Query psy11037
Match_columns 129
No_of_seqs 109 out of 1127
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 16:30:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5a_A Synaptotagmin-7; calciu 99.9 2E-23 7E-28 130.5 12.9 101 29-129 1-101 (138)
2 1w15_A Synaptotagmin IV; metal 99.9 3E-23 1E-27 132.1 13.2 104 26-129 12-115 (153)
3 1tjx_A Similar to synaptotagmi 99.9 5.4E-23 1.8E-27 131.7 13.8 104 26-129 7-110 (159)
4 2z0u_A WW domain-containing pr 99.9 1.4E-24 4.6E-29 138.9 6.1 104 26-129 25-129 (155)
5 3fdw_A Synaptotagmin-like prot 99.9 2.1E-23 7.2E-28 132.2 10.7 103 27-129 6-109 (148)
6 2cm5_A Rabphilin-3A; protein t 99.9 1.1E-22 3.9E-27 131.1 12.4 104 26-129 19-122 (166)
7 1wfm_A Synaptotagmin XIII; C2 99.9 5.4E-22 1.9E-26 124.4 15.0 99 27-129 9-107 (138)
8 1ugk_A Synaptotagmin IV, KIAA1 99.9 2.1E-22 7.2E-27 126.2 12.3 102 26-129 4-107 (138)
9 2dmg_A KIAA1228 protein; beta- 99.9 8.6E-23 2.9E-27 128.5 9.7 100 26-126 6-105 (142)
10 2bwq_A Regulating synaptic mem 99.9 1.3E-22 4.4E-27 125.7 10.1 100 29-128 3-105 (129)
11 3f04_A Synaptotagmin-1; C2A, c 99.9 7E-23 2.4E-27 129.0 8.4 104 24-129 14-117 (143)
12 1v27_A Regulating synaptic mem 99.9 1E-22 3.6E-27 127.8 8.8 103 27-129 4-109 (141)
13 1rsy_A Synaptotagmin I; calciu 99.9 1.8E-22 6.2E-27 128.4 9.9 103 25-129 23-125 (152)
14 2chd_A Rabphilin-3A, exophilin 99.9 8.6E-23 2.9E-27 128.5 8.0 104 26-129 11-115 (142)
15 3fbk_A RGS3, RGP3, regulator o 99.9 2.4E-22 8.1E-27 128.1 9.1 102 26-129 9-111 (153)
16 2d8k_A Synaptotagmin VII; exoc 99.9 5.3E-22 1.8E-26 124.8 10.6 101 27-129 9-110 (141)
17 2enp_A B/K protein; C2 type 1, 99.9 3.4E-22 1.2E-26 126.4 9.6 102 26-129 8-116 (147)
18 3rdl_A Protein kinase C alpha 99.9 1.2E-21 4.2E-26 122.3 11.1 99 28-129 2-100 (137)
19 1a25_A CALB, protein kinase C 99.9 3.4E-21 1.2E-25 122.1 11.3 101 26-129 15-115 (149)
20 2q3x_A Regulating synaptic mem 99.9 5.5E-21 1.9E-25 123.8 10.8 101 24-129 12-114 (171)
21 2r83_A Synaptotagmin-1; C2A-C2 99.8 1E-19 3.4E-24 126.0 16.6 116 14-129 118-235 (284)
22 2r83_A Synaptotagmin-1; C2A-C2 99.8 2.3E-20 7.8E-25 129.2 11.6 101 27-129 2-102 (284)
23 1dqv_A Synaptotagmin III; beta 99.8 7E-21 2.4E-25 132.8 9.1 101 27-129 3-103 (296)
24 1rh8_A Piccolo protein; beta-s 99.8 1E-21 3.5E-26 123.5 3.3 101 27-129 3-113 (142)
25 2b3r_A Phosphatidylinositol-4- 99.8 1E-20 3.5E-25 118.1 7.8 94 35-129 11-105 (134)
26 1dqv_A Synaptotagmin III; beta 99.8 2.3E-20 8E-25 130.1 5.6 104 26-129 134-237 (296)
27 2ep6_A MCTP2 protein; beta san 99.7 6.7E-18 2.3E-22 104.9 6.7 85 37-129 6-90 (133)
28 2dmh_A Myoferlin; beta-sandwic 99.7 5.7E-17 1.9E-21 101.4 10.7 82 42-129 5-87 (140)
29 3b7y_A E3 ubiquitin-protein li 99.7 6.9E-17 2.4E-21 102.5 10.6 86 41-129 17-103 (153)
30 3pyc_A E3 ubiquitin-protein li 99.7 8.4E-17 2.9E-21 99.8 9.1 76 44-126 5-80 (132)
31 3m7f_B E3 ubiquitin-protein li 99.7 1.4E-16 4.9E-21 103.4 10.3 86 41-129 5-91 (176)
32 2fk9_A Protein kinase C, ETA t 99.7 1.1E-16 3.7E-21 102.2 7.8 80 42-129 27-116 (157)
33 3kwu_A MUNC13-1; calcium bindi 99.7 4.4E-16 1.5E-20 98.3 9.3 74 43-124 16-89 (148)
34 1wfj_A Putative elicitor-respo 99.7 2.3E-16 7.9E-21 98.2 7.8 80 42-129 8-88 (136)
35 1gmi_A Protein kinase C, epsil 99.7 1.3E-16 4.4E-21 99.5 5.7 79 43-129 5-94 (136)
36 2nq3_A Itchy homolog E3 ubiqui 99.7 8.8E-16 3E-20 99.5 9.8 79 42-129 34-112 (173)
37 1rlw_A Phospholipase A2, CALB 99.7 1.2E-16 4E-21 98.3 5.4 81 43-128 2-85 (126)
38 3pfq_A PKC-B, PKC-beta, protei 99.6 4.2E-15 1.4E-19 113.6 12.6 99 28-129 158-256 (674)
39 3nsj_A Perforin-1; pore formin 99.5 1.9E-14 6.3E-19 107.4 8.8 79 44-129 394-472 (540)
40 3jzy_A Intersectin 2; C2 domai 99.5 3.6E-14 1.2E-18 105.1 10.2 81 42-129 385-465 (510)
41 1djx_A PLC-D1, phosphoinositid 99.5 2.9E-14 1E-18 108.0 9.1 86 42-129 495-583 (624)
42 2cjt_A UNC-13 homolog A, MUNC1 99.5 4.8E-14 1.6E-18 87.4 6.2 73 43-129 4-77 (131)
43 2cjs_A UNC-13 homolog A, MUNC1 99.4 2.1E-13 7E-18 87.9 6.8 73 43-129 13-86 (167)
44 1cjy_A CPLA2, protein (cytosol 99.4 9.5E-14 3.2E-18 106.7 4.8 83 42-129 16-101 (749)
45 3l9b_A Otoferlin; C2-domain, b 99.4 1.4E-12 4.9E-17 81.1 7.2 77 43-129 20-97 (144)
46 3qr0_A Phospholipase C-beta (P 99.1 2.2E-10 7.6E-15 88.9 8.6 73 44-122 650-727 (816)
47 3ohm_B 1-phosphatidylinositol- 99.1 2.9E-10 9.8E-15 88.9 7.7 73 44-122 725-801 (885)
48 2zkm_X 1-phosphatidylinositol- 99.1 4.1E-10 1.4E-14 87.5 8.3 74 43-122 677-755 (799)
49 3bxj_A RAS GTPase-activating p 99.0 3E-11 1E-15 89.3 -1.2 74 44-129 11-91 (483)
50 1yrk_A NPKC-delta, protein kin 98.0 0.00027 9.1E-09 42.8 11.3 73 44-121 6-79 (126)
51 2enj_A NPKC-theta, protein kin 97.8 0.00055 1.9E-08 42.0 10.1 73 44-121 10-84 (138)
52 3l4c_A Dedicator of cytokinesi 91.8 0.67 2.3E-05 30.7 6.4 43 81-123 77-119 (220)
53 2wxf_A Phosphatidylinositol-4, 91.6 1.3 4.6E-05 35.5 8.9 78 42-122 215-294 (940)
54 1e7u_A Phosphatidylinositol 3- 90.6 1.9 6.4E-05 34.8 8.9 79 43-122 217-296 (961)
55 3hhm_A Phosphatidylinositol-4, 86.6 3.2 0.00011 33.9 7.8 79 43-123 354-434 (1091)
56 2y3a_A Phosphatidylinositol-4, 85.5 1.1 3.9E-05 36.4 4.8 77 43-122 352-430 (1092)
57 2rrl_A FLIK, flagellar HOOK-le 27.4 88 0.003 19.7 3.8 29 22-52 90-118 (169)
No 1
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.91 E-value=2e-23 Score=130.53 Aligned_cols=101 Identities=50% Similarity=0.943 Sum_probs=91.9
Q ss_pred cceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCC
Q psy11037 29 GRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADN 108 (129)
Q Consensus 29 ~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~ 108 (129)
++|+|.+++.|.+..+.|.|.|++|++|...+..+.+||||++++.+.+....+.+|+++++++||.|||+|.|.+....
