Query psy11047
Match_columns 943
No_of_seqs 304 out of 2519
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 16:45:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 7.2E-72 2.5E-76 637.9 44.4 466 117-696 4-479 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 6.6E-72 2.3E-76 638.4 40.7 463 119-697 1-473 (475)
3 1js3_A DDC;, DOPA decarboxylas 100.0 2.3E-63 7.8E-68 564.8 42.2 464 119-698 1-477 (486)
4 3vp6_A Glutamate decarboxylase 100.0 4.4E-60 1.5E-64 545.8 48.5 455 112-696 14-506 (511)
5 2okj_A Glutamate decarboxylase 100.0 4.9E-59 1.7E-63 532.8 47.4 454 112-695 11-502 (504)
6 2qma_A Diaminobutyrate-pyruvat 100.0 4.9E-58 1.7E-62 523.7 43.3 455 108-694 20-495 (497)
7 2jis_A Cysteine sulfinic acid 100.0 1.9E-56 6.6E-61 513.7 45.6 449 116-694 31-514 (515)
8 2dgk_A GAD-beta, GADB, glutama 100.0 3.5E-42 1.2E-46 387.5 37.2 401 154-697 8-436 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.3E-40 4.6E-45 382.6 38.5 412 147-700 14-449 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 9E-35 3.1E-39 330.2 28.5 433 162-754 36-482 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 6E-34 2E-38 326.0 26.7 428 162-752 69-508 (514)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 2.2E-31 7.4E-36 304.0 22.9 368 162-698 21-446 (450)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 2.4E-29 8.3E-34 284.7 21.9 388 112-691 22-454 (456)
14 3f9t_A TDC, L-tyrosine decarbo 100.0 6E-27 2E-31 252.7 37.4 382 163-692 4-395 (397)
15 1wyu_B Glycine dehydrogenase s 99.9 1E-21 3.5E-26 223.4 33.3 377 162-694 40-440 (474)
16 4hvk_A Probable cysteine desul 99.8 2.5E-18 8.4E-23 184.5 31.4 311 223-697 35-375 (382)
17 4eb5_A Probable cysteine desul 99.8 7.7E-18 2.6E-22 181.8 32.7 310 223-696 35-374 (382)
18 3nnk_A Ureidoglycine-glyoxylat 99.8 1.2E-18 4E-23 190.4 26.3 343 189-694 9-389 (411)
19 3ffr_A Phosphoserine aminotran 99.8 1E-18 3.6E-23 186.8 24.1 332 194-691 5-360 (362)
20 3isl_A Purine catabolism prote 99.8 1.5E-18 5.3E-23 189.7 25.8 344 187-694 5-389 (416)
21 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 5.5E-19 1.9E-23 201.6 21.2 318 230-700 116-466 (501)
22 1wyu_A Glycine dehydrogenase ( 99.8 1.1E-17 3.7E-22 187.6 31.5 360 152-691 30-436 (438)
23 3lvm_A Cysteine desulfurase; s 99.8 1.3E-17 4.6E-22 183.4 31.3 311 226-696 63-400 (423)
24 1t3i_A Probable cysteine desul 99.8 2.5E-17 8.7E-22 180.0 29.0 309 229-695 70-413 (420)
25 2dr1_A PH1308 protein, 386AA l 99.8 3.4E-17 1.2E-21 176.9 28.5 312 226-697 48-381 (386)
26 3zrp_A Serine-pyruvate aminotr 99.8 9.3E-18 3.2E-22 180.9 22.9 311 225-695 29-363 (384)
27 1kmj_A Selenocysteine lyase; p 99.8 5.9E-17 2E-21 175.9 29.3 309 229-694 65-404 (406)
28 1eg5_A Aminotransferase; PLP-d 99.8 1.2E-16 4.1E-21 172.2 31.3 306 227-695 40-376 (384)
29 2yrr_A Aminotransferase, class 99.8 9.9E-18 3.4E-22 178.2 22.0 309 225-693 27-351 (353)
30 3kgw_A Alanine-glyoxylate amin 99.8 7.5E-17 2.6E-21 174.3 27.4 341 190-694 20-387 (393)
31 3e9k_A Kynureninase; kynurenin 99.8 4.7E-17 1.6E-21 183.3 26.7 331 207-694 86-460 (465)
32 2z9v_A Aspartate aminotransfer 99.8 1.5E-16 5.2E-21 172.9 28.9 335 191-694 8-370 (392)
33 3vax_A Putative uncharacterize 99.8 4.4E-17 1.5E-21 177.6 22.3 143 224-423 56-201 (400)
34 3a9z_A Selenocysteine lyase; P 99.7 3.1E-16 1.1E-20 173.6 29.0 185 194-423 21-227 (432)
35 3cai_A Possible aminotransfera 99.7 1.9E-16 6.4E-21 173.3 26.0 312 223-691 61-405 (406)
36 2huf_A Alanine glyoxylate amin 99.7 3.5E-16 1.2E-20 170.1 27.4 311 226-695 47-383 (393)
37 1iug_A Putative aspartate amin 99.7 3E-16 1E-20 167.5 24.8 304 225-695 28-348 (352)
38 1svv_A Threonine aldolase; str 99.7 7.8E-17 2.7E-21 172.1 19.1 305 227-694 45-357 (359)
39 3m5u_A Phosphoserine aminotran 99.7 1E-16 3.5E-21 178.4 20.6 328 197-694 9-359 (361)
40 1v72_A Aldolase; PLP-dependent 99.7 1.9E-17 6.5E-22 177.0 13.8 299 230-694 42-352 (356)
41 1vjo_A Alanine--glyoxylate ami 99.7 4.1E-16 1.4E-20 169.9 24.5 307 226-692 62-392 (393)
42 2bkw_A Alanine-glyoxylate amin 99.7 2.9E-16 1E-20 169.6 22.1 344 192-693 4-382 (385)
43 3f0h_A Aminotransferase; RER07 99.7 1E-15 3.5E-20 165.4 24.8 308 226-693 47-372 (376)
44 2w8t_A SPT, serine palmitoyltr 99.7 8.3E-15 2.9E-19 163.4 32.5 300 231-695 109-415 (427)
45 1elu_A L-cysteine/L-cystine C- 99.7 1.8E-15 6.1E-20 163.7 25.5 301 230-691 58-388 (390)
46 1m32_A 2-aminoethylphosphonate 99.7 1.2E-15 4.1E-20 163.0 23.4 306 231-692 37-362 (366)
47 2fnu_A Aminotransferase; prote 99.7 1.5E-15 5E-20 163.9 24.2 299 235-694 36-371 (375)
48 2ch1_A 3-hydroxykynurenine tra 99.7 1.3E-15 4.4E-20 165.9 23.8 312 226-695 46-383 (396)
49 3e77_A Phosphoserine aminotran 99.7 1.9E-16 6.5E-21 177.4 16.8 326 202-694 23-374 (377)
50 1b9h_A AHBA synthase, protein 99.7 2.7E-14 9.1E-19 155.9 30.3 318 210-693 21-386 (388)
51 2e7j_A SEP-tRNA:Cys-tRNA synth 99.7 1.5E-15 5.2E-20 163.5 19.4 296 230-694 52-369 (371)
52 3qm2_A Phosphoserine aminotran 99.7 1E-16 3.5E-21 179.8 10.4 306 226-694 67-384 (386)
53 1j32_A Aspartate aminotransfer 99.7 7.2E-15 2.5E-19 160.1 23.0 328 208-695 48-387 (388)
54 1qz9_A Kynureninase; kynurenin 99.7 1.2E-14 4E-19 159.6 24.7 298 231-693 71-400 (416)
55 3tqx_A 2-amino-3-ketobutyrate 99.6 6.1E-14 2.1E-18 152.5 29.3 300 231-694 88-395 (399)
56 3dzz_A Putative pyridoxal 5'-p 99.6 2.1E-14 7.1E-19 155.7 25.4 326 204-694 42-388 (391)
57 3dr4_A Putative perosamine syn 99.6 5.9E-15 2E-19 161.5 20.5 299 225-691 54-389 (391)
58 2c81_A Glutamine-2-deoxy-scyll 99.6 3.1E-14 1.1E-18 157.7 25.5 125 233-423 44-169 (418)
59 2vyc_A Biodegradative arginine 99.6 1.7E-14 6E-19 174.4 23.4 131 235-423 209-353 (755)
60 2fyf_A PSAT, phosphoserine ami 99.6 4.5E-15 1.6E-19 163.3 16.3 298 225-693 72-396 (398)
61 2cb1_A O-acetyl homoserine sul 99.6 4.3E-14 1.5E-18 157.4 23.5 121 233-423 58-182 (412)
62 3nra_A Aspartate aminotransfer 99.6 2.5E-14 8.6E-19 156.2 21.0 142 223-423 74-224 (407)
63 3ke3_A Putative serine-pyruvat 99.6 2.3E-14 8E-19 157.4 20.5 302 225-696 29-377 (379)
64 3frk_A QDTB; aminotransferase, 99.6 1.4E-14 4.8E-19 157.5 18.6 131 223-423 32-163 (373)
65 3uwc_A Nucleotide-sugar aminot 99.6 4E-14 1.4E-18 153.2 21.4 315 208-693 21-369 (374)
66 1xi9_A Putative transaminase; 99.6 9.9E-14 3.4E-18 152.8 24.8 326 205-695 57-403 (406)
67 1gd9_A Aspartate aminotransfer 99.6 1.6E-13 5.5E-18 149.5 24.5 156 208-423 44-205 (389)
68 2gb3_A Aspartate aminotransfer 99.6 1.3E-13 4.5E-18 152.2 24.0 319 205-695 59-402 (409)
69 2zc0_A Alanine glyoxylate tran 99.6 8.8E-14 3E-18 152.5 22.2 337 205-696 51-405 (407)
70 1mdo_A ARNB aminotransferase; 99.6 4.9E-13 1.7E-17 145.6 26.8 298 225-695 37-386 (393)
71 2x3l_A ORN/Lys/Arg decarboxyla 99.6 3.1E-15 1E-19 169.5 9.4 288 231-694 57-352 (446)
72 1o69_A Aminotransferase; struc 99.6 7E-13 2.4E-17 146.2 27.9 129 226-421 31-159 (394)
73 1fc4_A 2-amino-3-ketobutyrate 99.6 1E-12 3.5E-17 143.8 28.8 299 231-694 90-396 (401)
74 4dq6_A Putative pyridoxal phos 99.5 4.9E-13 1.7E-17 144.9 24.2 156 204-423 47-209 (391)
75 3b8x_A WBDK, pyridoxamine 5-ph 99.5 1.8E-12 6.2E-17 142.0 28.9 137 223-423 30-167 (390)
76 1w23_A Phosphoserine aminotran 99.5 1.1E-13 3.8E-18 148.6 18.8 301 226-693 43-358 (360)
77 3l8a_A METC, putative aminotra 99.5 5.3E-13 1.8E-17 148.2 24.5 158 204-423 76-239 (421)
78 3g0t_A Putative aminotransfera 99.5 1E-12 3.6E-17 145.3 26.7 146 223-423 78-227 (437)
79 3ffh_A Histidinol-phosphate am 99.5 1.9E-12 6.4E-17 139.8 27.7 286 234-691 70-362 (363)
80 1o4s_A Aspartate aminotransfer 99.5 5E-13 1.7E-17 146.6 23.5 156 208-423 59-219 (389)
81 3euc_A Histidinol-phosphate am 99.5 1.2E-12 4.2E-17 141.5 26.0 284 235-692 71-365 (367)
82 2po3_A 4-dehydrase; external a 99.5 4.1E-12 1.4E-16 141.2 30.8 311 208-695 34-386 (424)
83 2oga_A Transaminase; PLP-depen 99.5 6.2E-13 2.1E-17 146.6 23.9 304 223-694 59-395 (399)
84 3a2b_A Serine palmitoyltransfe 99.5 9.3E-13 3.2E-17 144.2 25.0 299 230-694 87-391 (398)
85 3kax_A Aminotransferase, class 99.5 1.8E-12 6E-17 140.2 26.0 157 204-423 39-201 (383)
86 3ly1_A Putative histidinol-pho 99.5 4.1E-12 1.4E-16 136.4 28.3 291 234-693 54-350 (354)
87 1jg8_A L-ALLO-threonine aldola 99.5 2.4E-13 8.3E-18 145.5 18.2 302 223-693 34-344 (347)
88 2dkj_A Serine hydroxymethyltra 99.5 1.6E-13 5.4E-18 149.9 16.9 302 225-694 63-387 (407)
89 3kki_A CAI-1 autoinducer synth 99.5 3.5E-12 1.2E-16 140.6 27.3 289 235-693 108-402 (409)
90 1v2d_A Glutamine aminotransfer 99.5 6.3E-13 2.2E-17 144.7 21.0 126 236-423 66-197 (381)
91 1u08_A Hypothetical aminotrans 99.5 2.2E-12 7.5E-17 140.7 25.3 157 207-423 47-208 (386)
92 1c7n_A Cystalysin; transferase 99.5 2.5E-12 8.4E-17 140.6 25.7 155 208-423 49-209 (399)
93 2c0r_A PSAT, phosphoserine ami 99.5 2.6E-12 9E-17 138.8 24.8 294 226-693 44-359 (362)
94 2vi8_A Serine hydroxymethyltra 99.5 1.6E-13 5.6E-18 149.7 15.4 302 225-695 63-387 (405)
95 3dyd_A Tyrosine aminotransfera 99.5 2E-12 7E-17 144.2 24.5 155 208-423 76-236 (427)
96 3cq5_A Histidinol-phosphate am 99.5 9.6E-12 3.3E-16 135.2 29.2 291 229-692 71-365 (369)
97 1c4k_A Protein (ornithine deca 99.5 4.3E-13 1.5E-17 161.7 20.2 131 235-423 177-322 (730)
98 2o0r_A RV0858C (N-succinyldiam 99.5 6.2E-13 2.1E-17 146.7 19.5 156 208-423 43-205 (411)
99 3piu_A 1-aminocyclopropane-1-c 99.5 5.5E-12 1.9E-16 140.4 26.9 145 227-423 86-236 (435)
100 1bs0_A Protein (8-amino-7-oxon 99.5 6.1E-12 2.1E-16 136.8 26.1 293 231-691 84-383 (384)
101 1iay_A ACC synthase 2, 1-amino 99.5 2.3E-12 7.8E-17 142.9 23.2 143 229-423 85-233 (428)
102 1vp4_A Aminotransferase, putat 99.5 8.9E-12 3.1E-16 138.5 27.8 339 205-698 60-421 (425)
103 2rfv_A Methionine gamma-lyase; 99.5 2E-12 6.9E-17 142.7 22.4 124 231-423 64-191 (398)
104 3nyt_A Aminotransferase WBPE; 99.5 1.9E-12 6.5E-17 140.9 21.9 131 223-423 31-162 (367)
105 3qhx_A Cystathionine gamma-syn 99.5 5E-12 1.7E-16 140.4 25.5 284 225-688 64-391 (392)
106 2bwn_A 5-aminolevulinate synth 99.5 3.2E-12 1.1E-16 140.0 23.5 299 234-694 94-399 (401)
107 3h14_A Aminotransferase, class 99.5 6.6E-12 2.2E-16 137.1 25.4 156 204-423 46-206 (391)
108 1ax4_A Tryptophanase; tryptoph 99.5 1.6E-12 5.5E-17 145.5 21.0 142 222-421 71-227 (467)
109 1gc0_A Methionine gamma-lyase; 99.5 1.1E-12 3.9E-17 145.1 19.5 126 225-423 63-192 (398)
110 2z61_A Probable aspartate amin 99.5 4.2E-12 1.4E-16 137.7 23.3 149 208-423 47-195 (370)
111 2zyj_A Alpha-aminodipate amino 99.5 2.1E-11 7.3E-16 133.6 28.7 330 205-697 49-395 (397)
112 1d2f_A MALY protein; aminotran 99.5 1E-11 3.4E-16 135.6 26.0 156 207-423 45-207 (390)
113 3lws_A Aromatic amino acid bet 99.5 2.3E-12 8E-17 138.7 20.6 329 191-691 11-355 (357)
114 1bw0_A TAT, protein (tyrosine 99.5 1.6E-11 5.5E-16 135.2 27.3 141 223-423 71-222 (416)
115 1rv3_A Serine hydroxymethyltra 99.5 3.6E-13 1.2E-17 154.1 14.7 141 223-423 82-233 (483)
116 3tcm_A Alanine aminotransferas 99.4 3.8E-11 1.3E-15 137.7 30.9 167 204-423 108-282 (500)
117 2ctz_A O-acetyl-L-homoserine s 99.4 1.2E-11 4.2E-16 138.6 25.9 125 225-422 56-186 (421)
118 2a7v_A Serine hydroxymethyltra 99.4 3.7E-12 1.3E-16 147.2 21.7 332 204-694 67-440 (490)
119 1yiz_A Kynurenine aminotransfe 99.4 8.2E-12 2.8E-16 138.3 23.4 156 208-423 55-227 (429)
120 3ele_A Amino transferase; RER0 99.4 7.9E-12 2.7E-16 136.6 22.9 142 223-423 72-223 (398)
121 3get_A Histidinol-phosphate am 99.4 4E-11 1.4E-15 129.5 27.8 287 235-692 69-364 (365)
122 3ftb_A Histidinol-phosphate am 99.4 1.2E-11 4.2E-16 132.8 23.7 285 235-693 65-359 (361)
123 3aow_A Putative uncharacterize 99.4 3.3E-11 1.1E-15 136.1 28.1 337 205-695 93-445 (448)
124 3fdb_A Beta C-S lyase, putativ 99.4 1.8E-11 6.2E-16 132.3 23.8 132 230-423 61-195 (377)
125 3n0l_A Serine hydroxymethyltra 99.4 1.9E-11 6.6E-16 133.9 23.6 306 224-694 64-388 (417)
126 3pj0_A LMO0305 protein; struct 99.4 8.4E-12 2.9E-16 134.2 19.8 299 223-690 44-357 (359)
127 1vef_A Acetylornithine/acetyl- 99.4 3E-11 1E-15 132.1 24.2 129 231-423 87-231 (395)
128 3ju7_A Putative PLP-dependent 99.4 3.9E-11 1.4E-15 132.8 25.2 133 225-423 34-167 (377)
129 3op7_A Aminotransferase class 99.4 1.6E-11 5.5E-16 133.1 21.5 304 220-694 56-370 (375)
130 2oqx_A Tryptophanase; lyase, p 99.4 1.2E-11 4.2E-16 138.4 19.8 171 193-422 42-228 (467)
131 2dou_A Probable N-succinyldiam 99.4 6E-11 2E-15 128.9 23.9 138 227-423 63-203 (376)
132 1cs1_A CGS, protein (cystathio 99.4 1.8E-10 6.1E-15 126.4 27.3 126 225-423 50-179 (386)
133 1e5e_A MGL, methionine gamma-l 99.4 1.5E-10 5.3E-15 129.0 26.9 119 236-423 67-190 (404)
134 1b5p_A Protein (aspartate amin 99.3 1.3E-10 4.3E-15 127.4 25.4 137 227-423 68-209 (385)
135 3ecd_A Serine hydroxymethyltra 99.3 4.7E-11 1.6E-15 130.9 21.8 300 231-695 78-397 (425)
136 2ez2_A Beta-tyrosinase, tyrosi 99.3 4.8E-11 1.7E-15 133.4 22.4 135 222-422 70-219 (456)
137 1sff_A 4-aminobutyrate aminotr 99.3 3.2E-10 1.1E-14 125.0 28.4 137 233-423 86-245 (426)
138 3gbx_A Serine hydroxymethyltra 99.3 1.8E-11 6.3E-16 133.9 18.3 300 229-694 74-395 (420)
139 1fg7_A Histidinol phosphate am 99.3 9.4E-11 3.2E-15 127.5 23.6 287 235-690 62-353 (356)
140 1qgn_A Protein (cystathionine 99.3 4.2E-11 1.4E-15 136.6 21.6 126 225-423 112-242 (445)
141 3fvs_A Kynurenine--oxoglutarat 99.3 9.9E-11 3.4E-15 128.9 23.4 142 223-423 63-219 (422)
142 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.3 2.3E-10 7.8E-15 128.0 26.5 138 224-423 59-197 (437)
143 3ezs_A Aminotransferase ASPB; 99.3 7.2E-11 2.4E-15 127.8 21.4 137 228-423 60-199 (376)
144 3e2y_A Kynurenine-oxoglutarate 99.3 7.9E-11 2.7E-15 128.9 21.9 137 228-423 62-212 (410)
145 2x5d_A Probable aminotransfera 99.3 1.4E-10 4.7E-15 128.0 23.3 139 226-423 74-217 (412)
146 2o1b_A Aminotransferase, class 99.3 6.4E-11 2.2E-15 131.0 20.6 142 223-423 81-226 (404)
147 3ri6_A O-acetylhomoserine sulf 99.3 1.8E-10 6.1E-15 130.7 24.6 127 224-423 79-209 (430)
148 3hdo_A Histidinol-phosphate am 99.3 5.6E-10 1.9E-14 120.7 27.3 281 235-694 69-354 (360)
149 3if2_A Aminotransferase; YP_26 99.3 8.6E-11 2.9E-15 130.7 21.5 153 223-423 79-251 (444)
150 2eh6_A Acoat, acetylornithine 99.3 2.2E-10 7.5E-15 123.9 23.7 129 235-423 74-218 (375)
151 3jtx_A Aminotransferase; NP_28 99.3 2.6E-10 8.9E-15 124.3 24.3 141 228-423 67-213 (396)
152 4adb_A Succinylornithine trans 99.3 1.9E-10 6.6E-15 125.7 23.0 130 233-423 83-229 (406)
153 3ruy_A Ornithine aminotransfer 99.3 3E-10 1E-14 124.1 24.1 289 234-692 81-391 (392)
154 3b46_A Aminotransferase BNA3; 99.3 7.3E-11 2.5E-15 132.6 19.8 158 206-423 73-246 (447)
155 1lc5_A COBD, L-threonine-O-3-p 99.3 2.3E-10 7.9E-15 123.9 22.8 287 235-694 63-359 (364)
156 3acz_A Methionine gamma-lyase; 99.3 3.7E-10 1.3E-14 124.9 24.9 125 226-423 58-186 (389)
157 3p1t_A Putative histidinol-pho 99.3 3.6E-10 1.2E-14 120.2 23.8 122 235-423 55-176 (337)
158 1n8p_A Cystathionine gamma-lya 99.3 4.2E-11 1.4E-15 133.2 16.7 118 235-423 59-184 (393)
159 2fq6_A Cystathionine beta-lyas 99.3 1.9E-10 6.5E-15 129.7 21.6 126 225-423 80-211 (415)
160 3ndn_A O-succinylhomoserine su 99.3 3.2E-10 1.1E-14 127.6 23.2 125 225-422 79-207 (414)
161 1pff_A Methionine gamma-lyase; 99.3 1.3E-10 4.3E-15 124.2 18.6 119 236-423 3-126 (331)
162 2ord_A Acoat, acetylornithine 99.3 2E-10 6.9E-15 125.8 20.6 132 231-423 82-229 (397)
163 3ez1_A Aminotransferase MOCR f 99.3 6.2E-10 2.1E-14 123.0 24.4 322 236-697 75-417 (423)
164 3nx3_A Acoat, acetylornithine 99.2 1.1E-09 3.6E-14 120.0 25.3 132 231-423 78-225 (395)
165 3dxv_A Alpha-amino-epsilon-cap 99.2 1.8E-09 6E-14 120.4 26.4 140 230-423 85-247 (439)
166 2x5f_A Aspartate_tyrosine_phen 99.2 4.4E-10 1.5E-14 124.7 21.2 313 229-695 90-429 (430)
167 3ppl_A Aspartate aminotransfer 99.2 1E-09 3.5E-14 121.8 24.0 320 236-697 83-422 (427)
168 2r2n_A Kynurenine/alpha-aminoa 99.2 3.3E-09 1.1E-13 118.1 28.1 146 230-423 81-236 (425)
169 3h7f_A Serine hydroxymethyltra 99.2 1.4E-10 4.7E-15 130.7 16.3 133 225-421 85-223 (447)
170 3i4j_A Aminotransferase, class 99.2 3E-09 1E-13 118.2 26.7 144 231-423 72-237 (430)
171 1s0a_A Adenosylmethionine-8-am 99.2 5.4E-09 1.9E-13 116.1 26.9 138 235-423 90-251 (429)
172 1z7d_A Ornithine aminotransfer 99.2 1.3E-08 4.4E-13 114.3 30.1 135 232-423 108-258 (433)
173 3ihj_A Alanine aminotransferas 99.2 9.2E-09 3.1E-13 118.2 29.4 152 221-423 123-280 (498)
174 3fkd_A L-threonine-O-3-phospha 99.2 3.4E-09 1.2E-13 113.9 24.3 278 235-693 54-340 (350)
175 3g7q_A Valine-pyruvate aminotr 99.2 1.8E-09 6.2E-14 118.4 22.4 161 206-423 49-225 (417)
176 3nmy_A Xometc, cystathionine g 99.2 1.5E-09 5.2E-14 121.6 21.9 126 224-423 64-194 (400)
177 3fsl_A Aromatic-amino-acid ami 99.2 1.5E-09 5.3E-14 118.2 21.4 163 205-423 47-218 (397)
178 2pb2_A Acetylornithine/succiny 99.1 2.8E-09 9.7E-14 118.9 23.3 133 231-423 99-247 (420)
179 3hmu_A Aminotransferase, class 99.1 3.2E-08 1.1E-12 113.0 31.1 143 231-423 99-269 (472)
180 3cog_A Cystathionine gamma-lya 99.1 9.2E-10 3.1E-14 123.0 17.7 124 226-423 66-194 (403)
181 3rq1_A Aminotransferase class 99.1 2.4E-09 8.2E-14 118.1 20.7 148 223-423 76-231 (418)
182 2eo5_A 419AA long hypothetical 99.1 1.1E-08 3.7E-13 113.8 25.7 135 234-423 89-258 (419)
183 3a8u_X Omega-amino acid--pyruv 99.1 9.8E-09 3.4E-13 114.9 24.9 142 233-423 95-265 (449)
184 3gju_A Putative aminotransfera 99.1 4.2E-08 1.4E-12 110.7 30.0 144 231-423 95-267 (460)
185 3n5m_A Adenosylmethionine-8-am 99.1 3.5E-08 1.2E-12 110.6 29.1 143 230-423 90-261 (452)
186 2oat_A Ornithine aminotransfer 99.1 7E-09 2.4E-13 116.8 23.4 132 235-423 122-269 (439)
187 3d6k_A Putative aminotransfera 99.1 8.1E-09 2.8E-13 114.8 23.4 320 236-697 81-420 (422)
188 1zod_A DGD, 2,2-dialkylglycine 99.1 1.2E-08 4E-13 113.3 24.1 137 232-423 86-249 (433)
189 2cjg_A L-lysine-epsilon aminot 99.1 1.3E-08 4.4E-13 114.9 24.7 64 626-694 384-447 (449)
190 3dod_A Adenosylmethionine-8-am 99.1 7.4E-08 2.5E-12 108.2 30.7 143 231-423 87-257 (448)
191 4a6r_A Omega transaminase; tra 99.1 4.8E-08 1.6E-12 110.3 28.3 144 230-423 93-265 (459)
192 3ei9_A LL-diaminopimelate amin 99.1 4.9E-09 1.7E-13 116.3 19.9 135 223-423 94-243 (432)
193 3qgu_A LL-diaminopimelate amin 99.0 8.8E-09 3E-13 114.9 21.6 306 223-693 107-438 (449)
194 1ibj_A CBL, cystathionine beta 99.0 1.9E-09 6.4E-14 123.4 16.3 122 232-423 134-259 (464)
195 4f4e_A Aromatic-amino-acid ami 99.0 1E-08 3.4E-13 113.8 21.5 163 205-423 70-240 (420)
196 3t18_A Aminotransferase class 99.0 8.3E-09 2.8E-13 113.6 20.3 184 186-423 39-230 (413)
197 1ajs_A Aspartate aminotransfer 99.0 6E-09 2E-13 114.5 18.7 167 207-423 52-228 (412)
198 2ay1_A Aroat, aromatic amino a 99.0 6.1E-09 2.1E-13 113.6 17.6 157 208-423 49-214 (394)
199 4ffc_A 4-aminobutyrate aminotr 99.0 4.2E-08 1.4E-12 111.0 25.0 88 606-696 357-450 (453)
200 3b1d_A Betac-S lyase; HET: PLP 98.5 4.4E-11 1.5E-15 131.1 0.0 136 229-423 68-209 (392)
201 3i16_A Aluminum resistance pro 99.0 1.2E-08 4E-13 116.1 19.7 130 228-423 74-224 (427)
202 1ohv_A 4-aminobutyrate aminotr 99.0 2.5E-08 8.7E-13 113.7 22.5 152 230-423 109-304 (472)
203 7aat_A Aspartate aminotransfer 99.0 1.4E-08 4.7E-13 111.2 19.5 148 222-423 66-220 (401)
204 3i5t_A Aminotransferase; pyrid 99.0 1.4E-07 4.7E-12 107.8 28.1 145 230-423 96-267 (476)
205 3oks_A 4-aminobutyrate transam 99.0 1.7E-07 5.7E-12 105.9 27.8 140 231-423 104-273 (451)
206 3fq8_A Glutamate-1-semialdehyd 99.0 1.4E-08 4.7E-13 112.7 18.7 132 230-423 91-245 (427)
207 3n75_A LDC, lysine decarboxyla 99.0 1.1E-08 3.7E-13 123.3 18.7 127 236-423 200-336 (715)
208 3tfu_A Adenosylmethionine-8-am 98.9 3.2E-08 1.1E-12 112.4 21.4 143 231-423 118-280 (457)
209 1yaa_A Aspartate aminotransfer 98.9 7E-09 2.4E-13 114.2 15.4 161 208-423 52-221 (412)
210 3l44_A Glutamate-1-semialdehyd 98.9 9.3E-08 3.2E-12 106.3 23.7 128 234-423 98-248 (434)
211 4e77_A Glutamate-1-semialdehyd 98.9 1.4E-07 4.8E-12 104.9 24.7 131 231-423 93-246 (429)
212 3jzl_A Putative cystathionine 98.9 3.6E-08 1.2E-12 111.3 19.7 127 229-423 61-207 (409)
213 2q7w_A Aspartate aminotransfer 98.9 2.1E-08 7.2E-13 109.2 16.1 163 205-423 47-217 (396)
214 3meb_A Aspartate aminotransfer 98.9 1.9E-07 6.6E-12 105.1 24.3 117 260-423 119-247 (448)
215 1uu1_A Histidinol-phosphate am 98.9 9.8E-08 3.3E-12 102.3 20.8 116 235-423 60-179 (335)
216 2epj_A Glutamate-1-semialdehyd 98.9 1.9E-07 6.6E-12 103.9 23.7 132 230-423 95-249 (434)
217 3k28_A Glutamate-1-semialdehyd 98.9 7.1E-08 2.4E-12 107.4 20.1 127 235-423 97-246 (429)
218 3asa_A LL-diaminopimelate amin 98.8 8.7E-08 3E-12 105.4 19.6 108 260-423 97-208 (400)
219 2cy8_A D-phgat, D-phenylglycin 98.8 4.6E-07 1.6E-11 101.6 25.3 133 229-423 95-247 (453)
220 2aeu_A Hypothetical protein MJ 98.8 2.6E-08 8.8E-13 109.8 14.5 123 230-423 57-184 (374)
221 3hvy_A Cystathionine beta-lyas 98.8 3E-07 1E-11 104.5 21.5 128 229-423 76-224 (427)
222 3f6t_A Aspartate aminotransfer 98.8 2.1E-07 7.1E-12 107.9 19.7 163 204-423 117-290 (533)
223 3ht4_A Aluminum resistance pro 98.7 1E-07 3.6E-12 108.1 15.3 129 234-423 68-213 (431)
224 2e7u_A Glutamate-1-semialdehyd 98.5 2.6E-06 8.8E-11 94.5 19.9 131 230-423 91-244 (424)
225 4eu1_A Mitochondrial aspartate 98.5 4E-06 1.4E-10 92.3 21.2 148 222-423 74-228 (409)
226 3ou5_A Serine hydroxymethyltra 98.0 0.00021 7.1E-09 82.2 19.8 139 225-422 94-242 (490)
227 4ao9_A Beta-phenylalanine amin 98.0 0.00028 9.5E-09 81.0 20.5 129 232-422 128-265 (454)
228 2yky_A Beta-transaminase; tran 97.2 9.9E-07 3.4E-11 101.4 0.0 131 230-423 139-278 (465)
229 2zy4_A L-aspartate beta-decarb 97.9 0.00038 1.3E-08 81.2 20.6 138 231-423 143-292 (546)
230 3bwn_A AT1G70560, L-tryptophan 97.9 0.0004 1.4E-08 76.7 18.3 126 230-422 71-196 (391)
231 4e3q_A Pyruvate transaminase; 97.8 0.0016 5.6E-08 74.9 23.1 55 641-700 419-473 (473)
232 4atq_A 4-aminobutyrate transam 97.6 0.036 1.2E-06 63.5 29.9 52 640-693 402-453 (456)
233 4a0g_A Adenosylmethionine-8-am 97.2 0.0048 1.6E-07 75.8 17.1 48 641-693 779-826 (831)
234 2hox_A ALLIIN lyase 1; cystein 97.1 0.0011 3.6E-08 74.6 8.9 112 229-372 102-214 (427)
235 3k7y_A Aspartate aminotransfer 96.5 0.018 6.1E-07 64.6 13.2 147 222-423 67-219 (405)
236 4h51_A Aspartate aminotransfer 96.1 0.082 2.8E-06 59.8 16.2 119 260-423 111-235 (420)
237 4e1o_A HDC, histidine decarbox 74.8 1.4 4.9E-05 49.9 3.1 82 383-464 348-440 (481)
238 3k40_A Aromatic-L-amino-acid d 74.8 1 3.5E-05 51.1 1.9 82 383-464 341-433 (475)
239 1js3_A DDC;, DOPA decarboxylas 42.8 9.8 0.00034 42.7 2.3 80 383-462 344-434 (486)
240 3vpj_E TSE1-specific immunity 30.6 9.7 0.00033 36.6 -0.2 43 733-777 15-58 (192)
241 3vp6_A Glutamate decarboxylase 24.7 30 0.001 39.5 2.3 79 383-461 357-463 (511)
242 2okj_A Glutamate decarboxylase 20.7 45 0.0015 37.6 2.7 81 383-463 354-462 (504)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-72 Score=637.88 Aligned_cols=466 Identities=54% Similarity=0.912 Sum_probs=420.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeE
Q psy11047 117 RKIPLIPVILVGKEMVDYIADYLENIRDRRVYPDVKPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHA 196 (943)
Q Consensus 117 ~~~~~e~fr~~~~~~vd~i~dyl~~~~~~pV~p~~~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g 196 (943)
..||.++||+.+++++|.+++|+++++++||+|.++|+++++.++..+|++|++++++++++.+.++++.++|+||+|+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 83 (481)
T 4e1o_A 4 GSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHA 83 (481)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHH
Q psy11047 197 YFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLL 276 (943)
Q Consensus 197 ~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~ 276 (943)
|+++++++|++++++++.++|+|+..|..+|++++||.++++|+++++|+|..++...+.+.++|+||+|||+||++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~ 163 (481)
T 4e1o_A 84 YYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALL 163 (481)
T ss_dssp SSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976543222344689999999999999999
Q ss_pred HHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcE
Q psy11047 277 AGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPF 356 (943)
Q Consensus 277 aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~ 356 (943)
+||++.+.+.+..++++...++.++.+||+|+.+|+|+.|++.+++.+++.||+|++++||+++|+++|+++..+|..|+
T Consensus 164 ~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~ 243 (481)
T 4e1o_A 164 AARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPV 243 (481)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcE
Confidence 99998776554334544334445778999999999999999987777999999999999999999999999988888899
Q ss_pred EEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccce
Q psy11047 357 FIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGM 436 (943)
Q Consensus 357 ~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~ 436 (943)
+|++++|+|.+|++|||++|++ +|++||+ |+|||||||++ ++
T Consensus 244 ~vv~~~~~t~~G~id~l~~I~~--------------------la~~~~~-------~lhvDaA~g~~-~~---------- 285 (481)
T 4e1o_A 244 FVCATLGTTGVCAFDCLSELGP--------------------ICAREGL-------WLHIDAAYAGT-AF---------- 285 (481)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHH--------------------HHHHHTC-------EEEEECTTGGG-GG----------
T ss_pred EEEEecCCCCCcCcCCHHHHHH--------------------HHHHcCC-------eEEeehhhHHH-HH----------
Confidence 9999999999999999999999 9999999 99999999987 33
Q ss_pred eeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCccccc
Q psy11047 437 VVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLR 507 (943)
Q Consensus 437 VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~ 507 (943)
.+++++..+.|+++||||++|+||||+ ++++..+..++...+.|+.
T Consensus 286 -------------------------~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~ 340 (481)
T 4e1o_A 286 -------------------------LCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLR 340 (481)
T ss_dssp -------------------------GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGC
T ss_pred -------------------------hChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhcc
Confidence 456677778899999999999999998 5666666667777889998
Q ss_pred cCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhccccccccccc
Q psy11047 508 HENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 587 (943)
Q Consensus 508 ~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~ 587 (943)
....+..+++.+|++++||+++++++|++++.+|.+|+++++++
T Consensus 341 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~------------------------------------ 384 (481)
T 4e1o_A 341 HANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRH------------------------------------ 384 (481)
T ss_dssp CTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHH------------------------------------
T ss_pred CcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHH------------------------------------
Confidence 76545456889999999999999999999999999999999998
Q ss_pred CCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcE
Q psy11047 588 TNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGL 667 (943)
Q Consensus 588 ~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~ 667 (943)
..++|+++++.|+++|+|+++.++.+++|+|++++.+..+.++.++|+++|.++++++.+.+..+
T Consensus 385 ---------------~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~ 449 (481)
T 4e1o_A 385 ---------------GTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLI 449 (481)
T ss_dssp ---------------HHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEE
T ss_pred ---------------HHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEE
Confidence 46789999999999999999999999999999987777789999999999998999988888899
Q ss_pred EEE-eecCCCCHHHHHHHHHHHHHHHHHHH
Q psy11047 668 GRA-QNFTRTTNDDITRDWNEIRNTATEIL 696 (943)
Q Consensus 668 lR~-v~~~~tt~edId~ll~~I~~~~~~ll 696 (943)
+|+ ++++++|++||+++++.|++++++++
T Consensus 450 lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 450 IRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999 68899999999999999999988765
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=6.6e-72 Score=638.36 Aligned_cols=463 Identities=46% Similarity=0.806 Sum_probs=396.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEc
Q psy11047 119 IPLIPVILVGKEMVDYIADYLENIRDRRVYPDVKPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYF 198 (943)
Q Consensus 119 ~~~e~fr~~~~~~vd~i~dyl~~~~~~pV~p~~~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~ 198 (943)
||.++||+.+++++|.+++|+++++++||+|.++|+++++.++..+|++|++++++++++.+.++++.++|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHH
Q psy11047 199 PALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAG 278 (943)
Q Consensus 199 ~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aA 278 (943)
+++++++++++++++.++|+|+..|..+|.+++||.++++|+++++|+|..+++ .+.+.++|+||+|||+||++||++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~-~~~~~~~gv~t~ggt~anl~al~~a 159 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLA-CSGGKGGGVIQGTASESTLVALLGA 159 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCG-GGTSSCEEEEESCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhcc-ccCCCCCeEEcCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999986543 2234468999999999999999999
Q ss_pred HHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEE
Q psy11047 279 RTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFI 358 (943)
Q Consensus 279 R~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~V 358 (943)
|++..++.+...+++...++.++++||+|+.+|+|+.|++.+++.+++.||+|++| ||+++|+++|+++..+|..|++|
T Consensus 160 r~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v 238 (475)
T 3k40_A 160 KAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYA 238 (475)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEE
Confidence 99876554333444433334457899999999999999997655699999999999 99999999999998888889999
Q ss_pred EEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceee
Q psy11047 359 FSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVV 438 (943)
Q Consensus 359 VaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~Vc 438 (943)
++++|+|.+|++||+++|++ +|++||+ |+|||||||++ .+
T Consensus 239 ~~~~~~t~~G~~~~l~~I~~--------------------la~~~~~-------~lhvD~A~~~~-~~------------ 278 (475)
T 3k40_A 239 VVTLGTTNSCAFDYLDECGP--------------------VGNKHNL-------WIHVDAAYAGS-AF------------ 278 (475)
T ss_dssp EEEBSCTTTCCBCCHHHHHH--------------------HHHHTTC-------EEEEECTTGGG-GG------------
T ss_pred EEEecCCCCcCcCCHHHHHH--------------------HHHHhCC-------eEEEeHHhHHH-HH------------
Confidence 99999999999999999999 9999999 99999999987 33
Q ss_pred eeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCccccccC
Q psy11047 439 IRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLRHE 509 (943)
Q Consensus 439 FR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~~ 509 (943)
.++.++..+.|++.+||+++|+|||++ ++++..+..++...+.|+.+.
T Consensus 279 -----------------------~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~ 335 (475)
T 3k40_A 279 -----------------------ICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHD 335 (475)
T ss_dssp -----------------------GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC--------------
T ss_pred -----------------------hCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCC
Confidence 355667778899999999999999998 566666666677788899765
Q ss_pred CCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCC
Q psy11047 510 NSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTN 589 (943)
Q Consensus 510 ~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~ 589 (943)
..+..+++.+|++++||+++++++|++++.+|.+|+++++++
T Consensus 336 ~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~-------------------------------------- 377 (475)
T 3k40_A 336 MQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRR-------------------------------------- 377 (475)
T ss_dssp -------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHH--------------------------------------
T ss_pred cCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHH--------------------------------------
Confidence 444456788999999999999999999999999999999998
Q ss_pred CcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEE
Q psy11047 590 FPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGR 669 (943)
Q Consensus 590 ~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR 669 (943)
..++|+++++.|+++|+|+++.++.+++|+|++++.+..+.++.++|+++|.++++++.+.+..++|
T Consensus 378 -------------~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 444 (475)
T 3k40_A 378 -------------HCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLR 444 (475)
T ss_dssp -------------HHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred -------------HHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence 4678999999999999999999999999999998776778999999999999999998888989999
Q ss_pred E-eecCCCCHHHHHHHHHHHHHHHHHHHH
Q psy11047 670 A-QNFTRTTNDDITRDWNEIRNTATEILA 697 (943)
Q Consensus 670 ~-v~~~~tt~edId~ll~~I~~~~~~ll~ 697 (943)
+ ++++++|++||+++++.|+++++++++
T Consensus 445 ~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 445 MAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9 688999999999999999999888764
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=2.3e-63 Score=564.81 Aligned_cols=464 Identities=47% Similarity=0.827 Sum_probs=391.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEc
Q psy11047 119 IPLIPVILVGKEMVDYIADYLENIRDRRVYPDVKPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYF 198 (943)
Q Consensus 119 ~~~e~fr~~~~~~vd~i~dyl~~~~~~pV~p~~~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~ 198 (943)
||.++||+.+++++|.+++|+++++++||++.++|+++++.++..+|++|++++++++++.+.+.++.++|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHH
Q psy11047 199 PALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAG 278 (943)
Q Consensus 199 ~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aA 278 (943)
++++++++.++++++.++|++...|..+|.++++|.++++|+++++|++..++. ...+.++|+||+|||+||++|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~-~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLA-GEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCC-TTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcc-cCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999865421 1112357999999999999999999
Q ss_pred HHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEE
Q psy11047 279 RTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF 357 (943)
Q Consensus 279 R~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~ 357 (943)
|++.+++.+...++.......++.+||+|+.+|+|+.+++. +|. .++.||+|++|+||+++|+++|+++.++|..|++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~-~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~ 238 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV-KLKAIPSDGKFAMRASALQEALERDKAAGLIPFF 238 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC-EEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC-ceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceE
Confidence 98654422110000000001125679999999999999995 555 7999999999999999999999999888888999
Q ss_pred EEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccccee
Q psy11047 358 IFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 437 (943)
Q Consensus 358 VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~V 437 (943)
|++++|+|.+|++||+++|++ +|++||+ |+|||+|||++ .+
T Consensus 239 vv~~~~~n~tG~~~~l~~I~~--------------------la~~~~~-------~lhvD~a~g~~-~~----------- 279 (486)
T 1js3_A 239 VVATLGTTSCCSFDNLLEVGP--------------------ICHEEDI-------WLHVDAAYAGS-AF----------- 279 (486)
T ss_dssp EEEEBSCTTTCCBCCHHHHHH--------------------HHHHTTC-------EEEEECTTGGG-GG-----------
T ss_pred EEEeCCCCCCCCCCCHHHHHH--------------------HHHHcCC-------EEEEehhhHHH-HH-----------
Confidence 999999999999999999999 9999999 99999999987 33
Q ss_pred eeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCcccccc
Q psy11047 438 VIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLRH 508 (943)
Q Consensus 438 cFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~ 508 (943)
.++.+++.+.|++.|||+++|+|||++ ++++..+.+.+...+.|+..
T Consensus 280 ------------------------~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~ 335 (486)
T 1js3_A 280 ------------------------ICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKH 335 (486)
T ss_dssp ------------------------GSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC--------
T ss_pred ------------------------HCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCC
Confidence 345566667788899999999999998 45555455566666788875
Q ss_pred CCC--CcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccc
Q psy11047 509 ENS--GLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKL 586 (943)
Q Consensus 509 ~~~--g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~ 586 (943)
... +...++.+|+++++||++++++|++++.+|.+|+++++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~----------------------------------- 380 (486)
T 1js3_A 336 SHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRK----------------------------------- 380 (486)
T ss_dssp ----CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
T ss_pred CcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHH-----------------------------------
Confidence 432 2345778899999999999999999999999999999988
Q ss_pred cCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCc
Q psy11047 587 QTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQG 666 (943)
Q Consensus 587 ~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~ 666 (943)
..++++++.+.|+++|+++++.++.+++++|++.+.+.++.++.++|.++|+++++++.+.+..
T Consensus 381 ----------------~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 444 (486)
T 1js3_A 381 ----------------HVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQF 444 (486)
T ss_dssp ----------------HHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEE
T ss_pred ----------------HHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEE
Confidence 3568899999999999999998889999999998655567899999999998888887788888
Q ss_pred EEEE-eecCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11047 667 LGRA-QNFTRTTNDDITRDWNEIRNTATEILAE 698 (943)
Q Consensus 667 ~lR~-v~~~~tt~edId~ll~~I~~~~~~ll~~ 698 (943)
++|+ ++++++|++||+++++.|++++.++.++
T Consensus 445 ~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 445 VLRFAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 5799999999999999999998876554
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=4.4e-60 Score=545.83 Aligned_cols=455 Identities=19% Similarity=0.260 Sum_probs=391.8
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhHhhc---CCCCCCCCCCCHHHHHHHHHHHHcCCC
Q psy11047 112 VNPQSRKIPLIPVILVGKEMVDYIADYLENIRDR--RVYPDVKPGYLRSL---VPESAPVEPEKWDTIMGDIEKVIMPGI 186 (943)
Q Consensus 112 l~p~~~~~~~e~fr~~~~~~vd~i~dyl~~~~~~--pV~p~~~p~~l~~~---l~~~lPe~G~~~e~iL~~l~~~I~~~~ 186 (943)
+.|+.. +.++++..+++++|.+++|++++.++ +|++.++|++++.. ++..+|++|++++++++++++.+.++
T Consensus 14 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~- 90 (511)
T 3vp6_A 14 LLPAKN--GEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG- 90 (511)
T ss_dssp STTSTT--CHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-
T ss_pred cCCCCC--ChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-
Confidence 566653 57999999999999999999998776 57889999999999 89999999999999999999988766
Q ss_pred CCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCC
Q psy11047 187 THWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTT 266 (943)
Q Consensus 187 ~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsG 266 (943)
.+|+||+|+||++++.+++++++++++.++|++...|..+|.++++|.++++|+++++|++.. ..+|+||+|
T Consensus 91 ~~~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~--------~~~~~~t~g 162 (511)
T 3vp6_A 91 VRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK--------DGDGIFSPG 162 (511)
T ss_dssp CCTTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS--------SCEEEEESS
T ss_pred CCCCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCC--------CCceEECCc
Confidence 557999999999999999999999999999999999999999999999999999999999853 147999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCC--ccEEEEecCCCCCcCHHHHHH
Q psy11047 267 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGL--VNMRYIESDDKLSLRGDKLIE 343 (943)
Q Consensus 267 GTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~--~~v~~Vp~D~~grmD~daLe~ 343 (943)
||+||+.||+++|+++++... .+|+.. .++.+||+|+.+|+|+.+++. +|. .+++.|++|.+|+||+++|++
T Consensus 163 gt~a~~~al~~a~~~~~~~~~--~~G~~~---~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~ 237 (511)
T 3vp6_A 163 GAISNMYSIMAARYKYFPEVK--TKGMAA---VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEA 237 (511)
T ss_dssp HHHHHHHHHHHHHHHHCTHHH--HHCGGG---SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhhhh--hcCccc---CCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHH
Confidence 999999999999986532211 123211 246789999999999999995 443 389999999999999999999
Q ss_pred HHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 344 AIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 344 aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+++..+|..|++|++++|+|.+|++|||++|++ +|++||+ |+|||+|||++
T Consensus 238 ~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~--------------------ia~~~~~-------~lhvD~a~~~~ 290 (511)
T 3vp6_A 238 KILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD--------------------ICEKYNL-------WLHVDAAWGGG 290 (511)
T ss_dssp HHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHH--------------------HHHHHTC-------EEEEEETTGGG
T ss_pred HHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHH--------------------HHHHcCC-------EEEEEccchhh
Confidence 99999888988999999999999999999999999 9999999 99999999987
Q ss_pred CccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcch
Q psy11047 424 PRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGA 494 (943)
Q Consensus 424 ~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~ 494 (943)
.+ .+++++..+.|+++|||+++|+|||++ ++++..
T Consensus 291 -~~-----------------------------------~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~ 334 (511)
T 3vp6_A 291 -LL-----------------------------------MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGI 334 (511)
T ss_dssp -GG-----------------------------------GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTH
T ss_pred -Hh-----------------------------------hChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHH
Confidence 43 467778888999999999999999987 677766
Q ss_pred hhhhcccCccccccCCC--CcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccch
Q psy11047 495 LHRTFNVEPLYLRHENS--GLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGT 572 (943)
Q Consensus 495 L~~af~~~p~YL~~~~~--g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~ 572 (943)
+...+...+.|+..... ...+++++|+++++|+++++++|++++.+|.+|+++++++
T Consensus 335 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~--------------------- 393 (511)
T 3vp6_A 335 LQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINK--------------------- 393 (511)
T ss_dssp HHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHH---------------------
T ss_pred HHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHH---------------------
Confidence 66667778899976542 3346788899999999999999999999999999999998
Q ss_pred hhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEec--CCCccEEEEEecCCC-----------
Q psy11047 573 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA--ARHLGMVVIRLLGEN----------- 639 (943)
Q Consensus 573 ~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~--~~~l~iV~Fr~~g~n----------- 639 (943)
..++|+++++.|+++|+|+++. ++.+++|+|++.+..
T Consensus 394 ------------------------------~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~ 443 (511)
T 3vp6_A 394 ------------------------------CLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRR 443 (511)
T ss_dssp ------------------------------HHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHH
T ss_pred ------------------------------HHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHH
Confidence 4678999999999999999998 689999999985421
Q ss_pred ----hHHHHHHHHHhccCcEEEeecccCC-CcEEEE-eecCCCCHHHHHHHHHHHHHHHHHHH
Q psy11047 640 ----ILTEKLLKRLNSKGRLHCVPASLRI-QGLGRA-QNFTRTTNDDITRDWNEIRNTATEIL 696 (943)
Q Consensus 640 ----~l~~~Ll~~L~~~G~~~~s~t~~~g-~~~lR~-v~~~~tt~edId~ll~~I~~~~~~ll 696 (943)
..+.++.++|.++|.+++.+....+ ..++|+ ++++.++.+||++++++|++++.++-
T Consensus 444 ~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 444 EKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 2356788999999988777554444 458999 55999999999999999999988764
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4.9e-59 Score=532.82 Aligned_cols=454 Identities=19% Similarity=0.257 Sum_probs=385.8
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhHhhc---CCCCCCCCCCCHHHHHHHHHHHHcCCC
Q psy11047 112 VNPQSRKIPLIPVILVGKEMVDYIADYLENIRDR--RVYPDVKPGYLRSL---VPESAPVEPEKWDTIMGDIEKVIMPGI 186 (943)
Q Consensus 112 l~p~~~~~~~e~fr~~~~~~vd~i~dyl~~~~~~--pV~p~~~p~~l~~~---l~~~lPe~G~~~e~iL~~l~~~I~~~~ 186 (943)
+.|+. |+.++|++.+++++|++++|++++.++ ||++.++|+++++. ++..+|++|++++++++++++.+.++.
T Consensus 11 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 88 (504)
T 2okj_A 11 LLPAK--NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGV 88 (504)
T ss_dssp STTST--TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSC
T ss_pred ccCCC--CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccC
Confidence 56777 889999999999999999999998775 49999999999999 999999999999999999988776665
Q ss_pred CCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCC
Q psy11047 187 THWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTT 266 (943)
Q Consensus 187 ~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsG 266 (943)
. ++||+|++|++++..+++++++++..++|+|...|..+|.++++|..+++|+++++|++.. ..+|+||+|
T Consensus 89 ~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~--------~~~~~~t~g 159 (504)
T 2okj_A 89 R-TGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK--------DGDGIFSPG 159 (504)
T ss_dssp C-TTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS--------SCEEEEESS
T ss_pred C-CCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCC--------CCCEEEeCC
Confidence 4 4599999999999999999999999999999999999999999999999999999999842 147999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCCc--cEEEEecCCCCCcCHHHHHH
Q psy11047 267 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGLV--NMRYIESDDKLSLRGDKLIE 343 (943)
Q Consensus 267 GTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~~--~v~~Vp~D~~grmD~daLe~ 343 (943)
||+||++|++++|++..+..+ .+|+.. .++++|++|+.+|+|+.|++. +|.+ +++.||++++|+||+++|++
T Consensus 160 gtea~~~al~~~~~~~~~~~~--~~G~~~---~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~ 234 (504)
T 2okj_A 160 GAISNMYSIMAARYKYFPEVK--TKGMAA---VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEA 234 (504)
T ss_dssp HHHHHHHHHHHHHHHHCTTHH--HHCGGG---SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhHHh--hcCccc---cCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHH
Confidence 999999999999975432111 012110 135689999999999999995 4532 89999999999999999999
Q ss_pred HHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 344 AIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 344 aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+++.++|..|.+|++++|+|.+|++||+++|++ +|++||+ |+|||+||+++
T Consensus 235 ~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~--------------------la~~~g~-------~lhvD~a~~~~ 287 (504)
T 2okj_A 235 KILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD--------------------ICEKYNL-------WLHVDAAWGGG 287 (504)
T ss_dssp HHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHH--------------------HHHHHTC-------EEEEEETTGGG
T ss_pred HHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHH--------------------HHHHcCC-------EEEEehhhhhH
Confidence 99988888878999999999999999999999999 9999999 99999999988
Q ss_pred CccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcch
Q psy11047 424 PRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGA 494 (943)
Q Consensus 424 ~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~ 494 (943)
.+ .+++++..++|++.+||+++|+|||++ ++++..
T Consensus 288 -~~-----------------------------------~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~ 331 (504)
T 2okj_A 288 -LL-----------------------------------MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGI 331 (504)
T ss_dssp -GG-----------------------------------GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTH
T ss_pred -HH-----------------------------------hCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHH
Confidence 43 355666778888899999999999988 466555
Q ss_pred hhhhcccCccccccCCC--CcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccch
Q psy11047 495 LHRTFNVEPLYLRHENS--GLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGT 572 (943)
Q Consensus 495 L~~af~~~p~YL~~~~~--g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~ 572 (943)
+...+...+.|+.+.+. +..+++.+|+++++||++++++|++++.+|.+|+++++++
T Consensus 332 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~--------------------- 390 (504)
T 2okj_A 332 LQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINK--------------------- 390 (504)
T ss_dssp HHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHH---------------------
T ss_pred HHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHH---------------------
Confidence 54455567889865432 3346788899999999999999999999999999999888
Q ss_pred hhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEec--CCCccEEEEEecCC------------
Q psy11047 573 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA--ARHLGMVVIRLLGE------------ 638 (943)
Q Consensus 573 ~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~--~~~l~iV~Fr~~g~------------ 638 (943)
..++++++++.|+++|+++++. ++..++|+|++.+.
T Consensus 391 ------------------------------~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~ 440 (504)
T 2okj_A 391 ------------------------------CLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRR 440 (504)
T ss_dssp ------------------------------HHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHH
T ss_pred ------------------------------HHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhH
Confidence 3578999999999999999997 68899999998532
Q ss_pred ---ChHHHHHHHHHhccCcEEEeecccCCC-cEEEEe-ecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 639 ---NILTEKLLKRLNSKGRLHCVPASLRIQ-GLGRAQ-NFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 639 ---n~l~~~Ll~~L~~~G~~~~s~t~~~g~-~~lR~v-~~~~tt~edId~ll~~I~~~~~~l 695 (943)
+..+..+.++|.++|.++++++.+.+. +++|++ .++.+|++||+++++.|+++++++
T Consensus 441 ~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 441 EKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 123678899999999888876666653 699995 479999999999999999887654
No 6
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.9e-58 Score=523.70 Aligned_cols=455 Identities=18% Similarity=0.230 Sum_probs=374.4
Q ss_pred ceeeecCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCC-CCCCCCCCHHHHHHHHHHHHcCCC
Q psy11047 108 KIFVVNPQSRKIPLIPVILVGKEMVDYIADYLENIRDRRVYPDVKPGYLRSLVPE-SAPVEPEKWDTIMGDIEKVIMPGI 186 (943)
Q Consensus 108 ~~~fl~p~~~~~~~e~fr~~~~~~vd~i~dyl~~~~~~pV~p~~~p~~l~~~l~~-~lPe~G~~~e~iL~~l~~~I~~~~ 186 (943)
+.+|++|+.++ .++||+.+++++|++++|+++. ++ +++.++|+++++.++. .+|++|++++++++++.+.+++++
T Consensus 20 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 95 (497)
T 2qma_A 20 KKHFIHTGELG--SAEFASVMSHTTSAMKSVFEQV-NA-PYSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNA 95 (497)
T ss_dssp GGGBCCSSTTT--THHHHHHHHHHHHHHHHHHHHC-CS-SSCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTS
T ss_pred HHhccCCCCCC--HHHHHHHHHHHHHHHHHHHhhc-cC-CCCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 56799998866 5899999999999999999987 34 4888999999999987 589999999999999999999999
Q ss_pred CCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCC
Q psy11047 187 THWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTT 266 (943)
Q Consensus 187 ~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsG 266 (943)
++|+||+|++|+.++..+++++++++..++|++...|..+|+++++|..+++|+++++|+++. ..|+||+|
T Consensus 96 ~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~---------~~~~~t~g 166 (497)
T 2qma_A 96 IFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK---------ADGIFTSG 166 (497)
T ss_dssp CCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT---------CEEEEESS
T ss_pred CCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC---------CCeEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999999753 47999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhc---ccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCCc--cEEEEecCCCCCcCHHH
Q psy11047 267 ASESTLICLLAGRTEAIRKYQ---QSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGLV--NMRYIESDDKLSLRGDK 340 (943)
Q Consensus 267 GTeANL~AL~aAR~~~l~~~~---~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~~--~v~~Vp~D~~grmD~da 340 (943)
||+||+.|+++||+++..+.. ...+|+.. ..++.+|++|+.+|+|+.+++. +|.+ +++.||++++++||+++
T Consensus 167 gt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~--~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~ 244 (497)
T 2qma_A 167 GTQSNQMGLMLARDWIADKLSGHSIQKLGLPD--YADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITK 244 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCG--GGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGG
T ss_pred chHHHHHHHHHHHHHHHHhhcccchhhccccc--ccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHH
Confidence 999999999999986543110 00012110 0135689999999999999985 5543 79999999999999999
Q ss_pred HHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhh
Q psy11047 341 LIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV 420 (943)
Q Consensus 341 Le~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~ 420 (943)
|+++|+++.++|..|++|++++|+|.+|.+||+++|++ +|++||+ |+|||+||
T Consensus 245 L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~--------------------l~~~~~~-------~l~vD~a~ 297 (497)
T 2qma_A 245 LDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIAD--------------------MAVKHDM-------WMHVDGAY 297 (497)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHH--------------------HHHHHTC-------EEEEEETT
T ss_pred HHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHH--------------------HHHHcCC-------EEEEehhh
Confidence 99999988777777889999999999999999999999 9999999 99999999
Q ss_pred cCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccC
Q psy11047 421 LGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKN 491 (943)
Q Consensus 421 GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~ 491 (943)
+++ .+ .++ +++.+.|++.+||+++|+|||++ +++
T Consensus 298 ~~~-~~-----------------------------------~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~ 340 (497)
T 2qma_A 298 GGA-LI-----------------------------------LSS-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVND 340 (497)
T ss_dssp GGG-GG-----------------------------------GST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESC
T ss_pred hHH-HH-----------------------------------hCc-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeC
Confidence 987 32 233 55667788899999999999988 455
Q ss_pred cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccc
Q psy11047 492 SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLG 571 (943)
Q Consensus 492 ~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g 571 (943)
+..+ ..+...+.|+...... .+++..++++++|+++++++|++++.+|.+|+++++++
T Consensus 341 ~~~~-~~~~~~~~yl~~~~~~-~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~-------------------- 398 (497)
T 2qma_A 341 KSNF-KFLLHHADYLNREHDE-LPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDH-------------------- 398 (497)
T ss_dssp GGGG-GGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHH--------------------
T ss_pred HHHH-HHhcCCchhcCCcccc-CCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHH--------------------
Confidence 5444 3444556787643221 24667789999999999999999999999999999988
Q ss_pred hhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCC----hHHHHHHH
Q psy11047 572 TAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGEN----ILTEKLLK 647 (943)
Q Consensus 572 ~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n----~l~~~Ll~ 647 (943)
..+++++|.+.|+++|+++++.++..++|+|++.+.+ .++..+.+
T Consensus 399 -------------------------------~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~ 447 (497)
T 2qma_A 399 -------------------------------LLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRL 447 (497)
T ss_dssp -------------------------------HHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHH
T ss_pred -------------------------------HHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHH
Confidence 3568999999999999999998899999999997642 45678889
Q ss_pred HHhccCcEEEeecccCCCcEEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q psy11047 648 RLNSKGRLHCVPASLRIQGLGRAQN-FTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 648 ~L~~~G~~~~s~t~~~g~~~lR~v~-~~~tt~edId~ll~~I~~~~~~ 694 (943)
+|.++|.++..++.+.+..++|+++ ++.+|++||+++++.|++++++
T Consensus 448 ~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 448 EALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp HHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999998877777777788999965 9999999999999999988765
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-56 Score=513.75 Aligned_cols=449 Identities=17% Similarity=0.216 Sum_probs=372.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHH-HHHhcCCC--CCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCC
Q psy11047 116 SRKIPLIPVILVGKEMVDYIAD-YLENIRDR--RVYPDVKPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQSP 192 (943)
Q Consensus 116 ~~~~~~e~fr~~~~~~vd~i~d-yl~~~~~~--pV~p~~~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sP 192 (943)
+.+|+.++|++.+++++|.+++ |++++.++ ||+|.++|++++..++..+|++|++++++++++++.+.++.. +.||
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p 109 (515)
T 2jis_A 31 SLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK-TGHP 109 (515)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC-TTST
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC-CCCC
Confidence 3458899999999999999999 99988755 999999999999999999999999999999999987766654 4599
Q ss_pred ceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH
Q psy11047 193 YMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL 272 (943)
Q Consensus 193 rf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL 272 (943)
+|++|++++..++++++++++..+|++...|..+|.++++|.++++|+++++|++. ..|+||+|||+||+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~----------~~~~~t~ggtea~~ 179 (515)
T 2jis_A 110 RFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSS----------GDGIFCPGGSISNM 179 (515)
T ss_dssp TEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSS----------CEEEEESSHHHHHH
T ss_pred CeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCC----------CCeEEcCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999984 37999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCC--ccEEEEecCCCCCcCHHHHHHHHHHhh
Q psy11047 273 ICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGL--VNMRYIESDDKLSLRGDKLIEAIERDK 349 (943)
Q Consensus 273 ~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~--~~v~~Vp~D~~grmD~daLe~aI~~d~ 349 (943)
+|+.++|++..+..+ .+|.. ..++++|++|+.+|+|+.+++. +|. .+++.||++++++||+++|+++|+++.
T Consensus 180 ~al~~ar~~~~~~~~--~~G~~---~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~ 254 (515)
T 2jis_A 180 YAVNLARYQRYPDCK--QRGLR---TLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAE 254 (515)
T ss_dssp HHHHHHHHHHCTTHH--HHCGG---GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHh--hcCcc---ccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHH
Confidence 999999976421110 01210 0235689999999999999995 453 289999999999999999999999887
Q ss_pred ccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccc
Q psy11047 350 KKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIP 429 (943)
Q Consensus 350 ~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp 429 (943)
.+|..|.+|++++|+|.+|++||+++|++ +|++||+ |+|||+||+++ .+
T Consensus 255 ~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~--------------------la~~~g~-------~l~vD~a~~~~-~~--- 303 (515)
T 2jis_A 255 AEGAVPFLVSATSGTTVLGAFDPLEAIAD--------------------VCQRHGL-------WLHVDAAWGGS-VL--- 303 (515)
T ss_dssp HTTCEEEEEEEEBSCTTTCCBCCHHHHHH--------------------HHHHHTC-------EEEEEETTGGG-GG---
T ss_pred hCCCCcEEEEEeCCCCCCCCccCHHHHHH--------------------HHHHcCC-------eEEEehhhhhH-HH---
Confidence 77877999999999999999999999999 9999999 99999999987 43
Q ss_pred cccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCc-chhhhhc
Q psy11047 430 AARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNS-GALHRTF 499 (943)
Q Consensus 430 ~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~-~~L~~af 499 (943)
.++.+++.+.|++.+||+++|+|||++ ++++ ..+...+
T Consensus 304 --------------------------------~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~ 351 (515)
T 2jis_A 304 --------------------------------LSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCH 351 (515)
T ss_dssp --------------------------------GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHH
T ss_pred --------------------------------hChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHh
Confidence 345566678888899999999999987 5665 4444455
Q ss_pred ccCccccccCCC--CcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhc
Q psy11047 500 NVEPLYLRHENS--GLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVK 577 (943)
Q Consensus 500 ~~~p~YL~~~~~--g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~ 577 (943)
...++|+.+... +..++++.++++++||++++++|++++.+|.+|+++++++
T Consensus 352 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~-------------------------- 405 (515)
T 2jis_A 352 GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQ-------------------------- 405 (515)
T ss_dssp CC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHH--------------------------
T ss_pred cCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHH--------------------------
Confidence 557789865322 2235677889999999999999999999999999998888
Q ss_pred ccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCC--------ChH-------H
Q psy11047 578 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGE--------NIL-------T 642 (943)
Q Consensus 578 ~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~--------n~l-------~ 642 (943)
..++++++++.|+++|+++++.++.+++|+|++.+. ..+ +
T Consensus 406 -------------------------~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~ 460 (515)
T 2jis_A 406 -------------------------AFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVA 460 (515)
T ss_dssp -------------------------HHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHH
T ss_pred -------------------------HHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHH
Confidence 357899999999999999999988899999998421 122 2
Q ss_pred HHHHHHHhccCcEEEeecccCC-CcEEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q psy11047 643 EKLLKRLNSKGRLHCVPASLRI-QGLGRAQN-FTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 643 ~~Ll~~L~~~G~~~~s~t~~~g-~~~lR~v~-~~~tt~edId~ll~~I~~~~~~ 694 (943)
..+.++|.++|.++++++.+.+ ..++|+++ ++.+|++||+++++.|++++++
T Consensus 461 ~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 461 PVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 3467788899988777665544 46999966 9999999999999999887643
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=3.5e-42 Score=387.53 Aligned_cols=401 Identities=12% Similarity=0.063 Sum_probs=308.6
Q ss_pred hhHhhcCCCCCCCCCCCHHHHHHHHHHHH-cCCCCCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHH
Q psy11047 154 GYLRSLVPESAPVEPEKWDTIMGDIEKVI-MPGITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTEL 232 (943)
Q Consensus 154 ~~l~~~l~~~lPe~G~~~e~iL~~l~~~I-~~~~~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateL 232 (943)
..++..++..+|++|++++++++++.+.+ .++.++|+||+|++ .. .+..+++++..++|.+...|..+|.+.++
T Consensus 8 ~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~---~~--~~~~v~e~~~~a~~~~~~~~~~~~~~~~l 82 (452)
T 2dgk_A 8 SISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ---TW--DDENVHKLMDLSINKNWIDKEEYPQSAAI 82 (452)
T ss_dssp -------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC---CC--CCHHHHHHHHHTTTCBTTCTTTCHHHHHH
T ss_pred HHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC---CC--chHHHHHHHHHHhccCCCChhhChhHHHH
Confidence 44566777899999999999999999988 78888999999886 11 12457899999999998899999999999
Q ss_pred HHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 233 EIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 233 E~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
|.++++|+++++|++...+ +...|++|+|||+||++|++++++++.++.. .+|+.. .+..|++|+ +|+
T Consensus 83 ~~~~~~~la~l~g~~~~~~-----~~~~~~~t~ggtea~~~al~a~~~~~~~~~~--~~G~~~----~~~~vi~~~-~h~ 150 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKN-----GQAVGTNTIGSSEACMLGGMAMKWRWRKRME--AAGKPT----DKPNLVCGP-VQI 150 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTT-----SCCEEEEESSHHHHHHHHHHHHHHHHHHHHH--HTTCCC----SCCEEEESS-CCH
T ss_pred HHHHHHHHHHHhCCCcccc-----cCCceEEeCCHHHHHHHHHHHHHHHHHHHHH--hcCCCC----CCcEEEECC-CcH
Confidence 9999999999999986410 0135999999999999999999875432211 122110 124677888 999
Q ss_pred HHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccc
Q psy11047 313 SVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 313 Sv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~ 391 (943)
++.+++.+.+.+++.||+++ +++||+++|+++|+++ |.+|+++.++|.+|.+||+++|++
T Consensus 151 ~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~------------- 211 (452)
T 2dgk_A 151 CWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHD------------- 211 (452)
T ss_dssp HHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHH-------------
T ss_pred HHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHH-------------
Confidence 99999965444899999986 7999999999999764 789999999999999999999999
Q ss_pred ccCchHHHHHHc------CCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccc
Q psy11047 392 LQTNFPNFILSY------FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVP 465 (943)
Q Consensus 392 L~RrfR~iar~~------Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~ 465 (943)
+|++| |+ |+|||+||+++ .. |. ..++
T Consensus 212 -------ia~~~~~~~~~~~-------~l~vD~a~~~~-~~--~~-------------------------------~~~~ 243 (452)
T 2dgk_A 212 -------ALDKFQADTGIDI-------DMHIDAASGGF-LA--PF-------------------------------VAPD 243 (452)
T ss_dssp -------HHHHHHHHHCCCC-------CEEEECTTGGG-TH--HH-------------------------------HCTT
T ss_pred -------HHHHHhhccCCCC-------cEEEEcccHHH-HH--Hh-------------------------------hCcc
Confidence 99996 99 99999999987 21 00 0111
Q ss_pred hhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHH
Q psy11047 466 ASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWF 535 (943)
Q Consensus 466 ~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~ 535 (943)
....+ .++.+||+++|+|||++ ++++..+.+.+...+.|+.. ++..++++++|++ .++++|+
T Consensus 244 ~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~r~~~~~~~~~a 315 (452)
T 2dgk_A 244 IVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGG-------QIGTFAINFSRPAGQVIAQYY 315 (452)
T ss_dssp CCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTC-------CEEECCSCCSCBCHHHHHHHH
T ss_pred chhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCC-------CCCCcccCCCChhHHHHHHHH
Confidence 11112 25689999999999986 45544343444445667642 2235678899987 8899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHh
Q psy11047 536 VIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 615 (943)
Q Consensus 536 tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~ 615 (943)
+++.+|.+|+++++++ ..++++++.+.|+
T Consensus 316 al~~lg~~g~~~~~~~---------------------------------------------------~~~~a~~l~~~L~ 344 (452)
T 2dgk_A 316 EFLRLGREGYTKVQNA---------------------------------------------------SYQVAAYLADEIA 344 (452)
T ss_dssp HHHHHHHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHH
Confidence 9999999999988888 3568899999999
Q ss_pred CCCCeEEecC----CCccEEEEEecCCC--hHH-HHHHHHHhccCcE---EEeecccCCCcEEEEeecCCCCHHHHHHHH
Q psy11047 616 GDPRFEIPAA----RHLGMVVIRLLGEN--ILT-EKLLKRLNSKGRL---HCVPASLRIQGLGRAQNFTRTTNDDITRDW 685 (943)
Q Consensus 616 ~~p~~eIl~~----~~l~iV~Fr~~g~n--~l~-~~Ll~~L~~~G~~---~~s~t~~~g~~~lR~v~~~~tt~edId~ll 685 (943)
++++++++.+ +.+++|+|++++.. .++ .++.++|.++|++ +..+..+.+..++|++++..+|++|+++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li 424 (452)
T 2dgk_A 345 KLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLL 424 (452)
T ss_dssp TTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHH
T ss_pred hCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHH
Confidence 9999999875 68999999997531 123 7889999999973 444555556779999888888899999999
Q ss_pred HHHHHHHHHHHH
Q psy11047 686 NEIRNTATEILA 697 (943)
Q Consensus 686 ~~I~~~~~~ll~ 697 (943)
+.|+++.+.+.+
T Consensus 425 ~~l~~~~~~~~~ 436 (452)
T 2dgk_A 425 EDYKASLKYLSD 436 (452)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999988766543
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-40 Score=382.59 Aligned_cols=412 Identities=13% Similarity=0.098 Sum_probs=323.1
Q ss_pred CCCCCChhhHhhcCCC-CCCCCCCCHHHHHHHHHHHHcCCCCCCCCCce-eEEccCCCChHHHHHHHHHHHHhccCcccc
Q psy11047 147 VYPDVKPGYLRSLVPE-SAPVEPEKWDTIMGDIEKVIMPGITHWQSPYM-HAYFPALNSYPSLLGDMLSDAINCLGFTWA 224 (943)
Q Consensus 147 V~p~~~p~~l~~~l~~-~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf-~g~~~~~~s~~silgd~L~~alN~n~~~~~ 224 (943)
..|...+.|++..+|. .+|++|.+++++++++++.+.. ..||++ ++.+.+.. ++..+.+++..++|.+...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t~~-~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTTW-MEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSCCC-CCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccCCC-CCHHHHHHHHHHhccCCCChh
Confidence 3455568899999998 9999999999999999988752 257875 33332222 334578889999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.+|.++++|.++++|+++++|++... +....|++|+|||+||++++++++..+.++.+. +|.. ..++.|
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~-----~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~--~G~~----~~~~~v 157 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEE-----AETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA--EGKP----VDKPNI 157 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCS-----SCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH--TTCC----CSCCEE
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccc-----ccCCcceecCcHHHHHHHHHHHHHHHHhHHHHh--cCCC----CCCcEE
Confidence 99999999999999999999998310 112478999999999999999988765443221 1210 124578
Q ss_pred EecCCCchHHHHHHHHCCccEEEEecCCC-CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 305 YCSDQAHSSVEKAGLIGLVNMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 305 ~~S~~aHySv~KAa~LG~~~v~~Vp~D~~-grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
++|+.+|+|+.+++.+.+..++.||++++ ++||+++|+++|+++ |.+|+++.++|.+|.++|+++|++
T Consensus 158 i~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~----- 226 (502)
T 3hbx_A 158 VTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLND----- 226 (502)
T ss_dssp EEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHH-----
T ss_pred EEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHH-----
Confidence 99999999999999755558999998865 999999999999865 789999999999999999999999
Q ss_pred ccccccccccCchHHHHHHc------CCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhc
Q psy11047 384 GLGFYKMKLQTNFPNFILSY------FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNS 457 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~------Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~ 457 (943)
+|+++ |+ |+|||+||+++ .. |.
T Consensus 227 ---------------ia~~~~~~~~~~~-------~l~VD~A~~~~-~~--p~--------------------------- 254 (502)
T 3hbx_A 227 ---------------LLVEKNKETGWDT-------PIHVDAASGGF-IA--PF--------------------------- 254 (502)
T ss_dssp ---------------HHHHHHHHHCCCC-------CEEEECTTGGG-TH--HH---------------------------
T ss_pred ---------------HHHHhhhccCCCC-------eEEEECCccch-hh--hh---------------------------
Confidence 99999 99 99999999977 21 00
Q ss_pred cCcccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc
Q psy11047 458 KGRLHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF 528 (943)
Q Consensus 458 ~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf 528 (943)
..+.....+ .++.+||+++++|||++ ++++..+...+...+.|+... ...+++.++|+.
T Consensus 255 ----~~~~~~~~~-~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~-------~~~~~~~~sr~~ 322 (502)
T 3hbx_A 255 ----LYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD-------QPTFTLNFSKGS 322 (502)
T ss_dssp ----HCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSC-------EEECCSCCSCBS
T ss_pred ----hCccccccc-CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCC-------CCCccccCCchH
Confidence 122222222 25689999999999995 466555545555566787542 234677889975
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 -RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 -rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
.++++|++++.+|.+||.+.+++ ..+++
T Consensus 323 ~~~~a~~~al~~lg~~g~~~~~~~---------------------------------------------------~~~~a 351 (502)
T 3hbx_A 323 SQVIAQYYQLIRLGHEGYRNVMEN---------------------------------------------------CRENM 351 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHHHH
Confidence 78999999999999999988888 46788
Q ss_pred HHHHHHHhCCCCeEEecC-CCccEEEEEecCCChH-HHHHHHHHhccCcEE---EeecccCCCcEEEEeecCCCCHHHHH
Q psy11047 608 QKFEALVLGDPRFEIPAA-RHLGMVVIRLLGENIL-TEKLLKRLNSKGRLH---CVPASLRIQGLGRAQNFTRTTNDDIT 682 (943)
Q Consensus 608 ~~l~~~L~~~p~~eIl~~-~~l~iV~Fr~~g~n~l-~~~Ll~~L~~~G~~~---~s~t~~~g~~~lR~v~~~~tt~edId 682 (943)
++|++.|+++++|+++.+ +.+++|+|++++...+ ...+.++|.++|++. ..|+...+..++|++++..+|.+|++
T Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid 431 (502)
T 3hbx_A 352 IVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAE 431 (502)
T ss_dssp HHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHH
Confidence 999999999999999987 8999999999864323 358999999999863 23344556789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy11047 683 RDWNEIRNTATEILAELA 700 (943)
Q Consensus 683 ~ll~~I~~~~~~ll~~~~ 700 (943)
.+++.|+++.+.+.+...
T Consensus 432 ~li~~L~~~l~~l~~~~~ 449 (502)
T 3hbx_A 432 RLVIDIEKVMRELDELPS 449 (502)
T ss_dssp HHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHhCcc
Confidence 999999998877655433
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-35 Score=330.21 Aligned_cols=433 Identities=16% Similarity=0.164 Sum_probs=305.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCceeEEccCCC-ChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHH
Q psy11047 162 ESAPVEPEKWDTIMGDIEKVIMP-GITHWQSPYMHAYFPALN-SYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNW 239 (943)
Q Consensus 162 ~~lPe~G~~~e~iL~~l~~~I~~-~~~~~~sPrf~g~~~~~~-s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~w 239 (943)
..+|++|.+.+++++++.+.... ...+|.+|+|+|+++.+. ....++.+.+....+.|...|..+|...++|.++.+|
T Consensus 36 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 115 (497)
T 3mc6_A 36 PQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSM 115 (497)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHH
Confidence 47899999999999999987753 567899999999876654 2334455555555555778899999999999999999
Q ss_pred HHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH
Q psy11047 240 LGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL 319 (943)
Q Consensus 240 La~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~ 319 (943)
+++++|++.. ...+++|+|||+||..++.++|++..++ +|+ .+..|+++..+|+++.+++.
T Consensus 116 la~~~g~~~~--------~~~~~~~~ggt~a~~~a~~a~~~~~~~~-----~g~------~~~~Vi~~~~~h~~~~~~~~ 176 (497)
T 3mc6_A 116 VLRMFNAPSD--------TGCGTTTSGGTESLLLACLSAKMYALHH-----RGI------TEPEIIAPVTAHAGFDKAAY 176 (497)
T ss_dssp HHHHTTCCTT--------TCCEEEESSHHHHHHHHHHHHHHHHHHH-----SCC------SSCEEEEETTSCHHHHHHHH
T ss_pred HHHHhCCCCC--------CCeEEEcCcHHHHHHHHHHHHHHHHHhc-----CCC------CCceEEEeCCccHHHHHHHH
Confidence 9999999822 1479999999999999999998764321 232 23468899999999999996
Q ss_pred HCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHH
Q psy11047 320 IGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPN 398 (943)
Q Consensus 320 LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~ 398 (943)
+.+.+++.||+++ ++++|+++|+++|+++ +.+|+++.+++.+|.++|+++|++
T Consensus 177 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~-------------------- 230 (497)
T 3mc6_A 177 YFGMKLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGK-------------------- 230 (497)
T ss_dssp HSCCEEEEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTT--------------------
T ss_pred HcCCeEEEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHH--------------------
Confidence 5455899999987 8999999999998754 789999999999999999999999
Q ss_pred HHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeE
Q psy11047 399 FILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQN 478 (943)
Q Consensus 399 iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADS 478 (943)
+|++||+ |+|||+||+++ .+ ++. +..|.-.++++.... ..+|+
T Consensus 231 la~~~g~-------~livD~a~~~~-~~--~f~------------------------~~~~~~~~~~~~~~~---~g~d~ 273 (497)
T 3mc6_A 231 IAQKYKL-------PLHVDSCLGSF-IV--SFM------------------------EKAGYKNLPLLDFRV---PGVTS 273 (497)
T ss_dssp HHHHTTC-------CEEEETTTTHH-HH--GGG------------------------TTTTCCSCCCCSTTS---TTCCE
T ss_pred HHHHhCC-------EEEEECcchhh-hh--hhh------------------------hhhcccCCccccccC---CCCcE
Confidence 9999999 99999999875 21 100 000000122233222 35799
Q ss_pred EEEcCCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHHHHHHHHHHHHHHH
Q psy11047 479 FTIVPSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWFVIRNFGIKGLQKH 548 (943)
Q Consensus 479 ItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~tLr~~G~~Gl~~~ 548 (943)
+++++|||++ ++++......+...+.|+.. .++..++.++|.. ..+.+|++++.+|..|+.++
T Consensus 274 ~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~ 346 (497)
T 3mc6_A 274 ISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG-------LYGSPTLAGSRPGAIVVGCWATMVNMGENGYIES 346 (497)
T ss_dssp EEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS-------CBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC-------CcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHH
Confidence 9999999985 33332211111222223221 1234556666543 35679999999999999988
Q ss_pred HHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhC-CCCeEEecCCC
Q psy11047 549 IREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG-DPRFEIPAARH 627 (943)
Q Consensus 549 I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~-~p~~eIl~~~~ 627 (943)
+++ ..++++++.+.|.+ +|+++++.++.
T Consensus 347 ~~~---------------------------------------------------~~~~~~~l~~~L~~~~~g~~~~~~~~ 375 (497)
T 3mc6_A 347 CQE---------------------------------------------------IVGAAMKFKKYIQENIPDLDIMGNPR 375 (497)
T ss_dssp HHH---------------------------------------------------HHHHHHHHHHHHHHSCTTCEECSCCC
T ss_pred HHH---------------------------------------------------HHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 888 35678889999988 79999998899
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATEILAELAEETQRVQ 707 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ll~~~~~~~~~~~ 707 (943)
.++++|+..+.+ ..++.++|.++|+. +.. ...+..+|+.+. .+|.++++++++.|+++.+++.+...
T Consensus 376 ~~~v~~~~~~~~--~~~l~~~L~~~Gi~-v~~--~~~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~~~~------- 442 (497)
T 3mc6_A 376 YSVISFSSKTLN--IHELSDRLSKKGWH-FNA--LQKPVALHMAFT-RLSAHVVDEICDILRTTVQELKSESN------- 442 (497)
T ss_dssp SSEEEEECTTTT--HHHHHHHHHTTTCB-CEE--CCSSCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTCC---------
T ss_pred eeEEEEeCCCCC--HHHHHHHHHhCCEE-Eec--CCCCCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHhCcC-------
Confidence 999999986543 57888999999864 332 223446899555 67899999999999988765432210
Q ss_pred ccccccccccccccccccccccccccCCCCccchhccchhhhccchh
Q psy11047 708 VTKRTRVPLKETKGRNALFGSSLLLANSPMSPKIMNGSFAAVFDADE 754 (943)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (943)
. + +...++.+-||++--..-..++.++...+++.+|.+..
T Consensus 443 --~----~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (497)
T 3mc6_A 443 --S----K-PSPDGTSALYGVAGSVKTAGVADKLIVGFLDALYKLGP 482 (497)
T ss_dssp ----------------------------CCTHHHHHHHHHTTCC---
T ss_pred --c----C-CCCCCCCccccccccCCChHHHHHHHHHHHHHHccCCC
Confidence 0 0 12456788899876655578899999999999998654
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=6e-34 Score=326.01 Aligned_cols=428 Identities=14% Similarity=0.132 Sum_probs=322.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEccCC-CChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHH
Q psy11047 162 ESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYFPAL-NSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWL 240 (943)
Q Consensus 162 ~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~~~~-~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wL 240 (943)
..+|++|.+.+++++++.+.+.++..+|.+|+|+|++... ..++..+.+.+....+.|...+..+|...++|.++.+|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 4688999999999999999888888889999999997654 456678889898888999999999999999999999999
Q ss_pred HHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHH
Q psy11047 241 GKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLI 320 (943)
Q Consensus 241 a~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~L 320 (943)
++++|++.. ....+|+||+|||+||..++.++|....++ .| ..+..|+++..+|+++.+++.+
T Consensus 149 a~~~g~~~~------~~~v~~~~t~ggt~a~~~al~a~~~~g~~~-----~g------~~~d~Vi~~~~~~~~~~~~~~~ 211 (514)
T 3mad_A 149 AHMLGGDAA------GGTVCGTVTSGGTESLLLAMKTYRDWARAT-----KG------ITAPEAVVPVSAHAAFDKAAQY 211 (514)
T ss_dssp HHHTTGGGG------TSCCEEEEESSHHHHHHHHHHHHHHHHHHH-----HC------CSSCEEEEETTSCTHHHHHHHH
T ss_pred HHHcCCCCc------cCCcceEEcCcHHHHHHHHHHHHHHHhhhh-----cC------CCCCeEEEeCccchHHHHHHHH
Confidence 999999831 011467999999999999999998653221 11 1234688999999999999954
Q ss_pred CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHH
Q psy11047 321 GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFI 400 (943)
Q Consensus 321 G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~ia 400 (943)
.+..++.|+++++++||+++|+++|+++ +.+|+++.+++.+|.++|+++|++ +|
T Consensus 212 ~G~~v~~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~--------------------la 265 (514)
T 3mad_A 212 FGIKLVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAA--------------------LA 265 (514)
T ss_dssp HTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHH--------------------HH
T ss_pred cCCeeEEeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHH--------------------HH
Confidence 3347999999999999999999999754 788999999999999999999999 99
Q ss_pred HHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEE
Q psy11047 401 LSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFT 480 (943)
Q Consensus 401 r~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSIt 480 (943)
++||+ |+|+|+||+++ .+ +. +...|. ..+.+.... ..+|+++
T Consensus 266 ~~~~i-------~livDea~~~~-~~--~~------------------------~~~~g~-~~~~~~~~~---~g~d~~~ 307 (514)
T 3mad_A 266 AEHGI-------GCHVDACLGGF-IL--PW------------------------AERLGY-PVPPFDFRL---EGVTSVS 307 (514)
T ss_dssp HHHTC-------EEEEECTTTTT-TH--HH------------------------HHHTTC-CCCCCSTTS---TTCCEEE
T ss_pred HHhCC-------eEEEecccccc-cc--hh------------------------HHhcCC-CCCcccccC---CCCcEEE
Confidence 99999 99999999987 32 10 000111 012232222 3569999
Q ss_pred EcCCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHHHHHHHHHHHHHHHHH
Q psy11047 481 IVPSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWFVIRNFGIKGLQKHIR 550 (943)
Q Consensus 481 iDpHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~tLr~~G~~Gl~~~I~ 550 (943)
+++|||++ +++.......+...+.|. +. .+..+++.++|.. ..+++|++++.+|..++.+.++
T Consensus 308 ~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~ 380 (514)
T 3mad_A 308 ADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWP-----GG--LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATR 380 (514)
T ss_dssp ECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCT-----TC--SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECchhccCCCCCeEEEEEeCHHHhccccccccccC-----CC--cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999966 333322211111111111 11 1234566777764 4679999999999999998888
Q ss_pred HHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccE
Q psy11047 551 EIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGM 630 (943)
Q Consensus 551 ~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~i 630 (943)
+ ..++++++.+.|++.|+++++.++ .++
T Consensus 381 ~---------------------------------------------------~~~~~~~l~~~L~~~~g~~~~~~~-~~~ 408 (514)
T 3mad_A 381 R---------------------------------------------------ILQAADRLKAGVRAIPSLKILGDP-LWV 408 (514)
T ss_dssp H---------------------------------------------------HHHHHHHHHHHHHTSTTCEESSCC-SSE
T ss_pred H---------------------------------------------------HHHHHHHHHHHHhhCCCeEEeCCC-eEE
Confidence 8 346788999999999999998766 568
Q ss_pred EEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEE-eecCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q psy11047 631 VVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRA-QNFTRTTNDDITRDWNEIRNTATEILAELAEETQRVQVT 709 (943)
Q Consensus 631 V~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~-v~~~~tt~edId~ll~~I~~~~~~ll~~~~~~~~~~~~~ 709 (943)
+.|+..+.+ ..++.++|.++|++. .. ......+|+ +.++.+++++|+++++.|+++.+++.++..
