Query psy11046
Match_columns 550
No_of_seqs 141 out of 196
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 16:43:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g9h_A Suppressor of yeast pro 100.0 1.3E-62 4.6E-67 503.3 30.5 238 279-549 66-326 (328)
2 1i31_A Clathrin coat assembly 99.1 7.9E-09 2.7E-13 105.4 24.6 242 280-549 49-312 (314)
3 4en2_M AP-1 complex subunit MU 99.1 2.8E-09 9.5E-14 106.7 20.2 235 282-549 13-263 (266)
4 3l81_A AP-4 complex subunit MU 99.1 3.8E-08 1.3E-12 100.2 26.2 238 280-549 32-299 (301)
5 2vgl_M AP-2 complex subunit MU 99.1 2.4E-08 8.2E-13 105.7 25.1 242 281-549 171-433 (435)
6 1w63_M Adaptor-related protein 99.1 8.4E-09 2.9E-13 108.8 21.4 230 280-549 168-420 (423)
7 3ml6_A Chimeric complex betwee 99.0 5E-08 1.7E-12 102.5 24.2 228 281-549 121-383 (385)
8 4hpq_A ATG31, KLTH0C07942P; au 29.5 4.6 0.00016 32.9 -2.3 37 445-481 4-41 (69)
9 2xzz_A Protein-glutamine gamma 25.7 2.1E+02 0.0073 24.2 7.4 58 440-518 32-89 (102)
10 2h0e_A Transthyretin-like prot 11.5 1.6E+02 0.0055 26.1 3.3 52 365-417 62-113 (121)
No 1
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor, endocytosis, phosphoprotein; HET: 1PG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-62 Score=503.28 Aligned_cols=238 Identities=21% Similarity=0.346 Sum_probs=210.8
Q ss_pred CCcceeEEEEEEEEEEEeCCcceeeeEEEEEEEEEeecCCccccccCCCCCcceEEEEcCCccccccccCcccccccccc
Q psy11046 279 DTIPLAVAFHEIIHSYFRGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEENK 358 (550)
Q Consensus 279 d~~pLaaSI~EtVNA~Fkgg~~skc~VkVtGElaLSFpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~PN~~~I~~~~~~ 358 (550)
...||||||+|+||||||||+++||+ |+|||+|+|++++ +++++.++.++|||+|+++||||+||++||+...
T Consensus 66 ~~pGLnASI~E~VNA~Fkgg~~tk~~--v~GEiaLsy~~~~---~s~~p~p~~l~fRL~N~~~Lekv~pN~~fv~~~~-- 138 (328)
T 3g9h_A 66 SQFGLNASIAEVLNASFKDGMLQNSQ--LIGEIALNYLPNS---VMNSPLPIGINLRINNGAKFEKVILNQAFIERVA-- 138 (328)
T ss_dssp -CCEEEEEEEEEEEEEEETTEEEEEE--EEEEEEEEEECCS---SSCCCCCSEEEEEEETGGGEEEEEECTTTEEEEE--
T ss_pred CCCceeEEEEEEEEEEEECCcEEEEE--EEEEEEEecCCCc---cccCCCCccEEEEecCcchhheeeCCHHHhccCC--
Confidence 46799999999999999999999985 9999999999987 4567788999999999999999999999998532
Q ss_pred cCCCCCCccEEEechhHHHHHHHhhccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEEEEEeCCCCC
Q psy11046 359 LDKSSDSMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNHAM 438 (550)
Q Consensus 359 sqs~~~~~~F~~nm~~L~s~L~k~aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~IdYk~Np~~~ 438 (550)
+++|||||++|++ ..+++|||||+. ++|||+|+++||||++||+|+|+|+|||+++
T Consensus 139 ------~~eF~vn~~~L~s--------------ktv~~lKYqVs~----~~~PL~l~p~WK~E~~qtsliI~Yk~NP~~~ 194 (328)
T 3g9h_A 139 ------PEEFKVNPSFIDS--------------RTLGAIKYSIKE----PIAPIVIHPVWRFESHQASVVLTVKMSPSLP 194 (328)
T ss_dssp ------TTEEEECTTTTBT--------------CEEEEEEEEEES----CCCSEEEEEEEEECSSEEEEEEEEEECTTSC
T ss_pred ------CCCEEEchHHhcc--------------cceeeEEEEECC----CCCCeEEEeeeecCCCeeEEEEEEEECCCCc
Confidence 4799999999852 248999999974 7999999999999999999999999999865
Q ss_pred C--CCcceeeEEEEEeeCC-CeeeeeecCcccccCCCceeeEecCC-ccCCCCCCCceeEEEEEeccCCCCCcCe--EEE
Q psy11046 439 G--SPSPLLNVVLAVPVDG-EVTNVQAKPNVQWLPETNRAIWKFTD-LSQHSENHGIGCVKARFELKNGPGTPST--IAT 512 (550)
Q Consensus 439 ~--~~~~L~NV~v~vpvdg-~vT~aqSkP~gtwn~e~~ri~Wklpe-Ls~~se~~g~G~L~ARF~~t~G~~~Ps~--Vav 512 (550)
. .+.+|+||+|+|+||| .||+||+||+|+||+|++||+|||+| |+++. +++.|+|+|||++ +|++.|.+ |+|
T Consensus 195 ~~~~~~~L~Nv~~~V~ldGa~ats~qskP~gtwn~e~~ri~Wkl~e~l~l~~-~g~~gkLiARf~~-~g~~~~~~~gV~a 272 (328)
