RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11036
(239 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 70.9 bits (172), Expect = 4e-15
Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGG--GLDVCIWDM 112
+ +SG+ D + ++D R + H S + ++ P+G F TG
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172
+ + +TS+ + G+ L++ D + +W
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-------------------CNVW 297
Query: 173 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
D H V+ L + G + + S D KI+
Sbjct: 298 D-ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 64.0 bits (154), Expect = 1e-12
Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
LWD+ TFT H + A P + + +GS D T +
Sbjct: 208 AKLWDVREGMCRQTFTGHE--------------SDINAICFFP-NGNAFATGSDDATCRL 252
Query: 70 YDTRSPDPVMSVNHGSPVESVLCL---PSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCH 125
+D R+ +M+ +H + + + + SG + + G + +WD H
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAGH 311
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIY 153
V+ L + G + + S D KI+
Sbjct: 312 DNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 36.6 bits (83), Expect = 0.002
Identities = 30/221 (13%), Positives = 65/221 (29%), Gaps = 29/221 (13%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS-PVESVLCLPSGGIFV 100
+ A S +++S S D + ++D+ + + V ++ S V + PSG
Sbjct: 55 LAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 101 ------------------------TGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLAS 136
G + + T + +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 137 GGKRLISASLDHHAKIYEMTLKTVSSFTGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSL 194
G + + T +G D +WD + G FT H + ++
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD-VREGMCRQTFTGHESDINAI 232
Query: 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSI 235
C G + S D +++++ + T + + + I
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Score = 35.5 bits (80), Expect = 0.004
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS-PVLSIDV 237
+ H + ++ + + L+SAS D I++ + VH + S V++
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 238 SM 239
+
Sbjct: 106 AP 107
Score = 33.6 bits (75), Expect = 0.016
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 15/62 (24%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+WD + H + V V+ V +GS+D + +
Sbjct: 294 CNVWDALKADRAGVLAGHD--------------NRVSCLGVTD-DGMAVATGSWDSFLKI 338
Query: 70 YD 71
++
Sbjct: 339 WN 340
Score = 33.2 bits (74), Expect = 0.024
Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 26/182 (14%)
Query: 83 HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLI 142
H + + ++ + V+ I +H V + A G +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 143 SASLDHHAKIYEMTLKTVSSFTGGLDV-------------------------CIWDMLGG 177
LD+ IY + + + C +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL-DYPSPVLSID 236
G+ FT H V SL LA + +S + D AK++++ T + S + +I
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 237 VS 238
Sbjct: 234 FF 235
Score = 28.2 bits (61), Expect = 1.0
Identities = 7/39 (17%), Positives = 16/39 (41%)
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ H + ++ + + L+SAS D I++
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDS 84
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 65.1 bits (157), Expect = 5e-13
Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 8/152 (5%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-----SSDIVISGSYD 64
V +W + ++ + H + + + + T S ++SGS D
Sbjct: 167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 226
Query: 65 KTVNVYDTRSPDPVMS-VNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKF 122
KT+ ++D + +M+ V H + V VL G ++ + +WD + +
Sbjct: 227 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD-YKNKRCMKTL 285
Query: 123 TCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
H VTSL +++ S+D K++E
Sbjct: 286 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 62.5 bits (150), Expect = 3e-12
Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 6/189 (3%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDM 112
+ D ++S S DKT+ +++ ++ V + H V V G + + +
Sbjct: 112 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLD--VC 170
+ + + H V + A + +G D +
Sbjct: 172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL-LSGSRDKTIK 230
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YP 229
+WD+ G L H V + SGGK ++S + D ++++ N + TL+ +
Sbjct: 231 MWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 289
Query: 230 SPVLSIDVS 238
V S+D
Sbjct: 290 HFVTSLDFH 298
Score = 62.5 bits (150), Expect = 4e-12
Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 41/184 (22%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPV---------------------MSVNHGSPVESVLC 92
++ S S D+TV V+ + + S++ + E+
Sbjct: 154 DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 213
Query: 93 LPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152
G ++G + G L H V + SGGK ++S + D
Sbjct: 214 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT--- 270
Query: 153 YEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
+ +WD + + H VTSL +++ S+D
Sbjct: 271 ----------------LRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 213 KIYE 216
K++E
Sbjct: 314 KVWE 317
Score = 47.8 bits (112), Expect = 3e-07
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 22/187 (11%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFV 100
+ V P +++S S D T+ V+D + D ++ H V+ + SG +
Sbjct: 17 RSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 101 TGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTV 160
