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11036
(239 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8TED0 - symbol:UTP15 "U3 small nucleolar RNA-a... 364 2.0e-33 1
UNIPROTKB|B4DXK8 - symbol:UTP15 "cDNA FLJ57656, highly si... 364 2.0e-33 1
UNIPROTKB|Q5F3D7 - symbol:UTP15 "U3 small nucleolar RNA-a... 364 2.0e-33 1
UNIPROTKB|H0Y8P4 - symbol:UTP15 "U3 small nucleolar RNA-a... 364 3.0e-33 1
UNIPROTKB|A7MB12 - symbol:UTP15 "U3 small nucleolar RNA-a... 361 4.1e-33 1
UNIPROTKB|F1S2K2 - symbol:UTP15 "Uncharacterized protein"... 355 1.9e-32 1
MGI|MGI:2145443 - symbol:Utp15 "UTP15, U3 small nucleolar... 355 2.4e-32 1
RGD|1310992 - symbol:Utp15 "UTP15, U3 small nucleolar rib... 354 3.3e-32 1
UNIPROTKB|F6XII0 - symbol:UTP15 "Uncharacterized protein"... 345 3.0e-31 1
UNIPROTKB|E2QVD0 - symbol:UTP15 "Uncharacterized protein"... 345 3.1e-31 1
FB|FBgn0023527 - symbol:CG3071 species:7227 "Drosophila m... 323 1.3e-28 1
ZFIN|ZDB-GENE-030131-3831 - symbol:utp15 "utp15, U3 small... 307 6.5e-27 1
UNIPROTKB|G4NAV9 - symbol:MGG_03129 "U3 small nucleolar R... 264 8.2e-25 2
TAIR|locus:2043333 - symbol:SWA1 "AT2G47990" species:3702... 280 7.1e-24 1
UNIPROTKB|B4DU75 - symbol:UTP15 "cDNA FLJ61408, highly si... 268 2.9e-23 1
ASPGD|ASPL0000077901 - symbol:AN4648 species:162425 "Emer... 243 8.3e-20 1
POMBASE|SPBC428.19c - symbol:utp15 "U3 snoRNP protein Utp... 223 9.9e-18 1
WB|WBGene00021276 - symbol:Y23H5B.5 species:6239 "Caenorh... 205 1.2e-15 1
SGD|S000004699 - symbol:UTP15 "Nucleolar protein" species... 171 3.3e-11 1
DICTYBASE|DDB_G0283581 - symbol:utp15 "U3 snoRNP protein"... 162 8.8e-10 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 140 2.0e-09 2
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 155 2.1e-09 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 158 3.7e-09 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 157 4.8e-09 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 125 4.6e-08 2
CGD|CAL0000290 - symbol:UTP15 species:5476 "Candida albic... 147 5.1e-08 1
UNIPROTKB|Q59Y40 - symbol:CaO19.11092 "Putative uncharact... 147 5.1e-08 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 152 6.4e-08 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 119 7.2e-08 2
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 121 1.1e-07 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 133 1.3e-07 2
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 115 2.0e-07 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 140 2.6e-07 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 133 3.3e-07 2
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 113 4.0e-07 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 140 5.2e-07 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 101 5.2e-07 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 137 5.5e-07 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 135 7.4e-07 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 127 8.0e-07 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 128 9.5e-07 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 123 9.9e-07 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 127 1.1e-06 2
ZFIN|ZDB-GENE-070112-342 - symbol:gnb5a "guanine nucleoti... 111 1.5e-06 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 132 1.8e-06 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 116 1.8e-06 2
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 132 1.9e-06 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 104 2.0e-06 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 132 2.1e-06 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 132 2.1e-06 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 132 2.1e-06 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 132 2.1e-06 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 132 2.1e-06 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 127 2.3e-06 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 131 3.2e-06 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 133 3.4e-06 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 125 4.0e-06 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 121 4.2e-06 2
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 133 4.3e-06 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 130 4.6e-06 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 130 4.6e-06 1
TAIR|locus:2082891 - symbol:RID3 "AT3G49180" species:3702... 131 4.6e-06 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 114 4.9e-06 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 134 5.5e-06 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 112 5.7e-06 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 133 6.4e-06 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 128 6.8e-06 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 101 7.3e-06 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 114 7.9e-06 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 127 7.9e-06 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 109 8.3e-06 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 106 8.4e-06 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 101 8.6e-06 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 98 8.7e-06 2
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 91 9.2e-06 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 126 1.1e-05 1
ASPGD|ASPL0000061266 - symbol:AN10017 species:162425 "Eme... 131 1.1e-05 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 101 1.2e-05 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 101 1.2e-05 3
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 105 1.3e-05 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 120 1.3e-05 2
CGD|CAL0002120 - symbol:orf19.3862 species:5476 "Candida ... 125 1.4e-05 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 127 1.5e-05 1
ASPGD|ASPL0000057386 - symbol:AN1335 species:162425 "Emer... 126 1.5e-05 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 121 1.5e-05 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 101 1.7e-05 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 126 1.8e-05 1
RGD|620759 - symbol:Gnb5 "guanine nucleotide binding prot... 102 1.8e-05 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 124 1.8e-05 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 120 1.8e-05 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 84 1.9e-05 2
UNIPROTKB|E1BVN4 - symbol:GNB5 "Uncharacterized protein" ... 102 2.0e-05 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 117 2.0e-05 2
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 101 2.1e-05 2
UNIPROTKB|A5PJS1 - symbol:GNB5 "GNB5 protein" species:991... 101 2.4e-05 2
UNIPROTKB|Q6PNB6 - symbol:GNB5 "Guanine nucleotide-bindin... 101 2.4e-05 2
UNIPROTKB|I3LLQ2 - symbol:GNB5 "Uncharacterized protein" ... 101 2.4e-05 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 126 2.5e-05 1
MGI|MGI:101848 - symbol:Gnb5 "guanine nucleotide binding ... 102 2.5e-05 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 89 2.5e-05 2
WARNING: Descriptions of 136 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 76/155 (49%), Positives = 97/155 (62%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ I+GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFITGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ + V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 194 (73.4 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 285 SFDYAASILSL 295
Score = 65 (27.9 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGRLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEILTF 160
Score = 62 (26.9 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +F+TG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+L H + V S+ L G L+SA + K+++M
Sbjct: 197 SESVLS--VEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 234
>UNIPROTKB|B4DXK8 [details] [associations]
symbol:UTP15 "cDNA FLJ57656, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 HOGENOM:HOG000185028
HOVERGEN:HBG080690 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 IPI:IPI00967090 EMBL:AK302021 SMR:B4DXK8
STRING:B4DXK8 Ensembl:ENST00000508491 UCSC:uc011cso.1
Uniprot:B4DXK8
Length = 499
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 76/155 (49%), Positives = 97/155 (62%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ I+GSYD TV +
Sbjct: 127 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFITGSYDHTVKM 172
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ + V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 173 FDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 232
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 233 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 267
Score = 194 (73.4 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 206 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 265
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 266 SFDYAASILSL 276
Score = 62 (26.9 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +F+TG V ++D
Sbjct: 118 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART 177
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+L H + V S+ L G L+SA + K+++M
Sbjct: 178 SESVLS--VEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 215
Score = 58 (25.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 26/137 (18%), Positives = 56/137 (40%)
Query: 30 IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVES 89
I P++ QD + P + V + S +++Y S +P+ + +
Sbjct: 9 IQTYPILGEKITQDTLYWNNYKPPYNYAVTASS---RIHIYGRYSQEPIKTFSRFKDTAY 65
Query: 90 VLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 147
G + G D V ++D+ G L +F H K V ++ + ++S + D
Sbjct: 66 CATFRQDGRLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADD 124
Query: 148 HHAKIYEM-TLKTVSSF 163
+ K++++ K + +F
Sbjct: 125 YTVKLWDIPNSKEILTF 141
>UNIPROTKB|Q5F3D7 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:AJ851713 IPI:IPI00585633 RefSeq:NP_001012624.1
UniGene:Gga.22725 ProteinModelPortal:Q5F3D7 STRING:Q5F3D7
Ensembl:ENSGALT00000029725 GeneID:426152 KEGG:gga:426152
InParanoid:Q5F3D7 NextBio:20827852 Uniprot:Q5F3D7
Length = 520
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 75/154 (48%), Positives = 97/154 (62%)
Query: 11 ALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY 70
+LWDIPS ++ +++ H+ DYVR G S ++ D+ I+GSYD TV V+
Sbjct: 147 SLWDIPSATEIVSYSEHS--------------DYVRCGCASKLNGDVFITGSYDHTVKVF 192
Query: 71 DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVT 130
D R+ VM++ HG PVESVL PSGG+ V+ GG V +WD+L GG+LL HHKTVT
Sbjct: 193 DARTKSSVMTIEHGHPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVT 252
Query: 131 SLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
LCL S G+RL+S SLD H KIY T K V SF
Sbjct: 253 CLCLNSSGQRLLSGSLDRHVKIYSTTSYKVVHSF 286
Score = 195 (73.7 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WD+L GG+LL HHKTVT LCL S G+RL+S SLD H KIY ++ VH
Sbjct: 225 GGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHVKIYSTTSYKVVH 284
Query: 225 TLDYPSPVLSIDVS 238
+ +Y + +LS+ +S
Sbjct: 285 SFNYATSILSLALS 298
Score = 59 (25.8 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 25/128 (19%), Positives = 50/128 (39%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G ++ + V +Y T V++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAINKIDFSPVPPYNYAVTASSRVHIYGRYSQEPIKTFSRFKDAAYCATY 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G + + ++D+ G L +F H K V + S R+ S D+ +
Sbjct: 89 RDDGKLLVAGSEEGSIRLFDISGRAPL-RQFDGHTKAVHVVGFLSDKYRIFSGGDDYSSS 147
Query: 152 IYEMTLKT 159
++++ T
Sbjct: 148 LWDIPSAT 155
Score = 57 (25.1 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
+ SG D + +++D S ++S + S C +G +F+TG V ++D
Sbjct: 137 IFSGGDDYSSSLWDIPSATEIVSYSEHSDYVRCGCASKLNGDVFITGSYDHTVKVFDART 196
Query: 115 GGKLLHKFTCHH-KTVTSLCLASGGKRLISASLDHHAKIYEM 155
++ T H V S+ L G L+SA + K++++
Sbjct: 197 KSSVM---TIEHGHPVESVLLFPSGGLLVSAG-GRYVKVWDV 234
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 364 (133.2 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 76/155 (49%), Positives = 97/155 (62%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ I+GSYD TV +
Sbjct: 173 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFITGSYDHTVKM 218
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ + V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 219 FDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 278
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 279 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 313
Score = 194 (73.4 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 252 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 311
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 312 SFDYAASILSL 322
Score = 62 (26.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +F+TG V ++D
Sbjct: 164 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDART 223
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+L H + V S+ L G L+SA + K+++M
Sbjct: 224 SESVLS--VEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 261
Score = 58 (25.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 27/131 (20%), Positives = 53/131 (40%)
Query: 40 TPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCLPS 95
TP G VS V +Y T +++Y S +P+ + +
Sbjct: 58 TPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQ 117
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K++
Sbjct: 118 DGRLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLW 176
Query: 154 EM-TLKTVSSF 163
++ K + +F
Sbjct: 177 DIPNSKEILTF 187
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 75/155 (48%), Positives = 97/155 (62%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S +++D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNTDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 194 (73.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 285 SFDYTASILSL 295
Score = 68 (29.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 29/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V S+ + ++S + D+ K
Sbjct: 89 RQDGRLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHSVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEILTF 160
Score = 61 (26.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
++ H + V S+ L G L+SA + K+++M
Sbjct: 197 NQSVIS--VEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 234
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 355 (130.0 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 74/155 (47%), Positives = 96/155 (61%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+SV HG PVESVL PSGG+ V+ GG V +WD+L GG+LL HHKTV
Sbjct: 192 FDARTNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 190 (71.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WD+L GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 285 SFDYAASILSL 295
Score = 64 (27.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGRLLIAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEILTF 160
Score = 57 (25.1 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 24/101 (23%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
++ H + V S+ L G L+SA + K++++
Sbjct: 197 NQSVIS--VEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDV 234
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 355 (130.0 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 74/155 (47%), Positives = 95/155 (61%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKI 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+ V HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 197 (74.4 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSIDVS 238
+ DY + +LS+ +S
Sbjct: 285 SFDYAASILSLALS 298
Score = 73 (30.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 29/133 (21%), Positives = 55/133 (41%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V + +Y T +++Y S +PV + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D + G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGQLLVAGSEDGVVQLFD-INGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEILTF 160
Score = 65 (27.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V I+D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDART 196
Query: 115 GGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+L C H + V S+ L G L+SA + K+++M
Sbjct: 197 NKNVL----CVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 234
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 354 (129.7 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 75/155 (48%), Positives = 95/155 (61%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEILTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+ V HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKTV
Sbjct: 192 FDARTNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T LCL+S G+RL+S SLD KIY T K V SF
Sbjct: 252 TCLCLSSSGQRLLSGSLDRKVKIYSTTSYKVVHSF 286
Score = 198 (74.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD KIY ++ VH
Sbjct: 225 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKIYSTTSYKVVH 284
Query: 225 TLDYPSPVLSIDVS 238
+ DY + +LS+ +S
Sbjct: 285 SFDYAASILSLALS 298
Score = 66 (28.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 29/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +PV + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGQLLVAGSEDGVVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEILTF 160
Score = 62 (26.9 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+L H + V S+ L G L+SA + K+++M
Sbjct: 197 NKNVL--CVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDM 234
>UNIPROTKB|F6XII0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
GeneTree:ENSGT00390000004228 OMA:QFEGHTK Ensembl:ENSCAFT00000013108
EMBL:AAEX03001524 Uniprot:F6XII0
Length = 517
Score = 345 (126.5 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 74/155 (47%), Positives = 94/155 (60%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEIVTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+SV HG PVESVL PSGG+ + GG V IWDML GG+LL HHKTV
Sbjct: 192 FDARTNQSVISVEHGQPVESVLLFPSGGLLASAGGRYVKIWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T L L+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 184 (69.8 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V IWDML GG+LL HHKTVT L L+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKIWDMLKGGQLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 285 SFDYAASILSL 295
Score = 65 (27.9 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGKLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEIVTF 160
Score = 57 (25.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
++ H + V S+ L G L SA + KI++M
Sbjct: 197 NQSVIS--VEHGQPVESVLLFPSGGLLASAG-GRYVKIWDM 234
>UNIPROTKB|E2QVD0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
Ensembl:ENSCAFT00000013108 Uniprot:E2QVD0
Length = 518
Score = 345 (126.5 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 74/155 (47%), Positives = 94/155 (60%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWDIP+ ++ TF H+ DYVR G S ++ D+ ++GSYD TV +
Sbjct: 146 VKLWDIPNSKEIVTFKEHS--------------DYVRCGCASKLNPDLFVTGSYDHTVKM 191
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D R+ V+SV HG PVESVL PSGG+ + GG V IWDML GG+LL HHKTV
Sbjct: 192 FDARTNQSVISVEHGQPVESVLLFPSGGLLASAGGRYVKIWDMLKGGQLLVSLKNHHKTV 251
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
T L L+S G+RL+S SLD K+Y T K V SF
Sbjct: 252 TCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286
Score = 184 (69.8 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V IWDML GG+LL HHKTVT L L+S G+RL+S SLD K+Y ++ VH
Sbjct: 225 GGRYVKIWDMLKGGQLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 284
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 285 SFDYAASILSL 295
Score = 65 (27.9 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVNHGSPVESVLCL 93
Y TP G VS V +Y T +++Y S +P+ + +
Sbjct: 29 YKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATF 88
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
G + G D V ++D+ G L +F H K V ++ + ++S + D+ K
Sbjct: 89 RQDGKLLVAGSEDGGVQLFDISGRAPL-RQFEGHTKAVHTVDFTADKYHVVSGADDYTVK 147
Query: 152 IYEM-TLKTVSSF 163
++++ K + +F
Sbjct: 148 LWDIPNSKEIVTF 160
Score = 57 (25.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP--SGGIFVTGG-GLDVCIWDMLG 114
V+SG+ D TV ++D + +++ S C + +FVTG V ++D
Sbjct: 137 VVSGADDYTVKLWDIPNSKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART 196
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
++ H + V S+ L G L SA + KI++M
Sbjct: 197 NQSVIS--VEHGQPVESVLLFPSGGLLASAG-GRYVKIWDM 234
>FB|FBgn0023527 [details] [associations]
symbol:CG3071 species:7227 "Drosophila melanogaster"
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISS] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0006364
EMBL:AL009196 ProteinModelPortal:O46069 SMR:O46069 STRING:O46069
PaxDb:O46069 PRIDE:O46069 FlyBase:FBgn0023527 HOGENOM:HOG000037976
InParanoid:O46069 OrthoDB:EOG4RXWFP ArrayExpress:O46069 Bgee:O46069
Uniprot:O46069
Length = 535
Score = 323 (118.8 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 69/157 (43%), Positives = 97/157 (61%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LWD+ +E V T+ + T DYVRAG + P + + +SG YD + +
Sbjct: 147 VRLWDVANEKVVQTYED-------------THTDYVRAGAMHPQAGHMFVSGGYDGKIKL 193
Query: 70 YDTRSPDPVM-SVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
YDTR+ V +++HG+PVES+L LP+G IFV+ GG V +WD++ G +LL + HHKT
Sbjct: 194 YDTRAETAVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQHHKT 253
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFT 164
VT L L S G+RL+S LD H KIY++ T KTV + T
Sbjct: 254 VTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLT 290
Score = 207 (77.9 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 44/100 (44%), Positives = 61/100 (61%)
Query: 142 ISASLDHHAKIYEMT-LKTVSSFT--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 198
+ +LDH A + M L S F GG V +WD++ G +LL + HHKTVT L L S
Sbjct: 202 VQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQHHKTVTCLRLGS 261
Query: 199 GGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238
G+RL+S LD H KIY++ + VHTL YP+ V+S+ V+
Sbjct: 262 DGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAVA 301
>ZFIN|ZDB-GENE-030131-3831 [details] [associations]
symbol:utp15 "utp15, U3 small nucleolar
ribonucleoprotein, homolog" species:7955 "Danio rerio" [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-3831
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045766 InterPro:IPR018391
SMART:SM00564 GO:GO:0006364 CTD:84135 GeneTree:ENSGT00390000004228
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 EMBL:AY398371 EMBL:BC045308 IPI:IPI00491201
RefSeq:NP_955998.1 UniGene:Dr.78694 ProteinModelPortal:Q7ZW33
STRING:Q7ZW33 Ensembl:ENSDART00000127397 Ensembl:ENSDART00000148774
GeneID:325106 KEGG:dre:325106 InParanoid:Q7ZW33 NextBio:20809122
Bgee:Q7ZW33 Uniprot:Q7ZW33
Length = 517
Score = 307 (113.1 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 65/156 (41%), Positives = 92/156 (58%)
Query: 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
L +WD+ S ++S+ T HT DY+RA S ++ D+ ++GSYD TV
Sbjct: 144 LTCRVWDVASAVELSSITEHT--------------DYIRAIAPSKLNPDVFVTGSYDHTV 189
Query: 68 NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK 127
++D RS + VM++ HG PVE VL PS + V+ GG V +WD+L GG+ L HHK
Sbjct: 190 KMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHK 249
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163
TVT CL+S K L++ASLD H K+Y + K V +F
Sbjct: 250 TVTCACLSSSNK-LLTASLDRHVKVYNSSYKVVHNF 284
Score = 166 (63.5 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
TGG V +WD+L GG+ L HHKTVT CL+S K L++ASLD H K+Y ++ V
Sbjct: 224 TGGRYVKVWDLLKGGQQLVSLKNHHKTVTCACLSSSNK-LLTASLDRHVKVYNS-SYKVV 281
Query: 224 HTLDYPSPVLSIDVS 238
H D S +LS+ V+
Sbjct: 282 HNFDCASSILSLAVA 296
Score = 76 (31.8 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 35/140 (25%), Positives = 59/140 (42%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKT----VNVYDTRSPDPVMSVN--HGSPVESVL 91
Y P G VS + + +Y T V++Y S +P+ + H +
Sbjct: 29 YKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSF 88
Query: 92 CLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 149
G + V G GL + ++D +GG L +F H K V + S G R++S S D
Sbjct: 89 -RGDGKLLVAGSEEGL-IRLFD-IGGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLT 145
Query: 150 AKIYEMTLKT-VSSFTGGLD 168
+++++ +SS T D
Sbjct: 146 CRVWDVASAVELSSITEHTD 165
>UNIPROTKB|G4NAV9 [details] [associations]
symbol:MGG_03129 "U3 small nucleolar RNA-associated protein
15" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043581 EMBL:CM001234
GO:GO:0006364 KO:K14549 RefSeq:XP_003716870.1
ProteinModelPortal:G4NAV9 EnsemblFungi:MGG_03129T0 GeneID:2676926
KEGG:mgr:MGG_03129 Uniprot:G4NAV9
Length = 555
Score = 264 (98.0 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 61/151 (40%), Positives = 85/151 (56%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGT--VSPV---SSDIVISGSYD 64
V LWD+PS TF H QDYVR+G P S +I+++GSYD
Sbjct: 166 VRLWDLPSADPTRTFVGH--------------QDYVRSGAFMTGPAATGSGNILVTGSYD 211
Query: 65 KTVNVYDTRSPDP-VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFT 123
TV ++D R P P V++ H +P+E+VL LPSG + G + + D++ + L T
Sbjct: 212 STVRLWDARVPGPAVLTFQHTAPIEAVLPLPSGTTILAASGNSISVLDVVHA-RPLRTIT 270
Query: 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