T 3g9h_A 195 DEISQIVIEDLVVFVNIDGANATSALSKPQGSFSKEKKRITWRFKEPVVLTR-NGEGQRLIARFIT-DGLAHESAKGVIT 272 (328)
T ss_dssp TTCCEEEEEEEEEEEEBCSSCEEEEEESSSCCBCSSSCEEEEECSSCEEEET-TCCCEEEEEEEEE-SSCCCBCSSCEEE
T ss_pred CcCCCceeeeEEEEEEeCCCceeEEEecCCceeccccCEEEEECCCCccccc-CCCCCeEEEEEEc-CCCCCCCCCcEEE
Confidence 4 3679999999999999 69999999999999999999999999 66654 2235999999998 89987766 999
Q ss_pred EEEEcCCC---------cCCceEEE--------ccCceeEeeeeEEeeeeeeee
Q psy11046 513 QFNCEGTT---------LSGAEFEL--------IGPGYRVSLVKRKFMSGKLVL 549 (550)
Q Consensus 513 qF~~egst---------lSGv~iel--------~gsgyr~slvkrrf~sGkYi~ 549 (550)
||.|+|.+ +|||.|+. +++.|..+.+.||+++|||++
T Consensus 273 kF~~~~~~~~~~~~~~~gsgi~i~~~~~~~~dPF~~~W~~v~~~r~l~~G~Y~~ 326 (328)
T 3g9h_A 273 KFTISETDNVALPHSGAGSGITLTCQELDENNPFGGEWLDVNTKRTLTTGNYHG 326 (328)
T ss_dssp EEEECCCSCSSCTTTTCSCCCEEEEEEESSSCTTCCCCEECEEEEEEEEEEEEE
T ss_pred EEEEeCCCcccccccccCCceeEEecccccCCCCcCcccccceEEEEeeeEEEe
Confidence 99999874 78998873 334699999999999999986
No 2
>1i31_A Clathrin coat assembly protein AP50; beta-sandwich, peptide-binding site, protein-peptide complex, clathrin adaptor; 2.50A {Rattus norvegicus} SCOP: b.2.7.1 PDB: 1bw8_A 2pr9_A 3h85_A 1bxx_A 1hes_A 1h6e_A
Probab=99.15 E-value=7.9e-09 Score=105.43 Aligned_cols=242 Identities=16% Similarity=0.207 Sum_probs=141.9
Q ss_pred CcceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEe-ecCCccccccCCCCCcceEEEEcCCccccccccCccccccccc
Q psy11046 280 TIPLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLS-FPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEEN 357 (550)
Q Consensus 280 ~~pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLS-Fpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~PN~~~I~~~~~ 357 (550)
.=.|-.-|+|.|||.+ ++|.+.++. |.|+|.|- |- .. -+.+.|.|++.-.|++-............
T Consensus 49 ~NEi~vdV~E~v~~~i~~~G~v~~~e--V~G~I~~~~~L-------sG---~P~l~l~Ln~~~~~~~~~~~~~~~~~~~~ 116 (314)
T 1i31_A 49 RNELFLDVLESVNLLMSPQGQVLSAH--VSGRVVMKSYL-------SG---MPECKFGMNDKIVIEKQGKGTADETSKSG 116 (314)
T ss_dssp SCEEEEEEEEEEEEEECSSCCEEEEE--EEEEEEEEEEC-------SS---SCEEEEEESCCC-----------------
T ss_pred cceEEEEEEEEEEEEECCCCCEEEEE--EEEEEEEEEEc-------CC---CCeEEEEECCchhcccccccccccccccc
Confidence 3457788999999999 577777764 99999882 22 12 24677888764333211000000000000
Q ss_pred ccCCCCCCccEEEechh-HHHHHHHh--hccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEEEEEeC
Q psy11046 358 KLDKSSDSMTCEFNMSA-LSSLLRKQ--CEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYN 434 (550)
Q Consensus 358 ~sqs~~~~~~F~~nm~~-L~s~L~k~--aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~IdYk~N 434 (550)
+.....+ ++.|-.-. |..|-+.. .=--|. -+..+|+|++... ...||.+.+..+ +.+.. +|+|.+.
T Consensus 117 ~~~~~l~--d~~FHpcV~l~~f~~~r~IsFiPPD---G~F~Lm~Yr~~~~---~~lP~~v~~~~~-~~g~~--~iE~~l~ 185 (314)
T 1i31_A 117 KQSIAID--DCTFHQCVRLSKFDSERSISFIPPD---GEFELMRYRTTKD---IILPFRVIPLVR-EVGRT--KLEVKVV 185 (314)
T ss_dssp CCCCCCS--EEEECTTSBCC----CCCEEECCCS---EEEEEEEEEECSS---CCCCEEEEEEEE-EETTT--EEEEEEE
T ss_pred CCceEcc--cccccccccHHHcCCcceEEEECCC---CCeEEEEEEecCC---cCCCEEEEEEEE-ecCCc--EEEEEEE
Confidence 0000000 12221100 00000000 000122 2346999999862 468999987665 43333 4555554
Q ss_pred CCC-CCCCcceeeEEEEEeeCCCeeeeeecCc---ccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCC-C---C
Q psy11046 435 NHA-MGSPSPLLNVVLAVPVDGEVTNVQAKPN---VQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGP-G---T 506 (550)
Q Consensus 435 p~~-~~~~~~L~NV~v~vpvdg~vT~aqSkP~---gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~-~---~ 506 (550)
..+ +.....++||+|.+|+-..+.++...+. +.|..+++.+.|+|+.+.... ...|.|.|++.... . .