+ G + + H V+S+ + G ++SAS D K++
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW------- 128
Query: 161 SSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNF 220
+ G + FT H + V + G + S S D +++ +
Sbjct: 129 -------------EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 175
Query: 221 SPVHTLD 227
L
Sbjct: 176 ECKAELR 182
Score = 37.4 bits (85), Expect = 0.001
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
+ + H VT + ++SAS D K+++ TL
Sbjct: 7 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 56
Score = 35.9 bits (81), Expect = 0.003
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLD------ 168
+ + H VT + ++SAS D K+++ T + G D
Sbjct: 7 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS 66
Query: 169 ---------------VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAK 213
G + + H V+S+ + G ++SAS D K
Sbjct: 67 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 126
Query: 214 IYEMVNFSPVHTL 226
++E+ V T
Sbjct: 127 MWEVQTGYCVKTF 139
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 57.5 bits (137), Expect = 2e-10
Identities = 37/194 (19%), Positives = 59/194 (30%), Gaps = 46/194 (23%)
Query: 50 VSPVSSDIVISGSYDKTVNVYDTRS--------PDPVMSVNHGSPVESVLCLPSGGIFVT 101
VSP + +GS D+ V V+D+ + + H V SV+ G V+
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 271
Query: 102 GGGLDVCIWDMLGGGKL------------LHKFTCHHKTVTSLCLASGGKRLISASLDHH 149
G L + H V S+ + ++S S D
Sbjct: 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 331
Query: 150 AKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASG------GKRL 203
V WD G L H +V S+ +A+G
Sbjct: 332 -------------------VLFWD-KKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 371
Query: 204 ISASLDHHAKIYEM 217
+ S D A+I++
Sbjct: 372 ATGSGDCKARIWKY 385
Score = 53.6 bits (127), Expect = 4e-09
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 61 GSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGG--- 115
GS D+TV ++D R+ ++++ V +V P G ++ G LD V +WD G
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 116 ---GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172
T H +V S+ G+ ++S SLD K++ + +
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW--------NLQNANNKSDS 292
Query: 173 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSP 231
G + H V S+ + ++S S D ++ + +P+ L + +
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS 352
Query: 232 VLSIDVS 238
V+S+ V+
Sbjct: 353 VISVAVA 359
Score = 35.5 bits (80), Expect = 0.004
Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 6/130 (4%)
Query: 98 IFVTGGGLDVCIWDMLGGGKL---LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
+++ ++ LHK H V + ++ G+ L +
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRV 90
Query: 155 MTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 214
V+ + + + S+C + GK L + + D +I
Sbjct: 91 SDGSLVARLSDD---SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRI 147
Query: 215 YEMVNFSPVH 224
+++ N V
Sbjct: 148 WDIENRKIVM 157
Score = 32.5 bits (72), Expect = 0.039
Identities = 28/220 (12%), Positives = 54/220 (24%), Gaps = 44/220 (20%)
Query: 59 ISGSYDKTVNVYDTRSPDP-----VMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113
+ + +Y+ P S++H S V V G TG ++ +
Sbjct: 32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVS 91
Query: 114 GGGKL-----------------LHKFTCHHKTVTSLCLASGGKRLISAS----------- 145
G + + S+C + GK L + +
Sbjct: 92 DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 151
Query: 146 -----------LDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSL 194
+ G L G+ + T
Sbjct: 152 NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 211
Query: 195 CLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLS 234
GK + + SLD ++++ V LD + +
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Score = 30.2 bits (66), Expect = 0.24
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 11/65 (16%)
Query: 10 VALWDIPSEAQVSTFTNHT-TIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVN 68
V WD S + H ++ V ++ P ++ +GS D
Sbjct: 332 VLFWDKKSGNPLLMLQGHRNSVISV---------AVANGSSLGP-EYNVFATGSGDCKAR 381
Query: 69 VYDTR 73
++ +
Sbjct: 382 IWKYK 386
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 46.3 bits (108), Expect = 1e-06
Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 15/164 (9%)
Query: 52 PVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111
V+SGS D ++ V+D + + + ++ + S + L + V IWD
Sbjct: 184 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWD 243
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
+ G L + CL +I++S D K++++ TG +
Sbjct: 244 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK-------TGEFIRNL 296
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 215
+ GG V + ++ S + +
Sbjct: 297 VTLESGG--------SGGVVWRIRASNTKLVCAVGSRNGTEETK 332
Score = 38.6 bits (88), Expect = 4e-04
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPS 230
W G K H V + CL G R++S S D+ K++ V + TL +
Sbjct: 1 WR-RGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 231 PVLSIDVS 238
V S +
Sbjct: 59 GVWSSQMR 66
Score = 36.3 bits (82), Expect = 0.002
Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 27/202 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDM 112
+ ++SGS D T+ V+ + + ++ H V S + I + +
Sbjct: 26 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGS----TDRTLKV 81
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172
T + T T C+ KR++S S D +++++ G +
Sbjct: 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141
Query: 173 DM--------------------LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHA 212
+ LH H T L G ++S SLD
Sbjct: 142 CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVSGSLDTSI 199