H KTVTSLCLAS G+R++S LD H K+Y+
Sbjct: 271 NHQKTVTSLCLASNGRRVLSGGLDGHVKVYD 301
Score = 172 (65.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 66/196 (33%), Positives = 92/196 (46%)
Query: 51 SPVSSDI--VISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDV 107
SP D+ ++S S DKTV ++D S DP + V H V S G F+TG
Sbjct: 148 SPRPGDLTTLMSCSDDKTVRLWDLPSADPTRTFVGHQDYVRS-------GAFMTGPAAT- 199
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT--- 164
G G +L + + TV G +++ H A I E L S T
Sbjct: 200 ------GSGNILVTGS-YDSTVRLWDARVPGPAVLT--FQHTAPI-EAVLPLPSGTTILA 249
Query: 165 -GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY--EMVNFS 221
G + + D++ + L T H KTVTSLCLAS G+R++S LD H K+Y E ++
Sbjct: 250 ASGNSISVLDVVHA-RPLRTITNHQKTVTSLCLASNGRRVLSGGLDGHVKVYDAESGGWN 308
Query: 222 PVHTLDYPSPVLSIDV 237
V + YPSPV S+ V
Sbjct: 309 VVASTKYPSPVTSLSV 324
Score = 48 (22.0 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200
+GGLD V ++D GG + T + VTSL + S G
Sbjct: 290 SGGLDGHVKVYDAESGGWNVVASTKYPSPVTSLSVISAG 328
>TAIR|locus:2043333 [details] [associations]
symbol:SWA1 "AT2G47990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0000741 "karyogamy" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC005309 GO:GO:0009561
EMBL:AC006072 GO:GO:0006364 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK UniGene:At.436
UniGene:At.71162 IPI:IPI00525548 PIR:A84922 RefSeq:NP_182320.1
ProteinModelPortal:O82266 SMR:O82266 STRING:O82266 PaxDb:O82266
PRIDE:O82266 DNASU:819411 EnsemblPlants:AT2G47990.1 GeneID:819411
KEGG:ath:AT2G47990 TAIR:At2g47990 InParanoid:O82266
PhylomeDB:O82266 ProtClustDB:CLSN2683735 Genevestigator:O82266
Uniprot:O82266
Length = 530
Score = 280 (103.6 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 54/118 (45%), Positives = 80/118 (67%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR--SPDPVMSVNHGSPVESVLCLPSGGIF 99
+DYVR G SPV+ ++++GSYD TV V+D R + + + +NHG PVE V+ LPSGG+
Sbjct: 178 KDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLI 237
Query: 100 VTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA---SGGKRLISASLDHHAKIYE 154
T GG V +WD++GGGK++ H+KTVTSL +A S RL+S +LD + K+++
Sbjct: 238 ATAGGNSVKVWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFD 295
Score = 147 (56.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA---SGGKRLISASLDHHAKIYEMVNFS 221
GG V +WD++GGGK++ H+KTVTSL +A S RL+S +LD + K+++
Sbjct: 241 GGNSVKVWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAK 300
Query: 222 PVHTLDYPSPVLSIDVS 238
+++ +P+P++S+ +S
Sbjct: 301 VTYSMRFPAPLMSLGLS 317
Score = 42 (19.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 14 DIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTR 73
+ P S+F NH+T P ++ S V A SPV ++ ++ TV+++ ++
Sbjct: 33 ETPESRYWSSFKNHST----PNLVSS-----VAALAFSPVHPHS-LAVAHSATVSLFSSQ 82
Query: 74 SPDPVMSVNHGSPVESVLCLPSGGIF 99
S + V SV G +F
Sbjct: 83 SLSSSRRFSFRDVVSSVCFRSDGALF 108
Score = 37 (18.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 129 VTSLCLASGGKRLISASLDHHAKIYE----MTLKTVSS 162
V+S+C S G + L ++++ M L+T+ S
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRS 133
>UNIPROTKB|B4DU75 [details] [associations]
symbol:UTP15 "cDNA FLJ61408, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006364 HOVERGEN:HBG080690
OrthoDB:EOG4Q58P5 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 EMBL:AK300525 IPI:IPI00967090 SMR:B4DU75
STRING:B4DU75 Ensembl:ENST00000543251 Uniprot:B4DU75
Length = 328
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 53/96 (55%), Positives = 66/96 (68%)
Query: 69 VYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
++D R+ + V+SV HG PVESVL PSGG+ V+ GG V +WDML GG+LL HHKT
Sbjct: 1 MFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKT 60
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSF 163
VT LCL+S G+RL+S SLD K+Y T K V SF
Sbjct: 61 VTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 96
Score = 194 (73.4 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
GG V +WDML GG+LL HHKTVT LCL+S G+RL+S SLD K+Y ++ VH
Sbjct: 35 GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH 94
Query: 225 TLDYPSPVLSI 235
+ DY + +LS+
Sbjct: 95 SFDYAASILSL 105
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 243 (90.6 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 59/151 (39%), Positives = 82/151 (54%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSP---VSSDIVISGSYDKT 66
V LWD+PSE + +F H+ DYVR P SS ++SGSYD+T
Sbjct: 163 VRLWDLPSENSIKSFVGHS--------------DYVRTAAFMPGSLASSGSLVSGSYDRT 208
Query: 67 VNVYDTRSPD-PVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH 125
V ++D R M+ G+P+E+VL +P+G + + + D++ G K LH H
Sbjct: 209 VRLWDPRMEGRSAMTFKMGAPLETVLPMPTGTTVLAAADNKIAVLDIVAG-KPLHMIQSH 267
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
KTVTSL LAS G RL+S +LD H KI+E T
Sbjct: 268 QKTVTSLSLASDGTRLLSGALDGHLKIHETT 298
Score = 171 (65.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 61/191 (31%), Positives = 86/191 (45%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLP----SGGIFVTGG-G 104
SP V+S S D+TV ++D S + + S V H V + +P S G V+G
Sbjct: 147 SPSDPTCVLSASDDRTVRLWDLPSENSIKSFVGHSDYVRTAAFMPGSLASSGSLVSGSYD 206
Query: 105 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT 164
V +WD G+ F T L + +G + A+ D+ +
Sbjct: 207 RTVRLWDPRMEGRSAMTFKMGAPLETVLPMPTG--TTVLAAADNKIAV------------ 252
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
LD+ GK LH H KTVTSL LAS G RL+S +LD H KI+E ++ V
Sbjct: 253 --LDIV------AGKPLHMIQSHQKTVTSLSLASDGTRLLSGALDGHLKIHETTGWNVVA 304
Query: 225 TLDYPSPVLSI 235
Y SP+LS+
Sbjct: 305 GFKYQSPILSL 315
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 223 (83.6 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 46/117 (39%), Positives = 72/117 (61%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP-VMSVNHGSPVESVLCLPSGGIFV 100
+DYVR T S +S+ ++SG YD T+ ++DTR DP VMS +HG ++ VL + SG +
Sbjct: 166 EDYVR--TASWMSATRLVSGGYDGTIRLWDTRIADPEVMSFSHGEAIDVVLPMQSGSTVI 223
Query: 101 TGGGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
+ GG + +WD++ G + K + H K++T L + S RL+S LD H KIY ++
Sbjct: 224 SAGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNIS 280
Score = 142 (55.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 159 TVSSFTGGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
TV S GG + +WD++ G + K + H K++T L + S RL+S LD H KIY +
Sbjct: 221 TVIS-AGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNI 279
Query: 218 VNFSPVHTLDYPSPVLSIDVS 238
++ VH + Y P+LS+ +S
Sbjct: 280 SDWKVVHGMKYSGPILSMGLS 300
Score = 57 (25.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 52 PVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VC 108
P ++ +SGS DKTV V+D + ++ H V + + + + GG D +
Sbjct: 133 PYANTTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRL--VSGGYDGTIR 190
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 144
+WD + F+ H + + + G +ISA
Sbjct: 191 LWDTRIADPEVMSFS-HGEAIDVVLPMQSGSTVISA 225
>WB|WBGene00021276 [details] [associations]
symbol:Y23H5B.5 species:6239 "Caenorhabditis elegans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0040035 GO:GO:0006364 GeneTree:ENSGT00390000004228 KO:K14549
EMBL:FO080963 OMA:ADTAYGV RefSeq:NP_490990.2
ProteinModelPortal:Q9N477 SMR:Q9N477 STRING:Q9N477 PaxDb:Q9N477
EnsemblMetazoa:Y23H5B.5 GeneID:171811 KEGG:cel:CELE_Y23H5B.5
UCSC:Y23H5B.5 CTD:171811 WormBase:Y23H5B.5 HOGENOM:HOG000017269
InParanoid:Q9N477 NextBio:872795 Uniprot:Q9N477
Length = 561
Score = 205 (77.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 46/124 (37%), Positives = 67/124 (54%)
Query: 33 VPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLC 92
VP++ +D +R G VS ++ IV++G YD V ++D RS + + ++ PVESVL
Sbjct: 168 VPIIEIQAHEDAIRCGAVSSINDHIVLTGGYDHKVRLWDIRSKEKSLELDCEHPVESVLF 227
Query: 93 LPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152
LP + T G V IWD G +L H+KTVTSL LA+ L+SA +D
Sbjct: 228 LPGEQLIATAAGPIVKIWDTTTGRQLT-ALQAHYKTVTSLRLATNSTCLLSAGIDRRVNA 286
Query: 153 YEMT 156
+ T
Sbjct: 287 FRTT 290
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228
V IWD G +L H+KTVTSL LA+ L+SA +D + N+S +++
Sbjct: 242 VKIWDTTTGRQLT-ALQAHYKTVTSLRLATNSTCLLSAGIDRRVNAFRTTNYSLINSWSM 300
Query: 229 PSPVLSIDVS 238
PSPVL IDVS
Sbjct: 301 PSPVLDIDVS 310
>SGD|S000004699 [details] [associations]
symbol:UTP15 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0034455 "t-UTP complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0033553 "rDNA heterochromatin" evidence=IDA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0030515 "snoRNA binding"
evidence=IPI] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004699 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
GO:GO:0006351 EMBL:BK006946 EMBL:Z49259 GO:GO:0033553 GO:GO:0032040
GO:GO:0045943 GO:GO:0000462 GO:GO:0034455
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028 KO:K14549
OMA:QFEGHTK OrthoDB:EOG4TB7KP PIR:S54469 RefSeq:NP_013811.1
ProteinModelPortal:Q04305 SMR:Q04305 DIP:DIP-1962N IntAct:Q04305
MINT:MINT-406079 STRING:Q04305 PaxDb:Q04305 PeptideAtlas:Q04305
EnsemblFungi:YMR093W GeneID:855118 KEGG:sce:YMR093W CYGD:YMR093w
NextBio:978467 Genevestigator:Q04305 GermOnline:YMR093W
Uniprot:Q04305
Length = 513
Score = 171 (65.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 47/145 (32%), Positives = 75/145 (51%)
Query: 17 SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPD 76
S+ +V+ + + Y+ L L DYVR + P + +V +GSYD + +YDTRS
Sbjct: 144 SDDRVTRLWDISNAYEPQLELTGAT-DYVRTLSFIPAAPHLVATGSYDGLIRLYDTRSSG 202
Query: 77 --PVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 134
P+ S+NH PVE+V+ + I V+ GG + +WD+ KL + +K VT L
Sbjct: 203 STPIYSLNHDQPVENVIAVSPTQI-VSCGGNNFKVWDLTSNKKLYERGN-FNKAVTCLDY 260
Query: 135 ASG-----GKRLISASLDHHAKIYE 154
LI++SLD H K+++
Sbjct: 261 VENFDSPMQSALIASSLDGHVKVFD 285
>DICTYBASE|DDB_G0283581 [details] [associations]
symbol:utp15 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0006364 "rRNA processing"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0283581 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0030515 eggNOG:COG2319 EMBL:AAFI02000055 GO:GO:0006364
GO:GO:0005732 KO:K14549 RefSeq:XP_639030.1
ProteinModelPortal:Q54QV4 STRING:Q54QV4 PRIDE:Q54QV4
EnsemblProtists:DDB0237554 GeneID:8624158 KEGG:ddi:DDB_G0283581
InParanoid:Q54QV4 OMA:ADTAYGV Uniprot:Q54QV4
Length = 529
Score = 162 (62.1 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 40/137 (29%), Positives = 77/137 (56%)
Query: 35 LMLYSTPQDYVRAGTVSPVSSD-IVISGSYDKTVNVYDTR---SPDPVMSVNHGSPVESV 90
L + +D V T P + D I ++G YD V ++D R + ++++HG+PVE +
Sbjct: 158 LQMVGKHKDKVHCMTRHPTNGDNIWMTGGYDHCVKLWDIRGNKTQSSTITLDHGAPVEDL 217
Query: 91 LCL-PSGGIFVTGGGLDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISASLD 147
+ L SG + ++ GG +WD+L G GK +++ T K++TS+ L++ R I++ LD
Sbjct: 218 IMLGASGTMAISVGGNYFKVWDLLNGSTGKQVYQGTHSMKSLTSIHLSNSKDRFITSGLD 277
Query: 148 HHAKIYE-MTLKTVSSF 163
H +++ + ++S+
Sbjct: 278 HTVRVFSTQSYSLINSY 294
Score = 151 (58.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/189 (26%), Positives = 96/189 (50%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGG--IFVTGGGLDVCI--WDM 112
+ISGS D TV + + + + V H V + P+ G I++TGG D C+ WD+
Sbjct: 138 LISGSNDNTVRTWAIETGEQLQMVGKHKDKVHCMTRHPTNGDNIWMTGG-YDHCVKLWDI 196
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK----TVSSFTGGLD 168
G +KT +S + +LDH A + ++ + T++ GG
Sbjct: 197 RG-----------NKTQSS-----------TITLDHGAPVEDLIMLGASGTMAISVGGNY 234
Query: 169 VCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
+WD+L G GK +++ T K++TS+ L++ R I++ LDH +++ ++S +++
Sbjct: 235 FKVWDLLNGSTGKQVYQGTHSMKSLTSIHLSNSKDRFITSGLDHTVRVFSTQSYSLINSY 294
Query: 227 DYPSPVLSI 235
++ P+LS+
Sbjct: 295 EFSEPLLSL 303
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 140 (54.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/162 (28%), Positives = 83/162 (51%)
Query: 13 WDIPSEAQVSTFTNHTT-IYKVPLM-LYSTPQ---DYVRAGTVSPVSSDIVISGSYDKTV 67
W S++ V+ + T IY+VP + + T + +YV +P SS +V+SGS+D++V
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDESV 187
Query: 68 NVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTC 124
++D R+ V ++ H PV +V G + +T G D V IWD G +
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSL-ITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V + + GK ++S++LD+ K+++ KT+ + G
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQG 288
Score = 55 (24.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCL-----ASGGKRLISASLDHHAKIYEMVNFSPVHT 225
+WD G GK L ++ H C+ +GGK +IS S D ++ + V +
Sbjct: 274 LWDF-GKGKTLKQYQGHENN--KYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQS 330
Query: 226 LD-YPSPVLSID 236
L+ + V++ D
Sbjct: 331 LEGHTQAVIASD 342
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 155 (59.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/173 (28%), Positives = 83/173 (47%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVT-GGGLDVCIWDMLGGG 116
+++ S D T+ V+D RSP + H +PV V+ P+ G ++ ++ IWD LG
Sbjct: 90 MVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGELISCDRDGNIRIWD-LGEN 148
Query: 117 KLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175
+ H+ T T + SL +AS G L +A+ + ++EM T +S
Sbjct: 149 QCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDASHL----------- 197
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN-FSPVHTLD 227
K + KF H +T + L+S K L + S DH A+++ + + F TLD
Sbjct: 198 ---KPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLD 247
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 158 (60.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 60/230 (26%), Positives = 104/230 (45%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WDI + T H +YS D+ + G ++SGS D+TV +
Sbjct: 370 IRIWDIAQKRVYRLLTGHEQ------EIYSL--DFSKDGKT-------LVSGSGDRTVCL 414
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
+D + + + ++ V +V+ P G F+ G LD I G L+ + H ++V
Sbjct: 415 WDVEAGEQKLILHTDDGVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTLVEQLHGHEESV 473
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
S+ + GK L+S SLD+ K++E L+ VS+ + GG FT H
Sbjct: 474 YSVAFSPDGKYLVSGSLDNTIKLWE--LQCVSNVAPSM------YKEGGICKQTFTGHKD 525
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238
+ S+ ++ GK +IS S D + + + TL + + V+S+ VS
Sbjct: 526 FILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVS 575
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 157 (60.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+ SGS DKTV ++D V +++ V +V P G ++V G LD V +WD G
Sbjct: 373 IASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDG-LYVAAGSLDKTVRVWDTTTG 431
Query: 116 GKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWD 173
+ L H +V S+ A GK L+S SLD K++E+ L + G
Sbjct: 432 YLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGK------ 485
Query: 174 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPV 232
GGK F H V S+CL G ++S S D + ++ + + L + + V
Sbjct: 486 ---GGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSV 542
Query: 233 LSI 235
+S+
Sbjct: 543 ISV 545
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 125 (49.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 44/170 (25%), Positives = 82/170 (48%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFT 164
L + V+ + + GK +++A+LD+ K+++ + K + ++T
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+++S SYD ++DT S + ++ + PV V P+G ++ LD + +WD
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDY 243
Query: 113 LGGGKLLHKFTCHHKTVTSLCL-----ASGGKRLISASLDHHAKIYEM-TLKTVSSFTGG 166
GK L +TCH C+ +GGK ++S S D+ I+ + T + V G
Sbjct: 244 -SKGKCLKTYTCHKNE--KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGH 300
Query: 167 LDVCI 171
DV I
Sbjct: 301 TDVVI 305
Score = 59 (25.8 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCL-----ASGGKRLISASLDHHAKIYEM 217
+WD GK L +TCH C+ +GGK ++S S D+ I+ +
Sbjct: 240 LWDY-SKGKCLKTYTCHKNE--KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
>CGD|CAL0000290 [details] [associations]
symbol:UTP15 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0034455 "t-UTP complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000290 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035690 GO:GO:0032040 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K14549 RefSeq:XP_714453.1 RefSeq:XP_714502.1
ProteinModelPortal:Q59Y40 STRING:Q59Y40 GeneID:3643847
GeneID:3643906 KEGG:cal:CaO19.11092 KEGG:cal:CaO19.3609
eggNOG:NOG307830 Uniprot:Q59Y40
Length = 423
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFV 100
+DY+R+ P S+++++G YD V + D R P V++ + +PVE +L + S + V
Sbjct: 171 EDYIRSVNFIPGDSNLIVTGCYDGNVRILDVRDPHRVVAKFDQENPVEDILAVSSNTL-V 229
Query: 101 TGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYEMT 156
+ GG V IWD L +H+ +K+ T CL++ L+ SLD K+++ T
Sbjct: 230 SAGGPYVKIWD-LNRMSQIHQLNNFNKSTT--CLSNTHTNGLMVGSLDSTIKVFDYT 283
>UNIPROTKB|Q59Y40 [details] [associations]
symbol:CaO19.11092 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000290 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035690 GO:GO:0032040 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K14549 RefSeq:XP_714453.1 RefSeq:XP_714502.1
ProteinModelPortal:Q59Y40 STRING:Q59Y40 GeneID:3643847
GeneID:3643906 KEGG:cal:CaO19.11092 KEGG:cal:CaO19.3609
eggNOG:NOG307830 Uniprot:Q59Y40
Length = 423
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFV 100
+DY+R+ P S+++++G YD V + D R P V++ + +PVE +L + S + V
Sbjct: 171 EDYIRSVNFIPGDSNLIVTGCYDGNVRILDVRDPHRVVAKFDQENPVEDILAVSSNTL-V 229
Query: 101 TGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYEMT 156
+ GG V IWD L +H+ +K+ T CL++ L+ SLD K+++ T
Sbjct: 230 SAGGPYVKIWD-LNRMSQIHQLNNFNKSTT--CLSNTHTNGLMVGSLDSTIKVFDYT 283
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 152 (58.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 62/209 (29%), Positives = 93/209 (44%)
Query: 18 EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDP 77
+A+ N PL LYS+ + G+++ + +SG + + V T S +
Sbjct: 685 DARRFVLNNRHLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSG-WSQLPKVEQTWSAEQ 743
Query: 78 VMSVNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 136
NH PVESV+ P G V+G D V IWD G+LL H TV SL +
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDP-ATGELLQTLDGHSGTVESLAFSP 802
Query: 137 GGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDVCIWDMLGG--GKLLHKFTCHHKTVTS 193
GK L S S D+ +++ T + + +F G IW + GK L + T+
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHPH-SIWSVAFAPDGKELASAS-DDSTIKI 860
Query: 194 LCLASGGKRLISASLDHHAKIYEMVNFSP 222
LA+G + +LD H++ V FSP
Sbjct: 861 WDLATGE---LQQTLDSHSQSVRSVAFSP 886
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT 101
D+V + SP + SG YD T+ ++D+ + + + ++ H ++SV+ P G + +
Sbjct: 1129 DWVDSVAFSPDGKQLA-SGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLAS 1187
Query: 102 GGGLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G +WD G+LL F H K V S+ + GK L S+S K+++
Sbjct: 1188 GSYDQTAKLWDP-ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 48/184 (26%), Positives = 82/184 (44%)
Query: 47 AGTVSPV--SSD--IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT 101
+GTV + S D ++ SGSYD T++++D+ + + + + H + SV P G +
Sbjct: 792 SGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELAS 851
Query: 102 GGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+ IWD L G+L H ++V S+ + GK L S+SLD K++ +
Sbjct: 852 ASDDSTIKIWD-LATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 161 SSFTGGLDVCIWDMLGG--GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218
G + + GK L + K L + G+ L +L+ H++ V
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGS--EKNTVKLWNPATGELL--QTLEGHSQSVRSV 966
Query: 219 NFSP 222
FSP
Sbjct: 967 AFSP 970
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIW 110
+S+ V +GS D+TV ++D + V + H V S L + G ++ G +D + IW
Sbjct: 545 NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSS-LAFSACGRYLASGSVDHNIIIW 603
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
D L G L+ H TVT++ + G L +A LD++ +++
Sbjct: 604 D-LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 118 (46.6 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 59 ISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGG 116
+S SYDKT ++ T S + + V H S V+ V P+ TG V +WD + G
Sbjct: 508 VSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG- 566
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
+ + T H +V+SL ++ G+ L S S+DH+ I++++
Sbjct: 567 QSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS 606
Score = 75 (31.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+G +D + IWD L G L+ H TVT++ + G L +A LD++ +++ F
Sbjct: 593 SGSVDHNIIIWD-LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD---FH 648
Query: 222 PVHTLDYPSPVLSI 235
V T DY S +++
Sbjct: 649 KV-TEDYISNHITV 661
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 121 (47.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 51 SPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD-- 106
SP + VISG D +++Y +T + + +G S+ P G ++ G +D
Sbjct: 136 SPCNK-YVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGK-YIASGAIDGI 193
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
+ I+D+ GK++ H V SLC + + L++AS D H K+Y++T V G
Sbjct: 194 ITIFDV-AAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSG 252
Score = 90 (36.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+G +D + I+D+ GK++ H V SLC + + L++AS D H K+Y++ +
Sbjct: 187 SGAIDGIITIFDV-AAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSD 245
Query: 222 PVHTLD-YPSPVLSIDVS 238
V TL + S VL + S
Sbjct: 246 VVGTLSGHASWVLCVAFS 263
Score = 81 (33.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 99 FVTGGGLD--VCIWDMLGGG--KLLHKFTCHHKTVTSLCLASGGKRLISASLD 147
F+ GGLD V +WD+ KL HK H V S+ ++S G+ + S+SLD
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLD 106
Score = 60 (26.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
K +S + V IWD K LH F H V + + G ++ SAS D IY
Sbjct: 267 KHFASSSSDNSVKIWDT-SERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT 225
H V + + GK S+S D+ KI++ +HT
Sbjct: 253 HASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHT 291
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 133 (51.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S +V T T H + ++ + + T S D +I+GS+D TV V+D
Sbjct: 203 LWDIQSGEEVVTLTGH--LAEIISLSFDT-------------SGDRIITGSFDHTVVVWD 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S L + +TG C +WD G K + T H +
Sbjct: 248 ASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG-KCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
C GK + +AS D A++Y T K ++ G
Sbjct: 307 LDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Score = 103 (41.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWD 111
S +V +GS D T ++D +S + V+++ H + + S+ SG +TG D V +WD
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGS-FDHTVVVWD 247
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGG---- 166
G K+ H H ++S + +++ S+D +++ T K V++ TG
Sbjct: 248 ASTGRKV-HTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEI 306
Query: 167 LDVCIWDMLG 176
LD C +D G
Sbjct: 307 LDSC-FDYTG 315
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
K + K H ++ + G RL++ S D A+I+++
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD-VCIWD 111
SS ++++G D VN++ P+ ++S+ H S ++SV S G+ G + +WD
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 87
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK----TVSSFTGGL 167
L K++ T H S+ G+ S SLD + KI+++ K T T G+
Sbjct: 88 -LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Query: 168 DV 169
+V
Sbjct: 147 NV 148
Score = 76 (31.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
+GG D V +WD L GKLLH+F H + SL L + S D K +++ F
Sbjct: 160 SGGEDNVVKVWD-LTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETF 217
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 140 (54.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLG 114
+V SGS D++ ++DTRS H PV SV C + GG+D + +WD+
Sbjct: 162 LVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSV-CFSDASDQLITGGIDNVIRVWDIRN 220
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
L+ H T+TS ++ G L+S S+D+ KI+++
Sbjct: 221 QEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDI 261
Score = 95 (38.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
TGG+D + +WD+ L+ H T+TS ++ G L+S S+D+ KI+++ ++
Sbjct: 206 TGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYA 265
Query: 222 P 222
P
Sbjct: 266 P 266
Score = 85 (35.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCI 109
S+ + + DK++ V+D+ + + + H V S C P+ G V G D I
Sbjct: 117 SNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNS--CCPARRGPPLVASGSDDRSARI 174
Query: 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+D G H F H VTS+C + +LI+ +D+ +++++
Sbjct: 175 FDTRSKGST-HLFQ-HKYPVTSVCFSDASDQLITGGIDNVIRVWDI 218
Score = 78 (32.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/103 (28%), Positives = 44/103 (42%)
Query: 60 SGSYDKTV---NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG 116
SG DK + NVY V+ + G+ +E S I+ + +WD G
Sbjct: 79 SGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDS-NKG 137
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMTLK 158
+L+ + H V S C A G L+ S S D A+I++ K
Sbjct: 138 ELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSK 180
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 133 (51.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 43/150 (28%), Positives = 64/150 (42%)
Query: 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
