Query psy11040
Match_columns 346
No_of_seqs 290 out of 1558
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 16:34:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iqy_A Phosphatidylethanolamin 100.0 2.8E-40 9.5E-45 298.0 18.1 178 131-345 6-188 (190)
2 2jyz_A CG7054-PA, GH14779P, PE 100.0 5.5E-40 1.9E-44 293.4 15.9 172 136-345 2-178 (179)
3 3axy_A Protein heading DATE 3A 100.0 8.6E-36 2.9E-40 264.3 15.7 159 130-335 8-170 (170)
4 1wko_A Terminal flower 1 prote 100.0 1.1E-35 3.6E-40 265.9 15.7 162 128-335 10-175 (180)
5 2gzq_A Phosphatidylethanolamin 100.0 9.5E-35 3.3E-39 263.8 13.3 165 131-333 16-199 (200)
6 1wpx_B Carboxypeptidase Y inhi 100.0 5.4E-33 1.8E-37 255.6 16.5 163 130-334 13-220 (220)
7 1fux_A Hypothetical 19.5 kDa p 99.7 1.2E-16 4E-21 140.9 9.9 94 159-294 9-135 (166)
8 1fjj_A Hypothetical 17.1 kDa p 99.6 7.7E-15 2.6E-19 128.3 10.6 80 172-294 30-132 (159)
9 3n08_A Putative phosphatidylet 99.5 1.3E-13 4.5E-18 119.8 14.9 119 160-331 11-148 (153)
10 2evv_A Hypothetical protein HP 99.4 1.8E-12 6E-17 117.8 10.6 117 163-334 47-200 (207)
11 2iqy_A Phosphatidylethanolamin 98.9 5.6E-10 1.9E-14 100.1 2.7 86 186-271 86-181 (190)
12 2jyz_A CG7054-PA, GH14779P, PE 98.7 2.8E-09 9.6E-14 94.6 2.4 75 195-270 90-170 (179)
13 3axy_A Protein heading DATE 3A 98.6 1.4E-08 4.9E-13 89.3 3.4 80 186-268 86-170 (170)
14 1wko_A Terminal flower 1 prote 98.5 4.8E-08 1.6E-12 86.7 2.9 81 186-268 90-175 (180)
15 1wpx_B Carboxypeptidase Y inhi 98.1 4.5E-07 1.5E-11 82.8 0.5 67 200-267 145-220 (220)
16 2gzq_A Phosphatidylethanolamin 98.0 3.7E-06 1.3E-10 75.8 5.2 105 128-234 23-157 (200)
17 1fux_A Hypothetical 19.5 kDa p 97.3 0.00013 4.3E-09 63.8 3.3 32 202-233 103-135 (166)
18 1fjj_A Hypothetical 17.1 kDa p 96.7 0.0012 4E-08 57.3 3.9 31 202-233 101-132 (159)
19 3n08_A Putative phosphatidylet 96.1 0.0036 1.2E-07 53.9 3.9 30 202-233 95-124 (153)
20 2evv_A Hypothetical protein HP 95.0 0.015 5.1E-07 52.4 3.8 30 203-234 144-174 (207)
21 3kxy_T EXSE; type-three secret 69.7 2 6.7E-05 30.2 1.6 38 61-98 11-49 (66)
22 4b1v_M Phosphatase and actin r 21.5 32 0.0011 21.2 1.0 11 55-65 18-28 (32)
No 1
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A
Probab=100.00 E-value=2.8e-40 Score=297.96 Aligned_cols=178 Identities=39% Similarity=0.677 Sum_probs=162.3
Q ss_pred hhhcc--cccccchhhcc-ceeEEEEeCCCeeecCCcccCcccccCCCe-EEEecCC-CceeEEEeecCcCCCceeEeec
Q psy11040 131 RIKSE--QESVRDLLELQ-GALQMIVYPNNSKVSLGNELTPTSVKDEPT-VTWDAEP-AGTYTLIMSGSDIHSGKVLAEY 205 (346)
Q Consensus 131 kvf~e--~~IiPDVl~~~-~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~-v~~~~~~-~~~ytl~m~DpD~p~~~~~~~Y 205 (346)
+.+++ ++|+||+++.. ...|.|.|+++..|.+|+.|++.++...|. ++|+..+ ++.|||+|+|||+|+++
T Consensus 6 ~~~~~~~~~vipdvl~~~p~~~l~v~~~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~----- 80 (190)
T 2iqy_A 6 ADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRK----- 80 (190)
T ss_dssp CCGGGTTSTTCGGGTSSCCSEECEEECSSCBCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSS-----
T ss_pred HHHHHhcCccCCcCcCCCCCceEEEEECCCcccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCC-----
Confidence 56778 99999999986 889999997667899999999999999999 9998754 68999999999999876
Q ss_pred cCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCccCCcccccccCCCCCCCCCCccEEEEEe
Q psy11040 206 IGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVF 285 (346)
Q Consensus 206 ~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf 285 (346)
+| .+++++||++.||+++.+..|..+++|.||+||+|+|.|||+|+||
T Consensus 81 ----------------------------~p----~~~~~~HWlv~nIp~~~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly 128 (190)
T 2iqy_A 81 ----------------------------DP----KFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVY 128 (190)
T ss_dssp ----------------------------SC----TTCCEEEEEEEEEETTBGGGSEEEECCCCCCCCTTSCCEEEEEEEE
T ss_pred ----------------------------CC----CcCCEEEEEEeCCChhccccCccccceeCCCCcCCCCceEEEEEEE
Confidence 45 5779999999999999888898999999999999999999999999
Q ss_pred eeCCCCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCCCHHHHHhhcC
Q psy11040 286 KQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFM 345 (346)
Q Consensus 286 ~Q~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~~v~~~~~~~~ 345 (346)
+|+..+++.++.+.+.+..+|.+||+++|+++++|+.|||||||++|||++|+++++|++
T Consensus 129 ~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pVA~~fF~~q~d~~v~~~~~~~~ 188 (190)
T 2iqy_A 129 EQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLHDQLA 188 (190)
T ss_dssp ECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHHTTCCSCSEEEEEEECCCTTHHHHHHHHT
T ss_pred EeCCccCcchhhccCCCcccCCCcCHHHHHHHhCCCCeeEEEEEEEEccCchHHHHHHhc
Confidence 999988887766666667899999999999999999999999999999999999999974
No 2
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}
Probab=100.00 E-value=5.5e-40 Score=293.42 Aligned_cols=172 Identities=44% Similarity=0.818 Sum_probs=154.8