Query: 213 KIYEMVNFSPVHTLDYPSPVLS 234
+++++ + +HTL + S
Sbjct: 200 RVWDVETGNCIHTLTGHQSLTS 221
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 46.0 bits (107), Expect = 1e-06
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 10/111 (9%)
Query: 52 PVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111
+V+SGS D T+ ++D + + + + + I + +WD
Sbjct: 185 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 244
Query: 112 MLGG--------GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 154
++ L H V L +++S+S D I++
Sbjct: 245 LVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIWD 293
Score = 41.8 bits (96), Expect = 3e-05
Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 20/159 (12%)
Query: 60 SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGK 117
S S D+T+ V++T + + V ++N + CL V G D + +WD+ G
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYRDRLVVSGSSDNTIRLWDIECGAC 210
Query: 118 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGG 177
L KR++S + D K++++ G
Sbjct: 211 LRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPR-----------APAG 256
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYE 216
L H V L +++S+S D I++
Sbjct: 257 TLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIWD 293
Score = 36.7 bits (83), Expect = 0.002
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 177 GGKLLHKFTCHHKTVTS-LCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
G L + C +T CL ++++S D+ KI++ L
Sbjct: 1 GRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL 51
Score = 30.6 bits (67), Expect = 0.14
Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 24/175 (13%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDM 112
++SG D T+ ++D + + + H V + +TG
Sbjct: 24 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWD 81
Query: 113 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW 172
+ G++L+ H + + + + +W
Sbjct: 82 VNTGEMLNTLIHHC---------------------EAVLHLRFNNGMMVTCSKDRSIAVW 120
Query: 173 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
DM + + + K ++SAS D K++ V TL+
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 175
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 45.2 bits (105), Expect = 3e-06
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 22/159 (13%)
Query: 60 SGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLL 119
+G D TV +D R + + S + S+ P+G G +
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK- 258
Query: 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK 179
++ H V SL A GK +S D+ + W G
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNL-------------------LNAWRTPYGAS 299
Query: 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218
+ + +V S ++ K +++ S D A +YE++
Sbjct: 300 IFQ--SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
Score = 44.8 bits (104), Expect = 4e-06
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWD 111
+S D +N + T + S V S VTG G D +++
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG-DKKATVYE 334
Query: 112 ML 113
++
Sbjct: 335 VI 336
Score = 43.3 bits (100), Expect = 1e-05
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGG-- 115
+ D + R + ++NHG V +V TGG V +WD+
Sbjct: 25 PVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGN 84
Query: 116 --GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 155
+ S L G LI I+++
Sbjct: 85 KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126
Score = 39.4 bits (90), Expect = 2e-04
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVS 238
++ H V SL A GK +S D+ + + + S VLS D+S
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS 315
Score = 25.5 bits (54), Expect = 6.8
Identities = 4/68 (5%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 177 GGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL------DYPS 230
+ ++ H + V ++ +++ + + + K++++ + + + +
Sbjct: 41 HARQINTLN-HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDN 98
Query: 231 PVLSIDVS 238
+ S +
Sbjct: 99 YIRSCKLL 106
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 45.2 bits (105), Expect = 3e-06
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 83 HGSPVESVLCL---PSGGIFVTGGG-LDVCIWDMLGGG-KLLHKFTCHHKTVTSLCLASG 137
H VE + C +V I++ G +H+ H+ VT + A
Sbjct: 3 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD 62
Query: 138 GKRLISASLDHHAKIYEM 155
R+++ D +A ++ +
Sbjct: 63 SNRIVTCGTDRNAYVWTL 80
Score = 43.3 bits (100), Expect = 1e-05
Identities = 14/106 (13%), Positives = 34/106 (32%), Gaps = 22/106 (20%)
Query: 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGG- 178
H F + ++ ++ +H V I++ G
Sbjct: 3 HSF--LVEPISCHAWNKDRTQIAICPNNHE-------------------VHIYEKSGNKW 41
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
+H+ H+ VT + A R+++ D +A ++ + +
Sbjct: 42 VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87
Score = 34.1 bits (76), Expect = 0.012
Identities = 22/216 (10%), Positives = 50/216 (23%), Gaps = 30/216 (13%)
Query: 10 VALWDIPSEA----QVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDK 65
++ + T + + S+ +V S S +
Sbjct: 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 224
Query: 66 TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCH 125
+ + P+ +V + + G ++ L F
Sbjct: 225 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKL-SFGGR 283
Query: 126 HKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFT 185
R +LD A +
Sbjct: 284 LDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL-------------------- 323
Query: 186 CHHKTVTSLCLASGGK----RLISASLDHHAKIYEM 217
H +V+ + + SGGK + + +D I+++