T Consensus 186 ~~~~~~~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~~y~~~~~~l~W~I~~i~g~~----e~~l~~~~~l~s~~~~~~~~ 261 (314)
T 1i31_A 186 IKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMK----ESQISAEIELLPTNDKKKWA 261 (314)
T ss_dssp EEECSCTTCEEEEEEEEEECCTTEEEEEEECSSSEEEEEGGGTEEEEEEEEEESSE----EEEEEEEEEECCCCSSSCCC
T ss_pred EccCCCCcceeeEEEEEEECCCCcccceEEecCceEEEecCCCEEEEEeCcCCCCC----cEEEEEEEEecCCCcCCccC
Confidence 311 1234579999999999777777777764 478899999999999886432 35799999986432 1 2
Q ss_pred cCeEEEEEEEcCCCcCCceEEE---cc-----CceeE-eeeeEEeeeeeeee
Q psy11046 507 PSTIATQFNCEGTTLSGAEFEL---IG-----PGYRV-SLVKRKFMSGKLVL 549 (550)
Q Consensus 507 Ps~VavqF~~egstlSGv~iel---~g-----sgyr~-slvkrrf~sGkYi~ 549 (550)
..+|.|+|.+. .+.|||.|+- .+ ++|+. .-||.-..+|.|.+
T Consensus 262 ~~pi~v~F~ip-~t~Sgl~V~~l~v~e~~~~~~~y~~~kwVrYit~sg~y~~ 312 (314)
T 1i31_A 262 RPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYET 312 (314)
T ss_dssp CCCEEEEEEES-SCTTCCCEEEEEEECSSSSCCGGGCEEEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEe-ecccCcEEEEEEEeccccccCCCCccCceEEEEeCCeEEE
Confidence 45699999999 9999999973 23 36643 45666677899975
No 3
>4en2_M AP-1 complex subunit MU-1; human immunodeficiency virus 1, HIV, NEF, antigen presentation, HOST defense, adaptor protein complex 1, MU1 subunit; 2.58A {Mus musculus} PDB: 4emz_A
Probab=99.14 E-value=2.8e-09 Score=106.69 Aligned_cols=235 Identities=16% Similarity=0.277 Sum_probs=142.0
Q ss_pred ceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEeecCCccccccCCCCCcceEEEEcCCccccccccCcccccccccccC
Q psy11046 282 PLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEENKLD 360 (550)
Q Consensus 282 pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLSFpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~PN~~~I~~~~~~sq 360 (550)
.|-.-|+|.||+.+ ++|.+.++ -|.|+|.+- ++ ...-+.+.|.|++-..++...-+. . ..
T Consensus 13 ei~vdV~E~v~~~~~~~G~v~~~--~v~G~i~~~-------~~--lsG~p~~~l~ln~~~~~~~~~~~~------~--~~ 73 (266)
T 4en2_M 13 EVFLDVIEAVNLLVSANGNVLRS--EIVGSIKMR-------VF--LSGMPELRLGLNDKVLFDNTGRGK------S--KS 73 (266)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEE--EEEEEEEEE-------EE--CCSCCEEEEEECBHHHHHHTTCTT------S--CC
T ss_pred eEEEEEEEEEEEEECCCCCEEEE--EEEEEEEEE-------EE--CCCCCEEEEEEcCccccccccccc------c--Cc
Confidence 56778999999999 57777775 499999972 11 112246778886533222111000 0 00
Q ss_pred CCCCCccEEEechh-HHHHHHHh--hccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEEEEEeCCCC
Q psy11046 361 KSSDSMTCEFNMSA-LSSLLRKQ--CEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNHA 437 (550)
Q Consensus 361 s~~~~~~F~~nm~~-L~s~L~k~--aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~IdYk~Np~~ 437 (550)
... .++.|-.-. +..|-... .=--|.. ...+|+|++... ...||.+. .|.-+..+..+.+.+++...+
T Consensus 74 ~~l--~d~~fH~cV~~~~f~~~r~i~f~PPdg---~F~Lm~yr~~~~---~~~Pi~i~-~~~~~~~~~~vei~v~~k~~~ 144 (266)
T 4en2_M 74 VEL--EDVKFHQCVRLSRFENDRTISFIPPDG---EFELMSYRLNTH---VKPLIWIE-SVIEKHSHSRIEYMVKAKSQF 144 (266)
T ss_dssp BCC--EEEEECTTBCHHHHHHHCCCEECCCSE---EEEEEEEEECCC---CCCSEEEE-EEEEEEETTEEEEEEEEEECB
T ss_pred cCc--cccccccccCHhHccccceEEEeCCCC---ceEEEEEEecCC---CCCCEEEE-EEEecCCCEEEEEEEEEecCC
Confidence 001 122221110 11111100 0012232 346999999853 24666655 566555555555555553322
Q ss_pred CCCCcceeeEEEEEeeCCCeeeeeecCc---ccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCC----CCcCeE
Q psy11046 438 MGSPSPLLNVVLAVPVDGEVTNVQAKPN---VQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGP----GTPSTI 510 (550)
Q Consensus 438 ~~~~~~L~NV~v~vpvdg~vT~aqSkP~---gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~----~~Ps~V 510 (550)