++ LWD+ V FT H + A P + + SGS D +
Sbjct: 81 VIKLWDLEESKMVRAFTGH--------------RSNCSAVEFHPFG-EFLASGSSDTNLR 125
Query: 69 VYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCH 125
V+DTR + + H + ++ P G +V GGLD V +WD L GKLLH+F CH
Sbjct: 126 VWDTRKKGCIQTYKGHTRGISTIEFSPDGR-WVVSGGLDNVVKVWD-LTAGKLLHEFKCH 183
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ SL L + S D K +++
Sbjct: 184 EGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 98 (39.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 29/121 (23%), Positives = 59/121 (48%)
Query: 49 TVSPVSSDIVISGSYDKTVNVYDT-RSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD- 106
++ +S ++++G D VN++ ++ P+ H SPV+SV S + V G
Sbjct: 22 SIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSV-AFNSEEVLVLAGASSG 80
Query: 107 -VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-TVSSFT 164
+ +WD L K++ FT H +++ G+ L S S D + ++++ K + ++
Sbjct: 81 VIKLWD-LEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK 139
Query: 165 G 165
G
Sbjct: 140 G 140
Score = 95 (38.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GGLD V +WD L GKLLH+F CH + SL L + S D K +++ F
Sbjct: 159 SGGLDNVVKVWD-LTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFE 217
Query: 222 PVHT 225
+ T
Sbjct: 218 LIGT 221
Score = 84 (34.6 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 30/136 (22%), Positives = 60/136 (44%)
Query: 31 YKVPLM-LYSTPQDYVRAGTVSPVSSD-------IVISGSYDKTVNVYDTRSPDPVMS-V 81
YKV L + T G SPV S +V++G+ + ++D V +
Sbjct: 38 YKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFT 97
Query: 82 NHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H S +V P G +G ++ +WD G + + H + ++++ + G+
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG-CIQTYKGHTRGISTIEFSPDGRW 156
Query: 141 LISASLDHHAKIYEMT 156
++S LD+ K++++T
Sbjct: 157 VVSGGLDNVVKVWDLT 172
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 113 (44.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 43 DYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSV------NHGSPVESVLCLPS 95
D V A +P+ ++DI++S S DK++ ++ D V H VE V+ L S
Sbjct: 16 DMVTA-IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV-LSS 73
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G F G D + +WD L G +F H K V S+ + ++++SAS D K++
Sbjct: 74 DGQFALSGSWDGELRLWD-LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Score = 110 (43.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/123 (27%), Positives = 63/123 (51%)
Query: 42 QDYVRAGTVSPVS-SDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIF 99
+D+V SP + ++S S+DKTV V++ + ++ H V +V P G +
Sbjct: 150 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 209
Query: 100 VTGG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL 157
+GG G+ V +WD L GK L+ + + +LC S + + A+ +H KI+++
Sbjct: 210 ASGGKDGV-VLLWD-LAEGKKLYSLEAN-SVIHALCF-SPNRYWLCAATEHGIKIWDLES 265
Query: 158 KTV 160
K++
Sbjct: 266 KSI 268
Score = 64 (27.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG D V +WD L GK L+ + + +LC S + + A+ +H KI+++ + S
Sbjct: 211 SGGKDGVVLLWD-LAEGKKLYSLEAN-SVIHALCF-SPNRYWLCAATEHGIKIWDLESKS 267
Query: 222 PVHTL 226
V L
Sbjct: 268 IVEDL 272
Score = 38 (18.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 12 LWDIPSEAQVSTFTNHT 28
LWD+ + F HT
Sbjct: 89 LWDLAAGVSTRRFVGHT 105
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 53/160 (33%), Positives = 77/160 (48%)
Query: 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG 103
+ A + SPVSS ++SGS D T ++D + P+ ++ H S V +V P+G + TG
Sbjct: 151 ILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGS 210
Query: 104 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLA------SGGKRLISASLDHHAKIYEM 155
+D V IWD G L H K +TSL SG RL SAS D +I+++
Sbjct: 211 -MDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDV 269
Query: 156 TLKT---VSSFTGGLDVCI-WDMLGGGKLLHKFTCHHKTV 191
K V S G C+ W G GK+ + H +T+
Sbjct: 270 ISKRADIVLSGHKGSVTCVRWG--GTGKIYT--SSHDRTI 305
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 101 (40.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113
S ++ S S D+TV ++DT + ++ H V SV+ + + V IWD
Sbjct: 308 SRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDT- 366
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G G L H H V S+ + + L SAS D KI++
Sbjct: 367 GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Score = 84 (34.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 211
I+ + ++S + V IWD G G L H H V S+ + + L SAS D
Sbjct: 428 IFSHDSQLLASASDDSTVKIWDT-GTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRT 486
Query: 212 AKIYEMVNFSPVHTLD-YPSPVLSIDVS 238
+I++ S HTL+ + S V S+ S
Sbjct: 487 VRIWDTEKGSHKHTLEGHSSLVTSVSFS 514
Score = 82 (33.9 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 34/114 (29%), Positives = 50/114 (43%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT 101
D VR+ S S ++ S S D TV ++DT + ++ H V SV+ + +
Sbjct: 339 DLVRSVIFSH-DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLAS 396
Query: 102 GGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
V IWD G G L H H V S+ + + L SAS D KI++
Sbjct: 397 ASDDSTVKIWDT-GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Score = 74 (31.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLD 209
I+ + ++S + V IWD G HK T H VTS+ + + L SAS D
Sbjct: 470 IFSHDSRLLASASDDRTVRIWDTEKGS---HKHTLEGHSSLVTSVSFSHDSRLLASASND 526
Query: 210 HHAKIYEMVNFSPVHTLDYPSPV 232
+I+++ S HT D + +
Sbjct: 527 QTVRIWDIEARSLQHTFDLDATI 549
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 137 (53.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 36/114 (31%), Positives = 61/114 (53%)
Query: 45 VRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGG 103
V A V V S+++ S S D T+ V+D+RS D + ++ P+ +V G +F+ G
Sbjct: 138 VNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFI--G 195
Query: 104 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
G+D + IWD L H H +TSL ++ G L+S S+D+ +I+++
Sbjct: 196 GIDGAIKIWD-LRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDV 248
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 135 (52.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN----HGSPVESVLCLPSGGI 98
D +++ SP +SD + +GS+D TV+++D R+ PV+S + H + S LC + G+
Sbjct: 153 DSIQSSDFSP-TSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNI-SCLCYSASGL 210
Query: 99 FVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE-MT 156
+G +C+W L + H V SL + +L SA K+++ +T
Sbjct: 211 LASGSWDKTICVWKPTTNNLPL-QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLT 269
Query: 157 LKTVSSFTGGLDV---CIWDMLGGGKLL 181
K + + G LDV CI+ GKLL
Sbjct: 270 GKCLETLKGMLDVAHACIFTP--DGKLL 295
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 127 (49.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 42/124 (33%), Positives = 60/124 (48%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 100 LFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH 158
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G+D V +WD+ +LL + H V L G LI+AS D K
Sbjct: 159 PSGTC-IAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 216
Query: 152 IYEM 155
I ++
Sbjct: 217 ILDL 220
Score = 84 (34.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G F
Sbjct: 23 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRA-HTATVRSVHFCSDGQSF 80
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
VT V +W K L + H V + G+ ++SAS D K+++
Sbjct: 81 VTASDDKTVKVW-ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Score = 71 (30.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD+ +LL + H V L G LI+AS D KI +++ +
Sbjct: 168 GMDNTVKVWDVRTH-RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL 226
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 227 YTLHGHQGPATTVAFS 242
Score = 46 (21.3 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV-H--TLD 227
I D++ G +LL+ H T++ + G+ S D +++ NF V H
Sbjct: 217 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFDIVDHGEVTK 274
Query: 228 YPSPVLSIDVSM 239
P P ++ SM
Sbjct: 275 VPRPPATLASSM 286
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 128 (50.1 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 42/124 (33%), Positives = 61/124 (49%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 169 LFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 227
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG V G+D V +WD+ +LL + H V +L G L++AS D K
Sbjct: 228 PSGTC-VAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 285
Query: 152 IYEM 155
I ++
Sbjct: 286 ILDL 289
Score = 87 (35.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G F
Sbjct: 92 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNIKGESTVFRA-HTATVRSVHFCSDGQSF 149
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
VT + +W K L + H V + G+ ++SAS D K+++ T
Sbjct: 150 VTASDDKTIKVWST-HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Score = 71 (30.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD+ +LL + H V +L G L++AS D KI +++ +
Sbjct: 237 GMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL 295
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 296 YTLHGHQGPATTVAFS 311
Score = 44 (20.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228
I D++ G +LL+ H T++ + G+ S D +++ NF +DY
Sbjct: 286 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFD---VIDY 338
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 123 (48.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 138 LFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G+D V +WD +L+ + H V +L G LI+AS D K
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDTRTH-RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLK 254
Query: 152 IYEM 155
I ++
Sbjct: 255 ILDL 258
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G +
Sbjct: 61 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRA-HTATVRSVHFCSDGQLL 118
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
VT V +W + L T H V + G+ ++SAS D K+++ T
Sbjct: 119 VTASDDKTVKVWST-HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD +L+ + H V +L G LI+AS D KI +++ +
Sbjct: 206 GMDNTVKVWDTRTH-RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLL 264
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 265 YTLHGHQGPATTVAFS 280
Score = 48 (22.0 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228
I D++ G +LL+ H T++ + G+ S D +++ NF T+DY
Sbjct: 255 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFD---TVDY 307
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 127 (49.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/124 (33%), Positives = 60/124 (48%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 138 LFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH 196
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G+D V +WD+ +LL + H V L G LI+AS D K
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Query: 152 IYEM 155
I ++
Sbjct: 255 ILDL 258
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G F
Sbjct: 61 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRA-HTATVRSVHFCSDGQSF 118
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
VT V +W K L + H V + G+ ++SAS D K+++
Sbjct: 119 VTASDDKTVKVW-ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD+ +LL + H V L G LI+AS D KI +++ +
Sbjct: 206 GMDNTVKVWDVRTH-RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL 264
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 265 YTLHGHQGPATTVAFS 280
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV-H--TLD 227
I D++ G +LL+ H T++ + G+ S D +++ NF V H
Sbjct: 255 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFDIVDHGEVTK 312
Query: 228 YPSPVLSIDVSM 239
P P ++ SM
Sbjct: 313 VPRPPATLASSM 324
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 111 (44.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 165 NSDMQILTSSGDGTCALWDVESGQMLQSF-HGHAAD-VLCLDLAPSETGNTFVSGGCDKK 222
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
C+WDM G + + F H + S+ G S S D ++Y++
Sbjct: 223 ACVWDMRTG-QCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYDL 270
Score = 62 (26.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
+WD+L G ++ F H V++L ++ G S S DH +I+
Sbjct: 311 VWDVLKGARVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRIW 354
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 60 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 117
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 178 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 237
Query: 173 DMLG--GGK 179
GGK
Sbjct: 238 ANFSVTGGK 246
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 116 (45.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 43 DYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSV------NHGSPVESVLCLPS 95
D V A +P+ +SDI+++ S DK++ ++ D V H VE V+ L S
Sbjct: 16 DIVTA-IATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV-LSS 73
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G F G D + +WD L G+ +F H K V S+ ++ ++++SAS D K++
Sbjct: 74 DGQFALSGSWDGELRLWD-LATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 54 (24.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG D + +WD L GK L+ + SLC S + + A+ ++ +I+++ + S
Sbjct: 210 SGGKDGVILLWD-LAEGKKLYSLEAG-SIIHSLCF-SPNRYWLCAATENSIRIWDLESKS 266
Query: 222 PVHTL 226
V L
Sbjct: 267 VVEDL 271
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 132 (51.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGG 116
+++ S D TV +++TR+ S NH SPV V+ P+ G ++ + +WD L
Sbjct: 90 MVTSSEDGTVKIWETRTGTIQRSYNHQSPVNDVVIHPNQGEIISCDRAGTIRLWD-LADN 148
Query: 117 KLLHKFTCHHK-TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175
K + +V+SL +A+ G L +A+ + ++ TL GL+ I
Sbjct: 149 KCTSEMVPEEDVSVSSLTVATDGSLLCAAN--NRGNVFVWTLSQ------GLERTI---- 196
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
+ +F+ H + +T + L+ K+L + S DH AKI+E V+ P
Sbjct: 197 --ATAMTQFSAHDQYITRVLLSPDVKKLATCSADHTAKIWE-VDVEP 240
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 104 (41.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 40/142 (28%), Positives = 62/142 (43%)
Query: 30 IYKVP--LMLY--STPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85
IY++P MLY S Q + TV+ I I S + V++ +S V+
Sbjct: 280 IYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHY 339
Query: 86 PVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 143
S L S G + G D + +WDM G + FT H V+ LC + G L S
Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKVWDM-NSGFCIVTFTQHTSAVSGLCFSKRGNVLFS 398
Query: 144 ASLDHHAKIYEMT-LKTVSSFT 164
+SLD + +++ + +FT
Sbjct: 399 SSLDGSVRAWDLIRYRNFRTFT 420
Score = 79 (32.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 168 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP-VHTL 226
++ +W + G +LL H V+SL S G L S S D +I+++ + S V L
Sbjct: 448 EIFMWSVQTG-QLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPL 506
Query: 227 DYPSPVLSI 235
PS VLS+
Sbjct: 507 PIPSDVLSL 515
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 173 DMLG--GGK 179
GGK
Sbjct: 264 ANFSVTGGK 272
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 173 DMLG--GGK 179
GGK
Sbjct: 264 ANFSVTGGK 272
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 173 DMLG--GGK 179
GGK
Sbjct: 264 ANFSVTGGK 272
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 173 DMLG--GGK 179
GGK
Sbjct: 264 ANFSVTGGK 272
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T I+ V L +YV +P S++
Sbjct: 86 HKLGISDVA-WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D ++ + ++ H PV +V G + V+ +C IWD G
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 173 DMLG--GGK 179
GGK
Sbjct: 264 ANFSVTGGK 272
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 127 (49.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/124 (33%), Positives = 61/124 (49%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 138 LFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G+D V +WD+ +LL + H V +L G L++AS D K
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 254
Query: 152 IYEM 155
I ++
Sbjct: 255 ILDL 258
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G F
Sbjct: 61 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRA-HTATVRSVHFCSDGQSF 118
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
VT V +W K L + H V + G+ ++SAS D K+++ T
Sbjct: 119 VTASDDKTVKVWST-HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD+ +LL + H V +L G L++AS D KI +++ +
Sbjct: 206 GMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL 264
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 265 YTLHGHQGPATTVAFS 280
Score = 43 (20.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
I D++ G +LL+ H T++ + G+ S D +++ NF V
Sbjct: 255 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFDIV 305
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 131 (51.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/189 (25%), Positives = 91/189 (48%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T ++++ L +YV +P S++
Sbjct: 113 HKLGISDVA-WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP-QSNL 170
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V ++D R+ + ++ H PV +V G + V+ +C IWD G
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLD--VCIW 172
L + V+ + + GK +++A+LD+ K+++ + K + ++TG + CI+
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 290
Query: 173 DMLG--GGK 179
GGK
Sbjct: 291 ANFSVTGGK 299
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
+WD+ S T T HT D V A VS SS V+S +YD+T+ ++D
Sbjct: 293 VWDVSSGRVRHTLTGHT--------------DKVCAVDVSKFSSRHVVSAAYDRTIKLWD 338
Query: 72 TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTV 129
+V S ++ CL G+ V G +D + +WD + GKLL + H V
Sbjct: 339 LHKGYCTNTVLFTSNCNAI-CLSIDGLTVFSGHMDGNLRLWD-IQTGKLLSEVAGHSSAV 396
Query: 130 TSLCLASGGKRLISASLDHHAKIYE 154
TS+ L+ G R++++ D+ +++
Sbjct: 397 TSVSLSRNGNRILTSGRDNVHNVFD 421
Score = 84 (34.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 21/105 (20%), Positives = 53/105 (50%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111
+S + +G D+ V ++DT S + S+ + G+ ++ + + + ++ +WD
Sbjct: 236 NSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWD 295
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKR-LISASLDHHAKIYEM 155
+ G++ H T H V ++ ++ R ++SA+ D K++++
Sbjct: 296 V-SSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 339
Score = 80 (33.2 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 17/64 (26%), Positives = 38/64 (59%)
Query: 155 MTLKTVSSFTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
+++ ++ F+G +D + +WD + GKLL + H VTS+ L+ G R++++ D+
Sbjct: 359 LSIDGLTVFSGHMDGNLRLWD-IQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 417
Query: 213 KIYE 216
+++
Sbjct: 418 NVFD 421
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 125 (49.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + + S HG V V
Sbjct: 138 LFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFH 196
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G+D V +WD +LL + H V +L G LI+AS D K
Sbjct: 197 PSGTC-IAAAGMDNTVKVWDARTH-RLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLK 254
Query: 152 IYEM 155
I ++
Sbjct: 255 ILDL 258
Score = 84 (34.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIF 99
+D V SP S ++ SGS DKTV ++ + + V H + V SV G
Sbjct: 61 KDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRA-HTATVRSVHFCSDGQSL 118
Query: 100 VTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
VT V +W + L T H V + G+ ++SAS D K+++ T
Sbjct: 119 VTASDDKTVKVWST-HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Score = 70 (29.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 166 GLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
G+D V +WD +LL + H V +L G LI+AS D KI +++ +
Sbjct: 206 GMDNTVKVWDARTH-RLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLL 264
Query: 224 HTLD-YPSPVLSIDVS 238
+TL + P ++ S
Sbjct: 265 YTLHGHQGPATTVAFS 280
Score = 43 (20.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
I D++ G +LL+ H T++ + G+ S D +++ NF V
Sbjct: 255 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFDIV 305
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 121 (47.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP ++ S S DKTV ++D S + + S HG V
Sbjct: 139 LFSLSQHINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH 197
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + G D V +WD+ +LL + H V SL G LI+AS D K
Sbjct: 198 PSGTC-IAAAGTDKTVKVWDVRMN-RLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLK 255
Query: 152 IYEM 155
I ++
Sbjct: 256 ILDL 259
Score = 44 (20.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
I D+L G +LL+ H T + + G S D +++ NFS
Sbjct: 256 ILDLLEG-RLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK-TNFS 304
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL LY+ V P +S+ + +GS DKTV ++ TR V + H PV ++
Sbjct: 430 PLRLYAGHLSDVDCVKFHP-NSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAF 488
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD+ GG L H T++SL + + SAS+D+
Sbjct: 489 SPNGK-YLASAGEDQRLKLWDLASGG-LFKDLRGHTDTISSLSFSQDSSLVASASMDNTV 546
Query: 151 KIYEMTLKTVSSFTGGLDVCIWDMLG 176
+++++ S+ T G C +++G
Sbjct: 547 RVWDIRNAHGSAPTDG---CSSELIG 569
Score = 93 (37.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 41/148 (27%), Positives = 63/148 (42%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V WD+ S FTN T +Y+ ++ P V VSP S + S+D+T +
Sbjct: 378 VRYWDLKS------FTN-TVLYRG----HAYP---VWDVDVSPCSL-YFSTASHDRTARL 422
Query: 70 YDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHK 127
+ P+ + H S V+ V P+ TG V +W G + FT H
Sbjct: 423 WSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASV-RLFTGHRG 481
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEM 155
V +L + GK L SA D K++++
Sbjct: 482 PVLTLAFSPNGKYLASAGEDQRLKLWDL 509
Score = 72 (30.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+WD+ GG L H T++SL + + SAS+D+ +++++ N
Sbjct: 506 LWDLASGG-LFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 130 (50.8 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYK-VPLMLYSTPQ---DYVRAGTVSPVSSDI 57
H L + +A W S VS + T I++ V + T + +YV +P SS +
Sbjct: 128 HKLGVNDIA-WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-L 185
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG 114
V+SGS+D++V ++D ++ + ++ H PV +V G + +G GL V IWD
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWDTAN 244
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG--GLDVCI 171
G + + V + + GK +++++LD K+++ + KT+ +TG CI
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Query: 172 WDMLG--GGK 179
+ GGK
Sbjct: 305 FANFSVTGGK 314
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 130 (50.8 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 51/190 (26%), Positives = 91/190 (47%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYK-VPLMLYSTPQ---DYVRAGTVSPVSSDI 57
H L + +A W S VS + T I++ V + T + +YV +P SS +
Sbjct: 128 HKLGVNDIA-WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-L 185
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDMLG 114
V+SGS+D++V ++D ++ + ++ H PV +V G + +G GL V IWD
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWDTAN 244
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG--GLDVCI 171
G + + V + + GK +++++LD K+++ + KT+ +TG CI
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Query: 172 WDMLG--GGK 179
+ GGK
Sbjct: 305 FANFSVTGGK 314
>TAIR|locus:2082891 [details] [associations]
symbol:RID3 "AT3G49180" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL132956 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 UniGene:At.46259 UniGene:At.48755
UniGene:At.72728 EMBL:BT004624 EMBL:AK227986 IPI:IPI00544514
PIR:T45823 RefSeq:NP_190487.1 ProteinModelPortal:Q9M3B4 SMR:Q9M3B4
IntAct:Q9M3B4 STRING:Q9M3B4 PRIDE:Q9M3B4 DNASU:824079
EnsemblPlants:AT3G49180.1 GeneID:824079 KEGG:ath:AT3G49180
TAIR:At3g49180 InParanoid:Q9M3B4 OMA:SEDRTCK PhylomeDB:Q9M3B4
ProtClustDB:CLSN2684231 Genevestigator:Q9M3B4 Uniprot:Q9M3B4
Length = 438
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 40/159 (25%), Positives = 78/159 (49%)
Query: 86 PVESVLCLPSG--GIFVTGGGL--DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141
PVE + L + G ++ GGG+ D+ +W++ GKLL K+ H+++VT L + L
Sbjct: 77 PVEPIKALAANNEGTYLVGGGISGDIYLWEV-ATGKLLKKWHGHYRSVTCLVFSGDDSLL 135
Query: 142 ISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201
+S S D +++ + ++ F +++ H F H +VT + + GG
Sbjct: 136 VSGSQDGSIRVWSL-IRLFDDFQRQQGNTLYE--------HNFNEHTMSVTDIVIDYGGC 186
Query: 202 R--LISASLDHHAKIYEMVNFSPVHTLDYPSPV--LSID 236
+IS+S D K++ + + + +PS + L++D
Sbjct: 187 NAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALD 225
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 41/157 (26%), Positives = 69/157 (43%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI + +V T H+ ++ + ++T S D +I+GS+D TV V+D
Sbjct: 203 LWDIQNGEEVYTLRGHSA--EIISLSFNT-------------SGDRIITGSFDHTVVVWD 247
Query: 72 TRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S + +TG C +WD G K + T H +
Sbjct: 248 ADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG-KCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTG 165
C GK + +AS D A+I+ T K ++ G
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEG 343
Score = 99 (39.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 35/148 (23%), Positives = 64/148 (43%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWD S +++T H + V + ++ P Y D + +GS+DKT ++
Sbjct: 118 LWDTASGEELNTLEGHRNV--VYAIAFNNP--Y----------GDKIATGSFDKTCKLWS 163
Query: 72 TRSPDPVMSVNHGSPVESVLCL---PSGGIFVTGGGLDVC--IWDMLGGGKLLHKFTCHH 126
+ G E ++CL P + TG +D +WD+ G ++ + H
Sbjct: 164 VET-GKCYHTFRGHTAE-IVCLSFNPQSTLVATGS-MDTTAKLWDIQNGEEV-YTLRGHS 219