Sbjct: 324 -HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Score = 33.7 bits (75), Expect = 0.017
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 38 YSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN---HGSPVESVLCLP 94
+S + + + + + V++Y+ V H V V P
Sbjct: 3 HSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61
Query: 95 SGGIFVTGGG-LDVCIWDM 112
VT G + +W +
Sbjct: 62 DSNRIVTCGTDRNAYVWTL 80
Score = 31.8 bits (70), Expect = 0.065
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 9/118 (7%)
Query: 55 SDIVISGSYDKT-VNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDML 113
S +V +G + YD+ + P +S +
Sbjct: 255 SSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 314
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGK----RLISASLDHHAKIYEMTLKTVSSFTGGL 167
G L + H +V+ + + SGGK + + +D I++ ++++ S L
Sbjct: 315 AAGAGLD--SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD--VRSLESALKDL 368
Score = 29.1 bits (63), Expect = 0.45
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVN--FSPVHTLD-YPSPVLSIDVS 238
H F + ++ ++ +H IYE + VH L + V +D +
Sbjct: 3 HSF--LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60
Score = 28.3 bits (61), Expect = 0.96
Identities = 32/230 (13%), Positives = 63/230 (27%), Gaps = 26/230 (11%)
Query: 10 VALWDIPSE--AQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTV 67
V +++ QV H V +P S+ +++ D+
Sbjct: 31 VHIYEKSGNKWVQVHELKEHN--------------GQVTGVDWAP-DSNRIVTCGTDRNA 75
Query: 68 NVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVC-------IWDMLGGGKLLH 120
V+ + ++ + C+ H
Sbjct: 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 135
Query: 121 KFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKL 180
TV SL L + S D +I+ +K V + G+L
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA--PTPWGSKMPFGEL 193
Query: 181 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS 230
+ + + V +C ++ G R+ S D + + V TL +
Sbjct: 194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 44.1 bits (102), Expect = 8e-06
Identities = 21/201 (10%), Positives = 59/201 (29%), Gaps = 32/201 (15%)
Query: 53 VSSDIVISGSYDKTVNVYDTRSPDPV-------------MSVNHGSPVESVLCLPSGGIF 99
+ +S S D + V+D + D ++H ++++
Sbjct: 22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81
Query: 100 VTGGGLD--VCIWDMLGGGKL---------LHKFTCHHKTVTSLCLASGG-----KRLIS 143
V + + + + L + +L + RL++
Sbjct: 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA 141
Query: 144 ASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203
+ I++ + + L + L + + TS+ ++ G +
Sbjct: 142 TDVKGTTYIWK--FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL-I 198
Query: 204 ISASLDHHAKIYEMVNFSPVH 224
+ + +I E+ P++
Sbjct: 199 ATGFNNGTVQISELSTLRPLY 219
Score = 37.5 bits (85), Expect = 0.001
Identities = 19/157 (12%), Positives = 47/157 (29%), Gaps = 22/157 (14%)
Query: 2 SHDLPILIVALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISG 61
+ L++ ++ + + T + L + +V + + + +
Sbjct: 250 HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF-AHSSWVMSLSFNDSGETLCS-A 307
Query: 62 SYDKTVNVYDTRSPDPVMSVN-HGSPVE----SVLCLPSGGIFVTGGGLDVCIWDMLGGG 116
+D + +D ++ + + ++N H +E + G G DV
Sbjct: 308 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK----- 362
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
K S A + L LD + +
Sbjct: 363 ----------KGWRSGMGADLNESLCCVCLDRSIRWF 389
Score = 32.5 bits (72), Expect = 0.034
Identities = 14/105 (13%), Positives = 27/105 (25%), Gaps = 15/105 (14%)
Query: 125 HHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDVCIWDMLGGGKLLHK 183
H + S+ +S S D + K+++ L + + HK
Sbjct: 13 HDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV----------HK 60
Query: 184 FTCHHKTVTSLCLASG--GKRLISASLDHHAKIYEMVNFSPVHTL 226
HH V + + S Y + +
Sbjct: 61 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 105
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 42.9 bits (99), Expect = 2e-05
Identities = 13/96 (13%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 35 LMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV----NHGSPVESV 90
+ + P+DY+ + P S +++ S+D ++ VY + + + P+
Sbjct: 4 VQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 91 LCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHH 126
+ + + + G + I + G + ++
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98
Score = 38.3 bits (87), Expect = 5e-04
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 179 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM----VNFSPVHTLDYPSPVLS 234
+++ ++ + + L+ S D +Y+ N + +L Y P+L
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 235 IDVS 238
+
Sbjct: 62 CNFI 65
Score = 34.8 bits (78), Expect = 0.007
Identities = 6/109 (5%), Positives = 30/109 (27%), Gaps = 18/109 (16%)
Query: 117 KLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLG 176
+++ ++ + + L+ S D +Y+ +D+
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYK-----------------FDIQA 44
Query: 177 GGKLLHKFTCHHKTVTSLC-LASGGKRLISASLDHHAKIYEMVNFSPVH 224
L + + + + + ++ ++ +++
Sbjct: 45 KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ 93
Score = 32.5 bits (72), Expect = 0.032
Identities = 12/113 (10%), Positives = 28/113 (24%), Gaps = 1/113 (0%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
VA+ + + L L T Y + + D ++
Sbjct: 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISC 277
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHK 121
++ ++ + + + V S I D + L+
Sbjct: 278 WNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNA 330
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 41.4 bits (95), Expect = 5e-05
Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 5/180 (2%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVN-HGSPVESVLCLPSGGIFVTGGGLDVCIWDM 112