Q ss_pred cccccchhhcc-ceeEEEEeCCCeeecCCcccCcccccCCCeEEEecCCC--ceeEEEeecCcCCCceeEeeccCCCCCC
Q psy11040 136 QESVRDLLELQ-GALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEPA--GTYTLIMSGSDIHSGKVLAEYIGSGPPL 212 (346)
Q Consensus 136 ~~IiPDVl~~~-~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~v~~~~~~~--~~ytl~m~DpD~p~~~~~~~Y~~p~p~~ 212 (346)
.+|+||+++.. ...|.|.|+++..|.+|+.|+++++...|.++|+..++ +.|+|+|+|||+|+++
T Consensus 2 ~~vipdvl~~~P~~~l~V~y~~~~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~------------ 69 (179)
T 2jyz_A 2 DDIVPDVLDAVPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQ------------ 69 (179)
T ss_dssp CCBTTTTBSSCCSEECEEESSSSCCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTT------------
T ss_pred CcccCcCcCCCCcCeEEEEECCCcccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCc------------
Confidence 47899999886 89999999866799999999999999999999987554 7999999999999876
Q ss_pred CCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCC--CccCCcccccccCCCCCCCCCCccEEEEEeeeCCC
Q psy11040 213 GTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGS--DIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQTGY 290 (346)
Q Consensus 213 gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~--~~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf~Q~~~ 290 (346)
+| ..++++||++.||+++ .++.|..+++|.||+||+|+|.|||+|+||+|+..
T Consensus 70 ---------------------~p----~~~~~~HWlv~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~ 124 (179)
T 2jyz_A 70 ---------------------DP----KYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENK 124 (179)
T ss_dssp ---------------------CC----SSCCCSCCEEECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSC
T ss_pred ---------------------cC----CCccEEEEEEECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCc
Confidence 45 5678999999999987 57788889999999999999999999999999988
Q ss_pred CCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCCCHHHHHhhcC
Q psy11040 291 IDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDNYVPILHRQFM 345 (346)
Q Consensus 291 ~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~~v~~~~~~~~ 345 (346)
++ .++.+.+.+..+|.+||+++|+++++|+.|||||||+||||++|+++++|++
T Consensus 125 l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA~~~F~~q~d~~v~~~~~~~~ 178 (179)
T 2jyz_A 125 IE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYDDYVPIRNKTIV 178 (179)
T ss_dssp CC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSEEEEEEECCCTHHHHHHHTCC
T ss_pred CC-chhhccCCCcccCCCcCHHHHHHHhCCCCccEEEEEEEEecCchHHHHHHhc
Confidence 77 5555555567899999999999999999999999999999999999999985
No 3
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A
Probab=100.00 E-value=8.6e-36 Score=264.25 Aligned_cols=159 Identities=32% Similarity=0.545 Sum_probs=141.7
Q ss_pred Hhhhcccccccchhhcc--ceeEEEEeCCCeeecCCcccCcccccCCCeEEEecCC-CceeEEEeecCcCCCceeEeecc
Q psy11040 130 RRIKSEQESVRDLLELQ--GALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEP-AGTYTLIMSGSDIHSGKVLAEYI 206 (346)
Q Consensus 130 ~kvf~e~~IiPDVl~~~--~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~v~~~~~~-~~~ytl~m~DpD~p~~~~~~~Y~ 206 (346)
++.+...+|+||+++.+ ...|.|.|++ ..|.+|+.|+++++..+|.++|+..+ +++|||+|+|||+|+++
T Consensus 8 ~~~l~~~~vipdvl~~F~P~~~l~v~y~s-~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~------ 80 (170)
T 3axy_A 8 RDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPS------ 80 (170)
T ss_dssp TCHHHHTTHHHHTBCCCCCCSCEEEEETT-EECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTT------
T ss_pred hchhhhCCccccccCCcCCceEEEEEECC-eEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCc------
Confidence 46778899999999996 8899999987 78999999999999999999998743 68999999999999866
Q ss_pred CCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCC-CccCCcccccccCCCCCCCCCCccEEEEEe
Q psy11040 207 GSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGS-DIHSGKVLAEYIGSGPPLGTGLHRYIFYVF 285 (346)
Q Consensus 207 ~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~-~~~~~~~~~~Y~~P~Pp~gsg~HRYvflLf 285 (346)
+| ++++++||++.||+++ ....|..+++|.||+|| +|.|||+|+||
T Consensus 81 ---------------------------~p----~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRY~f~ly 127 (170)
T 3axy_A 81 ---------------------------DP----NLREYLHWLVTDIPGTTAASFGQEVMSYESPRPT--MGIHRLVFVLF 127 (170)
T ss_dssp ---------------------------SC----TTCSEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEEEE
T ss_pred ---------------------------cC----CCccEEEEEEeCCCCCccccCCceeceecCCCCC--CCcEEEEEEEE
Confidence 45 5779999999999987 35667789999999999 56999999999
Q ss_pred eeCCCCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCC
Q psy11040 286 KQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDN 335 (346)
Q Consensus 286 ~Q~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~ 335 (346)
+|+..+++.+ ..+|.+||+++|+++++|+.|||||||+||||.