. ....++||.|.+|+-..+.++..+.. +.|..+++.+.|+|+.+....| -.|.|.|.+.... ..-.+|
T Consensus 145 ~-~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~~y~~~~~~lvW~I~~~~g~~e----~~l~~~~~l~s~~~~~~~~~~pI 219 (266)
T 4en2_M 145 K-RRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKE----YLMRAHFGLPSVEAEDKEGKPPI 219 (266)
T ss_dssp C-TTCEEEEEEEEEECCTTCEEEEEEESSSEEEEETTTTEEEEEEEEEESSCE----EEEEEEEEC----------CCCE
T ss_pred C-CCcEEEEEEEEECCCCCcCcceEEecCceEEEeccCCEEEEEEeeECCCcc----eEEEEEEEeCCCCCCCcccCCcE
Confidence 2 34689999999999766666666643 5678999999999998864332 4699999885321 122469
Q ss_pred EEEEEEcCCCcCCceEEEc---c-Ccee-EeeeeEEeeeeeeee
Q psy11046 511 ATQFNCEGTTLSGAEFELI---G-PGYR-VSLVKRKFMSGKLVL 549 (550)
Q Consensus 511 avqF~~egstlSGv~iel~---g-sgyr-~slvkrrf~sGkYi~ 549 (550)
.|+|.+...++|||.|.-. + .+|+ +.-||....+|.|.+
T Consensus 220 ~v~F~ip~~t~SGl~V~~L~v~e~~~y~~~kwVrY~T~sg~y~~ 263 (266)
T 4en2_M 220 SVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQL 263 (266)
T ss_dssp EEEEEEESEESSCCCEEEEEEECSSCCCEEEEEEEEEECSSEEE
T ss_pred EEEEEeCCceeCCcEEEEEEeeccCCCCCCCCEEEEEeCCCEEE
Confidence 9999999999999999732 2 4676 556888888999975
No 4
>3l81_A AP-4 complex subunit MU-1; immunoglobulin-like beta-sandwich, coated PIT, golgi apparat membrane, phosphoprotein, protein transport, transport; 1.60A {Homo sapiens}
Probab=99.08 E-value=3.8e-08 Score=100.20 Aligned_cols=238 Identities=16% Similarity=0.199 Sum_probs=139.8
Q ss_pred CcceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEeecCCccccccCCCCCcceEEEEcCCccccccc----cCcccccc
Q psy11046 280 TIPLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENML----PNKQLINI 354 (550)
Q Consensus 280 ~~pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLSFpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~----PN~~~I~~ 354 (550)
.=.|-.-|+|.||+.+ ++|.+.++ -|.|+|.+- ++ ...-+.+.|.|+..-.+++-. .|...+
T Consensus 32 knEi~vdV~E~v~~~~~~~G~v~~~--eV~G~I~~~-------~~--LsG~P~~~l~Lnd~~~~~~~~~~~~~~~~~l-- 98 (301)
T 3l81_A 32 KNEVFLDVVERLSVLIASNGSLLKV--DVQGEIRLK-------SF--LPSGSEMRIGLTEEFSVGKSELRGYGPGIRV-- 98 (301)
T ss_dssp -CEEEEEEEEEEEEEECTTSCEEEE--EEEEEEEEE-------EC--CCTTCEEEEEECSSCEESCCTTTCCCSSSEE--
T ss_pred cceEEEEEEEEEEEEECCCCCEEEE--EEEEEEEEE-------Ee--CCCCCeEEEEEcccccccccccccccCceEc--
Confidence 4567889999999999 57887775 499999982 11 112246777776432221100 000000
Q ss_pred cccccCCCCCCccEEE--echhHHHHHHHhhccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEEEEE
Q psy11046 355 EENKLDKSSDSMTCEF--NMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYK 432 (550)
Q Consensus 355 ~~~~sqs~~~~~~F~~--nm~~L~s~L~k~aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~IdYk 432 (550)
+.-.|+= +.+....- +...=--|.. ...+|+|++.. ......||.+.+.......++.|-+.++
T Consensus 99 ---------~d~~fH~cV~~~~f~~~-r~IsFiPPDg---~F~Lm~Yr~~~-~~~~~~P~~v~~~v~~~~~~~~ie~~l~ 164 (301)
T 3l81_A 99 ---------DEVSFHSSVNLDEFESH-RILRLQPPQG---ELTVMRYQLSD-DLPSPLPFRLFPSVQWDRGSGRLQVYLK 164 (301)
T ss_dssp ---------SEEEEETTCBCTTHHHH-CEEEECCCSE---EEEEEEEEECS-CCSSCCSEEEEEEEEECTTTSEEEEEEE
T ss_pred ---------cccccccccChhHcccc-ceEEecCCCC---eeEEEEEEecC-CCccCCCEEEEEEEEECCCcEEEEEEEE
Confidence 0011110 11110000 0000012222 34689999986 3334689999865555444455555555
Q ss_pred eCCCCCCCCcceeeEEEEEeeCCCeeeee--ecC-cccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCCC----
Q psy11046 433 YNNHAMGSPSPLLNVVLAVPVDGEVTNVQ--AKP-NVQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGPG---- 505 (550)
Q Consensus 433 ~Np~~~~~~~~L~NV~v~vpvdg~vT~aq--SkP-~gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~~---- 505 (550)
+...+. ....++||.|.+|+-..+.+++ .+. .|+|.=+++.|.|+|+.+.-.. .-++.|.|.+.....