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYE 154
+ SL + G R+I+ S DH +++
Sbjct: 220 AEIISLSFNTSGDRIITGSFDHTVVVWD 247
Score = 98 (39.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 25 TNHTT-IYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN- 82
+NHT ++KV L + P V S I+GSYD+T ++DT S + + ++
Sbjct: 78 SNHTFYLFKV-LKAHILPLTNVALNK----SGSCFITGSYDRTCKLWDTASGEELNTLEG 132
Query: 83 HGSPVESVLCL-PSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H + V ++ P G TG C +W + GK H F H + L
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLSFNPQSTL 191
Query: 141 LISASLDHHAKIYEM 155
+ + S+D AK++++
Sbjct: 192 VATGSMDTTAKLWDI 206
Score = 73 (30.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 140 RLISASLDHHAKIYEMTLKTVSSF--TGGLD-VC-IWDMLGGGKLLHKFTCHHKTVTSLC 195
R ++ + H A+I + S TG +D C +WD G K + T H + C
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG-KCVATLTGHDDEILDSC 310
Query: 196 LASGGKRLISASLDHHAKIY 215
GK + +AS D A+I+
Sbjct: 311 FDYTGKLIATASADGTARIF 330
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 148 HHAKIYEMTLKTVSS--FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203
H A+I ++ T TG D V +WD G K+ + H ++S +
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV-NILIGHCAEISSASFNWDCSLI 276
Query: 204 ISASLDHHAKIYEMVNFSPVHTL 226
++ S+D K+++ N V TL
Sbjct: 277 LTGSMDKTCKLWDATNGKCVATL 299
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVT 101
D + A +SP ++ S + + + V+D + + S H PV + C SGG+ T
Sbjct: 61 DTLTALALSP-DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLAT 119
Query: 102 GGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR--LISASLDHHAKIYEMTLK 158
G V +WD+ GG H F H V+S+ + LIS S D +++++ K
Sbjct: 120 AGADRKVLVWDV-DGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Query: 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218
C+ ++ K H VTS+ L+ G L SA D ++++
Sbjct: 179 NTEK------KCL-------AIMEK---HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLH 222
Query: 219 NFS 221
++S
Sbjct: 223 DYS 225
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 112 (44.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 43 DYVRAGTVSPV-SSDIVISGSYDKTVNVYDTRSPDPVMSV------NHGSPVESVLCLPS 95
D V A +PV +SD++++ S DK++ ++ D V H V+ V+ L S
Sbjct: 16 DMVTA-IATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV-LSS 73
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G F G D + +WD L G+ +F H K V S+ ++ ++++SAS D K++
Sbjct: 74 DGQFALSGSWDGELRLWD-LATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Score = 54 (24.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG D + +WD L GK L+ + SLC S + + A+ ++ +I+++ + S
Sbjct: 210 SGGKDGVILLWD-LAEGKKLYSLEAG-SIIHSLCF-SPNRYWLCAATENSIRIWDLESKS 266
Query: 222 PVHTL 226
V L
Sbjct: 267 VVEDL 271
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ + V + P + V +GS DKT ++D + D V + + H +PV S+
Sbjct: 601 PLRIFAGHLNDVDCVSFHP-NGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAV 659
Query: 93 LPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHH 149
P G TG G+ + +WD +G GK L + H K + SL + G LIS DH
Sbjct: 660 CPDGRWLSTGSEDGI-INVWD-IGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHT 717
Query: 150 AKIYEMTLKT 159
+++++ T
Sbjct: 718 VRVWDLKKAT 727
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 128 (50.1 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVE-SVLCLPSGGIFVT 101
++V + S ++ SGS D+T+ ++D R ++ SP + + +C G V
Sbjct: 141 NFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLE--SPFQVTAVCFGDTGEQVI 198
Query: 102 GGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
GG+D V IWD+ +LH H T+T + L+ G +++ ++D+ ++++
Sbjct: 199 SGGIDNEVKIWDIRKQA-VLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD----- 252
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
V + G + C+ + G + H F K + + G ++ S S D H I+++
Sbjct: 253 VRPYAPG-ERCV-KVFQGHQ--HNF---EKNLLRCAWSPGSDKITSGSADRHVYIWDV 303
Score = 80 (33.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/145 (20%), Positives = 62/145 (42%)
Query: 18 EAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSP-D 76
+A + + T+ + P+M + + P ++++S +D+ + ++ +
Sbjct: 31 KALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHP-EGELLLSSGFDRQIYIWQVYEDCE 89
Query: 77 PVMSVN-HGSPVESVLCLPSGG-IFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 134
VM+++ H V P G IF + WD + G+ +F H V S+
Sbjct: 90 NVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWD-IATGQRQRRFKGHGNFVNSVQG 148
Query: 135 ASGGKRLI-SASLDHHAKIYEMTLK 158
+ G++L+ S S D KI++ K
Sbjct: 149 SRRGQQLLCSGSDDRTIKIWDARKK 173
Score = 76 (31.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/61 (26%), Positives = 36/61 (59%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D V IWD+ +LH H T+T + L+ G +++ ++D+ +++++ ++
Sbjct: 199 SGGIDNEVKIWDIRKQA-VLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYA 257
Query: 222 P 222
P
Sbjct: 258 P 258
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 101 (40.6 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-- 108
S + +I+ISGS D+T+ V++ + + + ++ +G +V C+ V G D
Sbjct: 307 SQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGH-TSTVRCMHLHEKRVVSGSRDATLR 364
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+WD + G+ LH H V C+ G+R++S + D K+++ +T
Sbjct: 365 VWD-IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET 412
Score = 73 (30.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
H ++Y + + +G LD I WD+ G +H T H + + L L+S
Sbjct: 420 HTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDN--ILVS 476
Query: 206 ASLDHHAKIYEMVNFSPVHTLDYPS 230
+ D KI+++ + TL P+
Sbjct: 477 GNADSTVKIWDIKTGQCLQTLQGPN 501
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGG 115
+ +GS D TV ++D R V + + V SV + ++GG D+ +WD L
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWD-LRQ 214
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
KL++ H +VT L L++ G L+S S+D+ +++++
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 97 (39.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 151 KIYEMTLKTVSS--FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA 206
++ +T S +GG+D + +WD L KL++ H +VT L L++ G L+S
Sbjct: 185 QVLSVTFNDTSDQIISGGIDNDIKVWD-LRQNKLIYSMQGHGDSVTGLSLSADGSYLLSN 243
Query: 207 SLDHHAKIYEMVNFSP 222
S+D+ +++++ F+P
Sbjct: 244 SMDNSVRVWDIRPFAP 259
Score = 71 (30.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 33/137 (24%), Positives = 57/137 (41%)
Query: 32 KVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV---NVYDTRSPDPVMSVNHGSPVE 88
+ P+ML S + V P + + SG YD+ + NVY + + G+ +E
Sbjct: 46 QAPIMLLSGHEGEVYCCKFHPNGATLASSG-YDRLILMWNVYGDCENYATLKGHSGAVME 104
Query: 89 SVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLD 147
+F VC+WD G ++ + H V S A G +L + S D
Sbjct: 105 LHYNTDGSLLFSASTDKTVCVWDSETGERV-KRLKGHTSFVNSCFPARRGPQLACTGSDD 163
Query: 148 HHAKIYEMTLK-TVSSF 163
K++++ K +V +F
Sbjct: 164 GTVKLWDIRKKASVHTF 180
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 127 (49.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 57/206 (27%), Positives = 92/206 (44%)
Query: 44 YVRAGTVSPVSSDIVISGSYDKTVNVY-----DTRSPDPV-MSVN-HGSPVESVLCLPSG 96
+V + VSP + D +IS S DKTV V+ D SP S+ H V+ V+ +
Sbjct: 23 FVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV-ISHD 81
Query: 97 GIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G F G D + +WD+ G F H + V S+ +S +++IS S D
Sbjct: 82 GQFALSGSWDNTLRLWDITKGVST-RLFKGHTQDVMSVAFSSDNRQIISGSRD------- 133
Query: 155 MTLKTVSSFTGGLDVCIWDMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213
T+K +W+ LG K L H V+ + + ++S S D+ K
Sbjct: 134 ATIK------------VWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVK 181
Query: 214 IYEMVNFSPVHTL-DYPSPVLSIDVS 238
I+++ +F HTL D+ V ++ +S
Sbjct: 182 IWDIKSFKCNHTLTDHTGYVNTVTIS 207
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFV 100
QD+V SP ++ ++SGS+D V ++D +S ++ +H V +V P G +
Sbjct: 156 QDWVSCIRFSP-NTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCA 214
Query: 101 TGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+GG C+W+ L GK L+K + T+ +L S K +SA+ D I+++ K
Sbjct: 215 SGGKDTFACLWE-LSSGKPLYKLEARN-TINALAF-SPNKYWLSAATDDKIIIWDLLTKQ 271
Query: 160 V 160
V
Sbjct: 272 V 272
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 109 (43.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIW 110
SS ++++G D VN++ P+ ++S+ H S ++SV + + V G + +W
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT-FDASEVLVAAGAASGTIKLW 86
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK----TVSSFTGG 166
D L K++ T H S+ G+ S SLD + KI+++ K T T G
Sbjct: 87 D-LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
Query: 167 LDV 169
++V
Sbjct: 146 VNV 148
Score = 67 (28.6 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
+GG D V +WD L GKLL +F H + SL L + S D K +++ F
Sbjct: 160 SGGEDNIVKVWD-LTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 106 (42.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 37/165 (22%), Positives = 77/165 (46%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWD+ + + + T HT +Y +P S++++SGS+D+TV ++D
Sbjct: 97 LWDVETGSLIKTLIGHT--------------NYAFCVNFNP-QSNMIVSGSFDETVRIWD 141
Query: 72 TRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ + + H PV +V G + V+ +C IWD G + + V
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPV 201
Query: 130 TSLCLASGGKRLISASLDHHAKIYEMT-LKTVSSFTGGLDV--CI 171
+ + + GK ++ +LD+ +++ ++ K + ++TG ++ CI
Sbjct: 202 SFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Score = 92 (37.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 54 SSD--IVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLD-VCI 109
SSD ++S S DKT+ ++D + + + + H + V P + V+G + V I
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
WD+ G K L H VT++ G ++S+S D +I++
Sbjct: 140 WDVTTG-KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 59 (25.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 164 TGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
+G D C+ W+ L KLL K H +TV ++ + S SLD +I+
Sbjct: 260 SGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 55 (24.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 165 GGLD--VCIWDMLGGGKLLHKFTCHHKT---VTSLCLASGGKRLISASLDHHAKIYEM 217
G LD + +W+ + K L +T H ++S + GKR++S S D+ ++E+
Sbjct: 216 GTLDNTLRLWN-ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWEL 272
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 101 (40.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-- 108
S + +I+ISGS D+T+ V++ + + + ++ +G +V C+ V G D
Sbjct: 347 SQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGH-TSTVRCMHLHEKRVVSGSRDATLR 404
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+WD + G+ LH H V C+ G+R++S + D K+++ +T
Sbjct: 405 VWD-IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET 452
Score = 73 (30.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
H ++Y + + +G LD I WD+ G +H T H + + L L+S
Sbjct: 460 HTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDN--ILVS 516
Query: 206 ASLDHHAKIYEMVNFSPVHTLDYPS 230
+ D KI+++ + TL P+
Sbjct: 517 GNADSTVKIWDIKTGQCLQTLQGPN 541
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 98 (39.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
SF G V +W+++ G ++ FTCH TV S ++S + S S D AKI+ S
Sbjct: 1062 SFDG--TVKVWNVITG-RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPS 1118
Query: 222 PVHTL 226
P+H L
Sbjct: 1119 PLHEL 1123
Score = 83 (34.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 26 NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85
N TI + ++ D V S I G+ DKT+ V+ + + ++ + +
Sbjct: 599 NKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIK--A 655
Query: 86 PVESVLC--LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141
+ VLC S ++ +D V IWD G GKL+H + H + V + L
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSVDKKVKIWDS-GTGKLVHTYEEHSEQVNCCHFTNKSNHL 714
Query: 142 ISA--SLDHHAKIYEMTLK 158
+ A S D K++++ K
Sbjct: 715 LLATGSNDSFLKLWDLNQK 733
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 91 (37.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDI-VISGSYDKTVNVY 70
LW +P V T H+T V +++ P+ TVS D+ + S + D +V ++
Sbjct: 256 LWSVPDCNLVHTLRGHST--NVGAIVFH-PK-----ATVSLDKKDVNLASCAADGSVKLW 307
Query: 71 DTRSPDPVMSVN-HGSPVESVLCLPSGGIF-VTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
S +PV + H V V+ PSG T +WD+ ++LH+ H K
Sbjct: 308 SLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQ-EGHSKG 366
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
V + + G + LD +++++
Sbjct: 367 VYDIAFHTDGSLAGTGGLDAFGRVWDL 393
Score = 82 (33.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 164 TG-GLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASG-GKRLISASLDHHAKIYEMVNF 220
TG G + C +WD L K ++ H VT + G L++ + D+ AKI+ +
Sbjct: 423 TGSGDNTCKVWD-LRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGW 481
Query: 221 SPVHTL-DYPSPVLSIDVSM 239
SP+ TL + V+ +D+S+
Sbjct: 482 SPLKTLAGHEGKVMGLDISL 501
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/162 (25%), Positives = 76/162 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WD+ S V T H ++YV + +P S++++SGS+D+ V +
Sbjct: 112 IKIWDVESGKMVKTLKGH--------------KEYVFGVSFNP-QSNLIVSGSFDENVRI 156
Query: 70 YDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H PV V G V G D V IWD G +LL+ +
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVH-FNRDGTLVVSGSYDGTVRIWDTTTG-QLLNTISTED 214
Query: 127 -KTVTSLCLASGGKRLISASLDHHAKI--YEMTLKTVSSFTG 165
K V+ + + GK +++ +LD+ ++ Y K + ++TG
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPV--MSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+V+SGSYD TV ++DT + + +S G V V P+G FV G LD + +W
Sbjct: 186 LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGK-FVLAGTLDNTLRLWSY 244
Query: 113 LGGGKLLHKFTCHHKT---VTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLD 168
K L +T H + S + GK +++ S D+ IY + T + V + G D
Sbjct: 245 NNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHED 304
Query: 169 VCI 171
V +
Sbjct: 305 VVL 307
>ASPGD|ASPL0000061266 [details] [associations]
symbol:AN10017 species:162425 "Emericella nidulans"
[GO:2000158 "positive regulation of ubiquitin-specific protease
activity" evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0051285 "cell cortex of cell tip"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
OMA:MTLATIR InterPro:IPR021772 Pfam:PF11816
EnsemblFungi:CADANIAT00002634 Uniprot:C8VQL1
Length = 1010
Score = 131 (51.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 11 ALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVS-SDIVISGSYDKTVNV 69
AL S+ V + H+ VP + DYV+A SP S S V SG D VN+
Sbjct: 95 ALVTASSDTTVRLWRPHSESTDVPEPI-GKHTDYVKA-LASPGSHSTWVASGGLDHKVNL 152
Query: 70 YDTRSPDPVMSVNHG----SPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFT 123
+D ++S+ S SV L + + GG + V +WD G KL+ KF
Sbjct: 153 WDLNGNGQILSIGASGAERSAKGSVYALGAVSSVIASGGPEKLVRVWDPKSG-KLITKFV 211
Query: 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTGGLDVCIWDM 174
H + + + S G +++AS D KI+ +T + + + T D +W +
Sbjct: 212 GHTDNIRDILINSDGDTIMTASSDQTVKIWSLTAGRCMHTLTMHND-SVWSL 262
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 190 TVTSLCLASGGKRLISASLDH-HAKIYEMVNFSPVHTLDYPSPVLSIDVS 238
T S+ LA+ L S+ L+H H+ Y + SP + D+ + S+D++
Sbjct: 601 TPFSIGLATTPGSLTSSVLNHGHS--YNNLGMSPGESYDHLTSHHSVDMA 648
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-- 108
S + +I+ISGS D+T+ V++ + + + ++ +G +V C+ V G D
Sbjct: 427 SQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGH-TSTVRCMHLHEKRVVSGSRDATLR 484
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+WD + G+ LH H V C+ G+R++S + D K+++ +T
Sbjct: 485 VWD-IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET 532
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
H ++Y + + +G LD I WD+ G +H T H + + L L+S
Sbjct: 540 HTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDN--ILVS 596
Query: 206 ASLDHHAKIYEMVNFSPVHTLDYPS 230
+ D KI+++ + TL P+
Sbjct: 597 GNADSTVKIWDIKTGQCLQTLQGPN 621
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-- 108
S + +I+ISGS D+T+ V++ + + + ++ +G +V C+ V G D
Sbjct: 432 SQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGH-TSTVRCMHLHEKRVVSGSRDATLR 489
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+WD + G+ LH H V C+ G+R++S + D K+++ +T
Sbjct: 490 VWD-IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET 537
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
H ++Y + + +G LD I WD+ G +H T H + + L L+S
Sbjct: 545 HTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDN--ILVS 601
Query: 206 ASLDHHAKIYEMVNFSPVHTLDYPS 230
+ D KI+++ + TL P+
Sbjct: 602 GNADSTVKIWDIKTGQCLQTLQGPN 626
Score = 36 (17.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 22 STFTNHTTIYKVPLMLYSTP 41
++ TN T+I +P+ S+P
Sbjct: 146 NSVTNSTSIVDLPIHQLSSP 165
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 105 (42.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
+WD S ++ T H + V + ++ P Y D V +GS+DKT ++
Sbjct: 118 IWDTASGEELHTLEGHRNV--VYAIAFNNP--Y----------GDKVATGSFDKTCKLWS 163
Query: 72 TRSPDPVMSVNHGSPVESVLCL---PSGGIFVTGGGLDVC--IWDMLGGGKLLHKFTCHH 126
+ + G E ++CL P + TG +D +WD+ G ++ H
Sbjct: 164 AETGKCFYTFR-GHTAE-IVCLAFNPQSTLVATGS-MDTTAKLWDVESGEEV-STLAGHF 219
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ SLC + G RL++ S DH A ++++
Sbjct: 220 AEIISLCFNTTGDRLVTGSFDHTAILWDV 248
Score = 95 (38.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCL-PSGGIFVTGGGLDVC-IW 110
S I+GSYD+T ++DT S + + ++ H + V ++ P G TG C +W
Sbjct: 103 SGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLW 162
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA--SLDHHAKIYEMTL-KTVSSFTG 165
GK + F H T +CLA + + A S+D AK++++ + VS+ G
Sbjct: 163 SA-ETGKCFYTFRGH--TAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG 217
Score = 62 (26.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 164 TGGLDV-C-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
T LD C +WD GG+ L H+ V +C G+ + +AS D ++++ F
Sbjct: 278 TASLDKSCKVWDA-EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTF 335
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIY 215
H ++ +C + G R+++AS+D ++++
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVDKTSRVW 372
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 120 (47.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 37 LYSTPQ--DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCL 93
L+S Q ++VR SP +++S S DKTV ++D S + V S HG V V
Sbjct: 138 LFSLSQHINWVRCARFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 94 PSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
PSG + +D V +WD+ +LL + H V +L G L++AS D K
Sbjct: 197 PSGTC-IAAASMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLK 254
Query: 152 IYEM 155
I ++
Sbjct: 255 ILDL 258
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPV 223
I D++ G +LL+ H T++ + G+ S D +++ NF V
Sbjct: 255 ILDLMEG-RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS-NFDVV 305
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/172 (26%), Positives = 77/172 (44%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVT-GGGLDVCIWDMLGGG 116
+++ S D TV V+D RSP + H PV V+ P+ G ++ ++ +WD LG
Sbjct: 115 MVTSSEDGTVKVWDVRSPSVQRNYKHQCPVNEVVIHPNQGELISCDQDGNIRVWD-LGEN 173
Query: 117 KLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDML 175
H + SL +AS G L++ + + +++M + D + +
Sbjct: 174 SCTHHLIPEDDVPINSLSVASDGSMLVAGNNKGNCYVWKMQNQR--------DATVLTPV 225
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV-NFSPVHTL 226
KF H K +T + L++ K L + S DH A+I+ NF+ TL
Sbjct: 226 T------KFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQNFNLETTL 271
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 13 WDIPSEAQVSTFT----NHTTIYKVPLM--LYSTPQDYVRAGTVS-PVSSDIVISGSYDK 65
WD SE Q++ T N ++K L R G V+ S D ++S S+D
Sbjct: 229 WDADSE-QLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 66 TVNVYDTRSP-DPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC--IWDMLGGGKLLHKF 122
T ++D + + +M H + S+ C P G + V+ GG D IWD L GK +
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL-VSSGGNDAIGRIWD-LRSGKSIMVL 345
Query: 123 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
H + + ++ + G +L ++S D KI+++
Sbjct: 346 DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
>ASPGD|ASPL0000057386 [details] [associations]
symbol:AN1335 species:162425 "Emericella nidulans"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA]
[GO:0031932 "TORC2 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0001558 EMBL:BN001308 GO:GO:0031929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045860
GO:GO:0030295 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 GO:GO:0031932 GO:GO:0031234 KO:K08266
EMBL:AACD01000018 HOGENOM:HOG000208395 OrthoDB:EOG4GF6PT
RefSeq:XP_658939.1 ProteinModelPortal:Q5BDP5 STRING:Q5BDP5
EnsemblFungi:CADANIAT00001278 GeneID:2877090 KEGG:ani:AN1335.2
OMA:NDYSEPR Uniprot:Q5BDP5
Length = 393
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/172 (26%), Positives = 79/172 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTG--GGLDVCIWDMLGG 115
+++ S D TV V+DTR+ + H +PV V+ P+ G ++G G+ V +WD LG
Sbjct: 90 MVTSSEDGTVKVWDTRTGSLQRNYAHKAPVNDVVIHPNQGELISGDRAGI-VRVWD-LGE 147
Query: 116 GKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDM 174
H+ V S+ +AS G L + + + I+ M + + T + +C
Sbjct: 148 SVCTHQLIPEDDVAVHSVSVASDGSLLCAGNKKGNVYIWRMIQE--AEVTRIVPICT--- 202
Query: 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-VNFSPVHT 225
F H +T + L+ K L + S DH AK++ + ++F P T
Sbjct: 203 ---------FQAHKDYLTRVLLSPDVKHLATCSADHTAKVWNLDLDFPPAKT 245
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ + + V + H PV S+
Sbjct: 418 PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H +TSL + + SAS+D+
Sbjct: 477 SPNGK-YLASAGEDQRLKLWD-LASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSV 534
Query: 151 KIYEMTLKTVSSFTGG 166
+++++ S+ T G
Sbjct: 535 RVWDIRNTHCSAPTDG 550
Score = 101 (40.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S SGS+D+T ++ P+ + H + V+ V P+ TG V
Sbjct: 392 ISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 450
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V SL + GK L SA D K++++ T+
Sbjct: 451 RLWSAQQGNSV-RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 70 (29.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+WD L G L + H +TSL + + SAS+D+ +++++ N
Sbjct: 494 LWD-LASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 541
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 101 (40.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-- 108
S + +I+ISGS D+T+ V++ + + + ++ +G +V C+ V G D
Sbjct: 480 SQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGH-TSTVRCMHLHEKRVVSGSRDATLR 537
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+WD + G+ LH H V C+ G+R++S + D K+++ +T
Sbjct: 538 VWD-IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETET 585
Score = 72 (30.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCI--WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
H ++Y + + +G LD I WD+ G +H T H + + L L+S
Sbjct: 593 HTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDN--ILVS 649
Query: 206 ASLDHHAKIYEMVNFSPVHTLDYP 229
+ D KI+++ + TL P
Sbjct: 650 GNADSTVKIWDIKTGQCLQTLQGP 673
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT 101
D++ T SP ++ SGS D T+ ++D S ++ H S V+SV P+G + +
Sbjct: 42 DWIETVTFSP-DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLAS 100
Query: 102 GGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISA--SLDHHAKIY-EMTL 157
G + +W+ L H H V S+ + G+ A SL H + + + L
Sbjct: 101 GSSDTTIKLWNS-ASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVL 159
Query: 158 KTVSSFTGGL--------DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
S G L + +WD G L H H V L + G+ L S S D
Sbjct: 160 SVAFSPDGQLLASGSAEKTIKLWDSATCG-LKHTLGGHSNWVLPLVFSPDGRLLASGSND 218
Query: 210 HHAKIYEMVNFSPVHTLD 227
K+++ + S HTL+
Sbjct: 219 ATIKLWDPPSGSLKHTLE 236
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 102 (41.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 163 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 220
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H V S+ G S S D ++Y++
Sbjct: 221 AMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 62 (26.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 299 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/171 (23%), Positives = 86/171 (50%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTT-IYKVP----LMLYSTPQDYVRAGTVSPVSSDI 57
H L I VA W S VS + T ++ + L D+V +P S++
Sbjct: 80 HSLEISDVA-WSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP-PSNL 137
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGG 115
++SGS+D++V +++ ++ + +++ H P+ +V +G + V+G +C IWD G
Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG 197
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
L + V+ + + GK +++A+LD+ K+++ + + + ++TG
Sbjct: 198 QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWDI S +V T T H+ ++ + ++T S + +I+GS+D TV V++
Sbjct: 203 LWDIQSGEEVFTLTGHSA--EIISLSFNT-------------SGNRIITGSFDHTVTVWE 247
Query: 72 TRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTV 129
+ V + + H + + S + + +TG C +WD + G K + T H +
Sbjct: 248 ADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG-KCVATLTGHDDEI 306
Query: 130 TSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTG 165
C GK + +AS D A+I+ T + V+ G
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRECVTKLEG 343
Score = 106 (42.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 37/148 (25%), Positives = 63/148 (42%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