T Consensus 409 ~~~~~~~~~--~~~l~~~L~~~Gi~v-~g--~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~~--------- 474 (514)
T 3mad_A 409 IAVASDELN--IYQVMEEMAGRGWRL-NG--LHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHPE--------- 474 (514)
T ss_dssp EEEECSSSC--HHHHHHHHHTTTCBC-EE--ETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCTT---------
T ss_pred EEEeCCCCC--HHHHHHHHHhcCCEe-cc--CCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCCC---------
Confidence 888875543 468889999998653 32 233568999 556888889999999999988776543211
Q ss_pred ccccccccccccccccccccccccCCCCccchhccchhhhccc
Q psy11047 710 KRTRVPLKETKGRNALFGSSLLLANSPMSPKIMNGSFAAVFDA 752 (943)
Q Consensus 710 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (943)
. ..+.++.||++-- .|..++.+++.++.+++|+-
T Consensus 475 -------~-~~~~~~~yg~~~~-~~~~~~~~~~~~~~~~~~~~ 508 (514)
T 3mad_A 475 -------K-ATGMAPVYGMAAA-APPELVRQVLTGFIDLLYEV 508 (514)
T ss_dssp -------C-CCTTHHHHHHHHH-SCHHHHHHHHHHHHHHHTCC
T ss_pred -------C-CCCceehhhhccc-CCHHHHHHHHHHHHHHHHHH
Confidence 0 1567899999553 34588889999999999973
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.97 E-value=2.2e-31 Score=304.01 Aligned_cols=368 Identities=13% Similarity=0.049 Sum_probs=257.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCC-----------------CCceeEEccCCCChHHHHHHHHHHHHhccCcccc
Q psy11047 162 ESAPVEPEKWDTIMGDIEKVIMPGITHWQ-----------------SPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWA 224 (943)
Q Consensus 162 ~~lPe~G~~~e~iL~~l~~~I~~~~~~~~-----------------sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~ 224 (943)
..+|++|.+-++|...|.+.-...+.+|. .||||||+++. +++||++.. |. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 37899999999999999886554555553 36899999986 456788877 44 889
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChH-HHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGT-eANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
.+|....+|..++.|+.+++|+|.. .+|++++||| +++.++|.+||.+. ++ .+.
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~---------~~~~lV~GaT~~~~a~~L~aar~~~--------~~-------~~~- 146 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV---------ASCFVVPMATGMSLTLCFLTLRHKR--------PK-------AKY- 146 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC---------CEEEEESSCHHHHHHHHHHHHHHHC--------TT-------CCE-
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC---------ceEEEECCHHHHHHHHHHHHcchhh--------cC-------CCE-
Confidence 9999999999999999999999976 4689999998 88999999888631 11 133
Q ss_pred EEecCCCchHHHHHHHH-CCc--cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 304 AYCSDQAHSSVEKAGLI-GLV--NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 304 V~~S~~aHySv~KAa~L-G~~--~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
|+++..+|.|+.||+.+ |.. .+..++.++.+.||+++|+++|+++... .+++|++|.+++.+|++|||++|++
T Consensus 147 viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~--~~~~Vv~t~t~~g~g~~ddl~~Ia~-- 222 (450)
T 3bc8_A 147 IIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTACFAPRVPDRLEELAV-- 222 (450)
T ss_dssp EEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESSCCTTBCCCCHHHHHH--
T ss_pred EEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCC--CEEEEEEECCcCCCceecCHHHHHH--
Confidence 44456799999999965 543 2333444778999999999999987532 3789999999998999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCc
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGR 460 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~ 460 (943)
+|++||+ |+|||+|||+...+
T Consensus 223 ------------------ia~~~gi-------~l~VD~A~G~~~~~---------------------------------- 243 (450)
T 3bc8_A 223 ------------------ICANYDI-------PHVVNNAYGLQSSK---------------------------------- 243 (450)
T ss_dssp ------------------HHHHHTC-------CEEEECTTTTTCHH----------------------------------
T ss_pred ------------------HHHHCCC-------eEEEECCCchhhhh----------------------------------
Confidence 9999999 99999999987222
Q ss_pred ccccchhhhhcCCCCeeEEEEcCCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchH
Q psy11047 461 LHCVPASLRIQGLGRAQNFTIVPSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRAL 531 (943)
Q Consensus 461 ~~~p~~r~~l~Gie~ADSItiDpHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrAL 531 (943)
..+..+..++. ++||+++.|+||||+ +|++..+... ...|... +. ...++
T Consensus 244 -~~~l~~~a~~~-~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~---~~~~~g~--------------~s--~SpsL 302 (450)
T 3bc8_A 244 -CMHLIQQGARV-GRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI---SKMYPGR--------------AS--ASPSL 302 (450)
T ss_dssp -HHHHHHHHHHH-SCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH---HHHSCSC--------------BC--SHHHH
T ss_pred -hHhHHHHHhcc-cCCCEEEECCccCCCchhccEEEEecCHHHHHHH---HHHhhcC--------------Cc--ccHHH
Confidence 00000111111 689999999999999 3444433221 1123211 00 11259
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHH
Q psy11047 532 KLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFE 611 (943)
Q Consensus 532 klW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~ 611 (943)
++|++++.+|.+||++.+++ .+++|++++
T Consensus 303 ~l~~~l~~~G~~g~~~~i~~---------------------------------------------------~~~~a~~l~ 331 (450)
T 3bc8_A 303 DVLITLLSLGCSGYRKLLKE---------------------------------------------------RKEMFVYLS 331 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHHHHHHHH
Confidence 99999999999999999998 457888999
Q ss_pred HHHhCCC---CeEEecCCCccE-EEEEecCC----ChHHHHHHHHHhcc---CcEEE-------------ee----cccC
Q psy11047 612 ALVLGDP---RFEIPAARHLGM-VVIRLLGE----NILTEKLLKRLNSK---GRLHC-------------VP----ASLR 663 (943)
Q Consensus 612 ~~L~~~p---~~eIl~~~~l~i-V~Fr~~g~----n~l~~~Ll~~L~~~---G~~~~-------------s~----t~~~ 663 (943)
+.|++++ ++.++..+..++ .++.+... +....+|.-.+... |.-.. .. ...-
T Consensus 332 ~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~ 411 (450)
T 3bc8_A 332 TQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNY 411 (450)
T ss_dssp HHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCC
T ss_pred HHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecC
Confidence 9998888 888887654433 23433311 11233444444333 32221 10 0112
Q ss_pred CCcEEEEeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11047 664 IQGLGRAQNFTRTTNDDITRDWNEIRNTATEILAE 698 (943)
Q Consensus 664 g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ll~~ 698 (943)
+...+=+.++...+++|++++++.|+++.....++
T Consensus 412 ~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 412 PCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp SSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 34456668899999999999999999987665444
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=2.4e-29 Score=284.75 Aligned_cols=388 Identities=11% Similarity=0.043 Sum_probs=263.0
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCC-
Q psy11047 112 VNPQSRKIPLIPVILVGKEMVDYIADYLENIRDRRVYPDVKPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQ- 190 (943)
Q Consensus 112 l~p~~~~~~~e~fr~~~~~~vd~i~dyl~~~~~~pV~p~~~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~- 190 (943)
|+...+.+=...|.+.++++++...++++++-. ...+|++|.+.+++.+.+.+........|-
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~~~yld 85 (456)
T 2z67_A 22 LDFNIEGLIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDTDKDPK 85 (456)
T ss_dssp BCCCCCSSSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBGGGCTT
T ss_pred cChhhhccCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhcccccccc
Confidence 444455565789999999999988888776211 135788899999998887775443222221
Q ss_pred ----------------CCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccC
Q psy11047 191 ----------------SPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTK 254 (943)
Q Consensus 191 ----------------sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~ 254 (943)
+|+|++|+++.. ..+++ +..|. .|..+|.+.++|..+.+|+++++|++.
T Consensus 86 ~aa~~~~~~~v~~a~~~~~~~~~~~~~~----~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~------ 150 (456)
T 2z67_A 86 SVRIGEREARTYSKIHEELSSGFCHGIG----RSGNL----VDPQP-KASGASIMYALTNKILESFFKQLGLNV------ 150 (456)
T ss_dssp CEECSSCCCCCSCHHHHHHTTTCTTCBS----BTTBT----TSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC------
T ss_pred ccccccccccccccccCccccccCCCcc----HHHHH----HhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC------
Confidence 111222222211 11111 11222 566777899999999999999999964
Q ss_pred cCCCCcEEEcCChH-HHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEec---
Q psy11047 255 VDSPGGGVLQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIES--- 330 (943)
Q Consensus 255 ~~~~~~GvfTsGGT-eANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~--- 330 (943)
. ++||+||| ++|+.++.++|... + ++ .|+++..+|+|+.+++...+..++.|+.
T Consensus 151 ----~-~~~t~g~te~a~~~al~~~~~~~--------~--------~~-~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~ 208 (456)
T 2z67_A 151 ----H-AIATPISTGMSISLCLSAARKKY--------G--------SN-VVIYPYASHKSPIKAVSFVGMNMRLVETVLD 208 (456)
T ss_dssp ----E-EEEESSCHHHHHHHHHHHHHHHH--------C--------CC-EEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred ----C-EEEeCcHHHHHHHHHHHHHHHhc--------C--------CC-EEEEECCCcHHHHHHHHHcCCCceEEEEecc
Confidence 2 89999999 57777888766421 1 12 3555666999999998643446777665
Q ss_pred CCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCcc
Q psy11047 331 DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSV 410 (943)
Q Consensus 331 D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l 410 (943)
+++|.+|+++|+++|+.+..++ .+.+|+.+.+++.+|.++|+++|++ +|+++|+
T Consensus 209 ~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~--------------------la~~~g~----- 262 (456)
T 2z67_A 209 GDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAK--------------------ICENYDI----- 262 (456)
T ss_dssp TTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHH--------------------HHHHHTC-----
T ss_pred CCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHH--------------------HHHHcCC-----
Confidence 7889999999999994321122 3788889999999999999999999 9999999
Q ss_pred chhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC--
Q psy11047 411 RLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR-- 488 (943)
Q Consensus 411 ~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-- 488 (943)
|+|||+||++. .+ | .++.....+.+ .+|++++++|||++
T Consensus 263 --~v~vD~A~~~~-~~--------g--------------------------~~~~~~~~~~~--~~D~~~~s~hK~~~~p 303 (456)
T 2z67_A 263 --PHIINGAYAIQ-NN--------Y--------------------------YLEKLKKAFKY--RVDAVVSSSDKNLLTP 303 (456)
T ss_dssp --CEEEECTTTTT-CH--------H--------------------------HHHHHHHHHTS--CCSEEEEEHHHHHCCC
T ss_pred --cEEEECcchHH-HH--------H--------------------------hhHHHHHhhCC--CCCEEEEcCCCCcCCC
Confidence 99999999877 22 0 11222223333 68999999999876
Q ss_pred -------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q psy11047 489 -------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIRNFGIKGLQKHIREIFSGLALPA 560 (943)
Q Consensus 489 -------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~ 560 (943)
+|++..+. .+ .+.|++ .+. ..++.+|.++..+|..|+.+.+++
T Consensus 304 ~g~G~l~~~~~~~~~-~l--~~~~~g-----------------~~~~~~~~~~~aal~~l~~~~~~~~~~~--------- 354 (456)
T 2z67_A 304 IGGGLVYSTDAEFIK-EI--SLSYPG-----------------RASATPVVNTLVSLLSMGSKNYLELVKN--------- 354 (456)
T ss_dssp SSCEEEEESCHHHHH-HH--HTTSCS-----------------CBCSHHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CCeEEEEEcCHHHHh-hc--CcCCCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 22322221 11 222321 111 127889999999999999888877
Q ss_pred ccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCC---CeEEecCCCccEEEEEecC
Q psy11047 561 FLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDP---RFEIPAARHLGMVVIRLLG 637 (943)
Q Consensus 561 ~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p---~~eIl~~~~l~iV~Fr~~g 637 (943)
..++++++.+.|++.| ++.++.+. ++|+|++..
T Consensus 355 ------------------------------------------~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~ 390 (456)
T 2z67_A 355 ------------------------------------------QKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISV 390 (456)
T ss_dssp ------------------------------------------HHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEEC
T ss_pred ------------------------------------------HHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEec
Confidence 3467888888888875 76666544 999999832
Q ss_pred CChHHHHHHHHHhccCc--EEEe---------ecccCCCcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 638 ENILTEKLLKRLNSKGR--LHCV---------PASLRIQGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 638 ~n~l~~~Ll~~L~~~G~--~~~s---------~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
.+ ....+.++|.++|. +-+. +......+++|++++..+|++||+++++.|+++
T Consensus 391 ~~-~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 391 NS-DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp SS-CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cc-HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 11 14567777777763 1121 000112468999999999999999999998764
No 14
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=6e-27 Score=252.69 Aligned_cols=382 Identities=15% Similarity=0.089 Sum_probs=276.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHH
Q psy11047 163 SAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGK 242 (943)
Q Consensus 163 ~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~ 242 (943)
.+|+.|.+.+++++++.+.. +...+|.+|+|+|+.++++. |.+ .+.+...+..+...+...|...+++.++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVL-PIT-RKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCC-THH-HHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCc-HHH-HHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57899999999999999865 55677889999999977654 343 4555556655545555667889999999999999
Q ss_pred HhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCC
Q psy11047 243 MIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL 322 (943)
Q Consensus 243 LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~ 322 (943)
++|.+.. ..++|+|||+||..++.+++..+..+.. .+.. ..+...|+++..+|+++.+++...+
T Consensus 81 ~~~~~~~----------~i~~~~ggt~a~~~~~~~~~~~~~~~~~---~~~~---~~~gd~vl~~~~~~~~~~~~~~~~g 144 (397)
T 3f9t_A 81 LLNNKDA----------YGHIVSGGTEANLMALRCIKNIWREKRR---KGLS---KNEHPKIIVPITAHFSFEKGREMMD 144 (397)
T ss_dssp HTTCTTC----------EEEEESCHHHHHHHHHHHHHHHHHHHHH---TTCC---CCSSCEEEEETTCCTHHHHHHHHHT
T ss_pred HhCCCCC----------CEEEecCcHHHHHHHHHHHHHHHHhhhh---hccc---CCCCeEEEECCcchhHHHHHHHHcC
Confidence 9999754 6899999999999999988765322110 1110 0123468889999999999885434
Q ss_pred ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHH
Q psy11047 323 VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILS 402 (943)
Q Consensus 323 ~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~ 402 (943)
.+++.||.++++.+|+++|+++|++. .+.+|+.+.+++.+|.++|+++|.+ +|++
T Consensus 145 ~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~--------------------l~~~ 199 (397)
T 3f9t_A 145 LEYIYAPIKEDYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSK--------------------IAKE 199 (397)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHH--------------------HHHH
T ss_pred ceeEEEeeCCCCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHH--------------------HHHH
Confidence 48999999999999999999999873 1678888889999999999999999 9999
Q ss_pred cCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEc
Q psy11047 403 YFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIV 482 (943)
Q Consensus 403 ~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiD 482 (943)
||+ |+|+|++|+++ .+ +.... +. .+ .| ...... +. . .+|+++++
T Consensus 200 ~~~-------~li~Dea~~~~-~~--~~~~~-~~---~~----------------~~--~~~~~~--~~-~-~~~~~~~s 243 (397)
T 3f9t_A 200 NNI-------YIHVDAAFGGL-VI--PFLDD-KY---KK----------------KG--VNYKFD--FS-L-GVDSITID 243 (397)
T ss_dssp HTC-------EEEEECTTGGG-TG--GGCCG-GG---CC----------------TT--CCCCCS--GG-G-TCSEEECC
T ss_pred hCC-------eEEEEccccch-hh--hhccc-cc---cc----------------cc--cccccc--cc-c-cCCeEEEc
Confidence 999 99999999876 22 10000 00 00 00 000111 11 1 57999999
Q ss_pred CCCccC---------ccCcchhhhhcccCccccccCCCCcccccCccccCCCCC-cchHHHHHHHHHHHHHHHHHHHHHH
Q psy11047 483 PSSLLR---------VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIRNFGIKGLQKHIREI 552 (943)
Q Consensus 483 pHK~L~---------vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr~~G~~Gl~~~I~~~ 552 (943)
+||+++ ++++. +...+....+|+... ...++.+++. ...+.+|.+++.++..++.+++++.
T Consensus 244 ~~K~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 314 (397)
T 3f9t_A 244 PHKMGHCPIPSGGILFKDIG-YKRYLDVDAPYLTET--------RQATILGTRVGFGGACTYAVLRYLGREGQRKIVNEC 314 (397)
T ss_dssp TTTTTCCCSSCEEEEESSGG-GGGGTCEECTTSSSS--------EECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCceEEEEeCHH-HHHhhccCCccccCC--------CccccccccccchHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999996 23322 112222223344321 1223445654 4567889999999888888888873
Q ss_pred HhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEE
Q psy11047 553 FSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVV 632 (943)
Q Consensus 553 l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~ 632 (943)
.++++++.+.|++. +++++.++..++++
T Consensus 315 ---------------------------------------------------~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 342 (397)
T 3f9t_A 315 ---------------------------------------------------MENTLYLYKKLKEN-NFKPVIEPILNIVA 342 (397)
T ss_dssp ---------------------------------------------------HHHHHHHHHHHHHT-TCCBSSCCSSSEEE
T ss_pred ---------------------------------------------------HHHHHHHHHHHHHC-CCEEEcCCCccEEE
Confidence 35677788888877 88888888999999
Q ss_pred EEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy11047 633 IRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTA 692 (943)
Q Consensus 633 Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~ 692 (943)
|+..+ ...+.+.|.++|. ++.+. ..+.++|++++..+++++++++++.|+++.
T Consensus 343 ~~~~~----~~~~~~~l~~~gi-~v~~~--~~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 343 IEDED----YKEVCKKLRDRGI-YVSVC--NCVKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp EECTT----HHHHHHHHHHTTC-BCEEC--SSSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred EEeCC----HHHHHHHHHhCCe-EEecc--CCCCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 99864 5678888888885 34442 225799999889999999999999998764
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.90 E-value=1e-21 Score=223.44 Aligned_cols=377 Identities=12% Similarity=0.072 Sum_probs=246.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEccCCCChHHHHHHHHHHHHhccCcccc-CChhHHHHHHHHHHHH
Q psy11047 162 ESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWA-SSPACTELEIITMNWL 240 (943)
Q Consensus 162 ~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~-~SPaateLE~~Vi~wL 240 (943)
-.+| +.+..++++.+.++-..+...+.+..|+| -......|.++..+.....+-+..... .++...+++.++.+|+
T Consensus 40 ~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l 116 (474)
T 1wyu_B 40 PRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYL 116 (474)
T ss_dssp CCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHH
T ss_pred CCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHH
Confidence 3577 78888999999887665544445666776 222233456665555442222222222 5788899999999999
Q ss_pred HHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHH
Q psy11047 241 GKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLI 320 (943)
Q Consensus 241 a~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~L 320 (943)
++++|++. ..++|+|||+|++.|++++|..... +|.. ..+..|++++.+|.+..+++.+
T Consensus 117 a~~~g~~~-----------~~~~~~ggt~a~~~al~~~~~~~~~------~Gd~----~~r~~Vlv~~~~h~~~~~~~~~ 175 (474)
T 1wyu_B 117 KALTGMDA-----------ITLEPAAGAHGELTGILIIRAYHED------RGEG----RTRRVVLVPDSAHGSNPATASM 175 (474)
T ss_dssp HHHHTCSE-----------EECCCSSHHHHHHHHHHHHHHHHHH------TTCT----TTCCEEEEETTSCTHHHHHHHH
T ss_pred HHHHCCCc-----------eeecChHHHHHHHHHHHHHHHHHHh------cCCc----cCCCEEEEeCCcChhhHHHHHH
Confidence 99999964 3678999999999999998865332 2210 1234678889999999998865
Q ss_pred CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc-ccHHHhhhhccccccccccccccCchHHH
Q psy11047 321 GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV-DSYCCLGTAMIVKGLGFYKMKLQTNFPNF 399 (943)
Q Consensus 321 G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI-DpL~eIa~~~~~~d~~~~~i~L~RrfR~i 399 (943)
.+.+++.|+++++|.+|+++|+++|+++ +.+|+.+..+ .+|.+ +|+++|++ +
T Consensus 176 ~G~~vv~v~~~~~~~~d~~~L~~~i~~~------t~~v~~~~pn-~~G~~~~~l~~i~~--------------------l 228 (474)
T 1wyu_B 176 AGYQVREIPSGPEGEVDLEALKRELGPH------VAALMLTNPN-TLGLFERRILEISR--------------------L 228 (474)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHCSTT------EEEEEECSSC-TTSCCCTTHHHHHH--------------------H
T ss_pred CCCEEEEecCCCCCCcCHHHHHHhhCCC------ceEEEEECCC-CCcccCCCHHHHHH--------------------H
Confidence 4458999999989999999999999754 5677777765 59999 89999999 9
Q ss_pred HHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEE
Q psy11047 400 ILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNF 479 (943)
Q Consensus 400 ar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSI 479 (943)
|++||+ |+|+|++|+.. .+ | ..+. .. + .+|.+
T Consensus 229 ~~~~g~-------~li~Dea~~~~-~~--------g--------------------------~~~~-~~-~----g~di~ 260 (474)
T 1wyu_B 229 CKEAGV-------QLYYDGANLNA-IM--------G--------------------------WARP-GD-M----GFDVV 260 (474)
T ss_dssp HHHHTC-------EEEEEGGGGGG-TT--------T--------------------------TCCH-HH-H----TCSEE
T ss_pred HHHcCC-------EEEEeCchhhh-hc--------c--------------------------CCCc-cc-C----CCcEE
Confidence 999999 99999999754 21 0 0111 11 1 47999
Q ss_pred EEcCCCccCccC------cchh-h-hhc-c-cCccccccCCCCcccccCccccCCC-C--------CcchHHHHHHHHHH
Q psy11047 480 TIVPSSLLRVKN------SGAL-H-RTF-N-VEPLYLRHENSGLAIDYMHWQIPLS-K--------RFRALKLWFVIRNF 540 (943)
Q Consensus 480 tiDpHK~L~vr~------~~~L-~-~af-~-~~p~YL~~~~~g~~~d~~~~tie~S-R--------rfrALklW~tLr~~ 540 (943)
++++||+++... -+.+ . ..+ . ....++... |..+.+ .++.+.+ | .....+.|..++.+
T Consensus 261 ~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 261 HLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERG--EEGFYL-DFDRPKSIGRVRSFYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp ECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEEC--SSCEEE-ECCCTTCCCCSSSTTSCHHHHHHHHHHHHHH
T ss_pred EEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeecc--CCeeEe-cccCcccCcccccCcCcHHHHHHHHHHHHHH
Confidence 999999887431 1111 0 000 0 010111100 000000 0011100 1 12245678888888
Q ss_pred HHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCe
Q psy11047 541 GIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF 620 (943)
Q Consensus 541 G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~ 620 (943)
|.+++.+.+++. .++++++.+.|++. ++
T Consensus 338 g~~~l~~~~~~~---------------------------------------------------~~~~~~l~~~L~~~-g~ 365 (474)
T 1wyu_B 338 GLEGLKKAAALA---------------------------------------------------VLNARYLKELLKEK-GY 365 (474)
T ss_dssp HHHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHhhc-Cc
Confidence 988888777772 45677777777776 77
Q ss_pred EEecCC-CccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc--CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 621 EIPAAR-HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL--RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 621 eIl~~~-~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~--~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
++..+. ..+.+.+.+. .+.....+.++|.++|.+. ..... ....++|+++...+++++++++++.|+++..+
T Consensus 366 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 366 RVPYDGPSMHEFVAQPP-EGFRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp BCSSCSSCCSCEEEBCS-TTCCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EecCCCCcceEEEEEcC-CCCCHHHHHHHHHHCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 774332 3332333442 1122578888888888642 11111 12568999888888999999999999887654
No 16
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.83 E-value=2.5e-18 Score=184.47 Aligned_cols=311 Identities=12% Similarity=0.036 Sum_probs=206.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..+.....+..++.+++++++|.+.+ ..++|+|||+|+..++.+......+ +| -
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~----------~i~~~~g~~~a~~~~~~~~~~~~~~------~g---------d 89 (382)
T 4hvk_A 35 HSYGFKAREAVQEAREKVAKLVNGGGG----------TVVFTSGATEANNLAIIGYAMRNAR------KG---------K 89 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCTTE----------EEEEESSHHHHHHHHHHHHHHHHGG------GC---------C
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCcC----------eEEEECCchHHHHHHHHHhhhhhcC------CC---------C
Confidence 333445677888899999999998653 5899999999998888765422111 22 3
Q ss_pred EEEecCCCchHHHHHHH-H--CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhh
Q psy11047 303 VAYCSDQAHSSVEKAGL-I--GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~-L--G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
.|+++..+|.+...++. + .+.+++.+++++++.+|+++|+++|+++ +.+|+.+..++.+|.+.|+++|.+
T Consensus 90 ~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~- 162 (382)
T 4hvk_A 90 HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISE- 162 (382)
T ss_dssp EEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHH-
T ss_pred EEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccC------ceEEEEECCCCCceeeCCHHHHHH-
Confidence 57888999999988763 3 3458999999999999999999998753 678888899999999999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKG 459 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G 459 (943)
+|++||+ +|+|++++.. .+
T Consensus 163 -------------------l~~~~~~--------li~D~a~~~~-~~--------------------------------- 181 (382)
T 4hvk_A 163 -------------------VLAGKAA--------LHIDATASVG-QI--------------------------------- 181 (382)
T ss_dssp -------------------HHSSSSE--------EEEECTTTBT-TB---------------------------------
T ss_pred -------------------HHHHcCE--------EEEEhHHhcC-CC---------------------------------
Confidence 9999874 9999998754 21
Q ss_pred cccccchhhhhcCCCCeeEEEEcCCCccCccCcchhh--hhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHH
Q psy11047 460 RLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALH--RTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVI 537 (943)
Q Consensus 460 ~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~--~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tL 537 (943)
..+ ... ..+|.+++++||+++...-+.+. ......+ ++..... ......+ ......++...
T Consensus 182 --~~~-~~~-----~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~-~~~~~~~-------~~~~~~~-~~~~~~~~~~~ 244 (382)
T 4hvk_A 182 --EVD-VEK-----IGADMLTISSNDIYGPKGVGALWIRKEAKLQP-VILGGGQ-------ENGLRSG-SENVPSIVGFG 244 (382)
T ss_dssp --CCC-HHH-----HTCSEEEEESGGGTSCTTCEEEEEETTCCCCC-SSCSSCT-------GGGTSCS-CCCHHHHHHHH
T ss_pred --CCC-chh-----cCCCEEEEeHHHhcCCCceEEEEEcCccCcCc-ccccCCC-------cCccccC-CcCHHHHHHHH
Confidence 011 111 13699999999987743221110 0000111 1110000 0000000 01112222222
Q ss_pred HHH--HHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHh
Q psy11047 538 RNF--GIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 615 (943)
Q Consensus 538 r~~--G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~ 615 (943)
..+ ..+++.+..++ ..++++++.+.|.
T Consensus 245 ~al~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~ 273 (382)
T 4hvk_A 245 KAAEITAMEWREEAER---------------------------------------------------LRRLRDRIIDNVL 273 (382)
T ss_dssp HHHHHHHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHhhHHHHHHH---------------------------------------------------HHHHHHHHHHHHh
Confidence 221 12333333333 3567888999999
Q ss_pred CCCCeEEecCCC---ccEEEEEecCCChHHHHHHHHHhccCcEEEeecc---cC-----------C------CcEEEEee
Q psy11047 616 GDPRFEIPAARH---LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS---LR-----------I------QGLGRAQN 672 (943)
Q Consensus 616 ~~p~~eIl~~~~---l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~---~~-----------g------~~~lR~v~ 672 (943)
+.|++++..++. .++++|++.+.+ ...+.+.|.++|.. +.+.. .. + ..++|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~ 350 (382)
T 4hvk_A 274 KIEESYLNGHPEKRLPNNVNVRFSYIE--GESIVLSLDMAGIQ-ASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTL 350 (382)
T ss_dssp TSTTEEECSCSSSBCTTEEEEEETTCC--HHHHHHHHHHTTCB-CBCC--------CCCHHHHHTTCCHHHHHTEEEEEC
T ss_pred cCCCeEEeCCccccCCCEEEEEECCCC--HHHHHHHHHHCCEE-EeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEc
Confidence 999999886543 478999997654 46788888888753 32210 00 0 47899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHH
Q psy11047 673 FTRTTNDDITRDWNEIRNTATEILA 697 (943)
Q Consensus 673 ~~~tt~edId~ll~~I~~~~~~ll~ 697 (943)
++.+|++|++++++.|+++.+++.+
T Consensus 351 ~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 351 GRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998776543
No 17
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.82 E-value=7.7e-18 Score=181.77 Aligned_cols=310 Identities=13% Similarity=0.051 Sum_probs=205.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..++........+.+++++++|.+.+ ..++|+|||+|+..++.+.+..... +| -
T Consensus 35 ~~~~~~~~~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~a~~~~~~~l~~~~~~------~g---------d 89 (382)
T 4eb5_A 35 HSYGFKAREAVQEAREKVAKLVNGGGG----------TVVFTSGATEANNLAIIGYAMRNAR------KG---------K 89 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCTTE----------EEEEESSHHHHHHHHHHHHHHHHGG------GC---------C
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCC----------eEEEcCchHHHHHHHHHHHHhhccC------CC---------C
Confidence 333445667888899999999998643 5899999999999998876532111 22 2
Q ss_pred EEEecCCCchHHHHHHH-H--CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhh
Q psy11047 303 VAYCSDQAHSSVEKAGL-I--GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~-L--G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
.|++++.+|.++..++. + .+.+++.+++++++.+|+++|+++|+.+ +.+|+.+..++.+|.+.|+++|.+
T Consensus 90 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~- 162 (382)
T 4eb5_A 90 HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISE- 162 (382)
T ss_dssp EEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHH-
T ss_pred EEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHHHHHH-
Confidence 47788999999988774 3 2348899999989999999999988653 678888899999999999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKG 459 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G 459 (943)
+|++||+ | ++|++|+.. ..
T Consensus 163 -------------------l~~~~~~-------~-i~D~a~~~g-~~--------------------------------- 181 (382)
T 4eb5_A 163 -------------------VLAGKAA-------L-HIDATASVG-QI--------------------------------- 181 (382)
T ss_dssp -------------------HHTTSSE-------E-EEECTTTBT-TB---------------------------------
T ss_pred -------------------HHHHCCC-------E-EEEcchhcC-Cc---------------------------------
Confidence 9999999 9 999999743 21
Q ss_pred cccccchhhhhcCCCCeeEEEEcCCCccCccCcchhh--hhcccCccccccCCCCcccccCcccc-CCCCCc-chHHHHH
Q psy11047 460 RLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALH--RTFNVEPLYLRHENSGLAIDYMHWQI-PLSKRF-RALKLWF 535 (943)
Q Consensus 460 ~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~--~af~~~p~YL~~~~~g~~~d~~~~ti-e~SRrf-rALklW~ 535 (943)
.. ..... .+|.++.++||+++...-+.+. ......+ ++.. +.. .... .++-.. ....++.
T Consensus 182 --~~-~~~~~-----~~di~~~s~sK~~g~~g~G~~~~~~~~~l~~-~~~~---~~~----~~~~~~~~~~~~~~~~~~~ 245 (382)
T 4eb5_A 182 --EV-DVEKI-----GADMLTISSNDIYGPKGVGALWIRKEAKLQP-VILG---GGQ----ENGLRSGSENVPSIVGFGK 245 (382)
T ss_dssp --CC-CHHHH-----TCSEEEEETGGGTCCSSCEEEEEETTCCCCC-SSCS---SCT----GGGTSCSCCCHHHHHHHHH
T ss_pred --cc-Ccccc-----CCCEEEeehHHhcCCCceEEEEEccccccCc-eecC---CCc----cccccCCCccHHHHHHHHH
Confidence 01 11111 3699999999997643212210 0000011 1110 000 0000 111111 1122222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHh
Q psy11047 536 VIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 615 (943)
Q Consensus 536 tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~ 615 (943)
++..+ .+++.+.+++ ..++++++.+.|+
T Consensus 246 al~~~-~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~ 273 (382)
T 4eb5_A 246 AAEIT-AMEWREEAER---------------------------------------------------LRRLRDRIIDNVL 273 (382)
T ss_dssp HHHHH-HHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHT
T ss_pred HHHHH-HHhHHHHHHH---------------------------------------------------HHHHHHHHHHHHh
Confidence 33322 1234333333 3467888889999
Q ss_pred CCCCeEEecCC---CccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc--------------------CCCcEEEEee
Q psy11047 616 GDPRFEIPAAR---HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL--------------------RIQGLGRAQN 672 (943)
Q Consensus 616 ~~p~~eIl~~~---~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~--------------------~g~~~lR~v~ 672 (943)
+.|++++..++ ..+++.|++++.+ ...+.++|.++|.. +.+... .+..++|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (382)
T 4eb5_A 274 KIEESYLNGHPEKRLPNNVNVRFSYIE--GESIVLSLDMAGIQ-ASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTL 350 (382)
T ss_dssp TSTTEEECSCSSSBCTTEEEEEETTSC--HHHHHHHHHHHTCB-CBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEEC
T ss_pred hCCCeEEeCCcccCCCCEEEEEeCCcC--HHHHHHHHHHCCEE-EeccccccCCCCcccHHHHHcCCChhccCCeEEEEC
Confidence 88999987654 2678999987543 46788888777753 332110 1246999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHH
Q psy11047 673 FTRTTNDDITRDWNEIRNTATEIL 696 (943)
Q Consensus 673 ~~~tt~edId~ll~~I~~~~~~ll 696 (943)
++.+++++++++++.|+++.+++.
T Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~~ 374 (382)
T 4eb5_A 351 GRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876543
No 18
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.82 E-value=1.2e-18 Score=190.40 Aligned_cols=343 Identities=10% Similarity=-0.040 Sum_probs=218.9
Q ss_pred CCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChH
Q psy11047 189 WQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTAS 268 (943)
Q Consensus 189 ~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGT 268 (943)
..+|.++-+.+++...+..+.+.+. ++... ..+|....+...+.+++++++|.+.. ...++|+|||
T Consensus 9 ~~~~~~~~~~pgp~~~~~~v~~a~~---~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~---------~~v~~~~sgt 74 (411)
T 3nnk_A 9 LNPPSRLLMGPGPINADPRVLRAMS---SQLIG--QYDPAMTHYMNEVMALYRGVFRTENR---------WTMLVDGTSR 74 (411)
T ss_dssp CCCCCCEEESSSCCCCCHHHHHHHT---SCCCC--TTCHHHHHHHHHHHHHHHHHHTCCCS---------EEEEEESCHH
T ss_pred cCCccceeecCCCCCCCHHHHHHhh---ccccc--cccHHHHHHHHHHHHHHHHHhCCCCC---------cEEEECCCcH
Confidence 4577777777777654433333322 22211 23677778888999999999999754 1368899999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH--HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHH
Q psy11047 269 ESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS--VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIE 346 (943)
Q Consensus 269 eANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS--v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~ 346 (943)
+|+..++.+.. .+| -.|+++..+|++ +..++...+.+++.++.+.++.+|+++|+++|+
T Consensus 75 ~al~~~~~~~~----------~~g---------d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 135 (411)
T 3nnk_A 75 AGIEAILVSAI----------RPG---------DKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVK 135 (411)
T ss_dssp HHHHHHHHHHC----------CTT---------CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhc----------CCC---------CEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHh
Confidence 99988877541 122 246778889988 666665444589999999999999999999998
Q ss_pred HhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcc
Q psy11047 347 RDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF 426 (943)
Q Consensus 347 ~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~af 426 (943)
+. .+.+|+.+..++.+|.+.|+++|++ +|++||+ |+|+|++++.. ..
T Consensus 136 ~~-----~~~~v~~~~~~nptG~~~~l~~i~~--------------------l~~~~~~-------~li~Dea~~~~-~~ 182 (411)
T 3nnk_A 136 RI-----RPRLLLTVQGDTSTTMLQPLAELGE--------------------ICRRYDA-------LFYTDATASLG-GN 182 (411)
T ss_dssp HH-----CCSEEEEESEETTTTEECCCTTHHH--------------------HHHHHTC-------EEEEECTTTBT-TB
T ss_pred hC-----CCeEEEEeCCCCCcceeccHHHHHH--------------------HHHHcCC-------EEEEECCcccC-Cc
Confidence 63 2668888889999999999999999 9999999 99999998654 21
Q ss_pred ccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC--------ccCcchhhhh
Q psy11047 427 EIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR--------VKNSGALHRT 498 (943)
Q Consensus 427 eLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~--------vr~~~~L~~a 498 (943)
+ .. .. . ..+|.+++++|||++ +-++..+ +.
T Consensus 183 --~---------------------------------~~-~~----~-~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~-~~ 220 (411)
T 3nnk_A 183 --P---------------------------------LE-TD----V-WGLDAVSAGMQKCLGGPSGTSPITLSARME-EA 220 (411)
T ss_dssp --C---------------------------------CC-TT----T-TTCSEEECCSTTTTCCCSSEEEEEECHHHH-HH
T ss_pred --c---------------------------------cc-hh----c-cCCcEEEecCccccCCCCceEEEEECHHHH-HH
Confidence 0 00 11 1 147999999999865 1111111 11
Q ss_pred cc----cCccccccCCCCcc-cccCcc--------------cc-CCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy11047 499 FN----VEPLYLRHENSGLA-IDYMHW--------------QI-PLSKR-FRALKLWFVIRNFGIKGLQKHIREIFSGLA 557 (943)
Q Consensus 499 f~----~~p~YL~~~~~g~~-~d~~~~--------------ti-e~SRr-frALklW~tLr~~G~~Gl~~~I~~~l~~~~ 557 (943)
+. ..+.|.+....|.. .....+ .. .++.. .....++.+++.+...|+.+.+++
T Consensus 221 ~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~------ 294 (411)
T 3nnk_A 221 IRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIAR------ 294 (411)
T ss_dssp HHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH------
T ss_pred HhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH------
Confidence 11 11222221111100 000000 00 11111 112233444554444445544444
Q ss_pred CccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC---CccEEEEE
Q psy11047 558 LPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR---HLGMVVIR 634 (943)
Q Consensus 558 ~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~---~l~iV~Fr 634 (943)
..++++++.+.|++. ++++..++ ..++++|+
T Consensus 295 ---------------------------------------------~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 328 (411)
T 3nnk_A 295 ---------------------------------------------HKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVV 328 (411)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEE
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEE
Confidence 245677777777765 77776544 36788998
Q ss_pred ec-CCChHHHHHHHHHhcc-CcEEEeec-ccCCCcEEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q psy11047 635 LL-GENILTEKLLKRLNSK-GRLHCVPA-SLRIQGLGRAQN-FTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 635 ~~-g~n~l~~~Ll~~L~~~-G~~~~s~t-~~~g~~~lR~v~-~~~tt~edId~ll~~I~~~~~~ 694 (943)
++ +.+ ..++.++|.++ |. .+.+. ......++|+++ ++.++++||+++++.|+++.++
T Consensus 329 ~~~~~~--~~~l~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 329 IPQGIN--GDQARKLMLEDFGI-EIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp CCTTCC--HHHHHHHHHHHHSE-EEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCC--HHHHHHHHHHhcCe-EEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 85 333 46788888776 75 44432 122356999975 7788999999999999987654
No 19
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.82 E-value=1e-18 Score=186.79 Aligned_cols=332 Identities=11% Similarity=-0.014 Sum_probs=213.5
Q ss_pred eeEEccCCCC-hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH
Q psy11047 194 MHAYFPALNS-YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL 272 (943)
Q Consensus 194 f~g~~~~~~s-~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL 272 (943)
++.+.+++.. ++.++..+.....++.......+|...++...+.+++++++|.++. ...++|+|||+|+.
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---------~~v~~~~g~t~al~ 75 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN---------YEVLFLASATEIWE 75 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT---------EEEEEESCHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEeCCchHHHH
Confidence 3455565544 3455544444444544223345788888889999999999999643 26899999999998
Q ss_pred HHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH--HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhc
Q psy11047 273 ICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV--EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKK 350 (943)
Q Consensus 273 ~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv--~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~ 350 (943)
.++.+.. .+ .+++....||+. ...+...+.+++.++.+.++.+|+++|+ +..
T Consensus 76 ~~~~~l~-------------------~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~--- 129 (362)
T 3ffr_A 76 RIIQNCV-------------------EK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPA--- 129 (362)
T ss_dssp HHHHHHC-------------------SS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCT---
T ss_pred HHHHhcc-------------------CC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccC---
Confidence 8876421 01 244455677772 2233344458899999888999999988 222
Q ss_pred cCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHc-CCCCCccchhhhHHhhhcCCCccccc
Q psy11047 351 KHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSY-FPKFQSVRLAQKFEALVLGDPRFEIP 429 (943)
Q Consensus 351 kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~-Gl~~~~l~lwLHVDAA~GG~~afeLp 429 (943)
.+.+|+.+..++.+|.+.|+++|++ +|++| |+ |+++|++++.. ..
T Consensus 130 ---~~~~v~~~~~~nptG~~~~l~~i~~--------------------la~~~p~~-------~li~D~a~~~~-~~--- 175 (362)
T 3ffr_A 130 ---DAEIICLTHNETSSGVSMPVEDINT--------------------FRDKNKDA-------LIFVDAVSSLP-YP--- 175 (362)
T ss_dssp ---TCCEEEEESEETTTTEECCHHHHTT--------------------SGGGSTTS-------EEEEECTTTTT-SS---
T ss_pred ---CccEEEEEcCCCCcceeCCHHHHHH--------------------HHHhCCCC-------EEEEecccccC-Cc---
Confidence 2678888889999999999999999 99999 99 99999998754 21
Q ss_pred cccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC-ccCcchh------hhhcccC
Q psy11047 430 AARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGAL------HRTFNVE 502 (943)
Q Consensus 430 ~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L------~~af~~~ 502 (943)
..+ +..+|.++.++|||++ ...-..+ .+.+.
T Consensus 176 --------------------------------~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~-- 213 (362)
T 3ffr_A 176 --------------------------------KFD--------WTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSK-- 213 (362)
T ss_dssp --------------------------------CCC--------TTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHH--
T ss_pred --------------------------------ccC--------hhHCcEEEEecccccCCCCceEEEEECHHHHHHhh--
Confidence 000 1227999999999998 2221111 00000
Q ss_pred ccccccCC-CCcccccCc-------cccCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchh
Q psy11047 503 PLYLRHEN-SGLAIDYMH-------WQIPLSKR-FRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTA 573 (943)
Q Consensus 503 p~YL~~~~-~g~~~d~~~-------~tie~SRr-frALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~ 573 (943)
.+..+++ .+...++.. ....++-. +....++.+++.+...|+.+.+++
T Consensus 214 -~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~---------------------- 270 (362)
T 3ffr_A 214 -ALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQ---------------------- 270 (362)
T ss_dssp -HHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH----------------------
T ss_pred -hccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHH----------------------
Confidence 0000000 000000000 00011111 122234444554444454444444
Q ss_pred hhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecC----CCccEEEEEecCCChHHHHHHHHH
Q psy11047 574 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAA----RHLGMVVIRLLGENILTEKLLKRL 649 (943)
Q Consensus 574 ~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~----~~l~iV~Fr~~g~n~l~~~Ll~~L 649 (943)
..++++++.+.|++.|++++..+ ....+++|++.+ ...++.++|
T Consensus 271 -----------------------------~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 318 (362)
T 3ffr_A 271 -----------------------------TEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM---LPGEINKIL 318 (362)
T ss_dssp -----------------------------HHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS---CHHHHHHHH
T ss_pred -----------------------------HHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC---CHHHHHHHH
Confidence 35678888999999999999762 246788898876 357899999
Q ss_pred hccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 650 NSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 650 ~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
.++|..........+.+++|++++..++++||+++++.|+++
T Consensus 319 ~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 319 EPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp GGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 988754432222234679999998999999999999999875
No 20
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.82 E-value=1.5e-18 Score=189.71 Aligned_cols=344 Identities=10% Similarity=0.009 Sum_probs=213.6
Q ss_pred CCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcE-EEcC
Q psy11047 187 THWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGG-VLQT 265 (943)
Q Consensus 187 ~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~G-vfTs 265 (943)
....+|.++-+.+++...+..+.+.+. +.. ....++....+...+.+++++++|.+.. .. ++|+
T Consensus 5 ~~~~~~~~~~~~p~p~~~~~~v~~a~~---~~~--~~~~~~~~~~~~~~l~~~la~~~g~~~~----------~~~~~~~ 69 (416)
T 3isl_A 5 RELCTPLRTIMTPGPVEVDPRVLRVMS---TPV--VGQFDPAFTGIMNETMEMLRELFQTKNR----------WAYPIDG 69 (416)
T ss_dssp CCCCCCCCEECSSSSCCCCHHHHHHTT---SCC--CCTTSHHHHHHHHHHHHHHHHHTTCCCS----------EEEEEES
T ss_pred cccCcccceeecCCCcCcCHHHHHHhc---ccC--CCCccHHHHHHHHHHHHHHHHHhCCCCC----------cEEEecC
Confidence 334566776666666544333332222 221 2234466678888999999999998754 34 4899
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH--HHHHHHHCCccEEEEecCCCCCcCHHHHHH
Q psy11047 266 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS--VEKAGLIGLVNMRYIESDDKLSLRGDKLIE 343 (943)
Q Consensus 266 GGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS--v~KAa~LG~~~v~~Vp~D~~grmD~daLe~ 343 (943)
|||+|+..++.+. + .+| -.|++++.+|++ +.+++...+.+++.++.+.++.+|+++|++
T Consensus 70 s~t~al~~~~~~l----~------~~g---------d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 130 (416)
T 3isl_A 70 TSRAGIEAVLASV----I------EPE---------DDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIR 130 (416)
T ss_dssp CHHHHHHHHHHHH----C------CTT---------CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHH
T ss_pred cHHHHHHHHHHHh----c------CCC---------CEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHH
Confidence 9999998876643 1 122 246677789998 666665544589999999999999999999
Q ss_pred HHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 344 AIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 344 aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++.. +.+|+.+..++.+|.+.|+++|.+ +|++||+ |+++|++++..
T Consensus 131 ~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~--------------------l~~~~~~-------~li~D~a~~~~ 178 (416)
T 3isl_A 131 EIKKVK-----PKIVAMVHGETSTGRIHPLKAIGE--------------------ACRTEDA-------LFIVDAVATIG 178 (416)
T ss_dssp HHHHHC-----CSEEEEESEETTTTEECCCHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred HHhhCC-----CcEEEEEccCCCCceecCHHHHHH--------------------HHHHcCC-------EEEEECCcccc
Confidence 998531 568888899999999999999999 9999999 99999998754
Q ss_pred CccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC-c-------cCcchh
Q psy11047 424 PRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR-V-------KNSGAL 495 (943)
Q Consensus 424 ~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-v-------r~~~~L 495 (943)
.+ + .+ .. . ..+|.+++++|||++ . -++..+
T Consensus 179 -~~--~---------------------------------~~-~~----~-~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~ 216 (416)
T 3isl_A 179 -GC--E---------------------------------VK-VD----E-WKIDAAIGGTQKCLSVPSGMAPITYNERVA 216 (416)
T ss_dssp -TS--C---------------------------------CC-TT----T-TTCSEEECCSSSTTCCCSSEEEEEECHHHH
T ss_pred -CC--C---------------------------------cc-hh----h-cCCCEEEecCccccCCCCCeEEEEECHHHH
Confidence 21 0 00 10 1 147999999999865 1 111111
Q ss_pred hhhcccC------------ccccccCCC--Cccccc-------Ccccc-CCCCC-cchHHHHHHHHHHHHHHHHHHHHHH
Q psy11047 496 HRTFNVE------------PLYLRHENS--GLAIDY-------MHWQI-PLSKR-FRALKLWFVIRNFGIKGLQKHIREI 552 (943)
Q Consensus 496 ~~af~~~------------p~YL~~~~~--g~~~d~-------~~~ti-e~SRr-frALklW~tLr~~G~~Gl~~~I~~~ 552 (943)
+.+... .++...+.. ....+. ....+ .++.. .....++.++..+...|+.+..++
T Consensus 217 -~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~- 294 (416)
T 3isl_A 217 -DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFER- 294 (416)
T ss_dssp -HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH-
T ss_pred -HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH-
Confidence 111100 001100000 000000 00011 11111 122334445555544445555444
Q ss_pred HhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC---cc
Q psy11047 553 FSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH---LG 629 (943)
Q Consensus 553 l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~---l~ 629 (943)
..++++++.+.|.+. ++++..++. .+
T Consensus 295 --------------------------------------------------~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 323 (416)
T 3isl_A 295 --------------------------------------------------HRHHEAALAAGIKAM-GLRLFGDDSCKMPV 323 (416)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHHT-TCCBCSCGGGBCTT
T ss_pred --------------------------------------------------HHHHHHHHHHHHHHc-CCEeccCccccCCc
Confidence 245677888888774 888876543 57
Q ss_pred EEEEEec-CCChHHHHHHHHHhcc-CcEEEeecc-cCCCcEEEEeecCCCCH-HHHHHHHHHHHHHHHH
Q psy11047 630 MVVIRLL-GENILTEKLLKRLNSK-GRLHCVPAS-LRIQGLGRAQNFTRTTN-DDITRDWNEIRNTATE 694 (943)
Q Consensus 630 iV~Fr~~-g~n~l~~~Ll~~L~~~-G~~~~s~t~-~~g~~~lR~v~~~~tt~-edId~ll~~I~~~~~~ 694 (943)
+++|++. +.+ ..++.++|.++ |. .+.+.. .....++|++++..++. ++|+++++.|+++..+
T Consensus 324 ~~~~~~~~~~~--~~~l~~~L~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 324 VTCVEIPGGID--GESVRDMLLAQFGI-EIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp EEEEECCTTCC--HHHHHHHHHHHHCE-ECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCC--HHHHHHHHHHhCCE-EEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 8899985 333 56788888776 74 444322 12457999977555444 4499999999887654
No 21
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.81 E-value=5.5e-19 Score=201.63 Aligned_cols=318 Identities=11% Similarity=0.031 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..-|..+++||+++ |+|.. +...++.|+|.+++..++++-... .|+ + ..|+++..
T Consensus 116 ~ltn~l~ld~L~~~-G~~~~---------~~~flVnGsTgg~lamilaa~r~~-------rpg-------~-d~VIvpRn 170 (501)
T 3hl2_A 116 KITNSLVLDIIKLA-GVHTV---------ANCFVVPMATGMSLTLCFLTLRHK-------RPK-------A-KYIIWPRI 170 (501)
T ss_dssp HHHHHHHHHHHHHT-TCTTC---------CEEEEESSCHHHHHHHHHHHHHHH-------CTT-------C-CEEEEECC
T ss_pred HHHHHHHHHHHHHc-CCCCC---------CcEEEECcHHHHHHHHHHHHcCcc-------cCC-------C-CEEEEecc
Confidence 34567899999999 99975 468999999977666655543211 111 1 23566999
Q ss_pred CchHHHHHHHHCCccEEEEec---CCCCCcCHHHHHHHHHHhhccCCCcEEEEEe-cCCCcccccccHHHhhhhcccccc
Q psy11047 310 AHSSVEKAGLIGLVNMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFIFSG-LALPAFLVVDSYCCLGTAMIVKGL 385 (943)
Q Consensus 310 aHySv~KAa~LG~~~v~~Vp~---D~~grmD~daLe~aI~~d~~kG~~P~~VVaT-aGTT~tGaIDpL~eIa~~~~~~d~ 385 (943)
+|.|+.||+.+.+...++|++ ++...||+++++++|++...+ ..+++++ ..+...+.+|||++|++
T Consensus 171 ~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~---~i~~V~~Ttt~y~p~~~ddI~eIae------- 240 (501)
T 3hl2_A 171 DQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPD---CILCIHSTTSCFAPRVPDRLEELAV------- 240 (501)
T ss_dssp CCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGG---GEEEEEEECSCCTTBCCCCHHHHHH-------
T ss_pred hHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCC---cEEEEEecCCCCCCcccccHHHHHH-------
Confidence 999999999764446666654 457899999999999986322 3344443 33333457799999999
Q ss_pred ccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccc
Q psy11047 386 GFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVP 465 (943)
Q Consensus 386 ~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~ 465 (943)
+|++||+ |+|||.|||+...+ ... .+.
T Consensus 241 -------------Ich~~gI-------pllVDeAhGah~~~---------------------~~~------------lp~ 267 (501)
T 3hl2_A 241 -------------ICANYDI-------PHIVNNAYGVQSSK---------------------CMH------------LIQ 267 (501)
T ss_dssp -------------HHHHHTC-------CEEEECTTCTTCHH---------------------HHH------------HHH
T ss_pred -------------HHHHcCC-------eEEEeCcchhhhhh---------------------hhh------------hHH
Confidence 9999999 99999999987222 000 111
Q ss_pred hhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCC-CcchHHHHHHHHHHHHHH
Q psy11047 466 ASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSK-RFRALKLWFVIRNFGIKG 544 (943)
Q Consensus 466 ~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SR-rfrALklW~tLr~~G~~G 544 (943)
..++ +.+||.++.|+||++.++-+..+. +..+..++..- ....+|.+ .+.++++|++++.+|.+|
T Consensus 268 --sA~~-~GrAD~vVqS~HK~llvpIGG~ii--~~~d~e~l~~~---------~~~yPGr~S~Spsldl~~tLL~lGr~G 333 (501)
T 3hl2_A 268 --QGAR-VGRIDAFVQSLDKNFMVPVGGAII--AGFNDSFIQEI---------SKMYPGRASASPSLDVLITLLSLGSNG 333 (501)
T ss_dssp --HHHH-HSCCCEEEEEHHHHHCCCSSCEEE--EESCHHHHHHH---------HHTSCSCBCSHHHHHHHHHHHHHHHHH
T ss_pred --HHHh-cCCCcEEEecccccceeecCceEE--EeCCHHHHHHH---------HHhCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 1111 125999999999999954332221 00111122110 00112333 467889999999999999
Q ss_pred HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCC---CCeE
Q psy11047 545 LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD---PRFE 621 (943)
Q Consensus 545 l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~---p~~e 621 (943)
|++++++.+ +++++|.+.|+++ -+-+
T Consensus 334 y~~ll~e~~---------------------------------------------------ela~~L~~~L~~la~~~ge~ 362 (501)
T 3hl2_A 334 YKKLLKERK---------------------------------------------------EMFSYLSNQIKKLSEAYNER 362 (501)
T ss_dssp HHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHHHhcChh
Confidence 999999943 4555555555543 2345
Q ss_pred EecCCCcc-EEEEEecCCC----hHHHHHHHHHhc---cCcEEEeecc--------------c-CC--CcEEEEeecCCC
Q psy11047 622 IPAARHLG-MVVIRLLGEN----ILTEKLLKRLNS---KGRLHCVPAS--------------L-RI--QGLGRAQNFTRT 676 (943)
Q Consensus 622 Il~~~~l~-iV~Fr~~g~n----~l~~~Ll~~L~~---~G~~~~s~t~--------------~-~g--~~~lR~v~~~~t 676 (943)
++..+.-. -+++.+.... .....|-..|-. .|--.+.+.. + .. ..++=+.+..-+
T Consensus 363 ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~ 442 (501)
T 3hl2_A 363 LLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGM 442 (501)
T ss_dssp BCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTC
T ss_pred hcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCC
Confidence 66544222 2344554321 112233333333 2332332210 1 11 236777788899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHh
Q psy11047 677 TNDDITRDWNEIRNTATEILAELA 700 (943)
Q Consensus 677 t~edId~ll~~I~~~~~~ll~~~~ 700 (943)
+.+||+.+++.++++..++.++..
T Consensus 443 ~~~~v~~~~~~l~~~~~~~~~~~~ 466 (501)
T 3hl2_A 443 KMQDVDLFIKRLDRCLKAVRKERS 466 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999887766544
No 22
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.81 E-value=1.1e-17 Score=187.62 Aligned_cols=360 Identities=13% Similarity=0.036 Sum_probs=227.8
Q ss_pred ChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCceeEEccCCC---ChHHHHHHHH--HHHHhcc-CccccC
Q psy11047 152 KPGYLRSLVPESAPVEPEKWDTIMGDIEKVIMPGITHWQSPYMHAYFPALN---SYPSLLGDML--SDAINCL-GFTWAS 225 (943)
Q Consensus 152 ~p~~l~~~l~~~lPe~G~~~e~iL~~l~~~I~~~~~~~~sPrf~g~~~~~~---s~~silgd~L--~~alN~n-~~~~~~ 225 (943)
-|..++.. +..+| +|.+..++++++.....++.. +|..|...+. ..|..+.+++ ...+... ....+.
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~ 102 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEV 102 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGG
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchh
Confidence 36677766 77899 889999999998876543321 1222222221 1234444444 3333322 112246
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
++...+++.++.+++++++|.+.. .+++|+|||.++..++++.+ .. +| ..|+
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~----------~i~~~~g~taa~ea~~~a~~---~~------~g---------d~Vi 154 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA----------NASMYDGATALAEGVLLALR---ET------GR---------MGVL 154 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE----------CSCBSSHHHHHHHHHHHHHH---HH------TC---------CEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc----------ceEEeCcHHHHHHHHHHHHh---cC------CC---------CEEE
Confidence 788889999999999999999753 46899999944322222222 11 12 2477
Q ss_pred ecCCCchHHHHHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 306 CSDQAHSSVEKAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 306 ~S~~aHySv~KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
+++.+|.|...++. ..+.+++.|++ +++.+|+++ |+. .+.+|+.+.. +.+|.++|+++|++
T Consensus 155 v~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~--- 219 (438)
T 1wyu_A 155 VSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAE--- 219 (438)
T ss_dssp EETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHH---
T ss_pred EcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHH---
Confidence 89999999886652 23458888887 568888776 332 2778888886 99999999999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhh---hcCCCccccccccccceeeeeecchhhhHHHHHHHhhcc
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEAL---VLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSK 458 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA---~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~ 458 (943)
+|+++|+ |+|+|+. +|..
T Consensus 220 -----------------la~~~g~-------~vivd~d~~a~g~~----------------------------------- 240 (438)
T 1wyu_A 220 -----------------AAHGAGA-------LFVAVADPLSLGVL----------------------------------- 240 (438)
T ss_dssp -----------------HHHHTTC-------EEEEECCTTGGGTB-----------------------------------
T ss_pred -----------------HHHHcCC-------EEEEEechhhccCc-----------------------------------
Confidence 9999999 9995533 4322
Q ss_pred CcccccchhhhhcCCCCeeEEEEcCCC-----ccCccCcc------hhhhhcccCccccccCC---CCcccccCcccc--
Q psy11047 459 GRLHCVPASLRIQGLGRAQNFTIVPSS-----LLRVKNSG------ALHRTFNVEPLYLRHEN---SGLAIDYMHWQI-- 522 (943)
Q Consensus 459 G~~~~p~~r~~l~Gie~ADSItiDpHK-----~L~vr~~~------~L~~af~~~p~YL~~~~---~g~~~d~~~~ti-- 522 (943)
..+ .. ..+|.++++.|| |++-...+ .+.+. -+.++.... .+. ..|.+
T Consensus 241 ---~~~--~~-----~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~---l~~~~~g~~~~~~~~----~~~~~~l 303 (438)
T 1wyu_A 241 ---KPP--GA-----YGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQ---LPGRLVSETVDVEGR----RGFILTL 303 (438)
T ss_dssp ---CCH--HH-----HTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGG---CCSCCEEEEEBTTSC----EEEEECC
T ss_pred ---CCC--cc-----CCCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHh---CCCceeccccccCCC----cceeeec
Confidence 011 11 147999999888 33311111 11111 112221100 000 00100
Q ss_pred ----------CCCCCc------chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccc
Q psy11047 523 ----------PLSKRF------RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKL 586 (943)
Q Consensus 523 ----------e~SRrf------rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~ 586 (943)
.++... .++..|+.+..+|.+|+.+..++
T Consensus 304 ~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~----------------------------------- 348 (438)
T 1wyu_A 304 QAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALK----------------------------------- 348 (438)
T ss_dssp GGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
T ss_pred cccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHH-----------------------------------
Confidence 011111 12333444788888888877776
Q ss_pred cCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecC-CCccEEEEEecCCChHHHHHHHHHhccCcEE-EeecccCC
Q psy11047 587 QTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLH-CVPASLRI 664 (943)
Q Consensus 587 ~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~-~s~t~~~g 664 (943)
..++++++.+.|++.|++++..+ +.+++++|+.. . ....+.++|.++|... +.+....+
T Consensus 349 ----------------~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~--~~~~~~~~L~~~gi~v~~~~~~~~~ 409 (438)
T 1wyu_A 349 ----------------SVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP-K--DPEAVRRALAERGFHGATPVPREYG 409 (438)
T ss_dssp ----------------HHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS-S--CHHHHHHHHHHTTCCCCEECCTTSC
T ss_pred ----------------HHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC-C--CHHHHHHHHHHCCceeccccccccC
Confidence 35678899999999999999876 45677788763 2 2578888888888643 13333334
Q ss_pred CcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 665 QGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 665 ~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
..++|+++++.+|++||+++++.|+++
T Consensus 410 ~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 410 ENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 679999888999999999999998765
No 23
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.81 E-value=1.3e-17 Score=183.37 Aligned_cols=311 Identities=12% Similarity=0.060 Sum_probs=202.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
+.....+...+.+++++++|.+.+ ..+||+|||+|+..++.+.++... .+ ...|+
T Consensus 63 ~~~~~~~~~~l~~~la~~~~~~~~----------~v~~~~ggt~a~~~a~~~l~~~~~------~~---------gd~Vl 117 (423)
T 3lvm_A 63 GWQAEEAVDIARNQIADLVGADPR----------EIVFTSGATESDNLAIKGAANFYQ------KK---------GKHII 117 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGG----------GEEEESSHHHHHHHHHHHHHHHHT------TT---------CCEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCC----------eEEEeCChHHHHHHHHHHHHHhhc------cC---------CCEEE
Confidence 344567777899999999999754 689999999999999887654321 11 23578
Q ss_pred ecCCCchHHHHHHH-H--CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 306 CSDQAHSSVEKAGL-I--GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 306 ~S~~aHySv~KAa~-L--G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
++..+|.+...++. + .+.+++.++.+.++.+|+++|+++|+++ +.+|+.+...+.+|.+.|+++|.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~---- 187 (423)
T 3lvm_A 118 TSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDIAAIGE---- 187 (423)
T ss_dssp EETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHH----
T ss_pred ECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC------cEEEEEeCCCCCCccccCHHHHHH----
Confidence 88999999988772 3 3458899999999999999999998754 678888888899999999999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+|++||+ |+++|+++++. .+ +
T Consensus 188 ----------------l~~~~~~-------~li~Dea~~~~-~~--~--------------------------------- 208 (423)
T 3lvm_A 188 ----------------MCRARGI-------IYHVDATQSVG-KL--P--------------------------------- 208 (423)
T ss_dssp ----------------HHHHHTC-------EEEEECTTTTT-TS--C---------------------------------
T ss_pred ----------------HHHHcCC-------EEEEEhhhhcC-CC--C---------------------------------
Confidence 9999999 99999999765 22 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHHHHHHHH
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWFVIRNFG 541 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~tLr~~G 541 (943)
.. +... .+|.+++++||+++...-+.+.-. ......+.....+..... .+. .++-.. ....+..+++.+.
T Consensus 209 ~~-----~~~~-~~di~~~s~sK~~g~~g~G~~~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~a~~~al~~~~ 279 (423)
T 3lvm_A 209 ID-----LSQL-KVDLMSFSGHKIYGPKGIGALYVR-RKPRVRIEAQMHGGGHER-GMR-SGTLPVHQIVGMGEAYRIAK 279 (423)
T ss_dssp CC-----TTTS-CCSEEEEESTTTTSCSSCEEEEEC-BTTBCCCCCSSCSSCTTT-TTC-CSCCCHHHHHHHHHHHHHHH
T ss_pred cC-----hhhc-CCCEEEechHHhcCCCCeEEEEEe-ccccCCCCccccCCcccc-ccc-CCCCCHHHHHHHHHHHHHHH
Confidence 00 0111 479999999997763221111000 000000100000000000 000 111111 1111112222221
Q ss_pred HHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeE
Q psy11047 542 IKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFE 621 (943)
Q Consensus 542 ~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~e 621 (943)
..+.+.+++ ..++++++.+.|++.|+++
T Consensus 280 -~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~~~~~~ 307 (423)
T 3lvm_A 280 -EEMATEMER---------------------------------------------------LRGLRNRLWNGIKDIEEVY 307 (423)
T ss_dssp -HHHHHHHHH---------------------------------------------------HHHHHHHHHHHHTTSTTEE
T ss_pred -HHHHHHHHH---------------------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 112222222 3567888999999999999
Q ss_pred EecCCC---ccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc-----------------C---CCcEEEEeecCCCCH
Q psy11047 622 IPAARH---LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL-----------------R---IQGLGRAQNFTRTTN 678 (943)
Q Consensus 622 Il~~~~---l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~-----------------~---g~~~lR~v~~~~tt~ 678 (943)
+..++. .++++|++.+.+ ...+.+.|.+ +.+.+... . ...++|++++..+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~ 382 (423)
T 3lvm_A 308 LNGDLEHGAPNILNVSFNYVE--GESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTE 382 (423)
T ss_dssp EESCSTTBCTTEEEEEETTSC--HHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCH
T ss_pred EeCCccccCCCeEEEEeCCCC--HHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCH
Confidence 987653 578999986544 4566666655 33332110 0 147899998899999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy11047 679 DDITRDWNEIRNTATEIL 696 (943)
Q Consensus 679 edId~ll~~I~~~~~~ll 696 (943)
+||+++++.|+++..++.
T Consensus 383 e~i~~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 383 EEIDYTIELVRKSIGRLR 400 (423)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999877654
No 24
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.79 E-value=2.5e-17 Score=179.99 Aligned_cols=309 Identities=11% Similarity=0.074 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHhCC-CccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEec
Q psy11047 229 CTELEIITMNWLGKMIGL-PEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS 307 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~-p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S 307 (943)
.......+.+++++++|. +.+ ..++|+|||+|+..++.+.+...+ .+| -.|+++
T Consensus 70 ~~~~~~~l~~~la~~~~~~~~~----------~v~~~~g~t~a~~~~~~~~~~~~~------~~g---------d~Vl~~ 124 (420)
T 1t3i_A 70 ATDAYEAVRNKVAKFINARSPR----------EIVYTRNATEAINLVAYSWGMNNL------KAG---------DEIITT 124 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGG----------GEEEESSHHHHHHHHHHHTHHHHC------CTT---------CEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCC----------eEEEcCChHHHHHHHHHHhhhccc------CCC---------CEEEEC
Confidence 345566788999999998 332 689999999999999887642111 122 247778
Q ss_pred CCCchH----HHHHHH-HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 308 DQAHSS----VEKAGL-IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 308 ~~aHyS----v~KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
+.+|++ +..++. .|. +++.++.++++.+|+++|+++|+.+ +.+|+.+..++.+|.+.|+++|.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~---- 193 (420)
T 1t3i_A 125 VMEHHSNLVPWQMVAAKTGA-VLKFVQLDEQESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQ---- 193 (420)
T ss_dssp TTCCGGGTHHHHHHHHHHCC-EEEEECBCTTSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHH----
T ss_pred cchhHHHHHHHHHHHHhcCc-EEEEeccCCCCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHH----
Confidence 889988 445553 454 7889999889999999999998653 678888999999999999999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+|++||+ |+++|++++.+ .. .
T Consensus 194 ----------------l~~~~~~-------~li~D~a~~~~-~~-----------------------------------~ 214 (420)
T 1t3i_A 194 ----------------LAHQAGA-------KVLVDACQSAP-HY-----------------------------------P 214 (420)
T ss_dssp ----------------HHHHTTC-------EEEEECTTTTT-TS-----------------------------------C
T ss_pred ----------------HHHHcCC-------EEEEEhhhccC-Cc-----------------------------------c
Confidence 9999999 99999999755 21 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccCccCcch------hhhhcccCccccccCCCCcc--ccc-----CccccC-CCCCc
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLRVKNSGA------LHRTFNVEPLYLRHENSGLA--IDY-----MHWQIP-LSKRF 528 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~------L~~af~~~p~YL~~~~~g~~--~d~-----~~~tie-~SRrf 528 (943)
. ..... .+|.+++++||.++....+. +...+. + +..+...... .+. ..+.+. ++...
T Consensus 215 ~-~~~~~-----~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (420)
T 1t3i_A 215 L-DVQLI-----DCDWLVASGHKMCAPTGIGFLYGKEEILEAMP--P-FFGGGEMIAEVFFDHFTTGELPHKFEAGTPAI 285 (420)
T ss_dssp C-CHHHH-----TCSEEEEEGGGTTSCTTCEEEEECHHHHHHSC--C-CSCSTTSEEEECSSCEEECCTTGGGCCSSCCH
T ss_pred C-chhhc-----CCCEEEEehhhhcCCCceEEEEEchHHHhhcC--c-eecCCCccccccccccCCCCchhhccCCCccH
Confidence 0 11111 36999999999766322111 111111 0 1100000000 000 001111 11111
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 -RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 -rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
.++.++.+++.+...++.+..++ ..+++
T Consensus 286 ~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~ 314 (420)
T 1t3i_A 286 AEAIALGAAVDYLTDLGMENIHNY---------------------------------------------------EVELT 314 (420)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH---------------------------------------------------HHHHH
Confidence 12223334444443344444443 24577
Q ss_pred HHHHHHHhCCCCeEEecCC-----CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc--------cCC-CcEEEEeec
Q psy11047 608 QKFEALVLGDPRFEIPAAR-----HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS--------LRI-QGLGRAQNF 673 (943)
Q Consensus 608 ~~l~~~L~~~p~~eIl~~~-----~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~--------~~g-~~~lR~v~~ 673 (943)
+++.+.|++.|++++..+. ..++++|.+++.+ ...+.+.|.++|. ++.+.. .-+ ..++|++++
T Consensus 315 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~g~~~~iRis~~ 391 (420)
T 1t3i_A 315 HYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH--ASDVATMVDQDGI-AIRSGHHCTQPLHRLFDASGSARASLY 391 (420)
T ss_dssp HHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC--HHHHHHHHHTTTE-ECBCSCTTCHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC--HHHHHHHHHHCCe-EEeeccccchHHHHhcCCCCeEEEecC
Confidence 8888899998999998764 4889999986533 4677888888875 444321 112 578999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy11047 674 TRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 674 ~~tt~edId~ll~~I~~~~~~l 695 (943)
..++++|++++++.|+++.+.+
T Consensus 392 ~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 392 FYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999886543
No 25
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.79 E-value=3.4e-17 Score=176.94 Aligned_cols=312 Identities=9% Similarity=0.007 Sum_probs=204.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
++....+...+.+++++++|.++. ...++|+|||+|+..++.+.. .+| -.|+
T Consensus 48 ~~~~~~~~~~~~~~la~~~g~~~~---------~~v~~~~g~t~a~~~~~~~l~----------~~g---------d~vl 99 (386)
T 2dr1_A 48 SKEYRKVHMDTVERLREFLEVEKG---------EVLLVPSSGTGIMEASIRNGV----------SKG---------GKVL 99 (386)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSS---------EEEEESSCHHHHHHHHHHHHS----------CTT---------CEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEeCChHHHHHHHHHHhh----------cCC---------CeEE
Confidence 455678889999999999999721 257899999999988877531 122 2467
Q ss_pred ecCCCchH--HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 306 CSDQAHSS--VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 306 ~S~~aHyS--v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++.+|++ +..++...+.+++.++.+.++.+|+++|+++|++.. .+.+|+.+...+.+|.+.|+++|.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~----- 170 (386)
T 2dr1_A 100 VTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNP----DVEAVTITYNETSTGVLNPLPELAK----- 170 (386)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHH-----
T ss_pred EEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCC----CCcEEEEEeecCCcchhCCHHHHHH-----
Confidence 77889988 666665444588999998889999999999996521 2667888888899999999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ |+++|++|+.+ .+ ..
T Consensus 171 ---------------l~~~~~~-------~li~D~a~~~~-~~-----------------------------------~~ 192 (386)
T 2dr1_A 171 ---------------VAKEHDK-------LVFVDAVSAMG-GA-----------------------------------DI 192 (386)
T ss_dssp ---------------HHHHTTC-------EEEEECTTTBT-TB-----------------------------------CC
T ss_pred ---------------HHHHcCC-------eEEEEcccccc-Cc-----------------------------------cc
Confidence 9999999 99999999865 22 00
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccCccCc-chhhhhcccCcccccc----CCCCcccccC--------ccccCCCCC-cc
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLRVKNS-GALHRTFNVEPLYLRH----ENSGLAIDYM--------HWQIPLSKR-FR 529 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~L~~af~~~p~YL~~----~~~g~~~d~~--------~~tie~SRr-fr 529 (943)
+ +... .+|.++.++||+++...+ +.+. .....+.. ...+...++. .....++.. ..
T Consensus 193 ~-----~~~~-~~di~~~s~sK~~~~~~g~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (386)
T 2dr1_A 193 K-----FDKW-GLDVVFSSSQKAFGVPPGLAIGA----FSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQ 262 (386)
T ss_dssp C-----TTTT-TCSEEEEETTSTTCCCSSCEEEE----ECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHH
T ss_pred c-----cccc-CCcEEEEeccccccCCCceEEEE----ECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHH
Confidence 1 1111 469999999999884321 1110 00000000 0000000000 000111111 11
Q ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHH
Q psy11047 530 ALKLWFVIRNFGIK-GLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQ 608 (943)
Q Consensus 530 ALklW~tLr~~G~~-Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~ 608 (943)
...++.+++.+... |+.+..++ ..++++
T Consensus 263 ~~a~~~~l~~~~~~g~~~~~~~~---------------------------------------------------~~~~~~ 291 (386)
T 2dr1_A 263 VFGINVALRIIEKMGGKEKWLEM---------------------------------------------------YEKRAK 291 (386)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH---------------------------------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHH---------------------------------------------------HHHHHH
Confidence 22233344443322 33333333 245677
Q ss_pred HHHHHHhCCCCeEEecCC---CccEEEEEec-CCChHHHHHHHHHhccCcEEEeecc-cCCCcEEEEeecCCCCHHHHHH
Q psy11047 609 KFEALVLGDPRFEIPAAR---HLGMVVIRLL-GENILTEKLLKRLNSKGRLHCVPAS-LRIQGLGRAQNFTRTTNDDITR 683 (943)
Q Consensus 609 ~l~~~L~~~p~~eIl~~~---~l~iV~Fr~~-g~n~l~~~Ll~~L~~~G~~~~s~t~-~~g~~~lR~v~~~~tt~edId~ 683 (943)
++.+.|++. ++++..+. ..++++|+++ +.+ ..++.++|.++|. ++.+.. ..+..++|++++..++++|+++
T Consensus 292 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~~~~~~~~~i~~ 367 (386)
T 2dr1_A 292 MVREGVREI-GLDILAEPGHESPTITAVLTPPGIK--GDEVYEAMRKRGF-ELAKGYGSVKEKTFRIGHMGYMKFEDIQE 367 (386)
T ss_dssp HHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTTCC--HHHHHHHHHHTTE-ECEECCGGGTTTEEEEECCSSCCHHHHHH
T ss_pred HHHHHHHHc-CCeeCcCccccCCceEEEEcCCCCC--HHHHHHHHHHCCe-EEecCccccCCCEEEEECCCCCCHHHHHH
Confidence 777778776 77776543 4678889886 222 5678888888874 454432 1245699998888999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy11047 684 DWNEIRNTATEILA 697 (943)
Q Consensus 684 ll~~I~~~~~~ll~ 697 (943)
+++.|+++.+++..
T Consensus 368 ~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 368 MLDNLREVINELKK 381 (386)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC
Confidence 99999988766543
No 26
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.78 E-value=9.3e-18 Score=180.88 Aligned_cols=311 Identities=13% Similarity=0.052 Sum_probs=202.6
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.++....+...+.+++++++|.+... ...++|+|||+|+. ++.+. + .+| -.|
T Consensus 29 ~~~~~~~~~~~~~~~la~~~~~~~~~--------~~v~~~~g~t~al~-~~~~~----~------~~g---------d~v 80 (384)
T 3zrp_A 29 TSKEFVEALAYSLKGLRYVMGASKNY--------QPLIIPGGGTSAME-SVTSL----L------KPN---------DKI 80 (384)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCTTS--------EEEEEESCHHHHHH-HGGGG----C------CTT---------CEE
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCC--------cEEEEcCCcHHHHH-HHHhh----c------CCC---------CEE
Confidence 35666788888999999999997520 25899999999998 76432 1 122 246
Q ss_pred EecCCCchH--HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 305 YCSDQAHSS--VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 305 ~~S~~aHyS--v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
++++.+|++ +...+...+.+++.++.+.++.+|+++|+++|++.. +.+|+.+...+.+|.+.|+++|.+
T Consensus 81 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~---- 151 (384)
T 3zrp_A 81 LVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDVIN---- 151 (384)
T ss_dssp EEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHHHH----
T ss_pred EEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHHHH----
Confidence 677788877 444444444589999999999999999999998731 678888889999999999999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+|++||+ |+++|++++.. .. +
T Consensus 152 ----------------l~~~~~~-------~li~D~a~~~~-~~--~--------------------------------- 172 (384)
T 3zrp_A 152 ----------------KIRKYVE-------LIVVDGVSSVG-AE--E--------------------------------- 172 (384)
T ss_dssp ----------------HHGGGEE-------EEEEECTTTTT-TS--C---------------------------------
T ss_pred ----------------HHHhcCC-------EEEEECccccc-Cc--c---------------------------------
Confidence 9999999 99999998755 21 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccC-ccCcch------hhhhc-c---cCccccccCCCCccccc-Cc----cccC-CC
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGA------LHRTF-N---VEPLYLRHENSGLAIDY-MH----WQIP-LS 525 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~------L~~af-~---~~p~YL~~~~~g~~~d~-~~----~tie-~S 525 (943)
.+ . .. ..+|.+++++||+++ ...-+. +.+.+ . ....|+.... ..+. .. .... ++
T Consensus 173 ~~-~----~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 243 (384)
T 3zrp_A 173 VK-A----EE-WNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRN---WLPVMRGAEEGKAAYFAT 243 (384)
T ss_dssp CC-T----TT-TTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHH---HHHHHHHHHTTCCCCSSC
T ss_pred cc-c----cc-cCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHH---HHHHHHhhcccCCCcCCC
Confidence 00 0 01 147999999999886 111111 11111 0 0000100000 0000 00 0000 11
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHH
Q psy11047 526 KR-FRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSV 604 (943)
Q Consensus 526 Rr-frALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~ 604 (943)
-. .....++.++..+...++.+..++ ..
T Consensus 244 ~~~~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~ 272 (384)
T 3zrp_A 244 PPVHVILQLAEAFRLIEKEGIENRIKR---------------------------------------------------HT 272 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HH
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHH---------------------------------------------------HH
Confidence 11 122334445555444445554444 24
Q ss_pred HHHHHHHHHHhCCCCeEEecCC----CccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHH
Q psy11047 605 RLAQKFEALVLGDPRFEIPAAR----HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDD 680 (943)
Q Consensus 605 ~LA~~l~~~L~~~p~~eIl~~~----~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~ed 680 (943)
++++++.+.|++. ++++..+. ..++++|++.+.+ ...+.++|.++|.. +.+.......++|++++..++++|
T Consensus 273 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~-v~~g~~~~~~~iRi~~~~~~~~e~ 348 (384)
T 3zrp_A 273 MVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVAD--PQKVLAGTVNEGVE-FAPGVHPAFKYFRIGHMGWVTPND 348 (384)
T ss_dssp HHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSSC--HHHHHHHHHTTTCC-CEECCCTTCCEEEEECCSSCCHHH
T ss_pred HHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCCC--HHHHHHHHHHCCEE-EecCCCCCcCEEEEeccccCCHHH
Confidence 5677888888877 78877655 4678889987633 57888889888753 333211111789998888899999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11047 681 ITRDWNEIRNTATEI 695 (943)
Q Consensus 681 Id~ll~~I~~~~~~l 695 (943)
|+++++.|+++..++
T Consensus 349 i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 349 AIIAISVIERTLRKL 363 (384)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999886654
No 27
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.78 E-value=5.9e-17 Score=175.91 Aligned_cols=309 Identities=11% Similarity=0.041 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHHhCC-CccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEec
Q psy11047 229 CTELEIITMNWLGKMIGL-PEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS 307 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~-p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S 307 (943)
......++.+++++++|. +.+ ..+||+|||+|+..++.+.+.... .+| -.|+++
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~----------~v~~~~g~t~a~~~~~~~~~~~~~------~~g---------d~vl~~ 119 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAE----------ELVFVRGTTEGINLVANSWGNSNV------RAG---------DNIIIS 119 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGG----------GEEEESSHHHHHHHHHHHTHHHHC------CTT---------CEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCC----------eEEEeCChhHHHHHHHHHhhhhcC------CCC---------CEEEEe
Confidence 455666788999999998 332 689999999999999887653211 122 246777
Q ss_pred CCCchHHHH----HHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 308 DQAHSSVEK----AGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 308 ~~aHySv~K----Aa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+.+|++... .+...+.+++.++.++++.+|+++|+++|+.+ +.+|+.+...+.+|.+.|+++|.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~----- 188 (406)
T 1kmj_A 120 QMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMIT----- 188 (406)
T ss_dssp TTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHH-----
T ss_pred cccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHH-----
Confidence 888877543 23332347889999888999999999998643 678888889999999999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ ++++|++++.+ .. + .
T Consensus 189 ---------------l~~~~~~-------~li~D~~~~~g-~~--~---------------------------------~ 210 (406)
T 1kmj_A 189 ---------------LAHQHGA-------KVLVDGAQAVM-HH--P---------------------------------V 210 (406)
T ss_dssp ---------------HHHHTTC-------EEEEECTTTTT-TS--C---------------------------------C
T ss_pred ---------------HHHHcCC-------EEEEEchhhcC-CC--C---------------------------------C
Confidence 9999999 99999999765 21 0 1
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccCccCcch------hhhhcccCccccccCCCCccccc--------CccccC-CCCCc
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLRVKNSGA------LHRTFNVEPLYLRHENSGLAIDY--------MHWQIP-LSKRF 528 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~------L~~af~~~p~YL~~~~~g~~~d~--------~~~tie-~SRrf 528 (943)
+ ... . .+|.++.++||+++...-+. +.+.+ .+ +..+.......+. ..+.+. ++...
T Consensus 211 ~-~~~----~-~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (406)
T 1kmj_A 211 D-VQA----L-DCDFYVFSGHKLYGPTGIGILYVKEALLQEM--PP-WEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNT 281 (406)
T ss_dssp C-HHH----H-TCSEEEEEGGGTTSCTTCEEEEECHHHHHHC--CC-SSCSTTSEEEEETTTEEEECCTTGGGCCSSCCH
T ss_pred c-ccc----c-CCCEEEEEchhccCCCCcEEEEEeHHHHhhc--CC-cccCCCceeecccccccccCCCchhccCCCCCH
Confidence 1 111 1 36999999999887322111 11111 11 1100000000000 000111 11111
Q ss_pred c-hHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 R-ALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 r-ALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
. +..+..+++.+...++.+..++ ..+++
T Consensus 282 ~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~ 310 (406)
T 1kmj_A 282 GGIIGLGAALEYVSALGLNNIAEY---------------------------------------------------EQNLM 310 (406)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHH---------------------------------------------------HHHHH
Confidence 1 1112123333322233333333 24578
Q ss_pred HHHHHHHhCCCCeEEecCC-CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc---------cCCCcEEEEeecCCCC
Q psy11047 608 QKFEALVLGDPRFEIPAAR-HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS---------LRIQGLGRAQNFTRTT 677 (943)
Q Consensus 608 ~~l~~~L~~~p~~eIl~~~-~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~---------~~g~~~lR~v~~~~tt 677 (943)
+++.+.|++.|++++..+. ..++++|.+++.+ ...+.+.|.++|.+ +.+.. .....++|++++..+|
T Consensus 311 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~g~~~~iRis~~~~~t 387 (406)
T 1kmj_A 311 HYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH--AYDVGSFLDNYGIA-VRTGHHCAMPLMAYYNVPAMCRASLAMYNT 387 (406)
T ss_dssp HHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC--HHHHHHHHHHTTEE-CEEECTTCHHHHHHTTCSCEEEEECCTTCC
T ss_pred HHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC--HHHHHHHHhhCCcE-EEeccccchHHHHhcCCCCeEEEEeecCCC
Confidence 8889999998999988764 6889999986533 46777888888854 43321 1225799999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11047 678 NDDITRDWNEIRNTATE 694 (943)
Q Consensus 678 ~edId~ll~~I~~~~~~ 694 (943)
++|++++++.|+++.+.
T Consensus 388 ~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 388 HEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988654
No 28
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.78 E-value=1.2e-16 Score=172.21 Aligned_cols=306 Identities=11% Similarity=0.058 Sum_probs=198.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe
Q psy11047 227 PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC 306 (943)
Q Consensus 227 PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~ 306 (943)
........++.+++++++|.+.+ ..++|+|||+|+..++.+.+.... .+| -.|++
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~a~~~~~~~~~~~~~------~~g---------d~vl~ 94 (384)
T 1eg5_A 40 IEANLHMEKAREKVAKVLGVSPS----------EIFFTSCATESINWILKTVAETFE------KRK---------RTIIT 94 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGG----------GEEEESCHHHHHHHHHHHHHHHTT------TTC---------CEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC----------eEEEECCHHHHHHHHHHhhhhhcc------CCC---------CEEEE
Confidence 34566777899999999998754 589999999999988887653100 122 24778
Q ss_pred cCCCchHHHHHH---HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 307 SDQAHSSVEKAG---LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 307 S~~aHySv~KAa---~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
++.+|.++..++ ...+.+++.++.+.++.+|+++|+++|+++ +.+|+.+...+.+|.+.|+++|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~----- 163 (384)
T 1eg5_A 95 TPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTR----- 163 (384)
T ss_dssp CTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHH-----
T ss_pred CCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHHHHH-----
Confidence 899999987765 333458889999888999999999998653 677888889999999999999999
Q ss_pred ccccccccccCchHHHHHHcC--CCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYF--PKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRL 461 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~G--l~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~ 461 (943)
+|++|| + |+++|++++.. ..