T Consensus 165 l~~~f~-~~~~~~nV~I~IPvP~~~~~~~~~~~~~~G~~~y~~~~lvW~I~~~~g~~----~~s~~~~~~l~~~~~~~~~ 239 (301)
T 3l81_A 165 LRCDLL-SKSQALNVRLHLPLPRGVVSLSQELSSPEQKAELAEGALRWDLPRVQGGS----QLSGLFQMDVPGPPGPPSH 239 (301)
T ss_dssp EEECSC-TTCEEEEEEEEEECCTTCEEEEEEESSTTCEEEEETTEEEEEECCEETTC----EEEEEEEEECCCCCC----
T ss_pred EecCCC-CCcEEEEEEEEEcCCCCcccceEEEeecCceEEEeCcEEEEEEeeECCCc----EEeEEEEEEecCCcccccc
Confidence 444333 2468999999999977776666 443 3554338999999999886432 246777776642111
Q ss_pred ---------CcCeEEEEEEEcCCCcCCceEEE---ccC---cee-EeeeeEEeeeeeeee
Q psy11046 506 ---------TPSTIATQFNCEGTTLSGAEFEL---IGP---GYR-VSLVKRKFMSGKLVL 549 (550)
Q Consensus 506 ---------~Ps~VavqF~~egstlSGv~iel---~gs---gyr-~slvkrrf~sGkYi~ 549 (550)
.-.+|.|+|.+...++||+.|.- .+. +|+ +.-||.-..+|.|.+
T Consensus 240 ~~~~~~~~~~~~PI~v~F~ip~~t~SGl~Vr~L~v~e~~~~~y~~~kwVRYiT~sg~Y~~ 299 (301)
T 3l81_A 240 GLSTSASPLGLGPASLSFELPRHTCSGLQVRFLRLAFRPSGNANPHKWVRHLSHSDAYVI 299 (301)
T ss_dssp --------CCCCCEEEEEEEETCCSSCCCEEEEEEEC-------CEEEEEEEEEEEEEEE
T ss_pred ccccccccccCCCEEEEEEeCCccccCcEEEEEEEecccccCCCCccceEEEEeCCcEEE
Confidence 12459999999999999999973 222 355 455777777999964
No 5
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=99.07 E-value=2.4e-08 Score=105.66 Aligned_cols=242 Identities=16% Similarity=0.199 Sum_probs=140.8
Q ss_pred cceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEeecCCccccccCCCCCcceEEEEcCCccccccccCccccccccccc
Q psy11046 281 IPLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENMLPNKQLINIEENKL 359 (550)
Q Consensus 281 ~pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLSFpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~PN~~~I~~~~~~s 359 (550)
=.+-.-|+|.||+.+ ++|.+.++ .|.|+|.+-= -|.+ -+.+.|.|++.-.+++-............+.
T Consensus 171 nei~vdV~E~v~~~~~~~G~v~~~--eV~G~I~~~~------~LsG---~P~~~l~ln~~~~~~~~~~~~~~~~~~~~~~ 239 (435)
T 2vgl_M 171 NELFLDVLESVNLLMSPQGQVLSA--HVSGRVVMKS------YLSG---MPECKFGMNDKIVIEKQGKGTADETSKSGKQ 239 (435)
T ss_dssp CEEEEEEEEEEEEEECTTCCEEEE--EEEEEEEEEE------ECSS---CCEEEEEECSSSCC-----------------
T ss_pred ceEEEEEEEEEEEEEcCCCCEEEE--EEEEEEEEEE------EeCC---CCeEEEEeCchhhcccccccccccccccccC
Confidence 357788999999999 56777775 5999998821 1112 2467788876432221100000000000000
Q ss_pred CCCCCCccEEEechh-HHHHHHHh--hccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEEEEEeCCC
Q psy11046 360 DKSSDSMTCEFNMSA-LSSLLRKQ--CEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKVDYKYNNH 436 (550)
Q Consensus 360 qs~~~~~~F~~nm~~-L~s~L~k~--aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~IdYk~Np~ 436 (550)
....+ ++.|-.-. +..|-+.. .=--|. -...+|+|++... ...||.+.+..+ +.+..+ |+|.+...
T Consensus 240 ~~~l~--d~~fH~cV~~~~f~~~r~isF~PPd---g~F~Lm~Yr~~~~---~~~P~~i~~~~~-~~~~~~--ve~~l~~~ 308 (435)
T 2vgl_M 240 SIAID--DCTFHQCVRLSKFDSERSISFIPPD---GEFELMRYRTTKD---IILPFRVIPLVR-EVGRTK--LEVKVVIK 308 (435)
T ss_dssp CCCCC--EEEECTTEEEC-----CCEEECCCS---EEEEEEEEEECSS---CCCSEEEEEEEE-CCTTTE--EEEEEEEE
T ss_pred ceEcc--ccccceeecHhHhccCceEEEECCC---CcEEEEEEEecCC---cCCCeEEEEEEE-ecCCCE--EEEEEEEe
Confidence 00000 12211000 00110000 000122 2346999999863 468999986555 544443 55544331
Q ss_pred C-CCCCcceeeEEEEEeeCCCeeeeeecCc---ccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCC-C---CcC
Q psy11046 437 A-MGSPSPLLNVVLAVPVDGEVTNVQAKPN---VQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGP-G---TPS 508 (550)
Q Consensus 437 ~-~~~~~~L~NV~v~vpvdg~vT~aqSkP~---gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~-~---~Ps 508 (550)
+ +.....++||+|.+|+-..+.++..++. +.|..+++.+.|+|+.+.... ...|.|+|.+.... . ...