T Consensus 128 ~q~~~l~~~~-------p~~R~~F~~~~F~~~~~Lg~Pva~~fF~~q~d~ 170 (170)
T 3axy_A 128 QQLGRQTVYA-------PGWRQNFNTKDFAELYNLGSPVAAVYFNSQREA 170 (170)
T ss_dssp ECSSCCCCCC-------CSCSTTCCHHHHHHHTTCCSCSEEEEEEECCCC
T ss_pred ecCCccCCCC-------ccccCCcCHHHHHHHhCCCCcEEEEEEEEEecC
Confidence 9999877654 257999999999999999999999999999985
No 4
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A
Probab=100.00 E-value=1.1e-35 Score=265.93 Aligned_cols=162 Identities=31% Similarity=0.493 Sum_probs=142.2
Q ss_pred HHHhhhcccccccchhhcc--ceeEEEEeCCCeeecCCcccCcccccCCCeEEEecCC-CceeEEEeecCcCCCceeEee
Q psy11040 128 LARRIKSEQESVRDLLELQ--GALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDAEP-AGTYTLIMSGSDIHSGKVLAE 204 (346)
Q Consensus 128 L~~kvf~e~~IiPDVl~~~--~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~v~~~~~~-~~~ytl~m~DpD~p~~~~~~~ 204 (346)
+..+.+...+++||+++.+ ...|.|.|++ ..|.+|+.|++++++.+|.++|+..+ +.+|||+|+|||+|+++
T Consensus 10 ~~~~~l~~~~vipdvl~~f~P~~~l~V~y~s-~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~---- 84 (180)
T 1wko_A 10 RVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPS---- 84 (180)
T ss_dssp CTTHHHHHTTHHHHTBCCCCCCSEEEEEETT-EECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTT----
T ss_pred HHHHHHHhCCCCCCccCCcCCCeeEEEEECC-eEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCc----
Confidence 3456778899999999986 8999999987 79999999999999999999998743 56999999999999876
Q ss_pred ccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCc-cCCcccccccCCCCCCCCCCccEEEE
Q psy11040 205 YIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDI-HSGKVLAEYIGSGPPLGTGLHRYIFY 283 (346)
Q Consensus 205 Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~-~~~~~~~~Y~~P~Pp~gsg~HRYvfl 283 (346)
+| .+++++||++.||+++.. ..|..+++|.||+|| +|.|||+|+
T Consensus 85 -----------------------------~p----~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRYvf~ 129 (180)
T 1wko_A 85 -----------------------------DP----FLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPS--IGIHRFVFV 129 (180)
T ss_dssp -----------------------------BC----TTCCEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEE
T ss_pred -----------------------------cC----CCccEEEEEEeccCcCccccCCceeeeeCCCCCC--CCceEEEEE
Confidence 45 578999999999998753 457899999999997 679999999
Q ss_pred EeeeCCCCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecCC
Q psy11040 284 VFKQTGYIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYDN 335 (346)
Q Consensus 284 Lf~Q~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d~ 335 (346)
||+|+..+++.+ +..+|.+||+++|+++++|+.|||||||++|||+
T Consensus 130 ly~q~~~l~~~~------~~~~R~~F~~~~F~~~~~Lg~PVa~~fF~~q~d~ 175 (180)
T 1wko_A 130 LFRQKQRRVIFP------NIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRET 175 (180)
T ss_dssp EEECCTTCCCCC------CCCCSTTCCHHHHHHHTTCCSEEEEEEEEECCC-
T ss_pred EEecCCccCCCC------CccccCCcCHHHHHHHhCCCCcEEEEEEEEEECC
Confidence 999999877643 2468999999999999999999999999999997
No 5
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=100.00 E-value=9.5e-35 Score=263.77 Aligned_cols=165 Identities=22% Similarity=0.339 Sum_probs=141.9
Q ss_pred hhhcccccccchhhc--c--ceeEEEEeCCCeeecCCcccCcccccCCCe-EEEecC--CCceeEEEeecCcCCCceeEe
Q psy11040 131 RIKSEQESVRDLLEL--Q--GALQMIVYPNNSKVSLGNELTPTSVKDEPT-VTWDAE--PAGTYTLIMSGSDIHSGKVLA 203 (346)
Q Consensus 131 kvf~e~~IiPDVl~~--~--~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~-v~~~~~--~~~~ytl~m~DpD~p~~~~~~ 203 (346)
+.+++.+|+||+++. + ...|.|.|+++..|.+|+.|++++++..|. ++|+.. ..++|||+|+|||+|+++
T Consensus 16 ~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~~--- 92 (200)
T 2gzq_A 16 EELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPSRR--- 92 (200)
T ss_dssp HHHHHTTHHHHTSSSSCCCCCCCEEEEEETTEEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSCSS---
T ss_pred HHHHhCCccCcccCCCCCcceeEEEEEECCCcccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCCCC---
Confidence 556779999999974 4 789999998668999999999999999998 999874 357899999999999865
Q ss_pred eccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCccCCc-----ccccccCCCCCCCCCCc
Q psy11040 204 EYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSGK-----VLAEYIGSGPPLGTGLH 278 (346)
Q Consensus 204 ~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~~-----~~~~Y~~P~Pp~gsg~H 278 (346)
+| ..++++||++.||+++.+..|. .+++|.||+||+|+|+|
T Consensus 93 ------------------------------~~----~~~~~~HWlv~nIp~~~~~~g~~~~~~~~~~Y~gP~Pp~g~g~H 138 (200)
T 2gzq_A 93 ------------------------------RP----DGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKGTGLH 138 (200)
T ss_dssp ------------------------------CC----TTCSEEEEEEEEECSSEEETTCCTTCEEEECCCCCCCCTTSCCE
T ss_pred ------------------------------CC----CCCCEEEEEEeCCCcCcccCCccCCCcceeeeeCCCCcCCCCcc
Confidence 44 5678999999999987665554 78999999999999999
Q ss_pred cEEEEEe--eeCCCCCcCC-CCCCCCCCCCCCCcChH----HHHHHhCCCCceEEEEEEEec
Q psy11040 279 RYIFYVF--KQTGYIDFTE-PYSSNTSAEGRLGFSTQ----NFADKYKLGSPVAGNFYLAQY 333 (346)
Q Consensus 279 RYvflLf--~Q~~~~~~~~-~~~~~~~~~~R~~F~~~----~F~~~~~L~~pva~n~F~~~~ 333 (346)
||+|+|| +|++.+++.+ +....+...+|.+||++ +|++++||+ |||+|||++|+
T Consensus 139 RYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R~~F~~~~gv~~F~~~~gL~-pVganfF~~~n 199 (200)