+ VI+G+ DK + VYD+ + ++ ++ H V ++ GGI V+G
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWAL-KYAHGGILVSGSTDRTVRVWD 80
Query: 113 LGGGKLLHKFTCHHKT--VTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDV 169
+ G H F H+ T + K +++ S D+ ++++ +V D
Sbjct: 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140
Query: 170 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYP 229
+ + ++ G ++S S D+ ++++ ++ L
Sbjct: 141 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200
Score = 36.8 bits (83), Expect = 0.001
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 59 ISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKL 118
+S + D ++ +D S +H + S I V+G I+++ G +
Sbjct: 257 VSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLV 316
Query: 119 LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKI 152
+ S+ G + + D + +
Sbjct: 317 HANILKDADQIWSVNF-KGKTLVAAVEKDGQSFL 349
Score = 34.9 bits (78), Expect = 0.007
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 22/105 (20%)
Query: 120 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGK 179
H +V + CL +I+ + D + ++D K
Sbjct: 6 TTLRGHMTSVIT-CLQFEDNYVITGADDKM-------------------IRVYD-SINKK 44
Query: 180 LLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
L + + H V +L A GG L+S S D +++++ H
Sbjct: 45 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH 88
Score = 33.7 bits (75), Expect = 0.015
Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 83 HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 141
H + V + L +TG + ++D K L + + H V +L A GG L
Sbjct: 11 HMTSVITCLQ-FEDNYVITGADDKMIRVYD-SINKKFLLQLSGHDGGVWALKYAHGG-IL 67
Query: 142 ISASLDHHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGK 201
+S S D +++++ + G + + + K+ +L + K
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 202 RLISASLDHHAKIYEMVNFSPVH 224
+ + +
Sbjct: 128 ESSVPDHGEEHDYPLVFHTPEEN 150
Score = 33.7 bits (75), Expect = 0.015
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD-YPSPVLSIDVS 238
H +V + CL +I+ + D ++Y+ +N + L + V ++ +
Sbjct: 6 TTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62
Score = 31.4 bits (69), Expect = 0.075
Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 21/118 (17%)
Query: 104 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSF 163
KF+ HH ++++ ++ + ++
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQ-------------- 304
Query: 164 TGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFS 221
I+++ G + + S+ G + + D + + E+++FS
Sbjct: 305 -----FNIYNLRSGKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFL-EILDFS 355
Score = 31.0 bits (68), Expect = 0.10
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Query: 22 STFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSV 81
+ + +S + A T VS +I++SGS + N+Y+ RS V +
Sbjct: 261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 319
Query: 82 --NHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111
+ SV + +
Sbjct: 320 ILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351
Score = 26.0 bits (55), Expect = 4.5
Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 18/218 (8%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ ++D ++ + + H V A + + S V
Sbjct: 35 IRVYDSINKKFLLQLSGHD--------------GGVWALKYAHGGILVSGSTDRTVRVWD 80
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHK 127
V ++ + + ++ G D + +W L + H
Sbjct: 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK-LPKESSVPDHGEEHD 139
Query: 128 TVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCIW-DMLGGGKLLHKFTC 186
+ H A + ++ +G D + + K L+ +
Sbjct: 140 YPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG 199
Query: 187 HHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
H + S KR ISAS+D +I+++ N ++
Sbjct: 200 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 41.0 bits (94), Expect = 7e-05
Identities = 16/180 (8%), Positives = 36/180 (20%), Gaps = 25/180 (13%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSVN--------HGSPVESVLCLPSGGIFVTGGGLDV 107
+ SY D + V +P G
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGL 167
++ + + S +
Sbjct: 251 DMYKRS------SPINVDPGDYRMIIPLESSILIYSVPVHGE------FAAYYQGAPEKG 298
Query: 168 DVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLD 227
+ +D+ K T +T L L++ K ++ D + + T++
Sbjct: 299 VLLKYDVKTR-----KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 29.8 bits (65), Expect = 0.28
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 9/98 (9%)
Query: 39 STPQDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGI 98
S P + SP+ D++ S + + D V+ V + V +
Sbjct: 1 SIPSKFAED--FSPLDGDLIAFVSRGQ-AFIQDVSG-TYVLKVPEPLRIRYVRRGGDTKV 56
Query: 99 FVTGG---GLDVCIWDMLGGGKLLHKFTCHHKTVTSLC 133
G G + I+D G KF + V ++
Sbjct: 57 AFIHGTREGDFLGIYDYRTG--KAEKFEENLGNVFAMG 92
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 39.1 bits (89), Expect = 3e-04
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 94 PSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
P+G G V +G +T H T + G S + + +I+
Sbjct: 27 PAGDKIQYCNGTSVYTVP-VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIW 85
Query: 154 EMT 156
+ T
Sbjct: 86 DTT 88
Score = 35.6 bits (80), Expect = 0.004
Identities = 8/62 (12%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVES--VLCLPSGGIFVTGGG-LDVCIW 110
+ S S DKT+ +++ + ++ G+ +E + + + V+ +
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Query: 111 DM 112
+
Sbjct: 309 NP 310
Score = 33.7 bits (75), Expect = 0.014
Identities = 13/93 (13%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Query: 65 KTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD-VCIWDMLGGGKLLHKFT 123