T Consensus 309 ~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~~y~~~~~~l~W~I~~~~~~~----~~~l~~~~~l~~~~~~~~~~~~ 384 (435)
T 2vgl_M 309 SNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMK----ESQISAEIELLPTNDKKKWARP 384 (435)
T ss_dssp ECSCTTSEEEEEEEEEECCSSCCCEEEEESSSEEEEETTTTEEEEEEEEEETTC----EEEEEEEEECCCCSCSCCCCCC
T ss_pred CCCCCCceeeEEEEEEECCCCCCCceEEecceeEEEccCCCEEEEEeccCCCCC----CEEEEEEEEecCCCcCcccCCC
Confidence 1 1234579999999999777767766653 556789999999999876432 35899999975432 1 245
Q ss_pred eEEEEEEEcCCCcCCceEEE---cc-----CceeE-eeeeEEeeeeeeee
Q psy11046 509 TIATQFNCEGTTLSGAEFEL---IG-----PGYRV-SLVKRKFMSGKLVL 549 (550)
Q Consensus 509 ~VavqF~~egstlSGv~iel---~g-----sgyr~-slvkrrf~sGkYi~ 549 (550)
+|.|+|.+. .+.||+.|+- .+ ++|+. .-||--..+|.|.+
T Consensus 385 pi~v~F~i~-~t~Sgl~V~~l~v~~~~~~~~~y~~~kwVrY~t~sg~y~~ 433 (435)
T 2vgl_M 385 PISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYET 433 (435)
T ss_dssp CEEEEEEES-SCTTCCCEEEEEEECSSSSCBGGGSEEEEEEEEEEEEEEE
T ss_pred cEEEEEEEE-ecccccEEEEEEEeccccccCCCCCcCceEEEEeCCeEEE
Confidence 799999999 9999999973 23 36643 56677777899965
No 6
>1w63_M Adaptor-related protein complex 1, MU 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=99.07 E-value=8.4e-09 Score=108.76 Aligned_cols=230 Identities=17% Similarity=0.304 Sum_probs=138.4
Q ss_pred CcceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEeecCCccccccCCCCCcceEEEEcCCcccccc---------ccCc
Q psy11046 280 TIPLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLSFPAGIVSILTSNPSPAQLKFKVSNISHIENM---------LPNK 349 (550)
Q Consensus 280 ~~pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLSFpa~iv~~lt~np~p~~l~fRL~n~s~LEkv---------~PN~ 349 (550)
.=.+-.-|+|.||+.+ ++|.+.++ -|.|+|.+.= .|.+ -+.+.|.|++...+++. +-+-
T Consensus 168 ~nei~vdV~E~v~~~~~~~G~v~~~--eV~G~I~~~~------~LsG---~P~~~l~Ln~~~~~~~~~~~~~~~v~l~d~ 236 (423)
T 1w63_M 168 KNEVFLDVIEAVNLLVSANGNVLRS--EIVGSIKMRV------FLSG---MPELRLGLNDKVLFDNTGRGKSKSVELEDV 236 (423)
T ss_dssp SCEEEEEEEEEEEEEEETTTEEEEE--EEEEEEEEEE------ECSS---CCEEEEEECSCC-------------CEEEE
T ss_pred cceEEEEEEEEEEEEECCCCCEEEE--EEEEEEEEEE------EeCC---CCeEEEEECCccccccccccccCceEcccc
Confidence 3457788999999999 47777775 4999999821 1122 24677888765433210 0000
Q ss_pred ccccccccccCCCCCCccEEEechhHHHHHHHhhccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecCCCceeEEE
Q psy11046 350 QLINIEENKLDKSSDSMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCEPTHTDLKV 429 (550)
Q Consensus 350 ~~I~~~~~~sqs~~~~~~F~~nm~~L~s~L~k~aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE~~qTsv~I 429 (550)
+|=.++. +.. -..++...|- -|. -+..+|+|++... ...||.+.+..+ +.+... |
T Consensus 237 ~fHpcV~-~~~-f~~~r~isf~--------------PPd---g~F~Lm~Yr~~~~---~~~P~~i~~~~~-~~~~~~--v 291 (423)
T 1w63_M 237 KFHQCVR-LSR-FENDRTISFI--------------PPD---GEFELMSYRLNTH---VKPLIWIESVIE-KHSHSR--I 291 (423)
T ss_dssp EECTTEE-ESS-SSSCCEEEEC--------------CCS---EEEEEEEEEEECC---CCCTTCCEEEEE-EETTTE--E
T ss_pred ccccccc-HHH-hCCCCeEEEE--------------CCC---CcEEEEEEEecCC---cCCCEEEEEEEE-ecCCCE--E
Confidence 1111110 000 0001111111 122 1346999999863 457888876665 434443 5
Q ss_pred EEEeCCCC-CCCCcceeeEEEEEeeCCCeeeeeecCc---ccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCC-
Q psy11046 430 DYKYNNHA-MGSPSPLLNVVLAVPVDGEVTNVQAKPN---VQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGP- 504 (550)
Q Consensus 430 dYk~Np~~-~~~~~~L~NV~v~vpvdg~vT~aqSkP~---gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~- 504 (550)
+|.+...+ +.....++||+|.+|+-..+.++...+. +.|..+++.+.|+|+.+.... ...|.|+|.+..+.