T 2gzq_A 139 RISFILSLVKEENKGNVTGVPLYRGEHYITRVKFNNCQSAYNVIQMNDMK-IVGFNWCQMRR 199 (200)
T ss_dssp EEEEEEEEEEGGGTTCBTTBCCCCCGGGCCTTHHHHTCCHHHHHHHTTCE-EEEEEEEEEEC
T ss_pred eEEEEEEEecccCcccccccCccccccccccCccccchhhHHHHHHcCCE-EEEEEEEEEec
Confidence 9999985 9999877755 44444556799999998 899999995 99999999996
No 6
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1
Probab=100.00 E-value=5.4e-33 Score=255.57 Aligned_cols=163 Identities=23% Similarity=0.458 Sum_probs=138.5
Q ss_pred Hhhhcccccccchhhc--c--ceeEEEEeCCCeeecCCcccCcccccCCCeEEEec----------------CCCceeEE
Q psy11040 130 RRIKSEQESVRDLLEL--Q--GALQMIVYPNNSKVSLGNELTPTSVKDEPTVTWDA----------------EPAGTYTL 189 (346)
Q Consensus 130 ~kvf~e~~IiPDVl~~--~--~~~L~V~y~n~~~v~~G~~l~~~~~~~~P~v~~~~----------------~~~~~ytl 189 (346)
++.+++++|+|||++. + ...|.|.|+++..|.+|+.|+++++...|.|+|.. +..+.|+|
T Consensus 13 ~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~~~l 92 (220)
T 1wpx_B 13 IDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTL 92 (220)
T ss_dssp HHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEEE
T ss_pred HHHHHhCCCCccccCCcCCCCceEEEEEECCCcEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCceEEE
Confidence 4667789999999999 5 89999999986789999999999999999998872 24578999
Q ss_pred EeecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCC---------c---
Q psy11040 190 IMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSD---------I--- 257 (346)
Q Consensus 190 ~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~---------~--- 257 (346)
+|+|||+|+++ +| .+++++||++.||+++. +
T Consensus 93 vm~DpDaP~~~---------------------------------~p----~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g 135 (220)
T 1wpx_B 93 VMTDPDAPSKT---------------------------------DH----KWSEFCHLVECDLKLLNEATHETSGATEFF 135 (220)
T ss_dssp EEEESSSSCSS---------------------------------CC----TTCSEEEEEEEEEEECC---------CCEE
T ss_pred EEECCCCCCCC---------------------------------CC----CcCcEEEEEEEccCCCccccccccCCCCcc
Confidence 99999999875 45 56789999999998652 1
Q ss_pred -----cCC-cccccccCCCCCCCCCCccEEEEEeeeCCCCCcCCCCCCCCCCCCCCCcC-------hHHHHHHhCCCCce
Q psy11040 258 -----HSG-KVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSNTSAEGRLGFS-------TQNFADKYKLGSPV 324 (346)
Q Consensus 258 -----~~~-~~~~~Y~~P~Pp~gsg~HRYvflLf~Q~~~~~~~~~~~~~~~~~~R~~F~-------~~~F~~~~~L~~pv 324 (346)
..+ ..+++|.||+||+|+|.|||+|+||+|+..+++.+ + ....+|.+|+ +++|++++|| .||
T Consensus 136 ~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya~~~~l~~~~--~--~~~~~R~~f~~~~~~f~~~~F~~~~~L-~pV 210 (220)
T 1wpx_B 136 ASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSK--F--SKIKDRPNWGYGTPATGVGKWAKENNL-QLV 210 (220)
T ss_dssp EEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECCTTCCGGG--S--CCCCCSBGGGCCSSSCSHHHHHHTTTC-EEE
T ss_pred ceEeecCCccccccccCCCCccCCCCceEEEEEEecCCcCCccc--c--CCcccccCCCccccchhHHHHHHHhCC-eEE
Confidence 124 67899999999999999999999999999877653 1 1245677777 9999999999 599
Q ss_pred EEEEEEEecC
Q psy11040 325 AGNFYLAQYD 334 (346)
Q Consensus 325 a~n~F~~~~d 334 (346)
|||||++|||
T Consensus 211 AanfF~~q~~ 220 (220)
T 1wpx_B 211 ASNFFYAETK 220 (220)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEEecC
Confidence 9999999996
No 7
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=99.67 E-value=1.2e-16 Score=140.86 Aligned_cols=94 Identities=28% Similarity=0.526 Sum_probs=76.0
Q ss_pred eecCCcccCcccccC---------CCeEEEecC--CCceeEEEeecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeec
Q psy11040 159 KVSLGNELTPTSVKD---------EPTVTWDAE--PAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQS 227 (346)
Q Consensus 159 ~v~~G~~l~~~~~~~---------~P~v~~~~~--~~~~ytl~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~ 227 (346)
.+..|..|.+..+.. .|.++|+.. ..+.|+|+|.|||+|++
T Consensus 9 ~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~---------------------------- 60 (166)
T 1fux_A 9 EIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG---------------------------- 60 (166)
T ss_dssp SCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT----------------------------
T ss_pred CcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC----------------------------
Confidence 467889998888766 899999874 45799999999999853
Q ss_pred CccccCCCCCCCCceeeEEEEEeecCCCC--ccCC-------------------cccccccCCCCCCCCCCccEEEEEee
Q psy11040 228 GYIDFTEPYSSNTVKGFLHWLVVNIQGSD--IHSG-------------------KVLAEYIGSGPPLGTGLHRYIFYVFK 286 (346)
Q Consensus 228 ~~~~~~~p~~~~~~~~~~hw~~~n~~~~~--~~~~-------------------~~~~~Y~~P~Pp~gsg~HRYvflLf~ 286 (346)
.+++||++.||+++. +..| +..+.|.||+||.|+|+|||+|+||+
T Consensus 61 --------------~~~~HW~v~nIp~~~~~l~~g~~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lya 126 (166)
T 1fux_A 61 --------------SGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWA 126 (166)
T ss_dssp --------------TCEEEEEEEEEETTCCEECTTTTCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEE
T ss_pred --------------CcEEEeEEeCcCCCcccccCCccccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeE
Confidence 258999999998652 2221 13789999999999999999999999
Q ss_pred eCC-CCCcC
Q psy11040 287 QTG-YIDFT 294 (346)
Q Consensus 287 Q~~-~~~~~ 294 (346)
|+. .+++.