D + +V H V + P G + + IW+ + K+
Sbjct: 219 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN-VATLKVEKTIP 277
Query: 124 CHHK-TVTSLCLASGGKRLISASLDHHAKIYEM 155
+ L + + L+S S +
Sbjct: 278 VGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 33.3 bits (74), Expect = 0.018
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 163 FTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
+ G V +G +T H T + G S + + +I++ +
Sbjct: 34 YCNGTSVYTVP-VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92
Query: 223 VHTLDYP 229
+ P
Sbjct: 93 ILKTTIP 99
Score = 32.6 bits (72), Expect = 0.030
Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHK-TVTSLCLASGGKRLISASLDHHAKIYEM 217
+ D + IW+ + K+ + L + + L+S S +
Sbjct: 255 SASADKTIKIWN-VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 30.3 bits (66), Expect = 0.21
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 182 HKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSIDVSM 239
K H +V L + G ++ SAS D KI+ + T+ + + + +
Sbjct: 232 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 289
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 38.0 bits (86), Expect = 6e-04
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMV 218
TG LD + I+ + K++ H V +L + L+S+ D K + +V
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNVV 287
Score = 36.5 bits (82), Expect = 0.002
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 89 SVLCLPSGGIFVTGGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASL 146
V G LD + I+ + K++ H V +L + L+S+
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGA 277
Query: 147 DHHAKIY 153
D K +
Sbjct: 278 DACIKRW 284
Score = 34.9 bits (78), Expect = 0.006
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSV--NHGSPVESVLCLPSGGIFVTGGGLDVCIWD 111
D+V +GS D + +Y + P ++ H V ++L + +G + W+
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285
Query: 112 ML 113
++
Sbjct: 286 VV 287
Score = 30.3 bits (66), Expect = 0.17
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 176 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPSPVLSI 235
G ++L + H+K +T+L + LIS S D + + H+ + ++S+
Sbjct: 1 GHDEVLKTISGHNKGITALTVN----PLISGSYDGRIMEWSSSSMHQDHS----NLIVSL 52
Query: 236 DVS 238
D S
Sbjct: 53 DNS 55
Score = 28.4 bits (61), Expect = 0.79
Identities = 20/179 (11%), Positives = 48/179 (26%), Gaps = 6/179 (3%)
Query: 48 GTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDV 107
++ ++ + +ISGSYD + + + S M +H + + S+ + +
Sbjct: 14 KGITALTVNPLISGSYDGRIMEWSSSS----MHQDHSNLIVSLDNSKAQEYSSISWDDTL 69
Query: 108 CIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKT--VSSFTG 165
+ + + + L+ I + L + +
Sbjct: 70 KVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS 129
Query: 166 GLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
V + G + K + + IS S V +
Sbjct: 130 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILL 188
Score = 28.0 bits (60), Expect = 0.93
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 114 GGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
G ++L + H+K +T+L + LIS S D + +
Sbjct: 1 GHDEVLKTISGHNKGITALTVN----PLISGSYDGRIMEWSSS 39
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 37.3 bits (84), Expect = 0.001
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 178 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTL 226
G + H+K +T+L ++ GK L SA + H +++
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF 50
Score = 36.9 bits (83), Expect = 0.001
Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Query: 42 QDYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVN--HGSPVESVLCLPSGGIF 99
+ A + S + S + +N +D + H + + + G +F
Sbjct: 12 NKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70
Query: 100 VTGGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA 135
+ + G G K + + L LA
Sbjct: 71 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Score = 36.5 bits (82), Expect = 0.002
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 1/110 (0%)
Query: 116 GKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM-TLKTVSSFTGGLDVCIWDM 174
G + H+K +T+L ++ GK L SA + H +++ T + F I +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 175 LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
K + + G A + + + S
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADG 111
Score = 31.5 bits (69), Expect = 0.077
Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 107 VCIWDM-LGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMT 156
V +W+M + H + + + ++SA D + K + +
Sbjct: 248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 31.1 bits (68), Expect = 0.092
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 59 ISGSYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGGIFVTGGG-LDVCIWD 111
+GS D +V V++ P + H + + + V+ G ++ W+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 31.1 bits (68), Expect = 0.093
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 148 HHAKIYEMTLKTVSSFTGGLD--VCIWDM-LGGGKLLHKFTCHHKTVTSLCLASGGKRLI 204
+ V TG LD V +W+M + H + + + ++
Sbjct: 225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIV 284
Query: 205 SASLDHHAKIY 215
SA D + K +
Sbjct: 285 SAGQDSNIKFW 295
Score = 29.6 bits (64), Expect = 0.35
Identities = 7/52 (13%), Positives = 15/52 (28%), Gaps = 1/52 (1%)
Query: 83 HGSPVESVLCLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLC 133
H + ++ G + + WD+ G H +T +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 36.8 bits (83), Expect = 0.002
Identities = 19/137 (13%), Positives = 40/137 (29%), Gaps = 2/137 (1%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGGGLD-VCIWD 111