T Consensus 1 s~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 1 SRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred CCcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 47999999999999999999999999999999888999999999988776667889999999999999999999998877
Q ss_pred CCccEEEEEEEEcCCCCCCCC
Q psy11037 109 LDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 109 ~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+....|.|+|||+|.+++++|
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~ 101 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDV 101 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEE
T ss_pred cCceEEEEEEEECCCCCCCcE
Confidence 766689999999999888764
No 2
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.91 E-value=3e-23 Score=132.10 Aligned_cols=104 Identities=56% Similarity=0.921 Sum_probs=86.2
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
.....|+|.+++.|.+..+.|.|.|++|++|...+..+.+||||++++.+++....+++|+++++++||.|||+|.|.+.
T Consensus 12 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 91 (153)
T 1w15_A 12 IPSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIP 91 (153)
T ss_dssp ----CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECC
T ss_pred CCccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECC
Confidence 34567999999999999999999999999999998888999999999988776666889999999999999999999998
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
..++....|.|+|||+|.+++++|
T Consensus 92 ~~~l~~~~l~v~V~d~d~~~~~~~ 115 (153)
T 1w15_A 92 CESLEEISVEFLVLDSERGSRNEV 115 (153)
T ss_dssp SSSSTTEEEEEEEEECCTTSCCEE
T ss_pred HHHhCceEEEEEEEeCCCCCCCcE
Confidence 877766689999999999888764
No 3
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.91 E-value=5.4e-23 Score=131.73 Aligned_cols=104 Identities=50% Similarity=0.840 Sum_probs=93.2
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
+...+|+|.+++.|.+..+.|.|.|++|++|...+..+.+||||++++.+.+....+.+|+++++++||.|+|+|.|.+.
T Consensus 7 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 86 (159)
T 1tjx_A 7 ILEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVP 86 (159)
T ss_dssp GGGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECC
T ss_pred CcCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcC
Confidence 34568999999999999999999999999999999889999999999988766667889999999999999999999998
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
.+++....|.|+|||+|.+++++|
T Consensus 87 ~~~l~~~~l~i~V~d~d~~~~~~~ 110 (159)
T 1tjx_A 87 FEQIQKVQVVVTVLDYDKIGKNDA 110 (159)
T ss_dssp GGGGGGCEEEEEEEECCSSSCCEE
T ss_pred HHHhCCcEEEEEEEECCCCCCCce
Confidence 776666689999999999887764
No 4
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=138.87 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=89.3
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCC-eEeeEEeeeeccCCCCCccCcEEEEEe
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG-QRVAKKKTHVKKRTLNPVYNESFVFEV 104 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~-~~~~~~~T~~~~~~~~P~~~e~~~f~i 104 (129)
.....|+|++++.|.+..+.|.|.|++|++|..++..+.+||||++++.+.. ....+++|+++++++||.|||+|.|.+
T Consensus 25 ~~~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v 104 (155)
T 2z0u_A 25 EAVGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSM 104 (155)
T ss_dssp ---CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEEC
T ss_pred CcCCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEc
Confidence 4456799999999999999999999999999999989999999999997632 223478999999999999999999998
Q ss_pred cCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 105 PADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 105 ~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
...++....|.|+|||+|.++++||
T Consensus 105 ~~~~l~~~~L~~~V~d~d~~~~~d~ 129 (155)
T 2z0u_A 105 SYPALHQKTLRVDVCTTDRSHLEEC 129 (155)
T ss_dssp CHHHHHHCEEEEEEEEECTTSCEEE
T ss_pred CHHHhCcCEEEEEEEECCCCCCCcE
Confidence 8766655689999999999988764
No 5
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.90 E-value=2.1e-23 Score=132.22 Aligned_cols=103 Identities=29% Similarity=0.495 Sum_probs=91.5
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCC-CCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMD-VTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~-~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
.+.+|+|.++++|.+..+.|.|.|++|++|...+ ..+.+||||++++.+.+....+.+|+++++++||.|||+|.|.+.
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 4567999999999999999999999999999887 578899999999987654456889999999999999999999998
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
..++....|.|+|||+|.+++++|
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~ 109 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTF 109 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEE
T ss_pred hhHhCceEEEEEEEECCCCcCCcE
Confidence 887766789999999999887764
No 6
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.90 E-value=1.1e-22 Score=131.09 Aligned_cols=104 Identities=33% Similarity=0.595 Sum_probs=90.7
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
....+|+|.+++.|.+..+.|.|.|++|++|...+..+.+||||++++.+......+.+|+++++++||.|||+|.|.+.
T Consensus 19 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 98 (166)
T 2cm5_A 19 DIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIK 98 (166)
T ss_dssp -CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECC
T ss_pred CcCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcc
Confidence 45678999999999999999999999999999999889999999999976544456889999999999999999999998
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
.+++....|.|+|||++.+++++|
T Consensus 99 ~~~l~~~~L~i~V~d~d~~~~~~~ 122 (166)
T 2cm5_A 99 HSDLAKKSLDISVWDYDIGKSNDY 122 (166)
T ss_dssp GGGGGGCEEEEEEEECCSSSCCEE
T ss_pred hHhcCCCEEEEEEEECCCCCCCcE
Confidence 776666789999999999888764
No 7
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.89 E-value=5.4e-22 Score=124.44 Aligned_cols=99 Identities=20% Similarity=0.297 Sum_probs=86.8
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecC
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 106 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~ 106 (129)
....|+|++++.|....+.|.|.|++|++ ++..+.+||||++++.+... ..+.+|+++++++||.|||+|.|.+..
T Consensus 9 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~-~~~~kT~v~~~tlnP~wnE~f~f~v~~ 84 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTG-SVEAQTALKKRQLHTTWEEGLVLPLAE 84 (138)
T ss_dssp CSSCCEEEEEEEEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTE-EEEEECCCCCCCSSEECSSCEEEECCT
T ss_pred CCcceEEEEEEEEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCC-cccEecccCcCCCCCcCCceEEEEecH
Confidence 44679999999999999999999999993 56678899999999987533 356789999999999999999999988
Q ss_pred CCCCccEEEEEEEEcCCCCCCCC
Q psy11037 107 DNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 107 ~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
.++....|.|+|||+|.++++||
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~ 107 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSV 107 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSC
T ss_pred HHcCCCEEEEEEEECCCCCCCcE
Confidence 87776789999999999988875
No 8
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.89 E-value=2.1e-22 Score=126.18 Aligned_cols=102 Identities=31% Similarity=0.621 Sum_probs=89.8
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCC-CCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEE-
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVT-GLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE- 103 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~-~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~- 103 (129)
.....|+|.++++|.+..+.|.|.|++|++|+.++.. +.+||||++++.+.+. .+.+|+++++++||.|||+|.|.
T Consensus 4 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~ 81 (138)
T 1ugk_A 4 GSSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK--HKVKTRVLRKTLDPAFDETFTFYG 81 (138)
T ss_dssp CCCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC--SEEECCCCSSCSSCEEEEEEEEEC
T ss_pred CCCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC--ceEecCcCcCCCCCcEeeEEEEcC
Confidence 4456799999999999999999999999999999875 8899999999976443 57899999999999999999996
Q ss_pred ecCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 104 VPADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 104 i~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+..+++....|.|+|||+|.+++++|
T Consensus 82 v~~~~~~~~~l~i~V~d~d~~~~~~~ 107 (138)
T 1ugk_A 82 IPYTQIQELALHFTILSFDRFSRDDI 107 (138)
T ss_dssp CCSTTGGGCEEEEEEEEECSSCCCCC
T ss_pred cCHHHhccCEEEEEEEECCCCCCCcE
Confidence 77776666689999999999988875
No 9
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=8.6e-23 Score=128.47 Aligned_cols=100 Identities=33% Similarity=0.570 Sum_probs=87.4
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
+...+|+|+++++|.+..+.|.|.|++|++|..++..+ +||||++++.+.+....+++|+++++++||.|||+|.|.+.
T Consensus 6 ~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 84 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVS 84 (142)
T ss_dssp CSCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCC
T ss_pred CCCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEec
Confidence 44567999999999999999999999999999999888 99999999987554446789999999999999999999987
Q ss_pred CCCCCccEEEEEEEEcCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTK 126 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~ 126 (129)
..++....|.|+|||++.+++
T Consensus 85 ~~~l~~~~L~i~V~d~d~~~~ 105 (142)
T 2dmg_A 85 LPEVQRRTLDVAVKNSGGFLS 105 (142)
T ss_dssp HHHHHHCEEEEEEEECCCSSC
T ss_pred HHHhCcCEEEEEEEECCCccc
Confidence 655555589999999998764
No 10
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.89 E-value=1.3e-22 Score=125.67 Aligned_cols=100 Identities=27% Similarity=0.516 Sum_probs=83.7
Q ss_pred cceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEe-cCC
Q psy11037 29 GRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEV-PAD 107 (129)
Q Consensus 29 ~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i-~~~ 107 (129)
..|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+++....+.+|+++++++||.|||+|.|.+ ...