LWD S ++ T H + V + ++ P Y D + +GS+DKT ++
Sbjct: 118 LWDTASGEELHTLEGHRNV--VYAIAFNNP--Y----------GDKIATGSFDKTCKLWS 163
Query: 72 TRSPDPVMSVNHGSPVESVLCL---PSGGIFVTGGGLDVC--IWDMLGGGKLLHKFTCHH 126
+ G E ++CL P + TG +D +WD+ G ++ T H
Sbjct: 164 VET-GKCYHTFRGHTAE-IVCLSFNPQSTLVATGS-MDTTAKLWDIQSGEEVF-TLTGHS 219
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYE 154
+ SL + G R+I+ S DH ++E
Sbjct: 220 AEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 183 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
K H ++ + G RL++ S D A+I++
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 84 (34.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
FTGG+D V +WD L G+ H T+T + L+ G L++ +D+ +++M +
Sbjct: 196 FTGGVDNDVKVWD-LRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Query: 221 SP 222
+P
Sbjct: 255 AP 256
Score = 82 (33.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/103 (23%), Positives = 49/103 (47%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPS--GGIFVTGGGLD--VCIWDM 112
++S S DKTV +D + + + H S V S C P+ G + G D +WDM
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS--CCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
G + F ++ +T++ + ++ + +D+ K++++
Sbjct: 169 RQRGAI-QTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDL 209
Score = 70 (29.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 77 PVMSVN-HGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 134
P+M ++ H S V ++ P+G + +G ++ +W + G K H + L
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 135 ASGGKRLISASLDHHAKIYEM 155
S G +++SAS D + +++
Sbjct: 105 TSDGSQIVSASPDKTVRAWDV 125
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 205 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 262
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H + S+ G S S D ++Y++
Sbjct: 263 AMVWDMRSG-QCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +I+
Sbjct: 341 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRIW 394
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ + + V + H PV S+
Sbjct: 436 PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 494
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H +TSL + + SAS+D+
Sbjct: 495 SPNGK-YLASAGEDQRLKLWD-LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSV 552
Query: 151 KIYEM 155
+++++
Sbjct: 553 RVWDI 557
Score = 101 (40.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S SGS+D+T ++ P+ + H + V+ V P+ TG V
Sbjct: 410 ISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 468
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V SL + GK L SA D K++++ T+
Sbjct: 469 RLWSAQQGNSV-RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Score = 69 (29.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+WD L G L + H +TSL + + SAS+D+ +++++ N
Sbjct: 512 LWD-LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 559
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 101 (40.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 162 SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
SF G V +W+++ G ++ FTCH TV S ++S + S S D AKI+ S
Sbjct: 1062 SFDG--TVKVWNVITG-RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS 1118
Query: 222 PVHTL 226
P+H L
Sbjct: 1119 PLHEL 1123
Score = 76 (31.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 36/155 (23%), Positives = 63/155 (40%)
Query: 26 NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85
N TI + ++ D V S I G+ DKT+ V+ + + ++ + +
Sbjct: 599 NKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIK--A 655
Query: 86 PVESVLC--LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141
+ VLC S ++ D V IWD GKL+H + H + V + L
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDS-ATGKLVHTYDEHSEQVNCCHFTNKSNHL 714
Query: 142 ISA--SLDHHAKIYEMTLK----TVSSFTGGLDVC 170
+ A S D K++++ K T+ T ++ C
Sbjct: 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHC 749
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 163 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 220
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H + S+ G S S D ++Y++
Sbjct: 221 AMVWDMRSG-QCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 62 (26.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 299 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 163 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 220
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H + S+ G S S D ++Y++
Sbjct: 221 AMVWDMRSG-QCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 62 (26.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 299 FAGYNDYTINVWDVLKGARVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GG 97
+Y+ A + + +++ S D T ++D S + S HG + VLCL PS G
Sbjct: 154 NYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGN 211
Query: 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
FV+GG +WDM G + + F H + S+ G S S D ++Y++
Sbjct: 212 TFVSGGCDKKAMVWDMRSG-QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 269
Score = 62 (26.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 300 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 353
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 379 PLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 437
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 438 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 495
Query: 151 KIYE 154
++++
Sbjct: 496 RLWD 499
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 102 (41.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 205 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 262
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H V S+ G S S D ++Y++
Sbjct: 263 AMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 62 (26.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 341 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 89 (36.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 35/131 (26%), Positives = 57/131 (43%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPS 95
Y +D V + SP +++ S S DKTV ++ D + H +PV SV
Sbjct: 56 YVGHKDVVTSLQFSP-QGNLLASASRDKTVRLWVLDRKGKSSEFKA-HTAPVRSVDFSAD 113
Query: 96 GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G VT + +W M + L+ H V + G+ ++S S D KI++
Sbjct: 114 GQFLVTASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 155 MTLKT-VSSFT 164
T K V++F+
Sbjct: 173 TTSKQCVNNFS 183
Score = 79 (32.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V IWD + +LL + H V L G L++AS D KI ++V ++TL
Sbjct: 210 VRIWD-IRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLG 114
+V SG D ++D RS VM++ H P+ +V P+G TGGG + +WD+
Sbjct: 321 LVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK 380
Query: 115 GGK-LLHKFTCHHKTVTSLCLAS--GGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDVC 170
+ L++ H VT + + GGK+L+S D+ +Y T + S G D
Sbjct: 381 RDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKI 440
Query: 171 I 171
I
Sbjct: 441 I 441
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 106 (42.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +GS+ VN++ + S++ G + S+ P G ++ G +D +
Sbjct: 115 SPDSQHLA-TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
I+D + GKLLH H + SL + + L++AS D + KIYE+ ++++ G
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSG 230
Score = 53 (23.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ +H F H V + G +++S + D +Y+
Sbjct: 248 VSS-SSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHT-LDYPSPVLSI 235
H V ++ + +S+S D K++++ + VHT LD+ V +
Sbjct: 231 HGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ + + V + H PV S+
Sbjct: 418 PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H +TSL + + SAS+D+
Sbjct: 477 SPNGK-YLASAGEDQRLKLWD-LASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSV 534
Query: 151 KIYEM 155
+++++
Sbjct: 535 RVWDI 539
Score = 101 (40.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S SGS+D+T ++ P+ + H + V+ V P+ TG V
Sbjct: 392 ISPYSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 450
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V SL + GK L SA D K++++ T+
Sbjct: 451 RLWSAQQGNSV-RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 67 (28.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+WD L G L + H +TSL + + SAS+D+ +++++ N
Sbjct: 494 LWD-LASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPL--MLYSTPQDYVRAGTV--SPVSSDIV 58
H L ++ V + S A S+ H ++ + + S V A ++ SP S +
Sbjct: 63 HQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP-DSQFL 121
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+GS+ VN++ + S++ G + S+ P G ++ G +D + I+D +
Sbjct: 122 ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFD-IAT 179
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
GKLLH H + SL + + L++AS D + KIY++
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD G +H F H V + G +++S D IY+
Sbjct: 248 VSS-SSDKSVKVWDA-GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K+++ + VHT D+ V +
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGV 280
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPL--MLYSTPQDYVRAGTV--SPVSSDIV 58
H L ++ V + S A S+ H ++ + + S V A ++ SP S +
Sbjct: 63 HQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP-DSQFL 121
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+GS+ VN++ + S++ G + S+ P G ++ G +D + I+D +
Sbjct: 122 ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFD-IAT 179
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
GKLLH H + SL + + L++AS D + KIY++
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD G +H F H V + G +++S D IY+
Sbjct: 248 VSS-SSDKSVKVWDA-GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K+++ + VHT D+ V +
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGV 280
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 109 (43.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 52 PVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGI-FVTGGGLDVCI 109
P ++ V++G DK V V+D R V ++ H V SV+ P+ + F + +
Sbjct: 232 PTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRV 291
Query: 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 149
W + GG + H VT L L + G L+S+S D +
Sbjct: 292 WSVTGGN-CVQVVRAHESAVTGLSLHATGDYLLSSSEDQY 330
Score = 56 (24.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 139 KRLISASLDHHAKIYEMTLKTVSSF--TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196
K + +LD++ ++ + ++ GG D+ ++ ++L+ F+ H VT +
Sbjct: 426 KNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLN-FSDHSGLVTGVAF 484
Query: 197 ASGGKRLISASLDHHAKIYEM 217
+ L S +D K Y +
Sbjct: 485 GEHAQFLASTGMDRSLKFYSL 505
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 101 (40.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 54 SSDI-VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GGIFVTGG-GLD 106
+SD+ +++ S D T ++D S + S HG + VLCL PS G FV+GG
Sbjct: 205 NSDMQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGNTFVSGGCDKK 262
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+WDM G + + F H + S+ G S S D ++Y++
Sbjct: 263 AMVWDMRSG-QCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 62 (26.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 341 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 101 (40.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PS--GG 97
+Y+ A + + +++ S D T ++D S + S HG + VLCL PS G
Sbjct: 196 NYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSF-HGHGAD-VLCLDLAPSETGN 253
Query: 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
FV+GG +WDM G + + F H + S+ G S S D ++Y++
Sbjct: 254 TFVSGGCDKKAMVWDMRSG-QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 311
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D + +WD+L G ++ F H V++L ++ G S S DH +++
Sbjct: 342 FAGYNDYTINVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVW 395
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 49 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 93
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 94 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 151
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 152 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 191
Score = 108 (43.1 bits), Expect = 0.00045, P = 0.00045
Identities = 47/174 (27%), Positives = 75/174 (43%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWD 111
S ++ +G D VN++ P+ +MS+ H SPVESV + V G + +WD
Sbjct: 36 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 95
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-TVSSFTGGLDV- 169
L K+L H + SL G+ + S S D + K++++ K V + G
Sbjct: 96 -LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 154
Query: 170 -CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
C+ GK L H TV L +G +++S H + +V F P
Sbjct: 155 RCL-RFSPDGKWLASAADDH-TVKLWDLTAG--KMMSEFPGHTGPV-NVVEFHP 203
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 108 (43.1 bits), Expect = 0.00046, P = 0.00046
Identities = 47/174 (27%), Positives = 75/174 (43%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWD 111
S ++ +G D VN++ P+ +MS+ H SPVESV + V G + +WD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK-TVSSFTGGLDV- 169
L K+L H + SL G+ + S S D + K++++ K V + G
Sbjct: 92 -LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 170 -CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
C+ GK L H TV L +G +++S H + +V F P
Sbjct: 151 RCL-RFSPDGKWLASAADDH-TVKLWDLTAG--KMMSEFPGHTGPV-NVVEFHP 199
>MGI|MGI:1918604 [details] [associations]
symbol:Wdr31 "WD repeat domain 31" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1918604 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL732594 EMBL:AF274321
EMBL:AK017259 EMBL:AK141026 EMBL:BC037102 IPI:IPI00119217
IPI:IPI00417055 RefSeq:NP_076086.1 UniGene:Mm.155573
ProteinModelPortal:Q9JHB4 SMR:Q9JHB4 STRING:Q9JHB4 PRIDE:Q9JHB4
Ensembl:ENSMUST00000030087 Ensembl:ENSMUST00000107452
Ensembl:ENSMUST00000120095 GeneID:71354 KEGG:mmu:71354
UCSC:uc008tet.1 UCSC:uc008teu.1 CTD:114987
GeneTree:ENSGT00700000104574 HOGENOM:HOG000290168
HOVERGEN:HBG072917 InParanoid:Q9JHB4 OMA:EERIQTK OrthoDB:EOG49GKGV
NextBio:333609 Bgee:Q9JHB4 CleanEx:MM_WDR31 Genevestigator:Q9JHB4
GermOnline:ENSMUSG00000028391 Uniprot:Q9JHB4
Length = 367
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/157 (24%), Positives = 68/157 (43%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVP------LMLYSTPQDY--VRAGTVSPVS---SDIVIS 60
LW + + Q S + T +Y P + PQ+Y V TVS ++ SD+ IS
Sbjct: 20 LWAVMGKLQ-SKLRHSTYLYSRPDGIIEERVQTKAPQEYIPVHVDTVSVIATLNSDLCIS 78
Query: 61 GSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118
G DKT Y+ ++ V H + + C+P F + V +WD+ G
Sbjct: 79 GGKDKTAVAYNWKTGRMVKRFTGHEREITKIACIPKANQFFSASRDKTVLMWDLQGSSHP 138
Query: 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + H VT L ++ +L + S D+ ++++
Sbjct: 139 RQQLSGHAMVVTGLAVSPDSSQLCTGSRDNSLLLWDV 175
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ + + V + H PV S+
Sbjct: 418 PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSF 476
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H ++TSL + + SAS+D+
Sbjct: 477 SPNGK-YLASAGEDQRLKLWD-LASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSV 534
Query: 151 KIYEM 155
+++++
Sbjct: 535 RVWDI 539
Score = 100 (40.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S SGS+D+T ++ P+ + H + V+ V P+ TG V
Sbjct: 392 ISPFSLYFA-SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 450
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V SL + GK L SA D K++++ T+
Sbjct: 451 RLWSAQQGNSV-RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 67 (28.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+WD L G L + H ++TSL + + SAS+D+ +++++
Sbjct: 494 LWD-LASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 617 PLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 675
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 676 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 733
Query: 151 KIYE 154
++++
Sbjct: 734 RLWD 737
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 619 PLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 678 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Query: 151 KIYE 154
++++
Sbjct: 736 RLWD 739
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 619 PLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 678 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Query: 151 KIYE 154
++++
Sbjct: 736 RLWD 739
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 620 PLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 679 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 736
Query: 151 KIYE 154
++++
Sbjct: 737 RLWD 740
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 620 PLRIFAGHLADVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H TV SL + G+ L S S+D+
Sbjct: 679 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 736
Query: 151 KIYE 154
++++
Sbjct: 737 RLWD 740
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 102 (41.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 56 (24.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ G +H F H V + G +++S D IY+
Sbjct: 248 VSS-SSDKSVKVWDV-GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 43 (20.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K++++ + VHT D+ V +
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 102 (41.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 56 (24.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ G +H F H V + G +++S D IY+
Sbjct: 248 VSS-SSDKSVKVWDV-GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 43 (20.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K++++ + VHT D+ V +
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 102 (41.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SP-DSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 56 (24.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ G +H F H V + G +++S D +Y+
Sbjct: 248 VSS-SSDKSVKVWDV-GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 124 (48.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 71 DTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
DT P ++ H V ++ +P G + G+D V IWD G + + + H
Sbjct: 289 DTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHS 348
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGG-LDVCI 171
+ V +C ++ G+R +S D ++++ T K +SSFT G + CI
Sbjct: 349 QAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCI 395
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 103 (41.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 49 TVSPVSSD--IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL 105
TV +SD +SGS DK++ +Y+ + S HG + ++ +
Sbjct: 18 TVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSDNKQLFSCAEK 77
Query: 106 DVCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVS 161
+ WD + G+++ +F H+ T+TS+C+ L S S D K +++ K+++
Sbjct: 78 QLYQWD-IASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVKAWDLRTKSIN 133
Score = 55 (24.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 148 HHAKIYEMTLKTVSSFTGGL--------DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG 199
H K+Y+ + + S+F L D I+++L G KLL K + H +T +
Sbjct: 249 HKNKVYK--INSCSNFDDSLIISGSEDNDFYIYELLSG-KLLSKLSGHSNIITHVDSHPS 305
Query: 200 GKRLISASLDHHAKIYE 216
+ I++S D +I++
Sbjct: 306 KNQFITSSTDCTIRIWD 322
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 102 (41.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 55 (24.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ G +H F H V + G +++S D +Y+
Sbjct: 248 VSS-SSDKSVKVWDV-GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 43 (20.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K++++ + VHT D+ V +
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 115 (45.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 42/147 (28%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 160 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 205
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R V + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 206 WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 264
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +I+++
Sbjct: 265 VTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 91 (37.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +I+++ F+
Sbjct: 237 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFA 295
Query: 222 P 222
P
Sbjct: 296 P 296
Score = 69 (29.3 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 150 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 207
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 208 IRKKAAV-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 249
Score = 43 (20.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 161 SSFTGG-LD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
S GG D V +WD ++L+K H +V L ++SAS D
Sbjct: 325 SKIAGGSADRFVYVWDTTSR-RILYKLPGHAGSVNELAFHPEEPIILSASSD 375
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 101 (40.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SPDSQHLA-TGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 56 (24.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ G +H F H V + G +++S D +Y+
Sbjct: 248 VSS-SSDKSVKVWDV-GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 105 (42.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +GS+ VN++ + S++ G + S+ P G ++ G +D +
Sbjct: 115 SPDSQHLA-TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
I+D + GKLLH H + SL ++ + L++AS D + KIY++ ++++ G
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG 230
Score = 51 (23.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + V +WD+ +H F H V + G +++S D +Y+
Sbjct: 248 VSS-SSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+++++GS ++ V+D + + ++ H + + S+ P G FV G LD + +WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLWDV 134
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
G + K+ H + V L + GK L SA+ DH K++++T K + FTG
Sbjct: 135 RRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Score = 107 (42.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWDMLG 114
++ +G D VNV+ P+ VMS+ H +P+ES+ + V G + +WD L
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
K+L H + SL G + S SLD K++++ K
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
Score = 58 (25.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
K ++S V +WD L GK++ +FT H V + L S S D + +++
Sbjct: 160 KWLASAADDHTVKLWD-LTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Query: 218 VNFSPVHTLDYPS-PVLSI 235
F V ++ + PV I
Sbjct: 219 EKFHVVSCIEEEATPVRCI 237
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 109 (43.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPL--MLYSTPQDYVRAGTV--SPVSSDIV 58
H L ++ V + + A S+ H ++ + + S V A TV SP S +
Sbjct: 63 HQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSP-DSKYI 121
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+GS+ VN++ S S++ G + S+ P G ++ G +D + I+D +
Sbjct: 122 ATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFD-IAT 179
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
GKLLH H + SL + + L++AS D + KIY++
Sbjct: 180 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 46 (21.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
VSS + + +WD ++ F H V S+ G +++SA D IY+
Sbjct: 248 VSS-SSDKSIKVWDT-SSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 38/139 (27%), Positives = 71/139 (51%)
Query: 25 TNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNH 83
T+H IY PL +++ + V P +S+ V +GS DKT ++D + + V + + H
Sbjct: 588 TDH--IY--PLRIFAGHINDVDCVEFHP-NSNYVFTGSSDKTCRMWDVHTGNCVRVFLGH 642
Query: 84 GSPVESVLCLPSGGIFVTGG--GLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASGGKR 140
+ V + P G +GG G+ +C+WD +G G+ L H + ++ SL + G
Sbjct: 643 TNSVNCLAVSPDGRWLASGGEDGI-ICVWD-IGSGRRLKSMRGHARASLYSLAFSRDGTV 700
Query: 141 LISASLDHHAKIYEMTLKT 159
L+S D+ +++++ T
Sbjct: 701 LVSGCADNSVRVWDVKKNT 719
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 133 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 178
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 237
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 90 (36.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 210 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 268
Query: 222 P 222
P
Sbjct: 269 P 269
Score = 70 (29.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 180
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 181 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 222
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 179
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 238
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 90 (36.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 211 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 222 P 222
P
Sbjct: 270 P 270
Score = 70 (29.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 181
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 182 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 179
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 238
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 90 (36.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 211 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 222 P 222
P
Sbjct: 270 P 270
Score = 70 (29.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 181
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 182 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 179
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 238