T Consensus 127 ld~~~l~l~ 135 (166)
T 1fux_A 127 LKTEKIPVD 135 (166)
T ss_dssp ESCSCCCCC
T ss_pred eccccCCCC
Confidence 996 56653
No 8
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=99.57 E-value=7.7e-15 Score=128.32 Aligned_cols=80 Identities=31% Similarity=0.613 Sum_probs=63.7
Q ss_pred cCCCeEEEec--CCCceeEEEeecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEE
Q psy11040 172 KDEPTVTWDA--EPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLV 249 (346)
Q Consensus 172 ~~~P~v~~~~--~~~~~ytl~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~ 249 (346)
...|.++|+. +..+.|+|+|.|||+|++. +++||++
T Consensus 30 n~sP~l~w~~~P~~t~s~ali~~DPDAP~~~------------------------------------------~~~HW~v 67 (159)
T 1fjj_A 30 NISPHLAWDDVPAGTKSFVVTCYDPDAPTGS------------------------------------------GWWHWVV 67 (159)
T ss_dssp CCCCCEEEECCCTTCCEEEEEEEETTSTTTT------------------------------------------CEEEEEE
T ss_pred CcCCeEEEcCCCCCCeEEEEEEECCCCCCCC------------------------------------------cEEEEEE
Confidence 4578899987 4457999999999998532 5899999
Q ss_pred eecCCCC--ccCC------------------cccccccCCCCCCCCCCccEEEEEeeeCC-CCCcC
Q psy11040 250 VNIQGSD--IHSG------------------KVLAEYIGSGPPLGTGLHRYIFYVFKQTG-YIDFT 294 (346)
Q Consensus 250 ~n~~~~~--~~~~------------------~~~~~Y~~P~Pp~gsg~HRYvflLf~Q~~-~~~~~ 294 (346)
.||+++. +..| +..+.|.||+||.|+ .|||+|+||+|+. .+++.
T Consensus 68 ~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y~GP~PP~g~-~HRY~F~lyald~~~l~l~ 132 (159)
T 1fjj_A 68 VNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGE-THRYIFTVHALDIERIDVD 132 (159)
T ss_dssp EEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSCCCBCCSTTC-CEEEEEEEEEESSSCCSCC
T ss_pred EccCCCccccCCCcccccccCCCCcEEeecCCCCCcccCCCCcCCC-ceEEEEEEEEccCcccCCC
Confidence 9998652 2211 137899999999999 9999999999996 57653
No 9
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=99.53 E-value=1.3e-13 Score=119.78 Aligned_cols=119 Identities=20% Similarity=0.358 Sum_probs=82.4
Q ss_pred ecCCcccCcccc----cCCCeEEEecCC--CceeEEEeecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccC
Q psy11040 160 VSLGNELTPTSV----KDEPTVTWDAEP--AGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFT 233 (346)
Q Consensus 160 v~~G~~l~~~~~----~~~P~v~~~~~~--~~~ytl~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~ 233 (346)
+..|..|...-+ ...|.++|+..+ .+.|+|+|.|||+|++.
T Consensus 11 f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~--------------------------------- 57 (153)
T 3n08_A 11 FSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSV--------------------------------- 57 (153)
T ss_dssp BCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTT---------------------------------
T ss_pred cCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCcc---------------------------------
Confidence 344555544433 357889998743 57899999999999754
Q ss_pred CCCCCCCceeeEEEEEeecCCCC--ccCC-----------cccccccCCCCCCCCCCccEEEEEeeeCCCCCcCCCCCCC
Q psy11040 234 EPYSSNTVKGFLHWLVVNIQGSD--IHSG-----------KVLAEYIGSGPPLGTGLHRYIFYVFKQTGYIDFTEPYSSN 300 (346)
Q Consensus 234 ~p~~~~~~~~~~hw~~~n~~~~~--~~~~-----------~~~~~Y~~P~Pp~gsg~HRYvflLf~Q~~~~~~~~~~~~~ 300 (346)
++ .++++||++.||+++. +..| +....|.||+||.|+ |||+|+||+|...+++.+
T Consensus 58 ~~-----~~~~~HWvv~nIp~~~~~l~~g~~~g~~~g~n~~g~~~Y~GP~PP~g~--HrY~F~vyAld~~L~l~~----- 125 (153)
T 3n08_A 58 RE-----DGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGEIGYCPPCPPDAK--HRYYFYAYALDVVLSDEE----- 125 (153)
T ss_dssp CT-----TSCEEEEEEEEECTTCCEECTTCCCSSEECBCTTSSBSCCCCCCSSSC--EEEEEEEEEESSCCCCCS-----
T ss_pred CC-----CCcEEEEEEEcCCCCcccccCCCCCCceEeecCCCCccccCCcCcCCC--EEEEEEEEEECCcCCCCC-----
Confidence 22 3579999999999752 2222 246899999999987 999999999998766532
Q ss_pred CCCCCCCCcChHHHHHHhCCCCceEEEEEEE
Q psy11040 301 TSAEGRLGFSTQNFADKYKLGSPVAGNFYLA 331 (346)
Q Consensus 301 ~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~ 331 (346)
++...++.+...- ..+|-.-.+.
T Consensus 126 -------~~~~~~l~~a~~g-hvl~~a~l~g 148 (153)
T 3n08_A 126 -------GVTKEQLLEAMDG-HIIATAELMG 148 (153)
T ss_dssp -------SCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred -------CCCHHHHHHHhhh-CeEEEEEEEE
Confidence 4666666665543 2445444433
No 10
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}
Probab=99.37 E-value=1.8e-12 Score=117.77 Aligned_cols=117 Identities=23% Similarity=0.346 Sum_probs=78.8
Q ss_pred CcccCcc--cccCCCeEEEec-CCCceeEEEeecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCCCCC
Q psy11040 163 GNELTPT--SVKDEPTVTWDA-EPAGTYTLIMSGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSN 239 (346)
Q Consensus 163 G~~l~~~--~~~~~P~v~~~~-~~~~~ytl~m~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~ 239 (346)
|+-+++. .-...|.++|+. +..+.|+|+|.|||+|++.