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 4699999999999999999999999999999988999999999998765455788999999999999999999994 444
Q ss_pred CCCccEEEEEEEEcCCCCC--CC
Q psy11037 108 NLDSVSLELLLLDWDRVTK--NE 128 (129)
Q Consensus 108 ~~~~~~l~i~v~d~~~~~~--~d 128 (129)
++....|.|+|||++..++ ++
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~ 105 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESE 105 (129)
T ss_dssp GGGGCEEEEEEEEC-------CE
T ss_pred HhcCCeEEEEEEECCcCcCcCCc
Confidence 5555689999999998876 54
No 11
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.88 E-value=7e-23 Score=129.01 Aligned_cols=104 Identities=36% Similarity=0.642 Sum_probs=91.1
Q ss_pred ccccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEE
Q psy11037 24 EIKSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE 103 (129)
Q Consensus 24 ~~~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~ 103 (129)
.......|+|.++++|.+..+.|.|.|++|++|...+..+.+||||++++.+.+. .+.+|+++++++||.|+|+|.|.
T Consensus 14 ~~~~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~ 91 (143)
T 3f04_A 14 DSMVEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFK 91 (143)
T ss_dssp HHSCCCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS--CCEECCCCCSCSSCEEEEEEEEC
T ss_pred hccccCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC--ccEECccCcCCCCCcCcCeEEEe
Confidence 3455678999999999999999999999999999998888999999999976543 47889999999999999999999
Q ss_pred ecCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 104 VPADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 104 i~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+...++....|.|+|||++.+++++|
T Consensus 92 v~~~~l~~~~L~i~V~d~d~~~~~~~ 117 (143)
T 3f04_A 92 VPYSELGGKTLVMAVYDFDRFSKHDI 117 (143)
T ss_dssp CCHHHHTTCEEEEEEEECCSSSCCEE
T ss_pred ecHhhcCCCEEEEEEEeCCCCCCCce
Confidence 87766555689999999999888764
No 12
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.88 E-value=1e-22 Score=127.77 Aligned_cols=103 Identities=27% Similarity=0.525 Sum_probs=89.2
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEE-ec
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-VP 105 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~-i~ 105 (129)
...+|+|.+++.|.+..+.|.|.|++|++|..++..+.+||||++++.+......+.+|+++++++||.|||+|.|. +.
T Consensus 4 ~~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 45689999999999999999999999999999998899999999998765434567899999999999999999999 45
Q ss_pred CCCCCccEEEEEEEEcCCCCC--CCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTK--NEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~--~d~ 129 (129)
..++....|.|+|||++..++ ++|
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~ 109 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEF 109 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCC
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCce
Confidence 555555689999999999876 654
No 13
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.88 E-value=1.8e-22 Score=128.43 Aligned_cols=103 Identities=36% Similarity=0.650 Sum_probs=88.3
Q ss_pred cccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEe
Q psy11037 25 IKSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEV 104 (129)
Q Consensus 25 ~~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i 104 (129)
.+....|+|++++.|.+..+.|.|.|++|++|...+..+.+||||++++.+.+. .+.+|+++++++||.|||+|.|.+
T Consensus 23 ~~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~v 100 (152)
T 1rsy_A 23 KEEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKV 100 (152)
T ss_dssp ---CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC--SCEECCCCTTCSSCEEEEEEEECC
T ss_pred CCCCCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC--ceEeccccCCCCCCcCcccEEEee
Confidence 345668999999999999999999999999999999889999999999976543 567899999999999999999998
Q ss_pred cCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 105 PADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 105 ~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
..+++....|.|+|||++.+++++|
T Consensus 101 ~~~~l~~~~L~i~V~d~d~~~~~~~ 125 (152)
T 1rsy_A 101 PYSELGGKTLVMAVYDFDRFSKHDI 125 (152)
T ss_dssp CHHHHTTCEEEEEEEECCSSSCCEE
T ss_pred cHHHcCCCEEEEEEEECCCCCCCcE
Confidence 7665545689999999999887764
No 14
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.88 E-value=8.6e-23 Score=128.48 Aligned_cols=104 Identities=29% Similarity=0.516 Sum_probs=88.1
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEE-e
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-V 104 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~-i 104 (129)
....+|+|.+++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+......+.+|+++++++||.|+|+|.|. +
T Consensus 11 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~ 90 (142)
T 2chd_A 11 QATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGI 90 (142)
T ss_dssp ---CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESC
T ss_pred CCCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEccc
Confidence 446689999999999999999999999999999998889999999999865444568899999999999999999998 6
Q ss_pred cCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 105 PADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 105 ~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
...++....|.|+|||++.+++++|
T Consensus 91 ~~~~~~~~~l~i~V~d~d~~~~d~~ 115 (142)
T 2chd_A 91 TEEDMQRKTLRISVCDEDKFGHNEF 115 (142)
T ss_dssp CHHHHHHCEEEEEEEEECTTSCEEE
T ss_pred CHHHccCCEEEEEEEECCCCCCCcE
Confidence 5544434579999999999887753
No 15
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.88 E-value=2.4e-22 Score=128.07 Aligned_cols=102 Identities=20% Similarity=0.360 Sum_probs=86.4
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
+....|++.+++.|.+..+.|.|.|++|++|...+ .+.+||||++++.+......+.+|+++++++||.|||+|.|.+.
T Consensus 9 ~~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 87 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQ 87 (153)
T ss_dssp ----CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECC
T ss_pred ccCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecc
Confidence 44567999999999999999999999999999998 68899999999987654556789999999999999999999987
Q ss_pred CCCCCccEEEEEEEEcCCCCC-CCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTK-NEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~-~d~ 129 (129)
..++.. .|.|+|||++.+++ ++|
T Consensus 88 ~~~~~~-~L~i~V~d~d~~~~~d~~ 111 (153)
T 3fbk_A 88 EEDDQK-RLLVTVWNRASQSRQSGL 111 (153)
T ss_dssp GGGTTS-EEEEEEEECCSSGGGCEE
T ss_pred cHHhCC-EEEEEEEeCCCCCCCCcE
Confidence 666543 59999999999876 653
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=5.3e-22 Score=124.76 Aligned_cols=101 Identities=37% Similarity=0.661 Sum_probs=86.3
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEe-c
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEV-P 105 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i-~ 105 (129)
.+.+|+|++++.|.+..+.|.|.|++|++|+..+..+.+||||++++.+... .+.+|+++++++||.|||+|.|.+ .
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~~~ 86 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK--HKLETKVKRKNLNPHWNETFLFEGFP 86 (141)
T ss_dssp CCCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS--SEEECCCCTTCSSCCCCEEEEECSCC
T ss_pred CceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC--ccEeCceEcCCCCCccccEEEECccC
Confidence 3457999999999999999999999999999999889999999999976433 467899999999999999999985 3
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
.+++....|.|+|||++.+++++|
T Consensus 87 ~~~~~~~~l~i~V~d~d~~~~~~~ 110 (141)
T 2d8k_A 87 YEKVVQRILYLQVLDYDRFSRNDP 110 (141)
T ss_dssp HHHHTTSEEEEEEEECCSSSSCEE
T ss_pred HHHcccCEEEEEEEECCCCCCCcE
Confidence 333334579999999999887764
No 17
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=3.4e-22 Score=126.44 Aligned_cols=102 Identities=29% Similarity=0.501 Sum_probs=86.7
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCC-CC------CCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCc
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKM-DV------TGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNE 98 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~-~~------~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e 98 (129)
.....|+|+++++|.+..+.|.|.|++|++|+.. +. .+.+||||++++.+... .+.+|+++++++||.|||
T Consensus 8 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne 85 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK--NSKQTGVKRKTQKPVFEE 85 (147)
T ss_dssp SCCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS--SCEECCCCCSCSSCCCCB
T ss_pred CCCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC--cceEeecccCCCCCeEee
Confidence 4567899999999999999999999999999884 33 35799999999976433 467899999999999999
Q ss_pred EEEEEecCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 99 SFVFEVPADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 99 ~~~f~i~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+|.|.+...++....|.|+|||++.+++++|
T Consensus 86 ~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~ 116 (147)
T 2enp_A 86 RYTFEIPFLEAQRRTLLLTVVDFDKFSRHCV 116 (147)
T ss_dssp CCEECCCHHHHHHSEEEEEEECCSTTCCSCC
T ss_pred eEEEEeChHHhccCEEEEEEEECCCCcCCcE
Confidence 9999987655555579999999999888875
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.87 E-value=1.2e-21 Score=122.31 Aligned_cols=99 Identities=38% Similarity=0.631 Sum_probs=86.4
Q ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCC
Q psy11037 28 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPAD 107 (129)
Q Consensus 28 ~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~ 107 (129)
+.+|+|.++++| ..+.|.|.|++|++|+..+..+.+||||++++.+.+....+.+|++++++.||.|+|+|.|.+...