T Consensus 164 ---------------l~~~~~~~~-------~li~Dea~~~~-~~----------------------------------- 185 (384)
T 1eg5_A 164 ---------------IVKKKNKET-------LVHVDAVQTIG-KI----------------------------------- 185 (384)
T ss_dssp ---------------HHHHHCTTC-------EEEEECTTTTT-TS-----------------------------------
T ss_pred ---------------HHHhcCCce-------EEEEEhhhhcC-Cc-----------------------------------
Confidence 999999 9 99999998632 11
Q ss_pred cccchhhhhcCCCCeeEEEEcCCCccCccCcchhh--hhcccCccccccCCCCcccccCccccCCCCC-cchHHHHHHHH
Q psy11047 462 HCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALH--RTFNVEPLYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIR 538 (943)
Q Consensus 462 ~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~--~af~~~p~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr 538 (943)
.. . +... .+|.+++++||+++...-+.+. ..+...+ ++... +. . .....++-. .....++.+++
T Consensus 186 ~~-~----~~~~-~~di~~~s~sK~~g~~G~G~~~~~~~~~~~~-~~~~~--~~--~--~~~~~~~~~~~~~~a~~~al~ 252 (384)
T 1eg5_A 186 PF-S----LEKL-EVDYASFSAHKFHGPKGVGITYIRKGVPIRP-LIHGG--GQ--E--RGLRSGTQNVPGIVGAARAME 252 (384)
T ss_dssp CC-C----CTTT-CCSEEEEEGGGGTSCTTCEEEEECTTSCCCC-SBCSS--CT--T--TTTBCSCCCHHHHHHHHHHHH
T ss_pred cc-C----chhc-CCCEEEecHHHhcCCCceEEEEEcCCCcccc-ccccC--cc--c--ccccCCCCChHHHHHHHHHHH
Confidence 00 0 1112 4799999999997743312210 0000000 11100 00 0 000011111 11112222232
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCC
Q psy11047 539 NFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDP 618 (943)
Q Consensus 539 ~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p 618 (943)
.. .+.+.+.+++ ..++++++.+.|++ +
T Consensus 253 ~~-~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~-~ 279 (384)
T 1eg5_A 253 IA-VEELSEAAKH---------------------------------------------------MEKLRSKLVSGLMN-L 279 (384)
T ss_dssp HH-HHTHHHHHHH---------------------------------------------------HHHHHHHHHHHHHT-T
T ss_pred HH-HHhHHHHHHH---------------------------------------------------HHHHHHHHHHHhCC-C
Confidence 21 1222222222 24567788888887 7
Q ss_pred CeEEecCC---CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc-c-------------------CCCcEEEEeecCC
Q psy11047 619 RFEIPAAR---HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-L-------------------RIQGLGRAQNFTR 675 (943)
Q Consensus 619 ~~eIl~~~---~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-~-------------------~g~~~lR~v~~~~ 675 (943)
++++..++ ..+++.|.+.+.+ ...+.+.|.++|. ++.+.. . .+..++|+++++.
T Consensus 280 g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~ 356 (384)
T 1eg5_A 280 GAHIITPLEISLPNTLSVSFPNIR--GSTLQNLLSGYGI-YVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKY 356 (384)
T ss_dssp TCEECSCTTSBCTTEEEEECTTCC--HHHHHHHHHHTTE-ECBC------------CHHHHTTCCHHHHHHEEEEECCTT
T ss_pred CeEEeCCcccCCCCEEEEEeCCCC--HHHHHHHHhhCCe-EEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCC
Confidence 89887654 3568889887543 4678888887775 443311 1 0136899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy11047 676 TTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 676 tt~edId~ll~~I~~~~~~l 695 (943)
++++|++++++.|+++.+++
T Consensus 357 ~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 357 NTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999886654
No 29
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.78 E-value=9.9e-18 Score=178.22 Aligned_cols=309 Identities=9% Similarity=-0.008 Sum_probs=198.0
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.+|.....+.++.+++++++|.+.. ....++|+|||+|+..++.+.+ . -.|
T Consensus 27 ~~~~~~~~~~~l~~~la~~~g~~~~--------~~~v~~t~g~t~a~~~~~~~~~--------------------~-d~v 77 (353)
T 2yrr_A 27 LDPEVLRVNRAIQERLAALFDPGEG--------ALVAALAGSGSLGMEAGLANLD--------------------R-GPV 77 (353)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCCTT--------CEEEEESSCHHHHHHHHHHTCS--------------------C-CCE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCC--------CceEEEcCCcHHHHHHHHHHhc--------------------C-CcE
Confidence 3566778888999999999998621 0258999999999988776421 0 125
Q ss_pred EecCCCchHH--HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 305 YCSDQAHSSV--EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 305 ~~S~~aHySv--~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
++++.+|++. .+++...+.+++.++.++++.+|+++|++.|++. .+.+|+.+..++.+|.+.|+++|.+
T Consensus 78 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~---- 148 (353)
T 2yrr_A 78 LVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNPAEAIGA---- 148 (353)
T ss_dssp EEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHH----
T ss_pred EEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecCHHHHHH----
Confidence 6677789885 3444433448899999989999999999999862 2567888899999999999999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+|++||+ |+|+|++|+.. .. +
T Consensus 149 ----------------l~~~~~~-------~li~D~a~~~~-~~--~--------------------------------- 169 (353)
T 2yrr_A 149 ----------------LAKEAGA-------LFFLDAVTTLG-ML--P--------------------------------- 169 (353)
T ss_dssp ----------------HHHHHTC-------EEEEECTTTTT-TS--C---------------------------------
T ss_pred ----------------HHHHcCC-------eEEEEcCcccc-cc--c---------------------------------
Confidence 9999999 99999999643 21 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccCc-cCcch------hhhhcccCc-cccccCCCCcccccCccccCCCCCc-chHHH
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLRV-KNSGA------LHRTFNVEP-LYLRHENSGLAIDYMHWQIPLSKRF-RALKL 533 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~v-r~~~~------L~~af~~~p-~YL~~~~~g~~~d~~~~tie~SRrf-rALkl 533 (943)
.+ ... . .+|.+++++|||++. ..-+. +.+.+...+ .|+.......... .....++... ....+
T Consensus 170 ~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~ 241 (353)
T 2yrr_A 170 FS-MRA----M-GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWE--RGGYHHTTPVLLHYAL 241 (353)
T ss_dssp CC-HHH----H-TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHT--TCCCSSCCCHHHHHHH
T ss_pred cc-ccc----c-CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhh--cCCCCCCCCHHHHHHH
Confidence 11 111 1 359999999997762 11111 111111001 1110000000000 0011122221 12233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHH
Q psy11047 534 WFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEAL 613 (943)
Q Consensus 534 W~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~ 613 (943)
+.++..+...|+.+.+++ ..++++++.+.
T Consensus 242 ~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~ 270 (353)
T 2yrr_A 242 LEALDLVLEEGVAARERR---------------------------------------------------AREVYAWVLEE 270 (353)
T ss_dssp HHHHHHHHHHCHHHHHHH---------------------------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHH---------------------------------------------------HHHHHHHHHHH
Confidence 445555544455554444 24567777777
Q ss_pred HhCCCCeEEecCC--CccEEEEEec-CCChHHHHHHHHHhccCcEEEeecc-cCCCcEEEEeecCCCCHHHHH-HHHHHH
Q psy11047 614 VLGDPRFEIPAAR--HLGMVVIRLL-GENILTEKLLKRLNSKGRLHCVPAS-LRIQGLGRAQNFTRTTNDDIT-RDWNEI 688 (943)
Q Consensus 614 L~~~p~~eIl~~~--~l~iV~Fr~~-g~n~l~~~Ll~~L~~~G~~~~s~t~-~~g~~~lR~v~~~~tt~edId-~ll~~I 688 (943)
|++. ++++..++ ...+++|+++ +.+ ..++.++|.++|. ++.+.. .....++|++++..++++|++ ++++.|
T Consensus 271 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l 346 (353)
T 2yrr_A 271 LKAR-GFRPYPKASPLPTVLVVRPPEGVD--ADRLVRALYAEGV-AVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKAL 346 (353)
T ss_dssp HHHT-TCEESCSSSBCTTEEEEECCTTCC--HHHHHHHHHHTTE-ECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHH
T ss_pred HHHC-CCccccCccCCCeEEEEECCCCCC--HHHHHHHHHHCCE-EEeCCccccCCCeEEEecCccCCHHHHHHHHHHHH
Confidence 7776 88887654 4567789885 333 5678888888875 444322 223568999887777888998 999999
Q ss_pred HHHHH
Q psy11047 689 RNTAT 693 (943)
Q Consensus 689 ~~~~~ 693 (943)
+++.+
T Consensus 347 ~~~l~ 351 (353)
T 2yrr_A 347 DRALA 351 (353)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87643
No 30
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.77 E-value=7.5e-17 Score=174.33 Aligned_cols=341 Identities=8% Similarity=-0.061 Sum_probs=209.3
Q ss_pred CCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHH
Q psy11047 190 QSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASE 269 (943)
Q Consensus 190 ~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTe 269 (943)
..|+++.+.+++...+..+.+.+. ++... ..++....+..++.+++++++|.+.. ...++|+|||+
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~---~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~~---------~~v~~~~gg~~ 85 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGS---LRMIG--HMQKEMLQIMEEIKQGIQYVFQTRNP---------LTLVVSGSGHC 85 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTT---CCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCS---------EEEEESCCTTT
T ss_pred CCccceeccCCCCCCCHHHHHHhc---ccccC--cccHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEeCCcHH
Confidence 456777777766544333333222 21111 23466677888899999999998753 24789999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH--HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHH
Q psy11047 270 STLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV--EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIER 347 (943)
Q Consensus 270 ANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv--~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~ 347 (943)
|+..++.+.. .+| -.|+++..+||+. ..++...+.+++.++.+.++.+|+++|+++|++
T Consensus 86 al~~~~~~~~----------~~g---------d~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~ 146 (393)
T 3kgw_A 86 AMETALFNLL----------EPG---------DSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQ 146 (393)
T ss_dssp HHHHHHHHHC----------CTT---------CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHhcC----------CCC---------CEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh
Confidence 9988876531 122 2355567777743 555544455889999998999999999999987
Q ss_pred hhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccc
Q psy11047 348 DKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFE 427 (943)
Q Consensus 348 d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afe 427 (943)
. .+.+|+.+...+.+|.+.|+++|.+ +|++||+ |+++|++++.. ..
T Consensus 147 ~-----~~~~v~~~~~~nptG~~~~l~~i~~--------------------l~~~~~~-------~li~De~~~~g-~~- 192 (393)
T 3kgw_A 147 H-----KPVLLFLVHGESSTGVVQPLDGFGE--------------------LCHRYQC-------LLLVDSVASLG-GV- 192 (393)
T ss_dssp H-----CCSEEEEESEETTTTEECCCTTHHH--------------------HHHHTTC-------EEEEECTTTTT-TS-
T ss_pred C-----CCcEEEEeccCCcchhhccHHHHHH--------------------HHHHcCC-------EEEEECCcccc-Cc-
Confidence 3 1667888888899999999999999 9999999 99999998733 11
Q ss_pred cccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC-c-------cCcchhhhhc
Q psy11047 428 IPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR-V-------KNSGALHRTF 499 (943)
Q Consensus 428 Lp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-v-------r~~~~L~~af 499 (943)
... .. . ..+|.+++++||+++ . -++. +.+.+
T Consensus 193 ----------------------------------~~~-~~----~-~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~~~~ 231 (393)
T 3kgw_A 193 ----------------------------------PIY-MD----Q-QGIDIMYSSSQKVLNAPPGISLISFNDK-AKYKV 231 (393)
T ss_dssp ----------------------------------CCC-TT----T-TTCCEEEEESSSTTCCCSSCEEEEECHH-HHHHH
T ss_pred ----------------------------------ccc-hh----h-cCCCEEEecCcccccCCCceeEEEECHH-HHHHH
Confidence 000 00 0 246999999999775 1 1111 11111
Q ss_pred cc-----CccccccCC----CCcccccCccccCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc
Q psy11047 500 NV-----EPLYLRHEN----SGLAIDYMHWQIPLSKR-FRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCC 569 (943)
Q Consensus 500 ~~-----~p~YL~~~~----~g~~~d~~~~tie~SRr-frALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~ 569 (943)
.. ..-|+.... .+.. .. .....++-. .....++.++..+...++.+..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~------------------ 291 (393)
T 3kgw_A 232 YSRKTKPVSFYTDITYLAKLWGCE-GE-TRVIHHTTPVTSLYCLRESLALIAEQGLENCWRR------------------ 291 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHTTCS-SS-CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH------------------
T ss_pred hccCCCCCceeecHHHHHHhhhhc-cc-cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH------------------
Confidence 10 000110000 0000 00 000001111 112233344444444444544444
Q ss_pred cchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC----CccEEEEEecCCChHHHHH
Q psy11047 570 LGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR----HLGMVVIRLLGENILTEKL 645 (943)
Q Consensus 570 ~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~----~l~iV~Fr~~g~n~l~~~L 645 (943)
..++++++.+.|++. ++++..+. ...+++|++... ....++
T Consensus 292 ---------------------------------~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 336 (393)
T 3kgw_A 292 ---------------------------------HREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAG-YNWRDI 336 (393)
T ss_dssp ---------------------------------HHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTT-BCHHHH
T ss_pred ---------------------------------HHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCC-CCHHHH
Confidence 245677788888777 77776432 245667887531 125678
Q ss_pred HHHHhcc-CcEEEeecc-cCCCcEEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q psy11047 646 LKRLNSK-GRLHCVPAS-LRIQGLGRAQN-FTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 646 l~~L~~~-G~~~~s~t~-~~g~~~lR~v~-~~~tt~edId~ll~~I~~~~~~ 694 (943)
.++|.++ |. ++.+.. ..+..++|+++ +..++++|++++++.|+++.++
T Consensus 337 ~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 337 VSYVLDHFSI-EISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp HHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCE-EEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 8888877 75 444322 23456999976 6667999999999999887654
No 31
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.77 E-value=4.7e-17 Score=183.30 Aligned_cols=331 Identities=13% Similarity=0.028 Sum_probs=208.9
Q ss_pred HHHHHHHHHHhccCccccCC-hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHh
Q psy11047 207 LLGDMLSDAINCLGFTWASS-PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRK 285 (943)
Q Consensus 207 ilgd~L~~alN~n~~~~~~S-PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~ 285 (943)
.+.+.+....+.+...|..+ +....+...+.+|+++++|.+.+ ..+||+|+|+++..++.+..
T Consensus 86 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~----------~v~~t~g~t~al~~~~~~~~------ 149 (465)
T 3e9k_A 86 YLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK----------EIALMNALTVNLHLLMLSFF------ 149 (465)
T ss_dssp HHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG----------GEEECSCHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC----------CEEEECCHHHHHHHHHHHhc------
Confidence 34555544444443333322 23334556689999999999754 68999999999877766531
Q ss_pred hcccCCCchhhhcCCceEEEecCCCchHHHH----HHH-HCCcc----EEEEecCCCCCcCHHHHHHHHHHhhccCCCcE
Q psy11047 286 YQQSHPELEHAEINSRLVAYCSDQAHSSVEK----AGL-IGLVN----MRYIESDDKLSLRGDKLIEAIERDKKKHLIPF 356 (943)
Q Consensus 286 ~~~~~pGl~~~~i~~~~vV~~S~~aHySv~K----Aa~-LG~~~----v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~ 356 (943)
.++ ..+..|+++..+|.+... .+. .|..- +..+|.++++.+|+++|+++|++... .+.
T Consensus 150 ----~~~------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~---~~~ 216 (465)
T 3e9k_A 150 ----KPT------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD---SIA 216 (465)
T ss_dssp ----CCC------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG---GEE
T ss_pred ----ccc------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC---CeE
Confidence 122 123458889999988544 343 45431 45667788899999999999985311 267
Q ss_pred EEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccce
Q psy11047 357 FIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGM 436 (943)
Q Consensus 357 ~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~ 436 (943)
+|+.+..++.+|.+.|+++|.+ +|++||+ ++++|+|++.+ .. +
T Consensus 217 lv~~~~~~n~tG~~~~l~~i~~--------------------la~~~g~-------~vi~D~a~~~g-~~--~------- 259 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFNIPAITK--------------------AGQAKGC-------YVGFDLAHAVG-NV--E------- 259 (465)
T ss_dssp EEEEESBCTTTCBBCCHHHHHH--------------------HHHHTTC-------EEEEECTTTTT-TS--C-------
T ss_pred EEEEeCcccCcceeecHHHHHH--------------------HHHHcCC-------EEEEEhhhhcC-Cc--C-------
Confidence 8899999999999999999999 9999999 99999999866 22 1
Q ss_pred eeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC--ccCcchh--hhhc--ccCccccccCC
Q psy11047 437 VVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR--VKNSGAL--HRTF--NVEPLYLRHEN 510 (943)
Q Consensus 437 VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~--vr~~~~L--~~af--~~~p~YL~~~~ 510 (943)
. .... ..+|.+++++||+++ ...-..+ ...+ ...+ ++.+-.
T Consensus 260 --------------------------~-~~~~-----~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~-~~~g~~ 306 (465)
T 3e9k_A 260 --------------------------L-YLHD-----WGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP-ALVGWF 306 (465)
T ss_dssp --------------------------C-CHHH-----HTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCC-SSCCGG
T ss_pred --------------------------C-chhh-----cCCCEEEECcccccccCCCceEEEEEcHHHHhhcCC-cccCcc
Confidence 1 1111 157999999999993 1111111 0000 0011 111000
Q ss_pred CCc---ccccC-cccc-CCCCCc--------chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhc
Q psy11047 511 SGL---AIDYM-HWQI-PLSKRF--------RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVK 577 (943)
Q Consensus 511 ~g~---~~d~~-~~ti-e~SRrf--------rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~ 577 (943)
.+. .+... .+++ .+.+++ ....++.++..+...|+.+..++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~-------------------------- 360 (465)
T 3e9k_A 307 GHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKK-------------------------- 360 (465)
T ss_dssp GBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH--------------------------
T ss_pred CCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHH--------------------------
Confidence 000 00000 0111 111222 23445555555554444444444
Q ss_pred ccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCC----------CCeEEecCC----CccEEEEEecCCChHHH
Q psy11047 578 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD----------PRFEIPAAR----HLGMVVIRLLGENILTE 643 (943)
Q Consensus 578 ~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~----------p~~eIl~~~----~l~iV~Fr~~g~n~l~~ 643 (943)
..++++++.+.|.+. +++++..+. ..++++|++.. + ..
T Consensus 361 -------------------------~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~-~--~~ 412 (465)
T 3e9k_A 361 -------------------------SVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV-P--NK 412 (465)
T ss_dssp -------------------------HHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-T--TC
T ss_pred -------------------------HHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-C--HH
Confidence 345677777777764 789998765 37899999862 1 35
Q ss_pred HHHHHHhccCcEEEeecccCCCcEEEEee-cCCCCHHHHHHHHHHHHHHHHH
Q psy11047 644 KLLKRLNSKGRLHCVPASLRIQGLGRAQN-FTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 644 ~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~-~~~tt~edId~ll~~I~~~~~~ 694 (943)
.+.++|.++|.+ +. ..++.++|+++ +..++.+||+++++.|+++.++
T Consensus 413 ~l~~~L~~~Gi~-v~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 413 DVFQELEKRGVV-CD---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp CHHHHHHTTTEE-CE---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCEE-Ee---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 778888888854 33 34568999976 8999999999999999887643
No 32
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.76 E-value=1.5e-16 Score=172.88 Aligned_cols=335 Identities=11% Similarity=0.037 Sum_probs=207.4
Q ss_pred CCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHH
Q psy11047 191 SPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASES 270 (943)
Q Consensus 191 sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeA 270 (943)
++.|+.+-.+...++.++..+ ...+.. ..++........+.+++++++|.+.+ ..++|+|||+|
T Consensus 8 ~~~yl~~~~~~~~~~~v~~a~-~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~----------~v~~t~g~t~a 71 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPEVLRGL-GRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK----------PVILHGEPVLG 71 (392)
T ss_dssp CCSEECSSSCCCCCHHHHHHT-TSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC----------CEEESSCTHHH
T ss_pred CcceeecCCCcCCCHHHHHHH-hccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC----------EEEEeCCchHH
Confidence 445655543334445544322 222211 12456667777899999999998643 68999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHH--HHHH-HCCccEEEEecCCCCCcCHHHHHHHHHH
Q psy11047 271 TLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVE--KAGL-IGLVNMRYIESDDKLSLRGDKLIEAIER 347 (943)
Q Consensus 271 NL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~--KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~ 347 (943)
+..++.+.. .+| -.|++++.+|++.. +.+. .|. +++.++++.++.+|+++|+++|+.
T Consensus 72 ~~~~~~~~~----------~~g---------d~Vl~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~l~~ 131 (392)
T 2z9v_A 72 LEAAAASLI----------SPD---------DVVLNLASGVYGKGFGYWAKRYSP-HLLEIEVPYNEAIDPQAVADMLKA 131 (392)
T ss_dssp HHHHHHHHC----------CTT---------CCEEEEESSHHHHHHHHHHHHHCS-CEEEEECCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHhc----------CCC---------CEEEEecCCcccHHHHHHHHHcCC-ceEEeeCCCCCCCCHHHHHHHHhc
Confidence 988877641 122 23677788898863 2222 454 789999988899999999999975
Q ss_pred hhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccc
Q psy11047 348 DKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFE 427 (943)
Q Consensus 348 d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afe 427 (943)
.. .+.+|+.+..++.+|.+.|+++|.+ +|++||+ |+++|++++.. ..
T Consensus 132 ~~----~~~~v~~~~~~nptG~~~~l~~i~~--------------------l~~~~~~-------~li~D~a~~~g-~~- 178 (392)
T 2z9v_A 132 HP----EITVVSVCHHDTPSGTINPIDAIGA--------------------LVSAHGA-------YLIVDAVSSFG-GM- 178 (392)
T ss_dssp CT----TCCEEEEESEEGGGTEECCHHHHHH--------------------HHHHTTC-------EEEEECTTTBT-TB-
T ss_pred CC----CCcEEEEeccCCCCceeccHHHHHH--------------------HHHHcCC-------eEEEEcccccC-Cc-
Confidence 21 2567888899999999999999999 9999999 99999999754 21
Q ss_pred cccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCc-cCcch------hhhhcc
Q psy11047 428 IPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRV-KNSGA------LHRTFN 500 (943)
Q Consensus 428 Lp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~v-r~~~~------L~~af~ 500 (943)
+ .+ .. .. .+|.++.++|||++. ..-+. +.+.+.
T Consensus 179 -~---------------------------------~~-~~----~~-~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~ 218 (392)
T 2z9v_A 179 -K---------------------------------TH-PE----DC-KADIYVTGPNKCLGAPPGLTMMGVSERAWAKMK 218 (392)
T ss_dssp -S---------------------------------CC-GG----GG-TCSEEEECSSSTTCCCSCCEEEEECHHHHHHHH
T ss_pred -c---------------------------------cc-cc----cc-cceEEEecCcccccCCCceeEEEECHHHHHHhh
Confidence 0 11 11 11 369999999997661 11111 111111
Q ss_pred c-C--c--cccccCCCCcccccCcc----ccCCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Q psy11047 501 V-E--P--LYLRHENSGLAIDYMHW----QIPLSKRFR-ALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCL 570 (943)
Q Consensus 501 ~-~--p--~YL~~~~~g~~~d~~~~----tie~SRrfr-ALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~ 570 (943)
. . + .|+... .....+ ...++...- ...++.+++.+...|+.+..++
T Consensus 219 ~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~------------------- 274 (392)
T 2z9v_A 219 ANPLAPRASMLSIV-----DWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWAR------------------- 274 (392)
T ss_dssp TCTTSCCSSTTCSG-----GGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH-------------------
T ss_pred hccCCCCceeccHH-----HHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH-------------------
Confidence 0 0 0 111100 000000 001111111 1233344444433344444443
Q ss_pred chhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC----CccEEEEEec-CCChHHHHH
Q psy11047 571 GTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR----HLGMVVIRLL-GENILTEKL 645 (943)
Q Consensus 571 g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~----~l~iV~Fr~~-g~n~l~~~L 645 (943)
..++++++.+.|++. ++++..++ ..+++.|+++ +.+ ..++
T Consensus 275 --------------------------------~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l 319 (392)
T 2z9v_A 275 --------------------------------HALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGVD--EKAL 319 (392)
T ss_dssp --------------------------------HHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTCC--HHHH
T ss_pred --------------------------------HHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCCCC--HHHH
Confidence 235667777777766 77777633 4778899985 333 4678
Q ss_pred HHHHhcc-CcEEEeec-ccCCCcEEEEe-ecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 646 LKRLNSK-GRLHCVPA-SLRIQGLGRAQ-NFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 646 l~~L~~~-G~~~~s~t-~~~g~~~lR~v-~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.++|.++ |.. +.+. ......++|++ ..+.++++|++++++.|+++.++
T Consensus 320 ~~~L~~~~gi~-v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 320 RQAARARYGVV-FSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp HHHHHHHHCEE-CEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCEE-EecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 8888887 754 4332 22346799997 45588999999999999887543
No 33
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.75 E-value=4.4e-17 Score=177.59 Aligned_cols=143 Identities=12% Similarity=0.025 Sum_probs=114.7
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 224 ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 224 ~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
..+.....+..++.+++++++|.+.+ ..++|+|||+|+..++.+...+..+ +| +..
T Consensus 56 ~~~~~~~~~~~~l~~~la~~~~~~~~----------~v~~~~g~t~al~~~~~~l~~~~~~------~g--------d~~ 111 (400)
T 3vax_A 56 EYGIRAKRGVERAREYLASTVSAEPD----------ELIFTSGATESNNIALLGLAPYGER------TG--------RRH 111 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGG----------GEEEESCHHHHHHHHHHTTHHHHHH------HT--------CCE
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCC----------cEEEeCCHHHHHHHHHHHHHHhhcc------CC--------CCE
Confidence 33445567777899999999999754 6899999999999888876422111 11 214
Q ss_pred EEecCCCchHHHHHHH-H--CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 304 AYCSDQAHSSVEKAGL-I--GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 304 V~~S~~aHySv~KAa~-L--G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
|+++..+|.++..++. + .+.+++.++++.++.+|+++|+++|+++ +.+|+.+...+.+|.+.|+++|.+
T Consensus 112 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~-- 183 (400)
T 3vax_A 112 IITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPD------TLLVSLMHVNNETGVIQPVAELAQ-- 183 (400)
T ss_dssp EEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTT------EEEEECCSBCTTTCBBCCHHHHHH--
T ss_pred EEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCC------ceEEEEECCCCCceeeCcHHHHHH--
Confidence 7788999999888763 3 3458899999999999999999988653 678888888999999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+++|++++..
T Consensus 184 ------------------la~~~~~-------~li~D~a~~~~ 201 (400)
T 3vax_A 184 ------------------QLRATPT-------YLHVDAAQGYG 201 (400)
T ss_dssp ------------------HHTTSSC-------EEEEECTTTTT
T ss_pred ------------------HHHhcCC-------EEEEEhhhhcC
Confidence 9999999 99999999754
No 34
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.75 E-value=3.1e-16 Score=173.58 Aligned_cols=185 Identities=11% Similarity=0.058 Sum_probs=126.9
Q ss_pred eeEEccCCCChHHHHHHHHHHHHhccC---ccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHH
Q psy11047 194 MHAYFPALNSYPSLLGDMLSDAINCLG---FTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASES 270 (943)
Q Consensus 194 f~g~~~~~~s~~silgd~L~~alN~n~---~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeA 270 (943)
|+.+-.+...++.++..+....-+..+ ..|..++....+...+.+++++++|.+.+ ..+||+|||+|
T Consensus 21 ~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~a 90 (432)
T 3a9z_A 21 YMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ----------DIIFTSGGTES 90 (432)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG----------GEEEESCHHHH
T ss_pred EeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC----------eEEEeCChHHH
Confidence 444333333455555444333322111 12333445677888999999999998643 68999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCc----hhhhcCCceEEEecCCCchHHHHHHH-H---CCccEEEEecCC-CCCcCHHHH
Q psy11047 271 TLICLLAGRTEAIRKYQQSHPEL----EHAEINSRLVAYCSDQAHSSVEKAGL-I---GLVNMRYIESDD-KLSLRGDKL 341 (943)
Q Consensus 271 NL~AL~aAR~~~l~~~~~~~pGl----~~~~i~~~~vV~~S~~aHySv~KAa~-L---G~~~v~~Vp~D~-~grmD~daL 341 (943)
+..++.+....+..... .+|- ..........+++|..+|.|+.++.. + .+.+++.|+++. ++.+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~--~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQT--LQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHH--HC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHH
T ss_pred HHHHHHHHHhhhhhccc--cCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHH
Confidence 99998876432111000 0110 00001122468889999999988762 2 455889999875 889999999
Q ss_pred HHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcC----------CCCCccc
Q psy11047 342 IEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYF----------PKFQSVR 411 (943)
Q Consensus 342 e~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~G----------l~~~~l~ 411 (943)
+++|+.+ +.+|+.+..++.+|.+.|+++|.+ +|+++| +
T Consensus 169 ~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~--------------------l~~~~~~~~~~~~~~~~------ 216 (432)
T 3a9z_A 169 LAAVRPT------TCLVTIMLANNETGVIMPISEISR--------------------RIKALNQIRAASGLPRV------ 216 (432)
T ss_dssp HHTCCTT------EEEEECCSBCTTTCBBCCHHHHHH--------------------HHHHHHHHHHHHTCCCC------
T ss_pred HHhccCC------ceEEEEECcccCcccccCHHHHHH--------------------HHHhcCcccccccCCce------
Confidence 9988643 678888999999999999999999 999999 9
Q ss_pred hhhhHHhhhcCC
Q psy11047 412 LAQKFEALVLGD 423 (943)
Q Consensus 412 lwLHVDAA~GG~ 423 (943)
|+|+|+||+.+
T Consensus 217 -~livDea~~~~ 227 (432)
T 3a9z_A 217 -LVHTDAAQALG 227 (432)
T ss_dssp -EEEEECTTTTT
T ss_pred -EEEEEchhhhC
Confidence 99999999654
No 35
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.74 E-value=1.9e-16 Score=173.31 Aligned_cols=312 Identities=10% Similarity=0.003 Sum_probs=195.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|..++.......++.+++++++|.+.. ..+||+|||+++..++.+... .. .+ ..
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~al~~~~~~l~~----~~---~~---------gd 114 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPG----------GVVLGADRAVLLSLLAEASSS----RA---GL---------GY 114 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGG----------GEEEESCHHHHHHHHHHHTGG----GG---BT---------TC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCC----------eEEEeCChHHHHHHHHHHHhh----cc---CC---------CC
Confidence 333334566777889999999998643 689999999998766543210 00 11 23
Q ss_pred EEEecCCCchHHHHHHH-H---CCccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhh
Q psy11047 303 VAYCSDQAHSSVEKAGL-I---GLVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLG 377 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~-L---G~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa 377 (943)
.|+++..+|.++..+.. + .+.+++.++.+ +++.+|+++|++.|+++ +.+|+.+..++.+|.+.|+++|.
T Consensus 115 ~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~ 188 (406)
T 3cai_A 115 EVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDLRAMT 188 (406)
T ss_dssp EEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCCHHHH
T ss_pred EEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCHHHHH
Confidence 47778899998766652 2 23478899988 78999999999998643 67888899999999999999999
Q ss_pred hhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhc
Q psy11047 378 TAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNS 457 (943)
Q Consensus 378 ~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~ 457 (943)
+ +|+++|+ |+++|+|++.. .. +
T Consensus 189 ~--------------------l~~~~~~-------~li~D~a~~~g-~~--~---------------------------- 210 (406)
T 3cai_A 189 K--------------------LVHDVGA-------LVVVDHSAAAP-YR--L---------------------------- 210 (406)
T ss_dssp H--------------------HHHHTTC-------EEEEECTTTTT-TC--C----------------------------
T ss_pred H--------------------HHHHcCC-------EEEEEcccccC-CC--C----------------------------
Confidence 9 9999999 99999999754 21 0
Q ss_pred cCcccccchhhhhcCCCCeeEEEEcCCCccCccCcc-hhhhhcccCccccccCCCCcccccC---cccc-CCCCCcchH-
Q psy11047 458 KGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSG-ALHRTFNVEPLYLRHENSGLAIDYM---HWQI-PLSKRFRAL- 531 (943)
Q Consensus 458 ~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~-~L~~af~~~p~YL~~~~~g~~~d~~---~~ti-e~SRrfrAL- 531 (943)
.+ ... + .+|.+++++|||++.+ .+ .+. ....++..-... ...++ ...+ .++-..-++
T Consensus 211 -----~~-~~~-~----~~d~~~~s~~K~~g~~-~G~~~~----~~~~~~~~l~~~-~~~~~~~~~~~~~~~t~~~~~~~ 273 (406)
T 3cai_A 211 -----LD-IRE-T----DADVVTVNAHAWGGPP-IGAMVF----RDPSVMNSFGSV-STNPYATGPARLEIGVHQFGLLA 273 (406)
T ss_dssp -----CC-HHH-H----CCSEEEEEGGGGTSCS-CEEEEE----SCHHHHHTSCCC-CSCTTCCGGGGGCCSCCCHHHHH
T ss_pred -----CC-chh-c----CCCEEEeehhhhcCCC-cCeEEE----EehHHHhhcCCc-ccCCCCCccccccCCCccHHHHH
Confidence 11 111 1 3699999999998743 32 221 011111000000 00000 0001 111111111
Q ss_pred HHHHHHHHHHHHH----------HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcH
Q psy11047 532 KLWFVIRNFGIKG----------LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKF 601 (943)
Q Consensus 532 klW~tLr~~G~~G----------l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~ 601 (943)
.+-.++..+-..| +.+.++++. +.
T Consensus 274 a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~-----------------------~~----------------------- 307 (406)
T 3cai_A 274 GVVASIEYLAALDESARGSRRERLAVSMQSAD-----------------------AY----------------------- 307 (406)
T ss_dssp HHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHH-----------------------HH-----------------------
T ss_pred HHHHHHHHHHHhccccccchhhhhhhhHHHHH-----------------------HH-----------------------
Confidence 1111121111000 111112110 00
Q ss_pred HHHHHHHHHHHHHhCCCCeEEecCC--CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc---------c-CCCcEEE
Q psy11047 602 QSVRLAQKFEALVLGDPRFEIPAAR--HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS---------L-RIQGLGR 669 (943)
Q Consensus 602 ~~~~LA~~l~~~L~~~p~~eIl~~~--~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~---------~-~g~~~lR 669 (943)
..++++++.+.|++.|++++..+. ..++++|++.+.+ ..++.+.|.++|. .+.+.. . .+..++|
T Consensus 308 -~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~~~gi-~v~~g~~~~~~~~~g~~~~~~~iR 383 (406)
T 3cai_A 308 -LNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP--ADRVVQRLADNGI-LAIANTGSRVLDVLGVNDVGGAVT 383 (406)
T ss_dssp -HHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC--HHHHHHHHHHTTE-ECEECCSCHHHHHHTTTTTTCCEE
T ss_pred -HHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC--HHHHHHHHHHCCc-EEecCChHHHHHHcCCCCCCCeEE
Confidence 356788899999999999987653 4778999987543 4678888888775 444321 1 1347899
Q ss_pred EeecCCCCHHHHHHHHHHHHHH
Q psy11047 670 AQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 670 ~v~~~~tt~edId~ll~~I~~~ 691 (943)
++++..++++||+++++.|+++
T Consensus 384 is~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 384 VGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EECCTTCCHHHHHHHHHHHHTC
T ss_pred EEeecCCCHHHHHHHHHHHHHh
Confidence 9999999999999999998754
No 36
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.74 E-value=3.5e-16 Score=170.12 Aligned_cols=311 Identities=12% Similarity=-0.007 Sum_probs=192.9
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
+|.......++.+++++++|.+.. ...++|+|||+|+..++.+.. .+| -.|+
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~---------~~i~~~~g~t~a~~~~~~~~~----------~~g---------d~vl 98 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNI---------ATFCLSASGHGGMEATLCNLL----------EDG---------DVIL 98 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCS---------EEEEESSCHHHHHHHHHHHHC----------CTT---------CEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEcCcHHHHHHHHHHHHh----------CCC---------CEEE
Confidence 455667788899999999998642 157899999999988877641 122 2466
Q ss_pred ecCCCchHHH--HHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 306 CSDQAHSSVE--KAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 306 ~S~~aHySv~--KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++.+|++.. +.+...+..++.++.+.++.+|+++|+++|++. .+.+|+.+..++.+|.+.|+++|.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~----- 168 (393)
T 2huf_A 99 IGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVGA----- 168 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHH-----
T ss_pred EECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHHH-----
Confidence 7778898842 222223347889999888899999999999862 1567888888999999999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ |+++|++++.. .. ..
T Consensus 169 ---------------~~~~~~~-------~li~D~a~~~~-~~-----------------------------------~~ 190 (393)
T 2huf_A 169 ---------------LCHQHNC-------LLIVDTVASLG-GA-----------------------------------PM 190 (393)
T ss_dssp ---------------HHHHTTC-------EEEEECTTTBT-TB-----------------------------------CC
T ss_pred ---------------HHHHcCC-------EEEEEcccccC-CC-----------------------------------Cc
Confidence 9999999 99999997643 11 00
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccC-ccCcc------hhhhhcccC----ccccccCCCCcccc-cCc---ccc-CCCCC
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLR-VKNSG------ALHRTFNVE----PLYLRHENSGLAID-YMH---WQI-PLSKR 527 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~------~L~~af~~~----p~YL~~~~~g~~~d-~~~---~ti-e~SRr 527 (943)
. +.. ..+|.+++++|||++ ...-+ .+.+.+... .+|..... ...+ ++. ... .++-.
T Consensus 191 ~-----~~~-~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 262 (393)
T 2huf_A 191 F-----MDR-WEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMS--LVGDYWGCFGRPRIYHHTIS 262 (393)
T ss_dssp C-----TTT-TTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH--HHHHHTTCSSSCCCCSCCCC
T ss_pred c-----hhh-cCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchH--HHHhhhccccccCCCCCCCC
Confidence 0 111 147999999999865 11111 111111110 11111000 0000 000 000 01111
Q ss_pred cc-hHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHH
Q psy11047 528 FR-ALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRL 606 (943)
Q Consensus 528 fr-ALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~L 606 (943)
.- ...+..+++.+...++.+..++ ..++
T Consensus 263 ~~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~ 291 (393)
T 2huf_A 263 STLLYGLREAIAMACEEGLPALIAR---------------------------------------------------HEDC 291 (393)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHH---------------------------------------------------HHHH
Confidence 11 1122223333332334444433 2456
Q ss_pred HHHHHHHHhCCCCeEEecCC--Cc-cEEEEEec-CCChHHHHHHHHHhcc-CcEEEeecc-cCCCcEEEEee-cCCCCHH
Q psy11047 607 AQKFEALVLGDPRFEIPAAR--HL-GMVVIRLL-GENILTEKLLKRLNSK-GRLHCVPAS-LRIQGLGRAQN-FTRTTND 679 (943)
Q Consensus 607 A~~l~~~L~~~p~~eIl~~~--~l-~iV~Fr~~-g~n~l~~~Ll~~L~~~-G~~~~s~t~-~~g~~~lR~v~-~~~tt~e 679 (943)
++++.+.|++. ++++..++ .. ++++|+++ +.+ ..++.++|.++ |. ++.+.. ..+..++|+++ ++.++++
T Consensus 292 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~~~~gi-~v~~g~~~~~~~~~Ri~~~~~~~~~e 367 (393)
T 2huf_A 292 AKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGVD--WLKAAQYAMKTYLV-EISGGLGPTAGQVFRIGLMGQNATTE 367 (393)
T ss_dssp HHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTCC--HHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCSHH
T ss_pred HHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCCC--HHHHHHHHHHhCCE-EEecCcccccCCEEEEEcccCcCCHH
Confidence 67777777776 77776543 23 48888885 333 46788888765 74 444322 12457999977 5567899
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11047 680 DITRDWNEIRNTATEI 695 (943)
Q Consensus 680 dId~ll~~I~~~~~~l 695 (943)
+++++++.|+++.+++
T Consensus 368 ~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 368 RVDRVLQVFQEAVAAV 383 (393)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999998876543
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.73 E-value=3e-16 Score=167.46 Aligned_cols=304 Identities=9% Similarity=-0.045 Sum_probs=192.3
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.++.......++.+++++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|
T Consensus 28 ~~~~~~~~~~~l~~~la~~~g~~~~----------~i~~~~g~t~a~~~~~~~~~----------~~g---------d~v 78 (352)
T 1iug_A 28 RTEAAREVFLKARGLLREAFRTEGE----------VLILTGSGTLAMEALVKNLF----------APG---------ERV 78 (352)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSSE----------EEEEESCHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCc----------eEEEcCchHHHHHHHHHhcc----------CCC---------CeE
Confidence 4566667778899999999998743 58999999999988877641 122 247
Q ss_pred EecCCCchHHH--HHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 305 YCSDQAHSSVE--KAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 305 ~~S~~aHySv~--KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
++++.+|++.. +.+...+.+++.++++.++.+|+++|++ . .+.+|+.+..++.+|.+.|+++|.+
T Consensus 79 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~l~~i~~---- 145 (352)
T 1iug_A 79 LVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---E------GYAGLLLVHSETSTGALADLPALAR---- 145 (352)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---S------SCSEEEEESEETTTTEECCHHHHHH----
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---c------CCcEEEEEEecCCcceecCHHHHHH----
Confidence 77888999975 2222233488999998889999988876 1 2567888899999999999999999
Q ss_pred cccccccccccCchHHHHHHc--CCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSY--FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGR 460 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~--Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~ 460 (943)
+|++| |+ |+|+|++++.. .. +
T Consensus 146 ----------------l~~~~~~~~-------~li~D~a~~~~-~~--~------------------------------- 168 (352)
T 1iug_A 146 ----------------AFKEKNPEG-------LVGADMVTSLL-VG--E------------------------------- 168 (352)
T ss_dssp ----------------HHHHHCTTC-------EEEEECTTTBT-TB--C-------------------------------
T ss_pred ----------------HHHhhCCCC-------EEEEECCcccc-Cc--c-------------------------------
Confidence 99999 99 99999998743 21 0
Q ss_pred ccccchhhhhcCCCCeeEEEEcCCCccCccCc-chhhhhcccCccccccC-CCCcccccC-------ccccCCCCCcch-
Q psy11047 461 LHCVPASLRIQGLGRAQNFTIVPSSLLRVKNS-GALHRTFNVEPLYLRHE-NSGLAIDYM-------HWQIPLSKRFRA- 530 (943)
Q Consensus 461 ~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~L~~af~~~p~YL~~~-~~g~~~d~~-------~~tie~SRrfrA- 530 (943)
.+ .. .. .+|.++.++|||++...+ +.+. .....+..- ..+...++. .....++-..-+
T Consensus 169 --~~-~~----~~-~~d~~~~s~~K~~~~~~g~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (352)
T 1iug_A 169 --VA-LE----AM-GVDAAASGSQKGLMCPPGLGFVA----LSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLV 236 (352)
T ss_dssp --CC-SG----GG-TCSEEEEESSSTTCCCSCEEEEE----ECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHH
T ss_pred --ee-cc----cc-CeeEEEecCcccccCCCceeEEE----ECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHH
Confidence 11 11 11 369999999997762111 1110 000000000 000000000 000011111101
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHH
Q psy11047 531 LKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKF 610 (943)
Q Consensus 531 LklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l 610 (943)
..+..++..+... +.+..++ ..++++++
T Consensus 237 ~a~~~al~~~~~~-~~~~~~~---------------------------------------------------~~~~~~~l 264 (352)
T 1iug_A 237 LAVAAVLEEVLPR-LEEHLAL---------------------------------------------------KAWQNALL 264 (352)
T ss_dssp HHHHHHHHHHGGG-HHHHHHH---------------------------------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHH---------------------------------------------------HHHHHHHH
Confidence 1111222221111 2222222 24567778
Q ss_pred HHHHhCCCCeEEecCC-CccEEEEEec-CCChHHHHHHHHHhccCcEEEeeccc-CCCcEEEEeecCCCCHHHHHHHHHH
Q psy11047 611 EALVLGDPRFEIPAAR-HLGMVVIRLL-GENILTEKLLKRLNSKGRLHCVPASL-RIQGLGRAQNFTRTTNDDITRDWNE 687 (943)
Q Consensus 611 ~~~L~~~p~~eIl~~~-~l~iV~Fr~~-g~n~l~~~Ll~~L~~~G~~~~s~t~~-~g~~~lR~v~~~~tt~edId~ll~~ 687 (943)
.+.|++. ++++..+. ..+++.|+++ +.+ ..++.++|.++|. ++.+... .+..++|++++..++++|++++++.
T Consensus 265 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 340 (352)
T 1iug_A 265 YGVGEEG-GLRPVPKRFSPAVAAFYLPEGVP--YARVKEAFAQRGA-VIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGM 340 (352)
T ss_dssp HHHHHHT-TCEESCSSBCTTCEEEECCTTCC--HHHHHHHHHTTTE-ECEECCGGGTTTEEEECCCSSCCHHHHHHHHHH
T ss_pred HHHHHHC-CCcccccccCCeEEEEEcCCCCC--HHHHHHHHHHCCE-EEEeCCCccCCCEEEEEccccCCHHHHHHHHHH
Confidence 8888777 88887654 6778999986 333 4678888888875 4544321 2457899988888999999999999
Q ss_pred HHHHHHHH
Q psy11047 688 IRNTATEI 695 (943)
Q Consensus 688 I~~~~~~l 695 (943)
|+++.+++
T Consensus 341 l~~~~~~~ 348 (352)
T 1iug_A 341 FREVLEEI 348 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99887654
No 38
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.73 E-value=7.8e-17 Score=172.10 Aligned_cols=305 Identities=9% Similarity=-0.026 Sum_probs=188.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe
Q psy11047 227 PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC 306 (943)
Q Consensus 227 PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~ 306 (943)
.....+...+.+|+++++|.+.+ ..+||+|||+|+..++.+++. +| -.|++
T Consensus 45 ~g~~~~~~~~~~~l~~~~g~~~~----------~v~~~~g~t~a~~~~~~~~~~----------~g---------d~vl~ 95 (359)
T 1svv_A 45 YGQDSHCAKAARLIGELLERPDA----------DVHFISGGTQTNLIACSLALR----------PW---------EAVIA 95 (359)
T ss_dssp TTCSHHHHHHHHHHHHHHTCTTS----------EEEEESCHHHHHHHHHHHHCC----------TT---------EEEEE
T ss_pred ccccHHHHHHHHHHHHHhCCCCc----------cEEEeCCchHHHHHHHHHHhC----------CC---------CEEEE
Confidence 33456778899999999997643 689999999999998876531 22 35788
Q ss_pred cCCCchHHHHH--HHHCCccEEEEecCCCCCcCHHHHHHHHHHhh-ccCCCcEEEEEecCCCccccccc---HHHhhhhc
Q psy11047 307 SDQAHSSVEKA--GLIGLVNMRYIESDDKLSLRGDKLIEAIERDK-KKHLIPFFIFSGLALPAFLVVDS---YCCLGTAM 380 (943)
Q Consensus 307 S~~aHySv~KA--a~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~-~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~ 380 (943)
++.+|++...+ +...+.+++.+|.+ ++.+|+++|++.|+++. .++..+.+|+.+.. +.+|.+.| +++|.+
T Consensus 96 ~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~-- 171 (359)
T 1svv_A 96 TQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISA-- 171 (359)
T ss_dssp ETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHH--
T ss_pred cccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHH--
Confidence 89999998884 44334488899986 78999999999998752 23334667777766 57899887 888888
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcc-ccccccccceeeeeecchhhhHHHHHHHhhccC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF-EIPAARHLGMVVIRLLGENILTEKLLKRLNSKG 459 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~af-eLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G 459 (943)
+|++||+ |+|+|++++++ .+ .++
T Consensus 172 ------------------~~~~~~~-------~li~De~~~~~-~~~~~~------------------------------ 195 (359)
T 1svv_A 172 ------------------SCKEHGL-------YLFLDGARLAS-ALSSPV------------------------------ 195 (359)
T ss_dssp ------------------HHHHHTC-------EEEEECTTHHH-HHTSTT------------------------------
T ss_pred ------------------HHHHhCC-------EEEEEccchhh-hhcCCC------------------------------
Confidence 9999999 99999998543 11 000
Q ss_pred cccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHH
Q psy11047 460 RLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRN 539 (943)
Q Consensus 460 ~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~ 539 (943)
..... ..+. ..+|++++++||+++....+.+ ..++..+..-.. ......+....+. .....+ ...
T Consensus 196 --~~~~~-~~~~--~~~d~~~~s~~K~g~~~~~g~l----~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~--~~~ 260 (359)
T 1svv_A 196 --NDLTL-ADIA--RLTDMFYIGATKAGGMFGEALI----ILNDALKPNARH--LIKQRGALMAKGW--LLGIQF--EVL 260 (359)
T ss_dssp --CCCCH-HHHH--HHCSEEEEECTTTTCSSCEEEE----ECSGGGCTTHHH--HHHHTTCCCTTTH--HHHHHH--HHH
T ss_pred --cchhh-hhhh--hcCCEEEEecccCCCCCceEEE----EEcccHHHHHHH--HHhcCCcccccch--hhHHHH--HHH
Confidence 00000 0000 2469999999999773221111 000111000000 0000000011010 011000 011
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCC
Q psy11047 540 FGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPR 619 (943)
Q Consensus 540 ~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~ 619 (943)
+...++.+..++ ..++++++.+.| +.++
T Consensus 261 l~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L-~~~~ 288 (359)
T 1svv_A 261 MKDNLFFELGAH---------------------------------------------------SNKMAAILKAGL-EACG 288 (359)
T ss_dssp TSTTHHHHHHHH---------------------------------------------------HHHHHHHHHHHH-HHTT
T ss_pred HhhhhHHHHHHH---------------------------------------------------HHHHHHHHHHHh-ccCC
Confidence 111122222222 245667777777 5678
Q ss_pred eEEecCCCccEEEEEecCCChHHHHHHHHHhcc-CcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 620 FEIPAARHLGMVVIRLLGENILTEKLLKRLNSK-GRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 620 ~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~-G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+++..+...+.+.+++. .++.++|.++ |.+.... ...+..++|++++..+++++|+++++.|+++.++
T Consensus 289 ~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 289 IRLAWPSASNQLFPILE------NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp CCBSSCCSSSEECBEEE------HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred eEEccCCccceEEEEcC------HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 88887777777777663 4788888888 8755321 1234678999988889999999999999877543
No 39
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.73 E-value=1e-16 Score=178.39 Aligned_cols=328 Identities=12% Similarity=0.040 Sum_probs=207.4
Q ss_pred EccCCCC-hHHHHHHHHHHHH--hccCc-cc---cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE-cCChH
Q psy11047 197 YFPALNS-YPSLLGDMLSDAI--NCLGF-TW---ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL-QTTAS 268 (943)
Q Consensus 197 ~~~~~~s-~~silgd~L~~al--N~n~~-~~---~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf-TsGGT 268 (943)
|-+++.. ++.++..|..... +.|+. .+ ..++.+.++-.++++.+++++|.+++ ...+| |+|||
T Consensus 9 f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~---------~~v~f~t~~~T 79 (361)
T 3m5u_A 9 FSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD---------YEVLFLQGGAS 79 (361)
T ss_dssp CCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT---------EEEEEESSHHH
T ss_pred ecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC---------ceEEEEcCcHH
Confidence 4444443 4556555554433 22322 11 22566777777899999999999753 25788 99999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCC--cCHHHHHHHHH
Q psy11047 269 ESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLS--LRGDKLIEAIE 346 (943)
Q Consensus 269 eANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~gr--mD~daLe~aI~ 346 (943)
+|+..++... + ++ + .-.+++++..+|.++..+...| .++..|+++..+. ++++. + |+
T Consensus 80 ~a~n~~~~~~----~-------~~---~---~~~~i~~~~~~~~~~~~a~~~G-~~v~~~~~~~~g~~~~~~~~-~--l~ 138 (361)
T 3m5u_A 80 LQFAMIPMNL----A-------LN---G---VCEYANTGVWTKKAIKEAQILG-VNVKTVASSEESNFDHIPRV-E--FS 138 (361)
T ss_dssp HHHHHHHHHH----C-------CS---S---CEEEEECSHHHHHHHHHHHHTT-CCEEEEEECTTTTSCSCCCC-C--CC
T ss_pred HHHHHHHHhc----C-------CC---C---eEEEEeCCHHHHHHHHHHHHcC-CceEEEecccCcCCCcCChh-h--cC
Confidence 9998776632 0 11 0 1235666666675555554556 4889999988774 56655 3 54
Q ss_pred HhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcc
Q psy11047 347 RDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF 426 (943)
Q Consensus 347 ~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~af 426 (943)
++ +.+|+.++..|.+|.+.| .|++ +|+ ++||||+++.. ..
T Consensus 139 ~~------t~lv~~~~~e~~tG~~~~--~i~~------------------------~~~-------~~~vD~~q~~g-~~ 178 (361)
T 3m5u_A 139 DN------ADYAYICSNNTIYGTQYQ--NYPK------------------------TKT-------PLIVDASSDFF-SR 178 (361)
T ss_dssp TT------SSEEEEESEETTTTEECS--SCCC------------------------CSS-------CEEEECGGGTT-SS
T ss_pred CC------CCEEEEeCCCCCcceeCC--cccc------------------------cCC-------EEEEEcccccC-CC
Confidence 43 567888999999999855 2433 488 99999999766 32
Q ss_pred ccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcch-------hhhhc
Q psy11047 427 EIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGA-------LHRTF 499 (943)
Q Consensus 427 eLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~-------L~~af 499 (943)
| .+ ++.+|.+++++|||++.+.-.. +...-
T Consensus 179 --~---------------------------------id--------~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~ 215 (361)
T 3m5u_A 179 --K---------------------------------VD--------FSNIALFYGGVQKNAGISGLSCIFIRKDMLERSK 215 (361)
T ss_dssp --C---------------------------------CC--------CTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHH
T ss_pred --C---------------------------------CC--------cccCCEEEEechhccCCCccEEEEEcHHHHhhhc
Confidence 1 10 2246999999999999322211 11110
Q ss_pred c-cCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc-chhhhhc
Q psy11047 500 N-VEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCL-GTAMIVK 577 (943)
Q Consensus 500 ~-~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~-g~~~i~~ 577 (943)
. ..|.|+ ++....-..+|. .|....|+.|+.+.++.+.+ . |++.|.+
T Consensus 216 ~~~~p~~~---------~~~~~~~~~~~~-------~Tp~v~~i~~l~~al~~l~~---------------~gG~~~i~~ 264 (361)
T 3m5u_A 216 NKQIPSML---------NYLTHAENQSLF-------NTPPTFAIYMFNLEMDWLLN---------------QGGLDKVHE 264 (361)
T ss_dssp TCCCCGGG---------CHHHHHHTTTCS-------SCCCHHHHHHHHHHHHHHHT---------------TTCHHHHHH
T ss_pred CCCCCcee---------ehHHHhhcCCCC-------CCccHHHHHHHHHHHHHHHH---------------ccCHHHHHH
Confidence 0 112221 111000011221 24556677788888887543 3 4555544
Q ss_pred ccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCe-EEecCC---CccEEEEEecCCChHHHHHHHHHhccC
Q psy11047 578 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF-EIPAAR---HLGMVVIRLLGENILTEKLLKRLNSKG 653 (943)
Q Consensus 578 ~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~-eIl~~~---~l~iV~Fr~~g~n~l~~~Ll~~L~~~G 653 (943)
+ ..+|++++.+.|.+++++ +++.++ ..++++|++++...+...+...|.++|
T Consensus 265 ~------------------------~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~g 320 (361)
T 3m5u_A 265 K------------------------NSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAG 320 (361)
T ss_dssp H------------------------HHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTT
T ss_pred H------------------------HHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCC
Confidence 3 578999999999999876 665432 246899999862233457888888887
Q ss_pred cEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 654 RLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 654 ~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.. +.. .....+.+|++++.++|.+||+++++.|+++.++
T Consensus 321 I~-~~~-g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 321 MI-GLK-GHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EE-CCB-CCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CE-Eec-CCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 53 322 2222356999999999999999999999988654
No 40
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.72 E-value=1.9e-17 Score=176.98 Aligned_cols=299 Identities=12% Similarity=0.052 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+...+.+|+++++| ++ ...+||+|||+||..++.+++ .+ .-.|+++..
T Consensus 42 ~~~~~~l~~~la~~~g-~~----------~~v~~~~~gt~a~~~al~~~~----------~~---------gd~vi~~~~ 91 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RD----------VEVFLVPTGTAANALCLSAMT----------PP---------WGNIYCHPA 91 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SC----------CEEEEESCHHHHHHHHHHTSC----------CT---------TEEEEECTT
T ss_pred chHHHHHHHHHHHHhC-CC----------CcEEEeCCccHHHHHHHHHhc----------CC---------CCEEEEcCc
Confidence 3556678889999999 42 247999999999988877542 12 235777888
Q ss_pred CchHHHHH--H-HHC-CccEEEEecCCCCCcCHHHHHH-HHHHhh-ccCCCcEEEEEecCCCcccc---cccHHHhhhhc
Q psy11047 310 AHSSVEKA--G-LIG-LVNMRYIESDDKLSLRGDKLIE-AIERDK-KKHLIPFFIFSGLALPAFLV---VDSYCCLGTAM 380 (943)
Q Consensus 310 aHySv~KA--a-~LG-~~~v~~Vp~D~~grmD~daLe~-aI~~d~-~kG~~P~~VVaTaGTT~tGa---IDpL~eIa~~~ 380 (943)
+|++..++ + .+. +..++.+|.+ ++.+|+++|++ +|++.. ..+..+.+|+.+.. +++|. .+++++|.+
T Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~-~~tG~~~~~~~l~~i~~-- 167 (356)
T 1v72_A 92 SHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQA-TEVGSIYTLDEIEAIGD-- 167 (356)
T ss_dssp SHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHH--
T ss_pred cchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcC-CCCCccCCHHHHHHHHH--
Confidence 99998776 5 452 4578888875 58999999999 886521 12223677777774 46998 677888888
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCc
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGR 460 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~ 460 (943)
+|++||+ |+|+|++|+.+ .+. . .|
T Consensus 168 ------------------~~~~~~~-------~li~D~a~~~~-~~~--~---------------------------~~- 191 (356)
T 1v72_A 168 ------------------VCKSSSL-------GLHMDGSRFAN-ALV--S---------------------------LG- 191 (356)
T ss_dssp ------------------HHHHTTC-------EEEEEETTHHH-HHH--H---------------------------HT-
T ss_pred ------------------HHHHcCC-------eEEEEchhhHh-Hhc--c---------------------------CC-
Confidence 9999999 99999998743 110 0 00
Q ss_pred ccccchhhhhcCC-CCeeEEEEcCCCccCccCc-chhhhhcccCccccccCCCCcccccCccccCCC-CCcchHHHHHHH
Q psy11047 461 LHCVPASLRIQGL-GRAQNFTIVPSSLLRVKNS-GALHRTFNVEPLYLRHENSGLAIDYMHWQIPLS-KRFRALKLWFVI 537 (943)
Q Consensus 461 ~~~p~~r~~l~Gi-e~ADSItiDpHK~L~vr~~-~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~S-RrfrALklW~tL 537 (943)
..+. ..++ ..+|.+++++||+++ +-. ..+. .++..+..-. .... ..+. .......+...+
T Consensus 192 -~~~~----~~~~~~~~d~~~~s~sK~g~-~~G~g~~~----~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~ 254 (356)
T 1v72_A 192 -CSPA----EMTWKAGVDALSFGATKNGV-LAAEAIVL----FNTSLATEMS-----YRRK--RAGHLSSKMRFLSAQID 254 (356)
T ss_dssp -CCTT----TTTGGGTCCEEEECCGGGTC-SSCEEEEE----SSGGGHHHHH-----HHHH--HTTCCCSSTHHHHHHHH
T ss_pred -CCHH----HhhhhhcCCEEEEecccCCC-cCccEEEE----ECHHHHhhHH-----HHhh--ccCchhhhHHHHHHHHH
Confidence 0000 0111 257999999999943 332 1110 0111110000 0000 0000 000001111111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCC
Q psy11047 538 RNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 617 (943)
Q Consensus 538 r~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~ 617 (943)
+.+....+.+++++ ..++++++.+.|.++
T Consensus 255 ~~l~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~~ 283 (356)
T 1v72_A 255 AYLTDDLWLRNARK---------------------------------------------------ANAAAQRLAQGLEGL 283 (356)
T ss_dssp HHTSTTHHHHHHHH---------------------------------------------------HHHHHHHHHHHHTTC
T ss_pred HHHHhhhHHHHHHH---------------------------------------------------HHHHHHHHHHHHhhC
Confidence 11111112222222 245778888899888
Q ss_pred CCeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 618 PRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 618 p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+++++..+...+++.+++. ..+.++|.++|.+ +.+..+. ..++|++++..+++++++++++.|+++.++
T Consensus 284 ~g~~~~~~~~~~~~~~~~~------~~~~~~l~~~gi~-v~~g~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 284 GGVEVLGGTEANILFCRLD------SAMIDALLKAGFG-FYHDRWG-PNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp TTEEEESCCCSSEEEEEEC------HHHHHHHHHTTCB-CBCSSSS-TTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred CCcEEccCCCccEEEEEcC------HHHHHHHHhcCeE-EeccccC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 9999987778888888874 3677788777864 3322232 579999999999999999999999877543
No 41
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.72 E-value=4.1e-16 Score=169.86 Aligned_cols=307 Identities=9% Similarity=-0.021 Sum_probs=197.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
++...++...+.+++++++|.+.+ ...++|+|||+|+..++.+.. .+| -.|+
T Consensus 62 ~~~~~~~~~~~~~~la~~~g~~~~---------~~v~~t~g~t~al~~~~~~~~----------~~g---------d~Vl 113 (393)
T 1vjo_A 62 DPAFLALMDEIQSLLRYVWQTENP---------LTIAVSGTGTAAMEATIANAV----------EPG---------DVVL 113 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCS---------CEEEESSCHHHHHHHHHHHHC----------CTT---------CEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEeCchHHHHHHHHHhcc----------CCC---------CEEE
Confidence 455677888999999999998632 158999999999988887642 122 2466
Q ss_pred ecCCCchH--HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 306 CSDQAHSS--VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 306 ~S~~aHyS--v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++.+|++ +..++...+.+++.++.+.++.+|+++|+++|++. .+.+|+.+...+.+|.+.|+++|.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~----- 183 (393)
T 1vjo_A 114 IGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH-----RPAILALVHAETSTGARQPLEGVGE----- 183 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHH-----
T ss_pred EEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceeccHHHHHH-----
Confidence 77888988 77777544458899999888999999999999863 1557788888899999999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ |+++|++|+.. .. + .
T Consensus 184 ---------------l~~~~~~-------~li~Dea~~~g-~~--~---------------------------------~ 205 (393)
T 1vjo_A 184 ---------------LCREFGT-------LLLVDTVTSLG-GV--P---------------------------------I 205 (393)
T ss_dssp ---------------HHHHHTC-------EEEEECTTTTT-TS--C---------------------------------C
T ss_pred ---------------HHHHcCC-------EEEEECCcccc-Cc--C---------------------------------C
Confidence 9999999 99999999833 21 1 0
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccCccCc-ch------hhhhccc-----CccccccCCCCccccc-CccccCC-CCC-c
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLRVKNS-GA------LHRTFNV-----EPLYLRHENSGLAIDY-MHWQIPL-SKR-F 528 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~------L~~af~~-----~p~YL~~~~~g~~~d~-~~~tie~-SRr-f 528 (943)
+ +.. ..+|.++.++||+++...+ +. +.+.+.. .+.|.... ....+ ....... +-. .
T Consensus 206 ~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~ 276 (393)
T 1vjo_A 206 F-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMN---LLGKYWGSERVYHHTAPIN 276 (393)
T ss_dssp C-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH---HHHHHHSTTCCCCSCCCHH
T ss_pred c-----ccc-cCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcH---hhhhhhccCCCCCCCCCHH
Confidence 0 111 2579999999998872221 11 1111100 01011000 00000 0001111 111 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHH
Q psy11047 529 RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQ 608 (943)
Q Consensus 529 rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~ 608 (943)
....++.+++.+...++.+..++ ..++++
T Consensus 277 ~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~~ 305 (393)
T 1vjo_A 277 LYYALREALRLIAQEGLANCWQR---------------------------------------------------HQKNVE 305 (393)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHH---------------------------------------------------HHHHHH
Confidence 12233344444333334444433 235667
Q ss_pred HHHHHHhCCCCeEEecCCC---ccEEEEEec-CCChHHHHHHHHHhcc-CcEEEeec-ccCCCcEEEEe-ecCCCCHHHH
Q psy11047 609 KFEALVLGDPRFEIPAARH---LGMVVIRLL-GENILTEKLLKRLNSK-GRLHCVPA-SLRIQGLGRAQ-NFTRTTNDDI 681 (943)
Q Consensus 609 ~l~~~L~~~p~~eIl~~~~---l~iV~Fr~~-g~n~l~~~Ll~~L~~~-G~~~~s~t-~~~g~~~lR~v-~~~~tt~edI 681 (943)
++.+.|++. ++++..+.. .++++|+++ +.+ ...+.++|.++ |.+ +.+. ......++|++ ....++++++
T Consensus 306 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~gi~-v~~g~~~~~~~~iRis~~~~~~~~~~i 381 (393)
T 1vjo_A 306 YLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDGVD--GKAVARRLLNEHNIE-VGGGLGELAGKVWRVGLMGFNSRKESV 381 (393)
T ss_dssp HHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTTCC--HHHHHHHHHHHHCEE-CEECCGGGTTTEEEEECCGGGCSHHHH
T ss_pred HHHHHHHHc-CCcccCCccccCCcEEEEEcCCCCC--HHHHHHHHHhhCCEE-EecCccccCCCEEEEeCCccCChHHHH
Confidence 777777766 777765432 478888885 322 46788888887 754 4432 22346799996 5667788899
Q ss_pred HHHHHHHHHHH
Q psy11047 682 TRDWNEIRNTA 692 (943)
Q Consensus 682 d~ll~~I~~~~ 692 (943)
+++++.|+++.
T Consensus 382 ~~~~~~l~~~l 392 (393)
T 1vjo_A 382 DQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988753
No 42
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.72 E-value=2.9e-16 Score=169.57 Aligned_cols=344 Identities=8% Similarity=-0.068 Sum_probs=203.4
Q ss_pred CceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHH
Q psy11047 192 PYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASEST 271 (943)
Q Consensus 192 Prf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeAN 271 (943)
|+.+.+.+++...+..+.+.+..... .+ .+|........++++++++++.... .+....+||+|||+|+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~----~~-~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~v~~~~g~t~al 72 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSL----GH-TSPEFVSIFQRVLKNTRAVFKSAAA------SKSQPFVLAGSGTLGW 72 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCC----CT-TSHHHHHHHHHHHHHHHHHTTCCGG------GTCEEEEEESCTTHHH
T ss_pred ccceeecCCCcCchHHHHHHHhcccc----cc-CCHHHHHHHHHHHHHHHHHhCCCCC------CCCceEEEcCchHHHH
Confidence 45566666655443333333322221 12 2666666666788999999987521 0112689999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe-cCCCchHHHHHHHHCCccEEEEec-CCCCCcCHHHHHHHHHHhh
Q psy11047 272 LICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC-SDQAHSSVEKAGLIGLVNMRYIES-DDKLSLRGDKLIEAIERDK 349 (943)
Q Consensus 272 L~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~-S~~aHySv~KAa~LG~~~v~~Vp~-D~~grmD~daLe~aI~~d~ 349 (943)
..++.+.... ..+| +-+++. +...|.++.+++...+.+++.+++ +.++.+|+++|+++|++.
T Consensus 73 ~~~~~~~~~~-------~~~g--------d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~- 136 (385)
T 2bkw_A 73 DIFASNFILS-------KAPN--------KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQN- 136 (385)
T ss_dssp HHHHHHHSCT-------TCSC--------CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHS-
T ss_pred HHHHHHHhcc-------CCCC--------CeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcC-
Confidence 8887764200 0122 223343 334555555555443448899999 889999999999999862
Q ss_pred ccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHc--CCCCCccchhhhHHhhhcCCCccc
Q psy11047 350 KKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSY--FPKFQSVRLAQKFEALVLGDPRFE 427 (943)
Q Consensus 350 ~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~--Gl~~~~l~lwLHVDAA~GG~~afe 427 (943)
.+.+|+.+..++.+|.+.|+++|.+ +|++| |+ |+|+|++++.. ..
T Consensus 137 ----~~~~v~~~~~~nptG~~~~l~~i~~--------------------~~~~~~~~~-------~li~D~a~~~~-~~- 183 (385)
T 2bkw_A 137 ----SYGAVTVTHVDTSTAVLSDLKAISQ--------------------AIKQTSPET-------FFVVDAVCSIG-CE- 183 (385)
T ss_dssp ----CCSEEEEESEETTTTEECCHHHHHH--------------------HHHHHCTTS-------EEEEECTTTTT-TS-
T ss_pred ----CCCEEEEEccCCCcCeEcCHHHHHH--------------------HHHhhCCCC-------EEEEECccccC-Cc-
Confidence 1567888889999999999999999 99999 99 99999999754 21
Q ss_pred cccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC-ccCcchh------hh-hc
Q psy11047 428 IPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGAL------HR-TF 499 (943)
Q Consensus 428 Lp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L------~~-af 499 (943)
+ .+ +... .+|.+++++|||++ ...-+.+ .. .+
T Consensus 184 -~---------------------------------~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l 223 (385)
T 2bkw_A 184 -E---------------------------------FE-----FDEW-GVDFALTASQKAIGAPAGLSISLCSSRFMDYAL 223 (385)
T ss_dssp -C---------------------------------CC-----TTTT-TCSEEEEESSSTTCCCSCEEEEEECHHHHHHHT
T ss_pred -c---------------------------------cc-----cccc-CceEEEecCccccccCCcceEEEEcHHHHHHHH
Confidence 0 11 1111 47999999999776 2111111 01 11
Q ss_pred cc---CccccccCCCCcccc-c-Ccccc-----CCCCCc-chHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Q psy11047 500 NV---EPLYLRHENSGLAID-Y-MHWQI-----PLSKRF-RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYC 568 (943)
Q Consensus 500 ~~---~p~YL~~~~~g~~~d-~-~~~ti-----e~SRrf-rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~ 568 (943)
.. .+.. .......... . ..+.. .++-.. ....+..+++.+...|+.+.+++
T Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~----------------- 285 (385)
T 2bkw_A 224 NDSKNGHVH-GYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDL----------------- 285 (385)
T ss_dssp CHHHHCCCS-CSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH-----------------
T ss_pred hhccCCCCC-ceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHH-----------------
Confidence 00 0000 0000000000 0 00000 011111 11122233333322233333333
Q ss_pred ccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHH-hCCCCeEEecC-----CCccEEEEEecCCChHH
Q psy11047 569 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV-LGDPRFEIPAA-----RHLGMVVIRLLGENILT 642 (943)
Q Consensus 569 ~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L-~~~p~~eIl~~-----~~l~iV~Fr~~g~n~l~ 642 (943)
..++++++.+.| ++. ++++..+ ...+++.|++.+ .
T Consensus 286 ----------------------------------~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~----~ 326 (385)
T 2bkw_A 286 ----------------------------------HREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD----P 326 (385)
T ss_dssp ----------------------------------HHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC----H
T ss_pred ----------------------------------HHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC----H
Confidence 346788888888 877 7888752 247889999864 5
Q ss_pred HHHHHHHhccCcEEEeeccc--CCCcEEEEe-ecC---CCCHHHHHHHHHHHHHHHH
Q psy11047 643 EKLLKRLNSKGRLHCVPASL--RIQGLGRAQ-NFT---RTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 643 ~~Ll~~L~~~G~~~~s~t~~--~g~~~lR~v-~~~---~tt~edId~ll~~I~~~~~ 693 (943)
.++.++|.++|. .+.+... .+..++|++ +.+ .++++|++++++.|+++.+
T Consensus 327 ~~~~~~l~~~gi-~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 327 PDVIAFLKSHGV-VIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp HHHHHHHHHTTE-ECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCe-EEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 678888887774 4443221 235789997 552 5799999999999987643
No 43
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.71 E-value=1e-15 Score=165.43 Aligned_cols=308 Identities=11% Similarity=0.059 Sum_probs=189.6
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEE-EcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGV-LQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gv-fTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
+|....+...+.+++++++|.+.+ ...+ +|+|||+|+..++.+.. .+| +- |
T Consensus 47 ~~~~~~~~~~~~~~la~~~g~~~~---------~~~i~~~~ggt~al~~~~~~~~----------~~g--------d~-v 98 (376)
T 3f0h_A 47 TTEFSSTMLENEKFMLEYAKAPEG---------SKAVFMTCSSTGSMEAVVMNCF----------TKK--------DK-V 98 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT---------CEEEEESSCHHHHHHHHHHHHC----------CTT--------CC-E
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------ceEEEEcCChhHHHHHHHHhcc----------CCC--------Ce-E
Confidence 566667778899999999999753 1344 58999999988876532 122 22 4
Q ss_pred EecCCCchHHH--HHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 305 YCSDQAHSSVE--KAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 305 ~~S~~aHySv~--KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
+++...+++.. ..+...+..++.++++.++.+|+++|+++++.+ +.+|+.+...+.+|.+.|+++|++
T Consensus 99 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i~~---- 168 (376)
T 3f0h_A 99 LVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQN------FTGLLVNVDETSTAVLYDTMMIGE---- 168 (376)
T ss_dssp EEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSC------CCEEEEESEETTTTEECCHHHHHH----
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccC------ceEEEEecccCCcceecCHHHHHH----
Confidence 44444455422 233344558899999888999999999876432 667888888889999999999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+|++||+ |+++|++++.+ .. .
T Consensus 169 ----------------l~~~~~~-------~li~D~~~~~~-~~-----------------------------------~ 189 (376)
T 3f0h_A 169 ----------------FCKKNNM-------FFVCDCVSAFL-AD-----------------------------------P 189 (376)
T ss_dssp ----------------HHHHTTC-------EEEEECTTTTT-TS-----------------------------------C
T ss_pred ----------------HHHHcCC-------EEEEEcCcccc-Cc-----------------------------------c
Confidence 9999999 99999998765 21 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccC-ccCcch------hhhhccc--Ccc-ccccCCCCcccccCccccCCCCCcch-H
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGA------LHRTFNV--EPL-YLRHENSGLAIDYMHWQIPLSKRFRA-L 531 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~------L~~af~~--~p~-YL~~~~~g~~~d~~~~tie~SRrfrA-L 531 (943)
. ..... .+|.+++++||+++ ...-.. +.+.+.. .+. |+..... .......+...+-...+ .
T Consensus 190 ~-~~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 261 (376)
T 3f0h_A 190 F-NMNEC-----GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDA--LKNQERGQTPFTPAVGILL 261 (376)
T ss_dssp C-CHHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHH--HHHHTTTCCSSCCCHHHHH
T ss_pred c-ccccc-----CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHH--HhhcccCCCCCCCcHHHHH
Confidence 0 11111 36999999999998 222111 1111110 000 1100000 00000000001101101 2
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHH
Q psy11047 532 KLWFVIRNFGIK-GLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKF 610 (943)
Q Consensus 532 klW~tLr~~G~~-Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l 610 (943)
.+..++..+... ++.+..++ ..++++++
T Consensus 262 a~~~al~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l 290 (376)
T 3f0h_A 262 QINERLKEIKKHGGADAEVAR---------------------------------------------------IASQAADF 290 (376)
T ss_dssp HHHHHHHHHHHTTHHHHHHHH---------------------------------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHH---------------------------------------------------HHHHHHHH
Confidence 233334433333 34433333 34677888
Q ss_pred HHHHhCCCCeEEecCC-CccEEEEEecCCChHHHHHHHHHhcc-CcEEEeec-ccCCCcEEEEeecCCCCHHHHHHHHHH
Q psy11047 611 EALVLGDPRFEIPAAR-HLGMVVIRLLGENILTEKLLKRLNSK-GRLHCVPA-SLRIQGLGRAQNFTRTTNDDITRDWNE 687 (943)
Q Consensus 611 ~~~L~~~p~~eIl~~~-~l~iV~Fr~~g~n~l~~~Ll~~L~~~-G~~~~s~t-~~~g~~~lR~v~~~~tt~edId~ll~~ 687 (943)
.+.|++. ++++..+. ...++.|...+.+ ..++.++|.++ |. .+.+. ...+..++|++++..+|+++++++++.
T Consensus 291 ~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~~gi-~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~ 366 (376)
T 3f0h_A 291 RAKIKDL-PFELVSESPANGVTSVHPTTAN--AYDIFLKLKDEYGI-WICPNGGEMKDTIFRVGHIGALTHEDNTTLVNA 366 (376)
T ss_dssp HHHTTTS-SEEECCSSBBTTEEEEEESSSC--HHHHHHHHHHHSSE-ECEECCGGGTTTCEEEECCSSCCHHHHHHHHHH
T ss_pred HHHHHHc-CCccCccccCceEEEEeCCCCC--HHHHHHHHHHhCCE-EEecCccccCCCEEEEecCCCCCHHHHHHHHHH
Confidence 8888876 57776544 3445566654433 57888888888 64 44432 123457899998888999999999999
Q ss_pred HHHHHH
Q psy11047 688 IRNTAT 693 (943)
Q Consensus 688 I~~~~~ 693 (943)
|+++.+
T Consensus 367 l~~~l~ 372 (376)
T 3f0h_A 367 FKDLQK 372 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 44
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.71 E-value=8.3e-15 Score=163.44 Aligned_cols=300 Identities=12% Similarity=-0.010 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+++++++|.+ ..+++++||+||..++.+.. .+| -.|+++...
T Consensus 109 ~~~~~l~~~la~~~g~~------------~~i~~~sGs~a~~~al~~l~----------~~g---------d~vl~~~~~ 157 (427)
T 2w8t_A 109 HDHMEVEQALRDFYGTT------------GAIVFSTGYMANLGIISTLA----------GKG---------EYVILDADS 157 (427)
T ss_dssp HHHHHHHHHHHHHHTCS------------EEEEESCHHHHHHHHHHHHS----------CTT---------CEEEEETTC
T ss_pred HHHHHHHHHHHHHhCCC------------ceEEecCcHHHHHHHHHHhc----------CCC---------CEEEECCcc
Confidence 45556667888888875 25788889999988765421 122 357788999
Q ss_pred chHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 311 HSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 311 HySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
|.++..++.+.+.+++.++. +|+++|++.|+.... + .+.+|+.+...+.+|.+.|+++|.+
T Consensus 158 h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~-~-~~~~v~~~~~~n~tG~~~~l~~l~~------------ 218 (427)
T 2w8t_A 158 HASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPK-E-PAKLVVLEGVYSMLGDIAPLKEMVA------------ 218 (427)
T ss_dssp CHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCS-S-SCEEEEEESEETTTTEECCHHHHHH------------
T ss_pred cHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccC-C-CCeEEEEcCCCCCCCCccCHHHHHH------------
Confidence 99999988655556777763 689999999986321 1 3667777777788999999999999
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhh
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRI 470 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l 470 (943)
+|++||+ |+++|.+|+++ .+. . +|. .... .
T Consensus 219 --------l~~~~g~-------~li~Dea~~~~-~~~--~---------------------------~g~----~~~~-~ 248 (427)
T 2w8t_A 219 --------VAKKHGA-------MVLVDEAHSMG-FFG--P---------------------------NGR----GVYE-A 248 (427)
T ss_dssp --------HHHHTTC-------EEEEECTTTTT-TSS--T---------------------------TSC----CHHH-H
T ss_pred --------HHHHcCC-------EEEEECCcccc-ccC--C---------------------------CCC----chHh-h
Confidence 9999999 99999999876 320 0 000 0000 1
Q ss_pred cCC-CCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHHHHHHHHHHHHHHH
Q psy11047 471 QGL-GRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWFVIRNFGIKGLQKH 548 (943)
Q Consensus 471 ~Gi-e~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~tLr~~G~~Gl~~~ 548 (943)
.++ +.+|.+..++||+++.+. +.+... ..-..++.... ..|...++-.. ....+..+++.+. .+.+.
T Consensus 249 ~~~~~~~di~~~s~sK~~g~~g-G~v~~~-~~l~~~l~~~~-------~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~ 317 (427)
T 2w8t_A 249 QGLEGQIDFVVGTFSKSVGTVG-GFVVSN-HPKFEAVRLAC-------RPYIFTASLPPSVVATATTSIRKLM--TAHEK 317 (427)
T ss_dssp TTCTTCCSEEEEESSSTTCSCC-EEEEEC-CTTGGGGGGTC-------HHHHSSCCCCHHHHHHHHHHHHHHT--SCHHH
T ss_pred cCCCcCCcEEEecchhhhccCC-CEEEeC-HHHHHHHHHhc-------ccccccCCCCHHHHHHHHHHHHHHh--cCHHH
Confidence 122 357999999999998433 111000 00001111000 00111111111 1111111122110 00111
Q ss_pred HHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC-C
Q psy11047 549 IREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR-H 627 (943)
Q Consensus 549 I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~-~ 627 (943)
.++ ..++++++.+.|++. ++++..++ .
T Consensus 318 ~~~---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~~~~~~ 345 (427)
T 2w8t_A 318 RER---------------------------------------------------LWSNARALHGGLKAM-GFRLGTETCD 345 (427)
T ss_dssp HHH---------------------------------------------------HHHHHHHHHHHHHHH-TCEESCSSCC
T ss_pred HHH---------------------------------------------------HHHHHHHHHHHHHHc-CCcccCCCCC
Confidence 111 245666777777666 78887555 7
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
.+++.|.+.+ ......+.++|.++|. ++.+... .+..++|++++..++++||+++++.|+++.+++
T Consensus 346 ~~~~~~~~~~-~~~~~~l~~~L~~~Gi-~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 346 SAIVAVMLED-QEQAAMMWQALLDGGL-YVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp SSEEEEEESS-HHHHHHHHHHHHHTTE-ECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECC-HHHHHHHHHHHHHCCe-EEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7899998853 2345788888888875 4443221 235689999999999999999999998876554
No 45
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.70 E-value=1.8e-15 Score=163.74 Aligned_cols=301 Identities=9% Similarity=0.009 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
......+.+.+++++|.+.+ ..++|+|||+|+..++.+.+ + .+| -.|+++..
T Consensus 58 ~~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~a~~~~~~~~~---~------~~g---------d~vl~~~~ 109 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN----------TITITDNVTTGCDIVLWGLD---W------HQG---------DEILLTDC 109 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG----------GEEEESSHHHHHHHHHHHSC---C------CTT---------CEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCHH----------HEEEeCChHHHHHHHHhCCC---C------CCC---------CEEEEecC
Confidence 45566788899999998653 58999999999988876542 0 122 24677888
Q ss_pred CchHHHHH----HHHCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 310 AHSSVEKA----GLIGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 310 aHySv~KA----a~LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+|.+...+ +...+.+++.++.+ +++.+|+++|+++|+.+ +.+|+.+...+.+|.+.|+++|.+
T Consensus 110 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~----- 178 (390)
T 1elu_A 110 EHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMA----- 178 (390)
T ss_dssp CCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHH-----
T ss_pred cccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHH-----
Confidence 99986654 33323478888887 67899999999888643 678888889999999999999999
Q ss_pred ccccccccccCchHHHHH----HcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccC
Q psy11047 384 GLGFYKMKLQTNFPNFIL----SYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKG 459 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar----~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G 459 (943)
+|+ +||+ ++++|++|+.+ .. +
T Consensus 179 ---------------l~~~~~~~~~~-------~li~Dea~~~g-~~--~------------------------------ 203 (390)
T 1elu_A 179 ---------------VCRRHQGNYPV-------RVLVDGAQSAG-SL--P------------------------------ 203 (390)
T ss_dssp ---------------HHHHCCSSSCC-------EEEEECTTTBT-TB--C------------------------------
T ss_pred ---------------HHhhhhhhcCc-------EEEEEcccccC-Cc--C------------------------------
Confidence 999 9999 99999999744 21 0
Q ss_pred cccccchhhhhcCCCCeeEEEEcCCCccCccCc-ch------hhhhcccCccccccCCCCcccccCcc-------cc-CC
Q psy11047 460 RLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNS-GA------LHRTFNVEPLYLRHENSGLAIDYMHW-------QI-PL 524 (943)
Q Consensus 460 ~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~------L~~af~~~p~YL~~~~~g~~~d~~~~-------ti-e~ 524 (943)
.. +.. ..+|.++.++|||++-..+ +. +.+.+ .+.+..........+...| .+ .+
T Consensus 204 ---~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (390)
T 1elu_A 204 ---LD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEI--NPTYVGWRSITYGAKGEPTGWAEGGKRFEVA 272 (390)
T ss_dssp ---CC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTTTGGGC--CCCSCCTTTEEECTTSCEEEECSGGGGGCCS
T ss_pred ---CC-----hhh-cCCCEEEccccccccCCCceEEEEECHHhHhhc--CCccccCCcccccccCcccccccchHhhCCC
Confidence 00 111 2469999999997661111 11 11111 1100000000000000000 01 11
Q ss_pred CCCc-chHHHHHHHHHHHHHH-HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHH
Q psy11047 525 SKRF-RALKLWFVIRNFGIKG-LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQ 602 (943)
Q Consensus 525 SRrf-rALklW~tLr~~G~~G-l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~ 602 (943)
+-.. ....++.++..+...+ +.+..++
T Consensus 273 ~~~~~~~~a~~~al~~l~~~~~~~~~~~~--------------------------------------------------- 301 (390)
T 1elu_A 273 TSAYPQYAGLLAALQLHQRQGTAEERYQA--------------------------------------------------- 301 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCHHHHHHH---------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHH---------------------------------------------------
Confidence 1111 1122333344333333 3333333
Q ss_pred HHHHHHHHHHHHhCCCCeEEecC--CCccEEEEEec-CCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHH
Q psy11047 603 SVRLAQKFEALVLGDPRFEIPAA--RHLGMVVIRLL-GENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTND 679 (943)
Q Consensus 603 ~~~LA~~l~~~L~~~p~~eIl~~--~~l~iV~Fr~~-g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~e 679 (943)
..++++++.+.|++.|++++..+ ...++++|++. +.+ ..++.++|.++|. ++.+.. +..++|++++..++++
T Consensus 302 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi-~v~~~~--~~~~iRis~~~~~~~~ 376 (390)
T 1elu_A 302 ICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLG--HRAIVQKLEEQRI-YLRTIA--DPDCIRACCHYITDEE 376 (390)
T ss_dssp HHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSC--HHHHHHHHHHTTE-ECEEET--TTTEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCCC--HHHHHHHHHHCCE-EEEecC--CCCeEEEecccCCCHH
Confidence 24567788888888889998863 47889999885 322 4678888887775 444432 4578999988999999
Q ss_pred HHHHHHHHHHHH
Q psy11047 680 DITRDWNEIRNT 691 (943)
Q Consensus 680 dId~ll~~I~~~ 691 (943)
+++++++.|+++
T Consensus 377 ~i~~~~~~l~~~ 388 (390)
T 1elu_A 377 EINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhh
Confidence 999999988754
No 46
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.70 E-value=1.2e-15 Score=162.97 Aligned_cols=306 Identities=12% Similarity=0.070 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+++++++|.+... ...++|+|||+|+..++.+.+ .+| +-+++++...