T Consensus 47 G~~~sP~~~~p~~Sp~L~W~~~~gtks~aLvm~DPDAP~~~--------------------------------------- 87 (207)
T 2evv_A 47 PKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVC--------------------------------------- 87 (207)
T ss_dssp CGGGBCTTSCBCCCCCEEECCCTTCSEEEEEEEETTHHHHH---------------------------------------
T ss_pred CCCcCCccCCCCccceEEEecCCCCeEEEEEEECCCCCCCC---------------------------------------
Confidence 4444441 223346799965 4557999999999998643
Q ss_pred CceeeEEEEEeecCCCCccCC------------------ccc---------------ccccCCCCCCCCCCccEEEEEee
Q psy11040 240 TVKGFLHWLVVNIQGSDIHSG------------------KVL---------------AEYIGSGPPLGTGLHRYIFYVFK 286 (346)
Q Consensus 240 ~~~~~~hw~~~n~~~~~~~~~------------------~~~---------------~~Y~~P~Pp~gsg~HRYvflLf~ 286 (346)
.++|+||++.||+.+.+..| +.. +.|.||+||.| .|||+|.||+
T Consensus 88 -g~~~~HWvv~NI~~~~l~eg~~~~~~g~~qG~N~~~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G--~HRYvF~vyA 164 (207)
T 2evv_A 88 -GMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNG--DHHYLIQVYA 164 (207)
T ss_dssp -SSCEEEEEEEEECSSEECTTHHHHCSSSEECCCTTCSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSS--CEEEEEEEEE
T ss_pred -CCcEEEEEEeCCCCCccccCcccCCCCceecccccccccccccccccccccccccccccCCCCCCCC--cEEEEEEEEE
Confidence 35799999999964433211 111 78999999965 8999999999
Q ss_pred eCC-CCCcCCCCCCCCCCCCCCCcChHHHHHHhCCCCceEEEEEEEecC
Q psy11040 287 QTG-YIDFTEPYSSNTSAEGRLGFSTQNFADKYKLGSPVAGNFYLAQYD 334 (346)
Q Consensus 287 Q~~-~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~n~F~~~~d 334 (346)
|.. .+++. .+|...++.+...- -.+|-.-.+..+.
T Consensus 165 Ld~~~L~l~------------~~~~~~~l~~am~g-HvLa~a~l~g~y~ 200 (207)
T 2evv_A 165 LDIPKLALK------------APFFLGDLHDKMRN-HIIAIGRKEFLYK 200 (207)
T ss_dssp ESSSCCCCC------------SSCCHHHHHHHHTT-CEEEEEEEEEEEC
T ss_pred ecCccCCCC------------CCCCHHHHHHHhhc-CeEEEEEEEEEEe
Confidence 987 66543 25666776666553 3555555554443
No 11
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A
Probab=98.87 E-value=5.6e-10 Score=100.06 Aligned_cols=86 Identities=34% Similarity=0.564 Sum_probs=67.2
Q ss_pred eeEEEe----ecCcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCC------CCCCceeeEEEEEeecCCC
Q psy11040 186 TYTLIM----SGSDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPY------SSNTVKGFLHWLVVNIQGS 255 (346)
Q Consensus 186 ~ytl~m----~DpD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~------~~~~~~~~~hw~~~n~~~~ 255 (346)
.|++|| +..+.+.|.+++.|.+|.|++|+|.|||+|+||+|+..+++..+. .....++...|+..+..|.
T Consensus 86 ~~~HWlv~nIp~~~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~ 165 (190)
T 2iqy_A 86 EWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGA 165 (190)
T ss_dssp CEEEEEEEEEETTBGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHHTTCCS
T ss_pred CEEEEEEeCCChhccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHHhCCCC
Confidence 455555 445778899999999999999999999999999999988775421 1223456667777777888
Q ss_pred CccCCcccccccCCCC
Q psy11040 256 DIHSGKVLAEYIGSGP 271 (346)
Q Consensus 256 ~~~~~~~~~~Y~~P~P 271 (346)
+++++++.++|+..+|
T Consensus 166 pVA~~fF~~q~d~~v~ 181 (190)
T 2iqy_A 166 PVAGTCFQAEWDDSVP 181 (190)
T ss_dssp CSEEEEEEECCCTTHH
T ss_pred eeEEEEEEEEccCchH
Confidence 9999999999987553
No 12
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}
Probab=98.73 E-value=2.8e-09 Score=94.59 Aligned_cols=75 Identities=32% Similarity=0.520 Sum_probs=60.2
Q ss_pred cCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCC------CCCCceeeEEEEEeecCCCCccCCcccccccC
Q psy11040 195 DIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPY------SSNTVKGFLHWLVVNIQGSDIHSGKVLAEYIG 268 (346)
Q Consensus 195 D~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~------~~~~~~~~~hw~~~n~~~~~~~~~~~~~~Y~~ 268 (346)
+.+.|.+++.|.+|.|+.|+|.|||+|+||+|+..++ ..+. .....++...|+..+..+.+++++++.++|+.