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 467999999999 679999999999999999988999999999997665455678999999999999999999998765
Q ss_pred CCCccEEEEEEEEcCCCCCCCC
Q psy11037 108 NLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 108 ~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+.. ..|.|+|||++..++++|
T Consensus 80 ~~~-~~l~i~v~d~d~~~~~~~ 100 (137)
T 3rdl_A 80 DKD-RRLSVEIWDWDRTTRNDF 100 (137)
T ss_dssp GGG-CEEEEEEEECCSSSCCEE
T ss_pred hcC-CEEEEEEEECCCCCCCce
Confidence 443 479999999999888764
No 19
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=3.4e-21 Score=122.11 Aligned_cols=101 Identities=35% Similarity=0.568 Sum_probs=85.6
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
....+|+|.++++| ..+.|.|.|++|++|...+..+.+||||++++.+.+....+.+|+++++++||.|+|+|.|.+.
T Consensus 15 ~~~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (149)
T 1a25_A 15 SMERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLK 92 (149)
T ss_dssp --CTTCEEEEEEEE--SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECC
T ss_pred CCCcceEEEEEEEe--cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEec
Confidence 44567999999999 4688999999999999999889999999999986544456789999999999999999999987
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
..+.. ..|.|+|||+|.+++++|
T Consensus 93 ~~~~~-~~L~i~V~d~d~~~~~~~ 115 (149)
T 1a25_A 93 ESDKD-RRLSVEIWDWDLTSRNDF 115 (149)
T ss_dssp SGGGG-CEEEEEEEECCSSSCCEE
T ss_pred cccCC-CEEEEEEEECCCCCCCCE
Confidence 65443 479999999999887764
No 20
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.85 E-value=5.5e-21 Score=123.84 Aligned_cols=101 Identities=30% Similarity=0.555 Sum_probs=83.7
Q ss_pred ccccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCC-CCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEE
Q psy11037 24 EIKSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDV-TGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVF 102 (129)
Q Consensus 24 ~~~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~-~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f 102 (129)
..+....|+|+++++| ..+.|.|.|++|++|..++. .+.+||||++++.+.+....+.+|+++++++||.|||+|.|
T Consensus 12 ~~~~~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f 89 (171)
T 2q3x_A 12 TLATPAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVF 89 (171)
T ss_dssp -----CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEC
T ss_pred cCCCCCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEE
Confidence 4455678999999999 67999999999999999985 68899999999988776667889999999999999999999
Q ss_pred EecCCCCCccEEEEEEE-EcCCCCCCCC
Q psy11037 103 EVPADNLDSVSLELLLL-DWDRVTKNEA 129 (129)
Q Consensus 103 ~i~~~~~~~~~l~i~v~-d~~~~~~~d~ 129 (129)
.+... ...|.|+|| |+|.+++++|
T Consensus 90 ~v~~~---~~~L~~~V~~d~d~~~~d~~ 114 (171)
T 2q3x_A 90 DESPQ---GKVLQVIVWGDYGRMDHKCF 114 (171)
T ss_dssp SSCCT---TEEEEEEEEEECSTTCSSEE
T ss_pred EecCC---CCEEEEEEEEcCCCCCCCCE
Confidence 98643 257999999 9999888764
No 21
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1e-19 Score=126.00 Aligned_cols=116 Identities=47% Similarity=0.775 Sum_probs=98.6
Q ss_pred ceEEeeeccccc--ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCC
Q psy11037 14 SFHNSTDISSEI--KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRT 91 (129)
Q Consensus 14 ~~~~~~~~~~~~--~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~ 91 (129)
....|..+.... .....|+|.+++.|.+..+.|.|.+++|++|..++..+.+||||++++.+.+....+.+|++++++
T Consensus 118 ~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 197 (284)
T 2r83_A 118 VTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNT 197 (284)
T ss_dssp CEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred cceeEEEeeccccccccccccEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCC
Confidence 334555553211 234679999999999999999999999999999998899999999999887766678899999999
Q ss_pred CCCccCcEEEEEecCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 92 LNPVYNESFVFEVPADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 92 ~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+||.|||+|.|.+..+++....|.|+|||+|.+++++|
T Consensus 198 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~ 235 (284)
T 2r83_A 198 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDA 235 (284)
T ss_dssp SSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCE
T ss_pred CCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcE
Confidence 99999999999998887776789999999999988874
No 22
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.84 E-value=2.3e-20 Score=129.24 Aligned_cols=101 Identities=38% Similarity=0.671 Sum_probs=88.9
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecC
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 106 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~ 106 (129)
.+.+|+|++++.|.+..+.|.|.|++|++|..++..+.+||||++++.+... .+.+|+++++++||.|||+|.|.+..
T Consensus 2 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~--~~~~T~~~~~~~nP~wne~f~f~v~~ 79 (284)
T 2r83_A 2 SEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKVPY 79 (284)
T ss_dssp -CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT--SCEECCCCCSCSSCEEEEEEEECCCG
T ss_pred CcceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC--ceEeCCcccCCCCCeeCceEEEEech
Confidence 4568999999999999999999999999999999889999999999976432 36789999999999999999999887
Q ss_pred CCCCccEEEEEEEEcCCCCCCCC
Q psy11037 107 DNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 107 ~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+++....|.|+|||+|.+++++|
T Consensus 80 ~~~~~~~l~~~V~d~d~~~~~~~ 102 (284)
T 2r83_A 80 SELAGKTLVMAVYDFDRFSKHDI 102 (284)
T ss_dssp GGCTTCEEEEEEEECCSSSCCCE
T ss_pred HHhCcCEEEEEEEECCCCCCCce
Confidence 76666689999999999888764
No 23
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.84 E-value=7e-21 Score=132.78 Aligned_cols=101 Identities=35% Similarity=0.662 Sum_probs=89.7
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecC
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 106 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~ 106 (129)
...+|+|++++.|++..+.|.|.|++|++|+.++..+.+||||++++.+++. .+.+|+++++++||.|+|+|.|.+..
T Consensus 3 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~ 80 (296)
T 1dqv_A 3 GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK--KKFQTKVHRKTLNPIFNETFQFSVPL 80 (296)
T ss_dssp CCSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTT--SCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CCeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCC--eeEeCCccCCCCCCcEeeEEEEEecH
Confidence 4568999999999999999999999999999999899999999999876543 56789999999999999999999987
Q ss_pred CCCCccEEEEEEEEcCCCCCCCC
Q psy11037 107 DNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 107 ~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+++....|.|+|||+|.+++++|
T Consensus 81 ~~l~~~~L~~~V~d~d~~~~~~~ 103 (296)
T 1dqv_A 81 AELAQRKLHFSVYDFDRFSRHDL 103 (296)
T ss_dssp GGGSSCCCEEEEEECCSSSCCCE
T ss_pred HHhcCCEEEEEEEEcCCCCCCce
Confidence 76665679999999999988874
No 24
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=1e-21 Score=123.49 Aligned_cols=101 Identities=33% Similarity=0.575 Sum_probs=84.0
Q ss_pred cCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeE---------eeEEeeeeccCCCCCccC
Q psy11037 27 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQR---------VAKKKTHVKKRTLNPVYN 97 (129)
Q Consensus 27 ~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~---------~~~~~T~~~~~~~~P~~~ 97 (129)
...+|+|++++.|. .+.|.|.|++|++|+.++..+.+||||++++.+.... ..+.+|+++++++||.||
T Consensus 3 ~~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wn 80 (142)
T 1rh8_A 3 HPITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWN 80 (142)
T ss_dssp CCCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEE
T ss_pred CCcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCC
Confidence 45689999999998 6899999999999999998899999999998643211 135789999999999999
Q ss_pred cEEEEE-ecCCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 98 ESFVFE-VPADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 98 e~~~f~-i~~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
|+|.|. +..+++....|.|+|||+|.+++++|
T Consensus 81 e~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~ 113 (142)
T 1rh8_A 81 QTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDF 113 (142)
T ss_dssp EEEEECSCCHHHHTTCEEEEEEEEECSSSCEEE
T ss_pred CEEEECCcCHHHccCCEEEEEEEECCCCCCCce
Confidence 999997 66544444579999999999887764
No 25
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.83 E-value=1e-20 Score=118.09 Aligned_cols=94 Identities=27% Similarity=0.451 Sum_probs=78.4
Q ss_pred EEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEE-ecCCCCCccE
Q psy11037 35 LSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-VPADNLDSVS 113 (129)
Q Consensus 35 ~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~-i~~~~~~~~~ 113 (129)
+.+.|....+.|.|.|++|++|+. +..+.+||||++++.+++....+.+|+++++++||.|||+|.|. +...++....