T Consensus 292 e~~l~~~~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~~y~~~~~~l~W~I~~i~~~~----~~~l~~~~~l~~~~~ 367 (423)
T 1w63_M 292 EYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGK----EYLMRAHFGLPSVEA 367 (423)
T ss_dssp EEEEEEECCSCTTSEEESCEEEEECCTTCCCCEEEESSSEEEEETGGGEEEEECSEEETTC----EEEEEEEEEC-----
T ss_pred EEEEEEcccCCCcceeeEEEEEEeCCCCcccceEEecCccEEEecCCCEEEEEeCcCCCCC----cEEEEEEEEccCCCc
Confidence 55553221 1234579999999999766666665543 456789999999999886432 35799999875332
Q ss_pred ---CCcCeEEEEEEEcCCCcCCceEEE---cc-Ccee-EeeeeEEeeeeeeee
Q psy11046 505 ---GTPSTIATQFNCEGTTLSGAEFEL---IG-PGYR-VSLVKRKFMSGKLVL 549 (550)
Q Consensus 505 ---~~Ps~VavqF~~egstlSGv~iel---~g-sgyr-~slvkrrf~sGkYi~ 549 (550)
..-.++.|+|.+.+.+.||+.|+- .+ ++|+ +.-||.-..+|.|.+
T Consensus 368 ~~~~~~~pi~v~F~i~~~t~Sgl~V~~l~v~~~~~y~~~kwVrY~t~sg~y~~ 420 (423)
T 1w63_M 368 EDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQAIPWVRYITQNGDYQL 420 (423)
T ss_dssp -----CCCEEEEBCCSSCCTTCCCEEEEEEECSSCCCCEEEEEEEEEBSCEEE
T ss_pred ccccCCCcEEEEEEECCEeCCCCEEEEEEeEccCCCCCcCceEEEEeCCcEEE
Confidence 123569999999999999999973 23 3564 355677777898864
No 7
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=99.01 E-value=5e-08 Score=102.49 Aligned_cols=228 Identities=15% Similarity=0.205 Sum_probs=139.9
Q ss_pred cceeEEEEEEEEEEE-eCCcceeeeEEEEEEEEEe-ecCCccccccCCCCCcceEEEEcCCccccccc------------
Q psy11046 281 IPLAVAFHEIIHSYF-RGTDETRCQVKMSGDMMLS-FPAGIVSILTSNPSPAQLKFKVSNISHIENML------------ 346 (550)
Q Consensus 281 ~pLaaSI~EtVNA~F-kgg~~skc~VkVtGElaLS-Fpa~iv~~lt~np~p~~l~fRL~n~s~LEkv~------------ 346 (550)
=.|-.-|+|.||+.+ ++|.+.++ .|.|.|.+- |- ... +.+.|.|++--.+++-.
T Consensus 121 nEi~vdV~E~v~~~~~~~G~v~~~--eV~G~I~~k~~L-------sG~---P~~~l~LNd~~~~~~~~~~~~~~~~~~~~ 188 (385)
T 3ml6_A 121 NELFLDVLESVNLLMSPQGQVLSA--HVSGRVVMKSYL-------SGM---PECKFGMNDKIVIEKQGKGTADETSKSGK 188 (385)
T ss_dssp CEEEEEEEEEEEEEECTTSCEEEE--EEEEEEEEEEEC-------SSC---CEEEEEECC--------------------
T ss_pred ceEEEEEEEEEEEEECCCCCEEEE--EEEEEEEEEEeC-------CCC---CeEEEEEcCcccccccccccccccccccc
Confidence 356788999999999 57887775 499999882 22 222 35677775532222100
Q ss_pred -----cCcccccccccccCCCCCCccEEEechhHHHHHHHhhccCCCCccceeeeEEEEEecCCCCCCCCeeEEEEeecC
Q psy11046 347 -----PNKQLINIEENKLDKSSDSMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAHWKCE 421 (550)
Q Consensus 347 -----PN~~~I~~~~~~sqs~~~~~~F~~nm~~L~s~L~k~aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~WKcE 421 (550)
-+-+|=.++. ...-..++...|- -|.. ...+|+|++... ...||.+.+..+ +
T Consensus 189 ~~i~l~d~~FH~CV~--l~~f~~~r~IsFi--------------PPDg---~F~Lm~Yr~~~~---~~~Pf~i~~~v~-~ 245 (385)
T 3ml6_A 189 QSIAIDDCTFHQCVR--LSKFDSERSISFI--------------PPDG---EFELMRYRTTKD---IILPFRVIPLVR-E 245 (385)
T ss_dssp --CCCCEEEECTTBC--CCCSSSCSEEEEC--------------CCSE---EEEEEEEEECSS---CCCSEEEEEEEE-E
T ss_pred CceEccccccccccC--hhHccccceEEEe--------------CCCC---ceEEEEEEcCCC---CCCCEEEEEEEE-e
Confidence 0111111110 0000001112211 1221 346899999752 458998886544 3
Q ss_pred CCceeEEEEEEeCCCCCCCCcceeeEEEEEeeCCCeeeeeecCc---ccccCCCceeeEecCCccCCCCCCCceeEEEEE
Q psy11046 422 PTHTDLKVDYKYNNHAMGSPSPLLNVVLAVPVDGEVTNVQAKPN---VQWLPETNRAIWKFTDLSQHSENHGIGCVKARF 498 (550)
Q Consensus 422 ~~qTsv~IdYk~Np~~~~~~~~L~NV~v~vpvdg~vT~aqSkP~---gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF 498 (550)
.+.+.|-|.|++...+. ....++||.|.+|+-..+.+++.+.. +.|..+++.+.|+|+.+.... .-.|.|.|
T Consensus 246 ~~~~~vei~v~lk~~f~-~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~~y~~~~~~lvW~I~k~~g~~----e~~l~~~~ 320 (385)