T Consensus 90 ~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA~~~F~~q~d~ 168 (179)
T 2jyz_A 90 NPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYDD 168 (179)
T ss_dssp STTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSEEEEEEECCCT
T ss_pred ccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCC-chhhccCCCcccCCCcCHHHHHHHhCCCCccEEEEEEEEecC
Confidence 6788999999999999999999999999999998776 2211 12234566777777878889999999999986
Q ss_pred CC
Q psy11040 269 SG 270 (346)
Q Consensus 269 P~ 270 (346)
.+
T Consensus 169 ~v 170 (179)
T 2jyz_A 169 YV 170 (179)
T ss_dssp HH
T ss_pred ch
Confidence 44
No 13
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A
Probab=98.61 E-value=1.4e-08 Score=89.32 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=63.5
Q ss_pred eeEEEee----c-CcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCccCC
Q psy11040 186 TYTLIMS----G-SDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSG 260 (346)
Q Consensus 186 ~ytl~m~----D-pD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~ 260 (346)
.|++|++ . .+...|++++.|.+|.|+ +|.|||+|+||+|+..+++..| .....++...|+..+..+.+++++
T Consensus 86 ~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRY~f~ly~q~~~l~~~~p-~~R~~F~~~~F~~~~~Lg~Pva~~ 162 (170)
T 3axy_A 86 EYLHWLVTDIPGTTAASFGQEVMSYESPRPT--MGIHRLVFVLFQQLGRQTVYAP-GWRQNFNTKDFAELYNLGSPVAAV 162 (170)
T ss_dssp SEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEEEEECSSCCCCCCC-SCSTTCCHHHHHHHTTCCSCSEEE
T ss_pred cEEEEEEeCCCCCccccCCceeceecCCCCC--CCcEEEEEEEEecCCccCCCCc-cccCCcCHHHHHHHhCCCCcEEEE
Confidence 5666663 2 244568889999999999 6799999999999998888655 333456778888888888899999
Q ss_pred cccccccC
Q psy11040 261 KVLAEYIG 268 (346)
Q Consensus 261 ~~~~~Y~~ 268 (346)
++.++|++
T Consensus 163 fF~~q~d~ 170 (170)
T 3axy_A 163 YFNSQREA 170 (170)
T ss_dssp EEEECCCC
T ss_pred EEEEEecC
Confidence 99999863
No 14
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A
Probab=98.47 E-value=4.8e-08 Score=86.74 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=61.9
Q ss_pred eeEEEee----c-CcCCCceeEeeccCCCCCCCCCcceEEEEEEeecCccccCCCCCCCCceeeEEEEEeecCCCCccCC
Q psy11040 186 TYTLIMS----G-SDIHSGKVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTEPYSSNTVKGFLHWLVVNIQGSDIHSG 260 (346)
Q Consensus 186 ~ytl~m~----D-pD~p~~~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~p~~~~~~~~~~hw~~~n~~~~~~~~~ 260 (346)
.|++||+ . .+...|..++.|.+|.|+ +|.|||+|+||+|+..+++.........++...|...+..+.|++++
T Consensus 90 ~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa~~ 167 (180)
T 1wko_A 90 EHLHWIVTNIPGTTDATFGKEVVSYELPRPS--IGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAV 167 (180)
T ss_dssp CEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEEEE
T ss_pred cEEEEEEeccCcCccccCCceeeeeCCCCCC--CCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEEEE
Confidence 5666663 2 234568899999999996 78999999999999988875412333456777788888888899999
Q ss_pred cccccccC
Q psy11040 261 KVLAEYIG 268 (346)
Q Consensus 261 ~~~~~Y~~ 268 (346)
++.++|+.
T Consensus 168 fF~~q~d~ 175 (180)
T 1wko_A 168 FFNAQRET 175 (180)
T ss_dssp EEEECCC-
T ss_pred EEEEEECC
Confidence 99999975
No 15
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1
Probab=98.11 E-value=4.5e-07 Score=82.76 Aligned_cols=67 Identities=31% Similarity=0.503 Sum_probs=47.1
Q ss_pred eeEeeccCCCCCCCCCcceEEEEEEeecCccccCC--CCCCCCcee-------eEEEEEeecCCCCccCCccccccc
Q psy11040 200 KVLAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFTE--PYSSNTVKG-------FLHWLVVNIQGSDIHSGKVLAEYI 267 (346)
Q Consensus 200 ~~~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~~--p~~~~~~~~-------~~hw~~~n~~~~~~~~~~~~~~Y~ 267 (346)
..++.|.||.|+.|+|.|||+|+||+|+..+++.. .......++ ...|+..+.. .+++++++.++|.
T Consensus 145 ~~~~~Y~gP~Pp~g~g~HRY~f~lya~~~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L-~pVAanfF~~q~~ 220 (220)
T 1wpx_B 145 NTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNL-QLVASNFFYAETK 220 (220)
T ss_dssp EEEECCCCCCCCTTSCCEEEEEEEEECCTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTC-EEEEEEEEEECCC
T ss_pred cccccccCCCCccCCCCceEEEEEEecCCcCCccccCCcccccCCCccccchhHHHHHHHhCC-eEEEEEEEEEecC
Confidence 67999999999999999999999999998877532 111111223 4445555544 4677777777763
No 16
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=98.04 E-value=3.7e-06 Score=75.76 Aligned_cols=105 Identities=18% Similarity=0.252 Sum_probs=61.9
Q ss_pred HHHhhhcccccccchhhcc--ceeEEEEeCCCeeecCCcccCccc-cc--CCC--eEEE-----ecCC-------CceeE
Q psy11040 128 LARRIKSEQESVRDLLELQ--GALQMIVYPNNSKVSLGNELTPTS-VK--DEP--TVTW-----DAEP-------AGTYT 188 (346)
Q Consensus 128 L~~kvf~e~~IiPDVl~~~--~~~L~V~y~n~~~v~~G~~l~~~~-~~--~~P--~v~~-----~~~~-------~~~yt 188 (346)
+.-+++.+..+.|.+.-.. .....|.-| ..+.+-+....+. ++ ..| +-++ +.+. .+.|+
T Consensus 23 IipDvl~~~~f~p~~~L~V~y~~~~~v~~G--~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~~~~~~~~~~ 100 (200)
T 2gzq_A 23 IIPHVFPDENVDLTVDMYISFKSGKEVNHG--NILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPSRRRPDGRDYV 100 (200)
T ss_dssp HHHHTSSSSCCCCCCCEEEEEETTEEECSS--CEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSCSSCCTTCSEE
T ss_pred ccCcccCCCCCcceeEEEEEECCCcccCCC--CEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCCCCCCCCCCEE
Confidence 4445554444444432222 212345444 4777777765555 33 223 2333 2221 13566
Q ss_pred EEee----cCcCCCce-----eEeeccCCCCCCCCCcceEEEEEE--eecCccccCC
Q psy11040 189 LIMS----GSDIHSGK-----VLAEYIGSGPPLGTGLHRYIFYVF--KQSGYIDFTE 234 (346)
Q Consensus 189 l~m~----DpD~p~~~-----~~~~Y~~p~p~~gtg~hr~vfll~--~q~~~~~~~~ 234 (346)
+||+ ..+.+.+. .++.|.+|.|++|+|+|||+|+|| +|+..+++..