T Consensus 11 ~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~ 89 (134)
T 2b3r_A 11 VKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRE 89 (134)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCE
T ss_pred EEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCE
Confidence 444455577999999999999997 66788999999999876544567899999999999999999999 7765545568
Q ss_pred EEEEEEEcCCCCCCCC
Q psy11037 114 LELLLLDWDRVTKNEA 129 (129)
Q Consensus 114 l~i~v~d~~~~~~~d~ 129 (129)
|.|+|||+|.+++++|
T Consensus 90 L~~~V~d~d~~~~~~~ 105 (134)
T 2b3r_A 90 LQLSVLSAESLRENFF 105 (134)
T ss_dssp EEEEEEECCSSSCCEE
T ss_pred EEEEEEECCCCCCCcE
Confidence 9999999999887764
No 26
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.81 E-value=2.3e-20 Score=130.14 Aligned_cols=104 Identities=43% Similarity=0.807 Sum_probs=91.1
Q ss_pred ccCcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEec
Q psy11037 26 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 105 (129)
Q Consensus 26 ~~~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~ 105 (129)
.....|+|.+++.|.+..+.|.|.|++|++|..++..+.+||||++++.+++....+++|+++++++||.|||+|.|.+.
T Consensus 134 ~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 213 (296)
T 1dqv_A 134 EKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVA 213 (296)
T ss_dssp CCSCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCC
T ss_pred cccccceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcC
Confidence 34567999999999999999999999999999999889999999999876554456788999999999999999999988
Q ss_pred CCCCCccEEEEEEEEcCCCCCCCC
Q psy11037 106 ADNLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 106 ~~~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
.+.+....|.|+|||+|.+++++|
T Consensus 214 ~~~l~~~~L~i~V~d~d~~~~~~~ 237 (296)
T 1dqv_A 214 PESVENVGLSIAVVDYDCIGHNEV 237 (296)
T ss_dssp SGGGGSCCCCCEEEECCSSSCCEE
T ss_pred HHHccCcEEEEEEEeCCCCCCCce
Confidence 776655579999999999988764
No 27
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=6.7e-18 Score=104.94 Aligned_cols=85 Identities=26% Similarity=0.332 Sum_probs=72.3
Q ss_pred EEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEE
Q psy11037 37 LCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLEL 116 (129)
Q Consensus 37 ~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i 116 (129)
+.|....+.|.|.|++|++|+..+..+.+||||++.+. . .+.+|+++++++||.|+|+|.|.+.... ..|.|
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~--~~~kT~~~~~t~nP~wne~f~f~~~~~~---~~l~i 77 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---N--DRLQTHTVYKNLNPEWNKVFTFPIKDIH---DVLEV 77 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---T--EEEECCCCSSCSSCCCCEEEEEEESCTT---CEEEE
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---C--EEEEeeeecCCCCCccccEEEEEecCCC---CEEEE
Confidence 44667789999999999999999988999999999983 2 3668999999999999999999997533 46999
Q ss_pred EEEEcCCCCCCCC
Q psy11037 117 LLLDWDRVTKNEA 129 (129)
Q Consensus 117 ~v~d~~~~~~~d~ 129 (129)
+|||+|..++++|
T Consensus 78 ~V~d~d~~~~~~~ 90 (133)
T 2ep6_A 78 TVFDEDGDKPPDF 90 (133)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEECCCCCCCCe
Confidence 9999998876653
No 28
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=5.7e-17 Score=101.44 Aligned_cols=82 Identities=33% Similarity=0.517 Sum_probs=70.5
Q ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCC-CccEEEEEEEE
Q psy11037 42 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNL-DSVSLELLLLD 120 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~-~~~~l~i~v~d 120 (129)
..+.|.|.|++|++|...+. +.+||||++++. . .+++|+++++++||.|||+|.|.+..+.+ ....|.|+|||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~--~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---D--EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---S--CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---C--EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 45789999999999999988 889999999983 2 36899999999999999999999976543 34579999999
Q ss_pred cCCCCCCCC
Q psy11037 121 WDRVTKNEA 129 (129)
Q Consensus 121 ~~~~~~~d~ 129 (129)
+|.+++++|
T Consensus 79 ~d~~~~~~~ 87 (140)
T 2dmh_A 79 FETIGQNKL 87 (140)
T ss_dssp TTCSSSCCC
T ss_pred CCCCCCCce
Confidence 999988875
No 29
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.72 E-value=6.9e-17 Score=102.49 Aligned_cols=86 Identities=28% Similarity=0.442 Sum_probs=66.7
Q ss_pred CCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCC-eEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEE
Q psy11037 41 PAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG-QRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLL 119 (129)
Q Consensus 41 ~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~-~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~ 119 (129)
...+.|.|.|++|++|...+..+.+||||++++.+.. ......+|+++++++||.|||+|.|.+.... ..|.|+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~---~~l~~~V~ 93 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQ---HRLLFEVF 93 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTT---CEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCC---CEEEEEEE
Confidence 3567899999999999999888899999999987543 2346789999999999999999999987643 46999999
Q ss_pred EcCCCCCCCC
Q psy11037 120 DWDRVTKNEA 129 (129)
Q Consensus 120 d~~~~~~~d~ 129 (129)
|++.+++++|
T Consensus 94 d~d~~~~d~~ 103 (153)
T 3b7y_A 94 DENRLTRDDF 103 (153)
T ss_dssp ECCSSSCCEE
T ss_pred ECCCCcCCCe
Confidence 9999888764
No 30
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.70 E-value=8.4e-17 Score=99.81 Aligned_cols=76 Identities=26% Similarity=0.401 Sum_probs=66.2
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEcCC
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDR 123 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~~~ 123 (129)
..|.|+|++|++|..++..+.+||||++++.+. ..+.+|+++.+++||.|+|+|.|.+.... .|.|+|||++.
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~----~l~~~v~d~d~ 77 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD----SITISVWNHKK 77 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC----CEEEEEEEGGG
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC----EEEEEEEECCC
Confidence 568999999999999998999999999998432 25788999999999999999999987643 49999999998
Q ss_pred CCC
Q psy11037 124 VTK 126 (129)
Q Consensus 124 ~~~ 126 (129)
+++
T Consensus 78 ~~~ 80 (132)
T 3pyc_A 78 IHK 80 (132)
T ss_dssp TTS
T ss_pred CCC
Confidence 876
No 31
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.70 E-value=1.4e-16 Score=103.35 Aligned_cols=86 Identities=27% Similarity=0.445 Sum_probs=66.9
Q ss_pred CCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeC-CeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEE
Q psy11037 41 PAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYK-GQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLL 119 (129)
Q Consensus 41 ~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~-~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~ 119 (129)
...+.|.|.|++|++|...+..+.+||||++++... .....+.+|+++++++||.|+|+|.|.+.... ..|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~---~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQR---HRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTT---CEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCC---CEEEEEEE
Confidence 356789999999999999998899999999998753 23346789999999999999999999997543 46999999
Q ss_pred EcCCCCCCCC
Q psy11037 120 DWDRVTKNEA 129 (129)
Q Consensus 120 d~~~~~~~d~ 129 (129)
|++.+++++|
T Consensus 82 d~d~~~~d~~ 91 (176)
T 3m7f_B 82 DENRLTRDDF 91 (176)
T ss_dssp ECC----CEE
T ss_pred ECCCCCCCcE
Confidence 9999887764
No 32
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=102.22 Aligned_cols=80 Identities=24% Similarity=0.289 Sum_probs=66.2
Q ss_pred CCCEEEEEEEEEeCCCCCCC----------CCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCc
Q psy11037 42 AANRFTIVVLKARNLPKMDV----------TGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDS 111 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~----------~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~ 111 (129)
..+.|.|.|++|++|..++. .+.+||||++.+ ++. ...+|+++.+++||.|||+|.|.+...
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l--~~~--~~~kT~v~~ktlnP~WNE~F~f~v~~~---- 98 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSV--DQV--RVGQTSTKQKTNKPTYNEEFCANVTDG---- 98 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEE--TTE--EEEECCCCSSCSSCEEEEEEEEEEEEE----
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEE--CCE--eeEEeeecCCCCCCccCcEEEEEcCCC----
Confidence 45789999999999998872 256899999998 222 346899999999999999999998642
Q ss_pred cEEEEEEEEcCCCCCCCC
Q psy11037 112 VSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 112 ~~l~i~v~d~~~~~~~d~ 129 (129)
..|.|+|||+|.+++|||
T Consensus 99 ~~L~~~V~D~d~~~~dd~ 116 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHF 116 (157)
T ss_dssp CEEEEEEEECCSSSSCEE
T ss_pred CEEEEEEEECCCCCCCCE
Confidence 379999999999988874
No 33
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.67 E-value=4.4e-16 Score=98.26 Aligned_cols=74 Identities=36% Similarity=0.565 Sum_probs=65.5
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEcC
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWD 122 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~~ 122 (129)
.+.|.|.|++|++|+..+..+.+||||++++ +. .+.+|+++.+++||.|+|+|.|.+.... ..|.|+|||+|
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~---~~--~~~kT~~~~~t~nP~Wne~f~f~v~~~~---~~l~~~v~d~d 87 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQV---GK--TKKRTKTIYGNLNPVWEENFHFECHNSS---DRIKVRVLDED 87 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE---TT--EEEECCCCCSCSSCEEEEEEEEEECSTT---CEEEEEEEECC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEE---CC--EEEECCccCCCCCCCcccEEEEEecCCC---CEEEEEEEECC
Confidence 5789999999999999998999999999998 32 4678999999999999999999997654 36999999999
Q ss_pred CC
Q psy11037 123 RV 124 (129)
Q Consensus 123 ~~ 124 (129)
..