T 3ml6_A 246 VGRTKLEVKVVIKSNFK-PSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMK----ESQISAEI 320 (385)
T ss_dssp ETTTEEEEEEEEEECSC-TTCCEEEEEEEEECCTTEEEEEEEESSSEEEEEGGGTEEEEEEEEECSSE----EEEEEEEE
T ss_pred CCCeEEEEEEEEeecCC-CcceEEEEEEEecCCCCcccceEEecCceEEEeccCcEEEEEeeeECCCc----ceEEEEEE
Confidence 33455555555443332 34689999999999777777776654 457889999999999886432 24699999
Q ss_pred eccCCC----CCcCeEEEEEEEcCCCcCCceEEE---cc-----Ccee-EeeeeEEeeeeeeee
Q psy11046 499 ELKNGP----GTPSTIATQFNCEGTTLSGAEFEL---IG-----PGYR-VSLVKRKFMSGKLVL 549 (550)
Q Consensus 499 ~~t~G~----~~Ps~VavqF~~egstlSGv~iel---~g-----sgyr-~slvkrrf~sGkYi~ 549 (550)
.+.... ..-.+|.|+|.+. -++|||.|+- .. ++|+ +.-||....+|.|.+
T Consensus 321 ~l~~~~~~~~~~~~PI~v~F~Ip-~t~SGl~Vr~L~v~e~~~~~~~y~~~kwVRYiT~sg~Y~~ 383 (385)
T 3ml6_A 321 ELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYET 383 (385)
T ss_dssp EECCCSSCCSCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSCCCGGGCEEEEEECEEEEEEEE
T ss_pred EECCCCCCccccCCCEEEEEEEe-ccccCCEEEEEEEecccCcccCCCccccEEEEEECCCEEe
Confidence 885321 1234699999999 9999999973 22 3566 445777777999975
No 8
>4hpq_A ATG31, KLTH0C07942P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=29.51 E-value=4.6 Score=32.86 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=29.8
Q ss_pred eeEEEEEeeCCCe-eeeeecCcccccCCCceeeEecCC
Q psy11046 445 LNVVLAVPVDGEV-TNVQAKPNVQWLPETNRAIWKFTD 481 (550)
Q Consensus 445 ~NV~v~vpvdg~v-T~aqSkP~gtwn~e~~ri~Wklpe 481 (550)
+|..|.|.|-|.- -+..-.|.-.|+.++.+++|++=.
T Consensus 4 ~NttVyVRlPg~Rp~gFVDPPp~~Wna~KD~~LW~IIS 41 (69)
T 4hpq_A 4 ENTIVYVRVAGRARNGFVDPLKFYWDLERDRSLWSSVX 41 (69)
T ss_dssp SSCEEEEECSSCCCSCCCCCCCCCCHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCCCCCCCCccChHHHHHHHHHHH
Confidence 5788888887654 466677889999999999999854
No 9
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=25.74 E-value=2.1e+02 Score=24.24 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=35.1
Q ss_pred CCcceeeEEEEEeeCCCeeeeeecCcccccCCCceeeEecCCccCCCCCCCceeEEEEEeccCCCCCcCeEEEEEEEcC
Q psy11046 440 SPSPLLNVVLAVPVDGEVTNVQAKPNVQWLPETNRAIWKFTDLSQHSENHGIGCVKARFELKNGPGTPSTIATQFNCEG 518 (550)
Q Consensus 440 ~~~~L~NV~v~vpvdg~vT~aqSkP~gtwn~e~~ri~WklpeLs~~se~~g~G~L~ARF~~t~G~~~Ps~VavqF~~eg 518 (550)
.+.+|+|.+|.+---|= . +...+++++|.-. +++..+|.++.-...+..+.|.|.|.-
T Consensus 32 L~~~L~~c~~~vEG~GL-----------~----~~~~~~~~~v~pg------~~~~~~~~~~P~~~G~~~L~a~f~s~~ 89 (102)
T 2xzz_A 32 LPVTLTNVVFRLEGSGL-----------Q----RPKILNVGDIGGN------ETVTLRQSFVPVRPGPRQLIASLDSPQ 89 (102)
T ss_dssp SSSCBCSEEEEEEETTT-----------E----EEEEEEECCBCTT------CEEEEEEEECCCSCSSCCCEEEEECGG
T ss_pred CCCcccCEEEEEECCCC-----------C----cceEEEcCcCCCC------CEEEEEEEEecCcccceEEEEEEECCc
Confidence 46799999988754321 1 1144566666432 456777766544444455788888753
No 10
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=11.53 E-value=1.6e+02 Score=26.14 Aligned_cols=52 Identities=8% Similarity=0.180 Sum_probs=36.3
Q ss_pred CccEEEechhHHHHHHHhhccCCCCccceeeeEEEEEecCCCCCCCCeeEEEE
Q psy11046 365 SMTCEFNMSALSSLLRKQCEQNPSASYFNVDILKYQIKSKPGAESCPFQLVAH 417 (550)
Q Consensus 365 ~~~F~~nm~~L~s~L~k~aeqnPtasy~nv~~lKYqV~~~~g~~~~PL~L~p~ 417 (550)
.|.|.+-- ..-.|.+++...-+..+||....+.|.|.......++||+|.|+
T Consensus 62 ~G~Y~l~F-~tg~Yf~~~~~~~~~~~F~p~V~i~F~i~d~~~HYHVPLLlSP~ 113 (121)
T 2h0e_A 62 SGEYVMEF-HAGDYFASKNMNAADQPFLTIVTVRFQLADPDAHYHIPLLLSPF 113 (121)
T ss_dssp SEEEEEEE-CHHHHHHTTC--CCSSCSCSSEEEEEEECCTTSEEECCEEEETT
T ss_pred ceEEEEEE-EhHHhHhhccccCCCCCCcceEEEEEEECCCCCCeEEeEEecCC
Confidence 57887765 35677775421113457999999999998534567999999874
Done!