T Consensus 101 HWlv~nIp~~~~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~ 157 (200)
T 2gzq_A 101 HWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTG 157 (200)
T ss_dssp EEEEEEECSSEEETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTT
T ss_pred EEEEeCCCcCcccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccc
Confidence 6653 23333444 799999999999999999999985 9998877644
No 17
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=97.28 E-value=0.00013 Score=63.84 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=29.0
Q ss_pred EeeccCCCCCCCCCcceEEEEEEeecC-ccccC
Q psy11040 202 LAEYIGSGPPLGTGLHRYIFYVFKQSG-YIDFT 233 (346)
Q Consensus 202 ~~~Y~~p~p~~gtg~hr~vfll~~q~~-~~~~~ 233 (346)
.+.|.+|.|+.|+|.|||+|+||+|+. .+++.
T Consensus 103 ~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~ 135 (166)
T 1fux_A 103 YAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD 135 (166)
T ss_dssp SSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC
T ss_pred CccccCCCCcCCCCcEEEEEEEeEeccccCCCC
Confidence 678999999999999999999999997 57764
No 18
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=96.67 E-value=0.0012 Score=57.28 Aligned_cols=31 Identities=42% Similarity=0.647 Sum_probs=27.9
Q ss_pred EeeccCCCCCCCCCcceEEEEEEeecC-ccccC
Q psy11040 202 LAEYIGSGPPLGTGLHRYIFYVFKQSG-YIDFT 233 (346)
Q Consensus 202 ~~~Y~~p~p~~gtg~hr~vfll~~q~~-~~~~~ 233 (346)
.+.|.||.|+.|+ .|||+|+||+|+. .+++.
T Consensus 101 ~~~Y~GP~PP~g~-~HRY~F~lyald~~~l~l~ 132 (159)
T 1fjj_A 101 KTGYDGAAPPKGE-THRYIFTVHALDIERIDVD 132 (159)
T ss_dssp SBSCCCBCCSTTC-CEEEEEEEEEESSSCCSCC
T ss_pred CCcccCCCCcCCC-ceEEEEEEEEccCcccCCC
Confidence 6889999999999 9999999999997 57764
No 19
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=96.15 E-value=0.0036 Score=53.88 Aligned_cols=30 Identities=27% Similarity=0.462 Sum_probs=26.8
Q ss_pred EeeccCCCCCCCCCcceEEEEEEeecCccccC
Q psy11040 202 LAEYIGSGPPLGTGLHRYIFYVFKQSGYIDFT 233 (346)
Q Consensus 202 ~~~Y~~p~p~~gtg~hr~vfll~~q~~~~~~~ 233 (346)
...|.||.|+.|+ |||+|.||+|...+++.
T Consensus 95 ~~~Y~GP~PP~g~--HrY~F~vyAld~~L~l~ 124 (153)
T 3n08_A 95 EIGYCPPCPPDAK--HRYYFYAYALDVVLSDE 124 (153)
T ss_dssp SBSCCCCCCSSSC--EEEEEEEEEESSCCCCC
T ss_pred CccccCCcCcCCC--EEEEEEEEEECCcCCCC
Confidence 4789999999998 99999999999877764
No 20
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}
Probab=95.05 E-value=0.015 Score=52.44 Aligned_cols=30 Identities=30% Similarity=0.565 Sum_probs=26.0
Q ss_pred eeccCCCCCCCCCcceEEEEEEeecC-ccccCC
Q psy11040 203 AEYIGSGPPLGTGLHRYIFYVFKQSG-YIDFTE 234 (346)
Q Consensus 203 ~~Y~~p~p~~gtg~hr~vfll~~q~~-~~~~~~ 234 (346)
+.|.||.|+.| .|||+|.||+|.. .+++..
T Consensus 144 ~~Y~GP~PP~G--~HRYvF~vyALd~~~L~l~~ 174 (207)
T 2evv_A 144 SVYIGPMPPNG--DHHYLIQVYALDIPKLALKA 174 (207)
T ss_dssp CSCCCCCCSSS--CEEEEEEEEEESSSCCCCCS
T ss_pred cccCCCCCCCC--cEEEEEEEEEecCccCCCCC
Confidence 78999999975 8999999999997 777643
No 21
>3kxy_T EXSE; type-three secretion system, TTSS, T3SS, chaperone-effector chaperone, effector, chaperone-transcription inhibitor COMP; 2.80A {Pseudomonas aeruginosa}
Probab=69.68 E-value=2 Score=30.20 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=31.9
Q ss_pred hhhhhhhhcCCchhhHHHHHHHHHhcc-CCCchhHHHhh
Q psy11040 61 RKGLHRAVIGLDEKFTKKLVAFIAKHI-DVPQYFDVLSQ 98 (346)
Q Consensus 61 R~~L~~AL~gRde~~l~piL~fl~k~i-~dpr~~~~L~~ 98 (346)
|+.-+.|+.|-|..++.-+-+||.+|+ .|||.-..|-+
T Consensus 11 rsvtraavrgedrssvaglarwlarnvagdprseqalqr 49 (66)
T 3kxy_T 11 RSVTRAAVRGEDRSSVAGLARWLARNVAGDPRSEQALQR 49 (66)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHTCCCTTHHHHHHH
T ss_pred chhhHHHHhccchhhHHHHHHHHHHhccCCccHHHHHHH
Confidence 556678999999999999999999997 89998655443
No 22
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=21.55 E-value=32 Score=21.16 Aligned_cols=11 Identities=18% Similarity=-0.015 Sum_probs=9.3
Q ss_pred HHHHHhhhhhh
Q psy11040 55 STYKQQRKGLH 65 (346)
Q Consensus 55 ~~eL~~R~~L~ 65 (346)
.+||++||.|.
T Consensus 18 reelikrgvlk 28 (32)
T 4b1v_M 18 REELIKRGVLK 28 (32)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHHHhhhhh
Confidence 38999999876
Done!