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 90 (36.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 211 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 222 P 222
P
Sbjct: 270 P 270
Score = 70 (29.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 181
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 182 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 179
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 238
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 90 (36.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 211 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 222 P 222
P
Sbjct: 270 P 270
Score = 70 (29.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 181
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 182 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 99 (39.9 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 44 YVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV-----NHGSPVESVLCLPSGGI 98
+V SP +++ V G D ++Y+ RS + + V +H + L I
Sbjct: 106 WVMTCAYSP-TANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQI 164
Query: 99 FVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL- 157
+ G + +WD+ G K+ +F+ H+ V S+ ++ IS + D AK++++
Sbjct: 165 VTSSGDMTCILWDVENGTKIT-EFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSG 223
Query: 158 KTVSSFTG 165
K V +FTG
Sbjct: 224 KCVQTFTG 231
Score = 59 (25.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 163 FTGGLD-VC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
F G D C +WD L G ++L T H V+ L + + G L + S D KI+
Sbjct: 293 FAGYDDFTCNVWDTLKGERVL-SLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 88 (36.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 41/161 (25%), Positives = 66/161 (40%)
Query: 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
L A WD + + F H Y+ Y +D V + SP +++ S S D+TV
Sbjct: 33 LATASWD--TFLMLWNFKPHARAYR-----YVGHKDVVTSVQFSP-HGNLLASASRDRTV 84
Query: 68 NVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC 124
++ D R H +PV SV G T + +W M + L+
Sbjct: 85 RLWIPDKRGKFSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ-RFLYSLYR 142
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT-VSSFT 164
H V + G+ ++S S D KI++ T K V++F+
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Score = 75 (31.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V +WD+ KLL + H V + G LI+AS D KI +++ ++TL
Sbjct: 210 VKVWDVRVN-KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 114 (45.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG 97
Y ++ + + +S +I+ SGS D T+ ++D R + PV +V +G
Sbjct: 141 YVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHAADYIESDFPVTAVAISEAGN 200
Query: 98 IFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+GG D+ +WD+ +++ H T+T+L ++ + L+S ++D A+ +++
Sbjct: 201 EIYSGGIDNDIKVWDVRKKA-VVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDI 258
Score = 41 (19.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEM 217
V IW GKL +K H V + + G + LI S S D + E+
Sbjct: 303 VVIWSN-ETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGEL 351
>ZFIN|ZDB-GENE-021231-3 [details] [associations]
symbol:wdr43 "WD repeat domain 43" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-021231-3 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0001525 GO:GO:0060218 GO:GO:0001570
InterPro:IPR007148 Pfam:PF04003 KO:K14546 CTD:23160
HOVERGEN:HBG060012 EMBL:BC095298 EMBL:AF506230 IPI:IPI00960511
RefSeq:NP_001018176.1 UniGene:Dr.33061 STRING:Q8JHG6 GeneID:317637
KEGG:dre:317637 InParanoid:Q8JHG6 NextBio:20807121 Uniprot:Q8JHG6
Length = 650
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIFVTGGG-LDV 107
S SD++ G+ T+ +Y T D +++ H PV SV P + +G +
Sbjct: 82 SAEQSDLLALGTAAGTILIYSTLKGDLHCTLDGGHSGPVNSVQWHPEDSVLYSGSDDTHI 141
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV-SSFTG 165
WD L GK+ K+ ++SLC++ GK L+SA + K++++ K V FTG
Sbjct: 142 AEWD-LKTGKVCCKWKADRSAISSLCISPDGKMLLSAGMT--IKMWDLETKEVYRKFTG 197
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 134 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 179
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R V + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 180 WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 238
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 90 (36.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 211 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 269
Query: 222 P 222
P
Sbjct: 270 P 270
Score = 69 (29.3 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 181
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 182 IRKKAAV-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+++++GS ++ V+D + + ++ H + + S+ P G FV G LD + +WD+
Sbjct: 75 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLWDV 133
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
G + K+ H + V L + GK L SA+ DH K++++T K + FTG
Sbjct: 134 RRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 186
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+++++GS ++ V+D + + ++ H + + S+ P G FV G LD + +WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLWDV 134
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
G + K+ H + V L + GK L SA+ DH K++++T K + FTG
Sbjct: 135 RRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Score = 107 (42.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWDMLG 114
++ +G D VNV+ P+ VMS+ H +P+ES+ + V G + +WD L
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
K+L H + SL G + S SLD K++++ K
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
Score = 49 (22.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
K ++S V +WD L GK++ +FT H+ V + L + + + +++
Sbjct: 160 KWLASAADDHTVKLWD-LTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDL 218
Query: 218 VNFSPVHTLDYPS-PVLSI 235
F V ++ + PV I
Sbjct: 219 EKFHVVSCIEEEATPVRCI 237
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/114 (28%), Positives = 61/114 (53%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDM 112
+++++GS ++ V+D + + ++ H + + S+ P G FV G LD + +WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDIKLWDV 134
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
G + K+ H + V L + GK L SA+ DH K++++T K + FTG
Sbjct: 135 RRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Score = 107 (42.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGL-DVCIWDMLG 114
++ +G D VNV+ P+ VMS+ H +P+ES+ + V G + +WD L
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
K+L H + SL G + S SLD K++++ K
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
Score = 48 (22.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYE 216
K ++S V +WD L GK++ +FT H+ V + + L+ S S + ++
Sbjct: 160 KWLASAADDHTVKLWD-LTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWD 218
Query: 217 MVNFSPVHTLDYPS-PVLSI 235
+ F V ++ + PV I
Sbjct: 219 LEKFHVVSCIEEEATPVRCI 238
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 121 (47.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 29/128 (22%), Positives = 60/128 (46%)
Query: 49 TVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG-GLD 106
+++ +S +V G D ++ ++DT ++ N H V ++ G + +G D
Sbjct: 70 SIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDND 129
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
+ +WD++G L + H VT L GGK+L+S+S D +++++ + G
Sbjct: 130 IILWDVVGESGLF-RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 167 LDVCIWDM 174
+W +
Sbjct: 189 HHSEVWSV 196
Score = 44 (20.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYE 216
F+ G D V WD K H T HH + L +++ G L++ S D + ++
Sbjct: 640 FSIGKDRLVKYWD---ADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>UNIPROTKB|F5H0C3 [details] [associations]
symbol:KIF21A "Kinesin-like protein KIF21A" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 EMBL:AC084373 EMBL:AC090668 EMBL:AC121334
RefSeq:NP_001166936.1 UniGene:Hs.374201 GeneID:55605 KEGG:hsa:55605
CTD:55605 HGNC:HGNC:19349 KO:K10395 ChiTaRS:KIF21A GenomeRNAi:55605
NextBio:60157 IPI:IPI01013038 ProteinModelPortal:F5H0C3
PRIDE:F5H0C3 Ensembl:ENST00000541463 UCSC:uc001rlz.3
ArrayExpress:F5H0C3 Bgee:F5H0C3 Uniprot:F5H0C3
Length = 1621
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 52/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1270 INPFPASKGIRAFPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1329
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1330 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1388
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1389 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1445
Query: 195 C---LASGGKRLISASLDHHAKIYEMVN-----FSPVHTLDYP 229
++SG +I+ S DH+ K++++ SP H + P
Sbjct: 1446 TVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1488
>UNIPROTKB|F5H219 [details] [associations]
symbol:KIF21A "Kinesin-like protein KIF21A" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 EMBL:AC084373 EMBL:AC090668 EMBL:AC121334
RefSeq:NP_001166934.1 UniGene:Hs.374201 GeneID:55605 KEGG:hsa:55605
CTD:55605 HGNC:HGNC:19349 KO:K10395 ChiTaRS:KIF21A GenomeRNAi:55605
NextBio:60157 IPI:IPI00956238 PRIDE:F5H219 Ensembl:ENST00000544797
UCSC:uc010skl.2 ArrayExpress:F5H219 Bgee:F5H219 Uniprot:F5H219
Length = 1637
Score = 126 (49.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 52/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1286 INPFPASKGIRAFPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1345
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1346 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1404
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1405 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1461
Query: 195 C---LASGGKRLISASLDHHAKIYEMVN-----FSPVHTLDYP 229
++SG +I+ S DH+ K++++ SP H + P
Sbjct: 1462 TVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1504
>UNIPROTKB|Q7Z4S6 [details] [associations]
symbol:KIF21A "Kinesin-like protein KIF21A" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001752 InterPro:IPR015943
InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00129 SMART:SM00320 GO:GO:0005524 GO:GO:0005737
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471111 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 EMBL:AY368076 EMBL:AF450487 EMBL:AB290166
EMBL:AC084373 EMBL:AC090668 EMBL:AC121334 EMBL:AF155117
EMBL:AK000059 EMBL:BC041430 EMBL:BC047572 EMBL:AB051495
EMBL:BX537855 IPI:IPI00425404 IPI:IPI00425405 IPI:IPI00425407
IPI:IPI00425409 RefSeq:NP_001166934.1 RefSeq:NP_001166935.1
RefSeq:NP_001166936.1 RefSeq:NP_060111.2 UniGene:Hs.374201
ProteinModelPortal:Q7Z4S6 SMR:Q7Z4S6 DIP:DIP-56253N IntAct:Q7Z4S6
STRING:Q7Z4S6 PhosphoSite:Q7Z4S6 DMDM:50400977 PaxDb:Q7Z4S6
PeptideAtlas:Q7Z4S6 PRIDE:Q7Z4S6 Ensembl:ENST00000361418
Ensembl:ENST00000361961 GeneID:55605 KEGG:hsa:55605 UCSC:uc001rlw.3
UCSC:uc001rlx.3 UCSC:uc001rly.3 CTD:55605 GeneCards:GC12M039687
HGNC:HGNC:19349 HPA:CAB022079 MIM:135700 MIM:608283
neXtProt:NX_Q7Z4S6 Orphanet:45358 PharmGKB:PA134882934
HOVERGEN:HBG052247 KO:K10395 ChiTaRS:KIF21A GenomeRNAi:55605
NextBio:60157 ArrayExpress:Q7Z4S6 Bgee:Q7Z4S6 CleanEx:HS_KIF21A
Genevestigator:Q7Z4S6 GermOnline:ENSG00000139116 Uniprot:Q7Z4S6
Length = 1674
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 52/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1323 INPFPASKGIRAFPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1382
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1383 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1441
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1442 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1498
Query: 195 C---LASGGKRLISASLDHHAKIYEMVN-----FSPVHTLDYP 229
++SG +I+ S DH+ K++++ SP H + P
Sbjct: 1499 TVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1541
>UNIPROTKB|F8WCP6 [details] [associations]
symbol:KIF21A "Kinesin-like protein KIF21A" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 EMBL:AC084373 EMBL:AC090668 EMBL:AC121334
HGNC:HGNC:19349 ChiTaRS:KIF21A OMA:HKIRDTQ IPI:IPI01013445
PRIDE:F8WCP6 Ensembl:ENST00000395670 ArrayExpress:F8WCP6
Bgee:F8WCP6 Uniprot:F8WCP6
Length = 1675
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 52/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1324 INPFPASKGIRAFPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1383
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1384 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1442
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1443 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1499
Query: 195 C---LASGGKRLISASLDHHAKIYEMVN-----FSPVHTLDYP 229
++SG +I+ S DH+ K++++ SP H + P
Sbjct: 1500 TVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1542
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ T+ + V + H PV S+
Sbjct: 414 PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAF 472
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H +TSL + + SAS+D+
Sbjct: 473 SPNGK-YLASAGEDQRLKLWD-LASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSV 530
Query: 151 KIYEM 155
+++++
Sbjct: 531 RVWDI 535
Score = 93 (37.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 31/113 (27%), Positives = 49/113 (43%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S S S+D+T ++ P+ + H + V+ V P+ TG V
Sbjct: 388 ISPHSLYFA-SASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTV 446
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V SL + GK L SA D K++++ T+
Sbjct: 447 RLWSTQQGNSV-RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 498
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+WD L G L + H +TSL + + SAS+D+ +++++
Sbjct: 490 LWD-LASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 32 KVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVL 91
K+ ++L QD + + P S D ++SGS D+TV ++D R+ ++++ V +V
Sbjct: 476 KIVMILQGHEQD-IYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 533
Query: 92 CLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKF-------TCHHKTVTSLCLASGGKRLI 142
P G ++ G LD V +WD G L+ + T H +V S+ G+ ++
Sbjct: 534 VSPGDGKYIAAGSLDRAVRVWDS-ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 592
Query: 143 SASLDHHAKIYEM-TLKTVS-SFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGG 200
S SLD K++ + S S T C +G H V S+
Sbjct: 593 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG----------HKDFVLSVATTQND 642
Query: 201 KRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238
+ ++S S D ++ + +P+ L + + V+S+ V+
Sbjct: 643 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 681
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 88 (36.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPS 95
Y +D V + SP +++ S S D+TV ++ D + H +PV SV
Sbjct: 56 YVGHKDVVTSLQFSP-QGNLLASASRDRTVRLWVLDRKGKSSEFKA-HTAPVRSVDFSAD 113
Query: 96 GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G + VT + +W M + L+ H V + G+ ++S S D KI++
Sbjct: 114 GQLLVTASEDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 155 MTLKT-VSSFT 164
T K V++F+
Sbjct: 173 TTNKQCVNNFS 183
Score = 74 (31.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V IWD + KLL + H V L G L++AS D K+ +++ ++TL
Sbjct: 210 VKIWD-IRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+WD + +V HT+ Y P R G P +V +GS D TV +
Sbjct: 133 VAVWDSETGERVKRLKGHTSFVN---SCY--P---ARRG---P---QLVCTGSDDGTVKL 178
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKT 128
+D R + + + V +V + ++GG D+ +WD L KL + H +
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD-LRQNKLTYTMRGHADS 237
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
VT L L+S G L+S ++D+ +++++
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+GG+D + +WD L KL + H +VT L L+S G L+S ++D+ +++++ F+
Sbjct: 210 SGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFA 268
Query: 222 P 222
P
Sbjct: 269 P 269
Score = 70 (29.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPS--GGIFVTGGGLD--VCIWD 111
++ S S DKTV V+D+ + + V + H S V S C P+ G V G D V +WD
Sbjct: 123 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS--CYPARRGPQLVCTGSDDGTVKLWD 180
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ + F ++ V ++ ++IS +D+ K++++
Sbjct: 181 IRKKAAI-QTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 222
>DICTYBASE|DDB_G0283265 [details] [associations]
symbol:mkkA "octicosapeptide/Phox/Bem1p
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0005938
"cell cortex" evidence=IDA] [GO:0004709 "MAP kinase kinase kinase
activity" evidence=IEA;ISS] [GO:0000186 "activation of MAPKK
activity" evidence=IEA;ISS] [GO:0000165 "MAPK cascade"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] GenBank:AAFI02000052
Ncbi:EAL65773
Length = 1267
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/115 (33%), Positives = 52/115 (45%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ LWD + + +ST HT +Y D V T + +V+S S DKT NV
Sbjct: 1088 IQLWDAETGSCLSTLRGHTG------GIYCVKTDQV--ATHGNGYNHLVVSASVDKTSNV 1139
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKF 122
+DTRS V S + E VLC V G D + +WD +G GK + F
Sbjct: 1140 WDTRSSSKVRSFTQHT--EDVLCCYVFDQKVVTGSCDGTIKLWD-IGTGKTISTF 1191
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
K +SS G+ + IWD+ + HH+T+ SL ++LI+ SLD KI+ +
Sbjct: 1211 KIISSGKTGI-IRIWDIYNE-RDSRSIGGHHETIFSLQF--NNQKLITGSLDKLVKIWSI 1266
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN---HG--SPVESVLCLPSGGIFVTGGGLDVCIWD 111
++ SGS DKTV +D R P V V HG S V SV PSG + TG C+
Sbjct: 768 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 827
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ GG+++ + H V S+ + G L++ S D K+ ++
Sbjct: 828 DIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 871
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVN---HG--SPVESVLCLPSGGIFVTGGGLDVCIWD 111
++ SGS DKTV +D R P V V HG S V SV PSG + TG C+
Sbjct: 769 MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 828
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ GG+++ + H V S+ + G L++ S D K+ ++
Sbjct: 829 DIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDL 872
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 46/194 (23%), Positives = 89/194 (45%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDML 113
D ++SGS D++V ++D R+ ++++ V +V P G + + G LD V +WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKL-IAAGSLDRTVRVWDST 368
Query: 114 GGGKLLHKFTC-------HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
G L+ + H +V S+ ++ G+++ S SLD K++ + K+ T
Sbjct: 369 TGF-LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKST-- 425
Query: 167 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C +G H V S+C + ++S S D ++ + +P+ L
Sbjct: 426 ---CEVTYIG----------HKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
Query: 227 D-YPSPVLSIDVSM 239
+ + V+S+ VS+
Sbjct: 473 QGHRNSVISVAVSL 486
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 46/194 (23%), Positives = 89/194 (45%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDML 113
D ++SGS D++V ++D R+ ++++ V +V P G + + G LD V +WD
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKL-IAAGSLDRTVRVWDST 368
Query: 114 GGGKLLHKFTC-------HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGG 166
G L+ + H +V S+ ++ G+++ S SLD K++ + K+ T
Sbjct: 369 TGF-LVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKST-- 425
Query: 167 LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
C +G H V S+C + ++S S D ++ + +P+ L
Sbjct: 426 ---CEVTYIG----------HKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLML 472
Query: 227 D-YPSPVLSIDVSM 239
+ + V+S+ VS+
Sbjct: 473 QGHRNSVISVAVSL 486
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/147 (24%), Positives = 62/147 (42%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDI-VISGSYDKTVNVY 70
LW +P + T H T V + + PQ T++ SD+ + S + D +V ++
Sbjct: 242 LWKVPDCTLIRTLRGHNT--NVGAISFH-PQ-----ATLTLEESDVNMASCAADGSVKLW 293
Query: 71 DTRSPDPVMSVN-HGSPVESVLCLPSGGIF-VTGGGLDVCIWDMLGGGKLLHKFTCHHKT 128
S +P+ + H V V PSG T +WD+ ++LH+ H K
Sbjct: 294 SLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQ-EGHSKG 352
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEM 155
V L G + LD A+++++
Sbjct: 353 VHDLHFHPDGSLAGTGGLDSFARVWDL 379
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 146 LDHHAK-IYEMTLKTVSSF---TG-GLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLA-S 198
L+ H K IY + + F TG G + C +WD L + ++ H V+S+ +
Sbjct: 388 LEGHIKEIYSINFSP-NGFHVATGSGDNACKVWD-LRQRRCIYTIPAHQNLVSSVKFQPN 445
Query: 199 GGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSIDVS 238
G L++ + D+ AKI+ +SP+ TL + V+ +D+S
Sbjct: 446 DGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLS 486
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPS 95
Y +D + + SP+ + ++ S S D+T+ ++ D R H +PV SV +
Sbjct: 56 YVGHKDVITSVQFSPLGN-LLASASRDRTIRLWIPDKRGKSSEFKA-HTAPVRSV-DFSA 112
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G F+ D + +W+M + L+ H V + G+ ++S S D KI+
Sbjct: 113 DGQFLASASEDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 154 EMTLKT-VSSFT 164
+ T K V++F+
Sbjct: 172 DTTNKQCVNNFS 183
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V IWD + KLL + H V + G LI+AS D KI +++ ++TL
Sbjct: 210 VKIWD-IRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 37 LYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSG 96
L T Q + ++ I+++GS D T+ V+D S + ++ HG +V C+
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATL-HGHHA-AVRCVQFD 387
Query: 97 GIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G V GG D V IW+ G+ + T H+ V SL S + S SLD ++++
Sbjct: 388 GTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Query: 155 MT 156
T
Sbjct: 447 FT 448
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 49 TVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLD- 106
T + D++++GS D T+ V+ + + + V H V + + G ++ G D
Sbjct: 260 TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ-ISQCGRYIVSGSTDR 318
Query: 107 -VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
V +W + G LLH H TV C+A G L++ S D +++++
Sbjct: 319 TVKVWSTVDGS-LLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDV 365
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 140 RLISASLDHHAKIYEMTLKTVSSF--TGGLDVCI--WDMLGG-GKLLHKFTCHHKTVTSL 194
R I H+ ++Y + ++ S +G LD I WD G+ H ++TS
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS- 467
Query: 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSI 235
+ G L+S + D H +++++ + VH L + S + S+
Sbjct: 468 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 148 HHAKIYEMTLKTVSSFTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
HHA + + + +GG D V IW+ G+ + T H+ V SL S + S
Sbjct: 377 HHAAVRCVQFDGTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERSIVCS 435
Query: 206 ASLDHHAKIYE 216
SLD ++++
Sbjct: 436 GSLDTSIRVWD 446
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 37 LYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSG 96
L T Q + ++ I+++GS D T+ V+D S + ++ HG +V C+
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATL-HGHHA-AVRCVQFD 387
Query: 97 GIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G V GG D V IW+ G+ + T H+ V SL S + S SLD ++++
Sbjct: 388 GTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Query: 155 MT 156
T
Sbjct: 447 FT 448
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 49 TVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLD- 106
T + D++++GS D T+ V+ + + + V H V + + G ++ G D
Sbjct: 260 TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQ-ISQCGRYIVSGSTDR 318
Query: 107 -VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
V +W + G LLH H TV C+A G L++ S D +++++
Sbjct: 319 TVKVWSTVDGS-LLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDV 365
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 140 RLISASLDHHAKIYEMTLKTVSSF--TGGLDVCI--WDMLGG-GKLLHKFTCHHKTVTSL 194
R I H+ ++Y + ++ S +G LD I WD G+ H ++TS
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS- 467
Query: 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSI 235
+ G L+S + D H +++++ + VH L + S + S+
Sbjct: 468 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 148 HHAKIYEMTLKTVSSFTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
HHA + + + +GG D V IW+ G+ + T H+ V SL S + S
Sbjct: 377 HHAAVRCVQFDGTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERSIVCS 435
Query: 206 ASLDHHAKIYE 216
SLD ++++
Sbjct: 436 GSLDTSIRVWD 446
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 121 (47.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 37 LYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD-TRSPDPVMSVNHGSPVESVLCLPS 95
+Y ++ +R + SP S V SGS D T+ ++D R + + HG+ V+ V P
Sbjct: 224 MYQAHKEAIRGISFSPTDSKFV-SGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQ 282
Query: 96 GGIFVTGGGLD---VCIWDMLGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
G+ V+G + + IWD G L LH H TV L G L++AS DH
Sbjct: 283 KGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNWLVTASRDHLL 339
Query: 151 KIYEM 155
K++++
Sbjct: 340 KLFDI 344
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKF-TCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
+GG D + W++ G K + T H V +L G L S S DH K +
Sbjct: 376 SGGSDGSILFWNV-GTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 47/193 (24%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H VE +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 87 (35.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSVNHGSPVESVLCLPS 95
Y +D V + SP+ + ++ S S D+TV ++ D R H +PV SV
Sbjct: 56 YVGHKDVVTSVQFSPLGN-LLASASRDRTVRLWIPDKRGKSSEFKA-HTAPVRSVDFSAD 113
Query: 96 GGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
G T + +W+M + L+ H V + G+ ++S S D KI++