S+ I+ S ++V D S ++ GS + P G ++V + V I D
Sbjct: 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIID 60
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
+ ++ + + + + I + + G
Sbjct: 61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120
Query: 172 WDMLGGGKLLHKFTCHH 188
+ GK L+
Sbjct: 121 LALSPDGKKLYVTNNGD 137
Score = 29.8 bits (65), Expect = 0.27
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGS 85
V+P + ++ S+ TV+V DT + ++ G
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGK 286
Score = 27.1 bits (58), Expect = 1.8
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 15/146 (10%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+++ D+ S +T +SP + + ++ ++ V++
Sbjct: 14 ISVIDVTSNKVTATIPVG---------------SNPMGAVISPDGTKVYVANAHSNDVSI 58
Query: 70 YDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKFTCHHKTV 129
DT + + + +V GS + V P G + + + K+
Sbjct: 59 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118
Query: 130 TSLCLASGGKRLISASLDHHAKIYEM 155
L L+ GK+L +
Sbjct: 119 LGLALSPDGKKLYVTNNGDKTVSVIN 144
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 35.9 bits (81), Expect = 0.003
Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 10/167 (5%)
Query: 56 DIVISGSYDKTVNVYDTRSPDPVMSV---NHGSPVESVLCLPSGG-IFVTGGGLD-VCIW 110
D +++ + + V DT + + G + P G + T + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 111 DMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVC 170
D L G+ L + L +S A ++ F
Sbjct: 62 D-LVTGETLGRIDLSTPEERVKSLFG---AALSPDGKTLAIYESPVRLELTHFEVQPTRV 117
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
F + +T L A G +L D H E
Sbjct: 118 ALYDAETLSRRKAF-EAPRQITMLAWARDGSKLYGLGRDLHVMDPEA 163
Score = 30.9 bits (68), Expect = 0.10
Identities = 17/249 (6%), Positives = 43/249 (17%), Gaps = 32/249 (12%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ + D A T V+P + + +++
Sbjct: 13 LVVIDTEKMAVDKVITIADAG------------PTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 70 YDTRSPDPVMSVNHGSP------------------VESVLCLPSGGIFVTGGGLDVCIWD 111
D + + + ++ +P + +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 112 MLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDV-C 170
F + +T L A G +L D H E +
Sbjct: 121 DAETLSRRKAF-EAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET 179
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVHTLDYPS 230
+ + ++
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239
Query: 231 PVLSIDVSM 239
V ++
Sbjct: 240 DVFYFSTAV 248
Score = 30.2 bits (66), Expect = 0.20
Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 58 VISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGGGLDVCIWDM 112
+ + +D + V SV G +++ G D+ +D
Sbjct: 253 TRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 35.3 bits (79), Expect = 0.005
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 55 SDIVISGSYDKTVNVYDTRSPDPVMSVN---HGSPVESVLCLPSGGIFVTGGGLD--VCI 109
S + D T+ V+D + V + V + +G + LD +
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Query: 110 WDM 112
+++
Sbjct: 323 YEL 325
Score = 33.7 bits (75), Expect = 0.016
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 164 TGGLD--VCIWDMLGGGKLLHKFTCHHKTVTSLCLA---SGGKRLISASLDHHAKIYEM 217
T G D + +WD + K + K+T + + + + +G R+IS SLD YE+
Sbjct: 268 TVGADATIRVWD-VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 33.4 bits (74), Expect = 0.017
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 92 CLPSGGIFVTGGG-LDVCIWDMLGGGKLLHKFTCHHKTVTSLCLA---SGGKRLISASLD 147
F T G + +WD + K + K+T + + + + +G R+IS SLD
Sbjct: 259 SWLDSQKFATVGADATIRVWD-VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 148 HHAKIYEM 155
YE+
Sbjct: 318 GTLNFYEL 325
Score = 31.4 bits (69), Expect = 0.085
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 12/62 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ +WD+ + V +T Q + V + +IS S D T+N
Sbjct: 275 IRVWDVTTSKCVQKWTLDK------------QQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Query: 70 YD 71
Y+
Sbjct: 323 YE 324
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 33.2 bits (75), Expect = 0.025
Identities = 23/178 (12%), Positives = 42/178 (23%), Gaps = 25/178 (14%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGGGLDVCIWDMLGG 115
++ + + D + + ++ G V SG +FV G V + D+
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93
Query: 116 GKLLHKFTC----HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFTGGLDVCI 171
TS K I+ + I
Sbjct: 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP------------------QYVI 135
Query: 172 WDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL-ISASLDHHAKIYEMVNFSPVHTLDY 228
D + + T + I AS I + + +DY
Sbjct: 136 MDGE-TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 192
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 32.6 bits (73), Expect = 0.038
Identities = 22/174 (12%), Positives = 44/174 (25%), Gaps = 8/174 (4%)
Query: 57 IVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGGGLDVCIWDMLGG 115
++ + + D S V ++ G V SG + V G + + D+
Sbjct: 34 FSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK 93
Query: 116 GKLLHK----FTCHHKTVTSLCLASGGKRLISASLDHHAKIY---EMTLKTVSSFTGGLD 168
+S + I+ + E T G+
Sbjct: 94 EPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 153
Query: 169 VCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSP 222
V ++ H + + GK L+ D + +P
Sbjct: 154 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP 207
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 32.0 bits (71), Expect = 0.059
Identities = 19/195 (9%), Positives = 46/195 (23%), Gaps = 18/195 (9%)