T Consensus 37 ~~~~~l~~~la~~~g~~~~~--------~~v~~~~g~t~a~~~~~~~~~----------~~g--------d~vi~~~~~~ 90 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY--------TSVLLQGSGSYAVEAVLGSAL----------GPQ--------DKVLIVSNGA 90 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE--------EEEEEESCHHHHHHHHHHHSC----------CTT--------CCEEEEESSH
T ss_pred HHHHHHHHHHHHHhCCCCcC--------cEEEEecChHHHHHHHHHHhc----------CCC--------CeEEEEeCCC
Confidence 44456778889999943210 258999999999988877642 122 3356677788
Q ss_pred chH-HHHHHH-HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccc
Q psy11047 311 HSS-VEKAGL-IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFY 388 (943)
Q Consensus 311 HyS-v~KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~ 388 (943)
|.+ +..++. .|. +++.++++.++.+|+++|+++|+++. .+.+|+.+...+.+|.+.|+++|.+
T Consensus 91 ~~~~~~~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~---------- 155 (366)
T 1m32_A 91 YGARMVEMAGLMGI-AHHAYDCGEVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGA---------- 155 (366)
T ss_dssp HHHHHHHHHHHHTC-CEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHH----------
T ss_pred ccHHHHHHHHHhCC-ceEEEeCCCCCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHH----------
Confidence 877 445554 454 78889998889999999999998641 1556777888888999999999999
Q ss_pred cccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhh
Q psy11047 389 KMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL 468 (943)
Q Consensus 389 ~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~ 468 (943)
+|++||+ |+++|++++.. .. + .+
T Consensus 156 ----------l~~~~~~-------~li~Dea~~~~-~~--~---------------------------------~~---- 178 (366)
T 1m32_A 156 ----------LAHRYGK-------TYIVDAMSSFG-GI--P---------------------------------MD---- 178 (366)
T ss_dssp ----------HHHHHTC-------EEEEECTTTTT-TS--C---------------------------------CC----
T ss_pred ----------HHHHcCC-------EEEEECCcccc-Cc--C---------------------------------cc----
Confidence 9999999 99999999754 21 0 00
Q ss_pred hhcCCCCeeEEEEcCCCccCccCc-chhh--hhcccCccccccCCCCcccccC-cc----ccCCCCCc--chH---HHHH
Q psy11047 469 RIQGLGRAQNFTIVPSSLLRVKNS-GALH--RTFNVEPLYLRHENSGLAIDYM-HW----QIPLSKRF--RAL---KLWF 535 (943)
Q Consensus 469 ~l~Gie~ADSItiDpHK~L~vr~~-~~L~--~af~~~p~YL~~~~~g~~~d~~-~~----tie~SRrf--rAL---klW~ 535 (943)
+.. ..+|.++.++|||++...+ +.+. ..+. ..+.....+...+.. .+ +-.+.+++ ..+ .+..
T Consensus 179 -~~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 253 (366)
T 1m32_A 179 -IAA-LHIDYLISSANKCIQGVPGFAFVIAREQKL---AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQ 253 (366)
T ss_dssp -TTT-TTCSEEEEESSSTTCCCSSEEEEEEEHHHH---TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHH
T ss_pred -ccc-cCccEEEecCcccccCCCceEEEEECHHHH---HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHH
Confidence 111 1469999999998752111 1110 0000 001100000000000 00 00012221 111 2333
Q ss_pred HHHHHHHHH-HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHH
Q psy11047 536 VIRNFGIKG-LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV 614 (943)
Q Consensus 536 tLr~~G~~G-l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L 614 (943)
+++.+...| +.+..++ ..++++++.+.|
T Consensus 254 al~~~~~~g~~~~~~~~---------------------------------------------------~~~~~~~l~~~L 282 (366)
T 1m32_A 254 ALKELAKEGGVAARHQR---------------------------------------------------YQQNQRSLVAGM 282 (366)
T ss_dssp HHHHHHHHTHHHHHHHH---------------------------------------------------HHHHHHHHHHHH
T ss_pred HHHHHHHccCHhHHHHH---------------------------------------------------HHHHHHHHHHHH
Confidence 344433333 4443333 245677777777
Q ss_pred hCCCCeEEecC--CCcc-EEEEEecCC-ChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHH
Q psy11047 615 LGDPRFEIPAA--RHLG-MVVIRLLGE-NILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRN 690 (943)
Q Consensus 615 ~~~p~~eIl~~--~~l~-iV~Fr~~g~-n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~ 690 (943)
++. ++++..+ +..+ ++.|++++. +....++.+.|.++|. ++.+....+..++|++++..++++||+++++.|++
T Consensus 283 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 283 RAL-GFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGF-VIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp HHT-TCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTE-ECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHC-CCeeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCE-EEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 776 7777654 2345 888888631 1125678888888874 55543333567999999889999999999999987
Q ss_pred HH
Q psy11047 691 TA 692 (943)
Q Consensus 691 ~~ 692 (943)
+.
T Consensus 361 ~~ 362 (366)
T 1m32_A 361 AM 362 (366)
T ss_dssp HC
T ss_pred HH
Confidence 64
No 47
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.70 E-value=1.5e-15 Score=163.87 Aligned_cols=299 Identities=11% Similarity=0.025 Sum_probs=186.4
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+.+++++|.+ ..++|+|||+|+..++.+.+.+ ..+| -.|+++..+|++.
T Consensus 36 ~l~~~la~~~~~~------------~v~~~~ggt~al~~~~~~~~~~-------~~~g---------d~Vl~~~~~~~~~ 87 (375)
T 2fnu_A 36 LFEEALCEFLGVK------------HALVFNSATSALLTLYRNFSEF-------SADR---------NEIITTPISFVAT 87 (375)
T ss_dssp HHHHHHHHHHTCS------------EEEEESCHHHHHHHHHHHSSCC-------CTTS---------CEEEECSSSCTHH
T ss_pred HHHHHHHHHhCCC------------eEEEeCCHHHHHHHHHHHhccc-------CCCC---------CEEEECCCccHhH
Confidence 4556778888875 3799999999998888764210 0122 3578899999999
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccC
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQT 394 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~R 394 (943)
..++...+.+++.++++.++.+|+++|+++|+++ +.+|+.+.. +|.+.|+++|.+
T Consensus 88 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~---------------- 142 (375)
T 2fnu_A 88 ANMLLESGYTPVFAGIKNDGNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQK---------------- 142 (375)
T ss_dssp HHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHH----------------
T ss_pred HHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHH----------------
Confidence 9988654458889999888899999999888643 455555544 899999999999
Q ss_pred chHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCC
Q psy11047 395 NFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLG 474 (943)
Q Consensus 395 rfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie 474 (943)
+|++||+ |+++|++++.+ .+ + .. ..+....
T Consensus 143 ----l~~~~~~-------~li~D~a~~~~-~~--~---------------------------------~~---~~~~~~~ 172 (375)
T 2fnu_A 143 ----LCKKHSL-------SFLSDSSHALG-SE--Y---------------------------------QN---KKVGGFA 172 (375)
T ss_dssp ----HHHHHTC-------EEEEECTTCTT-CE--E---------------------------------TT---EETTSSS
T ss_pred ----HHHHcCC-------EEEEECccccC-Ce--E---------------------------------CC---eeccccC
Confidence 9999999 99999999765 21 0 00 0011122
Q ss_pred CeeEEEEcCCCccCc--------cCcchhhhhcccCccccccCCCCcccccCccc-cCCCCCcchHHHHHHHHHHHHHHH
Q psy11047 475 RAQNFTIVPSSLLRV--------KNSGALHRTFNVEPLYLRHENSGLAIDYMHWQ-IPLSKRFRALKLWFVIRNFGIKGL 545 (943)
Q Consensus 475 ~ADSItiDpHK~L~v--------r~~~~L~~af~~~p~YL~~~~~g~~~d~~~~t-ie~SRrfrALklW~tLr~~G~~Gl 545 (943)
.++..++++||+++. +++. +.+.+. .+..+... ......+. ...+.++....+...+.....+++
T Consensus 173 ~i~~~s~s~~K~~~~g~g~~~~~~~~~-~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 246 (375)
T 2fnu_A 173 LASVFSFHAIKPITTAEGGAVVTNDSE-LHEKMK---LFRSHGML--KKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA 246 (375)
T ss_dssp SEEEEECCTTSSSCCSSCEEEEESCHH-HHHHHH---HHTBTTEE--ESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH
T ss_pred CeEEEeCCCCCCccccCceEEEeCCHH-HHHHHH---HHHhcCCc--cccccccccccccccCCCCHHHHHHHHHHHHHH
Confidence 578899999999973 1121 111110 01110000 00000000 011111122222222222233444
Q ss_pred HHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecC
Q psy11047 546 QKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAA 625 (943)
Q Consensus 546 ~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~ 625 (943)
.+.+++ ..++++++.+.|++.|++++..+
T Consensus 247 ~~~~~~---------------------------------------------------~~~~~~~l~~~L~~~~~~~~~~~ 275 (375)
T 2fnu_A 247 PFLMQK---------------------------------------------------REEAALTYDRIFKDNPYFTPLHP 275 (375)
T ss_dssp HHHHHH---------------------------------------------------HHHHHHHHHHHHTTCSSEEESGG
T ss_pred HHHHHH---------------------------------------------------HHHHHHHHHHHhhcCCCccccCC
Confidence 444444 35678889999999999998764
Q ss_pred C-----CccEEEEEecCCCh-HHHHHHHHHhccCcEEEe----ecc----cC--------------CCcEEEEeecCCCC
Q psy11047 626 R-----HLGMVVIRLLGENI-LTEKLLKRLNSKGRLHCV----PAS----LR--------------IQGLGRAQNFTRTT 677 (943)
Q Consensus 626 ~-----~l~iV~Fr~~g~n~-l~~~Ll~~L~~~G~~~~s----~t~----~~--------------g~~~lR~v~~~~tt 677 (943)
+ ...++.+++++... ....+.++|.++|.. +. +.. .. ...++|+++++.+|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~-v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t 354 (375)
T 2fnu_A 276 LLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGIL-AQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLN 354 (375)
T ss_dssp GCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEE-CBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCC
T ss_pred CCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCC-ccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCC
Confidence 2 22344566653211 356788888888753 33 111 00 12689999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11047 678 NDDITRDWNEIRNTATE 694 (943)
Q Consensus 678 ~edId~ll~~I~~~~~~ 694 (943)
++||+++++.|+++.++
T Consensus 355 ~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 355 LESVQNIAHSVLKTFES 371 (375)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987654
No 48
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.70 E-value=1.3e-15 Score=165.85 Aligned_cols=312 Identities=10% Similarity=-0.062 Sum_probs=191.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
+|.......++.+++++++|.+.+ ...++|+|||+|+..++.+.. .+| -.|+
T Consensus 46 ~~~~~~~~~~l~~~la~~~~~~~~---------~~v~~~~g~t~al~~~~~~~~----------~~g---------d~vl 97 (396)
T 2ch1_A 46 HAELFRTMDEVKDGLRYIFQTENR---------ATMCVSGSAHAGMEAMLSNLL----------EEG---------DRVL 97 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCS---------CEEEESSCHHHHHHHHHHHHC----------CTT---------CEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCCC---------cEEEECCcHHHHHHHHHHHhc----------CCC---------CeEE
Confidence 566566677899999999998642 147899999999988876531 122 2366
Q ss_pred ecCCCchHHH--HHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 306 CSDQAHSSVE--KAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 306 ~S~~aHySv~--KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++.+|++.. +++...+..++.++++.++.+|+++|+++|++. .+.+|+.+...+.+|.+.|+++|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~----- 167 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQPLEGVGQ----- 167 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHH-----
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecCHHHHHH-----
Confidence 7778898864 344444458899999888999999999999863 1557777888899999999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ |+++|++|+.. .. + .
T Consensus 168 ---------------l~~~~~~-------~li~Dea~~~g-~~--~---------------------------------~ 189 (396)
T 2ch1_A 168 ---------------ICHQHDC-------LLIVDAVASLC-GV--P---------------------------------F 189 (396)
T ss_dssp ---------------HHHHTTC-------EEEEECTTTBT-TB--C---------------------------------C
T ss_pred ---------------HHHHcCC-------EEEEEcccccc-CC--c---------------------------------c
Confidence 9999999 99999998743 21 0 0
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccCc-cCcc------hhhhhcccC----ccccccCCCCcccccC----ccccCCCCCc
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLRV-KNSG------ALHRTFNVE----PLYLRHENSGLAIDYM----HWQIPLSKRF 528 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~v-r~~~------~L~~af~~~----p~YL~~~~~g~~~d~~----~~tie~SRrf 528 (943)
+ +... .+|.++.++||+++. ..-. .+...+... ..|+... .+...-+. .....++-..
T Consensus 190 ~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 262 (396)
T 2ch1_A 190 Y-----MDKW-EIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDL-LLLGNYWGCYDEPKRYHHTVAS 262 (396)
T ss_dssp C-----TTTT-TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCH-HHHHHHTTCSSSCCCCCCCCCH
T ss_pred c-----hhhc-CcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEech-HHHHHhhhhhcccCCCCCCCcH
Confidence 0 1111 369999999998761 1111 111111100 0111100 00000000 0000111111
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 -RALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 -rALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
....+..+++.+...++.+.+++ ..+++
T Consensus 263 ~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~ 291 (396)
T 2ch1_A 263 NLIFALREALAQIAEEGLENQIKR---------------------------------------------------RIECA 291 (396)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHH---------------------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHH---------------------------------------------------HHHHH
Confidence 11222333443333344444433 23456
Q ss_pred HHHHHHHhCCCCeEEecCCC----ccEEEEEec-CCChHHHHHHHHHhcc-CcEEEeec-ccCCCcEEEEee-cCCCCHH
Q psy11047 608 QKFEALVLGDPRFEIPAARH----LGMVVIRLL-GENILTEKLLKRLNSK-GRLHCVPA-SLRIQGLGRAQN-FTRTTND 679 (943)
Q Consensus 608 ~~l~~~L~~~p~~eIl~~~~----l~iV~Fr~~-g~n~l~~~Ll~~L~~~-G~~~~s~t-~~~g~~~lR~v~-~~~tt~e 679 (943)
+++.+.|.+. ++++..+.. .+++.|+++ +.+ ..++.++|.++ |.. +.+. ......++|+++ ++.++++
T Consensus 292 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~e 367 (396)
T 2ch1_A 292 QILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGVD--WWKVSQYAMNNFSLE-VQGGLGPTFGKAWRVGIMGECSTVQ 367 (396)
T ss_dssp HHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTCC--HHHHHHHHHHHHCBC-CBCCCGGGTTTEEEEECCGGGCSHH
T ss_pred HHHHHHHHHC-CCeeccCCccccCCceEEEEcCCCCC--HHHHHHHHHHhCCEE-EecCccccCCCEEEEECCCCcCCHH
Confidence 6677777666 677765432 247888885 333 46788888765 753 3322 122457899977 6678999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11047 680 DITRDWNEIRNTATEI 695 (943)
Q Consensus 680 dId~ll~~I~~~~~~l 695 (943)
|++++++.|+++.+++
T Consensus 368 ~i~~~~~~l~~~l~~~ 383 (396)
T 2ch1_A 368 KIQFYLYGFKESLKAT 383 (396)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998876543
No 49
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.69 E-value=1.9e-16 Score=177.37 Aligned_cols=326 Identities=13% Similarity=0.023 Sum_probs=204.4
Q ss_pred CChHHHHHHHHHHHHh--ccCc-c---ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE-cCChHHHHHHH
Q psy11047 202 NSYPSLLGDMLSDAIN--CLGF-T---WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL-QTTASESTLIC 274 (943)
Q Consensus 202 ~s~~silgd~L~~alN--~n~~-~---~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf-TsGGTeANL~A 274 (943)
+-++.++..|.....| .|+. . ...++.+.++-.++++.+++++|.+++ ...+| |+|||+|+..+
T Consensus 23 ~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~---------~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 23 MLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN---------YKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT---------EEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC---------CeEEEEcCchHHHHHHH
Confidence 3466776666554432 2222 2 234677778888899999999999753 25788 68999998777
Q ss_pred HHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhc
Q psy11047 275 LLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKK 350 (943)
Q Consensus 275 L~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~ 350 (943)
+... +. ..+| + .+.+...+|++- +++. .| ..+..++++..+..++++++..++++
T Consensus 94 ~~~l----~~----~~~G--------d-~v~~~~~g~~~~-~~~~~a~~~G-~~~~~~~~~~~~~~~~~~~~~~i~~~-- 152 (377)
T 3e77_A 94 PLNL----IG----LKAG--------R-CADYVVTGAWSA-KAAEEAKKFG-TINIVHPKLGSYTKIPDPSTWNLNPD-- 152 (377)
T ss_dssp HHHH----GG----GSTT--------C-EEEECCCSHHHH-HHHHHHTTTS-EEEECSCCCSSSCSCCCGGGCCCCTT--
T ss_pred HHhc----cC----CCCC--------C-eEEEEECCHHHH-HHHHHHHHhC-CceEEeccCCCcCCCCChHHhccCCC--
Confidence 6642 11 0111 1 244456677763 3332 34 35666788767777777765555433
Q ss_pred cCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccc
Q psy11047 351 KHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA 430 (943)
Q Consensus 351 kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~ 430 (943)
+.+|+.+...|.+|.+.|+ |++ ++|+ ++||||+++.. .. |.
T Consensus 153 ----t~lV~~~h~et~tG~~~pi--i~~-----------------------~~~~-------~~~vD~~q~~g-~~--~i 193 (377)
T 3e77_A 153 ----ASYVYYCANETVHGVEFDF--IPD-----------------------VKGA-------VLVCDMSSNFL-SK--PV 193 (377)
T ss_dssp ----CSCEEEESEETTTTEECSS--CCC-----------------------CTTC-------CEEEECTTTTT-SS--CC
T ss_pred ----ccEEEEeCccCchheEchh--hhc-----------------------cCCC-------EEEEEcccccC-CC--CC
Confidence 5678899999999999998 544 6899 99999998766 32 11
Q ss_pred ccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchh-------hhhcccCc
Q psy11047 431 ARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGAL-------HRTFNVEP 503 (943)
Q Consensus 431 ~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L-------~~af~~~p 503 (943)
.. +..|-+++++|||++.+.-..+ ...-...|
T Consensus 194 -------------------------------d~----------~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p 232 (377)
T 3e77_A 194 -------------------------------DV----------SKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECP 232 (377)
T ss_dssp -------------------------------CG----------GGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSC
T ss_pred -------------------------------ch----------hhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCC
Confidence 01 1123488999999993222211 00000111
Q ss_pred cccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccccc-chhhhhcccccc
Q psy11047 504 LYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCL-GTAMIVKGLGFY 582 (943)
Q Consensus 504 ~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~-g~~~i~~~~~~~ 582 (943)
.|+ ++..+.-..++ |.|....|+.|+.+.++.+.+ . |++.|.++
T Consensus 233 ~~~---------~~~~~~~~~~~-------~~Tp~v~~i~~l~~al~~l~~---------------~GG~~~i~~~---- 277 (377)
T 3e77_A 233 SVL---------EYKVQAGNSSL-------YNTPPCFSIYVMGLVLEWIKN---------------NGGAAAMEKL---- 277 (377)
T ss_dssp GGG---------CHHHHHTTTTC-------SSCCCHHHHHHHHHHHHHHHH---------------TTHHHHHHHH----
T ss_pred chh---------hHHHHhhcCCC-------CCCchHHHHHHHHHHHHHHHH---------------ccCHHHHHHH----
Confidence 121 11100001111 124455666777777777543 2 45555443
Q ss_pred cccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEec-C--CCcc-EEEEEecCCC---hHHHHHHHHHhccCcE
Q psy11047 583 KMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA-A--RHLG-MVVIRLLGEN---ILTEKLLKRLNSKGRL 655 (943)
Q Consensus 583 ~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~-~--~~l~-iV~Fr~~g~n---~l~~~Ll~~L~~~G~~ 655 (943)
..++++++.+.|.++|++++.. + ...+ +++|++++.+ .+...+++.+.++|.+
T Consensus 278 --------------------~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~ 337 (377)
T 3e77_A 278 --------------------SSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNML 337 (377)
T ss_dssp --------------------HHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEE
T ss_pred --------------------HHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcE
Confidence 5789999999999999998643 2 2344 6999998742 3445777888777753
Q ss_pred EEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 656 HCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 656 ~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+.+ ..+..+.+|++++.++|.+||+++++.|+++.++
T Consensus 338 -~~~-g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 338 -SLK-GHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp -SCB-CCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -EeC-CCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 322 2233456999999999999999999999988654
No 50
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.67 E-value=2.7e-14 Score=155.90 Aligned_cols=318 Identities=11% Similarity=0.023 Sum_probs=191.6
Q ss_pred HHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhccc
Q psy11047 210 DMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQS 289 (943)
Q Consensus 210 d~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~ 289 (943)
+.+...++.....+..++...++|. .+++++|.+. .+++++||+|+..++.+.+ +
T Consensus 21 ~a~~~~l~~~~~~~~~~~~~~~l~~----~la~~~~~~~------------~i~~~sGt~al~~~l~~l~---~------ 75 (388)
T 1b9h_A 21 NGLVRALEQGQWWRMGGDEVNSFER----EFAAHHGAAH------------ALAVTNGTHALELALQVMG---V------ 75 (388)
T ss_dssp HHHHHHHHTSCCBTTTCSHHHHHHH----HHHHHTTCSE------------EEEESCHHHHHHHHHHHTT---C------
T ss_pred HHHHHHHHcCCeeecCCHHHHHHHH----HHHHHhCCCe------------EEEeCCHHHHHHHHHHHcC---C------
Confidence 3444444433233445566666665 5577777652 3556667999988877531 0
Q ss_pred CCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccc
Q psy11047 290 HPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFL 368 (943)
Q Consensus 290 ~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tG 368 (943)
.+| -.|+++..+|.++..++..-+..++.++++. ++.+|+++|+++|+.+ +.+|+ .++.+|
T Consensus 76 ~~g---------d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG 137 (388)
T 1b9h_A 76 GPG---------TEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR------TKVIM---PVHMAG 137 (388)
T ss_dssp CTT---------CEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEEC---CBCGGG
T ss_pred CCc---------CEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEE---EeCCcc
Confidence 122 2477889999999988854444788899876 4899999999998643 44555 567789
Q ss_pred ccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhH
Q psy11047 369 VVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILT 448 (943)
Q Consensus 369 aIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n 448 (943)
.+.|+++|.+ +|++||+ |+|+|++++.+..+ .
T Consensus 138 ~~~~l~~i~~--------------------la~~~~~-------~li~D~a~~~g~~~---~------------------ 169 (388)
T 1b9h_A 138 LMADMDALAK--------------------ISADTGV-------PLLQDAAHAHGARW---Q------------------ 169 (388)
T ss_dssp CCCCHHHHHH--------------------HHHHHTC-------CBCEECTTCTTCEE---T------------------
T ss_pred CcCCHHHHHH--------------------HHHHcCC-------EEEEecchhcCCcc---C------------------
Confidence 9999999999 9999999 99999999754111 0
Q ss_pred HHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC--------ccCcch--hhhhcccCccccccCCCCcccccC
Q psy11047 449 EKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR--------VKNSGA--LHRTFNVEPLYLRHENSGLAIDYM 518 (943)
Q Consensus 449 ~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~--------vr~~~~--L~~af~~~p~YL~~~~~g~~~d~~ 518 (943)
| .. +..+..++..+++.||++. .++... +.. +.. +...........+.
T Consensus 170 ----------~----~~----~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~ 227 (388)
T 1b9h_A 170 ----------G----KR----VGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYET-AFL---RHSCGRPRDDRRYF 227 (388)
T ss_dssp ----------T----EE----GGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHH-HHH---HTBTTCCTTCSSCC
T ss_pred ----------C----ee----cccccceEEEEccCCCcccCCCeEEEEECCHHHHHHHH-HHH---HHhCCCCccCccce
Confidence 0 00 1111257999999999985 122211 111 100 00000000000000
Q ss_pred ccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccC
Q psy11047 519 HWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYF 598 (943)
Q Consensus 519 ~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~ 598 (943)
......+-+...+.+++.+. +.+.+.+.+++
T Consensus 228 ~~~~g~~~~~~~~~~a~~~~--~~~~l~~~~~~----------------------------------------------- 258 (388)
T 1b9h_A 228 HKIAGSNMRLNEFSASVLRA--QLARLDEQIAV----------------------------------------------- 258 (388)
T ss_dssp CCSCCCBCBCBHHHHHHHHH--HHTTHHHHHHH-----------------------------------------------
T ss_pred eecccccCCcCHHHHHHHHH--HHHHHHHHHHH-----------------------------------------------
Confidence 01111111233343333221 11222222222
Q ss_pred CcHHHHHHHHHHHHHHhCCCCeEEecC------CCccEEEEEecCCC-hHHHHHHHHHhccCcEEEe---ecccC-----
Q psy11047 599 PKFQSVRLAQKFEALVLGDPRFEIPAA------RHLGMVVIRLLGEN-ILTEKLLKRLNSKGRLHCV---PASLR----- 663 (943)
Q Consensus 599 p~~~~~~LA~~l~~~L~~~p~~eIl~~------~~l~iV~Fr~~g~n-~l~~~Ll~~L~~~G~~~~s---~t~~~----- 663 (943)
..++++++.+.|.+.|++++..+ ...+++.|++++.. ....++.+.|.++|...-. +....
T Consensus 259 ----~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~ 334 (388)
T 1b9h_A 259 ----RDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWE 334 (388)
T ss_dssp ----HHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHH
T ss_pred ----HHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHh
Confidence 24567888889988899988753 23578899987542 1256788888888864322 11000
Q ss_pred ---------------------CCcEEEEeecCCC-CHHHHHHHHHHHHHHHH
Q psy11047 664 ---------------------IQGLGRAQNFTRT-TNDDITRDWNEIRNTAT 693 (943)
Q Consensus 664 ---------------------g~~~lR~v~~~~t-t~edId~ll~~I~~~~~ 693 (943)
....+|+.+++.+ |++||+++++.|+++.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 335 LGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp SSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence 0237999999999 99999999999988754
No 51
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.67 E-value=1.5e-15 Score=163.52 Aligned_cols=296 Identities=12% Similarity=0.055 Sum_probs=190.9
Q ss_pred HHHHHHHHHH-HHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 230 TELEIITMNW-LGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 230 teLE~~Vi~w-La~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
.....++.++ +++++|.+ ..+||+|||+|+..++.+.. .+| -.|++++
T Consensus 52 ~~~~~~l~~~~la~~~~~~------------~v~~~~g~t~a~~~~~~~~~----------~~g---------d~vl~~~ 100 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD------------VARVTNGAREAKFAVMHSLA----------KKD---------AWVVMDE 100 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS------------EEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCC------------EEEEeCChHHHHHHHHHHHh----------CCC---------CEEEEcc
Confidence 3445567778 89999875 37899999999988887642 122 3578889
Q ss_pred CCchHHHHHHHHCCccEEEEe--cCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccc
Q psy11047 309 QAHSSVEKAGLIGLVNMRYIE--SDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLG 386 (943)
Q Consensus 309 ~aHySv~KAa~LG~~~v~~Vp--~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~ 386 (943)
.+|++...++...+.+++.++ .++++.+|+++|+++|+....+ ..+.+|+.+...+.+|.+.|+++|.+
T Consensus 101 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~-------- 171 (371)
T 2e7j_A 101 NCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAK-------- 171 (371)
T ss_dssp TCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHH--------
T ss_pred CcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHH--------
Confidence 999999998865445888999 8888999999999999854321 23678889999999999999999999
Q ss_pred cccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccch
Q psy11047 387 FYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPA 466 (943)
Q Consensus 387 ~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~ 466 (943)
+|++||+ |+++|++|+.+ .+ + . ..
T Consensus 172 ------------~~~~~~~-------~li~D~a~~~~-~~--~---------------------------------~-~~ 195 (371)
T 2e7j_A 172 ------------VCSEYDV-------PLLVNGAYAIG-RM--P---------------------------------V-SL 195 (371)
T ss_dssp ------------HHHTTTC-------CEEEECTTTBT-TB--C---------------------------------C-CH
T ss_pred ------------HHHHcCC-------eEEEECccccC-CC--C---------------------------------C-Ch
Confidence 9999999 99999999876 22 0 0 01
Q ss_pred hhhhcCCCCeeEEEEcCCCccCccCc-chhhhhcccCccc----cccCCCCcccccCcccc-CCCCCcch-HHHHHHHHH
Q psy11047 467 SLRIQGLGRAQNFTIVPSSLLRVKNS-GALHRTFNVEPLY----LRHENSGLAIDYMHWQI-PLSKRFRA-LKLWFVIRN 539 (943)
Q Consensus 467 r~~l~Gie~ADSItiDpHK~L~vr~~-~~L~~af~~~p~Y----L~~~~~g~~~d~~~~ti-e~SRrfrA-LklW~tLr~ 539 (943)
.. + .+|.++.++||+++...+ +.+. ..... +.....+.. ..+.+ .++-...+ ..+..+++.
T Consensus 196 ~~-~----~~di~~~s~sK~~~~~~~~G~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~ 263 (371)
T 2e7j_A 196 KE-I----GADFIVGSGHKSMAASGPIGVMG----MKEEWAEIVLRRSEKYKN---KEVELLGCTARGATIITLMASFPH 263 (371)
T ss_dssp HH-H----TCSEEEEEHHHHSSCCSSCEEEE----ECTTTTTTTTCBCSSCTT---SBGGGTTCCCCSHHHHHHHHHHHH
T ss_pred hh-c----CCCEEEecCCcCCCCCCCcEEEE----EechhhhhhccccccCcc---cccccccCCcCHHHHHHHHHHHHH
Confidence 11 1 368999999998873211 1110 00111 110000000 00000 11111111 111112221
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHH--HHHHHHHHHHHhCC
Q psy11047 540 FGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQS--VRLAQKFEALVLGD 617 (943)
Q Consensus 540 ~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~--~~LA~~l~~~L~~~ 617 (943)
+.. +..++ . .++++++.+.|++.
T Consensus 264 ~~~----~~~~~---------------------------------------------------~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 264 VRE----RIKRW---------------------------------------------------DEEVEKARRFAAEMEKL 288 (371)
T ss_dssp HHH----HGGGH---------------------------------------------------HHHHHHHHHHHHHHHHT
T ss_pred HHH----HHHHH---------------------------------------------------HHHHHHHHHHHHHHHHc
Confidence 111 00000 2 35677888888777
Q ss_pred CCeEEecCC--CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc--c--CC--CcEEE-EeecCC-CCHHHHHHHHHH
Q psy11047 618 PRFEIPAAR--HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS--L--RI--QGLGR-AQNFTR-TTNDDITRDWNE 687 (943)
Q Consensus 618 p~~eIl~~~--~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~--~--~g--~~~lR-~v~~~~-tt~edId~ll~~ 687 (943)
++++..++ ..+++.|++. -..++.+.|.++|. ++.+.. . .+ ..++| ++++.. +++++++++++.
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi-~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~ 362 (371)
T 2e7j_A 289 -GIKQLGDNPHNHDLMFFHAE----VLYEISKKAKGGRF-FLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNA 362 (371)
T ss_dssp -TCEEESSSSCCSSEEEEECH----HHHHHHHHSSSGGG-HHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHH
T ss_pred -CcEEecCCCccCceEEEECC----CHHHHHHHHHHCCE-EEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHH
Confidence 88888654 5788999885 24677888877775 333311 1 02 57899 888877 899999999999
Q ss_pred HHHHHHH
Q psy11047 688 IRNTATE 694 (943)
Q Consensus 688 I~~~~~~ 694 (943)
|+++.++
T Consensus 363 l~~~~~~ 369 (371)
T 2e7j_A 363 FKEIIEK 369 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9887653
No 52
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.66 E-value=1e-16 Score=179.84 Aligned_cols=306 Identities=9% Similarity=-0.033 Sum_probs=181.9
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE-cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCc-eE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-LV 303 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf-TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~-~v 303 (943)
++.+.++-.++++.+++++|.+++ ...+| |+|||+|+..++... + .+| .+ .+
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~---------~evif~t~~~T~a~n~ai~~l----~------~~g-------d~v~~ 120 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSN---------YKVLFCHGGGRGQFAGVPLNL----L------GDK-------TTADY 120 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTT---------EEEEEEESCTTHHHHHHHHHH----C------TTC-------CEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------ceEEEEcCCchHHHHHHHHhc----c------CCC-------CeEEE
Confidence 455566666899999999999753 25788 799999998776542 1 122 11 22
Q ss_pred EEecCCCchHHHHHHHHCCccEEEEecC--CCCC-cCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc-ccHHHhhhh
Q psy11047 304 AYCSDQAHSSVEKAGLIGLVNMRYIESD--DKLS-LRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV-DSYCCLGTA 379 (943)
Q Consensus 304 V~~S~~aHySv~KAa~LG~~~v~~Vp~D--~~gr-mD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI-DpL~eIa~~ 379 (943)
+.++..+|.++..+...| .+..|+++ +.|. +++++++.+|+++ +.+|+.+...|.+|.+ +|+++|+
T Consensus 121 ~~~~~~~~~~~~~a~~~G--~v~~v~~~~~~~G~~~~~~~~~~~l~~~------t~lV~~~h~et~tG~~i~pi~~i~-- 190 (386)
T 3qm2_A 121 VDAGYWAASAIKEAKKYC--APQIIDAKITVDGKRAVKPMREWQLSDN------AAYLHYCPNETIDGIAIDETPDFG-- 190 (386)
T ss_dssp EESSHHHHHHHHHHTTTS--EEEEEECEEEETTEEEECCGGGCCCCTT------CSCEEECSEETTTTEECCCCCCCC--
T ss_pred EeCCHHHHHHHHHHHHhC--CeEEEecCcccCCCCCCchHHHhhcCCC------CcEEEEECCcCCcCEecCchhhhc--
Confidence 333333333232232456 68999998 6786 8888887766544 5678899999999995 9877653
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKG 459 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G 459 (943)
+|+ ++||||+++.. .. |.
T Consensus 191 -----------------------~g~-------~~~vDa~qs~g-~~--pi----------------------------- 208 (386)
T 3qm2_A 191 -----------------------PEV-------VVTADFSSTIL-SA--PL----------------------------- 208 (386)
T ss_dssp -----------------------TTC-------CEEEECTTTTT-SS--CC-----------------------------
T ss_pred -----------------------CCC-------EEEEEcccccC-CC--CC-----------------------------
Confidence 578 99999998765 32 11
Q ss_pred cccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccc--cCCCCCcchHHHHHHH
Q psy11047 460 RLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQ--IPLSKRFRALKLWFVI 537 (943)
Q Consensus 460 ~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~t--ie~SRrfrALklW~tL 537 (943)
.. . ..|-+++++|||++.+.-..|. ..+..+..-.. ..+.+.+|. .+..+ .+.|.
T Consensus 209 --dv---~-------~~~~~~~s~hK~lGP~G~g~l~----v~~~~~~~~~~-~~p~~~~~~~~~~~~~------~~gTp 265 (386)
T 3qm2_A 209 --DV---S-------RYGVIYAGAQKNIGPAGLTLVI----VREDLLGKAHE-SCPSILDYTVLNDNDS------MFNTP 265 (386)
T ss_dssp --CG---G-------GCSEEEEETTTTTCCTTEEEEE----EEGGGCSCCCT-TSCGGGCHHHHHHC-------------
T ss_pred --Cc---c-------ccCEEEEecccccCCCccEEEE----ECHHHHhhhcc-cCCcHHHHHHHhhcCC------CCCCC
Confidence 01 1 1134669999999933222220 00000000000 000011111 01111 12356
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccc-chhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhC
Q psy11047 538 RNFGIKGLQKHIREIFSGLALPAFLVVDSYCCL-GTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 616 (943)
Q Consensus 538 r~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~-g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~ 616 (943)
...|+.|+.+.++.+.+ . |++.+.++ ..+|++++.+.|.+
T Consensus 266 ~v~~i~~l~~Al~~~~~---------------~gG~~~i~~~------------------------~~~l~~~l~~~l~~ 306 (386)
T 3qm2_A 266 PTFAWYLSGLVFKWLKA---------------QGGVAAMHKI------------------------NQQKAELLYGVIDN 306 (386)
T ss_dssp CCSHHHHHHHHHHHHHH---------------HTHHHHHHHH------------------------HHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHH---------------hcCHHHHHHH------------------------HHHHHHHHHHHHHH
Confidence 66677778877777532 2 44444332 46789999999988
Q ss_pred CCCeEEecC---CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 617 DPRFEIPAA---RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 617 ~p~~eIl~~---~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
++-+....+ +..++++|++++. .+...++..|.++|.. +. ...+..+.+|++++.++|++||+++++.|+++.+
T Consensus 307 ~~~~~~~~~~~~rs~~iv~f~~~~~-~~~~~~~~~L~~~gI~-~~-~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 307 SDFYRNDVAQANRSRMNVPFQLADN-TLDKVFLEESFAAGLH-AL-KGHRVVGGMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp CSSEECCBCGGGBCSSEEEEEESSG-GGHHHHHHHHHHTTEE-CC-BCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCHHHcCceEEEEECCCc-cccHHHHHHHHHCCCE-Ee-CCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 843233322 2346899999852 2346788888888853 22 1122234599999999999999999999998865
Q ss_pred H
Q psy11047 694 E 694 (943)
Q Consensus 694 ~ 694 (943)
+
T Consensus 384 ~ 384 (386)
T 3qm2_A 384 R 384 (386)
T ss_dssp H
T ss_pred h
Confidence 4
No 53
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.65 E-value=7.2e-15 Score=160.11 Aligned_cols=328 Identities=9% Similarity=-0.025 Sum_probs=197.5
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhc
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQ 287 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~ 287 (943)
+.+.+...++.....|...+...+++..+.+|+.+.+|++... ...++|+|||+|+..++.+..
T Consensus 48 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~--------~~v~~~~g~~~a~~~~~~~~~-------- 111 (388)
T 1j32_A 48 IVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA--------DNILVTNGGKQSIFNLMLAMI-------- 111 (388)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--------GGEEEESHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh--------hhEEEcCCHHHHHHHHHHHhc--------
Confidence 3344444444332334444557889999999999999975321 368999999999988877541
Q ss_pred ccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCC
Q psy11047 288 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALP 365 (943)
Q Consensus 288 ~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT 365 (943)
.+| -.|++++.+|.++..++...+.+++.++.+. .+.+|+++|+++|+.+ +.+|+.+..++
T Consensus 112 --~~g---------d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~n 174 (388)
T 1j32_A 112 --EPG---------DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSN 174 (388)
T ss_dssp --CTT---------CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCT
T ss_pred --CCC---------CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCC
Confidence 122 2477788899999888865444788888874 5789999999998643 56777777888
Q ss_pred ccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeec
Q psy11047 366 AFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLL 442 (943)
Q Consensus 366 ~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~ 442 (943)
.+|.+ +++++|.+ +|++||+ |+++|.+|+++ .+.
T Consensus 175 ptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~-~~~--------------- 211 (388)
T 1j32_A 175 PTGMVYTPDEVRAIAQ--------------------VAVEAGL-------WVLSDEIYEKI-LYD--------------- 211 (388)
T ss_dssp TTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC-BCT---------------
T ss_pred CCCcCCCHHHHHHHHH--------------------HHHHcCC-------EEEEEccchhc-ccC---------------
Confidence 89998 45888888 9999999 99999999876 320
Q ss_pred chhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCc
Q psy11047 443 GENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMH 519 (943)
Q Consensus 443 ~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~ 519 (943)
|. ..+.......+....|.+..++||+++... ...+ ..+..+..-.. .....
T Consensus 212 ----------------~~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~-----~~~~~~~~l~~--~~~~~- 266 (388)
T 1j32_A 212 ----------------DA-QHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA-----GPVPLVKAATK--IQGHS- 266 (388)
T ss_dssp ----------------TC-CCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE-----CCHHHHHHHHH--HHHTT-
T ss_pred ----------------CC-CCCCHHHccccccCCEEEEeechhccCCcccceEEEE-----eCHHHHHHHHH--HHhhc-
Confidence 00 000000000000135899999999987322 1111 01111000000 00000
Q ss_pred cccCCCCCcchHHHHHHHHHHH--HHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCccccccc
Q psy11047 520 WQIPLSKRFRALKLWFVIRNFG--IKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSY 597 (943)
Q Consensus 520 ~tie~SRrfrALklW~tLr~~G--~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~ 597 (943)
+. ....+..++....+. .+.+.+..++
T Consensus 267 -~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~---------------------------------------------- 295 (388)
T 1j32_A 267 -TS----NVCTFAQYGAIAAYENSQDCVQEMLAA---------------------------------------------- 295 (388)
T ss_dssp -TC----SCCHHHHHHHHHHHHSCSHHHHHHHHH----------------------------------------------
T ss_pred -cc----CCCHHHHHHHHHHHhCCcHHHHHHHHH----------------------------------------------
Confidence 00 112333333333332 1122222222
Q ss_pred CCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHHhc-cCcEEEeec-ccCCCcEEEEeecCC
Q psy11047 598 FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNS-KGRLHCVPA-SLRIQGLGRAQNFTR 675 (943)
Q Consensus 598 ~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~-~G~~~~s~t-~~~g~~~lR~v~~~~ 675 (943)
..++++++.+.|++.|++++..+.....+.+++...+....++.++|.+ +|. ++.+. ......++|+++.
T Consensus 296 -----~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~iRis~~-- 367 (388)
T 1j32_A 296 -----FAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQV-ATVPGAAFGADDCIRLSYA-- 367 (388)
T ss_dssp -----HHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCE-ECEEGGGGTCTTBEEEECC--
T ss_pred -----HHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCE-EEeChhhhCCCCcEEEEec--
Confidence 2456778888888888888765433223333443211124678888875 575 44442 2323578999665
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy11047 676 TTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 676 tt~edId~ll~~I~~~~~~l 695 (943)
+++++|+++++.|.++.+++
T Consensus 368 ~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 368 TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 68999999999998876554
No 54
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.65 E-value=1.2e-14 Score=159.64 Aligned_cols=298 Identities=14% Similarity=0.039 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+++++++|.+.+ ..+||+|||+++..++.+++..... ..+| +-+|+++...
T Consensus 71 ~~~~~l~~~la~~~g~~~~----------~v~~~~g~t~al~~al~~~~~~~~~----~~~g--------d~vii~~~~~ 128 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG----------EVVVTDTTSINLFKVLSAALRVQAT----RSPE--------RRVIVTETSN 128 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT----------SEEECSCHHHHHHHHHHHHHHHHHH----HSTT--------CCEEEEETTS
T ss_pred HHHHHHHHHHHHHcCCCcc----------cEEEeCChhHHHHHHHHhhcccccc----cCCC--------CcEEEEcCCC
Confidence 3445678899999998643 5789999999987787766421100 0122 2357778889
Q ss_pred chHHHHHH-HH---C--CccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccc
Q psy11047 311 HSSVEKAG-LI---G--LVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKG 384 (943)
Q Consensus 311 HySv~KAa-~L---G--~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d 384 (943)
|.++..++ .+ . +.+++.++. +++|+++|+.+ +.+|+.+..++.+|.+.|+++|.+
T Consensus 129 ~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~------ 189 (416)
T 1qz9_A 129 FPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQD------TAVVMLTHVNYKTGYMHDMQALTA------ 189 (416)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTT------EEEEEEESBCTTTCBBCCHHHHHH------
T ss_pred CCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCC------ceEEEEeccccCcccccCHHHHHH------
Confidence 99877654 22 1 336777776 67788777542 678899999999999999999999
Q ss_pred cccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccccc
Q psy11047 385 LGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCV 464 (943)
Q Consensus 385 ~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p 464 (943)
+|++||+ |+++|+|++.+ .. ..+
T Consensus 190 --------------l~~~~~~-------~li~D~a~~~g-~~-----------------------------------~~~ 212 (416)
T 1qz9_A 190 --------------LSHECGA-------LAIWDLAHSAG-AV-----------------------------------PVD 212 (416)
T ss_dssp --------------HHHHHTC-------EEEEECTTTTT-TS-----------------------------------CCC
T ss_pred --------------HHHHcCC-------EEEEEcccccc-Cc-----------------------------------CCC
Confidence 9999999 99999999754 21 011
Q ss_pred chhhhhcCCCCeeEEEEcCCCccC--ccCcchhh--hhc--ccCccccccCCCCcc--ccc-Ccccc-CCCCCc-----c
Q psy11047 465 PASLRIQGLGRAQNFTIVPSSLLR--VKNSGALH--RTF--NVEPLYLRHENSGLA--IDY-MHWQI-PLSKRF-----R 529 (943)
Q Consensus 465 ~~r~~l~Gie~ADSItiDpHK~L~--vr~~~~L~--~af--~~~p~YL~~~~~g~~--~d~-~~~ti-e~SRrf-----r 529 (943)
.... .+|.+++++||+++ .+--+.+. ..+ ...+ +.. +..|.. .+. ..+.. ...+++ .
T Consensus 213 -~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~-~~~-g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (416)
T 1qz9_A 213 -LHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQ-PLS-GWFGHSRQFAMEPRYEPSNGIARYLCGTQP 284 (416)
T ss_dssp -HHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCC-SCC-CGGGBCTTSCCCSSCCBCSSGGGGCCSCCC
T ss_pred -hhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHHhccCC-Ccc-ccCccccccCCCCccCCCcchHHhcCCCCC
Confidence 1111 36999999999975 22101110 000 0011 000 000000 000 01111 001111 1
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHH
Q psy11047 530 ---ALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRL 606 (943)
Q Consensus 530 ---ALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~L 606 (943)
...++.+++.+...++.+..++ ..++
T Consensus 285 ~~~~~a~~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~ 313 (416)
T 1qz9_A 285 ITSLAMVECGLDVFAQTDMASLRRK---------------------------------------------------SLAL 313 (416)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHH---------------------------------------------------HHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHH---------------------------------------------------HHHH
Confidence 1122223333222233333332 2456
Q ss_pred HHHHHHHHhCC-C--CeEEecCC----CccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeec-CCCCH
Q psy11047 607 AQKFEALVLGD-P--RFEIPAAR----HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNF-TRTTN 678 (943)
Q Consensus 607 A~~l~~~L~~~-p--~~eIl~~~----~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~-~~tt~ 678 (943)
++++.+.|.+. | ++++..+. ..++++|++.+ ...+.++|.++|. ++. ..+..++|+++. +.+++
T Consensus 314 ~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~gi-~~~---~~~~~~lRis~~~~~~t~ 385 (416)
T 1qz9_A 314 TDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALIDRGV-IGD---YREPRIMRFGFTPLYTTF 385 (416)
T ss_dssp HHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHHTTTE-ECE---EETTTEEEEECCTTTCCH
T ss_pred HHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHHhCCc-Eec---cCCCCeEEEeCcccCCCH
Confidence 77777777764 6 78887653 47888998863 4678888888885 332 235679999776 58999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11047 679 DDITRDWNEIRNTAT 693 (943)
Q Consensus 679 edId~ll~~I~~~~~ 693 (943)
+||+++++.|+++.+
T Consensus 386 ~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 386 TEVWDAVQILGEILD 400 (416)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 55
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.64 E-value=6.1e-14 Score=152.49 Aligned_cols=300 Identities=9% Similarity=-0.004 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
.....+.+++++++|.++ .+++++||+|+..++.+.. .+ .-.|+++..+
T Consensus 88 ~~~~~l~~~la~~~~~~~------------~i~~~sGt~a~~~~l~~~~----------~~---------gd~v~~~~~~ 136 (399)
T 3tqx_A 88 TIHKELEKDISEFLGTDD------------TILYSSCFDANGGLFETLL----------GP---------EDAIISDELN 136 (399)
T ss_dssp HHHHHHHHHHHHHHTCSE------------EEEESCHHHHHHTTHHHHC----------CT---------TCEEEEETTC
T ss_pred hHHHHHHHHHHHHHCCCc------------EEEECchHHHHHHHHHHhc----------CC---------CCEEEECCcc
Confidence 444566778899998753 4677778999987765421 12 2357788999
Q ss_pred chHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 311 HSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 311 HySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
|.++..++.+.+..++.++. +|+++|++.|+....+|..+.+|+.+...+.+|.+.|+++|.+
T Consensus 137 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~------------ 199 (399)
T 3tqx_A 137 HASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICD------------ 199 (399)
T ss_dssp CHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHH------------
T ss_pred cHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHH------------
Confidence 99999988655557777775 5788999999886655555888888888899999999999999
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhh
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRI 470 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l 470 (943)
+|++||+ |+++|++|+.. .+. . .+ .+ .. ..
T Consensus 200 --------l~~~~~~-------~li~De~~~~~-~~~--~---------------------------~~---~~-~~-~~ 229 (399)
T 3tqx_A 200 --------LADKYNA-------LVMVDDSHAVG-FIG--E---------------------------NG---RG-TP-EY 229 (399)
T ss_dssp --------HHHHTTC-------EEEEECTTTTT-TSS--T---------------------------TS---CC-HH-HH
T ss_pred --------HHHHcCC-------EEEEECCcccc-ccC--C---------------------------CC---Cc-hH-Hh
Confidence 9999999 99999999633 110 0 00 00 01 11
Q ss_pred cCC-CCeeEEEEcCCCccC-ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH--HHHH
Q psy11047 471 QGL-GRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI--KGLQ 546 (943)
Q Consensus 471 ~Gi-e~ADSItiDpHK~L~-vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~--~Gl~ 546 (943)
.++ ...|.++.++||+++ .+.. .+. ..+..+..-.. ....+...+ ....+.++..+..+.. .++.
T Consensus 230 ~~~~~~~di~~~s~sK~~~g~~gG-~~~----~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~ 298 (399)
T 3tqx_A 230 CGVADRVDILTGTLGKALGGASGG-YTS----GHKEIIEWLRN----RSRPYLFSN--TVAPVIVATSLKVLELLKTEGP 298 (399)
T ss_dssp HTCTTCCSEEEEESSSSSCSSCCE-EEE----ECHHHHHHHHH----HCHHHHSSC--CCCHHHHHHHHHHHHHHHHTHH
T ss_pred hCCCCCCcEEEecchHhcccCceE-EEE----cCHHHHHHHHH----hCcceeccC--CCcHHHHHHHHHHHHHHhhccH
Confidence 222 467999999999998 5432 110 01111100000 000011111 1112222222222211 2222
Q ss_pred HHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC
Q psy11047 547 KHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR 626 (943)
Q Consensus 547 ~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~ 626 (943)
+..++ ..++++++.+.|++. ++++. ++
T Consensus 299 ~~~~~---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~-~~ 325 (399)
T 3tqx_A 299 QLRKQ---------------------------------------------------LQENSRYFRAGMEKL-GFQLV-PG 325 (399)
T ss_dssp HHHHH---------------------------------------------------HHHHHHHHHHHHHHH-TCCBC-CC
T ss_pred HHHHH---------------------------------------------------HHHHHHHHHHHHHHc-CCCcC-CC
Confidence 22222 234455666666554 66665 66
Q ss_pred CccEEEEEecCCChHHHHHHHHHhccCcEEEeecc----cCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 627 HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS----LRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 627 ~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~----~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
..+++.|.+.+. .....+.++|.++|. ++.+.. ..+..++|++++..+++++++++++.|+++.++
T Consensus 326 ~~~~~~~~~~~~-~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 326 NHPIIPVMLGDA-QLATNMADHLLQEGI-YVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp SSSEEEEEEECH-HHHHHHHHHHHHTTE-ECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHCCC-EEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 788888888642 235788888888875 444432 234579999998899999999999999887654
No 56
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.64 E-value=2.1e-14 Score=155.74 Aligned_cols=326 Identities=8% Similarity=-0.045 Sum_probs=196.8
Q ss_pred hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
++.+. +.+...+......|... ..+++..+.+|+++.+|++... ...++|+|||+|+..++.+..
T Consensus 42 ~~~v~-~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~--------~~i~~~~g~~~a~~~~~~~l~---- 106 (391)
T 3dzz_A 42 APEIM-ASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE--------DWCVFASGVVPAISAMVRQFT---- 106 (391)
T ss_dssp CHHHH-HHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG--------GGEEEESCHHHHHHHHHHHHS----
T ss_pred CHHHH-HHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH--------HHEEECCCHHHHHHHHHHHhC----
Confidence 44444 44444444332333322 5789999999999999964321 368999999999988876531
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC---CCCCcCHHHHHHHHHHhhccCCCcEEEEE
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFIFS 360 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D---~~grmD~daLe~aI~~d~~kG~~P~~VVa 360 (943)
.+| -.|+++..+|.++..++...+.+++.++.+ .++.+|+++|+++|+.. .+.+|+.
T Consensus 107 ------~~g---------d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i 166 (391)
T 3dzz_A 107 ------SPG---------DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVF 166 (391)
T ss_dssp ------CTT---------CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEE
T ss_pred ------CCC---------CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEE
Confidence 122 247788999999998886544578888874 33459999999999732 2667777
Q ss_pred ecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccccee
Q psy11047 361 GLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 437 (943)
Q Consensus 361 TaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~V 437 (943)
+...+.+|.+ +++++|++ +|++||+ ++++|.+|+++ .+.
T Consensus 167 ~~p~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~-~~~---------- 208 (391)
T 3dzz_A 167 CNPHNPIGYAWSEEEVKRIAE--------------------LCAKHQV-------LLISDEIHGDL-VLT---------- 208 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC-BCS----------
T ss_pred ECCCCCCCcccCHHHHHHHHH--------------------HHHHCCC-------EEEEecccccc-cCC----------
Confidence 8888899999 77999999 9999999 99999999876 220
Q ss_pred eeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCee--EEEEcCCCccCccC---cchhhhhcccCccc---cccC
Q psy11047 438 VIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQ--NFTIVPSSLLRVKN---SGALHRTFNVEPLY---LRHE 509 (943)
Q Consensus 438 cFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~AD--SItiDpHK~L~vr~---~~~L~~af~~~p~Y---L~~~ 509 (943)
|.... ..... +.+..| .+..++||+++... ...+.. ++.. +...
T Consensus 209 ---------------------g~~~~-~~~~~--~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~----~~~~~~~~~~~ 260 (391)
T 3dzz_A 209 ---------------------DEDIT-PAFTV--DWDAKNWVVSLISPSKTFNLAALHAACAIIP----NPDLRARAEES 260 (391)
T ss_dssp ---------------------SCCCC-CGGGS--CTTTGGGEEEEECSHHHHTCTTTCCEEEECC----SHHHHHHHHHH
T ss_pred ---------------------CCCce-ehhhc--CccccCcEEEEEeChhhccccchhheEEEEC----CHHHHHHHHHH
Confidence 00000 11111 011245 88999999986211 111100 0000 1000
Q ss_pred CCCcccccCccccCCCCCcchHHHHHHHHHHH--HHHHHHHHHHHHhcCCCccccccccccccchhhhhccccccccccc
Q psy11047 510 NSGLAIDYMHWQIPLSKRFRALKLWFVIRNFG--IKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 587 (943)
Q Consensus 510 ~~g~~~d~~~~tie~SRrfrALklW~tLr~~G--~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~ 587 (943)
.. ....++ ...+.+++....+. ...+.+..++
T Consensus 261 ~~----~~~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~------------------------------------ 294 (391)
T 3dzz_A 261 FF----LAGIGE------PNLLAIPAAIAAYEEGHDWLRELKQV------------------------------------ 294 (391)
T ss_dssp HH----HHTCSS------CCTTHHHHHHHHHHHCHHHHHHHHHH------------------------------------
T ss_pred HH----hhccCC------CCHHHHHHHHHHHhccHHHHHHHHHH------------------------------------
Confidence 00 000001 11122222222221 1222222222
Q ss_pred CCCcccccccCCcHHHHHHHHHHHHHHhC-CCCeEEecCCCccEEEEEecCCChHHHHHHHHHh-ccCcEEEeecc-c--
Q psy11047 588 TNFPNFILSYFPKFQSVRLAQKFEALVLG-DPRFEIPAARHLGMVVIRLLGENILTEKLLKRLN-SKGRLHCVPAS-L-- 662 (943)
Q Consensus 588 ~~~~~~~~~~~p~~~~~~LA~~l~~~L~~-~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~-~~G~~~~s~t~-~-- 662 (943)
..++++++.+.|++ .|++++..+.....+.+++.........+.++|. ++|. ++.+.. .
T Consensus 295 ---------------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi-~v~~g~~~~~ 358 (391)
T 3dzz_A 295 ---------------LRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGL-IISAGNGYRG 358 (391)
T ss_dssp ---------------HHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCE-ECEESGGGCT
T ss_pred ---------------HHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCE-EEeCchhhCC
Confidence 24567778888887 7899887654444445666532122567888885 6775 444322 2
Q ss_pred CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 663 RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 663 ~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.+..++|++++ +++++|+++++.|.++.++
T Consensus 359 ~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 359 NGHEFVRINLA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp TGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 23589999766 6899999999998877653
No 57
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.64 E-value=5.9e-15 Score=161.50 Aligned_cols=299 Identities=12% Similarity=0.083 Sum_probs=188.2
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.++...+++. .+++++|.+ .+++|+|||+|+..++.+++ + .+ .-.|
T Consensus 54 ~~~~~~~l~~----~la~~~~~~------------~~i~~~~gt~al~~~l~~~~---~------~~---------gd~v 99 (391)
T 3dr4_A 54 VGRFIVEFEK----AFADYCGVK------------HAIACNNGTTALHLALVAMG---I------GP---------GDEV 99 (391)
T ss_dssp CSHHHHHHHH----HHHHHHTCS------------EEEEESSHHHHHHHHHHHHT---C------CT---------TCEE
T ss_pred CChHHHHHHH----HHHHHhCCC------------cEEEeCCHHHHHHHHHHHcC---C------CC---------cCEE
Confidence 4555555555 556777764 47999999999988877642 0 12 2347
Q ss_pred EecCCCchHHHHHHHHCCccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 305 YCSDQAHSSVEKAGLIGLVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 305 ~~S~~aHySv~KAa~LG~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++..+|.+...++..-+..++.++++ +++.+|+++|+++|+++ +.+|+. ++.+|.+.|+++|.+
T Consensus 100 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~---~n~tG~~~~~~~i~~----- 165 (391)
T 3dr4_A 100 IVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPR------TKAIMP---VHLYGQICDMDPILE----- 165 (391)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTT------EEEECC---BCGGGCCCCHHHHHH-----
T ss_pred EECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCC------ceEEEE---ECCCCChhhHHHHHH-----
Confidence 788999999988886544588899988 67899999999888643 444543 468899999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ ++++|+||+.+..+ .
T Consensus 166 ---------------l~~~~~~-------~li~D~a~~~g~~~------------------------------------~ 187 (391)
T 3dr4_A 166 ---------------VARRHNL-------LVIEDAAEAVGATY------------------------------------R 187 (391)
T ss_dssp ---------------HHHHTTC-------EEEEECTTCTTCEE------------------------------------T
T ss_pred ---------------HHHHcCC-------EEEEECcccccceE------------------------------------C
Confidence 9999999 99999999854121 0
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccCc-------cCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHH
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLRV-------KNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFV 536 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~v-------r~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~t 536 (943)
.. ....+..++.+++++||+++. .....+...+. .+..++ ...+...+....+..++...+..+
T Consensus 188 ~~---~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~---~~~~~g---~~~~~~~~~~~~g~~~~~~~l~aa 258 (391)
T 3dr4_A 188 GK---KSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMR---LLRGQG---MDPNRRYWFPIVGFNYRMTNIQAA 258 (391)
T ss_dssp TE---ETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHH---HHHBTT---CCTTSTTCCSSCCCBCBCCHHHHH
T ss_pred Ce---eecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHH---HHHhcC---CCCCCcccccccccccCCCHHHHH
Confidence 00 011122478888889999972 11111111110 011111 000001111112223333344444
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhC
Q psy11047 537 IRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 616 (943)
Q Consensus 537 Lr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~ 616 (943)
+......++.+.+++ ..++++++.+.|.+
T Consensus 259 ~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~ 287 (391)
T 3dr4_A 259 IGLAQLERVDEHLAA---------------------------------------------------RERVVGWYEQKLAR 287 (391)
T ss_dssp HHHHHHHTHHHHHHH---------------------------------------------------HHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHH---------------------------------------------------HHHHHHHHHHHhhc
Confidence 444444555555554 34677888888888
Q ss_pred CCCeEEecC--C-----CccEEEEEecCC-ChHHHHHHHHHhccCcEEEeecc--------cC-------------CCcE
Q psy11047 617 DPRFEIPAA--R-----HLGMVVIRLLGE-NILTEKLLKRLNSKGRLHCVPAS--------LR-------------IQGL 667 (943)
Q Consensus 617 ~p~~eIl~~--~-----~l~iV~Fr~~g~-n~l~~~Ll~~L~~~G~~~~s~t~--------~~-------------g~~~ 667 (943)
. ++++..+ + ...++.+++.+. .....++.++|.++|.. +.+.. +. ....
T Consensus 288 ~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~-v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (391)
T 3dr4_A 288 L-GNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIE-SRPVFHPMHIMPPYAHLATDDLKIAEACGVDG 365 (391)
T ss_dssp G-TTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCC-CEECCCCGGGSGGGGGGCCTTCHHHHHHHHHE
T ss_pred C-CccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCc-eeecCCccccChhhhhcCcCCChHHHHHHhCe
Confidence 7 7877655 2 233566776531 12257888889888863 32210 00 1358
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 668 GRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 668 lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
+|+.+++.+|++||+++++.|+++
T Consensus 366 lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 366 LNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHTT
T ss_pred EEccCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999998764
No 58
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.63 E-value=3.1e-14 Score=157.66 Aligned_cols=125 Identities=12% Similarity=-0.024 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 233 EIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 233 E~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
-..+.+++++++|.+ ..++++|||+|+..++.+.+ + .+| -.|+++..+|.
T Consensus 44 ~~~l~~~la~~~g~~------------~~i~~~~gt~al~~~~~~~~---~------~~g---------d~Vl~~~~~~~ 93 (418)
T 2c81_A 44 ERKFAKAFADFNGVP------------YCVPTTSGSTALMLALEALG---I------GEG---------DEVIVPSLTWI 93 (418)
T ss_dssp HHHHHHHHHHHHTCS------------EEEEESCHHHHHHHHHHHTT---C------CTT---------CEEEEESSSCT
T ss_pred HHHHHHHHHHHhCCC------------cEEEeCCHHHHHHHHHHHcC---C------CCc---------CEEEECCCccH
Confidence 345667788899875 25899999999988877531 0 122 24778899999
Q ss_pred HHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccc
Q psy11047 313 SVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 313 Sv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~ 391 (943)
+...++...+.+++.++++. ++.+|+++|+++|+.+ +.+|+.+ +.+|.+.|+++|.+
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~------------- 151 (418)
T 2c81_A 94 ATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDK------TKAIIPV---HLFGSMANMDEINE------------- 151 (418)
T ss_dssp HHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTT------EEEECCB---CCTTCCCCHHHHHH-------------
T ss_pred hHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCC------CeEEEEe---CCcCCcccHHHHHH-------------
Confidence 99988865444888899875 7899999999888643 4455543 46899999999999
Q ss_pred ccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 392 LQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 392 L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|++|+.+
T Consensus 152 -------~~~~~~~-------~li~D~a~~~~ 169 (418)
T 2c81_A 152 -------IAQEHNL-------FVIEDCAQSHG 169 (418)
T ss_dssp -------HHHHTTC-------EEEEECTTCTT
T ss_pred -------HHHHCCC-------EEEEECccccc
Confidence 9999999 99999999876
No 59
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.62 E-value=1.7e-14 Score=174.38 Aligned_cols=131 Identities=12% Similarity=0.060 Sum_probs=101.3
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
...+.+++++|.+. ..++++|+|+||..++.+.. .+| -.|+++..+|.|+
T Consensus 209 ~~ee~la~l~G~d~-----------~i~~~~Gtt~a~~~~i~al~----------~~G---------D~Vlv~~~~h~s~ 258 (755)
T 2vyc_A 209 ESEKYAARVFGADR-----------SWSVVVGTSGSNRTIMQACM----------TDN---------DVVVVDRNCHKSI 258 (755)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHHC----------CTT---------CEEEEESSCCHHH
T ss_pred HHHHHHHHHhCCCc-----------eEEECCcHHHHHHHHHHHhc----------CCC---------CEEEECCCchHHH
Confidence 34567899999864 35678888899988876531 122 2578899999999
Q ss_pred HHHHHHCCccEEEEecCCC-----CCc-----CHHHHHHHHHHh----hccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 315 EKAGLIGLVNMRYIESDDK-----LSL-----RGDKLIEAIERD----KKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~-----grm-----D~daLe~aI~~d----~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
..++.+.+..++.++++.+ |.+ |+++|+++|++. .+++..|.+++++.+ |.+|.+.|+++|++
T Consensus 259 ~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~-- 335 (755)
T 2vyc_A 259 EQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQD-- 335 (755)
T ss_dssp HHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHH--
T ss_pred HHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHH--
Confidence 9998654457888887532 356 999999999863 124556667777776 57999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++|+|+||++.
T Consensus 336 ------------------ia~~~~~-------~livDeA~~~~ 353 (755)
T 2vyc_A 336 ------------------LLEKTSD-------RLHFDEAWYGY 353 (755)
T ss_dssp ------------------HHTTTCS-------EEEEECTTCTT
T ss_pred ------------------HHHHcCC-------EEEEECcCchh
Confidence 9999999 99999999865
No 60
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.61 E-value=4.5e-15 Score=163.33 Aligned_cols=298 Identities=12% Similarity=-0.031 Sum_probs=180.8
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE-cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf-TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
.+|...++..++.+++++++|.+.. ...+| |+|||+|+..++.+.. .+ + +
T Consensus 72 ~~~~~~~~~~~~~~~la~~~g~~~~---------~~i~~~t~g~t~al~~~~~~l~----------~~---------g-v 122 (398)
T 2fyf_A 72 RQAPVKNLVGRVRSGLAELFSLPDG---------YEVILGNGGATAFWDAAAFGLI----------DK---------R-S 122 (398)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCCTT---------CEEEEEETCHHHHHHHHHHHTC----------SS---------C-E
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC---------ceEEEeCCchhHHHHHHHHHhc----------CC---------C-e
Confidence 4676777778899999999999742 25788 9999999988876531 11 2 2
Q ss_pred EEecCCCchHH-HHHH-HHC-CccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 304 AYCSDQAHSSV-EKAG-LIG-LVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 304 V~~S~~aHySv-~KAa-~LG-~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
++++...|... .+.+ ..+ +..++.|+++ ++.++..+ +. ..+.+|+.+..++.+|.+.|+++|.+
T Consensus 123 ~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~~~~~----i~------~~~~~v~~~~~~nptG~~~~~~~i~~-- 189 (398)
T 2fyf_A 123 LHLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSAPEPQ----TD------PSVDVIAWAHNETSTGVAVAVRRPEG-- 189 (398)
T ss_dssp EEEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCCCCCC----CC------TTCSEEEEESEETTTTEECCCCCCTT--
T ss_pred EEEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCCCCcc----cc------CCCCEEEEeCcCCCcceecchHHhhh--
Confidence 33355556432 2233 342 3467788887 44433221 21 13678888889999999999999998
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCc
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGR 460 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~ 460 (943)
+ +|+ |+|+|+|++.+ ..
T Consensus 190 ------------------~---~~~-------~vivD~a~~~~-~~---------------------------------- 206 (398)
T 2fyf_A 190 ------------------S---DDA-------LVVIDATSGAG-GL---------------------------------- 206 (398)
T ss_dssp ------------------C---C-C-------EEEEECTTTTT-TS----------------------------------
T ss_pred ------------------h---cCC-------eEEEEeccccC-Cc----------------------------------
Confidence 5 899 99999999765 21
Q ss_pred ccccchhhhhcCCCCeeEEEEcCCCccCccCc-ch------hhhhcc-------cCccccccCCCCcccccC--ccccCC
Q psy11047 461 LHCVPASLRIQGLGRAQNFTIVPSSLLRVKNS-GA------LHRTFN-------VEPLYLRHENSGLAIDYM--HWQIPL 524 (943)
Q Consensus 461 ~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~------L~~af~-------~~p~YL~~~~~g~~~d~~--~~tie~ 524 (943)
..+ +..+|.++.++||+++.... .. +.+.+. ..+.|+.... ..... .+. .+
T Consensus 207 -~~~--------~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~ 273 (398)
T 2fyf_A 207 -PVD--------IAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI---AVENSLKNQT-YN 273 (398)
T ss_dssp -CCC--------GGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH---HHHHHTTTCC-SS
T ss_pred -ccC--------cccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHH---HhhhcccCCC-CC
Confidence 011 11369999999999984321 11 111110 0022332110 00000 000 01
Q ss_pred CCC-cchHHHHHHHHHHHHHH-HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHH
Q psy11047 525 SKR-FRALKLWFVIRNFGIKG-LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQ 602 (943)
Q Consensus 525 SRr-frALklW~tLr~~G~~G-l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~ 602 (943)
+-. .....+..+++.+...| +.+..++
T Consensus 274 t~~~~~~~a~~~al~~~~~~g~~~~~~~~--------------------------------------------------- 302 (398)
T 2fyf_A 274 TPAIATLALLAEQIDWLVGNGGLDWAVKR--------------------------------------------------- 302 (398)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTSHHHHHHH---------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHccCHHHHHHH---------------------------------------------------
Confidence 111 11123333444443333 4444443
Q ss_pred HHHHHHHHHHHHhCCCCeEEec-CC--Ccc-EEEEEecC-CChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCC
Q psy11047 603 SVRLAQKFEALVLGDPRFEIPA-AR--HLG-MVVIRLLG-ENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTT 677 (943)
Q Consensus 603 ~~~LA~~l~~~L~~~p~~eIl~-~~--~l~-iV~Fr~~g-~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt 677 (943)
..++++++.+.|++.|++++.. ++ ..+ +++|+++. .+ ..++.++|.++|..........+..++|++++..++
T Consensus 303 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t 380 (398)
T 2fyf_A 303 TADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVD--AGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVE 380 (398)
T ss_dssp HHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSC--HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCC--HHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCC
Confidence 3457788888888888999874 23 466 89999853 22 568888888887643222111235789999988999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11047 678 NDDITRDWNEIRNTAT 693 (943)
Q Consensus 678 ~edId~ll~~I~~~~~ 693 (943)
++|++++++.|+++.+
T Consensus 381 ~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 381 PDDVSALTECVDWVVE 396 (398)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 61
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.61 E-value=4.3e-14 Score=157.40 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 233 EIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 233 E~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
..++.+++++++|.+ ..++|+|||+||..++.+.. .+| -.|+++..+|.
T Consensus 58 ~~~l~~~la~~~g~~------------~~~~~~~gt~a~~~al~~l~----------~~g---------d~vi~~~~~~~ 106 (412)
T 2cb1_A 58 AKALEERLKALEGAL------------EAVVLASGQAATFAALLALL----------RPG---------DEVVAAKGLFG 106 (412)
T ss_dssp HHHHHHHHHHHHTCS------------EEEEESSHHHHHHHHHHTTC----------CTT---------CEEEEETTCCH
T ss_pred HHHHHHHHHHHhCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CEEEEeCCCch
Confidence 334556788888874 37899999999988877531 122 24777888999
Q ss_pred HHHHHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccc
Q psy11047 313 SVEKAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFY 388 (943)
Q Consensus 313 Sv~KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~ 388 (943)
++..+.. ..+.+++.++.| +++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~---------- 164 (412)
T 2cb1_A 107 QTIGLFGQVLSLMGVTVRYVDPE------PEAVREALSAK------TRAVFVETVANPALLVPDLEALAT---------- 164 (412)
T ss_dssp HHHHHHHHTTTTTTCEEEEECSS------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH----------
T ss_pred hHHHHHHHHHHHcCCEEEEECCC------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHH----------
Confidence 8877652 223467777764 88888888653 678888889999999999999999
Q ss_pred cccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 389 KMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 389 ~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+|+|++|+.+
T Consensus 165 ----------l~~~~~~-------~li~D~~~~~~ 182 (412)
T 2cb1_A 165 ----------LAEEAGV-------ALVVDNTFGAA 182 (412)
T ss_dssp ----------HHHHHTC-------EEEEECGGGTT
T ss_pred ----------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999865
No 62
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.60 E-value=2.5e-14 Score=156.23 Aligned_cols=142 Identities=11% Similarity=-0.011 Sum_probs=111.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|..++...++...+.+|+++++|.+.. .....++|+|||+||..++.+.. .+| -
T Consensus 74 y~~~~g~~~l~~~l~~~l~~~~g~~~~-------~~~~i~~~~g~~~a~~~~~~~l~----------~~g---------d 127 (407)
T 3nra_A 74 YTEYRGDLGIRDLLAPRLAAFTGAPVD-------ARDGLIITPGTQGALFLAVAATV----------ARG---------D 127 (407)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHTSCCC-------TTTSEEEESHHHHHHHHHHHTTC----------CTT---------C
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCcEEEeCCcHHHHHHHHHHhC----------CCC---------C
Confidence 444555678888999999999998521 00268999999999988765421 122 2
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEec------CCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---H
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIES------DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---Y 373 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~------D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L 373 (943)
.|+++.-+|.++..++...+.+++.++. ++++.+|+++|+++|+.. +.+|+.+...+.+|.+-| +
T Consensus 128 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l 201 (407)
T 3nra_A 128 KVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEI 201 (407)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHH
T ss_pred EEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHH
Confidence 4777888999999888654558888988 478899999999999763 456667777888999988 8
Q ss_pred HHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 374 CCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 374 ~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
++|++ +|++||+ |+++|.+|+++
T Consensus 202 ~~i~~--------------------~~~~~~~-------~li~Dea~~~~ 224 (407)
T 3nra_A 202 GQIAA--------------------LAARYGA-------TVIADQLYSRL 224 (407)
T ss_dssp HHHHH--------------------HHHHHTC-------EEEEECTTTTS
T ss_pred HHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 88888 9999999 99999999876
No 63
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.60 E-value=2.3e-14 Score=157.39 Aligned_cols=302 Identities=10% Similarity=0.004 Sum_probs=184.4
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.++...++-.++.+++++++|.++ ..+||+|||+|+..++.. +. +| + .|
T Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~~-----------~v~~~~sgt~a~~~~~~~-----~~------~g--------d-~v 77 (379)
T 3ke3_A 29 MSKAFQEVMNDLLSNLKTVYNAEA-----------AVIIPGSGTYGMEAVARQ-----LT------ID--------E-DC 77 (379)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSE-----------EEEEESCHHHHHHHHHHH-----HC------TT--------C-EE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC-----------EEEEcCChhHHHHHHHHh-----CC------CC--------C-eE
Confidence 367777888889999999999873 468999999998776522 11 22 1 35
Q ss_pred EecCCCchHHH--HHH-HHCC-ccEEEEecCCC---------CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc
Q psy11047 305 YCSDQAHSSVE--KAG-LIGL-VNMRYIESDDK---------LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD 371 (943)
Q Consensus 305 ~~S~~aHySv~--KAa-~LG~-~~v~~Vp~D~~---------grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID 371 (943)
++++.+|++.. ..+ ..|. ..++.++++.. +.+|+++|+++|+... +.+|+.+...+.+|.+.
T Consensus 78 i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~ 152 (379)
T 3ke3_A 78 LIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIIL 152 (379)
T ss_dssp EEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEEC
T ss_pred EEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeC
Confidence 55566777642 223 3463 46778876432 3689999999996531 55788888889999999
Q ss_pred c---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhH
Q psy11047 372 S---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILT 448 (943)
Q Consensus 372 p---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n 448 (943)
| +++|++ +|++||+ ++|+|++++|. . +
T Consensus 153 ~~~~l~~i~~--------------------~~~~~~~-------~li~D~~~~g~--~--~------------------- 182 (379)
T 3ke3_A 153 SEEYIKALSE--------------------AVHSVGG-------LLVIDCIASGC--V--W------------------- 182 (379)
T ss_dssp CHHHHHHHHH--------------------HHHHTTC-------EEEEECTTCTT--C--C-------------------
T ss_pred CHHHHHHHHH--------------------HHHHcCC-------EEEEEecccCC--c--c-------------------
Confidence 9 999999 9999999 99999998732 1 0
Q ss_pred HHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccCc-ch------hhhhcc--cCccccccCCCCcccccCc
Q psy11047 449 EKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNS-GA------LHRTFN--VEPLYLRHENSGLAIDYMH 519 (943)
Q Consensus 449 ~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~-~~------L~~af~--~~p~YL~~~~~g~~~d~~~ 519 (943)
.. ... ..+|.+++++|||++...+ .. +.+.+. ....|.. ++..
T Consensus 183 --------------~~-~~~-----~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~--------~~~~ 234 (379)
T 3ke3_A 183 --------------LD-MKE-----LGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSL--------DLKQ 234 (379)
T ss_dssp --------------CC-HHH-----HTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTT--------CHHH
T ss_pred --------------cc-ccc-----cCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceee--------cHHH
Confidence 11 111 1469999999999872211 11 111111 0011100 0000
Q ss_pred cc-----c-CCCCCcc---h-H---HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccc
Q psy11047 520 WQ-----I-PLSKRFR---A-L---KLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKL 586 (943)
Q Consensus 520 ~t-----i-e~SRrfr---A-L---klW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~ 586 (943)
|. . .++|.+. . . .+-.++..+...|+.+..++
T Consensus 235 ~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~----------------------------------- 279 (379)
T 3ke3_A 235 WLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDA----------------------------------- 279 (379)
T ss_dssp HHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH-----------------------------------
T ss_pred HHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHH-----------------------------------
Confidence 00 0 1222211 1 1 11122232322333333332
Q ss_pred cCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC--Ccc-EEEEEecCCChHHHHHHHHHhccCcEEEeecc--
Q psy11047 587 QTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR--HLG-MVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-- 661 (943)
Q Consensus 587 ~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~--~l~-iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-- 661 (943)
..++++++.+.|.+. +++++.++ ..+ ++.|...+. .....+.|.++|.+ +.+..
T Consensus 280 ----------------~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~L~~~Gi~-v~~g~~~ 338 (379)
T 3ke3_A 280 ----------------QWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTERD---DMHKGSAFAEAGLQ-IAAGVPL 338 (379)
T ss_dssp ----------------HHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSCH---HHHSSHHHHHTTCC-CEECCCC
T ss_pred ----------------HHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCCc---chHHHHHHHHCCeE-EeCCccc
Confidence 356788888888876 78877654 244 444554321 12235667777863 33321
Q ss_pred ----cCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q psy11047 662 ----LRIQGLGRAQNFTRTTNDDITRDWNEIRNTATEIL 696 (943)
Q Consensus 662 ----~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ll 696 (943)
..+...+|++++..+|++||+++++.|+++.+++.
T Consensus 339 ~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 339 KVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 11256899988888999999999999998877654
No 64
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.60 E-value=1.4e-14 Score=157.55 Aligned_cols=131 Identities=9% Similarity=-0.054 Sum_probs=100.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..++...++|. .+++++|.+ .+++|+|||+||..++.+.+ + .+ .-
T Consensus 32 ~~~~~~~~~l~~----~la~~~~~~------------~~i~~~sgt~al~~~l~~l~---~------~~---------gd 77 (373)
T 3frk_A 32 FILGDEDKKFEQ----EFADYCNVN------------YCIGCGNGLDALHLILKGYD---I------GF---------GD 77 (373)
T ss_dssp CSSSHHHHHHHH----HHHHHHTSS------------EEEEESCHHHHHHHHHHHTT---C------CT---------TC
T ss_pred ccCCchHHHHHH----HHHHHhCCC------------eEEEeCCHHHHHHHHHHHcC---C------CC---------cC
Confidence 445566666665 456777764 37999999999988877531 0 12 23
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
.|+++..+|.++..++...+.+++.++.+ +++.+|+++|+++|+++ +.+|+ .++.+|.+.|+++|.+
T Consensus 78 ~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~--- 145 (373)
T 3frk_A 78 EVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKR--- 145 (373)
T ss_dssp EEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHH---
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHH---
Confidence 57889999999998885433478888887 67899999999888653 45555 3457899999999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|+|++.+
T Consensus 146 -----------------l~~~~~~-------~li~D~a~~~g 163 (373)
T 3frk_A 146 -----------------IAKKYNL-------KLIEDAAQAHG 163 (373)
T ss_dssp -----------------HHHHHTC-------EEEEECTTCTT
T ss_pred -----------------HHHHcCC-------EEEEECCcccC
Confidence 9999999 99999999865
No 65
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.60 E-value=4e-14 Score=153.16 Aligned_cols=315 Identities=12% Similarity=0.055 Sum_probs=192.2
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhc
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQ 287 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~ 287 (943)
+.+.+...+... .+...+...++|. .+++++|.+ .+++|+|||+|+..++.+.+ +
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~~----~la~~~~~~------------~~~~~~~gt~a~~~~~~~~~---~---- 75 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFEK----RFAALHNAP------------HAIGVGTGTDALAMSFKMLN---I---- 75 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHHH----HHHHHTTCS------------EEEEESCHHHHHHHHHHHTT---C----
T ss_pred HHHHHHHHHHcC--CcccChhHHHHHH----HHHHHhCCC------------cEEEeCCHHHHHHHHHHHcC---C----
Confidence 445555554433 2444566665554 667788764 37899999999987776532 0
Q ss_pred ccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcc
Q psy11047 288 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAF 367 (943)
Q Consensus 288 ~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~t 367 (943)
.+ .-.|+++..+|.++..++...+.+++.++.++++.+|+++|+++++++ +.+|+ .++.+
T Consensus 76 --~~---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~~ 135 (374)
T 3uwc_A 76 --GA---------GDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDK------TKAIM---PVHYT 135 (374)
T ss_dssp --CT---------TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTT------EEEEC---CBCGG
T ss_pred --CC---------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCC------ceEEE---EeCCc
Confidence 12 235778899999999888654458899999888999999999888653 44554 55678
Q ss_pred cccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhh
Q psy11047 368 LVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENIL 447 (943)
Q Consensus 368 GaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~ 447 (943)
|.+.|+++|.+ +|++||+ ++++|++|+.+..+
T Consensus 136 G~~~~~~~i~~--------------------~~~~~~~-------~li~D~~~~~g~~~--------------------- 167 (374)
T 3uwc_A 136 GNIADMPALAK--------------------IAKKHNL-------HIVEDACQTILGRI--------------------- 167 (374)
T ss_dssp GCCCCHHHHHH--------------------HHHHTTC-------EEEEECTTCTTCEE---------------------
T ss_pred CCcCCHHHHHH--------------------HHHHcCC-------EEEEeCCCccCcee---------------------
Confidence 99999999999 9999999 99999999865111
Q ss_pred HHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCC--CccCc-cCcchhh-h--hcccCccccccCCCCcccccCccc
Q psy11047 448 TEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPS--SLLRV-KNSGALH-R--TFNVEPLYLRHENSGLAIDYMHWQ 521 (943)
Q Consensus 448 n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpH--K~L~v-r~~~~L~-~--af~~~p~YL~~~~~g~~~d~~~~t 521 (943)
..... + ..+|.+++++| |+++. .....+. . .+......+... +....+. .
T Consensus 168 --------------~~~~~-----~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~--~ 223 (374)
T 3uwc_A 168 --------------NDKFV-----G-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNH--GLINRDV--C 223 (374)
T ss_dssp --------------TTEET-----T-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBT--TEEETTE--E
T ss_pred --------------CCeec-----c-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhc--CccccCc--c
Confidence 00010 1 13589999977 99873 2222110 0 000000011110 0000000 0
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcH
Q psy11047 522 IPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKF 601 (943)
Q Consensus 522 ie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~ 601 (943)
...+-.++...+...+.....+++.+.+++
T Consensus 224 ~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~-------------------------------------------------- 253 (374)
T 3uwc_A 224 VEYGINCRMDTIQAVIANRLMNQLETITEK-------------------------------------------------- 253 (374)
T ss_dssp SSCCCBCBCCHHHHHHHHHHGGGHHHHHHH--------------------------------------------------
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 011112222233333433333444444444
Q ss_pred HHHHHHHHHHHHHhCCCC-eEEecCCC---ccEEEEEecCCChHHHHHHHHHhccCcEEEeecc---------cC-----
Q psy11047 602 QSVRLAQKFEALVLGDPR-FEIPAARH---LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS---------LR----- 663 (943)
Q Consensus 602 ~~~~LA~~l~~~L~~~p~-~eIl~~~~---l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~---------~~----- 663 (943)
..++++++.+.|.+.++ +++...+. .+.+.|.+...+ ...+.++|.++|.. +.+.. +.
T Consensus 254 -~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~gi~-v~~~~~~~~~~~~~~~~~~~~ 329 (374)
T 3uwc_A 254 -RRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKY--RDQLFQYLKDNGIE-VKIHYPIAMHLQPAAKSLGYQ 329 (374)
T ss_dssp -HHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEETT--HHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCC
T ss_pred -HHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcCC--HHHHHHHHHHCCCc-cccCCCCccccChhhhhcCCc
Confidence 35678888889988888 88864332 222233333222 46788888888853 32210 00
Q ss_pred ----------CCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 664 ----------IQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 664 ----------g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
....+|+++++.+|++||+++++.|+++.+
T Consensus 330 ~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 330 QGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp TTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHH
T ss_pred cCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 026899999999999999999999988754
No 66
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.60 E-value=9.9e-14 Score=152.83 Aligned_cols=326 Identities=8% Similarity=-0.088 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIR 284 (943)
Q Consensus 205 ~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~ 284 (943)
+.+. +.+...+......|...+...+++..+.+|+.+..|++... ...++|+|||+|+..++.+..
T Consensus 57 ~~v~-~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~--------~~v~~t~g~~~al~~~~~~l~----- 122 (406)
T 1xi9_A 57 EHMK-EAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP--------DDVRVTAAVTEALQLIFGALL----- 122 (406)
T ss_dssp HHHH-HHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--------GGEEEESHHHHHHHHHHHHHC-----
T ss_pred HHHH-HHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH--------HHEEEcCChHHHHHHHHHHhC-----
Confidence 4444 44444443322234444456889999999999998875321 368999999999988876531
Q ss_pred hhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEec
Q psy11047 285 KYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGL 362 (943)
Q Consensus 285 ~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTa 362 (943)
.+| -.|++++.+|.++..++...+.+++.++.+. .+.+|+++|++.|+.+ +.+|+.+.
T Consensus 123 -----~~g---------d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~ 182 (406)
T 1xi9_A 123 -----DPG---------DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVIN 182 (406)
T ss_dssp -----CTT---------CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEES
T ss_pred -----CCC---------CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEEC
Confidence 122 2477788899999888864445788888763 5679999999998653 56667777
Q ss_pred CCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeee
Q psy11047 363 ALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVI 439 (943)
Q Consensus 363 GTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcF 439 (943)
..+.+|.+-| +++|.+ +|++||+ |+++|.+|+++ .+.
T Consensus 183 p~nptG~~~~~~~l~~i~~--------------------~a~~~~~-------~li~De~~~~~-~~~------------ 222 (406)
T 1xi9_A 183 PNNPTGALYDKKTLEEILN--------------------IAGEYEI-------PVISDEIYDLM-TYE------------ 222 (406)
T ss_dssp SCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------CEEEECTTTTC-BSS------------
T ss_pred CCCCCCCCcCHHHHHHHHH--------------------HHHHcCC-------EEEEEcCcccc-ccC------------
Confidence 7888998754 888888 9999999 99999999876 320
Q ss_pred eecchhhhHHHHHHHhhccCcccccchhhhhcCCCCe-eEEEEcCCCccCcc---CcchhhhhcccCc----cccccCCC
Q psy11047 440 RLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRA-QNFTIVPSSLLRVK---NSGALHRTFNVEP----LYLRHENS 511 (943)
Q Consensus 440 R~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~A-DSItiDpHK~L~vr---~~~~L~~af~~~p----~YL~~~~~ 511 (943)
+. ...... +. ... |-++.++||+++.. -...+. ...+ ..+..-.
T Consensus 223 -------------------~~--~~~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~l~~~l~- 274 (406)
T 1xi9_A 223 -------------------GE--HISPGS-LT--KDVPVIVMNGLSKVYFATGWRLGYMYF---VDPENKLSEVREAID- 274 (406)
T ss_dssp -------------------SC--CCCHHH-HC--SSSCEEEEEESTTTTCCGGGCCEEEEE---ECTTCTTHHHHHHHH-
T ss_pred -------------------CC--CCCHHH-cC--CCceEEEEeccccccCCCccEEEEEEE---ecCchhHHHHHHHHH-
Confidence 00 001111 21 234 67888999998722 111110 0111 1110000
Q ss_pred CcccccCccccCCCCCcchHHHHHHHHHH--HHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCC
Q psy11047 512 GLAIDYMHWQIPLSKRFRALKLWFVIRNF--GIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTN 589 (943)
Q Consensus 512 g~~~d~~~~tie~SRrfrALklW~tLr~~--G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~ 589 (943)
....++ .+ ...+..++....+ +.+.+.+..++
T Consensus 275 ----~~~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~-------------------------------------- 308 (406)
T 1xi9_A 275 ----RLARIR--LC--PNTPAQFAAIAGLTGPMDYLKEYMKK-------------------------------------- 308 (406)
T ss_dssp ----HHHHHT--CC--SCSHHHHHHHHHHHSCCHHHHHHHHH--------------------------------------
T ss_pred ----HHHHhh--cC--CCHHHHHHHHHHHhCCcHHHHHHHHH--------------------------------------
Confidence 000000 00 1122222222222 11222222222
Q ss_pred CcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEEE-EecCC-ChHHHHHHHHHh-ccCcEEEeecc-c--C
Q psy11047 590 FPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVI-RLLGE-NILTEKLLKRLN-SKGRLHCVPAS-L--R 663 (943)
Q Consensus 590 ~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~F-r~~g~-n~l~~~Ll~~L~-~~G~~~~s~t~-~--~ 663 (943)
..++++++.+.|.+.|++++.. +..++++| ++... +....++.++|. ++|. ++.+.. . .