Sbjct: 114 GQFLATASEDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 155 MTLKT-VSSFT 164
T K V++F+
Sbjct: 173 TTNKQCVNNFS 183
Score = 74 (31.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V IWD + KLL + H V + G +I+AS D KI +++ ++TL
Sbjct: 210 VKIWD-IRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 33/125 (26%), Positives = 66/125 (52%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ V +GS D+TV ++D + + V + H P+ S+
Sbjct: 575 PLRIFAGHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 633
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G F+ G D V +WD +G G ++ + H T+ +L + G+ + S S+D+
Sbjct: 634 SPNGK-FLASGSTDGRVLLWD-IGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTV 691
Query: 151 KIYEM 155
+++++
Sbjct: 692 RLWDV 696
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD-VC 108
SP++S+I+ S S D T+ +++ + + H + ++ G I ++G + +
Sbjct: 77 SPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETIT 136
Query: 109 IWDMLG-GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT----LKTVSSF 163
IWD+ GGK+L H V+S+ L ++SAS D +++++ LKT+++
Sbjct: 137 IWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNS 196
Query: 164 TGG 166
T G
Sbjct: 197 TFG 199
>UNIPROTKB|G3MXD5 [details] [associations]
symbol:Bt.97070 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00680000099754 OMA:SMEDASE
EMBL:DAAA02043983 EMBL:DAAA02043984 EMBL:DAAA02043985
EMBL:DAAA02043986 EMBL:DAAA02043987 EMBL:DAAA02043988
EMBL:DAAA02043989 EMBL:DAAA02043990 EMBL:DAAA02043991
EMBL:DAAA02043992 EMBL:DAAA02043993 EMBL:DAAA02043994
EMBL:DAAA02043995 Ensembl:ENSBTAT00000063330 Uniprot:G3MXD5
Length = 1596
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 44/209 (21%), Positives = 91/209 (43%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-L 91
PL S + + + + +++ +GS D++ +++ + + ++ H + V S+
Sbjct: 1256 PLQCVSMAEGHTKPVLCVDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKY 1315
Query: 92 CLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
C SG +F + +WD+ K + T + V+ A+ R +++ H +
Sbjct: 1316 CRHSGLVFSVSASY-IKVWDIRDSAKCVRTLTSSGQVVSGDACAAASTRTVTSGQGEH-Q 1373
Query: 152 IYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA-SGGKR--LIS 205
I ++ L S G V +W+ L + + K T H V L A + G+R +++
Sbjct: 1374 INQIALSPAGSMLYAASGNAVRVWE-LSRFQPIAKLTGHIGPVMCLTAAQTAGQRDLVVT 1432
Query: 206 ASLDHHAKIYEMVN-----FSPVHTLDYP 229
S DH+ K++E+ P H + P
Sbjct: 1433 GSKDHYVKMFELGEGVTGTIGPTHNFEPP 1461
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 110 (43.8 bits), Expect = 0.00091, P = 0.00091
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 4 DLPILIVALWDIPSEAQVSTFTNHTTIYKV--PLMLYSTP--QDYVRAGTVSPVSSDIVI 59
+LPI VA + +E N ++ + ++YS D + + VSP S ++
Sbjct: 193 ELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP-DSQTLL 251
Query: 60 SGSYDKTVNVYDTRSPDPV---MSVNHGSPV--ESVLCL----PSGGIFVTGGG-LDVCI 109
S S+D TV +D R P + G+PV E L P+G G G V +
Sbjct: 252 SNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVV 311
Query: 110 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEM 155
WD G K+L+K H TV + + +I SAS D + + E+
Sbjct: 312 WDFKTG-KILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 80 (33.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 28 TTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV---NVYDTRSPDPVMSVNHG 84
T+ P+M + V A P + I SGS D+++ N Y ++S + G
Sbjct: 52 TSGLNAPIMELTGHSGEVFAVRFDPTAQHIA-SGSMDRSILLWNTYGQCENYGILSGHKG 110
Query: 85 SPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR-LIS 143
+ ++ S IF + + WD + G+ + ++ H + + S+ ++ G+ L+S
Sbjct: 111 AILDLQWSRDSKTIFSASADMTLASWD-IESGQRIRRYIGHEEVINSVEISKRGQEMLVS 169
Query: 144 ASLDHHAKIYE 154
AS D I++
Sbjct: 170 ASDDGTMGIWD 180
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 163 FTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
F+GG+D + +WD+ +++ H T+TSL ++ + L+S S D + +++ F
Sbjct: 209 FSGGIDNAIHVWDIRKKA-IVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPF 267
Query: 221 SPV--HTLDYP-SPV 232
+P H Y +PV
Sbjct: 268 APTNRHIRTYDGAPV 282
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 104 (41.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC-IWDM 112
S++++SGS+D+T+ +++ ++ V + H P+ SV G + V+ C IWD
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTG 165
G L V+ + GK ++ A+LD K+ T K + +TG
Sbjct: 200 KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 178 GKLLHKFTCH-HKT--VTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVL 233
GK L +T H +K +TS + GK ++S S D+ ++++ + + L+ + V+
Sbjct: 245 GKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVI 304
Query: 234 SI 235
S+
Sbjct: 305 SV 306
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 47/184 (25%), Positives = 75/184 (40%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL---PSGGIF 99
D VR T +P S +++S S DKT+ V+D + ++ V G V C P +
Sbjct: 172 DIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQ-NWVYCSAFSPDSSVL 230
Query: 100 VT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
+ G G V +WDM L+ K HH V + G L +AS D +++
Sbjct: 231 CSVGAGKAVFLWDM-DKYTLIRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTA 289
Query: 159 TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218
TV G L + GG + + V S+ G+ + S + D + + +
Sbjct: 290 TVLLELGHLFPPPSPIFAGG-------ANDRWVRSVAFCHDGRHIASVTDDRLVRFWSID 342
Query: 219 NFSP 222
SP
Sbjct: 343 EKSP 346
>MGI|MGI:1915333 [details] [associations]
symbol:Pak1ip1 "PAK1 interacting protein 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009968 "negative regulation
of signal transduction" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915333 GO:GO:0005886
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009968 GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
OMA:NDGFIKM ChiTaRS:PAK1IP1 EMBL:AY030406 EMBL:AF386076
EMBL:AK002852 EMBL:AK077941 EMBL:AK150747 EMBL:AK150919
EMBL:BC051498 IPI:IPI00120790 RefSeq:NP_080826.2 UniGene:Mm.24789
ProteinModelPortal:Q9DCE5 SMR:Q9DCE5 STRING:Q9DCE5
PhosphoSite:Q9DCE5 PaxDb:Q9DCE5 PRIDE:Q9DCE5
Ensembl:ENSMUST00000046951 GeneID:68083 KEGG:mmu:68083
UCSC:uc007qer.2 InParanoid:Q9DCE5 NextBio:326384 Bgee:Q9DCE5
CleanEx:MM_PAK1IP1 Genevestigator:Q9DCE5
GermOnline:ENSMUSG00000038683 Uniprot:Q9DCE5
Length = 382
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 47/182 (25%), Positives = 80/182 (43%)
Query: 40 TPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVE---SVLCLP-S 95
T + + +V +S V+SGS D+T+++YD + V HG+ V +V CL
Sbjct: 37 THHSHTASLSVLASNSRYVVSGSKDETIHIYDMKR-----KVEHGALVHHAGTVTCLKFH 91
Query: 96 GGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
G + G D +CIWD+ K L F H VT L + GK +S D + +
Sbjct: 92 GNQHLISGAEDGHICIWDVKRW-KCLKTFKAHRGHVTFLSIHPSGKLALSVGTDKTLRTW 150
Query: 154 EMTLKTVSSFTGGLD----VCIWDMLGGGKLL---HKFTCHHKTVTSLC-LASGGKRLIS 205
+ ++ S+F + + W GG ++ +K + S+ + GKR+ S
Sbjct: 151 NL-IEGRSAFIKNIKENAHIVEWSPSGGKYIVVVQNKVDVYRLGTASVSGTITNGKRISS 209
Query: 206 AS 207
+
Sbjct: 210 VT 211
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 101 (40.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 40/157 (25%), Positives = 72/157 (45%)
Query: 9 IVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTP---QDYVRAGT---VSPVS-SDIVISG 61
I A+W PS+ + T+ + + +M S + + A T V+P S S+++++G
Sbjct: 900 IRAVWLAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTG 959
Query: 62 SYDKTVNVYDT--RSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKL 118
S D TV V+ R + H +P+ V + + ++ + I D L GKL
Sbjct: 960 SEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITD-LASGKL 1018
Query: 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
H+ T H V+ + +A LIS LD ++++
Sbjct: 1019 RHRITHHRGPVSGIVVAGACDVLISGGLDRTICVWDL 1055
Score = 70 (29.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/110 (24%), Positives = 50/110 (45%)
Query: 135 ASGGKRLISASLDHHAKI----YEMTLKT-VSSFTGGLDVCIWDMLGGGKLLHKFTCHHK 189
A+GGK L + H + +T KT V S + +++ +WD+L G ++ H H
Sbjct: 1405 ATGGK-LSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEV-HTLAGHLG 1462
Query: 190 TVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239
V + +++ G +S S D ++E + +L P D+S+
Sbjct: 1463 PVIGVKVSADGSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISL 1512
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 107 (42.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 51 SPVSSDIVISGSYDKTVNVYD-TRSPD-----PVMSVNHGSPVESVLCLPSGGIFVTGGG 104
+P D +IS S DKT+ V+ TR D P + S S + L S G + G
Sbjct: 24 NPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGS 83
Query: 105 LD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
D + +WD L GK +F H K V S+ ++ ++++S S D K++
Sbjct: 84 WDQTLRLWD-LAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLW 133
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/60 (20%), Positives = 30/60 (50%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228
V +W+ L KL + H+ + ++ ++ G S D A ++++ + ++TL++
Sbjct: 175 VKVWN-LANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEH 233
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 30/108 (27%), Positives = 52/108 (48%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMS--VNHGSPVESVLCLPSGGIFVTGGGLD--VCIW 110
S + +G+ D + ++D S +P ++ + H S + S++ +G + + G +D VCIW
Sbjct: 194 SKTIFTGAEDSQIRLHDPNSSNPYIASLLGHSSFIFSLVASSNGDLLASSGSIDRKVCIW 253
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
D + KL FT H L + +L+S S D I+ LK
Sbjct: 254 D-IKTRKLDSSFTAHADQTWDLAFSPDSTKLVSVSDD--CSIHSYALK 298
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 34 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 93
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 94 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 152
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 208
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 209 EHEHVVECISWAP 221
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLG 114
D+V++G D V+D R+ + + H S V SVL P+ +TG + WD L
Sbjct: 267 DVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD-LR 325
Query: 115 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
GK + T H KTV ++ L +SAS D+ K
Sbjct: 326 YGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 63/239 (26%), Positives = 104/239 (43%)
Query: 17 SEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTV-----SPVSSDIVISGSYDKTVNVYD 71
+E Q++ ++KV + S+ T+ +P +S +++G+ D T ++D
Sbjct: 113 TEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWD 172
Query: 72 TRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKT 128
+ P+ ++ H + V V P G + TG +D + +WD G L H K
Sbjct: 173 CDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGS-MDNTIRLWDPKSGQCLGDALRGHSKW 231
Query: 129 VTSLC------LASGGK-RLISASLDHHAKIYEMTLK----TVSSFTGGLDVCIWDMLGG 177
+TSL + G K RL S+S D KI++ + T+S T + W GG
Sbjct: 232 ITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW---GG 288
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSID 236
LL+ + H +TV + S G R I+ L HA VN + T DY + + D
Sbjct: 289 QGLLYSGS-HDRTVRVWDINSQG-RCINI-LKSHA---HWVNHLSLST-DYALRIGAFD 340
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 33/124 (26%), Positives = 64/124 (51%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +++ V P +S+ + +GS D+TV ++D + + V + H P+ S+
Sbjct: 599 PLRIFAGHLADVTCTRFHP-NSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 657
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G TG D V +WD +G G ++ + H T+ +L + G+ L S S+D+
Sbjct: 658 SPNGRFLATGA-TDGRVLLWD-IGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTV 715
Query: 151 KIYE 154
++++
Sbjct: 716 RLWD 719
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 80 (33.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 165 GGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
GG+D + +WDML + + + H T+TSL ++ G L+S S+D +++ F P
Sbjct: 181 GGIDNQIKVWDMLRND-VRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVP 239
Query: 223 VHTL 226
L
Sbjct: 240 AQRL 243
Score = 75 (31.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 51 SPVSSD--IVISGSYDKTV---NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGL 105
S SSD + S YD+ + NV+ V+ + G+ +E S + G
Sbjct: 42 SQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDK 101
Query: 106 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMTLK 158
V +WDM G + F H V S+ + G ++I SAS D +++M K
Sbjct: 102 TVRVWDM-ETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSK 154
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 55 SDIVISGSYDKTVNVYDTRSPD-PVMSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDM 112
S ++ S S D TV ++DT + M H V SV+ + +G V IW+
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
G L H F H +V ++ A +RL SAS + KI++ ++ + G D C+
Sbjct: 377 TTG-LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCV 434
Score = 62 (26.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDY 228
V IW G + H F + SL + L SA D KI++M +S HT D
Sbjct: 581 VKIW-YAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDL 639
Query: 229 PSPV--LSIDVSM 239
+ + D SM
Sbjct: 640 DHEIQRIQFDKSM 652
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 3 HDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGT-VSPVSSDIVISG 61
H L ++ V LWD+ + Q+ + + +S Y+ GT V V+ V SG
Sbjct: 63 HQLGVVSVRLWDLENGKQIKSIDAGPV--DAWTLAFSPDSQYLATGTHVGKVNIFGVESG 120
Query: 62 SYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLL 119
+ ++ DTR G + S+ P G ++ G +D + I+D + GKLL
Sbjct: 121 KKEYSL---DTR----------GKFILSIAYSPDGK-YLASGAIDGIINIFD-IATGKLL 165
Query: 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-------TLKTVSSFTGGLDVC-- 170
H H + SL + + L++AS D + KIY++ TL +S+ + C
Sbjct: 166 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 225
Query: 171 --------------IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
+WD+ G +H F H V + G +++S D IY+
Sbjct: 226 DTHFVSSSSDKSVKVWDV-GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
>ZFIN|ZDB-GENE-110411-237 [details] [associations]
symbol:kif21a "kinesin family member 21A"
species:7955 "Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 ZFIN:ZDB-GENE-110411-237 GO:GO:0005524 GO:GO:0005875
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005874 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00680000099754 EMBL:BX957352 EMBL:FP102117
IPI:IPI00506685 Ensembl:ENSDART00000004087 Uniprot:F1QWX6
Length = 1647
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113
+ D++ +GS D+T V++ + +MS+ G P V S + T + +WD+
Sbjct: 1332 TDDLMFTGSKDRTCKVWNLVTGQEIMSLG-GHPNNVVSVRYSSSLVFTVSTSYIKVWDIR 1390
Query: 114 GGGKLLHKFTCHHKTVTS-LCLASGGKRL-ISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
K + T T +C AS + + I A + +IY TV G V +
Sbjct: 1391 DSAKCIRTLTSSGLVNTGDMCAASTNRTVTIPAGENQINQIYLNPSGTVLYAAAGNSVRV 1450
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCL---ASGGKRLISASLDHHAKIYE-----MVNFSPV 223
WD L K T H V L + +G +I+ S DH+ K+++ M + SP
Sbjct: 1451 WD-LRRFVCTGKLTGHLGPVMCLTVDQTGNGQDLVITGSKDHYIKMFDVTEGAMGSISPT 1509
Query: 224 HTLDYP 229
H + P
Sbjct: 1510 HNFEPP 1515
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ T+ + V + H PV ++
Sbjct: 418 PLRIYAGHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAF 476
Query: 93 LPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 150
P+G ++ G D + +WD L G L + H +TSL + + SAS+D+
Sbjct: 477 SPNGK-YLASAGEDQRLKLWD-LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSV 534
Query: 151 KIYEM 155
+++++
Sbjct: 535 RVWDI 539
Score = 89 (36.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGG-GLDV 107
+SP S S S+D+T ++ P+ + H V+ V P+ TG V
Sbjct: 392 ISPCSLYFA-SASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTV 450
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+W G + FT H V +L + GK L SA D K++++ T+
Sbjct: 451 RLWSTQQGNSV-RLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Score = 69 (29.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+WD L G L + H +TSL + + SAS+D+ +++++ N
Sbjct: 494 LWD-LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 541
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 43/174 (24%), Positives = 78/174 (44%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLC 92
PL +Y+ V P +S+ + +GS DKTV ++ + + V + H PV +
Sbjct: 415 PLRIYAGHLAGVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAF 473
Query: 93 LPSGGIFVTGGGLDVC-IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
P+G V+ G + +WD L G L H +TS+ + + SAS+D+ +
Sbjct: 474 SPNGQYLVSAGEDQLLKLWD-LASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVR 532
Query: 152 IYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
I+++ K S+ G +LL +T TV ++ +G + L++
Sbjct: 533 IWDIKSKHNSTPADG---------SSSELLGVYTGQMSTVLNVQFMAGSRLLVT 577
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 45/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
+G + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS-SSNDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 52/186 (27%), Positives = 81/186 (43%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCI 109
SP +S +++GS D T ++D + P+ ++ H + V V P I TG +D I
Sbjct: 143 SPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGS-MDNTI 201
Query: 110 --WDMLGGGKLLHKFTCHHKTVTSLC-----LA--SGGKRLISASLDHHAKIYEMTLKTV 160
WD G + H K + +LC LA SG L S S D+ +I+ + L+T+
Sbjct: 202 RFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTL 261
Query: 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
G I + GG+ + + KT+ + A GK L L HA ++
Sbjct: 262 LFTLSGHTAPITCVRWGGQNWIYSSSYDKTIR-IWDAKDGKCL--HILKGHAARVNHLSL 318
Query: 221 SPVHTL 226
S H L
Sbjct: 319 STEHVL 324
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 82 (33.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 37/145 (25%), Positives = 60/145 (41%)
Query: 24 FTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVY--DTRSPDPVMSV 81
F H Y+ Y +D V + SP +++ S S D+TV ++ D R
Sbjct: 5 FKPHARAYR-----YVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKA 58
Query: 82 NHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H +PV SV G T + +W M + L+ H V + G+
Sbjct: 59 -HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 141 LISASLDHHAKIYEMTLKT-VSSFT 164
++S S D KI++ T K V++F+
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFS 141
Score = 75 (31.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V +WD+ KLL + H V + G LI+AS D KI +++ ++TL
Sbjct: 168 VKVWDVRVN-KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 226
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 227 HTGPVFTVSFS 237
>UNIPROTKB|J9P7Y1 [details] [associations]
symbol:KIF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00680000099754 EMBL:AAEX03015142
Ensembl:ENSCAFT00000047561 Uniprot:J9P7Y1
Length = 1565
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1214 INPFPASKGIRTSPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1273
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1274 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1332
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1333 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1389
Query: 195 CL--ASGGKRLI-SASLDHHAKIYEMVN-----FSPVHTLDYP 229
+ S G+ LI + S DH+ K++++ SP H + P
Sbjct: 1390 TVDQISNGQDLIVTGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1432
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
V LW I + + T HT+ P + VR T P +++++GS ++ V
Sbjct: 45 VNLWSINKPNCIMSLTGHTS-----------PVESVRLNT--P--EELIVAGSQSGSIRV 89
Query: 70 YDTRSPDPVMSV-NHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHH 126
+D + + ++ H + + S+ P G FV G D + +WD+ G + ++ H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKG-CVFRYRGHS 147
Query: 127 KTVTSLCLASGGKRLISASLDHHAKIYEMTL-KTVSSFTG 165
+ V L + GK L SA+ DH K++++T K +S F G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>ZFIN|ZDB-GENE-040426-2906 [details] [associations]
symbol:nedd1 "neural precursor cell expressed,
developmentally down-regulated 1" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005813
"centrosome" evidence=IDA] [GO:0071539 "protein localization to
centrosome" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-2906 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071539 GeneTree:ENSGT00390000001561
OMA:FSPIRDD EMBL:CR385081 IPI:IPI00554335
Ensembl:ENSDART00000027740 ArrayExpress:F1QAL1 Bgee:F1QAL1
Uniprot:F1QAL1
Length = 677
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 48/167 (28%), Positives = 73/167 (43%)
Query: 12 LWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYD 71
+WD S V F H+ + V + +S+ YV + S + +V+S K+
Sbjct: 16 IWDSSSMTVVEQFNPHSATHPVAQVCWSSSNQYVVSA--SSIGDKLVVSSL--KS----- 66
Query: 72 TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKT- 128
SP PVM + G ++ + L S F+ GGLD V IWD+ K LH+ HK
Sbjct: 67 --SPVPVMELGEGKK-QTRVSLNSTSQFLVSGGLDNTVNIWDLKT--KRLHRTLKDHKEE 121
Query: 129 VTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS-FTGGLDVCIWDM 174
VT + G + S S ++ +T S F G +V I D+
Sbjct: 122 VTCVSFNGGDSYIASGSTSGDIILHSITTNLSSKPFGHGPNVPIHDL 168
>UNIPROTKB|F1PRN6 [details] [associations]
symbol:KIF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00680000099754 EMBL:AAEX03015142
Ensembl:ENSCAFT00000016395 Uniprot:F1PRN6
Length = 1663
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1312 INPFPASKGIRTSPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1371
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1372 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1430
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1431 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1487
Query: 195 CL--ASGGKRLI-SASLDHHAKIYEMVN-----FSPVHTLDYP 229
+ S G+ LI + S DH+ K++++ SP H + P
Sbjct: 1488 TVDQISNGQDLIVTGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1530
>UNIPROTKB|F1PPT2 [details] [associations]
symbol:KIF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00680000099754 OMA:HKIRDTQ
EMBL:AAEX03015142 Ensembl:ENSCAFT00000016465 Uniprot:F1PPT2
Length = 1677
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 21 VSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS 80
++ F I PL + + +A + D++ +GS D+T V++ + +MS
Sbjct: 1326 INPFPASKGIRTSPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMS 1385
Query: 81 VN-HGSPVESV-LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASG 137
+ H + V SV C + +F + +WD+ K + T + T+ C AS
Sbjct: 1386 LGGHPNNVVSVKYCNYTSLVFTVSTSY-IKVWDIRDSAKCIRTLTSSGQVTLGDACSAST 1444
Query: 138 GKRLISASLDHHAKIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ + S ++ +I ++ L +F G V +WD L + K T H V L
Sbjct: 1445 SRTVAIPSGEN--QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCL 1501
Query: 195 CL--ASGGKRLI-SASLDHHAKIYEMVN-----FSPVHTLDYP 229
+ S G+ LI + S DH+ K++++ SP H + P
Sbjct: 1502 TVDQISNGQDLIVTGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1544
>MGI|MGI:1926135 [details] [associations]
symbol:Coro7 "coronin 7" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1926135 GO:GO:0016021 GO:GO:0005829
GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016023 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 OrthoDB:EOG49S65R
OMA:EVEFARC EMBL:AK018739 EMBL:AK040408 EMBL:AK150051 EMBL:BC061006
IPI:IPI00135390 RefSeq:NP_084481.3 UniGene:Mm.325512
ProteinModelPortal:Q9D2V7 SMR:Q9D2V7 STRING:Q9D2V7
PhosphoSite:Q9D2V7 PaxDb:Q9D2V7 PRIDE:Q9D2V7
Ensembl:ENSMUST00000038552 GeneID:78885 KEGG:mmu:78885
UCSC:uc007xzy.1 InParanoid:Q9D2V7 ChiTaRS:CORO7 NextBio:349664
Bgee:Q9D2V7 CleanEx:MM_CORO7 Genevestigator:Q9D2V7
GermOnline:ENSMUSG00000039637 Uniprot:Q9D2V7
Length = 922
Score = 90 (36.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 148 HHAKIYEMTLK-----TVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 202
H KIY + ++S + L V IWD+ G + L K H + SL + GK+
Sbjct: 590 HTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERL-KLQGHQDQIFSLAWSPDGKQ 648
Query: 203 LISASLDHHAKIYEMVNFSPVHTLDYPSP 231
L + D H ++YE + SP+ + P P
Sbjct: 649 LATVCKDGHVRVYEPRS-SPLPLQEGPGP 676
Score = 73 (30.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 32/120 (26%), Positives = 54/120 (45%)
Query: 51 SPVSSDIVISGSYDKTVNVY---DTRSPDP-VMSVNHGS---PVESVLCLPS-GGIFVTG 102
SP ++ SGS D+T+ ++ T P V V G PVE + P+ G+ V+
Sbjct: 86 SPFDDFLLASGSADRTIKLWRLSGTGEALPSVPGVVLGPEELPVEVLQFHPTVDGVLVST 145
Query: 103 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS 162
G V +WD+ + L + H V S + G + +A D +I++ +T +S
Sbjct: 146 AGKTVKVWDV-AKQQPLTELEAHKDLVQSAVWSRDGAIVGTACKDKQLRIFDPRARTQAS 204
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 98 (39.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/111 (24%), Positives = 50/111 (45%)
Query: 52 PVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCL-PSGGIFVTGGGLDVCIW 110
P S +++S YD T+ ++ S ++ H + LC+ P G V ++
Sbjct: 7 PQHSVLLVSSGYDHTIRFWEALSGICSRTIQHADSQVNRLCISPDKKFLAAAGNPHVRLY 66
Query: 111 DMLGGGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
D+ ++ L F H VT++ GK L ++S D K+++M +V
Sbjct: 67 DINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSV 117
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 157 LKTVSSFTGGLDVCIWDMLGGGKLLHK-FTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
+K +++ + V IW +L + H + V ++ L++AS DH A+++
Sbjct: 227 VKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLW 286
Query: 216 EM 217
E+
Sbjct: 287 EL 288
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
+G + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DQTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G LL + + +TV +A+ + A L
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 100 (40.3 bits), Expect = 0.00040, P = 0.00040