T Consensus 88 ~~ 89 (148)
T 3kwu_A 88 DD 89 (148)
T ss_dssp CS
T ss_pred CC
Confidence 85
No 34
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.67 E-value=2.3e-16 Score=98.20 Aligned_cols=80 Identities=26% Similarity=0.451 Sum_probs=68.4
Q ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeecc-CCCCCccCcEEEEEecCCCCCccEEEEEEEE
Q psy11037 42 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLLD 120 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~-~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d 120 (129)
..+.|.|.|++|++|...+..+.+||||++++.+ .+.+|++++ +++||.|+|+|.|.+.. ....|.|+|||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d 79 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFD 79 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECC
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEE
Confidence 3567999999999999999888999999999832 246888887 89999999999999886 23479999999
Q ss_pred cCCCCCCCC
Q psy11037 121 WDRVTKNEA 129 (129)
Q Consensus 121 ~~~~~~~d~ 129 (129)
++.+++|+|
T Consensus 80 ~~~~~~d~~ 88 (136)
T 1wfj_A 80 KDVGTEDDA 88 (136)
T ss_dssp SSSCTTTCC
T ss_pred CCCCCCCce
Confidence 999988875
No 35
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.66 E-value=1.3e-16 Score=99.54 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=65.1
Q ss_pred CCEEEEEEEEEeCCCCCCCCCC-----------CCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCc
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGL-----------ADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDS 111 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~-----------~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~ 111 (129)
.+.|.|.|++|++|...+..+. +||||++.+ ++. ...+|+++.+++||.|||+|.|.+...
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l--~~~--~~~~T~~~~~t~nP~WnE~f~f~v~~~---- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNV--DDS--RIGQTATKQKTNSPAWHDEFVTDVCNG---- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEE--TTE--EEEECCCCSSCSSCEEEEEEEEEEEEE----
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEE--CCe--EeeeeeEECCCcCCccCCEEEEEecCC----
Confidence 3679999999999998774433 899999998 222 345788889999999999999998654
Q ss_pred cEEEEEEEEcCCCCCCCC
Q psy11037 112 VSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 112 ~~l~i~v~d~~~~~~~d~ 129 (129)
..|.|+|||+|.+++|||
T Consensus 77 ~~L~~~V~d~d~~~~dd~ 94 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDF 94 (136)
T ss_dssp CEEEEEEEECCSSSSCEE
T ss_pred CEEEEEEEeCCCCCCCCE
Confidence 379999999999888874
No 36
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.66 E-value=8.8e-16 Score=99.52 Aligned_cols=79 Identities=19% Similarity=0.220 Sum_probs=64.8
Q ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 42 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
..+.|.|.|++|++|...+..+.+||||++++. + .+.+|+++++++||.|||+|.|.+.. ...|.|+|||+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~--~---~~~kT~v~~~tlnP~Wne~f~f~v~~----~~~L~~~V~D~ 104 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVD--G---QSKKTEKCNNTNSPKWKQPLTVIVTP----VSKLHFRVWSH 104 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEET--T---EEEECCCCSSCSSCEEEEEEEEEECT----TCEEEEEEEEC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEEC--C---EEeEccccCCCCCCeECCEEEEEeCC----CCEEEEEEEEC
Confidence 457899999999999944444459999999982 2 57789999999999999999999853 34799999999
Q ss_pred CCCCCCCC
Q psy11037 122 DRVTKNEA 129 (129)
Q Consensus 122 ~~~~~~d~ 129 (129)
|.+++|+|
T Consensus 105 d~~~~dd~ 112 (173)
T 2nq3_A 105 QTLKSDVL 112 (173)
T ss_dssp CSSSCCEE
T ss_pred CCCCCCce
Confidence 99888764
No 37
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.66 E-value=1.2e-16 Score=98.29 Aligned_cols=81 Identities=33% Similarity=0.589 Sum_probs=66.3
Q ss_pred CCEEEEEEEEEeCCCCC---CCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEE
Q psy11037 43 ANRFTIVVLKARNLPKM---DVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLL 119 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~---~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~ 119 (129)
.+.|.|.|++|++|+.+ +..+.+||||++++.+.. ..+++|+++++++||.|||+|.|.+...... .|.|+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~--~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQEN--VLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCC--EEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCC--EEEEEEE
Confidence 46799999999999984 556789999999985432 2577899999999999999999999655433 7999999
Q ss_pred EcCCCCCCC
Q psy11037 120 DWDRVTKNE 128 (129)
Q Consensus 120 d~~~~~~~d 128 (129)
|++..+ ++
T Consensus 78 d~d~~~-~~ 85 (126)
T 1rlw_A 78 DANYVM-DE 85 (126)
T ss_dssp ECCSSC-CE
T ss_pred ECCCCC-Cc
Confidence 999874 54
No 38
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.63 E-value=4.2e-15 Score=113.60 Aligned_cols=99 Identities=35% Similarity=0.590 Sum_probs=86.4
Q ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCC
Q psy11037 28 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPAD 107 (129)
Q Consensus 28 ~~~G~l~~~~~~~~~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~ 107 (129)
..+|.|.+++.+ ..+.|.|.+++|++|..++..+.+||||++.+.+.+....+++|+++++++||.|||+|.|.+...
T Consensus 158 ~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~ 235 (674)
T 3pfq_A 158 ERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKES 235 (674)
T ss_dssp CCSCEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCST
T ss_pred ccccccccccee--ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccC
Confidence 457899998888 468999999999999999999999999999998876556678999999999999999999998766
Q ss_pred CCCccEEEEEEEEcCCCCCCCC
Q psy11037 108 NLDSVSLELLLLDWDRVTKNEA 129 (129)
Q Consensus 108 ~~~~~~l~i~v~d~~~~~~~d~ 129 (129)
+.. ..|.|+|||+|..+++||
T Consensus 236 ~~~-~~L~v~v~d~d~~~~dd~ 256 (674)
T 3pfq_A 236 DKD-RRLSVEIWDWDLTSRNDF 256 (674)
T ss_dssp TTT-CEEEEEEEECCSSSCCEE
T ss_pred Ccc-ceeeeEEeeccccccccc
Confidence 544 469999999999988874
No 39
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.54 E-value=1.9e-14 Score=107.36 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=66.2
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEcCC
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDR 123 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~~~ 123 (129)
+.|.|.|++|++|.. |..+.+||||++.+. + .+.+|+++++++||.|||+|.|.+.... ....|.|+|||+|.