T Consensus 309 -------------~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi-~v~~g~~f~~~ 373 (406)
T 1xi9_A 309 -------------LKERRDYIYKRLNEIPGISTTK-PQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHV-LFVHGSGFGEY 373 (406)
T ss_dssp -------------HHHHHHHHHHHHHTSTTEECCC-CCBSSEECCEECSCSCSSHHHHHHHHHHHHCE-ECEEGGGGCGG
T ss_pred -------------HHHHHHHHHHHHHhCCCCeeec-CCeeEEEEEecCccCCCCHHHHHHHHHHhCCE-EEeCchhcCCC
Confidence 2355677888888888988764 44455554 66521 112567888876 6775 444322 2 2
Q ss_pred CCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 664 IQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 664 g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
+..++|+++. +++++|+++++.|.++.+++
T Consensus 374 ~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 374 GAGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp GTTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 3578999765 88999999999998876654
No 67
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.58 E-value=1.6e-13 Score=149.51 Aligned_cols=156 Identities=12% Similarity=0.001 Sum_probs=114.2
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCc-EEEcCChHHHHHHHHHHHHHHHHHhh
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGG-GVLQTTASESTLICLLAGRTEAIRKY 286 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~-GvfTsGGTeANL~AL~aAR~~~l~~~ 286 (943)
+.+.+...++.....|...+...+++..+.+|+.+.+|++.. ... .++|+|||+|+..++.+..
T Consensus 44 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~--------~~~~v~~~~g~~~a~~~~~~~~~------- 108 (389)
T 1gd9_A 44 IKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEAD--------PKTEIMVLLGANQAFLMGLSAFL------- 108 (389)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC--------TTTSEEEESSTTHHHHHHHTTTC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC--------CCCeEEEcCChHHHHHHHHHHhC-------
Confidence 445555555433333444445788999999999999896422 136 8999999999987765421
Q ss_pred cccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 287 QQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 287 ~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
.+| -.|++++.+|+++..++...+.+++.+|.+. .+.+|+++|+++|+.+ +.+|+.+..+
T Consensus 109 ---~~g---------d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~ 170 (389)
T 1gd9_A 109 ---KDG---------EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPC 170 (389)
T ss_dssp ---CTT---------CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSC
T ss_pred ---CCC---------CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCC
Confidence 122 2467788899998888754334788888874 4679999999988653 5566777778
Q ss_pred Ccccccc---cHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVD---SYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaID---pL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|.+- ++++|.+ +|++||+ |+++|.+|+++
T Consensus 171 nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 205 (389)
T 1gd9_A 171 NPTGAVLTKKDLEEIAD--------------------FVVEHDL-------IVISDEVYEHF 205 (389)
T ss_dssp TTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred CCCCcCCCHHHHHHHHH--------------------HHHHcCC-------EEEEehhhhhc
Confidence 8899885 4888888 9999999 99999999876
No 68
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.58 E-value=1.3e-13 Score=152.24 Aligned_cols=319 Identities=9% Similarity=-0.058 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIR 284 (943)
Q Consensus 205 ~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~ 284 (943)
+.+. +.+ ..+......|...+...+++..+.+|+.+..|++... ...++|+|||+|+..++.+..
T Consensus 59 ~~v~-~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~--------~~v~~~~g~t~a~~~~~~~~~----- 123 (409)
T 2gb3_A 59 EVFF-ERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP--------ENVLVTNGGSEAILFSFAVIA----- 123 (409)
T ss_dssp THHH-HHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG--------GGEEEESHHHHHHHHHHHHHC-----
T ss_pred HHHH-HHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH--------HHEEEeCCHHHHHHHHHHHhC-----
Confidence 3444 444 5554333344444557889999999999988865321 368999999999988877531
Q ss_pred hhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEec
Q psy11047 285 KYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGL 362 (943)
Q Consensus 285 ~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTa 362 (943)
.+| -.|++++.+|.++..++...+.+++.++.+. .+.+ +++|+++|+++ +.+|+.+.
T Consensus 124 -----~~g---------d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~ 182 (409)
T 2gb3_A 124 -----NPG---------DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSN 182 (409)
T ss_dssp -----CTT---------CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEES
T ss_pred -----CCC---------CEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECC
Confidence 122 2477788899999888854334788888874 3445 78888777542 56777777
Q ss_pred CCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeee
Q psy11047 363 ALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVI 439 (943)
Q Consensus 363 GTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcF 439 (943)
.++.+|.+ +++++|.+ +|++||+ |+++|.+|+++ .+.
T Consensus 183 p~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~Dea~~~~-~~~------------ 222 (409)
T 2gb3_A 183 PCNPTGVVYGKDEMRYLVE--------------------IAERHGL-------FLIVDEVYSEI-VFR------------ 222 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC-BCS------------
T ss_pred CCCCCCCCcCHHHHHHHHH--------------------HHHHcCC-------EEEEECccccc-ccC------------
Confidence 77888987 45888888 9999999 99999999876 320
Q ss_pred eecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCc-cccccCCCCccc
Q psy11047 440 RLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEP-LYLRHENSGLAI 515 (943)
Q Consensus 440 R~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p-~YL~~~~~g~~~ 515 (943)
|. ..+ .+.++...|.+..++||+++... ...+ ... ..+..-..
T Consensus 223 -------------------~~-~~~----~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~l~~~l~~---- 269 (409)
T 2gb3_A 223 -------------------GE-FAS----ALSIESDKVVVIDSVSKKFSACGARVGCLI-----TRNEELISHAMK---- 269 (409)
T ss_dssp -------------------SC-CCC----GGGSCCTTEEEEEESTTTTTCGGGCCEEEE-----CSCHHHHHHHHH----
T ss_pred -------------------CC-CCC----ccccCCCCEEEEecchhccCCccceEEEEE-----ECcHHHHHHHHH----
Confidence 00 011 12344457999999999997321 1111 011 11100000
Q ss_pred ccCccccCCCCCcchHHHHHHHHHH--HHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCccc
Q psy11047 516 DYMHWQIPLSKRFRALKLWFVIRNF--GIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNF 593 (943)
Q Consensus 516 d~~~~tie~SRrfrALklW~tLr~~--G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~ 593 (943)
-...++ ....+..++....+ +..++.+..++
T Consensus 270 ~~~~~~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~------------------------------------------ 302 (409)
T 2gb3_A 270 LAQGRL-----APPLLEQIGSVGLLNLDDSFFDFVRET------------------------------------------ 302 (409)
T ss_dssp HHHHSC-----CCCHHHHHHHHHHHTCCHHHHHHHHHH------------------------------------------
T ss_pred HHhccC-----CCCHHHHHHHHHHHhccHHHHHHHHHH------------------------------------------
Confidence 000011 11122223333333 22223222222
Q ss_pred ccccCCcHHHHHHHHHHHHHHhCCCCeEE-ecCCCccE-EEEEecCCChHHHHHHHHHhcc------CcEEEeecc-c--
Q psy11047 594 ILSYFPKFQSVRLAQKFEALVLGDPRFEI-PAARHLGM-VVIRLLGENILTEKLLKRLNSK------GRLHCVPAS-L-- 662 (943)
Q Consensus 594 ~~~~~p~~~~~~LA~~l~~~L~~~p~~eI-l~~~~l~i-V~Fr~~g~n~l~~~Ll~~L~~~------G~~~~s~t~-~-- 662 (943)
..++++++.+.|++. ++++ .. +..++ +.+++.+.+ ..++.++|.++ |. ++.+.. .
T Consensus 303 ---------~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~--~~~l~~~l~~~~~~~~~gi-~v~~g~~f~~ 368 (409)
T 2gb3_A 303 ---------YRERVETVLKKLEEH-GLKRFTK-PSGAFYITAELPVED--AEEFARWMLTDFNMDGETT-MVAPLRGFYL 368 (409)
T ss_dssp ---------HHHHHHHHHHHHHHT-TCCCBCC-CSBSSEEEEECSSSC--HHHHHHHHHHSCCBTTEEE-ECEEGGGGCS
T ss_pred ---------HHHHHHHHHHHHHHc-CceeeeC-CCeeEEEEEEeCCCC--HHHHHHHHHhccccccCcE-EEeCchHhCC
Confidence 234566677777666 6777 44 44444 444665332 46788888766 64 454422 2
Q ss_pred ---CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 663 ---RIQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 663 ---~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
.+..++|+++. +++++|+++++.|+++.+++
T Consensus 369 ~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 369 TPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp STTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 23679999666 79999999999998887654
No 69
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.58 E-value=8.8e-14 Score=152.48 Aligned_cols=337 Identities=14% Similarity=0.023 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHhcc---CccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCL---GFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTE 281 (943)
Q Consensus 205 ~silgd~L~~alN~n---~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~ 281 (943)
+..+.+.+...+... .. |...+...+++..+.+|+.+..|++... ...++|+|||+|+..++.+..
T Consensus 51 ~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~--------~~v~~t~g~t~a~~~~~~~~~-- 119 (407)
T 2zc0_A 51 RAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP--------ENIVITIGGTGALDLLGRVLI-- 119 (407)
T ss_dssp HHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG--------GGEEEESHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc--------ceEEEecCHHHHHHHHHHHhc--
Confidence 344445555554432 12 4444456889999999998888864221 368999999999988877642
Q ss_pred HHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEE-EE
Q psy11047 282 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFI-FS 360 (943)
Q Consensus 282 ~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~V-Va 360 (943)
.+| -.|++..-+|++...++...+.+++.+|.++++ +|+++|+++|+.....+..+.+| +.
T Consensus 120 --------~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~ 181 (407)
T 2zc0_A 120 --------DPG---------DVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTI 181 (407)
T ss_dssp --------CTT---------CEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred --------CCC---------CEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEEC
Confidence 122 236677888999888876444578888887766 99999999998422122225555 45
Q ss_pred ecCCCcccccccHH---HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccccee
Q psy11047 361 GLALPAFLVVDSYC---CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 437 (943)
Q Consensus 361 TaGTT~tGaIDpL~---eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~V 437 (943)
+...+.+|.+.|++ +|++ +|++||+ |+++|.+|+++ .+.
T Consensus 182 ~~~~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~-~~~---------- 223 (407)
T 2zc0_A 182 PTGQNPMGVTMSMERRKALLE--------------------IASKYDL-------LIIEDTAYNFM-RYE---------- 223 (407)
T ss_dssp CSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTS-BSS----------
T ss_pred CCCCCCCCcCCCHHHHHHHHH--------------------HHHHcCC-------EEEEECCCccc-ccC----------
Confidence 56678899998876 7777 9999999 99999999876 320
Q ss_pred eeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCc--cCcchhhhhcccCccccccCCCCccc
Q psy11047 438 VIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRV--KNSGALHRTFNVEPLYLRHENSGLAI 515 (943)
Q Consensus 438 cFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~v--r~~~~L~~af~~~p~YL~~~~~g~~~ 515 (943)
|. ..+.... +. ....+-+..++||+++. |-...+ ..+..+..-...
T Consensus 224 ---------------------~~-~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~~-----~~~~~~~~~~~~--- 271 (407)
T 2zc0_A 224 ---------------------GG-DIVPLKA-LD-NEGRVIVAGTLSKVLGTGFRIGWII-----AEGEILKKVLMQ--- 271 (407)
T ss_dssp ---------------------CS-SCCCGGG-GC-SSCCEEEEEESTTTTCTTSCCEEEE-----CCHHHHHHHHHH---
T ss_pred ---------------------CC-CCCChhh-cC-CCCCEEEEcccccccCCCcceEEEe-----cCHHHHHHHHHH---
Confidence 00 0001111 11 11223456678999981 111110 011111000000
Q ss_pred ccCccccCCCCCcchHHHHHHHHHHHHHHHH-HHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccc
Q psy11047 516 DYMHWQIPLSKRFRALKLWFVIRNFGIKGLQ-KHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFI 594 (943)
Q Consensus 516 d~~~~tie~SRrfrALklW~tLr~~G~~Gl~-~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~ 594 (943)
...++. ....+..++....+....+. +.+++. ++.
T Consensus 272 -~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------~~~---------------- 307 (407)
T 2zc0_A 272 -KQPIDF----CAPAISQYIALEYLKRGYFEKYHLEGA-----------------------LLG---------------- 307 (407)
T ss_dssp -HTTTTS----SSCHHHHHHHHHHHHTTHHHHHTTTTH-----------------------HHH----------------
T ss_pred -HHhhcC----CCCHHHHHHHHHHHHcCCchHHHHHHH-----------------------HHH----------------
Confidence 000111 11222222222222110111 111110 000
Q ss_pred cccCCcHHHHHHHHHHHHHHhC-CCCeEEecCCCccEEEEEecC-CChHHHHHHHHHhcc-CcEEEeecc-c----CCCc
Q psy11047 595 LSYFPKFQSVRLAQKFEALVLG-DPRFEIPAARHLGMVVIRLLG-ENILTEKLLKRLNSK-GRLHCVPAS-L----RIQG 666 (943)
Q Consensus 595 ~~~~p~~~~~~LA~~l~~~L~~-~p~~eIl~~~~l~iV~Fr~~g-~n~l~~~Ll~~L~~~-G~~~~s~t~-~----~g~~ 666 (943)
..++++++.+.|++ .|++++..+...+.+.|++.. .+ ..++.++|.++ |. ++.+.. . .+..
T Consensus 308 --------~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~~gi-~v~~g~~~~~~~~~~~ 376 (407)
T 2zc0_A 308 --------YKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGAD--GISFANELMEREGV-VVVPGKPFYTDESGKN 376 (407)
T ss_dssp --------HHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCC--HHHHHHHHHHHTCE-ECBCSGGGCSSSCCTT
T ss_pred --------HHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCC--HHHHHHHHHHhCCe-EEECchhccCCCCCCC
Confidence 23456677777765 577777655556677888853 22 46788888888 75 444322 1 1457
Q ss_pred EEEEeecCCCCHHHHHHHHHHHHHHHHHHH
Q psy11047 667 LGRAQNFTRTTNDDITRDWNEIRNTATEIL 696 (943)
Q Consensus 667 ~lR~v~~~~tt~edId~ll~~I~~~~~~ll 696 (943)
++|++++.. ++++|+++++.|.++.++++
T Consensus 377 ~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 377 AIRLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp EEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 999976655 89999999999998876653
No 70
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.57 E-value=4.9e-13 Score=145.64 Aligned_cols=298 Identities=16% Similarity=0.069 Sum_probs=182.6
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.++...++| +.+++++|.+ ..++|+|||+|+..++.+.+ + .+| -.|
T Consensus 37 ~~~~~~~l~----~~la~~~~~~------------~~~~~~~gt~al~~~~~~~~---~------~~g---------d~V 82 (393)
T 1mdo_A 37 TGPKNQELE----AAFCRLTGNQ------------YAVAVSSATAGMHIALMALG---I------GEG---------DEV 82 (393)
T ss_dssp SSHHHHHHH----HHHHHHHCCS------------EEEEESCHHHHHHHHHHHTT---C------CTT---------CEE
T ss_pred CChHHHHHH----HHHHHHhCCC------------cEEEecChHHHHHHHHHHcC---C------CCC---------CEE
Confidence 345555555 4567777764 37999999999988877531 0 122 347
Q ss_pred EecCCCchHHHHHHHHCCccEEEEecCCC-CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 305 YCSDQAHSSVEKAGLIGLVNMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 305 ~~S~~aHySv~KAa~LG~~~v~~Vp~D~~-grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++..+|.+...++...+.+++.++++++ +.+|+++|+++|+++ +.+|+.+ +.+|.+.|+++|.+
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~----- 148 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYA----- 148 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHH-----
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHH-----
Confidence 78899999998888654458889998764 689999999998653 4555544 46899999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ ++++|++|+.+..+ ..
T Consensus 149 ---------------l~~~~~~-------~li~D~a~~~g~~~-----------------------------------~~ 171 (393)
T 1mdo_A 149 ---------------LGERYGI-------PVIEDAAHATGTSY-----------------------------------KG 171 (393)
T ss_dssp ---------------HHHHHTC-------CBCEECTTCTTCEE-----------------------------------TT
T ss_pred ---------------HHHHcCC-------eEEEECccccCCeE-----------------------------------CC
Confidence 9999999 99999999854121 00
Q ss_pred cchhhhhcCCCCeeEEEEcCC--CccC-------c-cCcchhhhhcccCccccccCCCCcccc----cCcccc----CCC
Q psy11047 464 VPASLRIQGLGRAQNFTIVPS--SLLR-------V-KNSGALHRTFNVEPLYLRHENSGLAID----YMHWQI----PLS 525 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpH--K~L~-------v-r~~~~L~~af~~~p~YL~~~~~g~~~d----~~~~ti----e~S 525 (943)
.. + +. .|.+++++| |++. + +++... +.+.. +..........+ ...+.+ .+.
T Consensus 172 ~~----~-~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~-~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 240 (393)
T 1mdo_A 172 RH----I-GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFA-DKLRS---LKFHGLGVDAWDRQSGGRAPQAEVLAPGY 240 (393)
T ss_dssp EE----T-TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHH-HHHHH---HTBTTEECC-----------CCEESSCCC
T ss_pred ee----c-CC--CCeEEEeCCCCCccccccceEEEeCCHHHH-HHHHH---HHhcCCcccchhhhcccccccccccccCc
Confidence 00 1 11 689999999 9987 1 222211 11110 000000000000 000111 111
Q ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHH
Q psy11047 526 -KRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSV 604 (943)
Q Consensus 526 -RrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~ 604 (943)
-+..++...+.+. ..+++.+.+++ ..
T Consensus 241 ~~~~~~~~~a~~~~--~l~~~~~~~~~---------------------------------------------------~~ 267 (393)
T 1mdo_A 241 KYNLPDLNAAIALA--QLQKLDALNAR---------------------------------------------------RA 267 (393)
T ss_dssp BCCCCHHHHHHHHH--HHHTHHHHHHH---------------------------------------------------HH
T ss_pred cCCCCHHHHHHHHH--HHHHHHHHHHH---------------------------------------------------HH
Confidence 1223332222222 23344443333 34
Q ss_pred HHHHHHHHHHhCCCCeEEecCC------CccEEEEEec----CCChHHHHHHHHHhccCcEEEeecc-------------
Q psy11047 605 RLAQKFEALVLGDPRFEIPAAR------HLGMVVIRLL----GENILTEKLLKRLNSKGRLHCVPAS------------- 661 (943)
Q Consensus 605 ~LA~~l~~~L~~~p~~eIl~~~------~l~iV~Fr~~----g~n~l~~~Ll~~L~~~G~~~~s~t~------------- 661 (943)
++++++.+.|.+.+ +++...+ ...++.|+++ +.+ ..++.++|.++|.. +.+..
T Consensus 268 ~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~~~~ 343 (393)
T 1mdo_A 268 AIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGIT--RDALMASLKTKGIG-TGLHFRAAHTQKYYRERF 343 (393)
T ss_dssp HHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSSC--HHHHHHHHHHTTBC-CBCCCCCGGGSHHHHHHS
T ss_pred HHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccccC--HHHHHHHHHhCCCC-cccccCccccChhhhccC
Confidence 57888888898887 8876432 2346788876 232 56788888888853 32210
Q ss_pred ----cC-----CCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 662 ----LR-----IQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 662 ----~~-----g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
+. ...++|+.+++.+|++||+++++.|+++.+..
T Consensus 344 ~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 344 PTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp TTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred CccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 00 13479999999999999999999998875543
No 71
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.56 E-value=3.1e-15 Score=169.49 Aligned_cols=288 Identities=12% Similarity=-0.024 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+++++ +|.++ ..++|+|||+||..++.++. .+| ..|+++..+
T Consensus 57 ~~~~~~~~~la~-~g~~~-----------~v~~~~G~t~a~~~~~~a~~----------~~g---------d~Vlv~~~~ 105 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDYD-----------GYFLVNGTTSGILSVIQSFS----------QKK---------GDILMARNV 105 (446)
T ss_dssp SHHHHHHHHHCS-CTTEE-----------EEEESSHHHHHHHHHHHTTT----------TSS---------SCEEECTTC
T ss_pred hHHHHHHHHHHh-cCCCc-----------eEEEeCCHHHHHHHHHHHhc----------CCC---------CEEEEecCc
Confidence 344567788999 98863 46899999999998887641 122 247788999
Q ss_pred chHHHHHHHHCCccEEEEec--CCC----CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccc
Q psy11047 311 HSSVEKAGLIGLVNMRYIES--DDK----LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKG 384 (943)
Q Consensus 311 HySv~KAa~LG~~~v~~Vp~--D~~----grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d 384 (943)
|.|+..++.+.+..++.+++ +++ +.+|+++| +.. .+.+|+.+. .|.+|.+.|+++|.+
T Consensus 106 h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~------~~~~v~~~~-~n~~G~~~~l~~I~~------ 169 (446)
T 2x3l_A 106 HKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NND------GHKLVVLTY-PNYYGETFNVEEVIK------ 169 (446)
T ss_dssp CHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHH------
T ss_pred cHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCC------CceEEEEEC-CCCCeEecCHHHHHH------
Confidence 99999998653446778877 665 67899887 222 256777777 666999999999999
Q ss_pred cccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccccc
Q psy11047 385 LGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCV 464 (943)
Q Consensus 385 ~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p 464 (943)
+|++||+ |+|+|+||++...|. +. +
T Consensus 170 --------------l~~~~~~-------~livDea~~~~~~f~-------------------------------~~---~ 194 (446)
T 2x3l_A 170 --------------SLHQLNI-------PVLIDEAHGAHFGLQ-------------------------------GF---P 194 (446)
T ss_dssp --------------HHHHTTC-------CEEEECTTCTTTTST-------------------------------TS---C
T ss_pred --------------HHHhcCC-------eEEEcchhhhhhccC-------------------------------CC---C
Confidence 9999999 999999998741220 00 0
Q ss_pred chhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcch-HHHHHHHHHHHH
Q psy11047 465 PASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRA-LKLWFVIRNFGI 542 (943)
Q Consensus 465 ~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrA-LklW~tLr~~G~ 542 (943)
... . . ..+|.++.++||+++ ....+.+. ....++.... ..........++....+ ..++.+++.+..
T Consensus 195 -~~~-~-~-~g~Di~~~S~~K~l~~~~g~g~l~----~~~~~i~~~~---~~~~~~~~~~~s~~~~~~aal~~a~~~l~~ 263 (446)
T 2x3l_A 195 -DST-L-N-YQADYVVQSFHKTLPALTMGSVLY----IHKNAPYREN---IIEYLSYFQTSSPSYLIMASLESAAQFYKT 263 (446)
T ss_dssp -CCG-G-G-GTCSEEEECHHHHSSSCTTCEEEE----EETTCTTHHH---HHHHHHHHSCSSCCHHHHHHHHHHHHHHHH
T ss_pred -CCh-H-H-cCCCEEEECCccccccccccEEEE----EcCCcCCHHH---HHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 000 0 0 137999999999776 21211110 0011110000 00000000011111111 112222222221
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEE
Q psy11047 543 KGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEI 622 (943)
Q Consensus 543 ~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eI 622 (943)
.|..+..++ ..++++++.+. ++++
T Consensus 264 ~g~~~~~~~---------------------------------------------------~~~l~~~l~~~-----g~~~ 287 (446)
T 2x3l_A 264 YDSTLFFAK---------------------------------------------------RAQLIECLENK-----GFEM 287 (446)
T ss_dssp CCCHHHHHH---------------------------------------------------HHHHHHHHHHH-----TCEE
T ss_pred hCHHHHHHH---------------------------------------------------HHHHHHHHHHc-----CCEE
Confidence 111111111 24456666554 6777
Q ss_pred ecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 623 PAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 623 l~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+.+...+.+.|++.+.+ ...+.+.|.++|. .+.. .+...+|++++..+|++++ ++++.|+++.+.
T Consensus 288 ~~~~~~~~l~i~~~~~~--~~~l~~~L~~~GI-~v~~---~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 288 LQVDDPLKLLIKYEGFT--GHDIQNWFMNAHI-YLEL---ADDYQALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp EECSSTTEEEEECTTSC--HHHHHHHHHHTTE-EESE---ECSSCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred CcCCCCeEEEEEeCCcC--HHHHHHHHHHCCC-EEEe---cCCCEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 76544446778876443 4678888888875 4431 2456899998888899999 999999887543
No 72
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.56 E-value=7e-13 Score=146.20 Aligned_cols=129 Identities=9% Similarity=-0.028 Sum_probs=98.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
+|...++|. .+++++|.+ ..++|+|||+|+..++.+.+ . .+| -.|+
T Consensus 31 g~~~~~l~~----~la~~~~~~------------~v~~~~ggt~al~~~~~~l~---~------~~g---------d~Vl 76 (394)
T 1o69_A 31 GEFVNRFEQ----SVKDYSKSE------------NALALNSATAALHLALRVAG---V------KQD---------DIVL 76 (394)
T ss_dssp THHHHHHHH----HHHHHHCCS------------EEEEESCHHHHHHHHHHHTT---C------CTT---------CEEE
T ss_pred ChHHHHHHH----HHHHHhCCC------------cEEEeCCHHHHHHHHHHHcC---C------CCC---------CEEE
Confidence 355555554 556667762 47999999999988877531 0 122 2477
Q ss_pred ecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccc
Q psy11047 306 CSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGL 385 (943)
Q Consensus 306 ~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~ 385 (943)
++..+|.+...++...+..++.+++++++.+|+++|+++|++.. + .+.+|+.+. .+|...|+++|.+
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~--~-~~~~v~~~~---~~G~~~~l~~i~~------- 143 (394)
T 1o69_A 77 ASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE--K-KPKALILTH---LYGNAAKMDEIVE------- 143 (394)
T ss_dssp EESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS--S-CCCEEEEEC---GGGCCCCHHHHHH-------
T ss_pred ECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc--C-CceEEEEEC---CCCChhhHHHHHH-------
Confidence 88999999988886544588899998889999999999998631 0 144555553 6899999999999
Q ss_pred ccccccccCchHHHHHHcCCCCCccchhhhHHhhhc
Q psy11047 386 GFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 421 (943)
Q Consensus 386 ~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~G 421 (943)
+|+++|+ ++++|+||+
T Consensus 144 -------------l~~~~~~-------~li~Dea~~ 159 (394)
T 1o69_A 144 -------------ICKENDI-------VLIEDAAEA 159 (394)
T ss_dssp -------------HHHHTTC-------EEEEECTTC
T ss_pred -------------HHHHcCC-------EEEEECcCc
Confidence 9999999 999999998
No 73
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.56 E-value=1e-12 Score=143.76 Aligned_cols=299 Identities=11% Similarity=0.040 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+.+++++|.+ . .+++++||+|+..++.+.. .+| -.|+++...
T Consensus 90 ~~~~~l~~~la~~~g~~-~-----------~i~~~sGs~a~~~~~~~~~----------~~g---------d~v~~~~~~ 138 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-D-----------AILYSSCFDANGGLFETLL----------GAE---------DAIISDALN 138 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-E-----------EEEESCHHHHHHTTHHHHC----------CTT---------CEEEEETTC
T ss_pred HHHHHHHHHHHHHhCCC-c-----------EEEeCChHHHHHHHHHHHc----------CCC---------CEEEEcchh
Confidence 44456677788888886 2 4677888999987765431 122 257778889
Q ss_pred chHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 311 HSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 311 HySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
|.++..++...+..++.++. +|+++|++.|+....+|..+.+|+.+...+.+|.+.|+++|.+
T Consensus 139 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~------------ 201 (401)
T 1fc4_A 139 HASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCD------------ 201 (401)
T ss_dssp CHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHH------------
T ss_pred HHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHH------------
Confidence 99988887654456777763 5799999999864433334678888888889999999999999
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhc-CCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhh
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVL-GDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLR 469 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~G-G~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~ 469 (943)
+|++||+ ++++|.+|+ ++ .. + +|. ... .
T Consensus 202 --------l~~~~~~-------~li~De~~~~g~-~~--~----------------------------~g~----~~~-~ 230 (401)
T 1fc4_A 202 --------LADKYDA-------LVMVDDSHAVGF-VG--E----------------------------NGR----GSH-E 230 (401)
T ss_dssp --------HHHHTTE-------EEEEECTTTTTT-SS--T----------------------------TSC----CHH-H
T ss_pred --------HHHHcCC-------EEEEECcccccc-cC--C----------------------------CCC----ccH-H
Confidence 9999999 999999996 54 11 0 000 000 0
Q ss_pred hcCC-CCeeEEEEcCCCcc-CccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHH-HHH
Q psy11047 470 IQGL-GRAQNFTIVPSSLL-RVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIK-GLQ 546 (943)
Q Consensus 470 l~Gi-e~ADSItiDpHK~L-~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~-Gl~ 546 (943)
+.++ ..+|.++.++||++ +.. .+.+. .++..+..-... . ..+.... ....+.++.....+... ...
T Consensus 231 ~~~~~~~~di~~~s~sK~~~~~~-gG~~~----~~~~~~~~l~~~---~-~~~~~~~--~~~~~~~~a~~~~l~~~~~~~ 299 (401)
T 1fc4_A 231 YCDVMGRVDIITGTLGKALGGAS-GGYTA----ARKEVVEWLRQR---S-RPYLFSN--SLAPAIVAASIKVLEMVEAGS 299 (401)
T ss_dssp HTTCTTCCSEEEEESSSTTCSSS-CEEEE----ECHHHHHHHHHH---C-HHHHHSC--CCCHHHHHHHHHHHHHHHTCH
T ss_pred HcCCCcCCcEEEecchhhccCCC-CEEEE----cCHHHHHHHHHh---C-cCceeCC--CCCHHHHHHHHHHHHHHhcCH
Confidence 1122 24699999999999 422 12110 011111000000 0 0010001 11122222222222110 011
Q ss_pred HHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC
Q psy11047 547 KHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR 626 (943)
Q Consensus 547 ~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~ 626 (943)
+..++ ..++++++.+.|++. ++++. +.
T Consensus 300 ~~~~~---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~-~~ 326 (401)
T 1fc4_A 300 ELRDR---------------------------------------------------LWANARQFREQMSAA-GFTLA-GA 326 (401)
T ss_dssp HHHHH---------------------------------------------------HHHHHHHHHHHHHHT-TCCBC-CS
T ss_pred HHHHH---------------------------------------------------HHHHHHHHHHHHHHc-CCccc-CC
Confidence 11111 245567777777766 67766 56
Q ss_pred CccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 627 HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 627 ~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
..+++.|++.+ ......+.++|.++|. ++.+... .+..++|++++..+++++++++++.|+++.++
T Consensus 327 ~~~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 327 DHAIIPVMLGD-AVVAQKFARELQKEGI-YVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp SSSEEEEEEEC-HHHHHHHHHHHHHTTE-ECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCC-hHHHHHHHHHHHHCCc-EEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 78888888863 1235678888888875 4443322 13468999998889999999999999887553
No 74
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.55 E-value=4.9e-13 Score=144.94 Aligned_cols=156 Identities=8% Similarity=-0.015 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
++.+. +.+...+......|.. ...+++..+.+++++++|.+.. ....++|+|||+|+..++.+..
T Consensus 47 ~~~v~-~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~--------~~~v~~~~g~~~a~~~~~~~~~---- 111 (391)
T 4dq6_A 47 APCII-DSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIK--------SEWLIYSPGVIPAISLLINELT---- 111 (391)
T ss_dssp CHHHH-HHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCC--------GGGEEEESCHHHHHHHHHHHHS----
T ss_pred CHHHH-HHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCc--------HHHeEEcCChHHHHHHHHHHhC----
Confidence 34444 4444444433333332 3478889999999999995422 1268999999999988876531
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC----CCCCcCHHHHHHHHHHhhccCCCcEEEE
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD----DKLSLRGDKLIEAIERDKKKHLIPFFIF 359 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D----~~grmD~daLe~aI~~d~~kG~~P~~VV 359 (943)
.+| -.|+++..+|.+...++..-+.+++.+|.+ .++.+|+++|+++|+. +.+|+
T Consensus 112 ------~~g---------d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~ 169 (391)
T 4dq6_A 112 ------KAN---------DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFI 169 (391)
T ss_dssp ------CTT---------CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEE
T ss_pred ------CCC---------CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEE
Confidence 122 247778899999988886444578888876 3446999999998865 45677
Q ss_pred EecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 360 SGLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 360 aTaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+...+.+|.+ +++++|.+ +|++||+ ++++|.+|+++
T Consensus 170 i~~p~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 209 (391)
T 4dq6_A 170 LCNPHNPVGRVWTKDELKKLGD--------------------ICLKHNV-------KIISDEIHSDI 209 (391)
T ss_dssp EESSBTTTTBCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred EECCCCCCCcCcCHHHHHHHHH--------------------HHHHcCC-------EEEeecccccc
Confidence 77778889999 67888888 9999999 99999999876
No 75
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.55 E-value=1.8e-12 Score=142.00 Aligned_cols=137 Identities=12% Similarity=0.037 Sum_probs=101.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..++...++|. .+++++|.+ ..+++++||+||..++.+++... ..++ .+.-
T Consensus 30 ~~~~~~~~~l~~----~la~~~~~~------------~~i~~~sGt~a~~~al~~~~~~~-------~~~~-----~~g~ 81 (390)
T 3b8x_A 30 FTMGEYVKQYET----QFAKTFGSK------------YAVMVSSGSTANLLMIAALFFTK-------KPRL-----KKGD 81 (390)
T ss_dssp CSSCHHHHHHHH----HHHHHHTCS------------EEEEESCHHHHHHHHHHHTTSSS-------SCSC-----CTTC
T ss_pred CCCChHHHHHHH----HHHHHHCCC------------cEEEECCHHHHHHHHHHHHHhhh-------hcCC-----CCcC
Confidence 344566666665 557777764 36899999999998887653100 0011 1223
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCCC-CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~-grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
.|+++..+|.++..++...+..++.++++.+ +.+|+++|+++|+++ +.+|+.+ +.+|...|+++|.+
T Consensus 82 ~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~--- 149 (390)
T 3b8x_A 82 EIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINK--- 149 (390)
T ss_dssp EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHH---
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHH---
Confidence 5788899999999988654457888998865 999999999998653 4556654 35788899999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++|+|+|++.+
T Consensus 150 -----------------l~~~~~~-------~li~D~a~~~g 167 (390)
T 3b8x_A 150 -----------------IIGGRDI-------ILLEDNCESMG 167 (390)
T ss_dssp -----------------HHTTSCC-------EEEEECTTCTT
T ss_pred -----------------HHHHcCC-------EEEEECcCccc
Confidence 9999999 99999999844
No 76
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.54 E-value=1.1e-13 Score=148.63 Aligned_cols=301 Identities=11% Similarity=0.007 Sum_probs=182.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCCh-HHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTA-SESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGG-TeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
++....+...+.+++++++|.++. ...+||+|+ |+|+..++.+.- .+| .+..+|
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~---------~~v~~~~g~gt~al~~~~~~l~----------~~~------~~g~~v 97 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPND---------YQILFLQGGASLQFTMLPMNLL----------TKG------TIGNYV 97 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT---------EEEEEESSHHHHHHHHHHHHHC----------CTT------CEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC---------ceEEEECCcchHHHHHHHHHhc----------CCC------CcccEE
Confidence 666777778899999999999632 257899998 999877765421 111 012357
Q ss_pred EecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHH-HHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 305 YCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIE-AIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 305 ~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~-aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
+++..+|++...+...| +++.++++. +|.+|+++|++ +|+.+ +.+|+.+..++.+|.+-| +|
T Consensus 98 i~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~--~i------ 161 (360)
T 1w23_A 98 LTGSWSEKALKEAKLLG--ETHIAASTKANSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ--NF------ 161 (360)
T ss_dssp ECSHHHHHHHHHHHTTS--EEEEEEECGGGTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS--SC------
T ss_pred EecchhHHHHHHHHHhC--CeEEeecccccCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc--cc------
Confidence 78888888854443456 888999875 77899999887 76432 678888888889999855 33
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccc
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLH 462 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~ 462 (943)
+++||+ |+++|++++.+ .. .
T Consensus 162 -----------------~~~~~~-------~li~D~a~~~~-~~-----------------------------------~ 181 (360)
T 1w23_A 162 -----------------PEINHA-------PLIADMSSDIL-SR-----------------------------------P 181 (360)
T ss_dssp -----------------CCCCSS-------CEEEECTTTTT-SS-----------------------------------C
T ss_pred -----------------cccCCc-------eEEEechhhcC-CC-----------------------------------C
Confidence 336999 99999999765 21 0
Q ss_pred ccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCcccccc--CCCCcccccCc---ccc-CCCCC-cchHHHHH
Q psy11047 463 CVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRH--ENSGLAIDYMH---WQI-PLSKR-FRALKLWF 535 (943)
Q Consensus 463 ~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~--~~~g~~~d~~~---~ti-e~SRr-frALklW~ 535 (943)
. . +. ..|.++.++||+++...-+.+. ..+..+.. ...+...++.. .+. .++-. +....+..
T Consensus 182 ~-~----~~---~~di~~~s~sK~~~~~G~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (360)
T 1w23_A 182 L-K----VN---QFGMIYAGAQKNLGPSGVTVVI----VKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRN 249 (360)
T ss_dssp C-C----GG---GCSEEEEETTTTTSCTTCEEEE----EEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHH
T ss_pred c-C----cc---cCCEEEEEcccccCCCCcEEEE----EcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHH
Confidence 1 1 11 1278999999998833211110 00001000 00000000000 000 01111 11122233
Q ss_pred HHHHHHHH-HHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHH
Q psy11047 536 VIRNFGIK-GLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV 614 (943)
Q Consensus 536 tLr~~G~~-Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L 614 (943)
+++.+... ++.+..++ ..++++++.+.|
T Consensus 250 al~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L 278 (360)
T 1w23_A 250 VLDWIKDLGGAEAIAKQ---------------------------------------------------NEEKAKIIYDTI 278 (360)
T ss_dssp HHHHHHHTTHHHHHHHH---------------------------------------------------HHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHH---------------------------------------------------HHHHHHHHHHHH
Confidence 33333222 33333333 345778888888
Q ss_pred hCCCCe-EEec-C-CCcc-EEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHH
Q psy11047 615 LGDPRF-EIPA-A-RHLG-MVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRN 690 (943)
Q Consensus 615 ~~~p~~-eIl~-~-~~l~-iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~ 690 (943)
++.+++ .... + ...+ ++.|++++. ....++.++|.++|.. +.+.. ....++|++++..+++++++++++.|++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~-~~~~~-~~~~~iRis~~~~~~~~~i~~~~~~l~~ 355 (360)
T 1w23_A 279 DESNGFYVGHAEKGSRSLMNVTFNLRNE-ELNQQFLAKAKEQGFV-GLNGH-RSVGGCRASIYNAVPIDACIALRELMIQ 355 (360)
T ss_dssp HTTTTSSEESSCGGGBCSSEEEEECSSH-HHHHHHHHHHHHTTEE-SCBCC-TTTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHccCcccccCCchhccCcEEEEEcCCC-ccHHHHHHHHHHCCee-eecCC-CCCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 888765 5542 2 2345 888988642 2346788888888853 43321 1246899999999999999999999987
Q ss_pred HHH
Q psy11047 691 TAT 693 (943)
Q Consensus 691 ~~~ 693 (943)
+.+
T Consensus 356 ~~~ 358 (360)
T 1w23_A 356 FKE 358 (360)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 77
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.54 E-value=5.3e-13 Score=148.18 Aligned_cols=158 Identities=8% Similarity=-0.081 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
+|.++ +.+...+......|... ..+++..+.+|+++.+|++... ...+||+|||+||..++.+++
T Consensus 76 ~~~v~-~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~--------~~v~~~~g~~ea~~~a~~~~~---- 140 (421)
T 3l8a_A 76 VPEIK-EAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVK--------EDILFIDGVVPAISIALQAFS---- 140 (421)
T ss_dssp CHHHH-HHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG--------GGEEEESCHHHHHHHHHHHHS----
T ss_pred CHHHH-HHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH--------HHEEEcCCHHHHHHHHHHHhc----
Confidence 44444 44444444333333332 3788899999999999965321 368999999999998887642
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC---CCCCcCHHHHHHHHHHhhccCCCcEEEEE
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFIFS 360 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D---~~grmD~daLe~aI~~d~~kG~~P~~VVa 360 (943)
.+| -.|++...+|+++..++...+.+++.+|.+ ..+.+|+++|+++|+.. .+.+|+.
T Consensus 141 ------~~g---------d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil 200 (421)
T 3l8a_A 141 ------EKG---------DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLL 200 (421)
T ss_dssp ------CTE---------EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEE
T ss_pred ------CCC---------CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEE
Confidence 122 246777889999888876444577888864 34478999999999842 1567777
Q ss_pred ecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 361 GLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 361 TaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+...+.+|.+ +++++|++ +|++||+ ++++|.+|+++
T Consensus 201 ~~p~nptG~~~~~~~l~~l~~--------------------l~~~~~~-------~li~De~~~~~ 239 (421)
T 3l8a_A 201 CSPHNPGGRVWDNDDLIKIAE--------------------LCKKHGV-------ILVSDEIHQDL 239 (421)
T ss_dssp ESSBTTTTBCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred CCCCCCCCCcCCHHHHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 7788889988 77899998 9999999 99999999876
No 78
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.54 E-value=1e-12 Score=145.30 Aligned_cols=146 Identities=8% Similarity=-0.017 Sum_probs=105.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|.......+++..+.+|+.+..|++-. ....++|+|||+|+..++.+... ..+| .+.
T Consensus 78 y~~~~g~~~lr~~la~~~~~~~g~~~~--------~~~i~~t~g~t~al~~~~~~l~~--------~~~g-------d~~ 134 (437)
T 3g0t_A 78 YPNLDGLPELKQEASRFAKLFVNIDIP--------ARACVPTVGSMQGCFVSFLVANR--------THKN-------REY 134 (437)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCC--------GGGEEEESHHHHHHHHHHHHHTT--------SCTT-------CSC
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCC--------cccEEEeCCHHHHHHHHHHHHhc--------CCCC-------Ccc
Confidence 333334578899999999988887532 13689999999999888765320 0122 101
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhh
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGT 378 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~ 378 (943)
.|+++.-+|.++..++..-+.+++.++.++ .+.+|+++|+++|+.. .+.+|+.+...+.+|.+-| +++|++
T Consensus 135 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~ 209 (437)
T 3g0t_A 135 GTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGE 209 (437)
T ss_dssp CEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHH
Confidence 366778899999888853334788888864 4479999999999432 1556666777888998876 666777
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|++|+.+
T Consensus 210 --------------------~a~~~~~-------~li~De~~~~~ 227 (437)
T 3g0t_A 210 --------------------LATKHDV-------IVIEDLAYFGM 227 (437)
T ss_dssp --------------------HHHHTTC-------EEEEECTTTTC
T ss_pred --------------------HHHHCCc-------EEEEEcchhhc
Confidence 9999999 99999999875
No 79
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.54 E-value=1.9e-12 Score=139.77 Aligned_cols=286 Identities=9% Similarity=-0.032 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
..+.+++++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|+++.-+|.+
T Consensus 70 ~~lr~~la~~~~~~~~----------~v~~~~g~t~a~~~~~~~~~----------~~g---------d~vl~~~~~~~~ 120 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEE----------ELIFTAGVDELIELLTRVLL----------DTT---------TNTVMATPTFVQ 120 (363)
T ss_dssp HHHHHHHHHHHTCCGG----------GEEEESSHHHHHHHHHHHHC----------STT---------CEEEEEESSCHH
T ss_pred HHHHHHHHHHhCCChh----------hEEEeCCHHHHHHHHHHHHc----------cCC---------CEEEEcCCChHH
Confidence 3566778888887654 68999999999988776531 122 246677789999
Q ss_pred HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccccc
Q psy11047 314 VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 393 (943)
Q Consensus 314 v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~ 393 (943)
+..++...+.+++.++.+.++.+|+++|+++++.+ +.+|+.+...+.+|.+-|++++.+
T Consensus 121 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~--------------- 179 (363)
T 3ffh_A 121 YRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQA--------------- 179 (363)
T ss_dssp HHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH---------------
T ss_pred HHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHH---------------
Confidence 88888543448899999888999999999998653 667777888899999999999988
Q ss_pred CchHHHHHHc--CCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhc
Q psy11047 394 TNFPNFILSY--FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQ 471 (943)
Q Consensus 394 RrfR~iar~~--Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~ 471 (943)
+++.+ |+ ++++|++|+++ .+. . ..+. ....
T Consensus 180 -----l~~~~~~~~-------~li~De~~~~~-~~~--~-------------------------------~~~~-~~~~- 211 (363)
T 3ffh_A 180 -----FLDRVPSDV-------LVVLDEAYIEY-VTP--Q-------------------------------PEKH-EKLV- 211 (363)
T ss_dssp -----HHTTSCTTS-------EEEEECTTGGG-CSS--C-------------------------------CCCC-GGGG-
T ss_pred -----HHHhCCCCc-------EEEEeCchHhh-cCc--c-------------------------------ccCH-HHHh-
Confidence 87777 99 99999999865 210 0 0000 0001
Q ss_pred CCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHHHH
Q psy11047 472 GLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGLQK 547 (943)
Q Consensus 472 Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl~~ 547 (943)
+...-+-+..+++|+++... ...+ .++..+..-... ...| ....+..++....+.. +.+.+
T Consensus 212 ~~~~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~~~~l~~~----~~~~------~~~~~~~~~~~~~l~~~~~~~~ 276 (363)
T 3ffh_A 212 RTYKNLIITRTFSKIYGLASARVGYGI-----ADKEIIRQLNIV----RPPF------NTTSIGQKLAIEAIKDQAFIGE 276 (363)
T ss_dssp GTCTTEEEEEESSSTTCCSSCCCEEEE-----ECHHHHHHHHHT----CCSC------CCBHHHHHHHHHHHHCHHHHHH
T ss_pred hcCCCEEEEeechhhhcCchhceeeee-----cCHHHHHHHHHh----CCCC------CCCHHHHHHHHHHhcCHHHHHH
Confidence 11123456778899987322 1111 011111000000 0001 1223333434433321 11122
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
..++ ..++++++.+.|.+.+++++. ++.
T Consensus 277 ~~~~---------------------------------------------------~~~~~~~l~~~l~~~~g~~~~-~~~ 304 (363)
T 3ffh_A 277 CRTS---------------------------------------------------NANGIKQYEAFAKRFEKVKLY-PAN 304 (363)
T ss_dssp HHHH---------------------------------------------------HHHHHHHHHHHHHHCTTCEEC-CCC
T ss_pred HHHH---------------------------------------------------HHHHHHHHHHHHhhCCCceEC-CCC
Confidence 1111 245677788888887888876 456
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeecc-cCCCcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-LRIQGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-~~g~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
.+.+.+++.. ...++.++|.++|. ++.+.. .....++|++++ +++|++++++.|+++
T Consensus 305 ~~~~~~~~~~---~~~~~~~~l~~~gi-~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 305 GNFVLIDLGI---EAGTIFSYLEKNGY-ITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp SSEEEEECSS---CHHHHHHHHHHTTE-ECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CeEEEEECCC---CHHHHHHHHHHCCe-EEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 7788888864 25678888888875 444432 223679999765 899999999998864
No 80
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.54 E-value=5e-13 Score=146.61 Aligned_cols=156 Identities=8% Similarity=-0.092 Sum_probs=115.8
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhc
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQ 287 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~ 287 (943)
+.+.+...+......|...+...+++..+.+|+.+..|++-. ....++|+|||+|+..++.+..
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~--------~~~v~~~~g~t~al~~~~~~l~-------- 122 (389)
T 1o4s_A 59 VVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDIS--------PDQVVVTNGAKQALFNAFMALL-------- 122 (389)
T ss_dssp HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCC--------GGGEEEESHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC--------HHHEEEecCHHHHHHHHHHHhC--------
Confidence 445555555433334444456788999999999998887421 0368999999999988876531
Q ss_pred ccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCC
Q psy11047 288 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALP 365 (943)
Q Consensus 288 ~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT 365 (943)
.+| -.|++++.+|.++..++...+.+++.+|.+. .+.+|+++|+++|+.+ +.+|+.+...+
T Consensus 123 --~~g---------d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~n 185 (389)
T 1o4s_A 123 --DPG---------DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNN 185 (389)
T ss_dssp --CTT---------CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCT
T ss_pred --CCC---------CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCC
Confidence 122 2467778899998888865445788898874 5689999999988653 55667777788
Q ss_pred ccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 366 AFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 366 ~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+|.+-| +++|.+ +|++||+ ++++|.+|+.+
T Consensus 186 ptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~Dea~~~~ 219 (389)
T 1o4s_A 186 PTGVVYRREFLEGLVR--------------------LAKKRNF-------YIISDEVYDSL 219 (389)
T ss_dssp TTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTS
T ss_pred CCCCCCCHHHHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 8999855 888888 9999999 99999999876
No 81
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.53 E-value=1.2e-12 Score=141.46 Aligned_cols=284 Identities=9% Similarity=0.005 Sum_probs=177.1
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.++. ...+||+|||+|+..++.+.. .+| -.|+++..+|.++
T Consensus 71 ~l~~~la~~~g~~~~---------~~i~~~~g~t~a~~~~~~~~~----------~~g---------d~Vl~~~~~~~~~ 122 (367)
T 3euc_A 71 ALRAKLKEVMQVPAG---------MEVLLGNGSDEIISMLALAAA----------RPG---------AKVMAPVPGFVMY 122 (367)
T ss_dssp HHHHHHHHHHTCCTT---------CEEEEEEHHHHHHHHHHHHTC----------CTT---------CEEEEEESCSCCS
T ss_pred HHHHHHHHHhCCCCc---------ceEEEcCCHHHHHHHHHHHHc----------CCC---------CEEEEcCCCHHHH
Confidence 456677888898422 368999999999987766421 122 2366677788887
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc---cHHHhhhhcccccccccccc
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD---SYCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID---pL~eIa~~~~~~d~~~~~i~ 391 (943)
..++...+.+++.++.+.++.+|+++|+++|+... +.+|+.+...+.+|.+- ++++|.+
T Consensus 123 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~------------- 184 (367)
T 3euc_A 123 AMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVR------------- 184 (367)
T ss_dssp CHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHH-------------
T ss_pred HHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHH-------------
Confidence 77775444588999999899999999999998731 55677778888899884 4677777
Q ss_pred ccCchHHHHHHc--CCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhh
Q psy11047 392 LQTNFPNFILSY--FPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLR 469 (943)
Q Consensus 392 L~RrfR~iar~~--Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~ 469 (943)
+|++| |+ ++++|.+|+.+ ... + ..+ .
T Consensus 185 -------~~~~~~~~~-------~li~De~~~~~-~~~-------------------------------~--~~~----~ 212 (367)
T 3euc_A 185 -------AAQGSVCRS-------LVVVDEAYQPF-AQE-------------------------------S--WMS----R 212 (367)
T ss_dssp -------HTBTTSCBC-------EEEEECTTCCS-SSC-------------------------------C--SGG----G
T ss_pred -------hhhhcCCCc-------EEEEeCcchhh-ccc-------------------------------c--hHH----H
Confidence 89999 99 99999999865 210 0 111 1
Q ss_pred hcCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHHH
Q psy11047 470 IQGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGLQ 546 (943)
Q Consensus 470 l~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl~ 546 (943)
+.. ...+-+..++||++. .+-...+ ..+..+..-... ...|+ ...+..+.....+-. +.+.
T Consensus 213 ~~~-~~~~i~~~s~sK~~~~G~r~G~~~-----~~~~~~~~~~~~----~~~~~------~~~~~~~a~~~~l~~~~~~~ 276 (367)
T 3euc_A 213 LTD-FGNLLVMRTVSKLGLAGIRLGYVA-----GDPQWLEQLDKV----RPPYN------VNVLTEATALFALEHVAVLD 276 (367)
T ss_dssp GGT-CTTEEEEEECCCTTSCSCCEEEEE-----ECHHHHHHHGGG----CCSSC------CCHHHHHHHHHHHTTHHHHH
T ss_pred Hhh-CCCEEEEecchhhcccccCceeee-----eCHHHHHHHHHh----CCCCC------CCHHHHHHHHHHhcCHHHHH
Confidence 111 123566778999832 1111111 011111000000 00011 122222222222211 1222
Q ss_pred HHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCC
Q psy11047 547 KHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAAR 626 (943)
Q Consensus 547 ~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~ 626 (943)
+..++ ..++++++.+.|++.|++++ .++
T Consensus 277 ~~~~~---------------------------------------------------~~~~~~~l~~~l~~~~g~~~-~~~ 304 (367)
T 3euc_A 277 EQAAQ---------------------------------------------------LRAERSRVAEGMAAHGGVTV-FPS 304 (367)
T ss_dssp HHHHH---------------------------------------------------HHHHHHHHHHHHHTSTTCEE-CCC
T ss_pred HHHHH---------------------------------------------------HHHHHHHHHHHHHhCCCcEE-CCC
Confidence 22222 24567788888888899985 456
Q ss_pred CccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc---CCCcEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy11047 627 HLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL---RIQGLGRAQNFTRTTNDDITRDWNEIRNTA 692 (943)
Q Consensus 627 ~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~---~g~~~lR~v~~~~tt~edId~ll~~I~~~~ 692 (943)
..+.+.+++. + ...+.+.|.++|.+ +.+... ....++|++++ +++|++++++.|+++.
T Consensus 305 ~~~~~~~~~~--~--~~~l~~~l~~~gi~-v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 305 AANFLLARVP--D--AAQTFDRLLARKVL-IKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp SSSEEEEECS--C--HHHHHHHHHTTTEE-CEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECC--C--HHHHHHHHHHCCeE-EEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 6777788875 2 56788888888864 443221 23579999765 8999999999998763
No 82
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.53 E-value=4.1e-12 Score=141.21 Aligned_cols=311 Identities=14% Similarity=0.063 Sum_probs=189.1
Q ss_pred HHHHHHHHHhccCccccC-ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhh
Q psy11047 208 LGDMLSDAINCLGFTWAS-SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKY 286 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~-SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~ 286 (943)
+.+.+...+... .|.. ++...+++. .+++++|.+ ..++|+|||+|+..++.+.+
T Consensus 34 ~~~a~~~~~~~~--~y~~~~~~~~~l~~----~la~~~~~~------------~v~~~~ggt~al~~~l~~l~------- 88 (424)
T 2po3_A 34 LYERLDRALDSQ--WLSNGGPLVREFEE----RVAGLAGVR------------HAVATCNATAGLQLLAHAAG------- 88 (424)
T ss_dssp HHHHHHHHHHHT--CCSSSCHHHHHHHH----HHHHHHTSS------------EEEEESCHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHHhcC--CcccCCHHHHHHHH----HHHHHhCCC------------eEEEeCCHHHHHHHHHHHcC-------
Confidence 344455555432 2333 455555555 556667653 47999999999988877531
Q ss_pred cccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCC
Q psy11047 287 QQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALP 365 (943)
Q Consensus 287 ~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT 365 (943)
+| -.|++++.+|.+...++...+..++.++++. ++.+|+++|+++|+.+ +.+|+.+ .
T Consensus 89 ----~g---------d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~ 146 (424)
T 2po3_A 89 ----LT---------GEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPR------TSAVVGV---H 146 (424)
T ss_dssp ----CC---------SEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTT------EEEEEEE---C
T ss_pred ----CC---------CEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcC------CcEEEEE---C
Confidence 12 2477888999999888865445888899875 7889999999888643 4555554 3
Q ss_pred cccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhc-CCCccccccccccceeeeeecch
Q psy11047 366 AFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL-GDPRFEIPAARHLGMVVIRLLGE 444 (943)
Q Consensus 366 ~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~G-G~~afeLp~~~~Lg~VcFR~~~~ 444 (943)
.+|.+.++++|.+ +|++||+ |+++|++|+ |. .+.
T Consensus 147 ~tG~~~~l~~i~~--------------------la~~~~~-------~li~Dea~~~g~-~~~----------------- 181 (424)
T 2po3_A 147 LWGRPCAADQLRK--------------------VADEHGL-------RLYFDAAHALGC-AVD----------------- 181 (424)
T ss_dssp GGGCCCCHHHHHH--------------------HHHHTTC-------EEEEECTTCTTC-EET-----------------
T ss_pred CCCCcCCHHHHHH--------------------HHHHcCC-------EEEEECccccCC-eEC-----------------
Confidence 6889999999999 9999999 999999998 44 220
Q ss_pred hhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCc--------cCcchhhhhcccCccccccCCCCcccc
Q psy11047 445 NILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRV--------KNSGALHRTFNVEPLYLRHENSGLAID 516 (943)
Q Consensus 445 ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~v--------r~~~~L~~af~~~p~YL~~~~~g~~~d 516 (943)
+ .. +.....+...+++.||++.. +++..+ ..+.. +....... .+.
T Consensus 182 --------------~----~~----~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~-~~l~~---~~~~~~~~-~~~ 234 (424)
T 2po3_A 182 --------------G----RP----AGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLA-ARIRA---LHNFGFDL-PGG 234 (424)
T ss_dssp --------------T----EE----TTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHH-HHHHH---HHBTTTTC-TTC
T ss_pred --------------C----ee----cccccCEEEEeCCCCCCccCCCCeEEEeCCHHHH-HHHHH---HHhcCccc-ccc
Confidence 0 00 11111234445555598872 212211 11110 11100000 001
Q ss_pred cCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccc
Q psy11047 517 YMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILS 596 (943)
Q Consensus 517 ~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~ 596 (943)
. .......++..+..++.+.. .+++.+..++
T Consensus 235 ~--~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~--------------------------------------------- 265 (424)
T 2po3_A 235 S--PAGGTNAKMSEAAAAMGLTS--LDAFPEVIDR--------------------------------------------- 265 (424)
T ss_dssp C--TTCCCBCCCCHHHHHHHHHH--HHHHHHHHHH---------------------------------------------
T ss_pred c--cccCcCCCcCHHHHHHHHHH--HHHHHHHHHH---------------------------------------------
Confidence 0 01112224445555544432 2344443333
Q ss_pred cCCcHHHHHHHHHHHHHHhCCCCeEEecCCC-----ccEEEEEec----CCChHHHHHHHHHhccCcEEEeec-c--c--
Q psy11047 597 YFPKFQSVRLAQKFEALVLGDPRFEIPAARH-----LGMVVIRLL----GENILTEKLLKRLNSKGRLHCVPA-S--L-- 662 (943)
Q Consensus 597 ~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~-----l~iV~Fr~~----g~n~l~~~Ll~~L~~~G~~~~s~t-~--~-- 662 (943)
..++++++.+.|.+.|++++..++. ..++.|.++ +.+ ...+.+.|.++|.. +.+. . .
T Consensus 266 ------~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~l~~~L~~~gI~-v~~~~~~~~~~ 336 (424)
T 2po3_A 266 ------NRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIH--RDLVMEVLKAEGVH-TRAYFSPGCHE 336 (424)
T ss_dssp ------HHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSC--HHHHHHHHHHTTEE-CBCTTCSCGGG
T ss_pred ------HHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhh--HHHHHHHHHHCCCc-eecccCCcccc
Confidence 3467788888999889999876332 256667775 222 46788888888753 4321 0 0
Q ss_pred ----CC-------------CcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 663 ----RI-------------QGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 663 ----~g-------------~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
.+ ...+|+.++..++++||+++++.|+++.+..
T Consensus 337 ~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 337 LEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp STTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 00 1137777889999999999999999887654
No 83
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.53 E-value=6.2e-13 Score=146.62 Aligned_cols=304 Identities=13% Similarity=0.043 Sum_probs=183.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..++...+++ +.+++++|.+ ..++++|||+|+..++.+.+ + .+| -
T Consensus 59 y~~~~~~~~l~----~~la~~~~~~------------~~v~~~~Gt~a~~~~l~~~~---~------~~g---------d 104 (399)
T 2oga_A 59 YLLGPELEGFE----AEFAAYCETD------------HAVGVNSGMDALQLALRGLG---I------GPG---------D 104 (399)
T ss_dssp CSSSHHHHHHH----HHHHHHTTSS------------EEEEESCHHHHHHHHHHHTT---C------CTT---------C
T ss_pred CCCchhHHHHH----HHHHHHHCCC------------eEEEecCHHHHHHHHHHHhC---C------CCc---------C
Confidence 33445555554 5667788764 36899999999988876532 0 122 2
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
.|+++..+|.++..++...+.+++.++.++ ++.+|+++|+++|+.+ +.+|+. ++.+|.+.|+++|.+
T Consensus 105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~n~tG~~~~l~~i~~--- 172 (399)
T 2oga_A 105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPR------TRALLP---VHLYGHPADMDALRE--- 172 (399)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTT------EEEECC---BCGGGCCCCHHHHHH---
T ss_pred EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCC------CeEEEE---eCCcCCccCHHHHHH---
Confidence 477788899998888855445888899876 5899999999998653 444543 467899999999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcc
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRL 461 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~ 461 (943)
+|+++|+ |+++|++|+.+..+
T Consensus 173 -----------------l~~~~~~-------~li~Dea~~~g~~~----------------------------------- 193 (399)
T 2oga_A 173 -----------------LADRHGL-------HIVEDAAQAHGARY----------------------------------- 193 (399)
T ss_dssp -----------------HHHHHTC-------EECEECTTCTTCEE-----------------------------------
T ss_pred -----------------HHHHcCC-------EEEEECcccccCcc-----------------------------------
Confidence 9999999 99999999754111
Q ss_pred cccchhhhhcCCCCeeEEEEcCC--CccCcc-Ccchh-hh--hcccCccccccCCCCcccccCccccCCCCCcchHHHHH
Q psy11047 462 HCVPASLRIQGLGRAQNFTIVPS--SLLRVK-NSGAL-HR--TFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWF 535 (943)
Q Consensus 462 ~~p~~r~~l~Gie~ADSItiDpH--K~L~vr-~~~~L-~~--af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~ 535 (943)
.... + + ..+|.+++++| |+++.. ....+ .. .+......+... |....+.......+.+...+.+|+
T Consensus 194 ~~~~----~-~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~--g~~~~~~~~~~g~~~~~~~~~~a~ 265 (399)
T 2oga_A 194 RGRR----I-G-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNY--GSRQKYSHETKGTNSRLDEMQAAV 265 (399)
T ss_dssp TTEE----T-T-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBT--TCSSTTCCCSCCCBCCCCHHHHHH
T ss_pred CCee----c-c-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhc--CccccccccccccCCCcCHHHHHH
Confidence 0000 1 1 12477888875 998842 11111 00 000000000000 110111111112222345555555
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHh
Q psy11047 536 VIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 615 (943)
Q Consensus 536 tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~ 615 (943)
.+..+ +.+.+..++ ..++++++.+.|.
T Consensus 266 ~~~~l--~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~ 292 (399)
T 2oga_A 266 LRIRL--AHLDSWNGR---------------------------------------------------RSALAAEYLSGLA 292 (399)
T ss_dssp HHHHH--HTHHHHHHH---------------------------------------------------HHHHHHHHHHHTT
T ss_pred HHHHH--HHHHHHHHH---------------------------------------------------HHHHHHHHHHHhc
Confidence 44322 222222222 3467888889999
Q ss_pred CCCCeEEecCCC-cc-E-EEEEecCCChHHHHHHHHHhccCcEEEeecc--cC--------C-------------CcEEE
Q psy11047 616 GDPRFEIPAARH-LG-M-VVIRLLGENILTEKLLKRLNSKGRLHCVPAS--LR--------I-------------QGLGR 669 (943)
Q Consensus 616 ~~p~~eIl~~~~-l~-i-V~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~--~~--------g-------------~~~lR 669 (943)
++|++++...+. .+ + +.|.+...+ ..++.+.|.++|........ .. + ..++|
T Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lR 370 (399)
T 2oga_A 293 GLPGIGLPVTAPDTDPVWHLFTVRTER--RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLS 370 (399)
T ss_dssp TCTTCBCCCCCTTEECCCSSEEEECSS--HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEE
T ss_pred cCCCccccCCCCCCcceeEEEEEECCC--HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEE
Confidence 888888764332 22 2 235554332 46788888888864322110 00 0 25899
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 670 AQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 670 ~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+++++.+|++||+++++.|+++.++
T Consensus 371 i~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 371 LPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp ECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887543
No 84
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.53 E-value=9.3e-13 Score=144.21 Aligned_cols=299 Identities=13% Similarity=0.027 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+..++.+++++++|.+ ..++|+|||+|+..++.+.. .+| -.|+++..
T Consensus 87 ~~~~~~l~~~la~~~g~~------------~v~~~~ggt~a~~~~~~~~~----------~~g---------d~V~~~~p 135 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKE------------AAILFSTGFQSNLGPLSCLM----------GRN---------DYILLDER 135 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS------------EEEEESSHHHHHHHHHHHSS----------CTT---------CEEEEETT
T ss_pred cHHHHHHHHHHHHHhCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CEEEECCc
Confidence 456667888999999863 47999999999988877531 122 34778899
Q ss_pred CchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccc
Q psy11047 310 AHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYK 389 (943)
Q Consensus 310 aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~ 389 (943)
+|.+...++.+.+.+++.++. +|+++|++.++.... + .+.+|+.+...+.+|.+.|+++|.+
T Consensus 136 ~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~-~-~~~~v~~~~~~nptG~~~~~~~l~~----------- 197 (398)
T 3a2b_A 136 DHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE-D-SAKLICTDGIFSMEGDIVNLPELTS----------- 197 (398)
T ss_dssp CCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS-S-SCEEEEEESBCTTTCCBCCHHHHHH-----------
T ss_pred cCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc-C-CceEEEEeCCCCCCCCccCHHHHHH-----------
Confidence 999999988654557777876 689999999976421 1 3667777777778999999999999
Q ss_pred ccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhh
Q psy11047 390 MKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLR 469 (943)
Q Consensus 390 i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~ 469 (943)
+|++||+ |+++|.+|+.+ .+. . .-.....
T Consensus 198 ---------~~~~~~~-------~li~De~~~~~-~~~-~--------------------------------~~~~~~~- 226 (398)
T 3a2b_A 198 ---------IANEFDA-------AVMVDDAHSLG-VIG-H--------------------------------KGAGTAS- 226 (398)
T ss_dssp ---------HHHHHTC-------EEEEECTTTTT-TSS-G--------------------------------GGCCHHH-
T ss_pred ---------HHHHcCc-------EEEEECCCccc-ccC-C--------------------------------CCCchHh-
Confidence 9999999 99999999755 220 0 0000101
Q ss_pred hcCC-CCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCC-cchHHHHHHHHHHHHHHHHH
Q psy11047 470 IQGL-GRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIRNFGIKGLQK 547 (943)
Q Consensus 470 l~Gi-e~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr~~G~~Gl~~ 547 (943)
..++ +++|.++.++||+++... +.+. ..+..+..-... ...+...++-. .....+...++.+ +.+.+
T Consensus 227 ~~~~~~~~di~~~s~sK~~~~~G-G~~~----~~~~~~~~l~~~----~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~ 295 (398)
T 3a2b_A 227 HFGLNDDVDLIMGTFSKSLASLG-GFVA----GDADVIDFLKHN----ARSVMFSASMTPASVASTLKALEII--QNEPE 295 (398)
T ss_dssp HHTCGGGCSEEEEESSSTTCSSC-EEEE----ECHHHHHHHHHH----CHHHHSSBCCCHHHHHHHHHHHHHH--HHCTH
T ss_pred hcCCCcCCeEEEecccccccCCC-cEEE----eCHHHHHHHHHh----cccceecCCCCHHHHHHHHHHHHHH--hhCHH
Confidence 1132 246999999999998433 2210 011111000000 00000000001 0000111122211 00111
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
..++ ..++++++.+.|++. ++++.. +.
T Consensus 296 ~~~~---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~~-~~ 322 (398)
T 3a2b_A 296 HIEK---------------------------------------------------LWKNTDYAKAQLLDH-GFDLGA-TE 322 (398)
T ss_dssp HHHH---------------------------------------------------HHHHHHHHHHHHHHT-TCCBCS-CC
T ss_pred HHHH---------------------------------------------------HHHHHHHHHHHHHhc-CCCcCC-CC
Confidence 1111 234566677777766 677654 45
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.+++.+.++. ......+.++|.++|. ++.+... .+..++|++++..+++++++++++.|+++.++
T Consensus 323 g~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 323 SPILPIFIRS-NEKTFWVTKMLQDDGV-FVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp SSEEEEECCC-HHHHHHHHHHHHHTTE-ECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCC-HHHHHHHHHHHHHCCc-EEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 6788888753 2235678888888875 4544322 13578999888889999999999999887543
No 85
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.52 E-value=1.8e-12 Score=140.21 Aligned_cols=157 Identities=9% Similarity=-0.034 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
++.+. +.+...+......|... ..+++..+.+++++.+|.+.. ....++|+|||+|+..++.+..
T Consensus 39 ~~~v~-~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~--------~~~v~~~~g~~~a~~~~~~~l~---- 103 (383)
T 3kax_A 39 PQPIQ-TALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQ--------KEWIVFSAGIVPALSTSIQAFT---- 103 (383)
T ss_dssp CHHHH-HHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCC--------GGGEEEESCHHHHHHHHHHHHC----
T ss_pred CHHHH-HHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCC--------hhhEEEcCCHHHHHHHHHHHhC----
Confidence 34444 44444554433333322 567888999999999995422 1268999999999988876531
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC---CCCcCHHHHHHHHHHhhccCCCcEEEEE
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFIFS 360 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~---~grmD~daLe~aI~~d~~kG~~P~~VVa 360 (943)
.+| -.|+++.-+|.+...++..-+.+++.++.+. ++.+|+++|+++|..+ +.+|+.
T Consensus 104 ------~~g---------d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i 162 (383)
T 3kax_A 104 ------KEN---------ESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLL 162 (383)
T ss_dssp ------CTT---------CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEE
T ss_pred ------CCC---------CEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEE
Confidence 122 2477888999999888865445788888753 3459999999999432 556666
Q ss_pred ecCCCcccccccH---HHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 361 GLALPAFLVVDSY---CCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 361 TaGTT~tGaIDpL---~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+...+.+|.+-|. .+|.+ +|++||+ ++++|.+|+++
T Consensus 163 ~~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 201 (383)
T 3kax_A 163 CSPHNPIGRVWKKEELTKLGS--------------------LCTKYNV-------IVVADEIHSDI 201 (383)
T ss_dssp ESSBTTTTBCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred eCCCCCCCcCcCHHHHHHHHH--------------------HHHHCCC-------EEEEEcccccc
Confidence 7788889998764 45555 7999999 99999999876
No 86
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.52 E-value=4.1e-12 Score=136.37 Aligned_cols=291 Identities=10% Similarity=-0.041 Sum_probs=179.7
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
..+.+++++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|+++..+|.+
T Consensus 54 ~~l~~~la~~~~~~~~----------~i~~~~g~~~a~~~~~~~l~----------~~g---------d~vl~~~~~~~~ 104 (354)
T 3ly1_A 54 LMLGNKLAAHHQVEAP----------SILLTAGSSEGIRAAIEAYA----------SLE---------AQLVIPELTYGD 104 (354)
T ss_dssp HHHHHHHHHHTTSCGG----------GEEEESHHHHHHHHHHHHHC----------CTT---------CEEEEESSSCTH
T ss_pred HHHHHHHHHHhCCChH----------HEEEeCChHHHHHHHHHHHh----------CCC---------CeEEECCCCchH
Confidence 4577888999998654 68999999999988876531 122 246678889999
Q ss_pred HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccccc
Q psy11047 314 VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 393 (943)
Q Consensus 314 v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~ 393 (943)
+..++...+.+++.++.+.++.+|+++|+++|++. ..+.+|+.+...+.+|.+-|++++.+
T Consensus 105 ~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~--------------- 165 (354)
T 3ly1_A 105 GEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEP--------------- 165 (354)
T ss_dssp HHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHH---------------
T ss_pred HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHH---------------
Confidence 98888654458899999888999999999999841 12677777888899999999888888
Q ss_pred CchHHHHHH--cCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhc
Q psy11047 394 TNFPNFILS--YFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQ 471 (943)
Q Consensus 394 RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~ 471 (943)
+++. ||+ ++++|.+|+++ .+. +. .+.....+.
T Consensus 166 -----l~~~~~~~~-------~li~De~~~~~-~~~-------------------------------~~--~~~~~~~~~ 199 (354)
T 3ly1_A 166 -----WIASKPANT-------MFIVDEAYAEF-VND-------------------------------PR--FRSISPMIT 199 (354)
T ss_dssp -----HHHTCCTTE-------EEEEECTTGGG-CCC-------------------------------TT--CCCSHHHHH
T ss_pred -----HHHhCCCCe-------EEEEeccHHHh-ccc-------------------------------cc--cCCHHHHhh
Confidence 7666 999 99999999865 220 00 001111112
Q ss_pred CCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHHHH
Q psy11047 472 GLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGLQK 547 (943)
Q Consensus 472 Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl~~ 547 (943)
.....+-+..++||+++... ...+ .++..+..-. .... .. ....+..++....+-. ..+.+
T Consensus 200 ~~~~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~~~~~~-----~~~~---~~--~~~~~~~~a~~~~l~~~~~~~~ 264 (354)
T 3ly1_A 200 QGAENIILLKTFSKIHAMAGMRVGYAV-----AHPTVIALMG-----RYVA---GE--KINFSGVDAALASMNDSAFITY 264 (354)
T ss_dssp TTCSSEEEEEESSSTTCCGGGCCEEEE-----CCHHHHHHHG-----GGTT---CS--CCCHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCEEEEeeChhhccChhhhheeee-----cCHHHHHHHH-----HhcC---CC--CCCHHHHHHHHHHhcCHHHHHH
Confidence 21134577889999987221 1111 0111110000 0000 00 1112222222222211 11222
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
..++ ..++++++.+.|.+. ++++. ++.
T Consensus 265 ~~~~---------------------------------------------------~~~~~~~l~~~l~~~-~~~~~-~~~ 291 (354)
T 3ly1_A 265 SKKS---------------------------------------------------NDVSRQILLKALEDL-KLPYL-PSE 291 (354)
T ss_dssp HHHH---------------------------------------------------HHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred HHHH---------------------------------------------------HHHHHHHHHHHHHHC-CCeEC-CCC
Confidence 2211 234555666666655 56655 456
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
.+.+.+++.+ ....+.+.|.++|. ++.........++|++++ +++|++++++.|+++.+
T Consensus 292 ~~~~~~~~~~---~~~~~~~~l~~~gi-~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 292 GNFVFHQLVV---PLKDYQTHMADAGV-LIGRAFPPADNWCRISLG---TPQEMQWVADTMREFRK 350 (354)
T ss_dssp SSEEEEECSS---CHHHHHHHHHHTTE-ECCCCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCC---CHHHHHHHHHHCCE-EEeecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHH
Confidence 6778888764 25678888888885 444211224679999765 78999999999987654
No 87
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.51 E-value=2.4e-13 Score=145.54 Aligned_cols=302 Identities=12% Similarity=0.070 Sum_probs=175.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|...|...++| +++++++|.+ ..++|+|||+||..++.+.. .+| -
T Consensus 34 y~~~~~~~~l~----~~la~~~g~~------------~~~~~~~gt~a~~~~~~~~~----------~~g---------d 78 (347)
T 1jg8_A 34 YGEDPTINELE----RLAAETFGKE------------AALFVPSGTMGNQVSIMAHT----------QRG---------D 78 (347)
T ss_dssp GTCCHHHHHHH----HHHHHHHTCS------------EEEEESCHHHHHHHHHHHHC----------CTT---------C
T ss_pred cCCChHHHHHH----HHHHHHhCCc------------eEEEecCcHHHHHHHHHHhc----------CCC---------C
Confidence 44455555555 5778888874 36899999999987765421 122 2
Q ss_pred EEEecCCCchHHHH---HHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcc-ccccc---HHH
Q psy11047 303 VAYCSDQAHSSVEK---AGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAF-LVVDS---YCC 375 (943)
Q Consensus 303 vV~~S~~aHySv~K---Aa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~t-GaIDp---L~e 375 (943)
.|++++.+|.+... ++.+.+.+++.+ .++++.+|+++|+++|+.....+..+.+|+.+..++.+ |.+-| +++
T Consensus 79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~ 157 (347)
T 1jg8_A 79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE 157 (347)
T ss_dssp EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence 46778889988654 334444577777 55678899999999986421111135677776666677 88755 567
Q ss_pred hhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHh
Q psy11047 376 LGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRL 455 (943)
Q Consensus 376 Ia~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l 455 (943)
|.+ +|++||+ ++++|+|+.-+ .+ ..
T Consensus 158 i~~--------------------~a~~~~~-------~li~D~a~~~~-~~--~~------------------------- 182 (347)
T 1jg8_A 158 ICT--------------------IAKEHGI-------NVHIDGARIFN-AS--IA------------------------- 182 (347)
T ss_dssp HHH--------------------HHHHHTC-------EEEEEETTHHH-HH--HH-------------------------
T ss_pred HHH--------------------HHHHCCC-------EEEeehhhhhc-ch--hh-------------------------
Confidence 777 9999999 99999985311 00 00
Q ss_pred hccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccC-ccccCCCCCcchHHHH
Q psy11047 456 NSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYM-HWQIPLSKRFRALKLW 534 (943)
Q Consensus 456 ~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~-~~tie~SRrfrALklW 534 (943)
.+ . ...... ..+|++++++||+++.+-+..+. .++.++..-. ... .++ ++-+..++
T Consensus 183 --~~---~-~~~~~~---~~~d~~~~s~sK~l~~~~G~~~~----~~~~~~~~~~-----~~~~~~~--~~~~~~~~--- 239 (347)
T 1jg8_A 183 --SG---V-PVKEYA---GYADSVMFCLSKGLCAPVGSVVV----GDRDFIERAR-----KARKMLG--GGMRQAGV--- 239 (347)
T ss_dssp --HC---C-CHHHHH---HTCSEEEEESSSTTCCSSCEEEE----ECHHHHHHHH-----HHHHHHT--CCCSSTHH---
T ss_pred --cC---C-ChHHhc---ccccEEEEecccccCCCceEEEE----cCHHHHHHHH-----HHHHHcC--CchhHHHH---
Confidence 00 0 011111 24689999999998843221110 0111111000 000 000 00011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHH
Q psy11047 535 FVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV 614 (943)
Q Consensus 535 ~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L 614 (943)
....+..++....+++ ++ ..+.++++.+.|
T Consensus 240 --~~~~~~~~l~~~~~~~-----------------------~~-------------------------~~~~~~~l~~~L 269 (347)
T 1jg8_A 240 --LAAAGIIALTKMVDRL-----------------------KE-------------------------DHENARFLALKL 269 (347)
T ss_dssp --HHHHHHHHHHHSSTTH-----------------------HH-------------------------HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH-----------------------HH-------------------------HHHHHHHHHHHH
Confidence 2222333333221110 00 233456666666
Q ss_pred hCCCCeEEe-cCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 615 LGDPRFEIP-AARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 615 ~~~p~~eIl-~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
++. ++++. .++..+++.|++++.+....++.++|.++|.+ +.+. +.+.+|++++..+++++++++++.|+++.+
T Consensus 270 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~~---~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 270 KEI-GYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVL-ANAV---SDTEIRLVTHKDVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp HHH-TCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEE-CEEE---ETTEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred Hhc-CceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCE-EecC---CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 665 66653 35678888898863111256788888877753 3332 246899998889999999999999988754
No 88
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.51 E-value=1.6e-13 Score=149.91 Aligned_cols=302 Identities=11% Similarity=0.032 Sum_probs=180.3
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|....+|..+.+++++++|.+.. -+++++||+|+..++.++. .+| -.|
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~-----------~i~~~sGt~a~~~~~~~~~----------~~g---------d~V 112 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWA-----------NVQPHSGSQANMAVYMALM----------EPG---------DTL 112 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcc-----------eEEecchHHHHHHHHHHhc----------CCC---------CEE
Confidence 4455568888888999999998642 3566677889888877641 122 246
Q ss_pred EecCCCchHHH---HHH-HHCC-ccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhh
Q psy11047 305 YCSDQAHSSVE---KAG-LIGL-VNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGT 378 (943)
Q Consensus 305 ~~S~~aHySv~---KAa-~LG~-~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~ 378 (943)
++++.+|.+.. .++ ..|. ...+.++++ +++.+|+++|+++|+... +.+|+. .+...|.+.|+++|.+
T Consensus 113 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~--~~p~~~~~~~l~~i~~ 185 (407)
T 2dkj_A 113 MGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIVA--GASAYPRFWDFKAFRE 185 (407)
T ss_dssp EEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHH
T ss_pred EEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEEE--eccccCCCCCHHHHHH
Confidence 67778887763 333 2332 123344444 378999999999998521 445554 3344468889999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhcc
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSK 458 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~ 458 (943)
+|++||+ |+++|++|+.+ .. +
T Consensus 186 --------------------l~~~~~~-------~li~Dea~~~g-~~--~----------------------------- 206 (407)
T 2dkj_A 186 --------------------IADEVGA-------YLVVDMAHFAG-LV--A----------------------------- 206 (407)
T ss_dssp --------------------HHHHHTC-------EEEEECTTTHH-HH--H-----------------------------
T ss_pred --------------------HHHHcCC-------EEEEEcccccc-cc--c-----------------------------
Confidence 9999999 99999999763 11 0
Q ss_pred CcccccchhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCccc---cccCCCCcccccCccccCCCCCcc-hHHH
Q psy11047 459 GRLHCVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLY---LRHENSGLAIDYMHWQIPLSKRFR-ALKL 533 (943)
Q Consensus 459 G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p~Y---L~~~~~g~~~d~~~~tie~SRrfr-ALkl 533 (943)
..... ..++.+|.++.++||++. .+- +.+. ..++.. +.... ..+.. ++-... ...+
T Consensus 207 ----~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~~---~~~~~~~~~l~~~~-------~~~~~-~~~~~~~~~a~ 267 (407)
T 2dkj_A 207 ----AGLHP---NPLPYAHVVTSTTHKTLRGPRG-GLIL---SNDPELGKRIDKLI-------FPGIQ-GGPLEHVIAGK 267 (407)
T ss_dssp ----TTCSC---CCTTTCSEEEEESSGGGCCCSC-EEEE---ESCHHHHHHHHHHH-------TTTTC-SSCCHHHHHHH
T ss_pred ----cCccC---CccccccEEEEeccccCCCCCc-eEEE---ECCHHHHHHHHhhh-------ccccc-CCCcHHHHHHH
Confidence 00000 012247999999999886 322 1110 000111 10000 00110 111111 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHH
Q psy11047 534 WFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEAL 613 (943)
Q Consensus 534 W~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~ 613 (943)
..++..+...++.+.+++ ..++++++.+.
T Consensus 268 ~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~ 296 (407)
T 2dkj_A 268 AVAFFEALQPEFKEYSRL---------------------------------------------------VVENAKRLAEE 296 (407)
T ss_dssp HHHHHHHHSHHHHHHHHH---------------------------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHH---------------------------------------------------HHHHHHHHHHH
Confidence 233333222344444444 24567777778
Q ss_pred HhCCCCeEEecC-CCccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc-------CCCcEEEEeecC----CCCHHHH
Q psy11047 614 VLGDPRFEIPAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL-------RIQGLGRAQNFT----RTTNDDI 681 (943)
Q Consensus 614 L~~~p~~eIl~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~-------~g~~~lR~v~~~----~tt~edI 681 (943)
|++. ++++..+ ...+++.+++.+.......+.+.|.++|. ++.+... ....++|++++. .++++|+
T Consensus 297 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i 374 (407)
T 2dkj_A 297 LARR-GYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGI-TVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEM 374 (407)
T ss_dssp HHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTE-ECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGH
T ss_pred HHhC-CceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCc-eecCCcCccccccccCCCceeeecccccccCCCHHHH
Confidence 8777 7888764 46888899886421124678888888775 4443211 124689996654 4789999
Q ss_pred HHHHHHHHHHHHH
Q psy11047 682 TRDWNEIRNTATE 694 (943)
Q Consensus 682 d~ll~~I~~~~~~ 694 (943)
+++++.|+++..+
T Consensus 375 ~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 375 PLVAELIDRALLE 387 (407)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988765
No 89
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.51 E-value=3.5e-12 Score=140.58 Aligned_cols=289 Identities=14% Similarity=0.053 Sum_probs=177.3
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.+. .+++++||+||..++.+.. .+| -.|+++...|.+.
T Consensus 108 ~l~~~la~~~g~~~------------~i~~~sGt~a~~~~l~~~~----------~~g---------d~Vl~~~~~~~~~ 156 (409)
T 3kki_A 108 MIEKRLAKFTGFDE------------CLLSQSGWNANVGLLQTIC----------QPN---------TNVYIDFFAHMSL 156 (409)
T ss_dssp HHHHHHHHHHTCSE------------EEEESCHHHHHHHHHHHHC----------CTT---------CEEEEETTSCHHH
T ss_pred HHHHHHHHHhCCCe------------EEEecchHHHHHHHHHHhc----------CCC---------CEEEECCCcCHHH
Confidence 45667888888753 4777888999988876431 122 3577899999999
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccC
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQT 394 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~R 394 (943)
..++.+.+..++.++. +|+++|+++|++.. +.+|+.+...+.+|.+.|+++|.+
T Consensus 157 ~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~---------------- 210 (409)
T 3kki_A 157 WEGARYANAQAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVN---------------- 210 (409)
T ss_dssp HHHHHHTTCEEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHH----------------
T ss_pred HHHHHHcCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHH----------------
Confidence 9988654456666654 68999999998642 457777777788999999999999
Q ss_pred chHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCC-
Q psy11047 395 NFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGL- 473 (943)
Q Consensus 395 rfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gi- 473 (943)
+|++||+ |+++|.+|++. .+. + .|.... .. .++
T Consensus 211 ----la~~~~~-------~li~De~~~~g-~~g-~----------------------------~g~~~~----~~-~~~~ 244 (409)
T 3kki_A 211 ----ISKEFGC-------ALLVDESHSLG-THG-P----------------------------NGAGLL----AE-LGLT 244 (409)
T ss_dssp ----HHHHHTC-------EEEEECTTTTT-TSS-G----------------------------GGCCHH----HH-HTCG
T ss_pred ----HHHHcCC-------EEEEECCcccc-ccC-C----------------------------CCCcch----hh-cCCC
Confidence 9999999 99999999875 220 0 000011 11 122
Q ss_pred CCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHHHHHHHHH
Q psy11047 474 GRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGLQKHIREI 552 (943)
Q Consensus 474 e~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl~~~I~~~ 552 (943)
..+|.++.++||+++.. ...+ ..++..+..-... ...+....+ ...+.+...+..+.. +...+..++
T Consensus 245 ~~~di~~~s~sK~~~~~-gg~v----~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~aa~~aal~~~~~~~~~~~~- 312 (409)
T 3kki_A 245 REVHFMTASLAKTFAYR-AGAI----WCNNEVNRCVPFI----SYPAIFSST--LLPYEAAGLETTLEIIESADNRRQH- 312 (409)
T ss_dssp GGCSEEEEESSSTTCSS-CEEE----EESSSGGGTHHHH----CHHHHHSBC--CCHHHHHHHHHHHHHHHHCHHHHHH-
T ss_pred CCCCEEEeecchhhCCC-ceEE----EECHHHHHHHHHh----CcCccccCC--CcHHHHHHHHHHHHHHhcCHHHHHH-
Confidence 35789999999999833 1111 0011111000000 000001111 111111111221110 000111111
Q ss_pred HhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEEE
Q psy11047 553 FSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVV 632 (943)
Q Consensus 553 l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~ 632 (943)
..++++++.+.|.+. ++++. ...+++.