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 64 DKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLH 120
DKTV ++ + + V + H PV S+ P+G ++ G D + +WD L G L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGK-YLASAGEDQRLKLWD-LASGTLFK 58
Query: 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ H ++TSL + + SAS+D+ +++++
Sbjct: 59 ELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 93
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 103 (41.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 32/129 (24%), Positives = 64/129 (49%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVT 101
DYV A ++ S + I+ + + +Y+ S + S+ H +PV ++ P+ + T
Sbjct: 62 DYVTALAITSDSKKL-IAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLAT 120
Query: 102 GG--GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR--LISASLDHHAKIYEM-T 156
GG GL V +WD + G + H F H +++LC L S + D +++++ +
Sbjct: 121 GGAEGL-VKVWD-IAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNS 178
Query: 157 LKTVSSFTG 165
++++ F G
Sbjct: 179 SRSMAVFEG 187
Score = 56 (24.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+ ++S +G + IW++ + + H + L S G +++SA+ D K++ +
Sbjct: 520 RQLASGSGDRTIRIWNV-DTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Query: 218 VNFSPVHTLD 227
+ V TLD
Sbjct: 579 SSGECVATLD 588
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 79 (32.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
+ G D + IWD + KL+ + H+ V G LIS S D KI +++
Sbjct: 203 SSGADNTIKIWD-IRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGR 261
Query: 222 PVHTLD-YPSPVLSIDVS 238
++TL + PVL++ S
Sbjct: 262 LIYTLHGHKGPVLTVTFS 279
Score = 78 (32.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/120 (24%), Positives = 53/120 (44%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFV 100
+D + +P + + +GS DK++ +++ V H + V PSG + V
Sbjct: 18 KDVISCADFNPNNKQLA-TGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL-V 75
Query: 101 TGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLK 158
D V +W G+ F H +V S+ + G+RL++AS D K++ + K
Sbjct: 76 ASSSRDQTVRLWTPSIKGEST-VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK 134
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 88 (36.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 41/161 (25%), Positives = 66/161 (40%)
Query: 8 LIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
L A WD + + F H Y+ Y +D V + SP +++ S S D+TV
Sbjct: 33 LATASWD--TFLMLWNFKPHARAYR-----YVGHKDVVTSVQFSP-HGNLLASASRDRTV 84
Query: 68 NVY--DTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGG-GLDVCIWDMLGGGKLLHKFTC 124
++ D R H +PV SV G T + +W M + L+
Sbjct: 85 RLWIPDKRGKFSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ-RFLYSLYR 142
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT-VSSFT 164
H V + G+ ++S S D KI++ T K V++F+
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Score = 67 (28.6 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD- 227
V +WD+ KLL + H V + L++AS D KI +++ ++TL
Sbjct: 210 VKVWDVRVN-KLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG 268
Query: 228 YPSPVLSIDVS 238
+ PV ++ S
Sbjct: 269 HTGPVFTVSFS 279
>MGI|MGI:109234 [details] [associations]
symbol:Kif21b "kinesin family member 21B" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003777 "microtubule motor activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001752
InterPro:IPR015943 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00129 SMART:SM00320 MGI:MGI:109234
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030425
eggNOG:COG2319 GO:GO:0005874 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR009053 SUPFAM:SSF46579 EMBL:AC124550
HOVERGEN:HBG052247 KO:K10395 HOGENOM:HOG000280728 CTD:23046
EMBL:AF202893 EMBL:U71298 IPI:IPI00135132 RefSeq:NP_001034561.1
UniGene:Mm.276135 IntAct:Q9QXL1 PhosphoSite:Q9QXL1 PaxDb:Q9QXL1
PRIDE:Q9QXL1 GeneID:16565 KEGG:mmu:16565 UCSC:uc007cul.1
InParanoid:Q9QXL1 ChiTaRS:KIF21B NextBio:290069
Genevestigator:Q9QXL1 GermOnline:ENSMUSG00000041642 Uniprot:Q9QXL1
Length = 1668
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 43/210 (20%), Positives = 92/210 (43%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-L 91
PL S + + + + +++ +GS D++ +++ + + ++ H + V S+
Sbjct: 1299 PLQCISMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKY 1358
Query: 92 CLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS-LCLASGGKRLISASLDHHA 150
C SG +F + +WD+ K + T + ++ C+A+ + + SA +H
Sbjct: 1359 CSHSGLVFSVSSSY-IKVWDIRDSAKCIRTLTSSGQVISGDACIATSTRAITSAQGEH-- 1415
Query: 151 KIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR---LI 204
+I +M L S G V IW+ L + + K T H V L + + ++
Sbjct: 1416 QINQMALSPSGSMLYVASGNAVRIWE-LNRFQPIGKLTGHIGPVMCLTVTQTSNQHDLVV 1474
Query: 205 SASLDHHAKIYEMVN-----FSPVHTLDYP 229
+ S DH+ K++++ + P H + P
Sbjct: 1475 TGSKDHYVKMFQLGDCVTGTIGPTHNFEPP 1504
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVC- 108
S +S +I+ISGS D+T+ V+D S V ++ H S V C+ G V G D
Sbjct: 1041 SQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR---CMHLHGSKVVSGSRDATL 1097
Query: 109 -IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY----EMTLKTVSSF 163
+WD + G LH H V C+ GK ++S + D+ KI+ + L T+
Sbjct: 1098 RVWD-IEQGSCLHVLVGHLAAVR--CVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGH 1154
Query: 164 TGGLDVCIWDMLG--GGKL--------LHKFTCHHKTVTSLCLASGGKR----LISASLD 209
T + +D L G L + C H + L SG + L+S + D
Sbjct: 1155 TNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNAD 1214
Query: 210 HHAKIYEMVNFSPVHTLDYPS 230
K++++ + TL P+
Sbjct: 1215 STVKVWDITTGQCLQTLSGPN 1235
>MGI|MGI:109188 [details] [associations]
symbol:Kif21a "kinesin family member 21A" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003777 "microtubule motor activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001752
InterPro:IPR015943 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00129 SMART:SM00320 MGI:MGI:109188
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0030425 eggNOG:COG2319 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00680000099754 CTD:55605 HOVERGEN:HBG052247 KO:K10395
ChiTaRS:KIF21A EMBL:AF202892 EMBL:BC060698 EMBL:BC062896
EMBL:AK129426 EMBL:AK049303 EMBL:AK047350 IPI:IPI00454081
IPI:IPI00454082 IPI:IPI00454083 IPI:IPI00454084
RefSeq:NP_001102510.1 RefSeq:NP_001102511.1 RefSeq:NP_001102512.1
RefSeq:NP_057914.2 UniGene:Mm.41379 ProteinModelPortal:Q9QXL2
SMR:Q9QXL2 IntAct:Q9QXL2 STRING:Q9QXL2 PhosphoSite:Q9QXL2
PaxDb:Q9QXL2 PRIDE:Q9QXL2 Ensembl:ENSMUST00000088614
Ensembl:ENSMUST00000109287 Ensembl:ENSMUST00000109288 GeneID:16564
KEGG:mmu:16564 UCSC:uc007xhs.2 UCSC:uc007xht.2 UCSC:uc007xhv.2
HOGENOM:HOG000280728 InParanoid:Q9QXL2 OMA:HKIRDTQ
OrthoDB:EOG479F67 NextBio:290065 Bgee:Q9QXL2 CleanEx:MM_KIF21A
Genevestigator:Q9QXL2 GermOnline:ENSMUSG00000022629 Uniprot:Q9QXL2
Length = 1672
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 49/210 (23%), Positives = 92/210 (43%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-L 91
PL + + +A + D++ +GS D+T V++ + +MS+ H + V SV
Sbjct: 1334 PLQCVHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMSLGVHPNNVVSVKY 1393
Query: 92 CLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHK-TVTSLCLASGGKRLISASLDHHA 150
C + +F + +WD+ K + T + T+ C AS + + S + +
Sbjct: 1394 CNYTSLVFTVSTSY-IKVWDIRESAKCIRTLTSSGQVTLGEACSASTSRTVAIPSGE--S 1450
Query: 151 KIYEMTLKTVSSF---TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLC---LASGGKRLI 204
+I ++ L +F G V +WD L + K T H V L +++G +I
Sbjct: 1451 QINQIALNPTGTFLYAASGNAVRMWD-LKRFQSTGKLTGHLGPVMCLTVDQISNGQDLII 1509
Query: 205 SASLDHHAKIYEMVN-----FSPVHTLDYP 229
+ S DH+ K++++ SP H + P
Sbjct: 1510 TGSKDHYIKMFDVTEGALGTVSPTHNFEPP 1539
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 60 SGSYDKTVNVYDTRSPDPV-MSVNHGSPVESVLCLPSGGIFVTGGGLDVC-IWDMLGGGK 117
+ S+D+T ++D P+ + V H + V+ V P+ TG +WD+ GG
Sbjct: 462 TASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGT 521
Query: 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ F HH V++LC+++ G L SA K++++
Sbjct: 522 V-RVFNAHHSPVSALCMSADGLSLASADESGIIKVWDL 558
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 115 (45.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 83 HGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKR 140
H V ++ P G + G+D V IWD+ GK + + H K V +C ++ G +
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSK 340
Query: 141 LISASLDHHAKIYEM-TLKTVSSFTGG 166
++A D + K ++ T + +S+F+ G
Sbjct: 341 FLTAGYDKNIKYWDTETGQVISTFSTG 367
Score = 38 (18.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIY 215
H ++ S+ + G L + SLD+ IY
Sbjct: 454 HMHSMPSISVHPNGNWLAAQSLDNQILIY 482
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 105 (42.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP-SGGIFVT-GGGLDVCIWDMLG 114
++ISGS D TV V+D + + + ++ H E+VL L + GI VT + +WDM+
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHC--EAVLHLRFANGIMVTCSKDRSIAVWDMVS 331
Query: 115 GGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTG 165
+ + + H+ ++ + + ++SAS D K++ M TL+ V + G
Sbjct: 332 PRDITIRRVLVGHRAAVNV-VDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAG 383
Score = 51 (23.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+WD + G L H + V C+ KR++S + D K++++
Sbjct: 409 LWD-IHSGVCLRVLEGHEELVR--CIRFDEKRIVSGAYDGKIKVWDL 452
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 105 (42.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLP-SGGIFVT-GGGLDVCIWDMLG 114
++ISGS D TV V+D + + + ++ H E+VL L + GI VT + +WDM+
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHC--EAVLHLRFANGIMVTCSKDRSIAVWDMVS 331
Query: 115 GGKL-LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTG 165
+ + + H+ ++ + + ++SAS D K++ M TL+ V + G
Sbjct: 332 PRDITIRRVLVGHRAAVNV-VDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAG 383
Score = 51 (23.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
+WD + G L H + V C+ KR++S + D K++++
Sbjct: 409 LWD-IHSGVCLRVLEGHEELVR--CIRFDEKRIVSGAYDGKIKVWDL 452
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 56/209 (26%), Positives = 89/209 (42%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDM-L 113
S + +S S+DKTVNV+ P MS+ H + + L S ++ D + L
Sbjct: 923 SSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSSAKMIKL 982
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGL------ 167
G+++ F H +V SL L S + LI+ S D +++++T S GGL
Sbjct: 983 ETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVST 1042
Query: 168 ------DV-----CIWDMLG-----GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 211
D C + L GG+ LH+ H V SL A +L +A+
Sbjct: 1043 LAITSNDAFVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLFAATKSK- 1101
Query: 212 AKIYEMVNFSPVHTLD--YPSPVLSIDVS 238
Y++ N + LD P P+ S+ +S
Sbjct: 1102 VFCYDIHNGQMIDVLDTAQPFPICSLKIS 1130
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 106 (42.4 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESV---------LCLPSGGIFVTGGGLD-- 106
V+S S DKT+ V+D S PV G PV S+ + + S G F G D
Sbjct: 33 VLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
+ +WD L G +F H K V S+ ++ ++++S S D K++
Sbjct: 93 LRLWD-LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLW 138
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
V +W+ LG +L H V ++ ++ G S D A ++++ ++TL
Sbjct: 180 VKVWN-LGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 236
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 106 (42.4 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESV---------LCLPSGGIFVTGGGLD-- 106
V+S S DKT+ V+D S PV G PV S+ + + S G F G D
Sbjct: 33 VLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 107 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
+ +WD L G +F H K V S+ ++ ++++S S D K++
Sbjct: 93 LRLWD-LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLW 138
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00062
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
V +W+ LG +L H V ++ ++ G S D A ++++ ++TL
Sbjct: 180 VKVWN-LGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 236
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 112 (44.5 bits), Expect = 0.00067, P = 0.00067
Identities = 45/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
+G + + + + +WD G + + H V+S+ + G ++SAS D K
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 112 (44.5 bits), Expect = 0.00067, P = 0.00067
Identities = 45/193 (23%), Positives = 89/193 (46%)
Query: 41 PQDYVRAGTVSPVSS-------DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLC 92
P+ Y +G SPV+ +++S S D T+ V+D + D ++ H V+ +
Sbjct: 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 158
Query: 93 LPSGGIFVT-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 151
SG + + + + +WD G + + H V+S+ + G ++SA+ D K
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217
Query: 152 IYEM-TLKTVSSFTGGLD-VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLD 209
++E+ T V +FTG + V + G L+ + + +TV +A+ + A L
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVAT---KECKAELR 273
Query: 210 HHAKIYEMVNFSP 222
H + E ++++P
Sbjct: 274 EHEHVVECISWAP 286
>TAIR|locus:2062994 [details] [associations]
symbol:AT2G46290 "AT2G46290" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009506 EMBL:CP002685 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 GO:GO:0080008
KO:K03246 OMA:ATVAGWS IPI:IPI00519717 RefSeq:NP_182152.2
UniGene:At.36529 ProteinModelPortal:F4II66 SMR:F4II66 PRIDE:F4II66
EnsemblPlants:AT2G46290.1 GeneID:819237 KEGG:ath:AT2G46290
Uniprot:F4II66
Length = 355
Score = 111 (44.1 bits), Expect = 0.00069, P = 0.00069
Identities = 50/192 (26%), Positives = 80/192 (41%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWD-ML 113
S +I+GS D+T ++D +S + + G+P SV F G L V D +
Sbjct: 91 SSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSV-------DFSVGDHLAVITTDHFV 143
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSS--FTGGLDVCI 171
G +H + G L+ S D KI ++ +GG D I
Sbjct: 144 GTSSAIHVKRIAEDPEDQV----GDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAI 199
Query: 172 --WDMLGGGKLLHKF---TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
WD GKLL + H + +TSLC A+ ++ S D AK+++M + + T
Sbjct: 200 RIWDA-ETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTY 258
Query: 227 DYPSPVLSIDVS 238
PV ++ +S
Sbjct: 259 TTVVPVNAVAMS 270
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00069
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDML 113
S +++SGS D TV ++ + H PV SV + G+ ++G + IW L
Sbjct: 363 STLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS-L 421
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT-VSSFTGGLDVCIW 172
LH F+ H V SL LA RL S SLD K +++ K V + G ++ +W
Sbjct: 422 ETNTCLHTFSAHIGPVQSLALADS--RLFSCSLDGTIKQWDIEKKKCVHTLFGHIEG-VW 478
Query: 173 DM 174
++
Sbjct: 479 EI 480
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00069
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG 115
+ISGS DKT+ +++ R+ + + S+ HG +SVLCL + G D V +W GG
Sbjct: 326 LISGSMDKTIRIWNYRTSECI-SILHGH-TDSVLCLTFDSTLLVSGSADCTVKLWHFSGG 383
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT----LKTVSSFTGGL---- 167
++ + H V S+ + ++S S D KI+ + L T S+ G +
Sbjct: 384 KRITLRG--HTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 168 --DVCIWDMLGGGKL----LHKFTCHHKTVTSLC----LASGGKRLISASLDHHAKIYEM 217
D ++ G + + K C H + +A+ RLIS + D K++E
Sbjct: 442 LADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEA 501
Query: 218 VNFSPVHTL-DYPSPVLSI 235
VHTL ++ PV S+
Sbjct: 502 CEC--VHTLKNHSEPVTSV 518
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 56 DIVISGSYDKTVNVYDTRSPD----PVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--VC 108
D++ S SYD+ ++V+D R PD P SV+ H P+ SV P + D +
Sbjct: 248 DLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIA 307
Query: 109 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI-SASLDHHAKIYEMT 156
+WD+ + LH H VT + + + ++ S S D +++++
Sbjct: 308 LWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 87 (35.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238
LLH F H V SL G L ++S+D KI++ +N S + T+ + V+S+DV
Sbjct: 88 LLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVP 147
Query: 239 M 239
M
Sbjct: 148 M 148
Score = 62 (26.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 94 PSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
P G GL++ I+D+ T H + + LC + G+ + +AS D +I
Sbjct: 23 PDGQFLAITQGLNILIYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATASDDFSVEII 82
Query: 154 EMTLKTVSSFTG 165
++ + +F G
Sbjct: 83 HLSYGLLHTFIG 94
>UNIPROTKB|F1M408 [details] [associations]
symbol:F1M408 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 GO:GO:0005524 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR009053
SUPFAM:SSF46579 IPI:IPI00363445 Ensembl:ENSRNOT00000047097
ArrayExpress:F1M408 Uniprot:F1M408
Length = 1603
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 43/209 (20%), Positives = 93/209 (44%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-L 91
PL S + + + + +++ +GS D++ +++ + + ++ H + V S+
Sbjct: 1280 PLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKY 1339
Query: 92 CLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS-LCLASGGKRLISASLDHHA 150
C SG +F V +WD+ K + T + ++ C+A+ + + S+ +H
Sbjct: 1340 CSHSGLVFSVSSSY-VKVWDIRDSAKCIRTLTSSGQVISGDACMATSTRAITSSQGEH-- 1396
Query: 151 KIYEMTLK---TVSSFTGGLDVCIWDM--LGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
+I +M L T+ G V IW++ GKL TVT + ++ +++
Sbjct: 1397 QINQMALSPSGTMLYVASGNAVRIWELNRFQPGKLTGHIPVMCLTVTQI--SNQHDLVVT 1454
Query: 206 ASLDHHAKIYEMVN-----FSPVHTLDYP 229
S DH+ K++++ + P H + P
Sbjct: 1455 GSKDHYVKMFQLGDCVTGTIGPTHNFEPP 1483
>TAIR|locus:2063009 [details] [associations]
symbol:TRIP-1 "AT2G46280" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0046686 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009651 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 EMBL:AC005397
GO:GO:0080008 EMBL:U36765 EMBL:AF285835 EMBL:AF370485 EMBL:AY064633
IPI:IPI00547942 PIR:H84900 PIR:S60256 RefSeq:NP_182151.1
RefSeq:NP_850450.1 UniGene:At.21646 ProteinModelPortal:Q38884
SMR:Q38884 IntAct:Q38884 STRING:Q38884 PaxDb:Q38884 PRIDE:Q38884
EnsemblPlants:AT2G46280.1 EnsemblPlants:AT2G46280.2 GeneID:819236
KEGG:ath:AT2G46280 GeneFarm:2828 TAIR:At2g46280
HOGENOM:HOG000231322 InParanoid:Q38884 KO:K03246 OMA:GKKRINR
PhylomeDB:Q38884 ProtClustDB:CLSN2683457 Genevestigator:Q38884
HAMAP:MF_03008 Uniprot:Q38884
Length = 328
Score = 94 (38.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 100 VTGGGLD--VCIWDMLGGGKLLHKF---TCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
+ GG D + IWD GKLL + H K +TSLC A+ ++ SLD AK+++
Sbjct: 163 IVSGGEDKVIRIWDA-ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Query: 155 M-TLKTVSSFT 164
M TL + ++T
Sbjct: 222 MRTLTLLKTYT 232
Score = 54 (24.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESV 90
S +I+GS D+T ++D +S + + +P SV
Sbjct: 64 SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
>RGD|1306206 [details] [associations]
symbol:Kif21b "kinesin family member 21B" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 RGD:1306206 GO:GO:0005524 GO:GO:0005875
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005874 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00680000099754 IPI:IPI00870772
Ensembl:ENSRNOT00000011324 ArrayExpress:F1M5N7 Uniprot:F1M5N7
Length = 1644
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 43/209 (20%), Positives = 93/209 (44%)
Query: 34 PLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESV-L 91
PL S + + + + +++ +GS D++ +++ + + ++ H + V S+
Sbjct: 1280 PLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKY 1339
Query: 92 CLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTS-LCLASGGKRLISASLDHHA 150
C SG +F V +WD+ K + T + ++ C+A+ + + S+ +H
Sbjct: 1340 CSHSGLVFSVSSSY-VKVWDIRDSAKCIRTLTSSGQVISGDACMATSTRAITSSQGEH-- 1396
Query: 151 KIYEMTLK---TVSSFTGGLDVCIWDM--LGGGKLLHKFTCHHKTVTSLCLASGGKRLIS 205
+I +M L T+ G V IW++ GKL TVT + ++ +++
Sbjct: 1397 QINQMALSPSGTMLYVASGNAVRIWELNRFQPGKLTGHIPVMCLTVTQI--SNQHDLVVT 1454
Query: 206 ASLDHHAKIYEMVN-----FSPVHTLDYP 229
S DH+ K++++ + P H + P
Sbjct: 1455 GSKDHYVKMFQLGDCVTGTIGPTHNFEPP 1483
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00081
Identities = 55/225 (24%), Positives = 93/225 (41%)
Query: 9 IVALWDIPSEAQVSTFT-NHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
++ LWD + + T + +H P Y Q+ V+A P S ++ISG YD +V
Sbjct: 643 LIKLWDTTTGSLQKTLSGSH------PKRRYQIQQEQVKAMAFLP-DSKLIISGYYDGSV 695
Query: 68 NVYDTRSPDPVMSVNH-G-SPVESVLCLP--SGGIFVTGGGLDVCIWDMLGGGKLLHKFT 123
++DT + D +H G S V P GG + G + G T
Sbjct: 696 MLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFG-WSRDST 754
Query: 124 CHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLD--VCIWDMLGGGKLL 181
C + A+G + I H + + TG +D V +W+ G L
Sbjct: 755 C----IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGD-LE 809
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
F H TV S+ ++S G++++S S++ K+++ + TL
Sbjct: 810 KTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTL 853
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 102 (41.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 51 SPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLD--V 107
SP S + +G++ VN++ S S++ G + S+ P G ++ G +D +
Sbjct: 115 SP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGII 172
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
I+D + GKLLH H + SL + + L++AS D + KIY++
Sbjct: 173 NIFD-IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSI 235
H V ++ +S+S D K++++ + VHT D+ V +
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 112 (44.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 39/134 (29%), Positives = 65/134 (48%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYD-TRSPDPVMSVNHGSPVESVLCLPSGGIFV 100
Q +R + SP + S + DK + ++D R + V HG V+ V P + V
Sbjct: 209 QSKIRGLSFSPTDLKLA-SCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 101 TGG-GLDVCIWDMLGGGKLLHKFTCH-HK-TVTSLCLASGGKRLISASLDHHAKIYEM-T 156
+GG ++ IWD + T H HK TV+ + G ++SAS D K++++ T
Sbjct: 268 SGGKDNNIKIWDAKSSQNIT---TLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRT 324
Query: 157 LKTVSSFTG-GLDV 169
+K + +F G G +V
Sbjct: 325 MKEMQTFKGHGKEV 338
Score = 41 (19.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/55 (32%), Positives = 23/55 (41%)
Query: 185 TCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD--YPSPVLSIDV 237
+ H V SL G L S S DH K + N P T+ Y +P S D+
Sbjct: 376 SAHDADVWSLSWHPIGHILASGSNDHTTKFWSR-N-RPADTMKDKYNNPNASKDI 428
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 45/191 (23%), Positives = 78/191 (40%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSP--VESVLCLPSGGIFV 100
D VR T +P S +++S S DK + V+D + ++ V G P V S P +
Sbjct: 176 DIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLC 235
Query: 101 T-GGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT 159
+ G V +W+M L+ K HH V S + G L +AS D +++ +
Sbjct: 236 SVGASKAVLLWNM-DKYTLIRKLEGHHNDVVSCEFSPDGALLATASYDTRVIVWDHQRGS 294
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN 219
+ G L + GG + + V S+ + G+ + S S D + + +
Sbjct: 295 ILLELGHLFPPPSPIFAGG-------ANDRWVRSVSFCADGRHIASVSDDRLVRFWSIEE 347
Query: 220 FSPVHTLDYPS 230
+P P+
Sbjct: 348 RAPQAVASLPN 358
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 91 (37.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 37 LYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLP 94
L+S + A + P ++ +++G DK V V+D +S + +++ H V SV+ P
Sbjct: 225 LHSASIPGILALDLCPADTNKILTGGADKNVVVFD-KSSEQILATLKGHTKKVTSVVFHP 283
Query: 95 SGG-IFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHH 149
S +F + IW + + H VT L L + G L+S+S D +
Sbjct: 284 SQELVFSASPDATIRIWSV-PNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQY 338
Score = 62 (26.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 19/81 (23%), Positives = 34/81 (41%)
Query: 139 KRLISASLDHHAKIYEMTLKTVSSFT--GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCL 196
K + LD++ ++ + ++ GG DV I+ ++LH FT H T +
Sbjct: 434 KNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILH-FTEHSGLTTGVAF 492
Query: 197 ASGGKRLISASLDHHAKIYEM 217
K + S +D K Y +
Sbjct: 493 GHHAKFIASTGMDRSLKFYSL 513
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 89 (36.4 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 29/96 (30%), Positives = 42/96 (43%)
Query: 59 ISGSYDKTVNVYDT-RSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGG 116
+SG +DKT ++ T + V H V+ V P+ TG V +W + G
Sbjct: 377 VSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGN 436
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152
+ FT H +T+L + GK L SA D H I
Sbjct: 437 AV-RMFTGHTGNITALACSRDGKTLASA--DDHGSI 469
Score = 66 (28.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 158 KTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKT-VTSLCLASGGKRLISASLDHHAKIYE 216
KT++S + +WD LG G+LL + H K + SL + L+S D ++++
Sbjct: 458 KTLASADDHGSILLWD-LGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWD 516
Query: 217 MVNFSPVH 224
++ P H
Sbjct: 517 VMG--PAH 522
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 239 239 0.00092 113 3 11 22 0.41 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 236
No. of states in DFA: 584 (62 KB)
Total size of DFA: 180 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.29u 0.08s 21.37t Elapsed: 00:00:10
Total cpu time: 21.34u 0.08s 21.42t Elapsed: 00:00:11
Start: Thu Aug 15 12:56:37 2013 End: Thu Aug 15 12:56:48 2013
WARNINGS ISSUED: 1