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~--~---~~~kTkvik~tlNP~Wne~f~f~~~~~~-~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFG--G---QEFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWDADY 466 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEET--T---EEEECCCBCSCSSCBCCCCEEEEEEETT-TCCCEEEEEEECCS
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEEC--C---EeeeeeeecCCCCCCCCeEEEEEEecCC-CCCEEEEEEEECCC
Confidence 579999999999998 888999999999982 2 3589999999999999999999864211 12369999999999
Q ss_pred CCCCCC
Q psy11037 124 VTKNEA 129 (129)
Q Consensus 124 ~~~~d~ 129 (129)
.++|||
T Consensus 467 ~~~dD~ 472 (540)
T 3nsj_A 467 GWDDDL 472 (540)
T ss_dssp SSCCEE
T ss_pred CCCCCE
Confidence 988875
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=3.6e-14 Score=105.12 Aligned_cols=81 Identities=25% Similarity=0.372 Sum_probs=70.0
Q ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 42 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
..+.|.|.|++|++|+..+..+.+||||++.+ +. .+.+|+++.+++||.|+|+|.|.+..... ..|.|+|||+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~---~~--~~~~T~~~~~t~nP~w~e~f~f~~~~~~~--~~l~~~v~d~ 457 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISM---GS--QSYTTRTIQDTLNPKWNFNCQFFIKDLYQ--DVLCLTLFDR 457 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE---TT--EEEECCCCSSCSSCEEEEEEEEEESCTTT--CEEEEEEEEC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEE---CC--eeccCCccCCCCCCccCceEEEEecCCCC--CEEEEEEEeC
Confidence 44689999999999999999999999999998 22 46789999999999999999999875543 4799999999
Q ss_pred CCCCCCCC
Q psy11037 122 DRVTKNEA 129 (129)
Q Consensus 122 ~~~~~~d~ 129 (129)
|.+++|||
T Consensus 458 d~~~~~d~ 465 (510)
T 3jzy_A 458 DQFSPDDF 465 (510)
T ss_dssp CSSSSCCE
T ss_pred CCCCCCCc
Confidence 99988875
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.53 E-value=2.9e-14 Score=108.04 Aligned_cols=86 Identities=26% Similarity=0.493 Sum_probs=71.6
Q ss_pred CCCEEEEEEEEEeCCCCCCC--CCCCCcEEEEEEEeCCeEeeEEeeeeccCC-CCCccCcEEEEEecCCCCCccEEEEEE
Q psy11037 42 AANRFTIVVLKARNLPKMDV--TGLADPYVKVYLLYKGQRVAKKKTHVKKRT-LNPVYNESFVFEVPADNLDSVSLELLL 118 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~--~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~-~~P~~~e~~~f~i~~~~~~~~~l~i~v 118 (129)
....|.|.|++|++|+..+. .+.+||||++.+........+.+|+++.++ +||.|||+|.|.+..+++. .|.|+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~--~L~~~V 572 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLA--LVRFMV 572 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGC--EEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCC--EEEEEE
Confidence 34689999999999998873 678999999998643223356799999887 9999999999999877765 799999
Q ss_pred EEcCCCCCCCC
Q psy11037 119 LDWDRVTKNEA 129 (129)
Q Consensus 119 ~d~~~~~~~d~ 129 (129)
||+|.++++||
T Consensus 573 ~D~D~~~~dd~ 583 (624)
T 1djx_A 573 EDYDSSSKNDF 583 (624)
T ss_dssp EECCSSSCCEE
T ss_pred EEcCCCCCCce
Confidence 99999888764
No 42
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.49 E-value=4.8e-14 Score=87.44 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=55.8
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeec-cCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVK-KRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~-~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
.+.|.|+|++|+++.. .+.+||||++. .. ..+|.++ .++.||.|||+|.|.+...+ ..|.|+|||+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~-----~~kt~~~~~~t~nP~WnE~f~f~v~~~~---~~L~~~V~D~ 70 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQ-----NVKSTTIAVRGSQPSWEQDFMFEINRLD---LGLTVEVWNK 70 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ET-----TEEEECCCEESSSCEEEEEEEEEECCCS---SEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ec-----CEEEeEecCCCCCceECCEEEEEEeCCC---CeEEEEEEEC
Confidence 3579999999998742 56789999998 11 2234333 46899999999999997543 3599999999
Q ss_pred CCCCCCCC
Q psy11037 122 DRVTKNEA 129 (129)
Q Consensus 122 ~~~~~~d~ 129 (129)
| +++|||
T Consensus 71 d-~~~dd~ 77 (131)
T 2cjt_A 71 G-LIWDTM 77 (131)
T ss_dssp C-SSCEEE
T ss_pred C-CCCCCe
Confidence 9 777764
No 43
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.44 E-value=2.1e-13 Score=87.88 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=56.5
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeec-cCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVK-KRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~-~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
.+.|.|.|++|+++. ..+.+||||++. .. ..+|.++ .++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~-----~~kt~~~~~~t~nP~WnE~f~f~v~~~~---~~L~~~V~D~ 79 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQ-----NVESTTIAVRGSQPSWEQDFMFEINRLD---LGLTVEVWNK 79 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ET-----TEEEECCCEESSSCEEEEEEEEECCCTT---SEEEEEEEEC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ec-----ceEEEEecCCCCCCCCCCEEEEEeeCCC---CEEEEEEEEC
Confidence 458999999999874 257789999998 11 2344444 46899999999999988543 3599999999
Q ss_pred CCCCCCCC
Q psy11037 122 DRVTKNEA 129 (129)
Q Consensus 122 ~~~~~~d~ 129 (129)
| +++|||
T Consensus 80 d-~~~dd~ 86 (167)
T 2cjs_A 80 G-LIWDTM 86 (167)
T ss_dssp C-SSCCEE
T ss_pred C-CCCCce
Confidence 9 777764
No 44
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.42 E-value=9.5e-14 Score=106.66 Aligned_cols=83 Identities=33% Similarity=0.569 Sum_probs=69.6
Q ss_pred CCCEEEEEEEEEeCCCC---CCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEE
Q psy11037 42 AANRFTIVVLKARNLPK---MDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLL 118 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~---~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v 118 (129)
..+.|.|.|++|++|+. ++..+.+||||++++.+.. ..+.+|+++++++||.|||+|.|.+...... .|.|+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~--~L~~~V 91 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQEN--VLEITL 91 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCC--BCEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEEEecCCCCC--EEEEEE
Confidence 46789999999999998 7777889999999985422 2577899999999999999999999875433 689999
Q ss_pred EEcCCCCCCCC
Q psy11037 119 LDWDRVTKNEA 129 (129)
Q Consensus 119 ~d~~~~~~~d~ 129 (129)
||+|.++ |||
T Consensus 92 ~D~D~~~-ddf 101 (749)
T 1cjy_A 92 MDANYVM-DET 101 (749)
T ss_dssp EECCSSS-CEE
T ss_pred EECCCCC-Cce
Confidence 9999987 653
No 45
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.38 E-value=1.4e-12 Score=81.09 Aligned_cols=77 Identities=19% Similarity=0.234 Sum_probs=66.2
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeecc-CCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~-~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
..-|.|.+.+|.+|+ +.+|||+++.+ +..+++|++++ ++.+|.|||.|.|++..+....-.|.|.|+|+
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~F-----Rg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~ 89 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTF-----RGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNY 89 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEE-----TTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEE
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEE-----eccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEEC
Confidence 346889999999997 46899999998 23588999997 69999999999999988777777899999999
Q ss_pred CCCCCCCC
Q psy11037 122 DRVTKNEA 129 (129)
Q Consensus 122 ~~~~~~d~ 129 (129)
++++++.+
T Consensus 90 ~~v~~nrl 97 (144)
T 3l9b_A 90 SKVFSNKL 97 (144)
T ss_dssp CTTSCCEE
T ss_pred ccccCCCE
Confidence 99988753
No 46
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.12 E-value=2.2e-10 Score=88.93 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=58.9
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCC--eEeeEEeeeeccC-CCCCccCcE-EEEE-ecCCCCCccEEEEEE
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG--QRVAKKKTHVKKR-TLNPVYNES-FVFE-VPADNLDSVSLELLL 118 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~--~~~~~~~T~~~~~-~~~P~~~e~-~~f~-i~~~~~~~~~l~i~v 118 (129)
..|.|.|++|++|+.. ..||||++.+.+.. ....+++|+++.+ ++||.|||+ |.|. +..+++. .|+|+|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela--~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLA--VVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGC--EEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCcc--EEEEEE
Confidence 5799999999999754 58999999987422 1225678998875 699999998 9998 8777766 799999
Q ss_pred EEcC
Q psy11037 119 LDWD 122 (129)
Q Consensus 119 ~d~~ 122 (129)
||++
T Consensus 724 ~D~d 727 (816)
T 3qr0_A 724 SEEN 727 (816)
T ss_dssp EETT
T ss_pred EecC
Confidence 9985
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.08 E-value=2.9e-10 Score=88.88 Aligned_cols=73 Identities=25% Similarity=0.343 Sum_probs=58.0
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeC-CeEeeEEeeeeccC-CCCCccCc-EEEEE-ecCCCCCccEEEEEEE
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYK-GQRVAKKKTHVKKR-TLNPVYNE-SFVFE-VPADNLDSVSLELLLL 119 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~-~~~~~~~~T~~~~~-~~~P~~~e-~~~f~-i~~~~~~~~~l~i~v~ 119 (129)
..|.|.|++|++|+.. ..||||++.+... .....+++|+++.+ ++||.||| +|.|. +..+++. .|+|+||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela--~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLA--SLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGC--EEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcC--EEEEEEE
Confidence 3699999999999753 5899999998742 11123468998865 59999999 79998 7777766 7999999
Q ss_pred EcC
Q psy11037 120 DWD 122 (129)
Q Consensus 120 d~~ 122 (129)
|+|
T Consensus 799 D~d 801 (885)
T 3ohm_B 799 EEG 801 (885)
T ss_dssp ETT
T ss_pred cCC
Confidence 987
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.07 E-value=4.1e-10 Score=87.52 Aligned_cols=74 Identities=27% Similarity=0.457 Sum_probs=58.6
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeC-CeEeeEEeee-ecc-CCCCCccCc-EEEE-EecCCCCCccEEEEE
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYK-GQRVAKKKTH-VKK-RTLNPVYNE-SFVF-EVPADNLDSVSLELL 117 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~-~~~~~~~~T~-~~~-~~~~P~~~e-~~~f-~i~~~~~~~~~l~i~ 117 (129)
.+.|.|.|++|++|+. +..||||++.+... .....+++|+ ++. +++||.||| +|.| .+..+++. .|+|+
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~--~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELA--SLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGC--EEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCcc--EEEEE
Confidence 3479999999999975 35899999998642 1222356898 775 469999999 7999 88877777 79999
Q ss_pred EEEcC
Q psy11037 118 LLDWD 122 (129)
Q Consensus 118 v~d~~ 122 (129)
|||+|
T Consensus 751 V~D~d 755 (799)
T 2zkm_X 751 VMEEG 755 (799)
T ss_dssp EEETT
T ss_pred EEEeC
Confidence 99986
No 49
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.98 E-value=3e-11 Score=89.26 Aligned_cols=74 Identities=24% Similarity=0.310 Sum_probs=7.9
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCC---CCCccCcEEEEEecCCCCCccEEEEEEEE
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRT---LNPVYNESFVFEVPADNLDSVSLELLLLD 120 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~---~~P~~~e~~~f~i~~~~~~~~~l~i~v~d 120 (129)
+.|.|.|++|++|+.++ ||||++++.. ....+|++++++ +||.|||+|.|.+... . ..|.|+|||
T Consensus 11 ~~L~V~VieAk~L~~~d-----dpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~--~~L~v~V~d 78 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK-----RYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNLPA-V--RALRLHLYR 78 (483)
T ss_dssp ECC------------------------------------------------------CCEECC-----------------
T ss_pred cEEEEEEEEcCCcCCCC-----CCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecCCC-c--cEEEEEEEe
Confidence 56899999999998876 9999998832 134588889888 9999999999986433 2 368999999
Q ss_pred -cC---CCCCCCC
Q psy11037 121 -WD---RVTKNEA 129 (129)
Q Consensus 121 -~~---~~~~~d~ 129 (129)
+| ..++++|
T Consensus 79 ~~d~~~~~~~d~~ 91 (483)
T 3bxj_A 79 DSDKKRKKDKAGY 91 (483)
T ss_dssp -------------
T ss_pred cCCccccCCCCce
Confidence 45 2556654
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.02 E-value=0.00027 Score=42.82 Aligned_cols=73 Identities=15% Similarity=0.126 Sum_probs=46.4
Q ss_pred CEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEee-eeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 44 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKT-HVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T-~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
.-|+|.+.+..--..+......|||+.+.+...-.. ...+| ....++..|.|+++|...+..- +.|.|.|++.