T Consensus 313 --------------------------------------------------~~~~~~~l~~~L~~~-g~~~~--~~~~~~~ 339 (409)
T 3kki_A 313 --------------------------------------------------LDRMARKLRIGLSQL-GLTIR--SESQIIG 339 (409)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHTT-TCCCC--CSSSEEE
T ss_pred --------------------------------------------------HHHHHHHHHHHHHHc-CCccC--CCCCEEE
Confidence 235667788888776 56665 4667788
Q ss_pred EEecCCChHHHHHHHHHhccCcEEEeec----ccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 633 IRLLGENILTEKLLKRLNSKGRLHCVPA----SLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 633 Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t----~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
+.+... .....+.++|.++|.+ +.+. .-.+..++|++++..+++++|+++++.|+++.+
T Consensus 340 ~~~~~~-~~~~~~~~~L~~~Gv~-v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~ 402 (409)
T 3kki_A 340 LETGDE-RNTEKVRDYLESNGVF-GSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVN 402 (409)
T ss_dssp EEEESH-HHHHHHHHHHHHTTEE-CEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeCCH-HHHHHHHHHHHHCCce-EeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHh
Confidence 887642 2356788888888754 4332 123567999998889999999999999987754
No 90
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.51 E-value=6.3e-13 Score=144.68 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=97.6
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHH
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVE 315 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~ 315 (943)
+.+.+++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|++++.+|.++.
T Consensus 66 l~~~la~~~~~~~~----------~v~~~~g~~~a~~~~~~~~~----------~~g---------d~Vl~~~~~~~~~~ 116 (381)
T 1v2d_A 66 LREALAEEFAVEPE----------SVVVTSGATEALYVLLQSLV----------GPG---------DEVVVLEPFFDVYL 116 (381)
T ss_dssp HHHHHHHHHTSCGG----------GEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEEESCCTTHH
T ss_pred HHHHHHHhcCCChh----------hEEEcCChHHHHHHHHHHhC----------CCC---------CEEEEcCCCchhHH
Confidence 44456677887654 58999999999988876541 122 24677788999988
Q ss_pred HHHHHCCccEEEEecC---CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhcccccccccc
Q psy11047 316 KAGLIGLVNMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYK 389 (943)
Q Consensus 316 KAa~LG~~~v~~Vp~D---~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~ 389 (943)
.++...+.+++.++.+ +++.+|+++|+++|+.+ +.+|+.+...+.+|.+-| +++|.+
T Consensus 117 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~----------- 179 (381)
T 1v2d_A 117 PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAIAR----------- 179 (381)
T ss_dssp HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH-----------
T ss_pred HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHHHHHHH-----------
Confidence 8775444588889886 56889999999888532 667777788888998855 788888
Q ss_pred ccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 390 MKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 390 i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+++|.+|+++
T Consensus 180 ---------~~~~~~~-------~li~De~~~~~ 197 (381)
T 1v2d_A 180 ---------LARAHDL-------FLISDEVYDEL 197 (381)
T ss_dssp ---------HHHHTTC-------EEEEECTTTTC
T ss_pred ---------HHHHcCC-------EEEEEcCcccc
Confidence 9999999 99999999876
No 91
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.51 E-value=2.2e-12 Score=140.67 Aligned_cols=157 Identities=10% Similarity=-0.001 Sum_probs=115.5
Q ss_pred HHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCC-cEEEcCChHHHHHHHHHHHHHHHHHh
Q psy11047 207 LLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPG-GGVLQTTASESTLICLLAGRTEAIRK 285 (943)
Q Consensus 207 ilgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~-~GvfTsGGTeANL~AL~aAR~~~l~~ 285 (943)
.+.+.+...++.....|...+...+++..+.+|+.+.+|++.. .. ..++|+|||+|+..++.+..
T Consensus 47 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~--------~~~~v~~~~g~~~a~~~~~~~~~------ 112 (386)
T 1u08_A 47 YLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPD--------ADSDITVTAGATEALYAAITALV------ 112 (386)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCC--------TTTTEEEESSHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCC--------CCCCEEEcCChHHHHHHHHHHhC------
Confidence 3445555555432233444445688999999999999997532 13 68999999999988876531
Q ss_pred hcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 286 YQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 286 ~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
.+| -.|++++-+|.++..++...+.+++.++.+. ++.+|+++|+++|..+ +.+|+.+...
T Consensus 113 ----~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~ 173 (386)
T 1u08_A 113 ----RNG---------DEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPH 173 (386)
T ss_dssp ----CTT---------CEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSC
T ss_pred ----CCC---------CEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhccc------CEEEEEeCCC
Confidence 122 2466777889888887755445888899875 5789999999988532 5677777788
Q ss_pred Cccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|.+-| +++|.+ +|++||+ |+++|.+|+++
T Consensus 174 nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 208 (386)
T 1u08_A 174 NPSATVWQQADFAALWQ--------------------AIAGHEI-------FVISDEVYEHI 208 (386)
T ss_dssp TTTCCCCCHHHHHHHHH--------------------HHTTSCC-------EEEEECTTTTC
T ss_pred CCCCccCCHHHHHHHHH--------------------HHHHcCc-------EEEEEcccccc
Confidence 88998865 677777 9999999 99999999876
No 92
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.51 E-value=2.5e-12 Score=140.65 Aligned_cols=155 Identities=7% Similarity=-0.123 Sum_probs=111.9
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhc
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQ 287 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~ 287 (943)
+.+.+...++.....|... ..+++..+.+|+++.+|++.. ....++|+|||+|+..++.+..
T Consensus 49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~--------~~~v~~t~g~~~a~~~~~~~l~-------- 110 (399)
T 1c7n_A 49 LIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQ--------TDWIINTAGVVPAVFNAVREFT-------- 110 (399)
T ss_dssp HHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCC--------GGGEEEESSHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCC--------hhhEEEcCCHHHHHHHHHHHhc--------
Confidence 4444444443322333332 678888999999998885422 1268999999999988876531
Q ss_pred ccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC-CC--CCcCHHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 288 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD-DK--LSLRGDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 288 ~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D-~~--grmD~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
.+| -.|++..-+|.+...++...+.+++.+|.+ ++ +.+|+++|+++|+.. .+.+|+.+...
T Consensus 111 --~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~ 174 (399)
T 1c7n_A 111 --KPG---------DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPH 174 (399)
T ss_dssp --CTT---------CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSB
T ss_pred --CCC---------CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCC
Confidence 122 246778889999888875434477888875 33 369999999999732 15666677788
Q ss_pred Cccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 175 nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 209 (399)
T 1c7n_A 175 NPVGRVWKKDELQKIKD--------------------IVLKSDL-------MLWSDEIHFDL 209 (399)
T ss_dssp TTTTBCCCHHHHHHHHH--------------------HHHHSSC-------EEEEECTTTTC
T ss_pred CCCCcCcCHHHHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 88999988 888888 9999999 99999999876
No 93
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.50 E-value=2.6e-12 Score=138.82 Aligned_cols=294 Identities=11% Similarity=-0.022 Sum_probs=171.7
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCc-EEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGG-GVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~-GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
+|...++-.++.+++++++|.+++ .. .++|+|||+++..++.+. + .+| +- |
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~---------~~~i~~t~g~t~a~~~~~~~l----~------~~g--------d~-v 95 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTG---------YKVLFIQGGASTQFAMIPMNF----L------KEG--------QT-A 95 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSS---------EEEEEESSHHHHHHHHHHHHH----C------CTT--------CE-E
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCC---------cEEEEECCCchHHHHHHHHhc----C------CCC--------Ce-E
Confidence 566667777899999999999752 13 367899999998776642 1 122 22 3
Q ss_pred EecCCCchHH--HHHH-HHCCccEEEEecCC---CC-CcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc-ccHHHh
Q psy11047 305 YCSDQAHSSV--EKAG-LIGLVNMRYIESDD---KL-SLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV-DSYCCL 376 (943)
Q Consensus 305 ~~S~~aHySv--~KAa-~LG~~~v~~Vp~D~---~g-rmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI-DpL~eI 376 (943)
++....|++. ...+ ..| +++.++++. .+ .+|.++++ |+. .+.+|+.+...+.+|.+ +| +
T Consensus 96 l~~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~---l 162 (362)
T 2c0r_A 96 NYVMTGSWASKALKEAKLIG--DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKA---F 162 (362)
T ss_dssp EEEECSHHHHHHHHHHHHHS--CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSS---C
T ss_pred EEEecCcHhHHHHHHHHHhC--CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccc---c
Confidence 3344566663 3444 356 788888762 22 35666543 322 27788888889999995 65 3
Q ss_pred hhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhh
Q psy11047 377 GTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLN 456 (943)
Q Consensus 377 a~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~ 456 (943)
.+ + +|+ |+|+|+||+.+ ..
T Consensus 163 ~~--------------------i---~~~-------~vivD~a~~~~-~~------------------------------ 181 (362)
T 2c0r_A 163 PD--------------------T---GSV-------PLIGDMSSDIL-SR------------------------------ 181 (362)
T ss_dssp CC--------------------C---TTS-------CEEEECTTTTT-SS------------------------------
T ss_pred cc--------------------c---CCC-------EEEEEChhhcc-CC------------------------------
Confidence 44 4 688 99999999755 21
Q ss_pred ccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccc---cccCCCCcccccCcc----ccCCCCC-c
Q psy11047 457 SKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLY---LRHENSGLAIDYMHW----QIPLSKR-F 528 (943)
Q Consensus 457 ~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~Y---L~~~~~g~~~d~~~~----tie~SRr-f 528 (943)
..+ +...|.++.++|||++...-+.+. ..+.. +..... ...++..+ ...++-. +
T Consensus 182 -----~~~--------~~~~d~~~~s~~K~~g~~G~G~l~----~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~t~~~~ 243 (362)
T 2c0r_A 182 -----PFD--------LNQFGLVYAGAQKNLGPSGVTVVI----VREDLVAESPKHLP-TMLRYDTYVKNNSLYNTPPSF 243 (362)
T ss_dssp -----CCC--------GGGCSEEEEETTTTTCCSSCEEEE----EEGGGSSSCCTTSC-GGGCHHHHHHTTTCSSCCCHH
T ss_pred -----ccc--------hhHCcEEEEeccccccCcCcEEEE----EcHHHHhhccccCc-hHHhHHHHhhccCcCCCchHH
Confidence 011 112389999999999833312110 00111 110000 00000000 0011111 1
Q ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 RALKLWFVIRNFGIK-GLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 rALklW~tLr~~G~~-Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
....+..+++.+... ++.+..++ ..+++
T Consensus 244 ~~~a~~~al~~~~~~~~~~~~~~~---------------------------------------------------~~~~~ 272 (362)
T 2c0r_A 244 GIYMVNEVLKWIEERGGLEGVQQA---------------------------------------------------NRKKA 272 (362)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHH---------------------------------------------------HHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHH---------------------------------------------------HHHHH
Confidence 112222233322222 33333333 35678
Q ss_pred HHHHHHHhCCCCe-EEecC---CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHH
Q psy11047 608 QKFEALVLGDPRF-EIPAA---RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITR 683 (943)
Q Consensus 608 ~~l~~~L~~~p~~-eIl~~---~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ 683 (943)
+++.+.|.+.+++ ++..+ +..++++|++++ .....++.++|.++|. .+.+. ....+.+|++++..++++|+++
T Consensus 273 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gi-~~~~g-~~~~~~iRis~~~~~~~e~i~~ 349 (362)
T 2c0r_A 273 SLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-EELEKEFVKASEQEGF-VGLKG-HRSVGGLRASIYNAVPYESCEA 349 (362)
T ss_dssp HHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-HHHHHHHHHHHHHTTE-ESCBC-CTTTCSEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-cchHHHHHHHHHHCCC-eeccC-CCCCCEEEEECCCCCCHHHHHH
Confidence 8888889888656 77543 235678888763 2235788888988886 33321 1123569999999999999999
Q ss_pred HHHHHHHHHH
Q psy11047 684 DWNEIRNTAT 693 (943)
Q Consensus 684 ll~~I~~~~~ 693 (943)
+++.|+++.+
T Consensus 350 l~~~l~~~~~ 359 (362)
T 2c0r_A 350 LVQFMEHFKR 359 (362)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 94
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.50 E-value=1.6e-13 Score=149.68 Aligned_cols=302 Identities=10% Similarity=0.055 Sum_probs=183.1
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..+...++|..+++++++++|.+.. -+++++||+|+..++.++. .+| -.|
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~-----------~i~~~sGt~a~~~a~~~~~----------~~g---------d~V 112 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHA-----------NVQPHSGAQANMAVYFTVL----------EHG---------DTV 112 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce-----------EEEecCcHHHHHHHHHHhc----------CCC---------CEE
Confidence 4467788999999999999998742 3455666999998877641 122 236
Q ss_pred EecCCCchHHHH-HH---HHCC-ccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhh
Q psy11047 305 YCSDQAHSSVEK-AG---LIGL-VNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGT 378 (943)
Q Consensus 305 ~~S~~aHySv~K-Aa---~LG~-~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~ 378 (943)
+++..+|.+... ++ ..|. ..++.++++ +++.+|+++|+++|+... +.+|+. ..++.|...|+++|.+
T Consensus 113 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~--~~~~~~~~~~l~~i~~ 185 (405)
T 2vi8_A 113 LGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR-----PKLIVA--AAAAYPRIIDFAKFRE 185 (405)
T ss_dssp EEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHH
T ss_pred EEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcC-----CeEEEE--eCCCCCccCCHHHHHH
Confidence 666778877643 11 2232 256667765 678999999999998631 334444 2345677778999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhcc
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSK 458 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~ 458 (943)
+|++||+ |+++|++|+.+ .+ +.
T Consensus 186 --------------------l~~~~~~-------~li~Dea~~~g-~~--~~---------------------------- 207 (405)
T 2vi8_A 186 --------------------IADEVGA-------YLMVDMAHIAG-LV--AA---------------------------- 207 (405)
T ss_dssp --------------------HHHHHTC-------EEEEECTTTHH-HH--HT----------------------------
T ss_pred --------------------HHHHcCC-------EEEEEcccccc-cc--cc----------------------------
Confidence 9999999 99999999732 11 00
Q ss_pred CcccccchhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCccc---cccCCCCcccccCccccCCCCCc-chHHH
Q psy11047 459 GRLHCVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLY---LRHENSGLAIDYMHWQIPLSKRF-RALKL 533 (943)
Q Consensus 459 G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p~Y---L~~~~~g~~~d~~~~tie~SRrf-rALkl 533 (943)
+ ..+ .+++.+|.++.++||+++ ... +.+. ..+.. +.... ..+.. ++-.. ....+
T Consensus 208 ~--~~~------~~~~~~di~~~s~sK~~~g~~g-G~~~----~~~~~~~~l~~~~-------~~~~~-~~~~~~~~aa~ 266 (405)
T 2vi8_A 208 G--LHP------NPVPYAHFVTTTTHKTLRGPRG-GMIL----CQEQFAKQIDKAI-------FPGIQ-GGPLMHVIAAK 266 (405)
T ss_dssp T--SSC------CSTTTCSEEEEESSSTTCCCSC-EEEE----ECHHHHHHHHHHH-------TTTTC-SSCCHHHHHHH
T ss_pred C--cCC------CccccCCEEEEeccccCCCCCC-eEEE----EcHHHHHHHHhhh-------ccccc-CCCCHHHHHHH
Confidence 0 000 112357999999999987 322 2221 00111 11000 00111 11111 11122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHH
Q psy11047 534 WFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEAL 613 (943)
Q Consensus 534 W~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~ 613 (943)
..+++.+...++.+.+++ ..++++++.+.
T Consensus 267 ~~al~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~ 295 (405)
T 2vi8_A 267 AVAFGEALQDDFKAYAKR---------------------------------------------------VVDNAKRLASA 295 (405)
T ss_dssp HHHHHHHHSHHHHHHHHH---------------------------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH---------------------------------------------------HHHHHHHHHHH
Confidence 223333222344444443 24567777777
Q ss_pred HhCCCCeEEecC-CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecc-------cCCCcEEEEeecC----CCCHHHH
Q psy11047 614 VLGDPRFEIPAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-------LRIQGLGRAQNFT----RTTNDDI 681 (943)
Q Consensus 614 L~~~p~~eIl~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-------~~g~~~lR~v~~~----~tt~edI 681 (943)
|++. ++++..+ ...+++.+++.........+.+.|.++|.+ +.+.. ..+...+|+++.. .++++|+
T Consensus 296 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i 373 (405)
T 2vi8_A 296 LQNE-GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGIT-VNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEM 373 (405)
T ss_dssp HHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEE-CEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHH
T ss_pred HHhC-CCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCce-eccCcCccccCCCCCCCceEEeeeeeeecCCCHHHH
Confidence 8777 8888765 357888888863211245677788777754 44321 1134579996654 6789999
Q ss_pred HHHHHHHHHHHHHH
Q psy11047 682 TRDWNEIRNTATEI 695 (943)
Q Consensus 682 d~ll~~I~~~~~~l 695 (943)
+++++.|+++..++
T Consensus 374 ~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 374 DEIAAIIGLVLKNV 387 (405)
T ss_dssp HHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999886554
No 95
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.50 E-value=2e-12 Score=144.16 Aligned_cols=155 Identities=10% Similarity=-0.023 Sum_probs=105.5
Q ss_pred HHHHHHHHHhcc-CccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhh
Q psy11047 208 LGDMLSDAINCL-GFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKY 286 (943)
Q Consensus 208 lgd~L~~alN~n-~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~ 286 (943)
+.+.+...+... ...|...+...+++..+.+++.+. |.+-. ....++|+|||+|+..++.+..
T Consensus 76 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~--------~~~v~~t~g~t~al~~~~~~l~------- 139 (427)
T 3dyd_A 76 VTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLE--------AKDVILTSGCSQAIDLCLAVLA------- 139 (427)
T ss_dssp HHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCC--------GGGEEEESSHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCC--------hHHEEEecCcHHHHHHHHHHhc-------
Confidence 334444444332 223434444555655554444332 22211 1368999999999988876532
Q ss_pred cccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 287 QQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 287 ~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
.+| -.|+++.-+|.....++...+.+++.++.+ .++.+|+++|+++|++. +.+|+.+...
T Consensus 140 ---~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~ 201 (427)
T 3dyd_A 140 ---NPG---------QNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPS 201 (427)
T ss_dssp ---CTT---------CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSC
T ss_pred ---CCC---------CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCC
Confidence 122 246777788888887775444477777765 46789999999888653 5677777888
Q ss_pred Cccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|.+-| +++|++ +|++||+ ++++|.+|+++
T Consensus 202 nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~~i~Deay~~~ 236 (427)
T 3dyd_A 202 NPCGSVFSKRHLQKILA--------------------VAARQCV-------PILADEIYGDM 236 (427)
T ss_dssp TTTCCCCCHHHHHHHHH--------------------HHHHTTC-------CEEEECTTTTC
T ss_pred CCCCCCCCHHHHHHHHH--------------------HHHHCCC-------EEEEEcCchhh
Confidence 99999988 888888 9999999 99999999886
No 96
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.49 E-value=9.6e-12 Score=135.23 Aligned_cols=291 Identities=10% Similarity=-0.025 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
..+++..+.+|+.+.+|++.. ....++|+|||+++..++.+.. .+| -.|++++
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~--------~~~v~~~~G~~~al~~~~~~l~----------~~g---------d~Vl~~~ 123 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVT--------RDNLWAANGSNEILQQLLQAFG----------GPG---------RTALGFQ 123 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCC--------GGGEEEESHHHHHHHHHHHHHC----------STT---------CEEEEEE
T ss_pred HHHHHHHHHHhhhhcccCCCC--------hHhEEECCChHHHHHHHHHHhc----------CCC---------CEEEEcC
Confidence 368999999999998876522 1268999999999877765431 122 2467778
Q ss_pred CCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccc
Q psy11047 309 QAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFY 388 (943)
Q Consensus 309 ~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~ 388 (943)
.+|.++..++...+.+++.+|.++++.+|+++|+++++.. .+.+|+.+...+.+|.+-|++++.+
T Consensus 124 ~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~---------- 188 (369)
T 3cq5_A 124 PSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVER---------- 188 (369)
T ss_dssp SSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHH----------
T ss_pred CChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHH----------
Confidence 8999988887544457888998888899999999999762 1456666788888999999999999
Q ss_pred cccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhh
Q psy11047 389 KMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL 468 (943)
Q Consensus 389 ~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~ 468 (943)
+|+.+++ ++++|.+|+++ .+. .....
T Consensus 189 ----------l~~~~~~-------~li~De~~~~~-~~~------------------------------------~~~~~ 214 (369)
T 3cq5_A 189 ----------IINVAPG-------IVIVDEAYAEF-SPS------------------------------------PSATT 214 (369)
T ss_dssp ----------HHHHCSS-------EEEEECTTGGG-CCS------------------------------------CCGGG
T ss_pred ----------HHHhCCC-------EEEEECCchhh-cCC------------------------------------cchHH
Confidence 9999999 99999999876 220 00011
Q ss_pred hhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHH-H
Q psy11047 469 RIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIK-G 544 (943)
Q Consensus 469 ~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~-G 544 (943)
.+......+-+..++||+++... ...+ ..+..+..-... ...|+ ...+..++....+-.. .
T Consensus 215 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-----~~~~~~~~l~~~----~~~~~------~~~~~~~a~~~~l~~~~~ 279 (369)
T 3cq5_A 215 LLEKYPTKLVVSRTMSKAFDFAGGRLGYFV-----ANPAFIDAVMLV----RLPYH------LSALSQAAAIVALRHSAD 279 (369)
T ss_dssp GTTTCTTTEEEEEESSSTTSCGGGCCEEEE-----ECTHHHHHHHTT----SCTTC------SCHHHHHHHHHHHHTHHH
T ss_pred HHhhCCCCEEEEEechHhcCCcccceEEEE-----eCHHHHHHHHHc----CCCCC------CCHHHHHHHHHHhcCHHH
Confidence 11111114578889999997321 1111 011111000000 00011 2233334333333211 1
Q ss_pred HHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEec
Q psy11047 545 LQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA 624 (943)
Q Consensus 545 l~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~ 624 (943)
+.+..++ ..++++++.+.|++ +++++.
T Consensus 280 ~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~-~g~~~~- 306 (369)
T 3cq5_A 280 TLGTVEK---------------------------------------------------LSVERVRVAARLEE-LGYAVV- 306 (369)
T ss_dssp HHTHHHH---------------------------------------------------HHHHHHHHHHHHHH-HTCEEE-
T ss_pred HHHHHHH---------------------------------------------------HHHHHHHHHHHHHh-CCCEEC-
Confidence 1111111 23455666666665 367776
Q ss_pred CCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy11047 625 ARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTA 692 (943)
Q Consensus 625 ~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~ 692 (943)
++..+++.|++. .+ ..++.++|.++|. ++.+. ....++|++++ +++|++++++.|+++.
T Consensus 307 ~~~~~~~~~~~~-~~--~~~l~~~l~~~gi-~v~~~--~~~~~iRis~~---~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 307 PSESNFVFFGDF-SD--QHAAWQAFLDRGV-LIRDV--GIAGHLRTTIG---VPEENDAFLDAAAEII 365 (369)
T ss_dssp CCSSSEEEEECC-SS--HHHHHHHHHHTTE-ECBCC--SCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECC-CC--HHHHHHHHHHCCE-EEEEC--CCCCeEEEEeC---CHHHHHHHHHHHHHHH
Confidence 556778888875 22 4678888887775 44443 23578999765 7899999999988764
No 97
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.49 E-value=4.3e-13 Score=161.74 Aligned_cols=131 Identities=9% Similarity=-0.027 Sum_probs=95.4
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+.+|+++|.+. ..++++|+|+||..++.+.. .+| -.|+++..+|.|+
T Consensus 177 e~e~~lA~~~gae~-----------~i~v~nGtt~an~~ai~al~----------~pG---------D~VLv~~~~H~S~ 226 (730)
T 1c4k_A 177 AAEKHAARVYNADK-----------TYFVLGGSSNANNTVTSALV----------SNG---------DLVLFDRNNHKSV 226 (730)
T ss_dssp HHHHHHHHHTTCSE-----------EEEESSHHHHHHHHHHHHHC----------CTT---------CEEEEETTCCHHH
T ss_pred HHHHHHHHHHCCCc-----------EEEECCHHHHHHHHHHHHhc----------CCC---------CEEEEcCCchHHH
Confidence 34567799999864 35678888899988876531 122 2578899999999
Q ss_pred HHH-HHHCCccEEEEecCCC-----CCcCHHHH-----HHHHHHh-hcc--CCCc-EEEEEecCCCcccccccHHHhhhh
Q psy11047 315 EKA-GLIGLVNMRYIESDDK-----LSLRGDKL-----IEAIERD-KKK--HLIP-FFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 315 ~KA-a~LG~~~v~~Vp~D~~-----grmD~daL-----e~aI~~d-~~k--G~~P-~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
..+ +.+.+..++.++.+.+ |.+|+++| +++|++. ... ...| .+++++.+ |.+|.+.|+++|++
T Consensus 227 ~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~- 304 (730)
T 1c4k_A 227 YNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVK- 304 (730)
T ss_dssp HHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHH-
T ss_pred HHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHH-
Confidence 998 5565557777766422 55888888 7777653 110 1123 56777776 46899999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++|+|+||++.
T Consensus 305 -------------------la~~~g~-------~livDeAh~~~ 322 (730)
T 1c4k_A 305 -------------------RIGHLCD-------YIEFDSAWVGY 322 (730)
T ss_dssp -------------------HHGGGBS-------EEEEECTTCCG
T ss_pred -------------------HHHHcCC-------eEEEEcccccc
Confidence 9999999 99999999864
No 98
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.49 E-value=6.2e-13 Score=146.73 Aligned_cols=156 Identities=12% Similarity=0.011 Sum_probs=115.0
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCC-cEEEcCChHHHHHHHHHHHHHHHHHhh
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPG-GGVLQTTASESTLICLLAGRTEAIRKY 286 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~-~GvfTsGGTeANL~AL~aAR~~~l~~~ 286 (943)
+.+.+...++.....|...+...+++..+.+|+.+.+|++.. .. ..++|+|||+|+..++.+..
T Consensus 43 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~--------~~~~v~~t~g~~~al~~~~~~~~------- 107 (411)
T 2o0r_A 43 MLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYD--------PETEVLVTVGATEAIAAAVLGLV------- 107 (411)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC--------TTTSEEEEEHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC--------CCceEEEeCCHHHHHHHHHHHhc-------
Confidence 445555555432234444444678999999999999997532 12 68999999999988876531
Q ss_pred cccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC---CCCcCHHHHHHHHHHhhccCCCcEEEEEecC
Q psy11047 287 QQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFIFSGLA 363 (943)
Q Consensus 287 ~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~---~grmD~daLe~aI~~d~~kG~~P~~VVaTaG 363 (943)
.+| -.|+++..+|.++..++...+.+++.++.+. .+.+|+++|+++|+.+ +.+|+.+..
T Consensus 108 ---~~g---------d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~ 169 (411)
T 2o0r_A 108 ---EPG---------SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSP 169 (411)
T ss_dssp ---CTT---------CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESS
T ss_pred ---CCC---------CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCC
Confidence 122 2467778899998887755445788888764 3679999999988642 567777778
Q ss_pred CCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 364 LPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 364 TT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 170 ~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 205 (411)
T 2o0r_A 170 HNPTGAVLSATELAAIAE--------------------IAVAANL-------VVITDEVYEHL 205 (411)
T ss_dssp CTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred CCCCCCCCCHHHHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 888998855 578888 9999999 99999999876
No 99
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.49 E-value=5.5e-12 Score=140.40 Aligned_cols=145 Identities=12% Similarity=0.070 Sum_probs=108.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe
Q psy11047 227 PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC 306 (943)
Q Consensus 227 PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~ 306 (943)
....+++..+.+|+.+..|..-.. .....+||+|||+||..++.+.+ .+| -.|++
T Consensus 86 ~g~~~l~~~la~~~~~~~~~~~~~------~~~~v~~~~gg~~a~~~~~~~l~----------~~g---------d~vl~ 140 (435)
T 3piu_A 86 HGLPAFKKAMVDFMAEIRGNKVTF------DPNHLVLTAGATSANETFIFCLA----------DPG---------EAVLI 140 (435)
T ss_dssp TCCHHHHHHHHHHHHHHTTTSSCC------CGGGEEEEEHHHHHHHHHHHHHC----------CTT---------CEEEE
T ss_pred CCcHHHHHHHHHHHHHhhCCCCCC------CHHHEEEcCChHHHHHHHHHHhc----------CCC---------CeEEE
Confidence 345788888988888877632110 01368999999999988876532 122 24677
Q ss_pred cCCCchHHHHHHH-HCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhc
Q psy11047 307 SDQAHSSVEKAGL-IGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAM 380 (943)
Q Consensus 307 S~~aHySv~KAa~-LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~ 380 (943)
.+-.|.++..++. ..+.+++.++.+. .+.+|+++|+++|++...++..+.+|+.+..++.+|.+-| +++|.+
T Consensus 141 ~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~-- 218 (435)
T 3piu_A 141 PTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLS-- 218 (435)
T ss_dssp EESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHH--
T ss_pred CCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHH--
Confidence 7888998888775 5555888898875 4568999999999876555545778888888888998855 567777
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+++|.+|+++
T Consensus 219 ------------------~~~~~~~-------~li~Dea~~~~ 236 (435)
T 3piu_A 219 ------------------FVEDKGI-------HLISDEIYSGT 236 (435)
T ss_dssp ------------------HHHHHTC-------EEEEECTTGGG
T ss_pred ------------------HHHHcCC-------EEEEecccccc
Confidence 9999999 99999999875
No 100
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.48 E-value=6.1e-12 Score=136.84 Aligned_cols=293 Identities=9% Similarity=-0.040 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+.+++++|.++ .+++++||+|+..++.+.. .+| -.|+++...
T Consensus 84 ~~~~~l~~~la~~~g~~~------------~i~~~sGt~a~~~~~~~~~----------~~g---------d~v~~~~~~ 132 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR------------ALLFISGFAANQAVIAAMM----------AKE---------DRIAADRLS 132 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE------------EEEESCHHHHHHHHHHHHC----------CTT---------CEEEEETTC
T ss_pred HHHHHHHHHHHHHhCCCc------------EEEeCCcHHHHHHHHHHhC----------CCC---------cEEEEcccc
Confidence 344456677788888752 5777778999988775421 122 246788899
Q ss_pred chHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 311 HSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 311 HySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
|.+...++.+.+.+++.+|. +|+++|++.|++... .+.+|+.....+.+|.+.|+++|.+
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~------------ 192 (384)
T 1bs0_A 133 HASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQ------------ 192 (384)
T ss_dssp CHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHH------------
T ss_pred cHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHH------------
Confidence 99998888654557777774 579999999876421 2466776667788999999999999
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhh
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRI 470 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l 470 (943)
+|++||+ |+++|++|+-+ .+. . +| ......+
T Consensus 193 --------l~~~~~~-------~li~De~~~~~-~~~-~----------------------------~~----~~~~~~~ 223 (384)
T 1bs0_A 193 --------VTQQHNG-------WLMVDDAHGTG-VIG-E----------------------------QG----RGSCWLQ 223 (384)
T ss_dssp --------HHHHTTC-------EEEEECTTTTT-TSS-G----------------------------GG----CCHHHHT
T ss_pred --------HHHHcCc-------EEEEECCcccc-eec-C----------------------------CC----CchHHhc
Confidence 9999999 99999999754 210 0 00 0000111
Q ss_pred cCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHH---HHHHHHHHHHHH
Q psy11047 471 QGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWF---VIRNFGIKGLQK 547 (943)
Q Consensus 471 ~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~---tLr~~G~~Gl~~ 547 (943)
+ ...|.++.++||+++... +.+. ..+..+..-.. ....|.... ....+.++. +++.+....+.+
T Consensus 224 -~-~~~di~~~s~sK~~~~~G-G~~~----~~~~~~~~l~~----~~~~~~~~~--~~~~~~~~~~~~al~~~~~~~~~~ 290 (384)
T 1bs0_A 224 -K-VKPELLVVTFGKGFGVSG-AAVL----CSSTVADYLLQ----FARHLIYST--SMPPAQAQALRASLAVIRSDEGDA 290 (384)
T ss_dssp -T-CCCSEEEEESSSTTSSCC-EEEE----ECHHHHHHHHH----HCHHHHSSB--CCCHHHHHHHHHHHHHHHSHHHHH
T ss_pred -C-CCCcEEEeeccchhhccC-cEEE----eCHHHHHHHHH----hchhhhcCC--CCCHHHHHHHHHHHHHHhccccHH
Confidence 2 247889999999998432 2110 01111100000 000010000 111222222 222221001122
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
..++ ..++++++.+.|++. ++++. ++.
T Consensus 291 ~~~~---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~-~~~ 317 (384)
T 1bs0_A 291 RREK---------------------------------------------------LAALITRFRAGVQDL-PFTLA-DSC 317 (384)
T ss_dssp HHHH---------------------------------------------------HHHHHHHHHHHHTTS-SCEEC-SCC
T ss_pred HHHH---------------------------------------------------HHHHHHHHHHHHHhc-CCccc-CCC
Confidence 2222 245677888888876 67776 356
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc----CCCcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL----RIQGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~----~g~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
.+++.++++. .....++.++|.++|. .+.+... .+..++|++++..+++++++++++.|+++
T Consensus 318 ~~~~~~~~~~-~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 318 SAIQPLIVGD-NSRALQLAEKLRQQGC-WVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp SSBCCEEEES-HHHHHHHHHHHHHTTE-ECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC-HHHHHHHHHHHHHCCc-EEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 6777777753 1235678888888874 4544322 23478999888889999999999998875
No 101
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.48 E-value=2.3e-12 Score=142.95 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
..+++..+.+|+.+.+|++... +....++|+|||+++..++.+.. .+| -.|+++.
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~------~~~~i~~~~G~~~ai~~~~~~~~----------~~g---------d~Vl~~~ 139 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRF------DPERVVMAGGATGANETIIFCLA----------DPG---------DAFLVPS 139 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCC------CTTSCEEEEHHHHHHHHHHHHHC----------CTT---------CEEEEES
T ss_pred cHHHHHHHHHHHHHhcCCCCCC------ChhhEEEccChHHHHHHHHHHhC----------CCC---------CeEEEcc
Confidence 6788999999999888854110 01357899999999988876532 122 2466778
Q ss_pred CCchHHHHHH-HHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccc
Q psy11047 309 QAHSSVEKAG-LIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIV 382 (943)
Q Consensus 309 ~aHySv~KAa-~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~ 382 (943)
-+|.+...++ .+.+..++.+|.+. .+.+|+++|+++|+.....+..+.+|+.+..++.+|.+-| +++|.+
T Consensus 140 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~---- 215 (428)
T 1iay_A 140 PYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLS---- 215 (428)
T ss_dssp SCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHH----
T ss_pred CCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHH----
Confidence 8888877755 34445788888863 4579999999999875444434677777778888999988 888888
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 216 ----------------~~~~~~~-------~li~Dea~~~~ 233 (428)
T 1iay_A 216 ----------------FTNQHNI-------HLVCDEIYAAT 233 (428)
T ss_dssp ----------------HHHTTTC-------EEEEECTTGGG
T ss_pred ----------------HHHHCCe-------EEEEecccccc
Confidence 9999999 99999999875
No 102
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.48 E-value=8.9e-12 Score=138.50 Aligned_cols=339 Identities=13% Similarity=0.006 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHhcc---CccccCChhHHHHHHHHHHHHHHHhCCC-ccccccCcCCCCcEEEcCChHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCL---GFTWASSPACTELEIITMNWLGKMIGLP-EEFLHTKVDSPGGGVLQTTASESTLICLLAGRT 280 (943)
Q Consensus 205 ~silgd~L~~alN~n---~~~~~~SPaateLE~~Vi~wLa~LlG~p-~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~ 280 (943)
+..+.+.+...++.+ ...|...+...+++..+.+|+.+.+|++ .. ....++|+|||+|+..++.+..
T Consensus 60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~--------~~~v~~t~G~~~al~~~~~~l~- 130 (425)
T 1vp4_A 60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLD--------EDNLIFTVGSQQALDLIGKLFL- 130 (425)
T ss_dssp HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCC--------GGGEEEEEHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCC--------cccEEEeccHHHHHHHHHHHhC-
Confidence 344555555555432 1334444456788888888888877854 21 0268999999999987766431
Q ss_pred HHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhcc--CCCcEEE
Q psy11047 281 EAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKK--HLIPFFI 358 (943)
Q Consensus 281 ~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~k--G~~P~~V 358 (943)
.+| -.|++.+-+|.+...++...+.+++.+|.++++ +|+++|+++|+....+ +..+.+|
T Consensus 131 ---------~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v 191 (425)
T 1vp4_A 131 ---------DDE---------SYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFI 191 (425)
T ss_dssp ---------CTT---------CEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ---------CCC---------CEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEE
Confidence 122 246677788999888875444578888887766 9999999999863211 1125565
Q ss_pred -EEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccc
Q psy11047 359 -FSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHL 434 (943)
Q Consensus 359 -VaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~L 434 (943)
+.+...+.+|.+-| +++|.+ +|++||+ |+++|.+|+++ .+.
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~-~~~------- 236 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVE--------------------IAEKYDL-------FIVEDDPYGAL-RYE------- 236 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECSSTTC-BCS-------
T ss_pred EECCCCCCCCCCcCCHHHHHHHHH--------------------HHHHcCC-------EEEEECCCccc-cCC-------
Confidence 46677788898866 567777 9999999 99999999876 320
Q ss_pred ceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCC
Q psy11047 435 GMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENS 511 (943)
Q Consensus 435 g~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~ 511 (943)
|. ....... +. ....+-+..++||+++ .. ...+ ..+..+..-..
T Consensus 237 ------------------------g~-~~~~~~~-~~-~~~~~i~~~s~sK~~~-~G~r~G~~~-----~~~~~~~~l~~ 283 (425)
T 1vp4_A 237 ------------------------GE-TVDPIFK-IG-GPERVVLLNTFSKVLA-PGLRIGMVA-----GSKEFIRKIVQ 283 (425)
T ss_dssp ------------------------SC-CCCCHHH-HH-CTTTEEEEEESTTTTC-GGGCEEEEE-----CCHHHHHHHHH
T ss_pred ------------------------CC-CCcCHHH-hC-CCCCEEEEeccccccc-cccceEEEe-----eCHHHHHHHHH
Confidence 00 0011111 11 1223567789999987 21 1111 01111100000
Q ss_pred CcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCc
Q psy11047 512 GLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFP 591 (943)
Q Consensus 512 g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~ 591 (943)
... .++.. ...+..++....+....+.+.+++..+ .
T Consensus 284 --~~~--~~~~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~-----------------------~------------- 319 (425)
T 1vp4_A 284 --AKQ--SADLC----SPAITHRLAARYLERYDLLEQLKPTIE-----------------------L------------- 319 (425)
T ss_dssp --HHH--HHHSS----CCHHHHHHHHHHHHHSCHHHHTHHHHH-----------------------H-------------
T ss_pred --Hhh--hhcCC----CCHHHHHHHHHHHhcCCHHHHHHHHHH-----------------------H-------------
Confidence 000 00110 123334444444322112223333110 0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHhC-CC---CeEEecCCCccEEEEEecC-CChHHHHHHHHHhccCcEEEeecc-c---
Q psy11047 592 NFILSYFPKFQSVRLAQKFEALVLG-DP---RFEIPAARHLGMVVIRLLG-ENILTEKLLKRLNSKGRLHCVPAS-L--- 662 (943)
Q Consensus 592 ~~~~~~~p~~~~~~LA~~l~~~L~~-~p---~~eIl~~~~l~iV~Fr~~g-~n~l~~~Ll~~L~~~G~~~~s~t~-~--- 662 (943)
..+.++++.+.|++ .| ++++..+...+.+.++++. .+ ..++.+.|.++|. ++.+.. .
T Consensus 320 -----------~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~l~~~l~~~gi-~v~~g~~f~~~ 385 (425)
T 1vp4_A 320 -----------YRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFD--TWEMFEYAKRKKV-FYVPGRVFKVY 385 (425)
T ss_dssp -----------HHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCC--TTTTHHHHHHHTE-ECEEGGGGCTT
T ss_pred -----------HHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCC--HHHHHHHHHHCCC-EEECchhhcCC
Confidence 12445566666655 34 6888766666678888863 22 3467777777775 444422 2
Q ss_pred -CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11047 663 -RIQGLGRAQNFTRTTNDDITRDWNEIRNTATEILAE 698 (943)
Q Consensus 663 -~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ll~~ 698 (943)
.+..++|++++.. ++++++++++.|.++..++.++
T Consensus 386 ~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 386 DEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp CCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence 2457999976654 8999999999999887665443
No 103
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.48 E-value=2e-12 Score=142.68 Aligned_cols=124 Identities=6% Similarity=-0.026 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+++++++|.+ ..+++++||+|+..++.+.. .+| -.|+++..+
T Consensus 64 ~~~~~l~~~la~~~g~~------------~~i~~~sG~~a~~~~l~~~~----------~~g---------d~vi~~~~~ 112 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGE------------AGLATASGISAITTTLLTLC----------QQG---------DHIVSASAI 112 (398)
T ss_dssp HHHHHHHHHHHHHHTCS------------EEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEESSS
T ss_pred hHHHHHHHHHHHHhCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CEEEEcCCC
Confidence 33445667888999875 25788889999988877641 122 247788899
Q ss_pred chHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccc
Q psy11047 311 HSSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLG 386 (943)
Q Consensus 311 HySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~ 386 (943)
|.++..++ ...+..++.++.+ |+++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 113 ~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~-------- 173 (398)
T 2rfv_A 113 YGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAG-------- 173 (398)
T ss_dssp CHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHH--------
T ss_pred cccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH--------
Confidence 99988765 3344578888875 799999888653 678888888899999999999999
Q ss_pred cccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 387 FYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 387 ~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+|+|++|+..
T Consensus 174 ------------l~~~~~~-------~li~De~~~~~ 191 (398)
T 2rfv_A 174 ------------IAHQQGA-------LLVVDNTFMSP 191 (398)
T ss_dssp ------------HHHHTTC-------EEEEECTTTCT
T ss_pred ------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999865
No 104
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.48 E-value=1.9e-12 Score=140.93 Aligned_cols=131 Identities=15% Similarity=0.085 Sum_probs=101.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+..+|...++|. .+++++|.+ .+++|+|||+|+..++.+++- .+| -
T Consensus 31 ~~~~~~~~~l~~----~la~~~~~~------------~~~~~~sGt~al~~al~~~~~---------~~g---------d 76 (367)
T 3nyt_A 31 YILGPEVTELED----RLADFVGAK------------YCISCANGTDALQIVQMALGV---------GPG---------D 76 (367)
T ss_dssp CSSCHHHHHHHH----HHHHHHTCS------------EEEEESCHHHHHHHHHHHTTC---------CTT---------C
T ss_pred ccCChHHHHHHH----HHHHHhCCC------------cEEEeCCHHHHHHHHHHHhCC---------CCc---------C
Confidence 345666666665 557777764 379999999999988876420 122 3
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCCC-CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~-grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
.|+++..+|.++..++...+.+++.++++.+ +.+|+++|+++|+++ +.+|+ .++.+|...|+++|.+
T Consensus 77 ~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~--- 144 (367)
T 3nyt_A 77 EVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINA--- 144 (367)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHH---
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHH---
Confidence 4788899999999988654458889998865 899999999988543 44555 4567899999999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++|+|++++.+
T Consensus 145 -----------------la~~~~~-------~li~D~a~~~g 162 (367)
T 3nyt_A 145 -----------------IASKYGI-------PVIEDAAQSFG 162 (367)
T ss_dssp -----------------HHHHTTC-------CBEEECTTTTT
T ss_pred -----------------HHHHcCC-------EEEEECccccC
Confidence 9999999 99999999744
No 105
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.47 E-value=5e-12 Score=140.43 Aligned_cols=284 Identities=14% Similarity=0.055 Sum_probs=179.3
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++| +.+++++|.+ ..++|+|||+||..++.+.. .+| -.|
T Consensus 64 ~~~~~~~l~----~~la~~~g~~------------~~~~~~sGt~A~~~al~~~~----------~~g---------d~V 108 (392)
T 3qhx_A 64 GNPTRTALE----AALAAVEDAA------------FGRAFSSGMAAADCALRAML----------RPG---------DHV 108 (392)
T ss_dssp CCHHHHHHH----HHHHHHTTCS------------EEEEESSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CChHHHHHH----HHHHHHhCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CEE
Confidence 445555444 5668888874 36899999999988877541 122 247
Q ss_pred EecCCCchHHHHHH-H---HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 305 YCSDQAHSSVEKAG-L---IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 305 ~~S~~aHySv~KAa-~---LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
+++..+|.+....+ . ..+..+..++.+ |+++|+++|+++ +.+|+....++.+|.+.|+++|++
T Consensus 109 i~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~-- 175 (392)
T 3qhx_A 109 VIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQ-- 175 (392)
T ss_dssp EEETTCCHHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH--
T ss_pred EEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHH--
Confidence 78899998877765 2 223477888875 799999998754 677888888999999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCc
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGR 460 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~ 460 (943)
+|++||+ ++|+|.+|+.+ .+
T Consensus 176 ------------------la~~~g~-------~li~D~~~~~~-~~---------------------------------- 195 (392)
T 3qhx_A 176 ------------------LGADSSA-------KVLVDNTFASP-AL---------------------------------- 195 (392)
T ss_dssp ------------------HHHHHTC-------EEEEECTTTCT-TT----------------------------------
T ss_pred ------------------HHHHcCC-------EEEEECCCccc-cc----------------------------------
Confidence 9999999 99999999755 21
Q ss_pred ccccchhhhhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHH
Q psy11047 461 LHCVPASLRIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVI 537 (943)
Q Consensus 461 ~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tL 537 (943)
..... ..+|.++.++||+++... ...+. ..+..+... +..+....+....++..|+.+
T Consensus 196 --~~~~~------~~~di~~~S~sK~lg~~g~~~~G~v~---~~~~~~~~~--------l~~~~~~~g~~~~~~~~~~~~ 256 (392)
T 3qhx_A 196 --QQPLS------LGADVVLHSTTKYIGGHSDVVGGALV---TNDEELDQS--------FAFLQNGAGAVPGPFDAYLTM 256 (392)
T ss_dssp --CCGGG------GTCSEEEEETTTTTTCSSCCCCEEEE---ESCHHHHHH--------HHHHHHHHCCCCCHHHHHHHH
T ss_pred --CChHH------hCCcEEEEcCccccCCCCCceEEEEE---ECcHHHHHH--------HHHHHHhcCCCCCHHHHHHHH
Confidence 11111 146999999999998322 11110 000011000 000000111223455566555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCC
Q psy11047 538 RNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 617 (943)
Q Consensus 538 r~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~ 617 (943)
+.+ +.+...+++ ..+.++++.+.|++.
T Consensus 257 ~~l--~~l~~~~~~---------------------------------------------------~~~~~~~l~~~L~~~ 283 (392)
T 3qhx_A 257 RGL--KTLVLRMQR---------------------------------------------------HSENAAAVAEFLAEH 283 (392)
T ss_dssp HHH--TTHHHHHHH---------------------------------------------------HHHHHHHHHHHHHTC
T ss_pred hhh--hHHHHHHHH---------------------------------------------------HHHHHHHHHHHHhcC
Confidence 432 233333333 345667777788888
Q ss_pred CCeEEecCC-----------------CccEEEEEecCCChHHHHHHHHHhccCc---------EEEeeccc---------
Q psy11047 618 PRFEIPAAR-----------------HLGMVVIRLLGENILTEKLLKRLNSKGR---------LHCVPASL--------- 662 (943)
Q Consensus 618 p~~eIl~~~-----------------~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~---------~~~s~t~~--------- 662 (943)
|.+.-+..| ..++++|.+++.....+.+++.+...|. +.+.+...
T Consensus 284 ~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 363 (392)
T 3qhx_A 284 PAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQ 363 (392)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTB
T ss_pred CCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHH
Confidence 877544222 1568999998743446777777764431 11222111
Q ss_pred --CCCcEEEEeecCCCCHHHHHHHHHHH
Q psy11047 663 --RIQGLGRAQNFTRTTNDDITRDWNEI 688 (943)
Q Consensus 663 --~g~~~lR~v~~~~tt~edId~ll~~I 688 (943)
-....+|++++..++++.|+.+.++|
T Consensus 364 ~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 364 LEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp CCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 13578999999998888888887665
No 106
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.47 E-value=3.2e-12 Score=140.03 Aligned_cols=299 Identities=13% Similarity=-0.029 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
..+.+.+++++|.++ ..++|+| |.+|+.++.+.... .+| -.|+++...|.+
T Consensus 94 ~~l~~~la~~~~~~~-----------~i~~~sG-~~a~~~~~~~l~~~--------~~g---------d~Vl~~~~~~~~ 144 (401)
T 2bwn_A 94 RRLEAEIAGLHQKEA-----------ALVFSSA-YNANDATLSTLRVL--------FPG---------LIIYSDSLNHAS 144 (401)
T ss_dssp HHHHHHHHHHTTCSE-----------EEEESCH-HHHHHHHHHHHHHH--------STT---------CEEEEETTCCHH
T ss_pred HHHHHHHHHHhCCCc-----------EEEECCc-HHHHHHHHHHHhcC--------CCC---------CEEEECchhhHH
Confidence 345667788888653 3556555 55887776543210 122 247778899999
Q ss_pred HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccccc
Q psy11047 314 VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 393 (943)
Q Consensus 314 v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~ 393 (943)
+..++...+..++.++.+ |+++|++.++.... ..+.+|+.+...+.+|.+.|+++|.+
T Consensus 145 ~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~--------------- 202 (401)
T 2bwn_A 145 MIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICD--------------- 202 (401)
T ss_dssp HHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHH---------------
T ss_pred HHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHH---------------
Confidence 999886545578888875 78999999875321 13678888999999999999999999
Q ss_pred CchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCC
Q psy11047 394 TNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGL 473 (943)
Q Consensus 394 RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gi 473 (943)
+|++||+ |+++|++|+.. .+. + .|.-+. . ..++
T Consensus 203 -----l~~~~~~-------~li~Dea~~~g-~~~-~----------------------------~g~~~~-~----~~~~ 235 (401)
T 2bwn_A 203 -----IAEEFGA-------LTYIDEVHAVG-MYG-P----------------------------RGAGVA-E----RDGL 235 (401)
T ss_dssp -----HHHHHTC-------EEEEECTTTTT-TSS-T----------------------------TSCCHH-H----HHTC
T ss_pred -----HHHHcCC-------EEEEecccccc-ccC-C----------------------------CCceee-e----ccCc
Confidence 9999999 99999999843 120 0 000011 0 0122
Q ss_pred -CCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCC-CcchHHHHHHHHHHHHHHHHHHHHH
Q psy11047 474 -GRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSK-RFRALKLWFVIRNFGIKGLQKHIRE 551 (943)
Q Consensus 474 -e~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SR-rfrALklW~tLr~~G~~Gl~~~I~~ 551 (943)
+..|-+..+++|.++......+.. ..-..++..... .+....+- ......+..+++.+...|+.+..++
T Consensus 236 ~~~~~i~~~s~sK~~~~~GG~~~~~--~~~~~~l~~~~~-------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 306 (401)
T 2bwn_A 236 MHRIDIFNGTLAKAYGVFGGYIAAS--ARMVDAVRSYAP-------GFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDA 306 (401)
T ss_dssp GGGCSEEEEESSSTTCSCCEEEEEC--HHHHHHHHHHCH-------HHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred cccCcEEEeechhhccCCCCEEecC--HHHHHHHHHhCc-------CceecCCCCHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 235778889999988432211100 000001110000 00011111 1112222333443322233333333
Q ss_pred HHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEE
Q psy11047 552 IFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 631 (943)
Q Consensus 552 ~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV 631 (943)
..++++++.+.|++. ++++.. +..+++
T Consensus 307 ---------------------------------------------------~~~~~~~l~~~L~~~-g~~~~~-~~~~~~ 333 (401)
T 2bwn_A 307 ---------------------------------------------------QQMHAKVLKMRLKAL-GMPIID-HGSHIV 333 (401)
T ss_dssp ---------------------------------------------------HHHHHHHHHHHHHHH-TCCBCC-CSSSCE
T ss_pred ---------------------------------------------------HHHHHHHHHHHHHHC-CCcccC-CCCCeE
Confidence 234556666666665 677664 456788
Q ss_pred EEEecCCChHHHHHHHHHh-ccCcEEEeeccc----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 632 VIRLLGENILTEKLLKRLN-SKGRLHCVPASL----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 632 ~Fr~~g~n~l~~~Ll~~L~-~~G~~~~s~t~~----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.|++.+ ......+.++|. ++|. ++.+... .+..++|++++..++++||+++++.|+++.++
T Consensus 334 ~~~~~~-~~~~~~~~~~L~~~~gi-~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 334 PVVIGD-PVHTKAVSDMLLSDYGV-YVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp EEECCC-HHHHHHHHHHHHHHHCE-ECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred EEEeCC-hHHHHHHHHHHHhcCCE-EEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 998853 223567888885 6675 4544322 13458999888889999999999999887543
No 107
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.47 E-value=6.6e-12 Score=137.14 Aligned_cols=156 Identities=9% Similarity=-0.070 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
++.+ .+.+...+......|.......+++..+.+++.+.+|++.. ....+||+|||+|+..++.+..
T Consensus 46 ~~~v-~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~--------~~~v~~t~g~~~al~~~~~~l~---- 112 (391)
T 3h14_A 46 PRGA-VEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLD--------PGRVVITPGSSGGFLLAFTALF---- 112 (391)
T ss_dssp CHHH-HHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCC--------GGGEEEESSHHHHHHHHHHHHC----
T ss_pred CHHH-HHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCC--------HHHEEEecChHHHHHHHHHHhc----
Confidence 3444 34455455433333444344678899999999999886532 1368999999999988766531
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCC--CCcCHHHHHHHHHHhhccCCCcEEEEEe
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFIFSG 361 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~--grmD~daLe~aI~~d~~kG~~P~~VVaT 361 (943)
.+| -.|++..-+|.+...++..-+.+++.++.+.+ +.+|+++|+++ .+.+|+.+
T Consensus 113 ------~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~ 168 (391)
T 3h14_A 113 ------DSG---------DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---------DLAGLMVA 168 (391)
T ss_dssp ------CTT---------CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEE
T ss_pred ------CCC---------CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---------CCeEEEEC
Confidence 122 24667788999988888544458888998754 47899998776 15567777
Q ss_pred cCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 362 LALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 362 aGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
...+.+|.+-| +++|++ +|++||+ ++++|.+|+++
T Consensus 169 ~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 206 (391)
T 3h14_A 169 SPANPTGTMLDHAAMGALIE--------------------AAQAQGA-------SFISDEIYHGI 206 (391)
T ss_dssp SSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred CCCCCCCccCCHHHHHHHHH--------------------HHHHcCC-------EEEEECcchhc
Confidence 88889999877 777777 9999999 99999999876
No 108
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.47 E-value=1.6e-12 Score=145.54 Aligned_cols=142 Identities=10% Similarity=-0.079 Sum_probs=93.8
Q ss_pred cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCc
Q psy11047 222 TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 301 (943)
Q Consensus 222 ~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~ 301 (943)
.|...+...+++ +++++++|.+ ..+||+|||+||..|+.+++.+... +|- .+
T Consensus 71 ~y~~~~~~~~l~----~~la~~~~~~------------~v~~t~ggt~A~~~al~~~~~~~~~------~Gd------~~ 122 (467)
T 1ax4_A 71 AYAGSRNYYDLK----DKAKELFNYD------------YIIPAHQGRGAENILFPVLLKYKQK------EGK------AK 122 (467)
T ss_dssp CSSSCHHHHHHH----HHHHHHHCCC------------EEEEESSHHHHHHHHHHHHHHHHHH------TTC------CS
T ss_pred ccccCccHHHHH----HHHHHHcCCC------------cEEEcCCcHHHHHHHHHHHHHhhcc------CCC------cc
Confidence 455556555554 4667777763 4799999999999999988653211 220 11
Q ss_pred eEEEecCCCchHHHH-HHHHCCccEEEEecC----------CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcc-cc
Q psy11047 302 LVAYCSDQAHSSVEK-AGLIGLVNMRYIESD----------DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAF-LV 369 (943)
Q Consensus 302 ~vV~~S~~aHySv~K-Aa~LG~~~v~~Vp~D----------~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~t-Ga 369 (943)
.+|+++ ..||.... +..+.+..++.++.+ .++.+|+++|+++|+... ...+.+|+.+..++.+ |.
T Consensus 123 ~~viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~ 199 (467)
T 1ax4_A 123 NPVFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQ 199 (467)
T ss_dssp SCEEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSB
T ss_pred ceEEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCcc
Confidence 114445 77866544 444444455555432 257899999999998642 0125677776666666 65
Q ss_pred c---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhc
Q psy11047 370 V---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 421 (943)
Q Consensus 370 I---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~G 421 (943)
+ +++++|++ +|++||+ |+|+|++++
T Consensus 200 ~~~~~~l~~i~~--------------------la~~~gi-------~li~De~~~ 227 (467)
T 1ax4_A 200 PVSMSNLKEVYE--------------------IAKQHGI-------FVVMDSARF 227 (467)
T ss_dssp CCCHHHHHHHHH--------------------HHHHHTC-------CEEEECTTH
T ss_pred CCChhHHHHHHH--------------------HHHHcCC-------EEEEEchhh
Confidence 5 56888888 9999999 999998754
No 109
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.47 E-value=1.1e-12 Score=145.09 Aligned_cols=126 Identities=10% Similarity=-0.020 Sum_probs=95.3
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++|. .+++++|.+ ..+++++||+||..++.+.. .+| -.|
T Consensus 63 ~~~~~~~l~~----~la~~~g~~------------~~i~~~sG~~a~~~~l~~~~----------~~g---------d~v 107 (398)
T 1gc0_A 63 SNPTLNLLEA----RMASLEGGE------------AGLALASGMGAITSTLWTLL----------RPG---------DEV 107 (398)
T ss_dssp CCHHHHHHHH----HHHHHHTCS------------EEEEESSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CChHHHHHHH----HHHHHhCCC------------cEEEECCHHHHHHHHHHHHh----------cCC---------CEE
Confidence 4455555554 667888875 35788888999988877641 122 247
Q ss_pred EecCCCchHHHHHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 305 YCSDQAHSSVEKAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 305 ~~S~~aHySv~KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
+++...|.+...++. ..+..++.++.+ |+++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 108 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~-- 174 (398)
T 1gc0_A 108 LLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAK-- 174 (398)
T ss_dssp EEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH--
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHH--
Confidence 788899999877652 223467777763 799999988753 678888888899999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+|+|++|+.+
T Consensus 175 ------------------l~~~~~~-------~li~D~~~~~~ 192 (398)
T 1gc0_A 175 ------------------IARKHGA-------TVVVDNTYCTP 192 (398)
T ss_dssp ------------------HHGGGTC-------EEEEECTTTHH
T ss_pred ------------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999754
No 110
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.46 E-value=4.2e-12 Score=137.68 Aligned_cols=149 Identities=10% Similarity=-0.052 Sum_probs=110.2
Q ss_pred HHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhc
Q psy11047 208 LGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQ 287 (943)
Q Consensus 208 lgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~ 287 (943)
+.+.+...+......|...+...+++..+.+|+.+..|++.. ....++|+|||+|+..++.+..
T Consensus 47 v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~--------~~~v~~~~g~~~a~~~~~~~~~-------- 110 (370)
T 2z61_A 47 IVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADII--------PDNIIITGGSSLGLFFALSSII-------- 110 (370)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCC--------GGGEEEESSHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCC--------hhhEEECCChHHHHHHHHHHhc--------
Confidence 344454444433333444445678999999999988886532 1368999999999988877531
Q ss_pred ccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcc
Q psy11047 288 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAF 367 (943)
Q Consensus 288 ~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~t 367 (943)
.+| -.|++++-+|.++..++..-+..++.++ +|+++|+++++++ +.+|+.+..++.+
T Consensus 111 --~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~~------~~~v~~~~p~npt 167 (370)
T 2z61_A 111 --DDG---------DEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSDK------TKAIIINSPSNPL 167 (370)
T ss_dssp --CTT---------CEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCSS------EEEEEEESSCTTT
T ss_pred --CCC---------CEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcccC------ceEEEEcCCCCCc
Confidence 122 2467788899999888854344677776 7899999888642 5567777788889
Q ss_pred cccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 368 LVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 368 GaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|.+-|++ |.+ +|++||+ ++++|.+|+.+
T Consensus 168 G~~~~~~-l~~--------------------~~~~~~~-------~li~De~~~~~ 195 (370)
T 2z61_A 168 GEVIDRE-IYE--------------------FAYENIP-------YIISDEIYNGL 195 (370)
T ss_dssp CCCCCHH-HHH--------------------HHHHHCS-------EEEEECTTTTC
T ss_pred CcccCHH-HHH--------------------HHHHcCC-------EEEEEcchhhc
Confidence 9999999 999 9999999 99999999876
No 111
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.46 E-value=2.1e-11 Score=133.58 Aligned_cols=330 Identities=11% Similarity=-0.008 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHhcc---CccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCL---GFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTE 281 (943)
Q Consensus 205 ~silgd~L~~alN~n---~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~ 281 (943)
+..+.+.+...+... ...|...+...+++.. +++++|.+.+ ..++|+|||+++..++.+..
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~g~~~~----------~v~~~~g~~~al~~~~~~~~-- 112 (397)
T 2zyj_A 49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAF----VAEWIGVRPE----------EVLITTGSQQALDLVGKVFL-- 112 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH----HHHHHTSCGG----------GEEEESHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH----HHHHhCCChh----------hEEEeccHHHHHHHHHHHhC--
Confidence 344445554444321 1233333344555554 4555576543 68999999999987776531
Q ss_pred HHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEE-EE
Q psy11047 282 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFI-FS 360 (943)
Q Consensus 282 ~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~V-Va 360 (943)
.+| -.|++..-+|.+...++...+.+++.+|.++++ +|+++|+++|+.. .+.+| +.
T Consensus 113 --------~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~-----~~~~v~~~ 169 (397)
T 2zyj_A 113 --------DEG---------SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKRE-----RPRFLYLI 169 (397)
T ss_dssp --------CTT---------CEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHC-----CCSCEEEC
T ss_pred --------CCC---------CEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhhc-----CCeEEEEC
Confidence 122 236667788998888875444578888887666 9999999999862 13344 44
Q ss_pred ecCCCcccccccH---HHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccccee
Q psy11047 361 GLALPAFLVVDSY---CCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 437 (943)
Q Consensus 361 TaGTT~tGaIDpL---~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~V 437 (943)
+...+.+|.+-|. ++|.+ +|++||+ |+++|.+|+++ .+.
T Consensus 170 ~~~~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~-~~~---------- 211 (397)
T 2zyj_A 170 PSFQNPTGGLTPLPARKRLLQ--------------------MVMERGL-------VVVEDDAYREL-YFG---------- 211 (397)
T ss_dssp CBSCTTTCCBCCHHHHHHHHH--------------------HHHHHTC-------CEEEECTTTTC-BCS----------
T ss_pred CCCcCCCCCcCCHHHHHHHHH--------------------HHHHcCC-------EEEEeCCcccc-cCC----------
Confidence 5667778888664 47777 9999999 99999999876 320
Q ss_pred eeeecchhhhHHHHHHHhhccCcccccchhhh-hcCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCcc
Q psy11047 438 VIRLLGENILTEKLLKRLNSKGRLHCVPASLR-IQGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLA 514 (943)
Q Consensus 438 cFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~-l~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~ 514 (943)
|... ...... ......-.-+..++||+++ +|-...+ ..+..+..-.. .
T Consensus 212 ---------------------g~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~-----~~~~~~~~l~~--~ 262 (397)
T 2zyj_A 212 ---------------------EARL-PSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAV-----AHPEALQKLVQ--A 262 (397)
T ss_dssp ---------------------SCCC-CCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEE-----CCHHHHHHHHH--H
T ss_pred ---------------------CCCC-CchhhhCcccCCCeEEEEecccccccccceeEEEe-----cCHHHHHHHHH--H
Confidence 0000 011111 0000011356788999998 1111111 00111100000 0
Q ss_pred cccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccc
Q psy11047 515 IDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFI 594 (943)
Q Consensus 515 ~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~ 594 (943)
.. .++... ..+..++....+-...+ +.+++..+ .
T Consensus 263 ~~--~~~~~~----~~~~~~a~~~~l~~~~~-~~~~~~~~-----------------------~---------------- 296 (397)
T 2zyj_A 263 KQ--GADLHT----PMLNQMLVHELLKEGFS-ERLERVRR-----------------------V---------------- 296 (397)
T ss_dssp HH--HHHSSC----CHHHHHHHHHHHTTTHH-HHHHHHHH-----------------------H----------------
T ss_pred HH--hhcCCC----CHHHHHHHHHHHHhCCH-HHHHHHHH-----------------------H----------------
Confidence 00 001101 12222222222211112 22333110 0
Q ss_pred cccCCcHHHHHHHHHHHHHHhC-CC-CeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeec-cc----CCCcE
Q psy11047 595 LSYFPKFQSVRLAQKFEALVLG-DP-RFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPA-SL----RIQGL 667 (943)
Q Consensus 595 ~~~~p~~~~~~LA~~l~~~L~~-~p-~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t-~~----~g~~~ 667 (943)
..+.++++.+.|++ .| ++++..+...+.+.+++... ....++.++|.++|. ++.+. .. .+..+
T Consensus 297 --------~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi-~v~~g~~f~~~~~~~~~ 366 (397)
T 2zyj_A 297 --------YREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKG-LSAEGLFRRALEENV-AFVPGGPFFANGGGENT 366 (397)
T ss_dssp --------HHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTT-CCHHHHHHHHHHTTE-EEEESGGGCTTSCCTTE
T ss_pred --------HHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCC-CCHHHHHHHHHHCCC-EEechHHhcCCCCCCCe
Confidence 23455666777765 57 58887666667778887531 124678888888875 44432 22 24579
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHHHHH
Q psy11047 668 GRAQNFTRTTNDDITRDWNEIRNTATEILA 697 (943)
Q Consensus 668 lR~v~~~~tt~edId~ll~~I~~~~~~ll~ 697 (943)
+|++++.. ++++|+++++.|.++.+++++
T Consensus 367 iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 367 LRLSYATL-DREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp EEEECSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 99976654 899999999999988776653
No 112
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.46 E-value=1e-11 Score=135.65 Aligned_cols=156 Identities=6% Similarity=-0.122 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhccCccccCChhHHH-HHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHh
Q psy11047 207 LLGDMLSDAINCLGFTWASSPACTE-LEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRK 285 (943)
Q Consensus 207 ilgd~L~~alN~n~~~~~~SPaate-LE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~ 285 (943)
.+.+.+...++.....|... ..+ ++..+.+|+.+.+|++.. ....++|+|||+|+..++.+..
T Consensus 45 ~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~--------~~~v~~t~g~~~al~~~~~~l~------ 108 (390)
T 1d2f_A 45 CIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAID--------SQTVVYGPSVIYMVSELIRQWS------ 108 (390)
T ss_dssp HHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCC--------GGGEEEESCHHHHHHHHHHHSS------
T ss_pred HHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCC--------HHHEEEcCCHHHHHHHHHHHhc------
Confidence 34455555554322333322 556 888888999888885422 1268999999999987766431
Q ss_pred hcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCC---CCcCHHHHHHHHHHhhccCCCcEEEEEec
Q psy11047 286 YQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFIFSGL 362 (943)
Q Consensus 286 ~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~---grmD~daLe~aI~~d~~kG~~P~~VVaTa 362 (943)
.+| -.|++..-+|.+...++...+.+++.+|.+.+ +.+|+++|+++|+.. .+.+|+.+.
T Consensus 109 ----~~g---------d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~ 170 (390)
T 1d2f_A 109 ----ETG---------EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCS 170 (390)
T ss_dssp ----CTT---------CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEES
T ss_pred ----CCC---------CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeC
Confidence 122 24666778899988888544447888887643 369999999998642 256667677
Q ss_pred CCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 363 ALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 363 GTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
..+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 171 p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 207 (390)
T 1d2f_A 171 PQNPTGKVWTCDELEIMAD--------------------LCERHGV-------RVISDEIHMDM 207 (390)
T ss_dssp SCTTTCCCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred CCCCCCcCcCHHHHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 7888998866 788888 9999999 99999999876
No 113
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.46 E-value=2.3e-12 Score=138.72 Aligned_cols=329 Identities=8% Similarity=-0.022 Sum_probs=185.8
Q ss_pred CCceeEEccCCCChHHHHHHHHHHHH-hccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHH
Q psy11047 191 SPYMHAYFPALNSYPSLLGDMLSDAI-NCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASE 269 (943)
Q Consensus 191 sPrf~g~~~~~~s~~silgd~L~~al-N~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTe 269 (943)
+-.|+|.-+.+ ..+..+.+++.... ......|..+|...++| +++++++|.+ ..++++|||+
T Consensus 11 ~~~~l~~~~~p-~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~------------~~i~~~~G~~ 73 (357)
T 3lws_A 11 QTTGQISGHGK-RNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMD------------DAVFFPSGTM 73 (357)
T ss_dssp TCSEESSBSSC-CBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCS------------EEEEESCHHH
T ss_pred hhcccccCCCC-CCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCC------------cEEEecCcHH
Confidence 44555544333 34555555554321 11122344456666665 4678888874 3578899999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHH---HHHCCccEEEEecCCCCCcCHHHHHHHHH
Q psy11047 270 STLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA---GLIGLVNMRYIESDDKLSLRGDKLIEAIE 346 (943)
Q Consensus 270 ANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KA---a~LG~~~v~~Vp~D~~grmD~daLe~aI~ 346 (943)
|+..++.+.... | .+.+|+++...|++..++ +.+.+..++.++. +++.+|+++|+++.
T Consensus 74 a~~~al~~~~~~----------g-------d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~~- 134 (357)
T 3lws_A 74 AQQVALRIWSDE----------T-------DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKALP- 134 (357)
T ss_dssp HHHHHHHHHHHH----------H-------TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTCC-
T ss_pred HHHHHHHHHhhc----------C-------CCcEEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcCc-
Confidence 999887765421 1 122577888899987663 2455557777775 56889999998762
Q ss_pred HhhccCCCcEEEEEecCCCcc-ccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 347 RDKKKHLIPFFIFSGLALPAF-LVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 347 ~d~~kG~~P~~VVaTaGTT~t-GaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
+ +.+|+.+..++.+ |.+-| +++|.+ +|++||+ |+|+|+||..
T Consensus 135 -~------~~~v~~~~p~np~~G~~~~~~~l~~i~~--------------------~~~~~~~-------~li~D~a~~~ 180 (357)
T 3lws_A 135 -D------IACLLLELPQREIGGVAPAFSELETISR--------------------YCRERGI-------RLHLDGARLF 180 (357)
T ss_dssp -S------CSEEEEESSBGGGTSBCCCHHHHHHHHH--------------------HHHHTTC-------EEEEEETTHH
T ss_pred -C------cceEEEEcccccCCceeCCHHHHHHHHH--------------------HHHHcCC-------EEEEECchhh
Confidence 1 3445555554454 77655 778888 9999999 9999998752
Q ss_pred CCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccC
Q psy11047 423 DPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVE 502 (943)
Q Consensus 423 ~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~ 502 (943)
. .. .. .-....... ..+|.+++++||+++......+. .+
T Consensus 181 ~-~~--~~-------------------------------~~~~~~~~~---~~~d~~~~s~sK~~~~~~gg~~~----~~ 219 (357)
T 3lws_A 181 E-ML--PY-------------------------------YEKTAAEIA---GLFDSIYISFYKGLGGIAGAILA----GP 219 (357)
T ss_dssp H-HH--HH-------------------------------HTCCHHHHH---TTSSEEEEESSSTTCCSSCEEEE----EC
T ss_pred h-hh--hh-------------------------------cCCChHHHH---hcCCEEEEeccccCCCCceEEEE----cC
Confidence 1 00 00 000111111 34689999999998421111110 01
Q ss_pred ccccccCCCCcccccCccccC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhccccc
Q psy11047 503 PLYLRHENSGLAIDYMHWQIP-LSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGF 581 (943)
Q Consensus 503 p~YL~~~~~g~~~d~~~~tie-~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~ 581 (943)
+.++..-. ... .... ..+.... +...+..++...++++ ++
T Consensus 220 ~~~~~~~~-----~~~-~~~~~~~~~~~~------~~~~~~~~l~~~~~~~-----------------------~~---- 260 (357)
T 3lws_A 220 AAFCQTAR-----IWK-RRYGGDLISLYP------YIVSADYYYELRKDRM-----------------------GQ---- 260 (357)
T ss_dssp HHHHHHHH-----HHH-HHTTCCCSCCHH------HHHHHHHHHHHHTTCH-----------------------HH----
T ss_pred HHHHHHHH-----HHH-HHhcCCcccchH------HHHHHHHHHHHHHHHH-----------------------HH----
Confidence 11110000 000 0000 0000111 1111222233221110 00
Q ss_pred ccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEe-cCCCccEEEEEecCCC-hHHHHHHHHHhccCcEEEee
Q psy11047 582 YKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIP-AARHLGMVVIRLLGEN-ILTEKLLKRLNSKGRLHCVP 659 (943)
Q Consensus 582 ~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl-~~~~l~iV~Fr~~g~n-~l~~~Ll~~L~~~G~~~~s~ 659 (943)
..+.++++.+.|++.|++++. .++..+++.+++.+.. .....+.+.|.++|.+ +.+
T Consensus 261 ---------------------~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~ 318 (357)
T 3lws_A 261 ---------------------YYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLG-FVG 318 (357)
T ss_dssp ---------------------HHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEE-SCS
T ss_pred ---------------------HHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeE-Eec
Confidence 245677888899999999984 6788999999987542 2246778888888853 433
Q ss_pred ccc--CCCcEEEEeecCC---CCHHHHHHHHHHHHHH
Q psy11047 660 ASL--RIQGLGRAQNFTR---TTNDDITRDWNEIRNT 691 (943)
Q Consensus 660 t~~--~g~~~lR~v~~~~---tt~edId~ll~~I~~~ 691 (943)
... .+..++|+.++.. .+.+++++.++.|.+.
T Consensus 319 g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 319 YLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp CCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 211 3455899955433 5777888877776653
No 114
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.45 E-value=1.6e-11 Score=135.20 Aligned_cols=141 Identities=9% Similarity=-0.030 Sum_probs=102.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHh------CCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhh
Q psy11047 223 WASSPACTELEIITMNWLGKMI------GLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHA 296 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~Ll------G~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~ 296 (943)
|.......+++..+.+|+.+.+ |++.. ....++|+|||+|+..++.+.. .+|
T Consensus 71 y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~--------~~~v~~~~g~~~al~~~~~~l~----------~~g---- 128 (416)
T 1bw0_A 71 YFPTVGSPEAREAVATWWRNSFVHKEELKSTIV--------KDNVVLCSGGSHGILMAITAIC----------DAG---- 128 (416)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC--------GGGEEEESHHHHHHHHHHHHHC----------CTT----
T ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC--------cceEEEeCChHHHHHHHHHHhC----------CCC----
Confidence 3333345778888888877433 32211 1368999999999987776531 122
Q ss_pred hcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc--
Q psy11047 297 EINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS-- 372 (943)
Q Consensus 297 ~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp-- 372 (943)
-.|++++-+|.++..++...+.+++.++.+. .+.+|+++|+++++.. +.+++.+...+.+|.+-|
T Consensus 129 -----d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~ 197 (416)
T 1bw0_A 129 -----DYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRK 197 (416)
T ss_dssp -----CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHH
T ss_pred -----CEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHH
Confidence 2466777789888887754444778888754 3679999999988643 456666677888999988
Q ss_pred -HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 -YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 -L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|+.+
T Consensus 198 ~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 222 (416)
T 1bw0_A 198 HVEDIVR--------------------LAEELRL-------PLFSDEIYAGM 222 (416)
T ss_dssp HHHHHHH--------------------HHHHHTC-------CEEEECTTTTC
T ss_pred HHHHHHH--------------------HHHHcCC-------EEEEEcccccc
Confidence 888888 9999999 99999999875
No 115
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.45 E-value=3.6e-13 Score=154.06 Aligned_cols=141 Identities=14% Similarity=0.031 Sum_probs=95.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|..++...++|..+++++++++|.+.+.. ...++.++|+++|+.++.+. + .|| -
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~~-------~~~V~~~sGs~an~~~~~al----l------~pG---------D 135 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQCW-------GVNVQPYSGSPANFAVYTAL----V------EPH---------G 135 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTTE-------EEECCCSSHHHHHHHHHHHH----T------CTT---------C
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCcccC-------ceEEEECCcHHHHHHHHHHh----c------CCC---------C
Confidence 44567788999999999999999974300 01245555558887766542 1 133 2
Q ss_pred EEEecCCCchHHHHHH---------HHCC-ccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc
Q psy11047 303 VAYCSDQAHSSVEKAG---------LIGL-VNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD 371 (943)
Q Consensus 303 vV~~S~~aHySv~KAa---------~LG~-~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID 371 (943)
.|++++.+|.+....+ ..|. ...+.++++ +++.+|+++|++++++. .|.+|++ ..++.+ .+.
T Consensus 136 ~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~ 208 (483)
T 1rv3_A 136 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNL 208 (483)
T ss_dssp EEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCC
T ss_pred EEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcC
Confidence 4667777776654321 1221 234444446 67999999999999843 1566666 444444 888
Q ss_pred cHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 372 SYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 372 pL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|+++|++ +|+++|+ |+++|+|++..
T Consensus 209 dl~~i~~--------------------ia~~~g~-------~livD~ah~~g 233 (483)
T 1rv3_A 209 DYGRLRK--------------------IADENGA-------YLMADMAHISG 233 (483)
T ss_dssp CHHHHHH--------------------HHHHTTC-------EEEEECTTTHH
T ss_pred CHHHHHH--------------------HHHHcCC-------EEEEEccchhc
Confidence 9999999 9999999 99999997643
No 116
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.45 E-value=3.8e-11 Score=137.74 Aligned_cols=167 Identities=7% Similarity=-0.120 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHhc---cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINC---LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRT 280 (943)
Q Consensus 204 ~~silgd~L~~alN~---n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~ 280 (943)
++.++.......-+. ....|..++...++...+.+|+.+..|++... ...++|+|||+++..++.+..
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--------~~i~~t~G~~~al~~~~~~l~- 178 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA--------DDIFLTDGASPGVHLMMQLLI- 178 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG--------GGEEEESSSHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc--------ccEEEcCCHHHHHHHHHHHHc-
Confidence 344554443333332 23456666677889999999999998876331 368999999999987766421
Q ss_pred HHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCC--CCcCHHHHHHHHHHhhccCCCcEEE
Q psy11047 281 EAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFI 358 (943)
Q Consensus 281 ~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~--grmD~daLe~aI~~d~~kG~~P~~V 358 (943)
..+ .-.|++++-+|.++..++.+.+.+++.++++++ +.+|+++|+++|+....+|..+.+|
T Consensus 179 --------~~~---------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~i 241 (500)
T 3tcm_A 179 --------RNE---------KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRAL 241 (500)
T ss_dssp --------CST---------TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred --------CCC---------CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEE
Confidence 012 235788889999998888654458888888754 5999999999999876666567788
Q ss_pred EEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 359 FSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 359 VaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+...+.+|.+-+ +.+|.+ +|++||+ ++++|.+|+..
T Consensus 242 vl~~p~NPtG~~~s~~~l~~i~~--------------------la~~~~~-------~li~Deay~~~ 282 (500)
T 3tcm_A 242 VVINPGNPTGQVLAEENQYDIVK--------------------FCKNEGL-------VLLADEVYQEN 282 (500)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred EEECCCCCCcccCCHHHHHHHHH--------------------HHHHcCC-------EEEEecCcccc
Confidence 88888888999855 666666 8999999 99999999876
No 117
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.44 E-value=1.2e-11 Score=138.56 Aligned_cols=125 Identities=10% Similarity=0.033 Sum_probs=94.8
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++|. .+++++|.+. .+++++||+||..++.+.. .+| -.|
T Consensus 56 ~~~~~~~l~~----~la~~~g~~~------------~v~~~sGt~A~~~~l~~~~----------~~g---------d~v 100 (421)
T 2ctz_A 56 MNPTVDVLEK----RLAALEGGKA------------ALATASGHAAQFLALTTLA----------QAG---------DNI 100 (421)
T ss_dssp BCHHHHHHHH----HHHHHHTCSE------------EEEESSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CChHHHHHHH----HHHHHhCCCc------------eEEecCHHHHHHHHHHHHh----------CCC---------CEE
Confidence 4455555554 5678888752 4677778999988877531 122 347
Q ss_pred EecCCCchHHHHHH----HHCCccEEEE-ecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhh
Q psy11047 305 YCSDQAHSSVEKAG----LIGLVNMRYI-ESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 305 ~~S~~aHySv~KAa----~LG~~~v~~V-p~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
+++..+|.+...++ ...+..++.+ +.+ |+++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~- 168 (421)
T 2ctz_A 101 VSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQ- 168 (421)
T ss_dssp EECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH-
T ss_pred EEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHH-
Confidence 88999999988775 2334477777 654 799999988753 678888888999999999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhh-cC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALV-LG 422 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~-GG 422 (943)
+|++||+ ++++|++| +.
T Consensus 169 -------------------~a~~~g~-------~livD~~~~~~ 186 (421)
T 2ctz_A 169 -------------------AAREKGV-------ALIVDNTFGMG 186 (421)
T ss_dssp -------------------HHHHHTC-------EEEEECGGGGG
T ss_pred -------------------HHHHcCC-------EEEEECCcccc
Confidence 9999999 99999999 53
No 118
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.44 E-value=3.7e-12 Score=147.24 Aligned_cols=332 Identities=12% Similarity=0.062 Sum_probs=177.2
Q ss_pred hHHHHHHHHHHHHhccCc------cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGF------TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLA 277 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~------~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~a 277 (943)
.+.++..|...+.|..+. .+...+...++|..+++++++++|.+.... +.-++++|||+||+.++.+
T Consensus 67 ~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~-------~~~v~~~sGt~An~~al~a 139 (490)
T 2a7v_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQW-------GVNVQPYSGSPANLAVYTA 139 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTE-------EEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccC-------ceEEeCCchHHHHHHHHHH
Confidence 455555554444454421 123345567999999999999999976310 0135677999999988775
Q ss_pred HHHHHHHhhcccCCCchhhhcCCceEEEecCCCch------HHHH--HHHH-CC-ccEEEEecC-CCCCcCHHHHHHHHH
Q psy11047 278 GRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS------SVEK--AGLI-GL-VNMRYIESD-DKLSLRGDKLIEAIE 346 (943)
Q Consensus 278 AR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy------Sv~K--Aa~L-G~-~~v~~Vp~D-~~grmD~daLe~aI~ 346 (943)
. + .|| -.|+++...|. ++.. ++.+ |. ..+..+++| ++|.+|+++|++.+.
T Consensus 140 l----~------~pG---------D~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~ 200 (490)
T 2a7v_A 140 L----L------QPH---------DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTAR 200 (490)
T ss_dssp H----C------CSC---------EECCC-------------------------------CCBCTTTCSBCHHHHHHHHH
T ss_pred H----c------CCC---------CEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHh
Confidence 3 1 233 23555555553 3222 2222 32 123344555 579999999999997
Q ss_pred HhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcc
Q psy11047 347 RDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRF 426 (943)
Q Consensus 347 ~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~af 426 (943)
... |.+|++ +.+..|.+.|+++|++ +|++||+ ++|+|+|++.. .+
T Consensus 201 ~~~-----~klIi~--~~s~~~~~~dl~~i~~--------------------ia~~~g~-------~livD~Ah~~g-lv 245 (490)
T 2a7v_A 201 LFR-----PRLIIA--GTSAYARLIDYARMRE--------------------VCDEVKA-------HLLADMAHISG-LV 245 (490)
T ss_dssp HHC-----CSEEEE--CCSSCCSCCCHHHHHH--------------------HHHHTTC-------EEEEECGGGHH-HH
T ss_pred hcC-----CcEEEE--cCCCCCCcccHHHHHH--------------------HHHHcCC-------EEEEccccccc-cc
Confidence 542 445543 4455677788999999 9999999 99999997543 11
Q ss_pred ccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccC----
Q psy11047 427 EIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVE---- 502 (943)
Q Consensus 427 eLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~---- 502 (943)
. .| ..+. .+ +.+|.+++++||+|+-...+.+.. +..
T Consensus 246 --~----------------------------~g--~~~~---~~---~~aDiv~~S~hK~l~Gp~GG~i~~--~~~~~~~ 285 (490)
T 2a7v_A 246 --A----------------------------AK--VIPS---PF---KHADIVTTTTHKTLRGARSGLIFY--RKGVKAV 285 (490)
T ss_dssp --H----------------------------TT--SSCC---GG---GTCSEEEEESSGGGCSCSCEEEEE--ECSEEEE
T ss_pred --c----------------------------CC--cCCC---CC---CCCCEEEECCcccCccccchheee--ccchhcc
Confidence 0 00 0110 11 257999999999885222222210 000
Q ss_pred -c-----c-c-cccCCCCcccccC-ccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccch
Q psy11047 503 -P-----L-Y-LRHENSGLAIDYM-HWQIPLSKRFRAL-KLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGT 572 (943)
Q Consensus 503 -p-----~-Y-L~~~~~g~~~d~~-~~tie~SRrfrAL-klW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~ 572 (943)
+ . | +.. .++.. ..+.+++-....+ .+-.+++..-...+.++.++
T Consensus 286 ~~~~~~~~~~~l~~-----~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~--------------------- 339 (490)
T 2a7v_A 286 DPKTGREIPYTFED-----RINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQ--------------------- 339 (490)
T ss_dssp ETTTEEEEECCCHH-----HHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHH---------------------
T ss_pred cccccchhhHHHHH-----HHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHH---------------------
Confidence 0 0 0 000 00000 0112222211111 11111111111122222222
Q ss_pred hhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEec-CCCccEEEEEecCCChHHHHHHHHHhc
Q psy11047 573 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPA-ARHLGMVVIRLLGENILTEKLLKRLNS 651 (943)
Q Consensus 573 ~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~-~~~l~iV~Fr~~g~n~l~~~Ll~~L~~ 651 (943)
..++++++++.|.+. ++++.. ....+++.+.+.+...-...+.+.|.+
T Consensus 340 ------------------------------~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~ 388 (490)
T 2a7v_A 340 ------------------------------VLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLEL 388 (490)
T ss_dssp ------------------------------HHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHH
T ss_pred ------------------------------HHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHh
Confidence 356788888888875 899875 345678888775432124567777877
Q ss_pred cCcEEEeecccC------CCcEEEE----eecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 652 KGRLHCVPASLR------IQGLGRA----QNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 652 ~G~~~~s~t~~~------g~~~lR~----v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.|. .+....+. ...-+|+ +++...+++|++++.+.|.++...
T Consensus 389 ~GI-~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 389 VSI-TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp TTE-ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCe-EEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 775 45422111 2457999 446678999999999999888654
No 119
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.43 E-value=8.2e-12 Score=138.29 Aligned_cols=156 Identities=10% Similarity=-0.025 Sum_probs=112.9
Q ss_pred HHHHHHHHHhc---cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCC-cEEEcCChHHHHHHHHHHHHHHHH
Q psy11047 208 LGDMLSDAINC---LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPG-GGVLQTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 208 lgd~L~~alN~---n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~-~GvfTsGGTeANL~AL~aAR~~~l 283 (943)
+.+.+...++. ....|.......+++..+.+|+.+.+|.+.. .. ..+||+|||+|+..++.+..