Query: 54 SSDIVISGSYDKTVNVYDTRSPDPV--MSVNHGSPVESVLCLPSGG-IFVTGGGLD-VCI 109
+ +I +Y ++V D S + + + P +V +
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 110 WDMLGGGKLLHKFTC-----HHKTVTSLCLASGGKRLISASLDHHAKIYEMTLKTVSSFT 164
D+ H +++ S ++ GK + +
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH-------YVV 119
Query: 165 GGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIYEMVNFSPVH 224
+ ++ G + T L A+ L A ++
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTV 177
Query: 225 TLDYPSPVLSIDVSM 239
L + +
Sbjct: 178 ALPLRNWNRKGYSAP 192
Score = 31.6 bits (70), Expect = 0.066
Identities = 19/239 (7%), Positives = 47/239 (19%), Gaps = 36/239 (15%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPVSSDIVISGSYDKTVNV 69
+ + D+ S+ + + ++P + + ++ +
Sbjct: 20 LHVVDVASDTVYKSCVMPD-------------KFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 70 YDTRSPDPVMSVN-------HGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGG----KL 118
D + N G + S P G + D ++
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 126
Query: 119 LHKFTCHHKTVTSLCLASGGKRLISASLD--------HHAKIYEMTLKTVSSFTGGLDVC 170
L+ A+ D K+ T K +
Sbjct: 127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNR 186
Query: 171 IWDMLGGGKLLHKFTCHHKTVTSL----CLASGGKRLISASLDHHAKIYEMVNFSPVHT 225
+ L + +A L + ++
Sbjct: 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ 245
Score = 30.5 bits (67), Expect = 0.18
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 49 TVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG-IFVTGGGLDV 107
T D + YD + + + N V G +++ G D+
Sbjct: 256 TGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDL 315
Query: 108 CIWD 111
+++
Sbjct: 316 AVFN 319
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 28.0 bits (61), Expect = 0.99
Identities = 7/109 (6%), Positives = 27/109 (24%), Gaps = 7/109 (6%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV----SSDIVISGSYDK 65
+ + + K + Q + + + +
Sbjct: 235 QGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAE 294
Query: 66 TVNVYDTRSPDPVMSVNHGSPVESVLCLPSGG--IFVTGGGLD-VCIWD 111
+ +++G ++++ G + G + + I+D
Sbjct: 295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 27.3 bits (59), Expect = 1.8
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 160 VSSFTGGLDVCIWDMLGGGKLLHKFTC--HHKTVTSLCLASGGKRLISASLDHHAKIYEM 217
++ ++ I+ G+L+ H + L G ++ AS D+ IY
Sbjct: 215 IADNHNNFNLTIFT--QDGQLISALESKVKHAQCFDVALMDDG-SVVLASKDYRLYIYRY 271
Query: 218 VNFSPV 223
V +PV
Sbjct: 272 VQLAPV 277
>d2psba1 c.153.1.1 (A:13-308) Uncharacterized protein YerB {Bacillus
subtilis [TaxId: 1423]}
Length = 296
Score = 27.3 bits (60), Expect = 1.9
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 54 SSDIV----ISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGG 104
+DIV G + + ++ ++ P+ V V L IFV G
Sbjct: 39 KADIVIEALAEGQITRFLAIFQSQMPETVGPVRSAREYFVTLSNGFDSIFVHHGW 93
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 26.7 bits (57), Expect = 3.1
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 17/89 (19%)
Query: 10 VALWDIPSEAQVSTFTNHTTIYKVPLMLYSTPQDYVRAGTVSPV-SSDIVISGSYDKTVN 68
V + D + +++ F I + VS + + DKT+
Sbjct: 282 VVVLDAKTGERLAKFEMGHEIDSI---------------NVSQDEKPLLYALSTGDKTLY 326
Query: 69 VYDTRSPDPVMSV-NHGSPVESVLCLPSG 96
++D S + + SV G + + G
Sbjct: 327 IHDAESGEELRSVNQLGHGPQVITTADMG 355
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 26.5 bits (57), Expect = 3.1
Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 148 HHAKIYEMTLKTVSSFTGGLDVCIWDMLGGGKLLHKFTCHHKTVTSLCLASGGKRL 203
E V+++ + ++ GG+ + C + ++L K +
Sbjct: 229 DGMDFDEDNNLLVANWGSS-HIEVFG-PDGGQPKMRIRCPFEKPSNLHFKPQTKTI 282
Score = 25.4 bits (54), Expect = 6.9
Identities = 7/79 (8%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Query: 63 YDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLDVCIWDMLGGGKLLHKF 122
+ + + + + G + + G + ++ GG+ +
Sbjct: 205 IKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG-PDGGQPKMRI 263
Query: 123 TCHHKTVTSLCLASGGKRL 141
C + ++L K +
Sbjct: 264 RCPFEKPSNLHFKPQTKTI 282
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 26.0 bits (57), Expect = 5.3
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 43 DYVRAGTVSPVSSDIVISGSYDKTVNVYDTRSPDPVMSVNHGSPVESVLCLPSGGIFVTG 102
SP + +G TV+V D + + ++++ P G+
Sbjct: 258 KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFE-DKIELRDTIVAEPELGLGPLH 316
Query: 103 GGLD 106
D
Sbjct: 317 TTFD 320
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal
domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Length = 275
Score = 25.2 bits (55), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 145 SLDHHAKIYEMTLKTVSSFTGGLD 168
LD AK+++ +KT+S G D
Sbjct: 225 ELDKAAKVWKFPIKTLSQSEAGWD 248
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 25.2 bits (53), Expect = 8.8
Identities = 10/104 (9%), Positives = 32/104 (30%), Gaps = 7/104 (6%)
Query: 57 IVISGSYDKTVNVYD---TRSPDPVMSVNHGSPVESVLCLPSGGIFVTGGGLD--VCIWD 111
+ I+ + ++V++ + V+ V+ ++ P G + V +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 112 MLGGGKL--LHKFTCHHKTVTSLCLASGGKRLISASLDHHAKIY 153
+ + ++T + G+ + S +
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.267 0.0549 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 901,036
Number of extensions: 40309
Number of successful extensions: 244
Number of sequences better than 10.0: 1
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 114
Length of query: 239
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 156
Effective length of database: 1,268,006
Effective search space: 197808936
Effective search space used: 197808936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.8 bits)