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~-e~g~t~~~K~kT~~P~Wne~Fd~~V~~G----r~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALST-ERGKTLVQKKPTMYPEWKSTFDAHIYEG----RVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEE-TTEEEEECCSCCBCCCTTCEEEEECCTT----CEEEEEEEEE
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEc-ccceeecccCCCCCcCccceEEeeeeCC----EEEEEEEEcC
Confidence 346666655543222222345899999988432100 01233 5667899999999999888754 4788999864
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.80 E-value=0.00055 Score=42.05 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=44.7
Q ss_pred CEEEEEEEEEeCCCCCC-CCCCCCcEEEEEEEeCCeEeeEEee-eeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEc
Q psy11037 44 NRFTIVVLKARNLPKMD-VTGLADPYVKVYLLYKGQRVAKKKT-HVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 121 (129)
Q Consensus 44 ~~L~v~i~~a~~l~~~~-~~~~~~pyv~~~l~~~~~~~~~~~T-~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~ 121 (129)
.-|+|.+.+..-..... .....|||+.+.+...- .....+| ..+.++..|.|+++|...+..- +.|.|.|++.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~-~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G----r~l~i~Vfh~ 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYV-ESENGQMYIQKKPTMYPPWDSTFDAHINKG----RVMQIIVKGK 84 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEE-EETTEEEEEEEEEEECCCSSSEEEECCCSS----CEEEEEEECS
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeee-eccCceeecccCCCCCccccceEeeeEECC----eEEEEEEEcC
Confidence 34566665554333222 13358999999885320 0011334 3445688999999988887753 4788999954
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=91.77 E-value=0.67 Score=30.71 Aligned_cols=43 Identities=12% Similarity=0.261 Sum_probs=35.5
Q ss_pred eEEeeeeccCCCCCccCcEEEEEecCCCCCccEEEEEEEEcCC
Q psy11037 81 AKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDR 123 (129)
Q Consensus 81 ~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~~~~l~i~v~d~~~ 123 (129)
...+|.+...+-+|.|+|++.+.++.+.....-|.|++++...
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 4556777788899999999999999988877778999887653
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=91.56 E-value=1.3 Score=35.49 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=53.7
Q ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEee-EEeeeeccCCCCCccCcEEEEEecCCCCC-ccEEEEEEE
Q psy11037 42 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVA-KKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLL 119 (129)
Q Consensus 42 ~~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~-~~~T~~~~~~~~P~~~e~~~f~i~~~~~~-~~~l~i~v~ 119 (129)
-...+.|.|..+.++... ...+-||.+.+-.++.... ...|..+....+|.|||-+.|++.-.++. ...|.|+||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 357899999999887543 3457788888776665432 23344444466799999999998666643 456889999
Q ss_pred EcC
Q psy11037 120 DWD 122 (129)
Q Consensus 120 d~~ 122 (129)
+..
T Consensus 292 ~~~ 294 (940)
T 2wxf_A 292 AVV 294 (940)
T ss_dssp EEC
T ss_pred Eec
Confidence 964
No 54
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=90.62 E-value=1.9 Score=34.78 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=53.4
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEeeEEeeeeccCCCCCccCcEEEEEecCCCCC-ccEEEEEEEEc
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLDW 121 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~~~~T~~~~~~~~P~~~e~~~f~i~~~~~~-~~~l~i~v~d~ 121 (129)
+..+.|.|..+....... ....+-||.+.+-.++......+|..+.-..++.|||-+.|++.-.++. ...|-|+||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 467889998876422111 2235678888877776655555565554556799999999998666543 35688899975
Q ss_pred C
Q psy11037 122 D 122 (129)
Q Consensus 122 ~ 122 (129)
.
T Consensus 296 ~ 296 (961)
T 1e7u_A 296 A 296 (961)
T ss_dssp E
T ss_pred c
Confidence 4
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=86.58 E-value=3.2 Score=33.91 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=52.6
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEee-EEeeeeccCCCCCccCcEEEEEecCCCCC-ccEEEEEEEE
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVA-KKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLD 120 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~-~~~T~~~~~~~~P~~~e~~~f~i~~~~~~-~~~l~i~v~d 120 (129)
...+.|.|..+.++.... ....+-||.+.+-.++.... ...|..+. ..++.|||-+.|++.-.++. ...|-|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 578999999987775332 33467799988876554332 23343332 34678999999998666543 3568889998
Q ss_pred cCC
Q psy11037 121 WDR 123 (129)
Q Consensus 121 ~~~ 123 (129)
...
T Consensus 432 ~~~ 434 (1091)
T 3hhm_A 432 VKG 434 (1091)
T ss_dssp CCC
T ss_pred ecC
Confidence 553
No 56
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=85.45 E-value=1.1 Score=36.44 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=53.3
Q ss_pred CCEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEeCCeEee-EEeeeeccCCCCCccCcEEEEEecCCCCC-ccEEEEEEEE
Q psy11037 43 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVA-KKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLD 120 (129)
Q Consensus 43 ~~~L~v~i~~a~~l~~~~~~~~~~pyv~~~l~~~~~~~~-~~~T~~~~~~~~P~~~e~~~f~i~~~~~~-~~~l~i~v~d 120 (129)
...+.|.|..+.++... ...+-||.+.+-.++.... ...|..+....+|.|||-+.|++.-.++. ...|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999988777543 3467788877766554332 23344444466799999999998777654 4568899998
Q ss_pred cC
Q psy11037 121 WD 122 (129)
Q Consensus 121 ~~ 122 (129)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 57
>2rrl_A FLIK, flagellar HOOK-length control protein; FLHB, bacterial flagella motor, P transport; NMR {Salmonella typhimurium}
Probab=27.43 E-value=88 Score=19.69 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=22.7
Q ss_pred ccccccCcceEEEEEEEEeCCCCEEEEEEEE
Q psy11037 22 SSEIKSQGRGEILLSLCWQPAANRFTIVVLK 52 (129)
Q Consensus 22 ~~~~~~~~~G~l~~~~~~~~~~~~L~v~i~~ 52 (129)
++.+.....|+|.|++... .+.+.+.+..
T Consensus 90 ~IrL~PpeLG~l~V~l~~~--~~q~~v~f~a 118 (169)
T 2rrl_A 90 QLRLHPEELGQVHISLKLD--DNQAQLQMVS 118 (169)
T ss_dssp EECCSSGGGCCEEEEEEEE--TTEEEEEEEC
T ss_pred EEEECccccCcEEEEEEEE--CCEEEEEEEc
Confidence 5677778889999999986 5677777764
Done!