T Consensus 55 v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~--------~~~~v~~~~g~~~a~~~~~~~~~---- 122 (429)
T 1yiz_A 55 ALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN--------PMTEVLVTVGAYEALYATIQGHV---- 122 (429)
T ss_dssp HHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC--------TTTSEEEESHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC--------CcCCEEEecChHHHHHHHHHHhc----
Confidence 34555555543 1223333334678888999999998886532 13 68999999999988877531
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC----------CCCcCHHHHHHHHHHhhccCC
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD----------KLSLRGDKLIEAIERDKKKHL 353 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~----------~grmD~daLe~aI~~d~~kG~ 353 (943)
.+| -.|+++.-+|.+...++...+.+++.+|.+. ++.+|+++|+++|+.+
T Consensus 123 ------~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----- 182 (429)
T 1yiz_A 123 ------DEG---------DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK----- 182 (429)
T ss_dssp ------CTT---------CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT-----
T ss_pred ------CCC---------CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccC-----
Confidence 122 2366677788888877754445788888865 4679999999988632
Q ss_pred CcEEEEEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 354 IPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 354 ~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|+.+...+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 183 -~~~v~~~~p~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 227 (429)
T 1yiz_A 183 -TKMIIINTPHNPLGKVMDRAELEVVAN--------------------LCKKWNV-------LCVSDEVYEHM 227 (429)
T ss_dssp -EEEEEEESSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred -ceEEEECCCCCCCCccCCHHHHHHHHH--------------------HHHHcCc-------EEEEecccccc
Confidence 566777777888998865 888888 9999999 99999999876
No 120
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.43 E-value=7.9e-12 Score=136.58 Aligned_cols=142 Identities=12% Similarity=-0.057 Sum_probs=107.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|...+...++...+.+|+++.+|++.. ....++|+|||+|+..++.+.. .+| +-
T Consensus 72 y~~~~g~~~lr~~la~~l~~~~g~~~~--------~~~i~~~~g~~~al~~~~~~l~----------~~g--------~d 125 (398)
T 3ele_A 72 YTSAQGDVETRAAIAEFLNNTHGTHFN--------ADNLYMTMGAAASLSICFRALT----------SDA--------YD 125 (398)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCC--------GGGEEEESSHHHHHHHHHHHHC----------CST--------TC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCC--------hHHEEEccCHHHHHHHHHHHHc----------CCC--------CC
Confidence 433444578889999999999996532 1368999999999988876531 121 02
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhh
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGT 378 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~ 378 (943)
.|++..-+|.++..++...+.+++.+|.+. .+.+|+++|+++++.+ +.+|+.+...+.+|.+-| +.+|++
T Consensus 126 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~ 199 (398)
T 3ele_A 126 EFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSD 199 (398)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 466778889998888865445888999875 5689999999988643 567777788888999877 555666
Q ss_pred hccccccccccccccCchHHHHHH------cCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILS------YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~------~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ ||+ ++++|.+|+.+
T Consensus 200 --------------------~~~~~~~~~~~~~-------~li~De~~~~~ 223 (398)
T 3ele_A 200 --------------------LLEKKSKEIGRPI-------FIIADEPYREI 223 (398)
T ss_dssp --------------------HHHHHHHHHTSCC-------EEEEECTTTTC
T ss_pred --------------------HHHhhhhccCCCe-------EEEEecccccc
Confidence 8988 999 99999999876
No 121
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.43 E-value=4e-11 Score=129.50 Aligned_cols=287 Identities=10% Similarity=-0.047 Sum_probs=176.4
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|+++.-+|.++
T Consensus 69 ~lr~~la~~~~~~~~----------~v~~~~g~~~a~~~~~~~l~----------~~g---------d~vl~~~~~~~~~ 119 (365)
T 3get_A 69 ELKSTLAQKYKVQNE----------NIIIGAGSDQVIEFAIHSKL----------NSK---------NAFLQAGVTFAMY 119 (365)
T ss_dssp HHHHHHHHHHTCCGG----------GEEEESSHHHHHHHHHHHHC----------CTT---------CEEEECSSCCTHH
T ss_pred HHHHHHHHHhCCCcc----------eEEECCCHHHHHHHHHHHHh----------CCC---------CEEEEeCCChHHH
Confidence 456677888888654 68999999999987766421 122 2467788899999
Q ss_pred HHHHHHCCccEEEEec-CCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccccc
Q psy11047 315 EKAGLIGLVNMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 393 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~-D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~ 393 (943)
..++...+.+++.++. ++++ +|+++|+++++.+ +.+|+.+..++.+|.+-|++++.+
T Consensus 120 ~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~--------------- 177 (365)
T 3get_A 120 EIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATE--------------- 177 (365)
T ss_dssp HHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHH---------------
T ss_pred HHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHH---------------
Confidence 8888543347888887 6788 9999999998743 667777888889999999888888
Q ss_pred CchHHHHH--HcCCCCCccchhhhHHhhhcCCCcc--ccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhh
Q psy11047 394 TNFPNFIL--SYFPKFQSVRLAQKFEALVLGDPRF--EIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLR 469 (943)
Q Consensus 394 RrfR~iar--~~Gl~~~~l~lwLHVDAA~GG~~af--eLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~ 469 (943)
+++ ++|+ ++++|.+|+.+ .+ . ... ..+ ....
T Consensus 178 -----l~~~~~~~~-------~li~De~~~~~-~~~~~--~~~-----------------------------~~~-~~~~ 212 (365)
T 3get_A 178 -----FIKGVNEDC-------LVVIDAAYNEF-ASFKD--SKK-----------------------------HLE-PCEL 212 (365)
T ss_dssp -----HHHTSCTTS-------EEEEECTTHHH-HHHHC--GGG-----------------------------CCC-HHHH
T ss_pred -----HHHhCCCCc-------EEEEeCccHHH-hcccC--Ccc-----------------------------ccc-HhHH
Confidence 776 6799 99999998754 10 0 000 000 0011
Q ss_pred hcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHH
Q psy11047 470 IQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGL 545 (943)
Q Consensus 470 l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl 545 (943)
+. ....+-+..++||+++... ...+ .++..+..-... ...|+ ...+..++....+.. +.+
T Consensus 213 ~~-~~~~~i~~~s~sK~~~~~G~r~G~~~-----~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~~l~~~~~~ 276 (365)
T 3get_A 213 IK-EFDNVLYLGTFSKLYGLGGLRIGYGI-----ANANIISAFYKL----RAPFN------VSNLALKAAVAAMDDDEFT 276 (365)
T ss_dssp HH-HCTTEEEEEESSSTTSCTTTCCEEEE-----ECHHHHHHHHHH----SCTTC------SCHHHHHHHHHHHTCHHHH
T ss_pred hc-cCCCEEEEeecchHhcCcchheEEEE-----cCHHHHHHHHHh----cCCCC------cCHHHHHHHHHHhCCHHHH
Confidence 11 1134677889999987322 1111 011111000000 00011 122222222222211 112
Q ss_pred HHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecC
Q psy11047 546 QKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAA 625 (943)
Q Consensus 546 ~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~ 625 (943)
.+..++ ..++++++.+.|.+. ++++. +
T Consensus 277 ~~~~~~---------------------------------------------------~~~~~~~l~~~l~~~-g~~~~-~ 303 (365)
T 3get_A 277 EKTLEN---------------------------------------------------NFSQMELYKEFAKKH-NIKII-D 303 (365)
T ss_dssp HHHHHH---------------------------------------------------HHHHHHHHHHHHHHT-TCEEC-C
T ss_pred HHHHHH---------------------------------------------------HHHHHHHHHHHHHhC-CCEEC-C
Confidence 222222 234566777777776 77764 4
Q ss_pred CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHH
Q psy11047 626 RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTA 692 (943)
Q Consensus 626 ~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~ 692 (943)
+..+.+.+++.+. ....+.+.|.++|. ++.+...-+..++|++++ +++|++++++.|+++.
T Consensus 304 ~~~~~~~~~~~~~--~~~~~~~~l~~~gi-~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 304 SYTNFITYFFDEK--NSTDLSEKLLKKGI-IIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CSSSEEEEECSSS--CHHHHHHHHHTTTE-ECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCC--CHHHHHHHHHHCCE-EEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 5667788888653 35788888888875 454432212679999765 7999999999998753
No 122
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.43 E-value=1.2e-11 Score=132.77 Aligned_cols=285 Identities=9% Similarity=-0.036 Sum_probs=175.3
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.+.+ ..++|+|||+|+..++.+. -.|+++.-+|.++
T Consensus 65 ~l~~~la~~~~~~~~----------~i~~~~g~t~al~~~~~~~-----------------------d~vi~~~~~~~~~ 111 (361)
T 3ftb_A 65 RLNKSIENYLKLKDI----------GIVLGNGASEIIELSISLF-----------------------EKILIIVPSYAEY 111 (361)
T ss_dssp HHHHHHHHHHTCCSC----------EEEEESSHHHHHHHHHTTC-----------------------SEEEEEESCCTHH
T ss_pred HHHHHHHHHhCCCcc----------eEEEcCCHHHHHHHHHHHc-----------------------CcEEEecCChHHH
Confidence 456677888887543 6899999999998776532 1366677889998
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhcccccccccccc
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~ 391 (943)
..++...+.+++.++.+.++.+++++|++++++ +.+|+.+...+.+|.+-| +.+|++
T Consensus 112 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~------------- 171 (361)
T 3ftb_A 112 EINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLK------------- 171 (361)
T ss_dssp HHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHH-------------
T ss_pred HHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHH-------------
Confidence 888865455889999998889999999988864 346667777888998876 555566
Q ss_pred ccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhc
Q psy11047 392 LQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQ 471 (943)
Q Consensus 392 L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~ 471 (943)
+|++||+ ++++|.+|+.+ .+. . .... .. ..
T Consensus 172 -------~~~~~~~-------~li~De~~~~~-~~~-~--------------------------------~~~~-~~-~~ 201 (361)
T 3ftb_A 172 -------LAEEKKK-------TIIIDEAFIEF-TGD-P--------------------------------SSSF-VG-EI 201 (361)
T ss_dssp -------HHHHHTC-------EEEEECSSGGG-TCC-T--------------------------------TSSS-GG-GT
T ss_pred -------HhhhcCC-------EEEEECcchhh-cCC-c--------------------------------ccch-hH-hc
Confidence 8889999 99999999866 321 0 0000 00 11
Q ss_pred CCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-HHHHH
Q psy11047 472 GLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-KGLQK 547 (943)
Q Consensus 472 Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-~Gl~~ 547 (943)
+....+-+..++||.++... ...+ ..++..+..-.... ..| ....+..+.....+-. +.+.+
T Consensus 202 ~~~~~~i~~~s~sK~~~~~G~r~g~~~----~~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~l~~~~~~~~ 267 (361)
T 3ftb_A 202 KNYSCLFIIRAMTKFFAMPGIRFGYGI----TNNKEIAAKIKAKQ----NPW------NINCFAEMAAINCLKDTNYIEE 267 (361)
T ss_dssp TTCSSEEEEEESSSTTSCGGGCCEEEE----ESCHHHHHHHHTTS----CTT------CSCHHHHHHHHHTSSCHHHHHH
T ss_pred ccCCCEEEEeeChhhcCCCCcceeEEE----eCCHHHHHHHHhhC----CCC------CCCHHHHHHHHHHhcCHHHHHH
Confidence 11223455678999987221 1111 00111110000000 001 1112222222222211 11222
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
..++ ..++++++.+.|++.|+++...++.
T Consensus 268 ~~~~---------------------------------------------------~~~~~~~l~~~l~~~~~~~~~~~~~ 296 (361)
T 3ftb_A 268 SLLW---------------------------------------------------IKKERKRFIEELNKIGFIKRVFSPH 296 (361)
T ss_dssp HHHH---------------------------------------------------HHHHHHHHHHHHHHSSSEEEEECCS
T ss_pred HHHH---------------------------------------------------HHHHHHHHHHHHHhCCCCceecCCC
Confidence 1111 2456777888888889988333566
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeecc-c--CCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-L--RIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-~--~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
.+.+.|++.+.+ ..++.++|.++|. ++.+.. . .+..++|++++ +.++++++++.|+++.+
T Consensus 297 ~~~~~~~~~~~~--~~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 297 ANFVLCRLENIS--GEKLYDSLLKEDI-VIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp SSEEEEEESSSC--HHHHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCC--HHHHHHHHHHCCe-EEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 778888887532 5688888888875 554422 2 23679999765 78899999999988754
No 123
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.43 E-value=3.3e-11 Score=136.09 Aligned_cols=337 Identities=15% Similarity=0.061 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHhccC---ccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINCLG---FTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTE 281 (943)
Q Consensus 205 ~silgd~L~~alN~n~---~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~ 281 (943)
+..+.+.+...+.... ..|...+...+++..+.+|+.+..|.+ .. ...++|+|||+|+..++.+..
T Consensus 93 ~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~--------~~v~~t~G~~~al~~~~~~l~-- 161 (448)
T 3aow_A 93 KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD--------NDIMITSGSQQALDLIGRVFL-- 161 (448)
T ss_dssp HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT--------SEEEEESSHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch--------hhEEEeCcHHHHHHHHHHHHc--
Confidence 3444455555443321 234444456788888888887777985 21 368999999999987776531
Q ss_pred HHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEE-EE
Q psy11047 282 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFI-FS 360 (943)
Q Consensus 282 ~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~V-Va 360 (943)
.+| -.|++.+-+|.+...++...+.+++.||.+++| +|+++|+++|+.+..++..+.+| +.
T Consensus 162 --------~~G---------d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~ 223 (448)
T 3aow_A 162 --------NPG---------DIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTV 223 (448)
T ss_dssp --------CTT---------CEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred --------CCC---------CEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEEC
Confidence 122 246677788999888876444588889987766 99999999997321122235665 45
Q ss_pred ecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCcccccccccccee
Q psy11047 361 GLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 437 (943)
Q Consensus 361 TaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~V 437 (943)
....+.+|.+-| +++|.+ +|++||+ ++++|.+|+.+ .+.
T Consensus 224 ~~~~NPtG~~~~~~~l~~i~~--------------------la~~~~~-------~lI~De~y~~~-~~~---------- 265 (448)
T 3aow_A 224 PTFQNPAGVTMNEDRRKYLLE--------------------LASEYDF-------IVVEDDPYGEL-RYS---------- 265 (448)
T ss_dssp CSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEECSCTTC-BCS----------
T ss_pred CCCCCCcCCCCCHHHHHHHHH--------------------HHHHcCC-------EEEEECCCccc-cCC----------
Confidence 667788898866 567777 9999999 99999999876 330
Q ss_pred eeeecchhhhHHHHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCccc
Q psy11047 438 VIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLAI 515 (943)
Q Consensus 438 cFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~~ 515 (943)
|. ..+.... +. ....+-...+++|+++ +|-+..+ ..+..+..-.. ..
T Consensus 266 ---------------------g~-~~~~~~~-~~-~~~~vi~~~S~SK~~~~GlriG~v~-----~~~~l~~~l~~--~~ 314 (448)
T 3aow_A 266 ---------------------GN-PEKKIKA-LD-NEGRVIYLGTFSKILAPGFRIGWMV-----GDPGIIRKMEI--AK 314 (448)
T ss_dssp ---------------------SC-CCCCTGG-GC-TTSCEEEEEESTTTTCGGGCCEEEE-----ECHHHHHHHHH--HH
T ss_pred ---------------------CC-CCcCHHh-cC-CCCCEEEEccchhhccccccEEEEE-----eCHHHHHHHHH--HH
Confidence 00 0011111 11 1123556677889987 1111111 00111100000 00
Q ss_pred ccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCccccc
Q psy11047 516 DYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFIL 595 (943)
Q Consensus 516 d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~ 595 (943)
.. ++... ..+..++....+...++.++++++.+ .
T Consensus 315 ~~--~~~~~----~~~~q~a~~~~L~~~~~~~~~~~~~~-----------------------~----------------- 348 (448)
T 3aow_A 315 QS--TDLCT----NVFGQVVAWRYVDGGYLEKHIPEIRK-----------------------F----------------- 348 (448)
T ss_dssp HH--HHSSC----CHHHHHHHHHHHHTTHHHHHHHHHHH-----------------------H-----------------
T ss_pred HH--hcCCC----CHHHHHHHHHHHHhCCHHHHHHHHHH-----------------------H-----------------
Confidence 00 01101 12233333333322234444444211 0
Q ss_pred ccCCcHHHHHHHHHHHHHHhC-CC-CeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeec-cc----CCCcEE
Q psy11047 596 SYFPKFQSVRLAQKFEALVLG-DP-RFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPA-SL----RIQGLG 668 (943)
Q Consensus 596 ~~~p~~~~~~LA~~l~~~L~~-~p-~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t-~~----~g~~~l 668 (943)
..+.++++.+.|++ .| ++++..+...+.+.+++... ....++.++|.++|. .+.+. .. .+..++
T Consensus 349 -------~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~-~~~~~l~~~l~~~gV-~v~pg~~f~~~~~~~~~i 419 (448)
T 3aow_A 349 -------YKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDG-IDSKKMLERAIKKGV-AYVPGEAFYAHRDVKNTM 419 (448)
T ss_dssp -------HHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTT-CCHHHHHHHHHHTTE-ECEEGGGGSTTCCCCSEE
T ss_pred -------HHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCC-CCHHHHHHHHHHCCc-EEEcchhhcCCCCCCCEE
Confidence 12345666666665 57 58876655566677777531 124678888888875 44432 22 246799
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 669 RAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 669 R~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
|++++. .++++|+++++.|.++.++.
T Consensus 420 Rls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 420 RLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp EEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred EEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 997665 38899999999998876554
No 124
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.41 E-value=1.8e-11 Score=132.28 Aligned_cols=132 Identities=8% Similarity=-0.055 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.+++..+.+++.+.+|.+.. ....++|+|||+|+..++.+.. .+| -.|+++.-
T Consensus 61 ~~lr~~la~~~~~~~~~~~~--------~~~i~~t~g~~~a~~~~~~~~~----------~~g---------d~vl~~~~ 113 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQAR--------PEWIFPIPDVVRGLYIAIDHFT----------PAQ---------SKVIVPTP 113 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCC--------GGGEEEESCHHHHHHHHHHHHS----------CTT---------CCEEEEES
T ss_pred HHHHHHHHHHHHHHhCCCCC--------HHHEEEeCChHHHHHHHHHHhc----------CCC---------CEEEEcCC
Confidence 67888888899888886532 1368999999999988776531 122 13566778
Q ss_pred CchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccccc
Q psy11047 310 AHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLG 386 (943)
Q Consensus 310 aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~ 386 (943)
+|.++..++...+.+++.+|.+.+ +|+++|+++|+++ +.+++.+...+.+|.+-| +.+|.+
T Consensus 114 ~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~-------- 177 (377)
T 3fdb_A 114 AYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQAG------ARSILLCNPYNPLGMVFAPEWLNELCD-------- 177 (377)
T ss_dssp CCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCCHHHHHHHHH--------
T ss_pred CcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHHHHH--------
Confidence 899988887543348889998766 9999999999864 456777777888998865 555666
Q ss_pred cccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 387 FYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 387 ~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 178 ------------~~~~~~~-------~li~De~~~~~ 195 (377)
T 3fdb_A 178 ------------LAHRYDA-------RVLVDEIHAPL 195 (377)
T ss_dssp ------------HHHHTTC-------EEEEECTTGGG
T ss_pred ------------HHHHcCC-------EEEEEcccchh
Confidence 8999999 99999999875
No 125
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.40 E-value=1.9e-11 Score=133.86 Aligned_cols=306 Identities=11% Similarity=0.049 Sum_probs=172.9
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 224 ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 224 ~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
...+...++|..+.+++++++|.+.. -+++++||+||..++.+.. .+| -.
T Consensus 64 ~~~~~~~~~~~~~~~~la~~~g~~~~-----------~i~~~sGt~a~~~~~~~~~----------~~g---------d~ 113 (417)
T 3n0l_A 64 GGCEFVDEIETLAIERCKKLFNCKFA-----------NVQPNSGSQANQGVYAALI----------NPG---------DK 113 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHS----------CTT---------CE
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCc-----------ceEeccHHHHHHHHHHHhc----------CCC---------CE
Confidence 34467789999999999999998643 2455566999988876531 122 24
Q ss_pred EEecCCCchHHHHHH----HHCC-ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhh
Q psy11047 304 AYCSDQAHSSVEKAG----LIGL-VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGT 378 (943)
Q Consensus 304 V~~S~~aHySv~KAa----~LG~-~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~ 378 (943)
|+++..+|.+..... ..|. ..++.+++++++.+|+++|+++|+... +.+|+.+.++ .|.+.|+++|.+
T Consensus 114 vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~ 186 (417)
T 3n0l_A 114 ILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFRE 186 (417)
T ss_dssp EEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHH
T ss_pred EEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHH
Confidence 667788887765422 2332 246677788889999999999998531 4566655544 499999999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhcc
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSK 458 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~ 458 (943)
+|++||+ |+++|++++....+
T Consensus 187 --------------------l~~~~~~-------~li~Dea~~~g~~~-------------------------------- 207 (417)
T 3n0l_A 187 --------------------IADEIGA-------YLFADIAHIAGLVV-------------------------------- 207 (417)
T ss_dssp --------------------HHHHHTC-------EEEEECTTTHHHHH--------------------------------
T ss_pred --------------------HHHHcCC-------EEEEECccchhhhh--------------------------------
Confidence 9999999 99999996432011
Q ss_pred CcccccchhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCc-chHHHHHH
Q psy11047 459 GRLHCVPASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF-RALKLWFV 536 (943)
Q Consensus 459 G~~~~p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf-rALklW~t 536 (943)
..... ..+..+|.++.++||++. .+- +.+. ..++..+..-. .....+..++-.. ....++..
T Consensus 208 ----~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~aa~~~a 271 (417)
T 3n0l_A 208 ----AGEHP---SPFPYAHVVSSTTHKTLRGPRG-GIIM---TNDEELAKKIN-----SAIFPGIQGGPLMHVIAAKAVG 271 (417)
T ss_dssp ----TTSSC---CCTTTCSEEEEESSTTTCSCSC-EEEE---ESCHHHHHHHH-----HHHTTTTCSSCCHHHHHHHHHH
T ss_pred ----cccCC---CccccceEEEeeCccccCCCCe-eEEE---ECCHHHHHHHh-----hhhCCcccCCcHHHHHHHHHHH
Confidence 00000 012257999999999875 221 1110 00000100000 0000001111111 11122223
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhC
Q psy11047 537 IRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 616 (943)
Q Consensus 537 Lr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~ 616 (943)
+......++.++.++ ..++++++.+.|.+
T Consensus 272 ~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 272 FKFNLSDEWKVYAKQ---------------------------------------------------VRTNAQVLANVLMD 300 (417)
T ss_dssp HHHHTSHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHH---------------------------------------------------HHHHHHHHHHHHHh
Confidence 332222334333333 24456777777776
Q ss_pred CCCeEEecC-CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccC-------CCcEEEEee----cCCCCHHHHHHH
Q psy11047 617 DPRFEIPAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLR-------IQGLGRAQN----FTRTTNDDITRD 684 (943)
Q Consensus 617 ~p~~eIl~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~-------g~~~lR~v~----~~~tt~edId~l 684 (943)
.++++... ...+++.+.+.+...-...+.+.|.+.|. .+.+.... ....+|+.. ....++++|+++
T Consensus 301 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~ 378 (417)
T 3n0l_A 301 -RKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGI-TANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIV 378 (417)
T ss_dssp -TTCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTE-ECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred -CCceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCe-EEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHH
Confidence 67887652 34566767665432124567777777775 44322111 234689843 334679999999
Q ss_pred HHHHHHHHHH
Q psy11047 685 WNEIRNTATE 694 (943)
Q Consensus 685 l~~I~~~~~~ 694 (943)
++.|.++..+
T Consensus 379 ~~~l~~~l~~ 388 (417)
T 3n0l_A 379 SNYIADILDD 388 (417)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999887654
No 126
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.40 E-value=8.4e-12 Score=134.25 Aligned_cols=299 Identities=7% Similarity=-0.050 Sum_probs=171.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
+...|...++ .+++++++|.+. .++++|||+|+..++.+.... | .+.
T Consensus 44 ~~~~~~~~~l----~~~la~~~~~~~------------~i~~~~g~~a~~~a~~~~~~~----------g-------~~~ 90 (359)
T 3pj0_A 44 YGNGAVIEDF----ETKIAKILGKQS------------AVFFPSGTMAQQIALRIWADR----------K-------ENR 90 (359)
T ss_dssp TTBSHHHHHH----HHHHHHHHTCSE------------EEEESCHHHHHHHHHHHHHHH----------H-------TCC
T ss_pred ccCCHHHHHH----HHHHHHHhCCCc------------EEEeCCHHHHHHHHHHHHHhc----------C-------CCc
Confidence 3344555544 457788888753 478899999999888775431 1 233
Q ss_pred EEEecCCCchHHHHHH---HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcc-cccccHHHh--
Q psy11047 303 VAYCSDQAHSSVEKAG---LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAF-LVVDSYCCL-- 376 (943)
Q Consensus 303 vV~~S~~aHySv~KAa---~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~t-GaIDpL~eI-- 376 (943)
+|+++...|++..... .+.+..++.++. +++.+|+++|+++ .. .+.+|+.+...+.+ |.+.|.+++
T Consensus 91 vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~ 162 (359)
T 3pj0_A 91 RVAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEK 162 (359)
T ss_dssp EEEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred EEEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHH
Confidence 5777888888875432 333457778887 5789999999887 21 24556555444444 677665555
Q ss_pred -hhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHh
Q psy11047 377 -GTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRL 455 (943)
Q Consensus 377 -a~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l 455 (943)
.+ +|++||+ |+|+|+|+..+ .. ..
T Consensus 163 l~~--------------------~~~~~~~-------~li~D~a~~~~-~~--~~------------------------- 187 (359)
T 3pj0_A 163 ISE--------------------YCHEQGI-------SLHLDGARLWE-IT--PF------------------------- 187 (359)
T ss_dssp HHH--------------------HHHHHTC-------EEEEEETTCGG-GH--HH-------------------------
T ss_pred HHH--------------------HHHHcCC-------EEEEECcchhc-ch--hh-------------------------
Confidence 77 9999999 99999987543 11 00
Q ss_pred hccCcccccchhhhhcCCCCeeEEEEcCCCccCccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHH
Q psy11047 456 NSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWF 535 (943)
Q Consensus 456 ~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~ 535 (943)
.-....... ..+|.+++++||+++..-...+. .++..+..-.. .... ++ ........+
T Consensus 188 ------~~~~~~~~~---~~~d~~~~s~sK~~~~~~gg~~~----~~~~l~~~~~~--~~~~--~~-~~~~~~~~~---- 245 (359)
T 3pj0_A 188 ------YQKSAEEIC---ALFDSVYVSFYKGIGGIAGAILA----GNDDFVQEAKI--WKRR--YG-GDLISLYPY---- 245 (359)
T ss_dssp ------HTCCHHHHH---TTCSEEEEESSSTTCCSSCEEEE----ECHHHHHHHHH--HHHH--TT-CCCSCCHHH----
T ss_pred ------hCCCHHHhh---ccCCEEEEeccccCCCcceEEEE----CCHHHHHHHHH--HHHH--hC-CCcchhHHH----
Confidence 000111111 35799999999987632111110 01111100000 0000 00 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHh
Q psy11047 536 VIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 615 (943)
Q Consensus 536 tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~ 615 (943)
...+...+...++++ ++ ..+.++++.+.|+
T Consensus 246 --~~a~~~~l~~~~~~~-----------------------~~-------------------------~~~~~~~l~~~L~ 275 (359)
T 3pj0_A 246 --ILSADYYFEKRIGKM-----------------------AE-------------------------YFEAAKGLAERFN 275 (359)
T ss_dssp --HHHHHHHHHHHGGGH-----------------------HH-------------------------HHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHh-----------------------HH-------------------------HHHHHHHHHHHHh
Confidence 111111222222110 00 2456778888999
Q ss_pred CCCCeEEe-cCCCccEEEEEecCCC-hHHHHHHHHHhccCcEEEeecc---cCCCcEEEEeecC---CCCHHHHHHHHHH
Q psy11047 616 GDPRFEIP-AARHLGMVVIRLLGEN-ILTEKLLKRLNSKGRLHCVPAS---LRIQGLGRAQNFT---RTTNDDITRDWNE 687 (943)
Q Consensus 616 ~~p~~eIl-~~~~l~iV~Fr~~g~n-~l~~~Ll~~L~~~G~~~~s~t~---~~g~~~lR~v~~~---~tt~edId~ll~~ 687 (943)
++|++++. .++..+.+.+++.... .....+.+.|.++|.+ +.+.. ..+..++|+.+.. ..+.+++++.++.
T Consensus 276 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~-v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~ 354 (359)
T 3pj0_A 276 SCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVG-ISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRC 354 (359)
T ss_dssp TSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEE-CCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHH
T ss_pred hCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcE-ecCCccccCCCceEEEEEecCccccCCHHHHHHHHHH
Confidence 99999995 5778899998886432 2256788888888854 43321 2456789995432 3567777777776
Q ss_pred HHH
Q psy11047 688 IRN 690 (943)
Q Consensus 688 I~~ 690 (943)
|.+
T Consensus 355 l~~ 357 (359)
T 3pj0_A 355 LEK 357 (359)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 127
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.39 E-value=3e-11 Score=132.11 Aligned_cols=129 Identities=7% Similarity=-0.087 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
.....+.+++++++|.+.+ ..++|+|||+|+..++.+++.. . + ++-+++.+..-
T Consensus 87 ~~~~~l~~~la~~~~~~~~----------~v~~~~gg~~a~~~al~~~~~~--~------~--------~~~vi~~~~~y 140 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELN----------RVFPVNSGTEANEAALKFARAH--T------G--------RKKFVAAMRGF 140 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEE----------EEEEESSHHHHHHHHHHHHHHH--H------S--------CCEEEEETTCC
T ss_pred HHHHHHHHHHHHhcCCCcC----------EEEEcCcHHHHHHHHHHHHHHH--h------C--------CCeEEEEcCCc
Confidence 3445677788888876543 6899999999999998876531 1 1 22345555555
Q ss_pred chHHHHHHHH-CCc-----------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HH
Q psy11047 311 HSSVEKAGLI-GLV-----------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YC 374 (943)
Q Consensus 311 HySv~KAa~L-G~~-----------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~ 374 (943)
|.+...++.+ |.. .+..++. .|+++|+++|+.+ +.+|+++...+.+|.+.| ++
T Consensus 141 ~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~ 209 (395)
T 1vef_A 141 SGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLR 209 (395)
T ss_dssp CCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHH
T ss_pred CCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHH
Confidence 6555555543 331 1344443 4899999988642 567777666667898766 99
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|++||+ ++++|++|+++
T Consensus 210 ~i~~--------------------l~~~~~~-------~li~Dea~~~~ 231 (395)
T 1vef_A 210 AARE--------------------ITQEKGA-------LLILDEIQTGM 231 (395)
T ss_dssp HHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHH--------------------HHHHcCC-------EEEEEecccCC
Confidence 9999 9999999 99999999864
No 128
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.39 E-value=3.9e-11 Score=132.85 Aligned_cols=133 Identities=11% Similarity=-0.013 Sum_probs=98.2
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
.+|...++|..+ +|+++|.+ ...++|+|||+|+..++.+.. + .+| -.|
T Consensus 34 ~~~~~~~l~~~~---~a~~~g~~-----------~~~v~~~sgt~al~~al~~l~---~------~~G---------d~V 81 (377)
T 3ju7_A 34 YGPINQRFEQTI---MSGFFQNR-----------GAVTTVANATLGLMAAIQLKK---R------KKG---------KYA 81 (377)
T ss_dssp SCHHHHHHHHHH---HHHTSTTC-----------SEEEEESCHHHHHHHHHHHHS---C------TTC---------CEE
T ss_pred CCHHHHHHHHHH---HHHHhCCC-----------CeEEEeCCHHHHHHHHHHHcC---C------CCc---------CEE
Confidence 367777777653 17777722 247999999999988876531 0 122 247
Q ss_pred EecCCCchHHHHHHHHCCccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 305 YCSDQAHSSVEKAGLIGLVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 305 ~~S~~aHySv~KAa~LG~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
+++..+|.+...++..-+..++.++++ +++.+|+++|+++|..... .+.+|+ .++.+|.+.|+++|.+
T Consensus 82 i~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~---~tk~v~---~~~~~G~~~~~~~i~~----- 150 (377)
T 3ju7_A 82 LMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKE---EVAIVV---PYATFGSWMNLEEYEE----- 150 (377)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGG---GEEEEC---CBCGGGBCCCCHHHHH-----
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCC---CceEEE---EECCCCCccCHHHHHH-----
Confidence 789999999988886444588889987 5789999999999843210 134444 3456799999999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+ ||+ ++|+|+|++..
T Consensus 151 ---------------la~-~~~-------~vi~D~a~a~g 167 (377)
T 3ju7_A 151 ---------------LEK-KGV-------PVVVDAAPGFG 167 (377)
T ss_dssp ---------------HHH-TTC-------CBEEECTTCTT
T ss_pred ---------------HHh-cCC-------EEEEECCCccC
Confidence 999 999 99999998644
No 129
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.39 E-value=1.6e-11 Score=133.08 Aligned_cols=304 Identities=8% Similarity=-0.061 Sum_probs=178.1
Q ss_pred CccccCChhHHHHHHHHHHHHHHHh-CCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhc
Q psy11047 220 GFTWASSPACTELEIITMNWLGKMI-GLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI 298 (943)
Q Consensus 220 ~~~~~~SPaateLE~~Vi~wLa~Ll-G~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i 298 (943)
...|...+...+++..+ ++++ +.+.+ ..++|+|||+|+..++.+.. .+|
T Consensus 56 ~~~y~~~~g~~~l~~~l----a~~~~~~~~~----------~v~~~~g~~~a~~~~~~~l~----------~~g------ 105 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSV----SQLYTGVKPE----------QILQTNGATGANLLVLYSLI----------EPG------ 105 (375)
T ss_dssp CCSSCCTTCCHHHHHHH----HTTSSSCCGG----------GEEEESHHHHHHHHHHHHHC----------CTT------
T ss_pred CcCCCCCCChHHHHHHH----HHHhccCChh----------hEEEcCChHHHHHHHHHHhc----------CCC------
Confidence 33444444455666554 4544 34433 68999999999988876531 122
Q ss_pred CCceEEEecCCCchHHHHHHHHCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---H
Q psy11047 299 NSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---Y 373 (943)
Q Consensus 299 ~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L 373 (943)
-.|++...+|.+...++..-+.+++.++.+ +.+.+|+++|+++++.+ +.+|+.+...+.+|.+-| +
T Consensus 106 ---d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l 176 (375)
T 3op7_A 106 ---DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYL 176 (375)
T ss_dssp ---CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHH
T ss_pred ---CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHH
Confidence 246778889998888775434477788775 35568999999998743 556777778889999988 8
Q ss_pred HHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHH
Q psy11047 374 CCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLK 453 (943)
Q Consensus 374 ~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~ 453 (943)
++|.+ +|++||+ |+++|.+|+++ .+. +
T Consensus 177 ~~i~~--------------------la~~~~~-------~li~De~~~~~-~~~-~------------------------ 203 (375)
T 3op7_A 177 EELVE--------------------IASEVGA-------YILSDEVYRSF-SEL-D------------------------ 203 (375)
T ss_dssp HHHHH--------------------HHHTTTC-------EEEEECCSCCC-SSS-C------------------------
T ss_pred HHHHH--------------------HHHHcCC-------EEEEEcccccc-ccc-C------------------------
Confidence 88888 9999999 99999999876 321 0
Q ss_pred HhhccCcccccchhhhhcCCCCeeEEEEcCCCccCcc---CcchhhhhcccCccccccCCCCcccccCc-cccCCCCCcc
Q psy11047 454 RLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVK---NSGALHRTFNVEPLYLRHENSGLAIDYMH-WQIPLSKRFR 529 (943)
Q Consensus 454 ~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr---~~~~L~~af~~~p~YL~~~~~g~~~d~~~-~tie~SRrfr 529 (943)
.+..... ...+-+..+++|.++.. -...+ .++..+..-. .... ++... .
T Consensus 204 ---------~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~v~-----~~~~l~~~~~-----~~~~~~~~~~----~ 256 (375)
T 3op7_A 204 ---------VPSIIEV----YDKGIAVNSLSKTYSLPGIRIGWVA-----ANHQVTDILR-----DYRDYTMICA----G 256 (375)
T ss_dssp ---------CCCHHHH----CTTEEEEEESSSSSSCGGGCCEEEE-----CCHHHHHHHT-----TTGGGTTSCC----C
T ss_pred ---------CCchhhh----cCCEEEEeEChhhcCCcccceEEEE-----eCHHHHHHHH-----HHHhhhccCC----C
Confidence 0111111 12346677889998722 11111 0111110000 0000 11111 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHH
Q psy11047 530 ALKLWFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQK 609 (943)
Q Consensus 530 ALklW~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~ 609 (943)
.+..++....+. .+.+.+++..+ . ..+.++.
T Consensus 257 ~~~~~~~~~~l~--~~~~~~~~~~~-----------------------~------------------------~~~~~~~ 287 (375)
T 3op7_A 257 VFDDLVAQLALA--HYQEILERNRH-----------------------I------------------------LEENLAI 287 (375)
T ss_dssp HHHHHHHHHHHH--THHHHHHHHHH-----------------------H------------------------HHHHHHH
T ss_pred cHHHHHHHHHHh--ccHHHHHHHHH-----------------------H------------------------HHHHHHH
Confidence 222333333222 12233333110 0 2345677
Q ss_pred HHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHH-hccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHH
Q psy11047 610 FEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRL-NSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEI 688 (943)
Q Consensus 610 l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L-~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I 688 (943)
+.+.|++.|++++..+.....+.+.+... .....+.+++ .++|.+...........++|++++. +.++|+++++.|
T Consensus 288 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~i~~~l~~l 364 (375)
T 3op7_A 288 LDQWIEEEPLVSYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC--EQETLIKGLEKL 364 (375)
T ss_dssp HHHHHHHCTTEEECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS--CHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 78888888899887655544455555421 1246777776 5667543322233346799996543 348899999888
Q ss_pred HHHHHH
Q psy11047 689 RNTATE 694 (943)
Q Consensus 689 ~~~~~~ 694 (943)
.++.++
T Consensus 365 ~~~l~~ 370 (375)
T 3op7_A 365 SQFLRR 370 (375)
T ss_dssp HHHHGG
T ss_pred HHHHHH
Confidence 877554
No 130
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.37 E-value=1.2e-11 Score=138.42 Aligned_cols=171 Identities=9% Similarity=0.023 Sum_probs=100.3
Q ss_pred ceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH
Q psy11047 193 YMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL 272 (943)
Q Consensus 193 rf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL 272 (943)
.|+.|..+.+. +.+. +.+...+......|..++...+++ +++++++|.+ .++||+|||+||.
T Consensus 42 ~ylD~~~~~~~-~~v~-~a~~~~l~~~~~~y~~~~~~~~l~----~~la~~~~~~------------~v~~t~~gt~A~~ 103 (467)
T 2oqx_A 42 VFIDLLTDSGT-GAVT-QSMQAAMMRGDEAYSGSRSYYALA----ESVKNIFGYQ------------YTIPTHQGRGAEQ 103 (467)
T ss_dssp CSEECSCCSSC-SCCC-HHHHHHTTSCCCCSSSCHHHHHHH----HHHHHHHCCS------------EEEEEC--CCSHH
T ss_pred eeEecccCCCc-HHHH-HHHHHHhccCcceeccCchhHHHH----HHHHHHhCcC------------cEEEcCCcHHHHH
Confidence 45665444333 3333 223333433223455566666555 4667778763 4799999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCchhhhcCC-ceEEEecCCCchHHHHHH-HHCCccEEEE------ecC----CCCCcCHHH
Q psy11047 273 ICLLAGRTEAIRKYQQSHPELEHAEINS-RLVAYCSDQAHSSVEKAG-LIGLVNMRYI------ESD----DKLSLRGDK 340 (943)
Q Consensus 273 ~AL~aAR~~~l~~~~~~~pGl~~~~i~~-~~vV~~S~~aHySv~KAa-~LG~~~v~~V------p~D----~~grmD~da 340 (943)
.|+.+++...... .|. .. +- |+++ ..|+....+. ..+...+... +.+ .++.+|+++
T Consensus 104 ~al~~~~~~~~~~-----~G~-----~~~d~-Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (467)
T 2oqx_A 104 IYIPVLIKKREQE-----KGL-----DRSKM-VAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEG 171 (467)
T ss_dssp HHHHHHHHHHHHH-----HCC-----CTTTC-EEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHH
T ss_pred HHHHHHhcccccc-----CCC-----Cccce-EEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHH
Confidence 9999887431110 010 01 22 4445 5897655544 3333333222 223 467899999
Q ss_pred HHHHHHHhhccCCCcEEEEEecCCCcc-ccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhH
Q psy11047 341 LIEAIERDKKKHLIPFFIFSGLALPAF-LVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKF 416 (943)
Q Consensus 341 Le~aI~~d~~kG~~P~~VVaTaGTT~t-GaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHV 416 (943)
|+++|+... ...+.+|+.+..++.+ |.+ +++++|++ +|++||+ |+|+
T Consensus 172 Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~--------------------la~~~gi-------~li~ 222 (467)
T 2oqx_A 172 LERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYS--------------------IAKKYDI-------PVVM 222 (467)
T ss_dssp HHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHH--------------------HHHHTTC-------CEEE
T ss_pred HHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHH--------------------HHHHcCC-------EEEE
Confidence 999998631 0125566665555555 554 56889998 9999999 9999
Q ss_pred HhhhcC
Q psy11047 417 EALVLG 422 (943)
Q Consensus 417 DAA~GG 422 (943)
|+|++.
T Consensus 223 D~a~~~ 228 (467)
T 2oqx_A 223 DSARFA 228 (467)
T ss_dssp ECTTHH
T ss_pred Echhhh
Confidence 976543
No 131
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.36 E-value=6e-11 Score=128.87 Aligned_cols=138 Identities=11% Similarity=-0.039 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe
Q psy11047 227 PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC 306 (943)
Q Consensus 227 PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~ 306 (943)
+...+++..+.+|+.+.+|.+... ....++|+|||+|+..++.+.. .+| -.|++
T Consensus 63 ~~~~~l~~~ia~~~~~~~g~~~~~-------~~~v~~~~g~~~a~~~~~~~l~----------~~g---------d~vl~ 116 (376)
T 2dou_A 63 SCTLPFLEEAARWYEGRYGVGLDP-------RREALALIGSQEGLAHLLLALT----------EPE---------DLLLL 116 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCT-------TTSEEEESSHHHHHHHHHHHHC----------CTT---------CEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCC-------CccEEEcCCcHHHHHHHHHHhc----------CCC---------CEEEE
Confidence 356788888888888888986210 0258999999999987776531 122 24667
Q ss_pred cCCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhcccc
Q psy11047 307 SDQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVK 383 (943)
Q Consensus 307 S~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~ 383 (943)
.+-+|.+...++...+.+++.+|.++.+.+|+++|+++|... +.+|+.+...+.+|.+-| +++|.+
T Consensus 117 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~----- 185 (376)
T 2dou_A 117 PEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVADWGYFEEALG----- 185 (376)
T ss_dssp ESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHH-----
T ss_pred CCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccCCHHHHHHHHH-----
Confidence 788899988887544457888888545579999999999643 567777777788898866 667777
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 186 ---------------~~~~~~~-------~li~De~~~~~ 203 (376)
T 2dou_A 186 ---------------LARKHGL-------WLIHDNPYVDQ 203 (376)
T ss_dssp ---------------HHHHTTC-------EEEEECTTGGG
T ss_pred ---------------HHHHcCC-------EEEEEccchhc
Confidence 9999999 99999999875
No 132
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.36 E-value=1.8e-10 Score=126.44 Aligned_cols=126 Identities=11% Similarity=0.091 Sum_probs=92.4
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...+++ +.+++++|.++ .+++++||+|+..++.+.. .+| -.|
T Consensus 50 ~~~~~~~l~----~~la~~~~~~~------------~i~~~sGt~a~~~~~~~~~----------~~g---------~~v 94 (386)
T 1cs1_A 50 GNPTRDVVQ----RALAELEGGAG------------AVLTNTGMSAIHLVTTVFL----------KPG---------DLL 94 (386)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE------------EEEESSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CCccHHHHH----HHHHHHhCCCc------------EEEeCCHHHHHHHHHHHHh----------CCC---------CEE
Confidence 344445554 56677777652 3555666999988877541 122 246
Q ss_pred EecCCCchHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 305 YCSDQAHSSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 305 ~~S~~aHySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
+++..+|.++..+. ...+..++.++.+ |+++|+++|+++ +.+|+.+...+.+|.+.|+++|.+
T Consensus 95 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~-- 161 (386)
T 1cs1_A 95 VAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-----DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICH-- 161 (386)
T ss_dssp EEETTCCHHHHHHHHHHHTTTSCEEEEECTT-----CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHH--
T ss_pred EEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-----CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHH--
Confidence 77888999866654 2223467777764 799999999753 567778888999999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 162 ------------------l~~~~~~-------~li~De~~~~~ 179 (386)
T 1cs1_A 162 ------------------LAREVGA-------VSVVDNTFLSP 179 (386)
T ss_dssp ------------------HHHHTTC-------EEEEECTTTCT
T ss_pred ------------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999876
No 133
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.35 E-value=1.5e-10 Score=128.97 Aligned_cols=119 Identities=5% Similarity=-0.120 Sum_probs=92.1
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHH
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVE 315 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~ 315 (943)
+.+++++++|.+ ..++++||++|+..++.+.. .+| -.|+++...|.+..
T Consensus 67 l~~~ia~~~g~~------------~~i~~~~g~~ai~~~~~~l~----------~~g---------d~Vl~~~~~y~~~~ 115 (404)
T 1e5e_A 67 LEGKIAFLEKTE------------ACVATSSGMGAIAATVLTIL----------KAG---------DHLISDECLYGCTH 115 (404)
T ss_dssp HHHHHHHHHTCS------------EEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEESCCCHHHH
T ss_pred HHHHHHHHhCCC------------cEEEeCChHHHHHHHHHHHh----------CCC---------CEEEEeCCCchhHH
Confidence 445667777875 36888999999987776421 122 24777889999887
Q ss_pred H----HHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccc
Q psy11047 316 K----AGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 316 K----Aa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~ 391 (943)
. ++...+.+++.++.+ |+++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 116 ~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~------------- 171 (404)
T 1e5e_A 116 ALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCK------------- 171 (404)
T ss_dssp HHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH-------------
T ss_pred HHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHH-------------
Confidence 7 444334578888875 788998888643 678888889999999999999999
Q ss_pred ccCchHHHHHH-cCCCCCccchhhhHHhhhcCC
Q psy11047 392 LQTNFPNFILS-YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 392 L~RrfR~iar~-~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|+ ++++|.+|+.+
T Consensus 172 -------la~~~~~~-------~li~De~~~~~ 190 (404)
T 1e5e_A 172 -------DAHSQEGV-------LVIADNTFCSP 190 (404)
T ss_dssp -------HHHTSTTC-------EEEEECTTTCT
T ss_pred -------HHHhhcCC-------EEEEECCCchh
Confidence 9999 999 99999999876
No 134
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.35 E-value=1.3e-10 Score=127.36 Aligned_cols=137 Identities=10% Similarity=-0.068 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEe
Q psy11047 227 PACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYC 306 (943)
Q Consensus 227 PaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~ 306 (943)
....++...+.+|+.+..|.+-. ....++|+|||+|+..++.+.. .+| -.|++
T Consensus 68 ~g~~~lr~~ia~~~~~~~g~~~~--------~~~i~~t~g~~~al~~~~~~l~----------~~g---------d~Vlv 120 (385)
T 1b5p_A 68 AGIPELREALAEKFRRENGLSVT--------PEETIVTVGGSQALFNLFQAIL----------DPG---------DEVIV 120 (385)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCCC--------GGGEEEESHHHHHHHHHHHHHC----------CTT---------CEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCC--------hHHEEEcCChHHHHHHHHHHhc----------CCC---------CEEEE
Confidence 34578888888899888886421 1268999999999987765421 122 23666
Q ss_pred cCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhcc
Q psy11047 307 SDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMI 381 (943)
Q Consensus 307 S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~ 381 (943)
+.-+|.++..++...+.+++.++.+. .+.+|+++|+++|+.. +.+|+.+...+.+|.+-| +++|++
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~l~~i~~--- 191 (385)
T 1b5p_A 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPKEVLEALAR--- 191 (385)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH---
T ss_pred cCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCHHHHHHHHH---
Confidence 77789888888754445888899874 5689999999888643 556777778888999855 888888
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+.+
T Consensus 192 -----------------~~~~~~~-------~li~De~~~~~ 209 (385)
T 1b5p_A 192 -----------------LAVEHDF-------YLVSDEIYEHL 209 (385)
T ss_dssp -----------------HHHHTTC-------EEEEECTTTTC
T ss_pred -----------------HHHHcCC-------EEEEEccchhc
Confidence 9999999 99999999865
No 135
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.34 E-value=4.7e-11 Score=130.88 Aligned_cols=300 Identities=12% Similarity=0.090 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
.++..+.+++++++|.+.. -++++|||+|+..++.+.. .+| -.|++++.+
T Consensus 78 ~~~~~a~~~~~~~~~~~~~-----------~v~~~~Gs~a~~~al~~~~----------~~g---------d~Vi~~~~~ 127 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHA-----------NVQPHSGAQANGAVMLALA----------KPG---------DTVLGMSLD 127 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHC----------CTT---------CEEEEECC-
T ss_pred HHHHHHHHHHHHHhCCCCc-----------eeecCchHHHHHHHHHHcc----------CCC---------CEEEEcccc
Confidence 5666667889999998642 3569999999988876531 122 246777888
Q ss_pred chHHH-HHHH--H-CC-ccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccc
Q psy11047 311 HSSVE-KAGL--I-GL-VNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKG 384 (943)
Q Consensus 311 HySv~-KAa~--L-G~-~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d 384 (943)
|.++. .++. + |. ...+.++.+ +.+.+|+++|+++|.... +.+|+.+. +..|...++++|.+
T Consensus 128 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~--~~~~~~~~l~~i~~------ 194 (425)
T 3ecd_A 128 AGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHK-----PSLIIAGF--SAYPRKLDFARFRA------ 194 (425)
T ss_dssp -----------------CEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEEEC--SCCCSCCCHHHHHH------
T ss_pred cccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcC-----CcEEEEcc--ccCCCcCCHHHHHH------
Confidence 88732 3332 2 22 244556655 458999999999997532 44555543 34488899999999
Q ss_pred cccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCccccc
Q psy11047 385 LGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCV 464 (943)
Q Consensus 385 ~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p 464 (943)
+|++||+ |+++|.++.....+ .+. ...
T Consensus 195 --------------l~~~~~~-------~li~De~~~~g~~~-------------------------------~~~-~~~ 221 (425)
T 3ecd_A 195 --------------IADSVGA-------KLMVDMAHIAGVIA-------------------------------AGR-HAN 221 (425)
T ss_dssp --------------HHHHHTC-------EEEEECGGGHHHHH-------------------------------TTS-SCC
T ss_pred --------------HHHHcCC-------EEEEECcChHhhhh-------------------------------ccc-ccC
Confidence 9999999 99999996433011 000 000
Q ss_pred chhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCccccccCCCCcccccCccccCCCCC-cchHHHHHHHHHHHH
Q psy11047 465 PASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIRNFGI 542 (943)
Q Consensus 465 ~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr~~G~ 542 (943)
.++.+|.++.++||++. .+- +.+. ...+.....-. .....+..++-. .....++..+.....
T Consensus 222 -------~~~~~di~~~s~sK~l~g~~~-g~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 285 (425)
T 3ecd_A 222 -------PVEHAHVVTSTTHKTLRGPRG-GFVL---TNDEEIAKKIN-----SAVFPGLQGGPLMHVIAGKAVAFGEALT 285 (425)
T ss_dssp -------GGGTCSEEEEESSGGGCCCSC-EEEE---ESCHHHHHHHH-----HHHC-----CCCHHHHHHHHHHHHHHTS
T ss_pred -------chhcCcEEEecCCcccCCCCc-EEEE---eCCHHHHHHHH-----hhhCccccCCccHHHHHHHHHHHHHHHH
Confidence 01236899999999984 221 1110 00000000000 000000011111 111222223322222
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEE
Q psy11047 543 KGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEI 622 (943)
Q Consensus 543 ~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eI 622 (943)
.++.+..++ ..++++++.+.|.+ .++++
T Consensus 286 ~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~-~g~~~ 313 (425)
T 3ecd_A 286 DDFKTYIDR---------------------------------------------------VLANAQALGDVLKA-GGVDL 313 (425)
T ss_dssp HHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHH-TTCEE
T ss_pred HhHHHHHHH---------------------------------------------------HHHHHHHHHHHHHh-CCCee
Confidence 333333333 23456667777766 47888
Q ss_pred ecC-CCccEEEEEecCCChHHHHHHHHHhccCcEEEeeccc-------CCCcEEEEe----ecCCCCHHHHHHHHHHHHH
Q psy11047 623 PAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL-------RIQGLGRAQ----NFTRTTNDDITRDWNEIRN 690 (943)
Q Consensus 623 l~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~-------~g~~~lR~v----~~~~tt~edId~ll~~I~~ 690 (943)
..+ ...+++.+.+.+.......+.+.|.++|.+ +.+... .....+|+. +....++++|+++++.|++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~-v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 314 VTGGTDNHLLLVDLRPKGLKGAQVEQALERAGIT-CNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp GGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEE-CEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCE-ecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 754 467778877754222246677778777854 432111 123479996 4555669999999999998
Q ss_pred HHHHH
Q psy11047 691 TATEI 695 (943)
Q Consensus 691 ~~~~l 695 (943)
+.++.
T Consensus 393 ~l~~~ 397 (425)
T 3ecd_A 393 VFEAL 397 (425)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87665
No 136
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.34 E-value=4.8e-11 Score=133.38 Aligned_cols=135 Identities=13% Similarity=0.008 Sum_probs=95.0
Q ss_pred cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCc
Q psy11047 222 TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 301 (943)
Q Consensus 222 ~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~ 301 (943)
.|..++...+++. .+++++|.+ ..++|+|||+|+..++.+.. .+| +
T Consensus 70 ~y~~~~~~~~l~~----~la~~~~~~------------~~~~~~~gt~a~~~al~~l~----------~~g--------d 115 (456)
T 2ez2_A 70 AYAGSENFYHLER----TVQELFGFK------------HIVPTHQGRGAENLLSQLAI----------KPG--------Q 115 (456)
T ss_dssp CSSSCHHHHHHHH----HHHHHHCCS------------EEEEESSHHHHHHHHHHHHC----------CTT--------C
T ss_pred hcccChhHHHHHH----HHHHHhCCC------------cEEEeCCcHHHHHHHHHHhC----------CCC--------C
Confidence 4555666666665 456777753 47999999999988886541 122 3
Q ss_pred eEEEecCCCc-hHHHHHHHHCCccEEEEecCC----------CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCC-cccc
Q psy11047 302 LVAYCSDQAH-SSVEKAGLIGLVNMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALP-AFLV 369 (943)
Q Consensus 302 ~vV~~S~~aH-ySv~KAa~LG~~~v~~Vp~D~----------~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT-~tGa 369 (943)
+++..+| .+...++.+.+..++.++++. ++.+|+++|+++|+.... ..+.+|+.+...+ .+|.
T Consensus 116 ---i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~ 190 (456)
T 2ez2_A 116 ---YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQ 190 (456)
T ss_dssp ---EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSB
T ss_pred ---EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCc
Confidence 3456677 666777755444778888763 278999999999986531 1135566654444 6787
Q ss_pred ccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 370 VDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 370 IDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
+-| +++|.+ +|++||+ |+++|++|+.
T Consensus 191 ~~~~~~l~~i~~--------------------la~~~~i-------~li~De~~~~ 219 (456)
T 2ez2_A 191 PVSMANMRAVRE--------------------LTEAHGI-------KVFYDATRCV 219 (456)
T ss_dssp CCCHHHHHHHHH--------------------HHHHTTC-------CEEEECTTHH
T ss_pred cCCHHHHHHHHH--------------------HHHHcCC-------eEEEEccccc
Confidence 655 889998 9999999 9999999875
No 137
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.34 E-value=3.2e-10 Score=124.95 Aligned_cols=137 Identities=12% Similarity=-0.084 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHh-CCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 233 EIITMNWLGKMI-GLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 233 E~~Vi~wLa~Ll-G~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
...+.+.+++++ | +.. ...+||+|||+|+..++..||... + +.-+++.+..-|
T Consensus 86 ~~~l~~~la~~~~~-~~~---------~~v~~~~g~~~a~~~~~~~a~~~~-~---------------~~~vi~~~p~y~ 139 (426)
T 1sff_A 86 YLELCEIMNQKVPG-DFA---------KKTLLVTTGSEAVENAVKIARAAT-K---------------RSGTIAFSGAYH 139 (426)
T ss_dssp HHHHHHHHHHHSSC-SSC---------EEEEEESSHHHHHHHHHHHHHHHH-T---------------CCEEEEETTCCC
T ss_pred HHHHHHHHHHhCCc-ccc---------cEEEEeCchHHHHHHHHHHHHHhh-C---------------CCeEEEECCCcC
Confidence 345666778888 4 221 257999999999999988776421 1 123555666677
Q ss_pred hHHHHHHHH-CCc------------cEEEEecCC-----CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc-
Q psy11047 312 SSVEKAGLI-GLV------------NMRYIESDD-----KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS- 372 (943)
Q Consensus 312 ySv~KAa~L-G~~------------~v~~Vp~D~-----~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp- 372 (943)
.+...++.+ |.. .++.++.+. .+.+|+++|+++|+... .+..+.+|+.+....++|.+.|
T Consensus 140 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~ 218 (426)
T 1sff_A 140 GRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASS 218 (426)
T ss_dssp CSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCC
T ss_pred CCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCC
Confidence 666666543 321 277788753 34589999999997421 0112556666544444896666
Q ss_pred ---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 ---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 ---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|+++
T Consensus 219 ~~~l~~l~~--------------------l~~~~~~-------~li~De~~~~~ 245 (426)
T 1sff_A 219 PAFMQRLRA--------------------LCDEHGI-------MLIADEVQSGA 245 (426)
T ss_dssp HHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHHHHHHH--------------------HHHHcCC-------EEEEechhhcc
Confidence 888888 9999999 99999999965
No 138
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.34 E-value=1.8e-11 Score=133.87 Aligned_cols=300 Identities=10% Similarity=0.050 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
...+|..+.+++++++|.+.. -+++++||+||..++.+.. .+| -.|+++.
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~-----------~v~~~sGs~a~~~a~~~~~----------~~g---------d~v~~~~ 123 (420)
T 3gbx_A 74 VDVVEQLAIDRAKELFGADYA-----------NVQPHSGSQANFAVYTALL----------QPG---------DTVLGMN 123 (420)
T ss_dssp CHHHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHC----------CTT---------CEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCc-----------eeEecCcHHHHHHHHHHhc----------CCC---------CEEEecc
Confidence 456788888999999998643 3445667999988876531 122 2466777
Q ss_pred CCchHHHHH-HH---HCC-ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccc
Q psy11047 309 QAHSSVEKA-GL---IGL-VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVK 383 (943)
Q Consensus 309 ~aHySv~KA-a~---LG~-~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~ 383 (943)
.+|.+.... .. .|. .....++.++++.+|+++|+++|+... +.+|+.+.++ .|...|+++|.+
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~~~~~~l~~l~~----- 191 (420)
T 3gbx_A 124 LAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHK-----PKMIIGGFSA--YSGVVDWAKMRE----- 191 (420)
T ss_dssp EC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHC-----CSEEEECCTT--CCSCCCHHHHHH-----
T ss_pred hhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcC-----CeEEEEecCc--cCCccCHHHHHH-----
Confidence 788774422 21 222 245566778889999999999998741 4566665433 367888999999
Q ss_pred ccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccc
Q psy11047 384 GLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 384 d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~ 463 (943)
+|++||+ ++++|.+++.. .+ . .|. .
T Consensus 192 ---------------l~~~~~~-------~li~De~~~~~-~~--~----------------------------~~~--~ 216 (420)
T 3gbx_A 192 ---------------IADSIGA-------YLFVDMAHVAG-LI--A----------------------------AGV--Y 216 (420)
T ss_dssp ---------------HHHHTTC-------EEEEECTTTHH-HH--H----------------------------TTS--S
T ss_pred ---------------HHHHcCC-------EEEEECCcchh-ce--e----------------------------ccc--C
Confidence 9999999 99999997543 11 0 000 0
Q ss_pred cchhhhhcCCCCeeEEEEcCCCccC-ccCcchhhhhcccCc---cccccCCCCcccccCccccCCCCC-cchHHHHHHHH
Q psy11047 464 VPASLRIQGLGRAQNFTIVPSSLLR-VKNSGALHRTFNVEP---LYLRHENSGLAIDYMHWQIPLSKR-FRALKLWFVIR 538 (943)
Q Consensus 464 p~~r~~l~Gie~ADSItiDpHK~L~-vr~~~~L~~af~~~p---~YL~~~~~g~~~d~~~~tie~SRr-frALklW~tLr 538 (943)
+. .+..+|.++.++||+++ .+. +.+. ... .+...-... ...++ .++-. .....++..+.
T Consensus 217 ~~------~~~~~di~~~s~sK~~~g~~g-g~~~----~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~a~~~a~~ 280 (420)
T 3gbx_A 217 PN------PVPHAHVVTTTTHKTLAGPRG-GLIL----AKGGDEELYKKLNSA----VFPSA-QGGPLMHVIAGKAVALK 280 (420)
T ss_dssp CC------STTTSSEEEEESSGGGCSCSC-EEEE----ESSCCHHHHHHHHHH----HC-----CCCCHHHHHHHHHHHH
T ss_pred Cc------ccccCCEEEeecccCCCCCCc-eEEE----EcCCcHHHHHHhhhh----cCCCC-CCCcchhHHHHHHHHHH
Confidence 00 12347999999999984 322 1110 000 000000000 00000 01111 11112222222
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCC
Q psy11047 539 NFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDP 618 (943)
Q Consensus 539 ~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p 618 (943)
.....++.+..++ ..++++++.+.|.+ .
T Consensus 281 ~~~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~L~~-~ 308 (420)
T 3gbx_A 281 EAMEPEFKVYQQQ---------------------------------------------------VAKNAKAMVEVFLN-R 308 (420)
T ss_dssp HTTSHHHHHHHHH---------------------------------------------------HHHHHHHHHHHHHH-T
T ss_pred HHHhHhHHHHHHH---------------------------------------------------HHHHHHHHHHHHHh-c
Confidence 2222333333333 23456677777766 5
Q ss_pred CeEEecC-CCccEEEEEecCCChHHHHHHHHHhccCcEEEeec-------ccCCCcEEEEeecC----CCCHHHHHHHHH
Q psy11047 619 RFEIPAA-RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPA-------SLRIQGLGRAQNFT----RTTNDDITRDWN 686 (943)
Q Consensus 619 ~~eIl~~-~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t-------~~~g~~~lR~v~~~----~tt~edId~ll~ 686 (943)
+++++.+ ...+++.+.+.+...-...+.+.|.++|. ++.+. ..-+...+|+.+.. ..++++|+++++
T Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~ 387 (420)
T 3gbx_A 309 GYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANI-TVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAG 387 (420)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTE-ECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred CCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCc-EeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHH
Confidence 7888754 46777777775422124567777777775 44431 11223459995433 356899999999
Q ss_pred HHHHHHHH
Q psy11047 687 EIRNTATE 694 (943)
Q Consensus 687 ~I~~~~~~ 694 (943)
.|+++..+
T Consensus 388 ~l~~~l~~ 395 (420)
T 3gbx_A 388 WMCDVLDN 395 (420)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99887654
No 139
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.34 E-value=9.4e-11 Score=127.46 Aligned_cols=287 Identities=10% Similarity=-0.008 Sum_probs=171.5
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+.+|+++|.+.+ ..++|+|||+++..++.+.. .+| +-.|++++-+|.+.
T Consensus 62 ~lr~~la~~~~~~~~----------~v~~~~G~~~ai~~~~~~~~----------~~g--------~d~Vl~~~p~~~~~ 113 (356)
T 1fg7_A 62 AVIENYAQYAGVKPE----------QVLVSRGADEGIELLIRAFC----------EPG--------KDAILYCPPTYGMY 113 (356)
T ss_dssp HHHHHHHHHHTSCGG----------GEEEESHHHHHHHHHHHHHC----------CTT--------TCEEEECSSSCTHH
T ss_pred HHHHHHHHHhCCChH----------HEEEcCCHHHHHHHHHHHHh----------CCC--------CCEEEEeCCChHHH
Confidence 355567777888654 58999999999987766531 111 02467778899988
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccC
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQT 394 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~R 394 (943)
..++..-+.+++.+|.++++.+|+++|+++++ + +.+|+.+...+.+|.+-|.+++.+
T Consensus 114 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~---------------- 170 (356)
T 1fg7_A 114 SVSAETIGVECRTVPTLDNWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRT---------------- 170 (356)
T ss_dssp HHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHH----------------
T ss_pred HHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHH----------------
Confidence 88875333478888988788999999988875 2 566777788888999977666555
Q ss_pred chHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCC
Q psy11047 395 NFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLG 474 (943)
Q Consensus 395 rfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie 474 (943)
+...|+ +|+ ++++|.+|+.+ ... ......+. ..
T Consensus 171 -l~~~~~-~~~-------~li~De~~~~~-~~~------------------------------------~~~~~~~~-~~ 203 (356)
T 1fg7_A 171 -LLELTR-GKA-------IVVADEAYIEF-CPQ------------------------------------ASLAGWLA-EY 203 (356)
T ss_dssp -HHHHHT-TTC-------EEEEECTTGGG-SGG------------------------------------GCSGGGTT-TC
T ss_pred -HHHhCC-CCC-------EEEEEccchhh-cCC------------------------------------CcHHHHHh-hC
Confidence 011566 899 99999999865 100 00000011 11
Q ss_pred CeeEEEEcCCCccCc---cCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy11047 475 RAQNFTIVPSSLLRV---KNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHIRE 551 (943)
Q Consensus 475 ~ADSItiDpHK~L~v---r~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I~~ 551 (943)
..+-+..++||+++. |-+..+ .++..+..-.. -...|+ ...+..++....+...++. .+++
T Consensus 204 ~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~~~~l~~----~~~~~~------~~~~~~~a~~~~l~~~~~~-~~~~ 267 (356)
T 1fg7_A 204 PHLAILRTLSKAFALAGLRCGFTL-----ANEEVINLLMK----VIAPYP------LSTPVADIAAQALSPQGIV-AMRE 267 (356)
T ss_dssp TTEEEEEESSSTTCCGGGCCEEEE-----ECHHHHHHHHH----HSCSSC------SCHHHHHHHHHHTSHHHHH-HHHH
T ss_pred CCEEEEecchHhhcCchhhhEEEE-----eCHHHHHHHHH----hcCCCC------CCHHHHHHHHHHhcCccHH-HHHH
Confidence 236778899999873 222111 01111100000 000111 1233344444444333331 1222
Q ss_pred HHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccEE
Q psy11047 552 IFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMV 631 (943)
Q Consensus 552 ~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV 631 (943)
..+ . ..+.++++.+.|++.+++....+...+.+
T Consensus 268 ~~~-------------------~----------------------------~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 300 (356)
T 1fg7_A 268 RVA-------------------Q----------------------------IIAEREYLIAALKEIPCVEQVFDSETNYI 300 (356)
T ss_dssp HHH-------------------H----------------------------HHHHHHHHHHHHHHSTTEEEECCCSSSEE
T ss_pred HHH-------------------H----------------------------HHHHHHHHHHHHHhCCCceEECCCCCeEE
Confidence 110 0 23456677777877776544456677788
Q ss_pred EEEecCCChHHHHHHHHHhccCcEEEee-ccc-CCCcEEEEeecCCCCHHHHHHHHHHHHH
Q psy11047 632 VIRLLGENILTEKLLKRLNSKGRLHCVP-ASL-RIQGLGRAQNFTRTTNDDITRDWNEIRN 690 (943)
Q Consensus 632 ~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~-t~~-~g~~~lR~v~~~~tt~edId~ll~~I~~ 690 (943)
.+++. + ..++.++|.++|. .+.+ ... ...+++|++++ +++|++++++.|++
T Consensus 301 ~~~~~--~--~~~l~~~L~~~gI-~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 301 LARFK--A--SSAVFKSLWDQGI-ILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp EEEET--T--HHHHHHHHHHTTE-ECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred EEECC--C--HHHHHHHHHHCCE-EEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 88875 2 4678888877775 4444 222 12458999765 58999999988865
No 140
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.34 E-value=4.2e-11 Score=136.59 Aligned_cols=126 Identities=11% Similarity=0.012 Sum_probs=94.1
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++| +++++++|.+. .+++++|++|+..++.+.. .+| -.|
T Consensus 112 ~~~~~~~l~----~~lA~l~g~~~------------~v~~~sG~~Ai~~al~~l~----------~~G---------d~V 156 (445)
T 1qgn_A 112 GNPTTVVLE----EKISALEGAES------------TLLMASGMCASTVMLLALV----------PAG---------GHI 156 (445)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE------------EEEESCHHHHHHHHHHHHS----------CSS---------CEE
T ss_pred CChHHHHHH----HHHHHHhCCCc------------EEEeCCHHHHHHHHHHHHh----------CCC---------CEE
Confidence 345555555 56788888752 4677777899988876421 122 246
Q ss_pred EecCCCchHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCc-EEEEEecCCCcccccccHHHhhhh
Q psy11047 305 YCSDQAHSSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIP-FFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 305 ~~S~~aHySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P-~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
+++...|.++...+ ...+..++.++.+ |+++|+++|+++ + .+|+....++.+|.+.|+++|++
T Consensus 157 i~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~------tv~lV~le~p~NptG~v~dl~~I~~- 224 (445)
T 1qgn_A 157 VTTTDCYRKTRIFIETILPKMGITATVIDPA-----DVGALELALNQK------KVNLFFTESPTNPFLRCVDIELVSK- 224 (445)
T ss_dssp EEETTSCHHHHHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHS------CEEEEEEESSCTTTCCCCCHHHHHH-
T ss_pred EEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccC------CCCEEEEeCCCCCCCcccCHHHHHH-
Confidence 77788898877653 2223477888774 899999999864 4 67888888999999999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|++|+..
T Consensus 225 -------------------la~~~g~-------~livD~a~~~~ 242 (445)
T 1qgn_A 225 -------------------LCHEKGA-------LVCIDGTFATP 242 (445)
T ss_dssp -------------------HHHHTTC-------EEEEECTTTCT
T ss_pred -------------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999754
No 141
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.33 E-value=9.9e-11 Score=128.90 Aligned_cols=142 Identities=6% Similarity=-0.052 Sum_probs=106.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|.......++...+.+|+.+.+|++-.. ....++|+|||+|+..++.+.. .+| -
T Consensus 63 y~~~~g~~~lr~~la~~~~~~~g~~~~~-------~~~i~~~~g~~~a~~~~~~~~~----------~~g---------d 116 (422)
T 3fvs_A 63 YTKTFGYPPLTKILASFFGELLGQEIDP-------LRNVLVTVGGYGALFTAFQALV----------DEG---------D 116 (422)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTCCCCH-------HHHEEEESHHHHHHHHHHHHHC----------CTT---------C
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCC-------CCcEEEECChHHHHHHHHHHHc----------CCC---------C
Confidence 3333445788889999999999976320 0158999999999988876531 122 2
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCC------------CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDD------------KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~------------~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
.|++..-+|.++..++...+.+++.++.+. ++.+|+++|+++++.+ +.+|+.+...+.+|.+
T Consensus 117 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~ 190 (422)
T 3fvs_A 117 EVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTPNNPLGKV 190 (422)
T ss_dssp EEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEESSCTTTCCC
T ss_pred EEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECCCCCCCCcC
Confidence 366677788888887754445788888865 3479999999988643 5677777788889988
Q ss_pred c---cHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 D---SYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 D---pL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
- ++++|++ +|++||+ ++++|.+|+++
T Consensus 191 ~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 219 (422)
T 3fvs_A 191 FSREELELVAS--------------------LCQQHDV-------VCITDEVYQWM 219 (422)
T ss_dssp CCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred CCHHHHHHHHH--------------------HHHHcCc-------EEEEEccchhh
Confidence 7 4888888 9999999 99999999875
No 142
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.33 E-value=2.3e-10 Score=128.02 Aligned_cols=138 Identities=10% Similarity=0.027 Sum_probs=99.2
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 224 ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 224 ~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
..++...++|. .+++++|.+ ..++++|||+||..++.+.+...+... . ..+.-.
T Consensus 59 ~~~~~~~~l~~----~la~~~g~~------------~~i~~~sGt~a~~~al~~l~~~~~~~~-----~-----~~~gd~ 112 (437)
T 3bb8_A 59 TTGRFNDAFEK----KLGEYLGVP------------YVLTTTSGSSANLLALTALTSPKLGVR-----A-----LKPGDE 112 (437)
T ss_dssp BSCHHHHHHHH----HHHHHHTCS------------EEEEESCHHHHHHHHHHHTTCGGGGGG-----S-----CCTTCE
T ss_pred CCChHHHHHHH----HHHHHHCCC------------cEEEeCCHHHHHHHHHHHhhhcccccc-----c-----CCCcCE
Confidence 34455555554 567778875 368999999999888876421100000 0 011235
Q ss_pred EEecCCCchHHHHHHHHCCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccc
Q psy11047 304 AYCSDQAHSSVEKAGLIGLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIV 382 (943)
Q Consensus 304 V~~S~~aHySv~KAa~LG~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~ 382 (943)
|+++..+|.+...++...+..++.++++. ++.+|+++|+++|+.+ +.+|+.+. .+|...|+++|.+
T Consensus 113 Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~---- 179 (437)
T 3bb8_A 113 VITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRR---- 179 (437)
T ss_dssp EEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHH----
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHH----
Confidence 78899999999998865445788888875 7899999999988643 55666654 5678899999999
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+++|+ ++|+|+|++.+
T Consensus 180 ----------------l~~~~~~-------~li~D~a~~~g 197 (437)
T 3bb8_A 180 ----------------VADKYNL-------WLIEDCCDALG 197 (437)
T ss_dssp ----------------HHHHHTC-------EEEEECTTCTT
T ss_pred ----------------HHHHcCC-------EEEEECccccC
Confidence 9999999 99999999844
No 143
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.32 E-value=7.2e-11 Score=127.78 Aligned_cols=137 Identities=6% Similarity=-0.177 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEec
Q psy11047 228 ACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS 307 (943)
Q Consensus 228 aateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S 307 (943)
...+++..+.+|+.+.+|.+.. ....+||+|||+++..++.+.. .++ ..-.|++.
T Consensus 60 g~~~lr~~la~~l~~~~g~~~~--------~~~i~~t~g~~~al~~~~~~~~----------~~~-------~gd~vl~~ 114 (376)
T 3ezs_A 60 FEESLRAAQRGFFKRRFKIELK--------ENELISTLGSREVLFNFPSFVL----------FDY-------QNPTIAYP 114 (376)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCC--------GGGEEEESSSHHHHHHHHHHHT----------TTC-------SSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCC--------HHHEEECcCcHHHHHHHHHHHc----------CCC-------CCCEEEEe
Confidence 3578889999999999998421 1368999999999988876532 120 01246677
Q ss_pred CCCchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccc
Q psy11047 308 DQAHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKG 384 (943)
Q Consensus 308 ~~aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d 384 (943)
.-+|.++..++...+.+++.++.++++.+++ +|++++..+ +.+|+.+...+.+|.+-| +.+|.+
T Consensus 115 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~------ 181 (376)
T 3ezs_A 115 NPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQE------VDLVILNSPNNPTGRTLSLEELISWVK------ 181 (376)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHH------CSEEEECSSCTTTCCCCCHHHHHHHHH------
T ss_pred cCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccC------CCEEEEcCCCCCcCCCCCHHHHHHHHH------
Confidence 8899998888865445888999887656666 777777654 456666777888998866 555666
Q ss_pred cccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 385 LGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 385 ~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+.+
T Consensus 182 --------------~~~~~~~-------~li~De~~~~~ 199 (376)
T 3ezs_A 182 --------------LALKHDF-------ILINDECYSEI 199 (376)
T ss_dssp --------------HHHHHTC-------EEEEECTTTTC
T ss_pred --------------HHHHcCc-------EEEEEccchhh
Confidence 8999999 99999999876
No 144
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.32 E-value=7.9e-11 Score=128.93 Aligned_cols=137 Identities=8% Similarity=-0.107 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEec
Q psy11047 228 ACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS 307 (943)
Q Consensus 228 aateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S 307 (943)
...+++..+.+|+.+.+|.+... ....++|+|||+|+..++.+.. .+| -.|++.
T Consensus 62 g~~~l~~~la~~~~~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~~~----------~~g---------d~vl~~ 115 (410)
T 3e2y_A 62 GHPALVKALSCLYGKIYQRQIDP-------NEEILVAVGAYGSLFNSIQGLV----------DPG---------DEVIIM 115 (410)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCT-------TTSEEEESHHHHHHHHHHHHHC----------CTT---------CEEEEE
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC-------CCCEEEeCCcHHHHHHHHHHhc----------CCC---------CEEEEe
Confidence 45788889999999998875320 1368999999999988876531 122 236667
Q ss_pred CCCchHHHHHHHHCCccEEEEecC-----------CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc---ccH
Q psy11047 308 DQAHSSVEKAGLIGLVNMRYIESD-----------DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV---DSY 373 (943)
Q Consensus 308 ~~aHySv~KAa~LG~~~v~~Vp~D-----------~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI---DpL 373 (943)
.-+|.+...++...+.+++.++.+ .++.+|+++|+++++.+ +.+|+.+...+.+|.+ +++
T Consensus 116 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l 189 (410)
T 3e2y_A 116 VPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPHNPLGKVYTRQEL 189 (410)
T ss_dssp ESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHH
T ss_pred CCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCcCHHHH
Confidence 778888887775444477788765 45678999999888543 5677777788889998 678
Q ss_pred HHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 374 CCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 374 ~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
++|++ +|++||+ ++++|.+|+++
T Consensus 190 ~~l~~--------------------~~~~~~~-------~li~De~~~~~ 212 (410)
T 3e2y_A 190 QVIAD--------------------LCVKHDT-------LCISDEVYEWL 212 (410)
T ss_dssp HHHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred HHHHH--------------------HHHHcCc-------EEEEEhhhhhc
Confidence 89998 9999999 99999999876
No 145
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.31 E-value=1.4e-10 Score=128.04 Aligned_cols=139 Identities=9% Similarity=-0.009 Sum_probs=101.6
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
.+...+++..+.+|+.+.+|.+... ....++|+|||+|+..++.+.. .+| -.|+
T Consensus 74 ~~g~~~l~~~ia~~~~~~~g~~~~~-------~~~v~~t~g~~~a~~~~~~~~~----------~~g---------d~Vl 127 (412)
T 2x5d_A 74 SRGIPRLRRAISHWYRDRYDVQIDP-------ESEAIVTIGSKEGLAHLMLATL----------DHG---------DTIL 127 (412)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCT-------TTSEEEESCHHHHHHHHHHHHC----------CTT---------CEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCC-------CcCEEEcCChHHHHHHHHHHhC----------CCC---------CEEE
Confidence 3446788888888888888874210 0268999999999988876531 122 2467
Q ss_pred ecCCCchHHHHHHHHCCccEEEEecCCC-C-CcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhc
Q psy11047 306 CSDQAHSSVEKAGLIGLVNMRYIESDDK-L-SLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAM 380 (943)
Q Consensus 306 ~S~~aHySv~KAa~LG~~~v~~Vp~D~~-g-rmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~ 380 (943)
++.-+|.++..++...+.+++.++.+++ + .+|+++|+++++.+ +.+|+.+...+.+|.+-| +++|.+
T Consensus 128 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~-- 199 (412)
T 2x5d_A 128 VPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQCVELDFFERVVA-- 199 (412)
T ss_dssp EEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCCCCHHHHHHHHH--
T ss_pred EcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCcCCHHHHHHHHH--
Confidence 7788999988887533347888888764 3 47889998887632 445666667777898865 677777
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 200 ------------------~~~~~~~-------~li~De~~~~~ 217 (412)
T 2x5d_A 200 ------------------LAKQYDV-------MVVHDLAYADI 217 (412)
T ss_dssp ------------------HHHHHTC-------EEEEECTTTTC
T ss_pred ------------------HHHHcCC-------EEEEecccccc
Confidence 9999999 99999999876
No 146
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.31 E-value=6.4e-11 Score=130.95 Aligned_cols=142 Identities=4% Similarity=-0.122 Sum_probs=105.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|...+...+++..+.+|+.+.+|.+... ....++|+|||+|+..++.+.. .+| -
T Consensus 81 y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~~~v~~t~G~~~al~~~~~~l~----------~~g---------d 134 (404)
T 2o1b_A 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDK-------EDEVCILYGTKNGLVAVPTCVI----------NPG---------D 134 (404)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCT-------TTSEEEESSHHHHHHHHHHHHC----------CTT---------C
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCC-------cccEEEcCCcHHHHHHHHHHhc----------CCC---------C
Confidence 3333456788889999999888986210 0268999999999988876531 122 2
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecCCC-CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhh
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGT 378 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~~-grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~ 378 (943)
.|++..-+|.+...++...+.+++.++.+.+ ..+|+++|+++|+.+ +.+|+.+..++.+|.+-| +++|.+
T Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~ 208 (404)
T 2o1b_A 135 YVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATKEVFDEAIA 208 (404)
T ss_dssp EEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCHHHHHHHHH
Confidence 3666677888888877544457888988753 468999999999643 566776767777898865 677777
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ |+++|.+|+.+
T Consensus 209 --------------------~~~~~~~-------~li~De~~~~~ 226 (404)
T 2o1b_A 209 --------------------KFKGTDT-------KIVHDFAYGAF 226 (404)
T ss_dssp --------------------HHTTSSC-------EEEEECTTTTC
T ss_pred --------------------HHHHcCC-------EEEEEccchhc
Confidence 9999999 99999999876
No 147
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.31 E-value=1.8e-10 Score=130.69 Aligned_cols=127 Identities=12% Similarity=0.059 Sum_probs=97.4
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 224 ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 224 ~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
...|...++|. ++++++|.+ ..+++++||+|+..++.+.. .+| -.
T Consensus 79 ~~~p~~~~le~----~lA~l~g~~------------~~v~~~sG~~Ai~~al~al~----------~~G---------d~ 123 (430)
T 3ri6_A 79 SSNPTVEDLEQ----RLKNLTGAL------------GVLALGSGMAAISTAILTLA----------RAG---------DS 123 (430)
T ss_dssp -CCHHHHHHHH----HHHHHHTCS------------EEEEESCHHHHHHHHHHHHC----------CTT---------CE
T ss_pred CCCHHHHHHHH----HHHHHHCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CE
Confidence 34577777765 567888874 36788899999988876531 122 24
Q ss_pred EEecCCCchHHHHH----HHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhh
Q psy11047 304 AYCSDQAHSSVEKA----GLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTA 379 (943)
Q Consensus 304 V~~S~~aHySv~KA----a~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~ 379 (943)
|++++..|.+.... +...+..++.|+.+ |+++|+++|+.+ +.+|+....++.+|.+.|+++|++
T Consensus 124 Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~- 191 (430)
T 3ri6_A 124 VVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSK- 191 (430)
T ss_dssp EEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH-
T ss_pred EEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHH-
Confidence 77888999887773 33334478888875 899999998753 678888888899999999999999
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+++|+ ++++|.+|+..
T Consensus 192 -------------------la~~~g~-------~livD~a~~~~ 209 (430)
T 3ri6_A 192 -------------------VVHAKGI-------PLVVDTTMTPP 209 (430)
T ss_dssp -------------------HHHTTTC-------CEEEECTTSCT
T ss_pred -------------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999755
No 148
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.31 E-value=5.6e-10 Score=120.75 Aligned_cols=281 Identities=7% Similarity=-0.054 Sum_probs=170.6
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+++++++|.+.+ ..++|+|||+|+..++.+.. .+| -.|+++.-+|.++
T Consensus 69 ~lr~~la~~~g~~~~----------~i~~t~g~~~al~~~~~~l~----------~~g---------d~Vl~~~p~~~~~ 119 (360)
T 3hdo_A 69 KLREVAGELYGFDPS----------WIIMANGSDEVLNNLIRAFA----------AEG---------EEIGYVHPSYSYY 119 (360)
T ss_dssp HHHHHHHHHHTCCGG----------GEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEESSSCTHH
T ss_pred HHHHHHHHHhCcCcc----------eEEEcCCHHHHHHHHHHHHh----------CCC---------CEEEEcCCChHHH
Confidence 456677888887544 68999999999988776431 122 2366778899998
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccC
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQT 394 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~R 394 (943)
..++...+.+++.++.++++.+ +++++.+ .+.+++.+...+.+|.+-|++++.+
T Consensus 120 ~~~~~~~g~~~~~v~~~~~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~---------------- 173 (360)
T 3hdo_A 120 GTLAEVQGARVRTFGLTGDFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDE---------------- 173 (360)
T ss_dssp HHHHHHHTCEEEEECBCTTSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHH----------------
T ss_pred HHHHHHCCCEEEEeeCCCCCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHH----------------
Confidence 8877543348889999877766 3332211 1346777778888999999999999
Q ss_pred chHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcCCC
Q psy11047 395 NFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLG 474 (943)
Q Consensus 395 rfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~Gie 474 (943)
+|+++|+ ++++|.+|+.+ .-. ...+ . ... .
T Consensus 174 ----l~~~~~~-------~li~De~~~~~-~~~---------------------------------~~~~-~---~~~-~ 203 (360)
T 3hdo_A 174 ----LARRCAG-------MLVLDETYAEF-AES---------------------------------NALE-L---VRR-H 203 (360)
T ss_dssp ----HHHHBSS-------EEEEECTTGGG-SSC---------------------------------CCTH-H---HHH-C
T ss_pred ----HHHHCCC-------EEEEECChHhh-CCc---------------------------------chhH-H---hcc-C
Confidence 9999999 99999999864 110 0011 0 000 1
Q ss_pred CeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHH-HHHHHHH
Q psy11047 475 RAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIK-GLQKHIR 550 (943)
Q Consensus 475 ~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~-Gl~~~I~ 550 (943)
..+-+..++||+++... ...+ ..+..+..-... ...|+ ...+..++....+-.. .+.+..+
T Consensus 204 ~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~~~~~~~~----~~~~~------~~~~~~~a~~~~l~~~~~~~~~~~ 268 (360)
T 3hdo_A 204 ENVVVTRTLSKSYSLAGMRIGLAI-----ARPEVIAALDKI----RDHYN------LDRLAQAACVAALRDQAYLSECCR 268 (360)
T ss_dssp SSEEEEEESTTTTSCTTSCCEEEE-----CCHHHHHHHHHH----SCSCC------SCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCEEEEecchHhhcCCccceeeEe-----eCHHHHHHHHHh----CCCCC------CCHHHHHHHHHHhcCHHHHHHHHH
Confidence 23466779999986221 2111 011111000000 00011 1223333333333211 1222222
Q ss_pred HHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCccE
Q psy11047 551 EIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGM 630 (943)
Q Consensus 551 ~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~i 630 (943)
+ ..++++++.+.|.+. ++++. ++..+.
T Consensus 269 ~---------------------------------------------------~~~~~~~l~~~L~~~-~~~~~-~~~~~~ 295 (360)
T 3hdo_A 269 R---------------------------------------------------IRETREWFTTELRSI-GYDVI-PSQGNY 295 (360)
T ss_dssp H---------------------------------------------------HHHHHHHHHHHHHHT-TCEEC-CCSSSE
T ss_pred H---------------------------------------------------HHHHHHHHHHHHHHC-CCEEc-CCCccE
Confidence 2 234566777777766 77765 556777
Q ss_pred EEEEecCCChHHHHHHHHHhccCcEEEeecc-cCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 631 VVIRLLGENILTEKLLKRLNSKGRLHCVPAS-LRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 631 V~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+.|++.+.+ ...+.+.|.++|. ++.+.. ..+..++|++++ +++|+++++++|+++.+.
T Consensus 296 ~~~~~~~~~--~~~l~~~l~~~gi-~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 296 LFATPPDRD--GKRVYDGLYARKV-LVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp EEEECTTCC--HHHHHHHHHHTTE-ECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCC--HHHHHHHHHHCCE-EEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhcc
Confidence 888876543 4678888888885 454432 233578999765 899999999999887643
No 149
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.31 E-value=8.6e-11 Score=130.71 Aligned_cols=153 Identities=5% Similarity=-0.108 Sum_probs=99.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCc----hhh-h
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPEL----EHA-E 297 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl----~~~-~ 297 (943)
|.......+++..+.+|+.+..|++-. ....+||+|||+|+..++.+.. .+|- ... +
T Consensus 79 y~~~~g~~~lr~~ia~~l~~~~g~~~~--------~~~i~~t~G~t~al~~~~~~l~----------~~gd~~~~~~~~~ 140 (444)
T 3if2_A 79 YSNPQGDSAFIDALVGFFNRHYDWNLT--------SENIALTNGSQNAFFYLFNLFG----------GAFVNEHSQDKES 140 (444)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCC--------GGGEEEESSHHHHHHHHHHHSS----------EEEECC-------
T ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCC--------HHHEEEecCcHHHHHHHHHHHh----------CCCcccccccccc
Confidence 444444678999999999888887532 1368999999999988876531 0110 000 0
Q ss_pred cCCceEEEec-CCCchHHHHHH----HH--CCccEEEEecCC-CC----CcCHHHHHHHHHHhhccCCCcEEEEEecCCC
Q psy11047 298 INSRLVAYCS-DQAHSSVEKAG----LI--GLVNMRYIESDD-KL----SLRGDKLIEAIERDKKKHLIPFFIFSGLALP 365 (943)
Q Consensus 298 i~~~~vV~~S-~~aHySv~KAa----~L--G~~~v~~Vp~D~-~g----rmD~daLe~aI~~d~~kG~~P~~VVaTaGTT 365 (943)
......|+++ .-+|.+...++ .+ ....+..+++++ +| .+|+++|++++..... .+.+|+.+...+
T Consensus 141 ~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~---~~~~v~i~~p~n 217 (444)
T 3if2_A 141 KSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG---RIGAICCSRPTN 217 (444)
T ss_dssp CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT---CEEEEEEESSCT
T ss_pred ccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC---CceEEEeCCCCC
Confidence 0000124443 44554444332 11 223677788775 33 7999999998543111 256777777788
Q ss_pred ccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 366 AFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 366 ~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+|.+-| +.+|.+ +|++||+ ++|+|.+|+..
T Consensus 218 ptG~~~~~~~l~~i~~--------------------~a~~~~~-------~li~De~~~~~ 251 (444)
T 3if2_A 218 PTGNVLTDEEMAHLAE--------------------IAKRYDI-------PLIIDNAYGMP 251 (444)
T ss_dssp TTCCCCCHHHHHHHHH--------------------HHHHTTC-------CEEEECTTCTT
T ss_pred CCCCcCCHHHHHHHHH--------------------HHHHCCC-------EEEEECCCCCc
Confidence 8999988 777777 9999999 99999999753
No 150
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.30 E-value=2.2e-10 Score=123.91 Aligned_cols=129 Identities=9% Similarity=-0.088 Sum_probs=89.0
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.| + ..++|+|||+|+..++.++|..... ..+| .+-+++.+..-|.+.
T Consensus 74 ~l~~~la~~~g~~-~----------~v~~~~g~t~a~~~~~~~~~~~~~~----~~~g-------~~~vl~~~~~y~~~~ 131 (375)
T 2eh6_A 74 ELAHKLVKHFWTE-G----------KVFFANSGTESVEAAIKLARKYWRD----KGKN-------KWKFISFENSFHGRT 131 (375)
T ss_dssp HHHHHHHHTSSSC-E----------EEEEESSHHHHHHHHHHHHHHHHHH----TTCC-------CCEEEEEBTCCCCSS
T ss_pred HHHHHHHhhcCCC-C----------eEEEeCchHHHHHHHHHHHHHHhcc----CCCC-------CCEEEEECCCcCCCc
Confidence 4567888989885 3 5899999999999998876532110 0122 123444444446655
Q ss_pred HHHHHHCCc------------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HHHhhh
Q psy11047 315 EKAGLIGLV------------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YCCLGT 378 (943)
Q Consensus 315 ~KAa~LG~~------------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~eIa~ 378 (943)
..+..++.. .+..++. +|+++|+++|+.+ +.+|+.+...+.+|.+.| +++|.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~ 200 (375)
T 2eh6_A 132 YGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQE 200 (375)
T ss_dssp HHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHH
T ss_pred hhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHH
Confidence 555544321 1444443 4899998887642 667777777777899977 899999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|++|+++
T Consensus 201 --------------------~~~~~~~-------~li~De~~~~~ 218 (375)
T 2eh6_A 201 --------------------ICKEKDV-------LLIIDEVQTGI 218 (375)
T ss_dssp --------------------HHHHHTC-------EEEEECTTTTT
T ss_pred --------------------HHHHhCC-------EEEEeccccCC
Confidence 9999999 99999999865
No 151
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.30 E-value=2.6e-10 Score=124.27 Aligned_cols=141 Identities=11% Similarity=-0.030 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHhCCC-ccccccCcCCCC-cEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 228 ACTELEIITMNWLGKMIGLP-EEFLHTKVDSPG-GGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 228 aateLE~~Vi~wLa~LlG~p-~~fl~~~~~~~~-~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
...++...+.+|+++.+|.+ -. .. ..++|+|||+|+..++.+.. .+|- . ..+..|+
T Consensus 67 g~~~lr~~la~~l~~~~g~~~~~--------~~~~i~~t~g~~~al~~~~~~~~----------~~g~--~--~~~d~vl 124 (396)
T 3jtx_A 67 GLPELRQACANWLKRRYDGLTVD--------ADNEILPVLGSREALFSFVQTVL----------NPVS--D--GIKPAIV 124 (396)
T ss_dssp CCHHHHHHHHHHHHHHTTTCCCC--------TTTSEEEESSHHHHHHHHHHHHC----------CC-------CCCCEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCCC--------CCCeEEEcCCcHHHHHHHHHHHh----------CCCC--c--cCCCEEE
Confidence 35788889999999999975 11 13 68999999999988876542 1210 0 0013567
Q ss_pred ecCCCchHHHHHHHHCCccEEEEecCCCC-CcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHH---hhhhcc
Q psy11047 306 CSDQAHSSVEKAGLIGLVNMRYIESDDKL-SLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCC---LGTAMI 381 (943)
Q Consensus 306 ~S~~aHySv~KAa~LG~~~v~~Vp~D~~g-rmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~e---Ia~~~~ 381 (943)
++.-+|.+...++...+.+++.++.++++ .+|+++|++++... +.+|+.+...+.+|.+-|.++ |.+
T Consensus 125 ~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~--- 195 (396)
T 3jtx_A 125 SPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSVLDLDGWKEVFD--- 195 (396)
T ss_dssp EEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCCCCHHHHHHHHH---
T ss_pred EcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCCCCCCcCCHHHHHHHHH---
Confidence 77889998888875544588889886544 68999999999764 567777777888999876555 777
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+.+
T Consensus 196 -----------------~~~~~~~-------~li~De~~~~~ 213 (396)
T 3jtx_A 196 -----------------LQDKYGF-------IIASDECYSEI 213 (396)
T ss_dssp -----------------HHHHHCC-------EEEEECTTTTC
T ss_pred -----------------HHHHcCC-------EEEEEcccccc
Confidence 9999999 99999999876
No 152
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.29 E-value=1.9e-10 Score=125.72 Aligned_cols=130 Identities=10% Similarity=-0.053 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 233 EIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 233 E~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
..++.+++++++|.+ ..+||+|||+||..++.+++...... + .+| ++-+++.+..-|.
T Consensus 83 ~~~l~~~la~~~~~~------------~v~~~~gg~~a~~~al~~~~~~~~~~-~--~~g-------~~~vi~~~~~y~~ 140 (406)
T 4adb_A 83 VLRLAKKLIDATFAD------------RVFFCNSGAEANEAALKLARKFAHDR-Y--GSH-------KSGIVAFKNAFHG 140 (406)
T ss_dssp HHHHHHHHHHHSSCS------------EEEEESSHHHHHHHHHHHHHHHHHHH-T--CTT-------CCEEEEETTCCCC
T ss_pred HHHHHHHHHhhCCCC------------eEEEeCcHHHHHHHHHHHHHHHHHhc-C--CCC-------CcEEEEECCCcCC
Confidence 445667889998754 47999999999999998876532211 0 011 2446666777777
Q ss_pred HHHHHHHHCC------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc-----ccHHH
Q psy11047 313 SVEKAGLIGL------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV-----DSYCC 375 (943)
Q Consensus 313 Sv~KAa~LG~------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI-----DpL~e 375 (943)
+...+..++. ..+..+|.+ |+++|+++|+.+ +.+|+.+ ..+.+|.+ +++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~ 208 (406)
T 4adb_A 141 RTLFTVSAGGQPAYSQDFAPLPADIRHAAYN-----DINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQG 208 (406)
T ss_dssp SSHHHHHHSSCGGGTGGGCSCCSSEEEECTT-----CHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHH
T ss_pred CcHHHhhccCCccccccCCCCCCCceEeCCC-----cHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHH
Confidence 6666655543 245555543 689998888632 5677776 55666643 56889
Q ss_pred hhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 376 LGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 376 Ia~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|.+ +|++||+ ++++|.+|+++
T Consensus 209 l~~--------------------l~~~~~~-------~li~De~~~~~ 229 (406)
T 4adb_A 209 LRE--------------------LCNRHNA-------LLIFDEVQTGV 229 (406)
T ss_dssp HHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred HHH--------------------HHHHcCC-------EEEEeccccCC
Confidence 998 9999999 99999999865
No 153
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.29 E-value=3e-10 Score=124.05 Aligned_cols=289 Identities=11% Similarity=-0.014 Sum_probs=167.0
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
.++.+++++++|. + ..+||+|||+||..|+.+++...... .|.. .++..|++...+|++
T Consensus 81 ~~l~~~la~~~g~-~-----------~v~~~~~gt~a~~~al~~~~~~~~~~-----~~~~----~~~~~vi~~~~~~~~ 139 (392)
T 3ruy_A 81 GPWYEKVAKLTNK-E-----------MVLPMNTGAEAVETAIKTARRWAYDV-----KKVE----ANRAEIIVCEDNFHG 139 (392)
T ss_dssp HHHHHHHHHHHTC-S-----------EEEEESSHHHHHHHHHHHHHHHHHHT-----SCCC----TTCCEEEEETTCCCC
T ss_pred HHHHHHHHHhcCC-C-----------EEEEeCcHHHHHHHHHHHHHHhhhhc-----cCCC----CCCcEEEEEcCCcCC
Confidence 3456788899883 2 57999999999999999876531110 1110 022245555666654
Q ss_pred HHHHH-HHCC------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HHHh
Q psy11047 314 VEKAG-LIGL------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YCCL 376 (943)
Q Consensus 314 v~KAa-~LG~------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~eI 376 (943)
...++ .++. ..+..++.+ |+++|+++|+.+ +.+|+.+...+.+|.+-| +++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i 208 (392)
T 3ruy_A 140 RTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEA 208 (392)
T ss_dssp SSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHH
T ss_pred CCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHH
Confidence 43333 3322 124555543 799999988732 677888778888999988 9999
Q ss_pred hhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhh
Q psy11047 377 GTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLN 456 (943)
Q Consensus 377 a~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~ 456 (943)
.+ +|++||+ ++++|.+|+++ ..
T Consensus 209 ~~--------------------l~~~~~~-------~li~De~~~~~-~~------------------------------ 230 (392)
T 3ruy_A 209 LE--------------------VCKKENV-------LFVADEIQTGL-GR------------------------------ 230 (392)
T ss_dssp HH--------------------HHHTTTC-------EEEEECTTTTT-TT------------------------------
T ss_pred HH--------------------HHHHcCC-------EEEEeechhCC-Cc------------------------------
Confidence 99 9999999 99999999755 21
Q ss_pred ccCcccccchhhhhcCCCCeeEEEEcCCCccCc---cCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHH
Q psy11047 457 SKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRV---KNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKL 533 (943)
Q Consensus 457 ~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~v---r~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALkl 533 (943)
.|.... ....++ ..|.++++ |++.- +-...+ ..+..+..-. ......+-....+.+
T Consensus 231 -~g~~~~----~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~~ 289 (392)
T 3ruy_A 231 -TGKVFA----CDWDNV-TPDMYILG--KALGGGVFPISCAA-----ANRDILGVFE--------PGSHGSTFGGNPLAC 289 (392)
T ss_dssp -TSSSSG----GGGGTC-CCSEEEEC--GGGGTTTSCCEEEE-----ECHHHHTTCC--------TTSSCCSSTTCHHHH
T ss_pred -cccchh----hhccCC-CCCEEEEc--hhhhCChhhhEEEE-----ECHHHHhhhc--------cCCcCCCCCCCHHHH
Confidence 000011 111232 45778775 76542 221111 0111110000 000000001122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHH
Q psy11047 534 WFVIRNFGIKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEAL 613 (943)
Q Consensus 534 W~tLr~~G~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~ 613 (943)
++....+-.....+..++ ..++++++.+.
T Consensus 290 ~a~~~~l~~~~~~~~~~~---------------------------------------------------~~~~~~~l~~~ 318 (392)
T 3ruy_A 290 AVSIAALEVLEEEKLTER---------------------------------------------------SLQLGEKLVGQ 318 (392)
T ss_dssp HHHHHHHHHHHHTTHHHH---------------------------------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHH---------------------------------------------------HHHHHHHHHHH
Confidence 222222211000111111 24567788888
Q ss_pred HhCC--CCeEEecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHH
Q psy11047 614 VLGD--PRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNT 691 (943)
Q Consensus 614 L~~~--p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~ 691 (943)
|++. +.+... ++..+++.|.+.+ ...++.++|.++|. ++.+. +..++|++++..+++++++++++.|+++
T Consensus 319 L~~~~~~~~~~~-~~~g~~~~~~~~~---~~~~l~~~l~~~gi-~v~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 390 (392)
T 3ruy_A 319 LKEIDNPMITEV-RGKGLFIGIELNE---PARPYCEQLKAAGL-LCKET---HENVIRIAPPLVISEEDLEWAFQKIKAV 390 (392)
T ss_dssp HTTCCCTTEEEE-EEETTEEEEEESS---CSHHHHHHHHTTTE-ECCCB---TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCceEE-EeeeeEEEEEEcc---hHHHHHHHHHHCCc-EEecC---CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 8776 334332 3456788888765 24678888888875 45442 3579999988899999999999999876
Q ss_pred H
Q psy11047 692 A 692 (943)
Q Consensus 692 ~ 692 (943)
.
T Consensus 391 l 391 (392)
T 3ruy_A 391 L 391 (392)
T ss_dssp H
T ss_pred h
Confidence 3
No 154
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.29 E-value=7.3e-11 Score=132.59 Aligned_cols=158 Identities=9% Similarity=0.001 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHH
Q psy11047 206 SLLGDMLSDAINC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIR 284 (943)
Q Consensus 206 silgd~L~~alN~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~ 284 (943)
..+.+.+..++.. ....|.......+++..+.+|+.+.+|.+... ...++|+|||+|+..++.+..
T Consensus 73 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~--------~~v~~t~G~~~al~~~~~~l~----- 139 (447)
T 3b46_A 73 QFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA--------ENVTVTTGANEGILSCLMGLL----- 139 (447)
T ss_dssp HHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG--------GGEEEESHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh--------hhEEEeCCHHHHHHHHHHHHc-----
Confidence 3444555555543 12233333345788888999998888864321 268999999999988877531
Q ss_pred hhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecCC------------CCCcCHHHHHHHHHHhhccC
Q psy11047 285 KYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD------------KLSLRGDKLIEAIERDKKKH 352 (943)
Q Consensus 285 ~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~------------~grmD~daLe~aI~~d~~kG 352 (943)
.+| -.|++.+-.|.+...++...+.+++.++.+. ++.+|+++|+++|+.+
T Consensus 140 -----~~g---------d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---- 201 (447)
T 3b46_A 140 -----NAG---------DEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK---- 201 (447)
T ss_dssp -----CTT---------CEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT----
T ss_pred -----CCC---------CEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccC----
Confidence 122 2366667788888887755445788888754 4689999999988632
Q ss_pred CCcEEEEEecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 353 LIPFFIFSGLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 353 ~~P~~VVaTaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+|+.+...+.+|.+ +++++|++ +|++||+ ++++|.+|+++
T Consensus 202 --~~~v~l~~p~nptG~~~~~~~l~~i~~--------------------l~~~~~~-------~li~De~~~~~ 246 (447)
T 3b46_A 202 --TKAVIINTPHNPIGKVFTREELTTLGN--------------------ICVKHNV-------VIISDEVYEHL 246 (447)
T ss_dssp --EEEEEEESSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTC
T ss_pred --CeEEEEeCCCCCCCcccCHHHHHHHHH--------------------HHHHcCc-------EEEEeccchhc
Confidence 5677777888889988 56888888 9999999 99999999876
No 155
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.29 E-value=2.3e-10 Score=123.90 Aligned_cols=287 Identities=10% Similarity=-0.023 Sum_probs=167.5
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+.+++++|.+.+ ..++|+|||+++..++.+. + | + .|++..-+|.++
T Consensus 63 ~l~~~la~~~~~~~~----------~v~~~~g~~~al~~~~~~~-----~-------g--------d-~vl~~~p~y~~~ 111 (364)
T 1lc5_A 63 HLHQALARHHQVPAS----------WILAGNGETESIFTVASGL-----K-------P--------R-RAMIVTPGFAEY 111 (364)
T ss_dssp HHHHHHHHHHTSCGG----------GEEEESSHHHHHHHHHHHH-----C-------C--------S-EEEEEESCCTHH
T ss_pred HHHHHHHHHHCcCHH----------HEEECCCHHHHHHHHHHHc-----C-------C--------C-eEEEeCCCcHHH
Confidence 345566777787643 5899999999998777653 1 1 1 255667788888
Q ss_pred HHHHHHCCccEEEEecCCCCCcCH-HHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccccccccc
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRG-DKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~-daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i 390 (943)
..++...+.+++.+|.+....++. +++.+.+.. .+.+|+.+...+.+|.+-| +++|.+
T Consensus 112 ~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~------------ 173 (364)
T 1lc5_A 112 GRALAQSGCEIRRWSLREADGWQLTDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIAD------------ 173 (364)
T ss_dssp HHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHH------------
T ss_pred HHHHHHcCCeEEEEeCCcccccchhHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHH------------
Confidence 888754445788898875223443 433333321 2455666677888999877 888888
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhh
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRI 470 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l 470 (943)
+|++||+ ++++|.+|+++ .+. +.-..+ .+
T Consensus 174 --------~~~~~~~-------~li~De~~~~~-~~~-------------------------------~~~~~~----~~ 202 (364)
T 1lc5_A 174 --------RCKSLNI-------NLILDEAFIDF-IPH-------------------------------ETGFIP----AL 202 (364)
T ss_dssp --------HHHHHTC-------EEEEECTTGGG-STT-------------------------------CCCSGG----GC
T ss_pred --------HhhhcCc-------EEEEECcChhh-ccC-------------------------------ccchhh----Hh
Confidence 9999999 99999999865 220 000011 01
Q ss_pred cCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHH
Q psy11047 471 QGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQK 547 (943)
Q Consensus 471 ~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~ 547 (943)
+....|-+..++||+++... ...+ ..++..+..-.. -...|+ ...+..++....+... +
T Consensus 203 -~~~~~~i~~~s~sK~~~~~G~r~G~~~----~~~~~~~~~l~~----~~~~~~------~~~~~~~~~~~~l~~~---~ 264 (364)
T 1lc5_A 203 -KDNPHIWVLRSLTKFYAIPGLRLGYLV----NSDDAAMARMRR----QQMPWS------VNALAALAGEVALQDS---A 264 (364)
T ss_dssp -TTCTTEEEEEESTTTTTCTTTCCEEEE----CCCHHHHHHHHH----HSCTTC------SCHHHHHHHHHGGGCH---H
T ss_pred -ccCCCEEEEEECchhhcCCccceEEEE----ECCHHHHHHHHH----hCCCCC------CCHHHHHHHHHHHhCc---H
Confidence 11235788889999987321 1111 011111100000 000111 1233333333333211 1
Q ss_pred HHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCC
Q psy11047 548 HIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARH 627 (943)
Q Consensus 548 ~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~ 627 (943)
.+++..+ . ..++++++.+.|++.|++++. ++.
T Consensus 265 ~~~~~~~-----------------------~------------------------~~~~~~~l~~~L~~~~~~~~~-~~~ 296 (364)
T 1lc5_A 265 WQQATWH-----------------------W------------------------LREEGARFYQALCQLPLLTVY-PGR 296 (364)
T ss_dssp HHHHHHH-----------------------H------------------------HHHHHHHHHHHHHTSTTEEEC-CCS
T ss_pred HHHHHHH-----------------------H------------------------HHHHHHHHHHHHhcCCCCEEC-CCC
Confidence 2222110 0 234567788888888899876 466
Q ss_pred ccEEEEEecCCChHHHHHHHHHhccCcEEEeecc-c--CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 628 LGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS-L--RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 628 l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~-~--~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
.+.+.|++.+. ...+.+.|.++|. ++.+.. . .+..++|+++. +.++++++++.|+++.++
T Consensus 297 g~~~~~~~~~~---~~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 297 ANYLLLRCERE---DIDLQRRLLTQRI-LIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp SSEEEEEESCT---TCCHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC--
T ss_pred CeEEEEECCCc---HHHHHHHHHHCCc-EEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 77788887532 3467777777775 444422 2 23579999754 588999999999887554
No 156
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.28 E-value=3.7e-10 Score=124.92 Aligned_cols=125 Identities=9% Similarity=-0.032 Sum_probs=94.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
.|...++ .+++++++|.+ ..+++++||+|+..++.+.. .+| -.|+
T Consensus 58 ~~~~~~l----~~~la~~~g~~------------~~i~~~sG~~ai~~~~~~~~----------~~g---------d~vl 102 (389)
T 3acz_A 58 NPTVEQF----EEMVCSIEGAA------------GSAAFGSGMGAISSSTLAFL----------QKG---------DHLI 102 (389)
T ss_dssp CHHHHHH----HHHHHHHHTCS------------EEEEESSHHHHHHHHHTTTC----------CTT---------CEEE
T ss_pred ChHHHHH----HHHHHHHhCCC------------eEEEeCCHHHHHHHHHHHHh----------CCC---------CEEE
Confidence 4444444 45678888875 35788889999987765421 122 2477
Q ss_pred ecCCCchHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 306 CSDQAHSSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 306 ~S~~aHySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
++..+|.+...++ ...+.+++.++. .|+++|+++|+++ +.+|+.+..++.+|.+.|+++|++
T Consensus 103 ~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~--- 168 (389)
T 3acz_A 103 AGDTLYGCTVSLFTHWLPRFGIEVDLIDT-----SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAV--- 168 (389)
T ss_dssp EESSCCHHHHHHHHHHHHHTTCEEEEECT-----TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHH---
T ss_pred EeCCCchHHHHHHHHHHHHcCCEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHH---
Confidence 7888999877764 233447788876 3789999888653 568888889999999999999999
Q ss_pred ccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+.+
T Consensus 169 -----------------~~~~~~~-------~livD~~~~~~ 186 (389)
T 3acz_A 169 -----------------VCHERGA-------RLVVDATFTSP 186 (389)
T ss_dssp -----------------HHHHHTC-------EEEEECTTTCT
T ss_pred -----------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999866
No 157
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.28 E-value=3.6e-10 Score=120.17 Aligned_cols=122 Identities=11% Similarity=-0.105 Sum_probs=95.5
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+.+++++|.+.+ ..++|+|+|+++..++.+. +| -.|++++-+|.+.
T Consensus 55 ~lr~~la~~~~~~~~----------~i~~t~G~~~~l~~~~~~~------------~g---------d~vl~~~p~~~~~ 103 (337)
T 3p1t_A 55 RVMRKLAEHFSCPED----------NLMLVRGIDECFDRISAEF------------SS---------MRFVTAWPGFDGY 103 (337)
T ss_dssp HHHHHHHHHHTSCGG----------GEEEESHHHHHHHHHHHHS------------TT---------SEEEEESSSCSHH
T ss_pred HHHHHHHHHhCcCHH----------HEEEeCCHHHHHHHHHHhc------------CC---------CeEEEeCCCcHHH
Confidence 455677888888654 6899999999987766531 12 1367788899998
Q ss_pred HHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccccccC
Q psy11047 315 EKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQT 394 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~R 394 (943)
..++...+.+++.++.++++.+|+++|+++. .+.+++.+...+.+|.+-|++++.+
T Consensus 104 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~---------------- 159 (337)
T 3p1t_A 104 RARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQ---------------- 159 (337)
T ss_dssp HHHHTTSCCEEEEECBCTTSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHH----------------
T ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHH----------------
Confidence 8887554458899999888999999988651 2567888888899999999999999
Q ss_pred chHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 395 NFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 395 rfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+.+++ ++ +|.+|+.+
T Consensus 160 ----l~~~~~~-------~i-vDea~~~~ 176 (337)
T 3p1t_A 160 ----LRQRAGK-------LL-IDETYVDY 176 (337)
T ss_dssp ----HHHHCSE-------EE-EECTTGGG
T ss_pred ----HHHhCCc-------EE-EECCChhh
Confidence 9999987 55 49999854
No 158
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.28 E-value=4.2e-11 Score=133.24 Aligned_cols=118 Identities=10% Similarity=-0.004 Sum_probs=86.7
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+.+|+++|.++ .+++++||+||..++. . + .+| -.|+++...|.++
T Consensus 59 ~lr~~la~~~g~~~------------~i~~~sGt~a~~~al~-~----~------~~g---------d~Vi~~~~~y~~~ 106 (393)
T 1n8p_A 59 NLERAVAALENAQY------------GLAFSSGSATTATILQ-S----L------PQG---------SHAVSIGDVYGGT 106 (393)
T ss_dssp HHHHHHHHHTTCSE------------EEEESCHHHHHHHHHH-T----S------CSS---------CEEEEESSCCHHH
T ss_pred HHHHHHHHHhCCCc------------EEEECChHHHHHHHHH-H----c------CCC---------CEEEEeCCCchHH
Confidence 34556788888752 4677777999987765 2 1 122 2366677788866
Q ss_pred HHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 315 EKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 315 ~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
.... ...+.+++.++.+ | ++|+++|+.+ +.+|+.+..++.+|.+-|+++|++
T Consensus 107 ~~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~------------ 162 (393)
T 1n8p_A 107 HRYFTKVANAHGVETSFTNDL-----L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVAD------------ 162 (393)
T ss_dssp HHHHHHTSTTTCSCCEEESSH-----H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHH------------
T ss_pred HHHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHH------------
Confidence 5543 2223477888875 6 8888877642 678888888899999999999999
Q ss_pred cccCchHHHHHHc----CCCCCccchhhhHHhhhcCC
Q psy11047 391 KLQTNFPNFILSY----FPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 391 ~L~RrfR~iar~~----Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++| |+ ++|+|++|+.+
T Consensus 163 --------la~~~~~~~~~-------~livD~a~~~~ 184 (393)
T 1n8p_A 163 --------LIKKHAAGQDV-------ILVVDNTFLSP 184 (393)
T ss_dssp --------HHHHHTTTTTC-------EEEEECTTTHH
T ss_pred --------HHHHhCCCCCC-------EEEEeCCcccc
Confidence 99999 99 99999999765
No 159
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.27 E-value=1.9e-10 Score=129.70 Aligned_cols=126 Identities=11% Similarity=0.038 Sum_probs=94.8
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++|. .+|+++|.+ ..++++|||+||..++.+. + .+| -.|
T Consensus 80 ~~p~~~~le~----~lA~l~g~~------------~~i~~ssGt~Ai~~al~~l----~------~~G---------d~V 124 (415)
T 2fq6_A 80 GTLTHFSLQQ----AMCELEGGA------------GCVLFPCGAAAVANSILAF----I------EQG---------DHV 124 (415)
T ss_dssp CCHHHHHHHH----HHHHHHTCS------------EEEEESSHHHHHHHHHHTT----C------CTT---------CEE
T ss_pred CCchHHHHHH----HHHHHhCCC------------eEEEeCCHHHHHHHHHHHH----h------CCC---------CEE
Confidence 5577777776 457888864 2578899999998876631 0 122 247
Q ss_pred EecCCCchHHHHHHH--H--CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 305 YCSDQAHSSVEKAGL--I--GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 305 ~~S~~aHySv~KAa~--L--G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
+++...|.+....+. + .+..+..++.+ |+++|+++|+++ +.+|+....++.+|.+-|+++|++
T Consensus 125 i~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~-- 191 (415)
T 2fq6_A 125 LMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVA-- 191 (415)
T ss_dssp EEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHH--
T ss_pred EEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHH--
Confidence 778889998876652 2 23467777764 788888888653 667888888889999999999999
Q ss_pred cccccccccccccCchHHHHHH--cCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILS--YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|+ ++|+|++|+..
T Consensus 192 ------------------la~~~~~g~-------~livD~a~a~~ 211 (415)
T 2fq6_A 192 ------------------AVRSVVPDA-------IIMIDNTWAAG 211 (415)
T ss_dssp ------------------HHHHHCTTC-------EEEEECTTTTT
T ss_pred ------------------HHHhhcCCC-------EEEEECCCccc
Confidence 9999 999 99999999754
No 160
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.26 E-value=3.2e-10 Score=127.60 Aligned_cols=125 Identities=10% Similarity=0.014 Sum_probs=94.7
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..|...++| ++++++.|.+ ..++++||++|+..++.+.. .+| -.|
T Consensus 79 ~~p~~~~l~----~~la~~~g~~------------~~~~~~sG~~Ai~~al~~l~----------~~G---------d~V 123 (414)
T 3ndn_A 79 GNPTVSVFE----ERLRLIEGAP------------AAFATASGMAAVFTSLGALL----------GAG---------DRL 123 (414)
T ss_dssp CCHHHHHHH----HHHHHHHTCS------------EEEEESSHHHHHHHHHHTTC----------CTT---------CEE
T ss_pred CChHHHHHH----HHHHHHHCCC------------cEEEECCHHHHHHHHHHHHh----------CCC---------CEE
Confidence 345555555 5678888863 46899999999877765421 122 246
Q ss_pred EecCCCchHHHHHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhc
Q psy11047 305 YCSDQAHSSVEKAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 305 ~~S~~aHySv~KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~ 380 (943)
+++...|.+...++. ..+..++.++.+ |+++|+++|+.+ +.+|+....++.+|.+.|+++|++
T Consensus 124 i~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~-- 190 (414)
T 3ndn_A 124 VAARSLFGSCFVVCSEILPRWGVQTVFVDGD-----DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTE-- 190 (414)
T ss_dssp EEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHH--
T ss_pred EEcCCccchHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHH--
Confidence 778889988776652 134478888875 799999988653 567777888999999999999999
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
+|++||+ ++++|.+|+.
T Consensus 191 ------------------la~~~g~-------~livDe~~~~ 207 (414)
T 3ndn_A 191 ------------------LAHAAGA-------KVVLDNVFAT 207 (414)
T ss_dssp ------------------HHHHTTC-------EEEEECTTTH
T ss_pred ------------------HHHHcCC-------EEEEECCCcc
Confidence 9999999 9999999974
No 161
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.26 E-value=1.3e-10 Score=124.15 Aligned_cols=119 Identities=5% Similarity=-0.150 Sum_probs=90.1
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHH
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVE 315 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~ 315 (943)
+.+.+++++|.++ .+++++||+|+..++.+.. .+| ..|+++..+|.+..
T Consensus 3 l~~~la~~~g~~~------------~i~~~sG~~a~~~~~~~~~----------~~g---------~~v~~~~~~~~~~~ 51 (331)
T 1pff_A 3 LEGKIAKLEHAEA------------CAATASGMGAIAASVWTFL----------KAG---------DHLISDDCLYGCTH 51 (331)
T ss_dssp HHHHHHHHHTCSE------------EEEESSHHHHHHHHHHHHC----------CTT---------CEEEEESCCCHHHH
T ss_pred HHHHHHHHhCCCe------------EEEeCChHHHHHHHHHHhc----------CCC---------CEEEEcCCCcchHH
Confidence 4567788998762 4677777999988776531 122 24777888999987
Q ss_pred HHHH----HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccc
Q psy11047 316 KAGL----IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMK 391 (943)
Q Consensus 316 KAa~----LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~ 391 (943)
.++. ..+..++.++. +|+++|+++|+++ +.+|+.+..++.+|.+.|+++|.+
T Consensus 52 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~------------- 107 (331)
T 1pff_A 52 ALFEHQLRKFGVEVDFIDM-----AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVK------------- 107 (331)
T ss_dssp HHHHTHHHHTTCEEEEECT-----TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHH-------------
T ss_pred HHHHHHHHhcCCEEEEeCC-----CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHH-------------
Confidence 7652 23346777765 4788888887643 668888889999999999999999
Q ss_pred ccCchHHHHHH-cCCCCCccchhhhHHhhhcCC
Q psy11047 392 LQTNFPNFILS-YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 392 L~RrfR~iar~-~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|+ ++++|++|+.+
T Consensus 108 -------~~~~~~~~-------~li~D~a~~~~ 126 (331)
T 1pff_A 108 -------QARKQKDI-------LVIVDNTFASP 126 (331)
T ss_dssp -------HHTTSSSC-------EEEEECTTTHH
T ss_pred -------HHhhhcCC-------EEEEECCCccc
Confidence 9999 999 99999999754
No 162
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.26 E-value=2e-10 Score=125.84 Aligned_cols=132 Identities=11% Similarity=0.035 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
.+...+.+++++++|. + ..+||+|||+|+..++.+++..... . .+| ++-+++.+..-
T Consensus 82 ~~~~~l~~~la~~~g~-~-----------~v~~~~gg~~a~~~al~~~~~~~~~--~--~~~-------~~~vi~~~~~y 138 (397)
T 2ord_A 82 RPQMELAELLSKNTFG-G-----------KVFFANTGTEANEAAIKIARKYGKK--K--SEK-------KYRILSAHNSF 138 (397)
T ss_dssp HHHHHHHHHHHHTTTS-C-----------EEEEESSHHHHHHHHHHHHHHHHHH--H--CTT-------CCEEEEEBTCC
T ss_pred HHHHHHHHHHHHhcCC-C-----------eEEEeCCHHHHHHHHHHHHHHHhhc--C--CCC-------CceEEEEcCCc
Confidence 3445566778888873 2 5799999999999998877642110 0 011 22355566667
Q ss_pred chHHHHHHHH-CCc-----------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccc----cccHH
Q psy11047 311 HSSVEKAGLI-GLV-----------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLV----VDSYC 374 (943)
Q Consensus 311 HySv~KAa~L-G~~-----------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGa----IDpL~ 374 (943)
|.+...++.+ |.. .+..++.+ |+++|+++|+.+ +.+|+.+...+.+|. .++++
T Consensus 139 h~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~ 207 (397)
T 2ord_A 139 HGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLE 207 (397)
T ss_dssp CCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHH
T ss_pred CCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHH
Confidence 7776666643 432 26777763 799999988642 678888878888898 37799
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|.+ +|++||+ ++++|.+|+++
T Consensus 208 ~l~~--------------------l~~~~~~-------~li~De~~~~~ 229 (397)
T 2ord_A 208 EARK--------------------LCDEYDA-------LLVFDEVQCGM 229 (397)
T ss_dssp HHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHH--------------------HHHHcCC-------EEEEEecccCC
Confidence 9999 9999999 99999999865
No 163
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.25 E-value=6.2e-10 Score=123.03 Aligned_cols=322 Identities=7% Similarity=-0.113 Sum_probs=180.8
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH--HHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL--ICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL--~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
..+.++++++.+.+ ..++|+|||+++. .++.+... ..+|-...-....-.|++.+-+|..
T Consensus 75 lr~~ia~~~~~~~~----------~i~~t~G~~~al~~~~~~~~l~~--------~~~g~~~~~~~~gd~Vlv~~p~y~~ 136 (423)
T 3ez1_A 75 ARALFAGYLDVKAE----------NVLVWNNSSLELQGLVLTFALLH--------GVRGSTGPWLSQTPKMIVTVPGYDR 136 (423)
T ss_dssp HHHHHHHHTTSCGG----------GEEECSSCHHHHHHHHHHHHHHT--------CCTTCSSCGGGGCCEEEEEESCCHH
T ss_pred HHHHHHHHhCCChh----------hEEEeCCcHHHHHHHHHHHHHhc--------cCCCccccccCCCCEEEEcCCCcHH
Confidence 44456677777654 6899999999986 55443210 0011000000001346777888988
Q ss_pred HHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEe-cCCCcccccccHH---Hhhhhcccccccccc
Q psy11047 314 VEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSG-LALPAFLVVDSYC---CLGTAMIVKGLGFYK 389 (943)
Q Consensus 314 v~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaT-aGTT~tGaIDpL~---eIa~~~~~~d~~~~~ 389 (943)
...++..-+.+++.+|.+++| +|+++|+++|+... .+.+|+++ ...+.+|.+-|.+ +|++
T Consensus 137 ~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~----------- 200 (423)
T 3ez1_A 137 HFLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTDP----SVKGILFVPTYSNPGGETISLEKARRLAG----------- 200 (423)
T ss_dssp HHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSCT----TEEEEEECSSSCTTTCCCCCHHHHHHHHT-----------
T ss_pred HHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhCC----CceEEEECCCCCCCCCcCCCHHHHHHHHH-----------
Confidence 888775333478889988776 99999999996211 25566544 5678899987766 6776
Q ss_pred ccccCchHHHH-HHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhh
Q psy11047 390 MKLQTNFPNFI-LSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASL 468 (943)
Q Consensus 390 i~L~RrfR~ia-r~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~ 468 (943)
+| ++||+ ++++|.+|+.. .|. . .+.........
T Consensus 201 ---------~a~~~~~~-------~li~De~y~~~-~~~--~---------------------------~~~~~~~~~~~ 234 (423)
T 3ez1_A 201 ---------LQAAAPDF-------TIFADDAYRVH-HLV--E---------------------------EDRAEPVNFVV 234 (423)
T ss_dssp ---------CCCSSTTC-------EEEEECTTSSC-BCC--S---------------------------SSCCCCCCHHH
T ss_pred ---------HHHhccCC-------EEEEECCcchh-hcC--C---------------------------CCCCCCcchhh
Confidence 88 89999 99999999853 220 0 00000001111
Q ss_pred hh--cCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH--
Q psy11047 469 RI--QGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI-- 542 (943)
Q Consensus 469 ~l--~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~-- 542 (943)
.. .+....+-+..++||+++ .|-...+ ..+..+.. +.......+-....+..++....+..
T Consensus 235 ~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~-----~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 301 (423)
T 3ez1_A 235 LARDAGYPDRAFVFASTSKITFAGAGLGFVA-----SSEDNIRW--------LSKYLGAQSIGPNKVEQARHVKFLTEYP 301 (423)
T ss_dssp HHHHHTCTTSEEEEEESTTTSCSSSSCEEEE-----ECHHHHHH--------HHHHHHHSCSCCCHHHHHHHHHHHHHST
T ss_pred hhhccCCCCeEEEEeCchhhccCCcceEEEE-----eCHHHHHH--------HHHHHhhhccCCCHHHHHHHHHHHHhcc
Confidence 00 112334677788999744 2221110 00000000 00000000011223334444444443
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCC-CeE
Q psy11047 543 KGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDP-RFE 621 (943)
Q Consensus 543 ~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p-~~e 621 (943)
..+.+++++..+ .++++ ...+.+.+.+.+...+ .++
T Consensus 302 ~~~~~~~~~~~~-------------------~~~~~------------------------~~~l~~~l~~~l~~~~~~~~ 338 (423)
T 3ez1_A 302 GGLEGLMRDHAA-------------------IIAPK------------------------FRAVDEVLRAELGEGGEYAT 338 (423)
T ss_dssp THHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHHHTTTTSSEE
T ss_pred chHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHhcCcCCCceE
Confidence 344555554211 00000 2334556666666665 577
Q ss_pred EecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEee-cc-c-----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 622 IPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVP-AS-L-----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 622 Il~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~-t~-~-----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+..+...+.+.+++.+.+ .+.+.+.+.++|. ++.+ .. . .+..++|+++... ++++|+++++.|.++..+
T Consensus 339 ~~~p~~g~~~~~~~~~~~--~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 339 WTLPKGGYFISLDTAEPV--ADRVVKLAEAAGV-SLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp ECCCSBSSCEEEEESSSC--HHHHHHHHHHTTE-ECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred EeCCCccEEEEEECCCCc--HHHHHHHHHHCCc-EEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHH
Confidence 776666777888886542 5677788888875 4544 11 1 2467999977555 899999999999988776
Q ss_pred HHH
Q psy11047 695 ILA 697 (943)
Q Consensus 695 ll~ 697 (943)
+..
T Consensus 415 ~~~ 417 (423)
T 3ez1_A 415 ATE 417 (423)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 164
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.24 E-value=1.1e-09 Score=120.03 Aligned_cols=132 Identities=11% Similarity=-0.001 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+|+++++|. + ..+||+|||+||..|+.+++..... +| ..++-+++.+..-
T Consensus 78 ~~~~~l~~~la~~~~~-~-----------~v~~~~gg~ea~~~al~~~~~~~~~------~g-----~~~~~vi~~~~~y 134 (395)
T 3nx3_A 78 ENIAAAAKNLAKASAL-E-----------RVFFTNSGTESIEGAMKTARKYAFN------KG-----VKGGQFIAFKHSF 134 (395)
T ss_dssp HHHHHHHHHHHHHHTC-S-----------EEEEESSHHHHHHHHHHHHHHHHHH------TT-----CTTCEEEEETTCC
T ss_pred HHHHHHHHHHHHhcCC-C-----------eEEEeCCHHHHHHHHHHHHHHHhhc------cC-----CCCCEEEEEcCCc
Confidence 3445566788888873 2 5799999999999999988754321 11 0123455555555
Q ss_pred chHHHHHHHHCC------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HH
Q psy11047 311 HSSVEKAGLIGL------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YC 374 (943)
Q Consensus 311 HySv~KAa~LG~------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~ 374 (943)
|-+..-+..++. ..+..++.+ |+++|+++|+.+ +.+|+.....+++|.+-| ++
T Consensus 135 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~ 203 (395)
T 3nx3_A 135 HGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYK 203 (395)
T ss_dssp CCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHH
T ss_pred CCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHH
Confidence 654443332221 245666653 689998888633 456666665666788766 89
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|++||+ ++|+|.+|.++
T Consensus 204 ~l~~--------------------l~~~~~~-------~li~Dev~~~~ 225 (395)
T 3nx3_A 204 ALRK--------------------LCDEKDI-------LLIADEIQCGM 225 (395)
T ss_dssp HHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHH--------------------HHHHcCC-------EEEEEecccCC
Confidence 9999 9999999 99999999865
No 165
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.22 E-value=1.8e-09 Score=120.38 Aligned_cols=140 Identities=6% Similarity=-0.220 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+..++.++++++++.... ...+||+|||+||..|+.++|... + ++-+|++...
T Consensus 85 ~~~~~~l~~~la~~~~~~~~---------~~v~~~~ggsea~~~al~~~~~~~---------~-------~~~vi~~~~~ 139 (439)
T 3dxv_A 85 NAPAVTLAERLLASFPGEGT---------HKIWFGHSGSDANEAAYRAIVKAT---------G-------RSGVIAFAGA 139 (439)
T ss_dssp EHHHHHHHHHHHHTTTCTTT---------EEEEEESSHHHHHHHHHHHHHHHH---------S-------CCEEEEETTC
T ss_pred CHHHHHHHHHHHHhCCCCCC---------CEEEEeCCHHHHHHHHHHHHHHHh---------C-------CCEEEEECCC
Confidence 34556677889998854321 158999999999999999887421 0 2345666777
Q ss_pred CchHHHHHHHHCCcc--------------EEEEecCCCCCc-----CHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 310 AHSSVEKAGLIGLVN--------------MRYIESDDKLSL-----RGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 310 aHySv~KAa~LG~~~--------------v~~Vp~D~~grm-----D~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
-|.+...++.++... +..+|.+..+.- |+++|+++|+.. ....+.+|+..-..+++|.+
T Consensus 140 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~ 217 (439)
T 3dxv_A 140 YHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLI 217 (439)
T ss_dssp CCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSB
T ss_pred CCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCc
Confidence 777666665443211 234444433333 799999999521 11235566666666667888
Q ss_pred cc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 DS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 Dp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 218 ~~~~~~l~~l~~--------------------l~~~~~~-------~li~DE~~~g~ 247 (439)
T 3dxv_A 218 VPPDGFLRKFAD--------------------ICRAHGI-------LVVCDEVKVGL 247 (439)
T ss_dssp CCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTCT
T ss_pred cCCHHHHHHHHH--------------------HHHHcCC-------EEEEeccccCC
Confidence 77 999999 9999999 99999999865
No 166
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.22 E-value=4.4e-10 Score=124.65 Aligned_cols=313 Identities=9% Similarity=-0.058 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHHh-CCCccccccCcCCCCc---EEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 229 CTELEIITMNWLGKMI-GLPEEFLHTKVDSPGG---GVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 229 ateLE~~Vi~wLa~Ll-G~p~~fl~~~~~~~~~---GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..+++..+.+|+.+.. +.+.+ . .++|+|||+|+..++.+.. .+| -.|
T Consensus 90 ~~~lr~~ia~~~~~~~~~~~~~----------~~~~i~~t~g~~~al~~~~~~l~----------~~g---------d~V 140 (430)
T 2x5f_A 90 IEELRDLWQQKMLRDNPELSID----------NMSRPIVTNALTHGLSLVGDLFV----------NQD---------DTI 140 (430)
T ss_dssp CHHHHHHHHHHHHHHCTTCCGG----------GBCCCEEESHHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred CHHHHHHHHHHHhccCcccCCC----------ccceEEEcCCchHHHHHHHHHHh----------CCC---------CEE
Confidence 5667777777766552 44332 4 7999999999988776531 122 246
Q ss_pred EecCCCchHHHHHHHH-CCccEEEEecCC-CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhh
Q psy11047 305 YCSDQAHSSVEKAGLI-GLVNMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTA 379 (943)
Q Consensus 305 ~~S~~aHySv~KAa~L-G~~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~ 379 (943)
++.+-+|.+...++.. -+.+++.++.+. ++.+|+++|+++|+.. +..+.+++.+...+.+|.+-| +++|.+
T Consensus 141 l~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~- 216 (430)
T 2x5f_A 141 LLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE- 216 (430)
T ss_dssp EEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH-
T ss_pred EEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH-
Confidence 6778889888887754 445788888865 4689999999999863 112667777777888999877 778888
Q ss_pred ccccccccccccccCchHHHHHH-----cCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHH
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILS-----YFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKR 454 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~-----~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~ 454 (943)
+|++ ||+ ++++|.+|+++ .+.
T Consensus 217 -------------------~~~~~~~~~~~~-------~li~De~~~~~-~~~--------------------------- 242 (430)
T 2x5f_A 217 -------------------AIKALANKGTKV-------IAVVDDAYYGL-FYE--------------------------- 242 (430)
T ss_dssp -------------------HHHHHHHTTCEE-------EEEEECTTTTC-BCS---------------------------
T ss_pred -------------------HHHhhhhccCCE-------EEEEehhcccc-cCC---------------------------
Confidence 9999 999 99999999876 320
Q ss_pred hhccCcccccchhhhhcCCCCe---eEEEEcCCCccCccC---cchhhhhcccCccccccCCCCcccccCccccCCCCCc
Q psy11047 455 LNSKGRLHCVPASLRIQGLGRA---QNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRF 528 (943)
Q Consensus 455 l~~~G~~~~p~~r~~l~Gie~A---DSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrf 528 (943)
|. ........+.+.... +-+..++||+++... ...+. ...++..+..-.. . ....... ..-..
T Consensus 243 ----~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~--~~~~~~~~~~l~~-~-~~~~~~~--~~~~~ 311 (430)
T 2x5f_A 243 ----DV-YTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTF--GTSDQTTKEVLEA-K-VKGLIRS--NISSG 311 (430)
T ss_dssp ----SS-CCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEE--BCCCHHHHHHHHH-H-HHHHHHT--TTSSC
T ss_pred ----cc-cchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEE--ecCCHHHHHHHHH-H-Hhhhhhc--ccCCC
Confidence 00 001111012222222 455778999986221 11110 0000111000000 0 0000000 00011
Q ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHH
Q psy11047 529 RALKLWFVIRNFG-IKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 607 (943)
Q Consensus 529 rALklW~tLr~~G-~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA 607 (943)
..+..++....+. ...+.+.+++..+ . ..+..
T Consensus 312 ~~~~~~a~~~~l~~~~~~~~~~~~~~~-----------------------~------------------------~~~~~ 344 (430)
T 2x5f_A 312 PLPTQSAVKHVLKNNKQFDKEIEQNIQ-----------------------T------------------------LKERY 344 (430)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHHHHHHH-----------------------H------------------------HHHHH
T ss_pred ChHHHHHHHHHHccChHHHHHHHHHHH-----------------------H------------------------HHHHH
Confidence 2333343444433 2233333332210 0 23456
Q ss_pred HHHHHHHh----CCCCeEEecCCCccE-EEEEecCCChHHHHHHHHHhc-cCcEEEeecccCCCcEEEEeecCCCCHHHH
Q psy11047 608 QKFEALVL----GDPRFEIPAARHLGM-VVIRLLGENILTEKLLKRLNS-KGRLHCVPASLRIQGLGRAQNFTRTTNDDI 681 (943)
Q Consensus 608 ~~l~~~L~----~~p~~eIl~~~~l~i-V~Fr~~g~n~l~~~Ll~~L~~-~G~~~~s~t~~~g~~~lR~v~~~~tt~edI 681 (943)
+++.+.|+ +. ++++.. +..++ +.+++.+.+ ...+.++|.+ +|. ++.+. +.+++|++++. +++++|
T Consensus 345 ~~l~~~L~~~~~~~-g~~~~~-~~~g~~~~~~~~~~~--~~~~~~~l~~~~gi-~v~~g---~~~~iRis~~~-~~~e~i 415 (430)
T 2x5f_A 345 EVTKEVVYADQYHS-HWQAYD-FNSGYFMAIKVHDVD--PEALRKHLIDKYSI-GVIAL---NATDIRIAFSC-VEKDDI 415 (430)
T ss_dssp HHHHHHHTCGGGTT-TEEECC-CCBSSEEEEEESSSC--HHHHHHHHHHHHCE-ECEEC---SSSEEEEEGGG-SCGGGH
T ss_pred HHHHHHHHhhCCCC-CceeeC-CCceEEEEeCCCCCC--HHHHHHHHHHhCCE-EEecC---CCCeEEEEEec-CCHHHH
Confidence 67777777 43 677764 44554 677776332 4678888887 775 45542 46789997664 588999
Q ss_pred HHHHHHHHHHHHHH
Q psy11047 682 TRDWNEIRNTATEI 695 (943)
Q Consensus 682 d~ll~~I~~~~~~l 695 (943)
+++++.|+++.+++
T Consensus 416 ~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 416 PHVFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999998876543
No 167
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.22 E-value=1e-09 Score=121.84 Aligned_cols=320 Identities=7% Similarity=-0.092 Sum_probs=178.9
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH--HHHHHHHHHHHHhhcccCCCchh-hhcCCceEEEecCCCch
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL--ICLLAGRTEAIRKYQQSHPELEH-AEINSRLVAYCSDQAHS 312 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL--~AL~aAR~~~l~~~~~~~pGl~~-~~i~~~~vV~~S~~aHy 312 (943)
.++.++++++.+.+ ..++|+|+|+++. .++.+... ..||-.. ....+.-.|++.+-+|.
T Consensus 83 lr~~ia~~~~~~~~----------~i~~t~G~~~al~~~~~~~~l~~--------~~~g~~~~~~~~~gd~V~v~~p~y~ 144 (427)
T 3ppl_A 83 IRQIWADLLGVPVE----------QVLAGDASSLNIMFDVISWSYIF--------GNNDSVQPWSKEETVKWICPVPGYD 144 (427)
T ss_dssp HHHHHHHHHTSCGG----------GEEECSSCHHHHHHHHHHHHHHH--------CCTTCSSCGGGSSCCEEEEEESCCH
T ss_pred HHHHHHHHhCCCcc----------eEEEeCCcHHHHHHHHHHHHHhc--------cCCcccccccCCCCCEEEEcCCCcH
Confidence 44455666677654 6899999999984 44333211 0010000 00000234677788999
Q ss_pred HHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEe-cCCCcccccccHH---Hhhhhccccccccc
Q psy11047 313 SVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSG-LALPAFLVVDSYC---CLGTAMIVKGLGFY 388 (943)
Q Consensus 313 Sv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaT-aGTT~tGaIDpL~---eIa~~~~~~d~~~~ 388 (943)
+...++..-+.+++.+|++++| +|+++|+++|+.. .+.+|+++ ...+.+|.+-|.+ +|.+
T Consensus 145 ~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~---------- 208 (427)
T 3ppl_A 145 RHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSA---------- 208 (427)
T ss_dssp HHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH----------
T ss_pred HHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHH----------
Confidence 8888886544588999998777 9999999998421 25566555 6788899997766 6666
Q ss_pred cccccCchHHHH-HHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchh
Q psy11047 389 KMKLQTNFPNFI-LSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS 467 (943)
Q Consensus 389 ~i~L~RrfR~ia-r~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r 467 (943)
+| ++||+ |+++|.+|+.. .|. . .+.... ...
T Consensus 209 ----------~a~~~~~~-------~ii~De~y~~~-~~~--~---------------------------~~~~~~-~~~ 240 (427)
T 3ppl_A 209 ----------METAAPDF-------RVVWDNAYAVH-TLT--D---------------------------EFPEVI-DIV 240 (427)
T ss_dssp ----------CCCSSTTC-------EEEEECTTTTC-BSS--S---------------------------CCCCCC-CHH
T ss_pred ----------HHhhcCCC-------EEEEECCCccc-ccC--C---------------------------CCCCcc-chh
Confidence 88 89999 99999999875 320 0 000000 111
Q ss_pred hhh--cCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-
Q psy11047 468 LRI--QGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI- 542 (943)
Q Consensus 468 ~~l--~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~- 542 (943)
... .+....+-+..++||+++ +|-...+ ..+..+.. +.......+-....+..++....+..
T Consensus 241 ~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~-----~~~~l~~~--------~~~~~~~~~~~~~~~~q~~~~~~l~~~ 307 (427)
T 3ppl_A 241 GLGEAAGNPNRFWAFTSTSKITLAGAGVSFFL-----TSAENRKW--------YTGHAGIRGIGPNKVNQLAHARYFGDA 307 (427)
T ss_dssp HHHHHTTCTTSEEEEEESTTTSCTTSSCEEEE-----CCHHHHHH--------HHHHHHHHCSCCCHHHHHHHHHHHCSH
T ss_pred hhhhccCCCCcEEEEechhhccCcCccEEEEE-----cCHHHHHH--------HHHHhhcccCCCCHHHHHHHHHHHhCh
Confidence 110 122334677788999854 2211110 00000000 00000000001123333333333332
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEE
Q psy11047 543 KGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEI 622 (943)
Q Consensus 543 ~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eI 622 (943)
..+.+++++..+ .++++ ...+.+.+.+.+...+++++
T Consensus 308 ~~~~~~~~~~~~-------------------~~~~~------------------------~~~l~~~L~~~l~~~~~~~~ 344 (427)
T 3ppl_A 308 EGVRAVMRKHAA-------------------SLAPK------------------------FNKVLEILDSRLAEYGVAQW 344 (427)
T ss_dssp HHHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHHHGGGTCCEE
T ss_pred hhHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHhcCCCCceEE
Confidence 234445544211 00000 12344555555555556777
Q ss_pred ecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEee-cc-c-----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 623 PAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVP-AS-L-----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 623 l~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~-t~-~-----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
..+...+.+.+++.+.+ ...+.+.|.++|. ++.+ .. . .+..++|+++... ++++|+++++.|.++..++
T Consensus 345 ~~p~~g~~~~~~~~~~~--~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 345 TVPAGGYFISLDVVPGT--ASRVAELAKEAGI-ALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp CCCSBSSCEEEECSTTC--HHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred eCCCccEEEEEECCcch--HHHHHHHHHHCCC-EEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHH
Confidence 66666777788886542 5678888888875 4544 11 1 2467999976544 8999999999999887765
Q ss_pred HH
Q psy11047 696 LA 697 (943)
Q Consensus 696 l~ 697 (943)
..
T Consensus 421 ~~ 422 (427)
T 3ppl_A 421 AA 422 (427)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 168
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.22 E-value=3.3e-09 Score=118.05 Aligned_cols=146 Identities=12% Similarity=-0.081 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.++-..+.+|+++..|.+..... ...+....++|+|||+++..++.+.. .+| -.|++.+-
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~-~~~~~~~i~~t~G~~~al~~~~~~l~----------~~g---------d~Vlv~~p 140 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYP-PSQGQMDLCVTSGSQQGLCKVFEMII----------NPG---------DNVLLDEP 140 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSC-GGGTCEEEEEESSHHHHHHHHHHHHC----------CTT---------CEEEEESS
T ss_pred HHHHHHHHHHHHHhcCCCCcccc-ccCCcCcEEEeCcHHHHHHHHHHHhC----------CCC---------CEEEEeCC
Confidence 46677788888888888641000 00000258999999999987766531 122 24667788
Q ss_pred CchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhc------cCCCcEEEEE-ecCCCcccccccHH---Hhhhh
Q psy11047 310 AHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKK------KHLIPFFIFS-GLALPAFLVVDSYC---CLGTA 379 (943)
Q Consensus 310 aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~------kG~~P~~VVa-TaGTT~tGaIDpL~---eIa~~ 379 (943)
+|.+...++...+.+++.+|.+++| +|+++|+++++.... .+..+.+|+. ....+.+|.+-|.+ +|.+
T Consensus 141 ~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~- 218 (425)
T 2r2n_A 141 AYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE- 218 (425)
T ss_dssp CCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH-
T ss_pred CcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH-
Confidence 8988888875444578888887665 999999999973210 0112445544 46677889887755 7777
Q ss_pred ccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 380 MIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 380 ~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+.+
T Consensus 219 -------------------~a~~~~~-------~li~De~~~~~ 236 (425)
T 2r2n_A 219 -------------------LARKYDF-------LIIEDDPYYFL 236 (425)
T ss_dssp -------------------HHHHTTC-------EEEEECTTGGG
T ss_pred -------------------HHHHcCC-------EEEEECCcccc
Confidence 9999999 99999999864
No 169
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.20 E-value=1.4e-10 Score=130.72 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
..+....+|..+++++++++|.+.. -++++|||+||..++.+.+ .+| -.|
T Consensus 85 g~~~~~~~e~~a~~~la~~~g~~~~-----------~v~~~sGs~a~~~a~~~~~----------~~G---------d~V 134 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFGAEFA-----------NVQPHSGAQANAAVLHALM----------SPG---------ERL 134 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE-----------ECCCSSHHHHHHHHHHHHC----------CTT---------CEE
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCce-----------EEEeCCHHHHHHHHHHHhc----------CCC---------CEE
Confidence 4455667787777999999998642 3448899999988876542 123 236
Q ss_pred EecCCCchH-HHHHH---HHC-CccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhh
Q psy11047 305 YCSDQAHSS-VEKAG---LIG-LVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGT 378 (943)
Q Consensus 305 ~~S~~aHyS-v~KAa---~LG-~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~ 378 (943)
++++.+|.+ +..+. ..| ...+..++++ +++.+|+++|++++.... |.+++.+...+.++ .++++|++
T Consensus 135 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~--~~l~~i~~ 207 (447)
T 3h7f_A 135 LGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFR-----PKVIIAGWSAYPRV--LDFAAFRS 207 (447)
T ss_dssp EEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSC--CCHHHHHH
T ss_pred EecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCc--cCHHHHHH
Confidence 666667655 21111 122 1244556665 578999999999997642 34555544444333 38999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhc
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVL 421 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~G 421 (943)
+|++||+ ++++|.++.
T Consensus 208 --------------------l~~~~g~-------lli~Dea~~ 223 (447)
T 3h7f_A 208 --------------------IADEVGA-------KLLVDMAHF 223 (447)
T ss_dssp --------------------HHHHHTC-------EEEEECTTT
T ss_pred --------------------HHHHcCC-------EEEEECCch
Confidence 9999999 999999964
No 170
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.20 E-value=3e-09 Score=118.19 Aligned_cols=144 Identities=11% Similarity=-0.034 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.+|++++++.+.+ ..+||+||||||..|+.+++..... +|-. .++.+++....-
T Consensus 72 ~~~~~l~~~la~~~~~~~~----------~v~~~~gg~ea~~~al~~~~~~~~~------~g~~----~~~~vi~~~~~y 131 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPTF----------RFWAVSGGSEATESAVKLARQYHVE------RGEP----GRFKVITRVPSY 131 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTC----------EEEEESSHHHHHHHHHHHHHHHHHH------TTCT----TCCEEEEETTC-
T ss_pred HHHHHHHHHHHHhCCCCCC----------EEEEeCcHHHHHHHHHHHHHHHHHh------cCCC----CCcEEEEEeCCc
Confidence 3445667789999886543 6899999999999999998764322 1100 023344444444
Q ss_pred chHHHHHHHHCCc--------------cEEEEecCCC---CCcCHHHHHHHHHHhhccCCCcEEEEEecCCC-ccccccc
Q psy11047 311 HSSVEKAGLIGLV--------------NMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFIFSGLALP-AFLVVDS 372 (943)
Q Consensus 311 HySv~KAa~LG~~--------------~v~~Vp~D~~---grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT-~tGaIDp 372 (943)
|....-+..++.. .+..++.++. +..|+++|+++|+.... ..+.+|++.-... .+|.+-+
T Consensus 132 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~ 209 (430)
T 3i4j_A 132 HGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAP 209 (430)
T ss_dssp ------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCC
T ss_pred CCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccC
Confidence 5443333333221 4445555443 45688999999975310 1245555555445 6677666
Q ss_pred ----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 ----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 ----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|.++
T Consensus 210 ~~~~l~~l~~--------------------l~~~~~~-------~li~DEv~~~~ 237 (430)
T 3i4j_A 210 APGYYERVRD--------------------ICDEAGI-------IFIADEVMSGM 237 (430)
T ss_dssp CTTHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred CHHHHHHHHH--------------------HHHHcCC-------EEEEechhhCC
Confidence 889999 9999999 99999999876
No 171
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.17 E-value=5.4e-09 Score=116.08 Aligned_cols=138 Identities=9% Similarity=-0.151 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
+..+.++++++.+.+ ..+||+||||||..|+.+++...-.+ + .| ++-+++....-|.+.
T Consensus 90 ~l~~~la~~~~~~~~----------~v~~~~ggtea~~~ai~~~~~~~~~~-g--~~--------~~~vi~~~~~yh~~~ 148 (429)
T 1s0a_A 90 ELCRKLVAMTPQPLE----------CVFLADSGSVAVEVAMKMALQYWQAK-G--EA--------RQRFLTFRNGYHGDT 148 (429)
T ss_dssp HHHHHHHHHSCTTCC----------EEEEESSHHHHHHHHHHHHHHHHHHH-T--CC--------CCEEEEETTCCCCSS
T ss_pred HHHHHHHHhCCCCCC----------EEEEeCCHHHHHHHHHHHHHHHhccc-C--CC--------CCeEEEECCCCCCCc
Confidence 345578888876443 68999999999999998876421100 0 01 223444454667654
Q ss_pred HHHHHH-C------------CccEEEEecCC------CCCcCHHHHHHHHHHhhccCCCcEEEEEecC-CCccccccc--
Q psy11047 315 EKAGLI-G------------LVNMRYIESDD------KLSLRGDKLIEAIERDKKKHLIPFFIFSGLA-LPAFLVVDS-- 372 (943)
Q Consensus 315 ~KAa~L-G------------~~~v~~Vp~D~------~grmD~daLe~aI~~d~~kG~~P~~VVaTaG-TT~tGaIDp-- 372 (943)
.-++.+ | ...+..++++. .+.+|+++|+++|++.. ..+.+|+++-. .+.+|.+-|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~ 225 (429)
T 1s0a_A 149 FGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHP 225 (429)
T ss_dssp HHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCT
T ss_pred hhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCH
Confidence 444432 1 11356666642 24699999999997521 12455555544 466897666
Q ss_pred --HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 --YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 --L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++|+|.+|.++
T Consensus 226 ~~l~~i~~--------------------l~~~~~~-------~li~De~~~~~ 251 (429)
T 1s0a_A 226 EWLKRIRK--------------------ICDREGI-------LLIADEIATGF 251 (429)
T ss_dssp HHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHHHHHH--------------------HHHHcCC-------EEEEeehhhCC
Confidence 899999 9999999 99999999765
No 172
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.17 E-value=1.3e-08 Score=114.35 Aligned_cols=135 Identities=10% Similarity=-0.003 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 232 LEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 232 LE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
...++.+.|++++|.+ ..+||+|||+||..|+.++|.+... ..|+.. ..+-+|+....-|
T Consensus 108 ~~~~l~~~la~~~g~~------------~v~~~~sGseA~~~al~~a~~~~~~-----~~g~~~---gr~~vi~~~~~yh 167 (433)
T 1z7d_A 108 PLGICERYLTNLLGYD------------KVLMMNTGAEANETAYKLCRKWGYE-----VKKIPE---NMAKIVVCKNNFS 167 (433)
T ss_dssp HHHHHHHHHHHHHTCS------------EEEEESSHHHHHHHHHHHHHHHHHH-----TSCCCT---TCCEEEEETTC--
T ss_pred HHHHHHHHHHhhcCCC------------eEEEeCCHHHHHHHHHHHHHHHhhh-----ccCCCC---CCCeEEEEeCCcC
Confidence 3344556777777742 4789999999999999998753211 011100 0133455555666
Q ss_pred hHHHHHHHHCC------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc----cHHH
Q psy11047 312 SSVEKAGLIGL------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD----SYCC 375 (943)
Q Consensus 312 ySv~KAa~LG~------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID----pL~e 375 (943)
.+...++.++. ..+..+|.+ |+++|+++|+.. .+.+|++.--...+|.+- ++++
T Consensus 168 g~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~ 237 (433)
T 1z7d_A 168 GRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDP-----NVCAFIVEPIQGEAGVIVPSDNYLQG 237 (433)
T ss_dssp ------------------------CEEEECTT-----CHHHHHHHHTST-----TEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCCCCCccCCCHHHHHH
Confidence 66555543321 245556543 799999999521 255666554334467654 6999
Q ss_pred hhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 376 LGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 376 Ia~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|.+ +|++||+ ++++|.++.|+
T Consensus 238 l~~--------------------l~~~~g~-------llI~DEv~~g~ 258 (433)
T 1z7d_A 238 VYD--------------------ICKKYNV-------LFVADEVQTGL 258 (433)
T ss_dssp HHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred HHH--------------------HHHHcCC-------EEEEecCccCC
Confidence 999 9999999 99999999765
No 173
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.17 E-value=9.2e-09 Score=118.22 Aligned_cols=152 Identities=13% Similarity=-0.060 Sum_probs=109.5
Q ss_pred ccccCChhHHHHHHHHHHHHHHHhC-CCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcC
Q psy11047 221 FTWASSPACTELEIITMNWLGKMIG-LPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 299 (943)
Q Consensus 221 ~~~~~SPaateLE~~Vi~wLa~LlG-~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~ 299 (943)
..|..+....++...+.+|+++..| ++.. ....++|+|+|+++..++.+.. .+|- .
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~--------~~~i~~t~G~~~ai~~~~~~l~----------~~gd-----~ 179 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPAD--------PDNIYLTTGASDGISTILKILV----------SGGG-----K 179 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCC--------GGGEEEESSHHHHHHHHHHHHC----------CCCG-----G
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCC--------cccEEEcCCHHHHHHHHHHHHc----------CCCC-----C
Confidence 3455556667888899999999884 6532 1368999999999987765421 1220 0
Q ss_pred CceEEEecCCCchHHHHHHHHCCccEEEEecCC--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc---cHH
Q psy11047 300 SRLVAYCSDQAHSSVEKAGLIGLVNMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD---SYC 374 (943)
Q Consensus 300 ~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID---pL~ 374 (943)
++-.|+++.-.|.++..++.+.+..++.+++++ ++.+|+++|+++|+..... ..+.+|+.+...+.+|.+- +++
T Consensus 180 ~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v~s~~~l~ 258 (498)
T 3ihj_A 180 SRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIE 258 (498)
T ss_dssp GSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCcCCHHHHH
Confidence 123577888899998888865445788888875 4589999999999875332 2366777778888899884 467
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|.+ +|++||+ |+++|.+|+.+
T Consensus 259 ~i~~--------------------la~~~~~-------~li~De~y~~~ 280 (498)
T 3ihj_A 259 DVIH--------------------FAWEEKL-------FLLADEVYQDN 280 (498)
T ss_dssp HHHH--------------------HHHHHTC-------EEEEECTTTTC
T ss_pred HHHH--------------------HHHHcCc-------EEEEEcCcccc
Confidence 7887 9999999 99999999876
No 174
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.17 E-value=3.4e-09 Score=113.93 Aligned_cols=278 Identities=10% Similarity=-0.073 Sum_probs=169.1
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
.+.+++++++|.+.+ ..++|+|||+|+..++.+.. | -.|+++.-+|.+.
T Consensus 54 ~lr~~la~~~~~~~~----------~i~~t~g~~~al~~~~~~l~------------g---------d~Vi~~~p~~~~~ 102 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN----------AILVTNGPTAAFYQIAQAFR------------G---------SRSLIAIPSFAEY 102 (350)
T ss_dssp HHHHHHHHHTTCCGG----------GEEEESHHHHHHHHHHHHTT------------T---------CEEEEEESCCHHH
T ss_pred HHHHHHHHHhCcCHH----------HEEEcCCHHHHHHHHHHHHC------------C---------CEEEEeCCCcHHH
Confidence 467788999998654 68999999999987766421 1 1366778899998
Q ss_pred HHHHHHCCccEEEEec-CCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccccccc
Q psy11047 315 EKAGLIGLVNMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQ 393 (943)
Q Consensus 315 ~KAa~LG~~~v~~Vp~-D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i~L~ 393 (943)
..++..-+.+++.++. ++.+.+++ . .+.+|+.+...+.+|.+-|++++.+
T Consensus 103 ~~~~~~~g~~~~~v~~~~~~~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~--------------- 153 (350)
T 3fkd_A 103 EDACRMYEHEVCFYPSNEDIGEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILR--------------- 153 (350)
T ss_dssp HHHHHHTTCEEEEEETTSCGGGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHH---------------
T ss_pred HHHHHHcCCeEEEEecCCccccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHH---------------
Confidence 8887644458899998 66455554 1 2556777788889999999999999
Q ss_pred CchHHHHHHcC-CCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchhhhhcC
Q psy11047 394 TNFPNFILSYF-PKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQG 472 (943)
Q Consensus 394 RrfR~iar~~G-l~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r~~l~G 472 (943)
+++.++ . ++.+|.+|+.+ .+. +. ... ..+.
T Consensus 154 -----l~~~~~~~-------~li~Dea~~~~-~~~-------------------------------~~-~~~---~~~~- 184 (350)
T 3fkd_A 154 -----LLNDHPDT-------TFVLDQSYVSF-TTE-------------------------------EV-IRP---ADIK- 184 (350)
T ss_dssp -----HHHHCTTS-------EEEEECTTTTS-CSS-------------------------------CC-CCG---GGGT-
T ss_pred -----HHHhCCCC-------EEEEECchhhh-ccC-------------------------------cc-hhh---HHhh-
Confidence 888876 6 89999999765 220 00 000 1111
Q ss_pred CCCeeEEEEcCCCccCcc---CcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHHHHHHHHH
Q psy11047 473 LGRAQNFTIVPSSLLRVK---NSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGIKGLQKHI 549 (943)
Q Consensus 473 ie~ADSItiDpHK~L~vr---~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~~Gl~~~I 549 (943)
....+-+..++||+++.. -...+ .++..+..-... ...+ ....+.+++.. +.+
T Consensus 185 ~~~~~i~~~S~sK~~~~~G~r~G~~~-----~~~~~~~~~~~~----~~~~------~~~~~~~~~~~---------~~l 240 (350)
T 3fkd_A 185 GRKNLVMVYSFSHAYGIPGLRIGYIV-----ANKDFMKRVAAF----STPW------AVNALAIEAAK---------FIL 240 (350)
T ss_dssp TCSSEEEEEESHHHHSCGGGCCEEEE-----CCHHHHHHHHTT----CCTT------CSCHHHHHHHH---------HHH
T ss_pred cCCCEEEEecCchhccCcchheEeEE-----eCHHHHHHHHHh----CCCC------CCCHHHHHHHH---------HHH
Confidence 123456777899988722 11111 011111000000 0000 01122222221 222
Q ss_pred HHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEEecCCCcc
Q psy11047 550 REIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLG 629 (943)
Q Consensus 550 ~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eIl~~~~l~ 629 (943)
+.. . .|. +.+++ ..++++++.+.|.+.|++++. ++..+
T Consensus 241 ~~~----~--~~~----------~~~~~-------------------------~~~~~~~l~~~L~~~~~~~~~-~~~~~ 278 (350)
T 3fkd_A 241 IHP----A--QFT----------LPIRK-------------------------WQRNTVDFITALNRLDGVEVH-PSGTT 278 (350)
T ss_dssp HCT----T--TTC----------CCHHH-------------------------HHHHHHHHHHHHHHSTTEEEC-CCSSS
T ss_pred hCH----H--HHH----------HHHHH-------------------------HHHHHHHHHHHHhcCCCcEEC-CCCCc
Confidence 210 0 000 00000 235677788888888999884 56677
Q ss_pred EEEEEecCCChHHHHHHHHHhc-cCcEEEeecc-c--CCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 630 MVVIRLLGENILTEKLLKRLNS-KGRLHCVPAS-L--RIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 630 iV~Fr~~g~n~l~~~Ll~~L~~-~G~~~~s~t~-~--~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
.+.+++++. -..++.++|.+ .|. .+.+.. . .+..++|++++ +.+++++++++|+++..
T Consensus 279 ~~~~~~~~~--~~~~l~~~L~~~~gi-~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 279 FFLLRLKKG--TAAELKKYMLEEYNM-LIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLE 340 (350)
T ss_dssp EEEEEESSS--CHHHHHHHHHHTTCE-ECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCC--CHHHHHHHHHHHCCE-EEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHH
Confidence 788888754 25788888888 775 454432 2 23679999765 78899999999887754
No 175
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.16 E-value=1.8e-09 Score=118.40 Aligned_cols=161 Identities=12% Similarity=0.004 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHhccC-----ccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHH
Q psy11047 206 SLLGDMLSDAINCLG-----FTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRT 280 (943)
Q Consensus 206 silgd~L~~alN~n~-----~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~ 280 (943)
..+.+.+...+.... ..|.......++...+.+|+.+..|++.. ....++|+|||+|+..++.+..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~--------~~~i~~t~G~t~al~~~~~~l~- 119 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIE--------PQNIALTNGSQSAFFYLFNLFA- 119 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCC--------GGGEEEESCHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCC--------cccEEEeCCcHHHHHHHHHHHc-
Confidence 344555554442221 23444555678888888898888876532 1368999999999988877542
Q ss_pred HHHHhhcccCCCchhhhcCCceEEEec-CCCchHHHHHHH-HC----C-ccEEEEecCC-CCCcCHHHHHHHHHHhhccC
Q psy11047 281 EAIRKYQQSHPELEHAEINSRLVAYCS-DQAHSSVEKAGL-IG----L-VNMRYIESDD-KLSLRGDKLIEAIERDKKKH 352 (943)
Q Consensus 281 ~~l~~~~~~~pGl~~~~i~~~~vV~~S-~~aHySv~KAa~-LG----~-~~v~~Vp~D~-~grmD~daLe~aI~~d~~kG 352 (943)
.+|-. + .+-.|+++ .-+|.....++. .+ . ..+..++.+. .+.+|+++|+ +..
T Consensus 120 ---------~~gd~--~--~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~----- 179 (417)
T 3g7q_A 120 ---------GRRAD--G--STKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGE----- 179 (417)
T ss_dssp ---------BC--------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCT-----
T ss_pred ---------CCCcc--C--CcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--ccc-----
Confidence 12200 0 11246666 545555544442 21 1 2344455432 4578888887 322
Q ss_pred CCcEEEEEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 353 LIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 353 ~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+.+|+.+...+.+|.+-| +++|.+ +|++||+ ++++|.+|+..
T Consensus 180 -~~~~v~~~~p~NptG~~~~~~~~~~l~~--------------------~a~~~~~-------~li~De~~~~~ 225 (417)
T 3g7q_A 180 -ETGMICVSRPTNPTGNVITDEELMKLDR--------------------LANQHNI-------PLVIDNAYGVP 225 (417)
T ss_dssp -TEEEEEEESSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------CEEEECTTCTT
T ss_pred -CceEEEECCCCCCCCCccCHHHHHHHHH--------------------HHHHcCC-------EEEEeCCCccc
Confidence 2667777888889999877 777777 9999999 99999999753
No 176
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.16 E-value=1.5e-09 Score=121.58 Aligned_cols=126 Identities=7% Similarity=0.035 Sum_probs=92.2
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceE
Q psy11047 224 ASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV 303 (943)
Q Consensus 224 ~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~v 303 (943)
...|...++|.. |+++.|.+ ..+++++|++|+..+ .+ .+ .+| -.
T Consensus 64 ~~~p~~~~l~~~----la~l~g~~------------~~~~~~sG~~Ai~~~-~~----l~------~~g---------d~ 107 (400)
T 3nmy_A 64 THNPTRFAYERC----VAALEGGT------------RAFAFASGMAATSTV-ME----LL------DAG---------SH 107 (400)
T ss_dssp TCCHHHHHHHHH----HHHHHTCS------------EEEEESSHHHHHHHH-HT----TS------CTT---------CE
T ss_pred CCCHHHHHHHHH----HHHHhCCC------------CEEEecCHHHHHHHH-HH----Hc------CCC---------CE
Confidence 345667777764 67888764 357888889987652 21 11 122 24
Q ss_pred EEecCCCchHHHHHH-HH----CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhh
Q psy11047 304 AYCSDQAHSSVEKAG-LI----GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGT 378 (943)
Q Consensus 304 V~~S~~aHySv~KAa-~L----G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~ 378 (943)
|+++...|.+....+ .+ .+..++.++.+ |+++|+++|+++ +.+|+....++.+|.+.|+++|++
T Consensus 108 Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~ 176 (400)
T 3nmy_A 108 VVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAV 176 (400)
T ss_dssp EEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHH
Confidence 777888998766654 22 23477777764 799999988753 678888888999999999999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+..
T Consensus 177 --------------------la~~~g~-------~livDe~~~~~ 194 (400)
T 3nmy_A 177 --------------------IARKHGL-------LTVVDNTFASP 194 (400)
T ss_dssp --------------------HHHHTTC-------EEEEECTTTHH
T ss_pred --------------------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999743
No 177
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.16 E-value=1.5e-09 Score=118.19 Aligned_cols=163 Identities=6% Similarity=-0.105 Sum_probs=110.5
Q ss_pred HHHHHHHHHH-HHhcc-CccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCC--cEEEcCChHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSD-AINCL-GFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPG--GGVLQTTASESTLICLLAGRT 280 (943)
Q Consensus 205 ~silgd~L~~-alN~n-~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~--~GvfTsGGTeANL~AL~aAR~ 280 (943)
+.+. +.+.. ++... ...|...+...++...+.+|+....+.+-. .. ..++|+|||+|+..++.....
T Consensus 47 ~~v~-~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~--------~~~~~i~~t~g~~~a~~~~~~~~~~ 117 (397)
T 3fsl_A 47 QAVA-EAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK--------QQRVATIQTLGGSGALKVGADFLKR 117 (397)
T ss_dssp HHHH-HHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEESHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc--------ccceEEEEcCCcHHHHHHHHHHHHh
Confidence 4554 44444 55432 233444445566766666666554332101 12 579999999999887543221
Q ss_pred HHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEec--CCCCCcCHHHHHHHHHHhhccCCCcEEE
Q psy11047 281 EAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFI 358 (943)
Q Consensus 281 ~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~--D~~grmD~daLe~aI~~d~~kG~~P~~V 358 (943)
+ .+| -.|+++.-+|.+...++...+.+++.++. ++++.+|+++|++++++.. ..+.++
T Consensus 118 --~------~~g---------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v 177 (397)
T 3fsl_A 118 --Y------FPE---------SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ---AGSIVL 177 (397)
T ss_dssp --H------CTT---------CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC---TTCEEE
T ss_pred --c------CCC---------CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC---CCCEEE
Confidence 1 122 23667788999988887654458888888 5688999999999997531 125677
Q ss_pred EEecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 359 FSGLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 359 VaTaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.+...+.+|.+ +++++|++ +|++||+ ++++|.+|+.+
T Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 218 (397)
T 3fsl_A 178 LHPCCHNPTGADLTNDQWDAVIE--------------------ILKAREL-------IPFLDIAYQGF 218 (397)
T ss_dssp ECSSSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEEESCTTS
T ss_pred EeCCCCCCCCcCCCHHHHHHHHH--------------------HHHhCCE-------EEEEecCchhh
Confidence 777788889988 55668888 9999999 99999999876
No 178
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.15 E-value=2.8e-09 Score=118.90 Aligned_cols=133 Identities=9% Similarity=-0.047 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
.+..++.++|++++|.+ ..+||+|||+||..|+.+++.+...+ + .+| .+-+|+.+..-
T Consensus 99 ~~~~~l~~~la~~~g~~------------~v~~~~ggteA~~~al~~~~~~~~~~-~--~~g-------~~~vi~~~~~y 156 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAE------------RVLFMNSGTEANETAFKLARHYACVR-H--SPF-------KTKIIAFHNAF 156 (420)
T ss_dssp HHHHHHHHHHHHHSSCS------------EEEEESSHHHHHHHHHHHHHHHHHHH-T--CTT-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHhhCCCC------------eEEEeCCHHHHHHHHHHHHHHHhhhc-c--CCC-------CCEEEEEeCCc
Confidence 34445667778888732 47999999999999999887542210 0 011 12355556667
Q ss_pred chHHHHHHHH-CCc-----------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccc----cccHH
Q psy11047 311 HSSVEKAGLI-GLV-----------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLV----VDSYC 374 (943)
Q Consensus 311 HySv~KAa~L-G~~-----------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGa----IDpL~ 374 (943)
|.+...++.+ |.. .+..+|.+ |+++|+++|+++ +.+|+.+-..+..|. .++++
T Consensus 157 h~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~ 225 (420)
T 2pb2_A 157 HGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLK 225 (420)
T ss_dssp CCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHH
T ss_pred CCcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHH
Confidence 7666655543 321 26666653 799999988643 556665543333454 36789
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|.+ +|++||+ ++++|.+|.++
T Consensus 226 ~l~~--------------------l~~~~gi-------~lI~Dev~~g~ 247 (420)
T 2pb2_A 226 GLRD--------------------LCDEHQA-------LLVFDEVQCGM 247 (420)
T ss_dssp HHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred HHHH--------------------HHHHcCC-------EEEEEcCCcCc
Confidence 9999 9999999 99999999765
No 179
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.12 E-value=3.2e-08 Score=112.95 Aligned_cols=143 Identities=15% Similarity=0.016 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.++|+++++.+.+ ..+||+||||||..|+.+||.+...+ + .++ ++-+|.....-
T Consensus 99 ~~~~~lae~l~~~~~~~~~----------~v~~~~sGseA~~~aik~a~~~~~~~-g--~~~-------~~~ii~~~~~y 158 (472)
T 3hmu_A 99 VPAIALAQKLAELAPGDLN----------HVFFAGGGSEANDTNIRMVRTYWQNK-G--QPE-------KTVIISRKNAY 158 (472)
T ss_dssp HHHHHHHHHHHHHSCTTEE----------EEEEESSHHHHHHHHHHHHHHHHHHT-T--CTT-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCCCCC----------EEEEeCCHHHHHHHHHHHHHHHHHhc-C--CCC-------CCEEEEEcCcC
Confidence 3444566677888765432 57999999999999999998753211 0 111 23455556666
Q ss_pred chHHHHHHHHCCc-----------cEEEEecCC-----CCCcC--------HHHHHHHHHHhhccCCCcEEEEEecCCCc
Q psy11047 311 HSSVEKAGLIGLV-----------NMRYIESDD-----KLSLR--------GDKLIEAIERDKKKHLIPFFIFSGLALPA 366 (943)
Q Consensus 311 HySv~KAa~LG~~-----------~v~~Vp~D~-----~grmD--------~daLe~aI~~d~~kG~~P~~VVaTaGTT~ 366 (943)
|-+..-++.++.. .+..++... ++ +| .++|++.|+.... ..+.+|++.--...
T Consensus 159 Hg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~ 235 (472)
T 3hmu_A 159 HGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGA 235 (472)
T ss_dssp CCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBST
T ss_pred CCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCC
Confidence 6554444434321 356666432 22 44 7888888874211 12455555444444
Q ss_pred cccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 367 FLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 367 tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.|.+-| +++|.+ +|++||+ ++.+|-++.|+
T Consensus 236 gG~~~~~~~~l~~l~~--------------------l~~~~gi-------llI~DEv~~gf 269 (472)
T 3hmu_A 236 GGVIVAPDSYWPEIQR--------------------ICDKYDI-------LLIADEVICGF 269 (472)
T ss_dssp TTCBCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCcccCCHHHHHHHHH--------------------HHHHcCC-------EEEEEccccCC
Confidence 567666 899999 9999999 99999999876
No 180
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.12 E-value=9.2e-10 Score=122.97 Aligned_cols=124 Identities=9% Similarity=-0.008 Sum_probs=91.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 226 SPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 226 SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
.|...++|. .+++++|.+. .+++++||+|+..++. . + .+| -.|+
T Consensus 66 ~p~~~~l~~----~la~~~g~~~------------~i~~~sG~~ai~~~~~-l----~------~~g---------d~Vl 109 (403)
T 3cog_A 66 NPTRNCLEK----AVAALDGAKY------------CLAFASGLAATVTITH-L----L------KAG---------DQII 109 (403)
T ss_dssp CHHHHHHHH----HHHHHHTCSE------------EEEESCHHHHHHHHHT-T----S------CTT---------CEEE
T ss_pred CchHHHHHH----HHHHHhCCCc------------EEEECCHHHHHHHHHH-H----h------CCC---------CEEE
Confidence 455566665 5567777652 4666677888866653 1 1 122 2477
Q ss_pred ecCCCchHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcc
Q psy11047 306 CSDQAHSSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMI 381 (943)
Q Consensus 306 ~S~~aHySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~ 381 (943)
+++..|.+..... ...+.+++.++.+ |+++|+++|+++ +.+|+.+..++.+|.+-|+++|++
T Consensus 110 ~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~--- 175 (403)
T 3cog_A 110 CMDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAH--- 175 (403)
T ss_dssp EESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH---
T ss_pred EeCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHH---
Confidence 7888998866644 2223477888875 799999888643 677888889999999999999999
Q ss_pred ccccccccccccCchHHHHHHcC-CCCCccchhhhHHhhhcCC
Q psy11047 382 VKGLGFYKMKLQTNFPNFILSYF-PKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 382 ~~d~~~~~i~L~RrfR~iar~~G-l~~~~l~lwLHVDAA~GG~ 423 (943)
+|+++| + ++++|.+|+.+
T Consensus 176 -----------------la~~~g~~-------~livD~~~~~~ 194 (403)
T 3cog_A 176 -----------------IVHKHGDI-------ILVVDNTFMSP 194 (403)
T ss_dssp -----------------HHTSSSCC-------EEEEECTTTCT
T ss_pred -----------------HHHHcCCC-------EEEEECCCccc
Confidence 999999 9 99999999876
No 181
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.12 E-value=2.4e-09 Score=118.12 Aligned_cols=148 Identities=5% Similarity=-0.136 Sum_probs=102.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|.......++...+.+|+.+..+.+.. ...++|+|||+|+..++.+.. .+| -
T Consensus 76 y~~~~g~~~lr~~ia~~~~~~~~~~~~---------~~i~~t~g~~~al~~~~~~l~----------~~g---------d 127 (418)
T 3rq1_A 76 YAPIAGIPDFLCAAEKECFGNFRPEGH---------IRSIATAGGTGGIHHLIHNYT----------EPG---------D 127 (418)
T ss_dssp CCCTTCCHHHHHHHHHHHHGGGCCSSE---------EEEEEESHHHHHHHHHHHHHS----------CTT---------C
T ss_pred CCCCCChHHHHHHHHHHHhcccCcccc---------ccEEECCchHHHHHHHHHHhc----------CCC---------C
Confidence 333344677888888888776653311 258999999999988876421 122 2
Q ss_pred EEEecCCCchHHHHHHHHCCccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecC-CCcccccccHHHhhhhc
Q psy11047 303 VAYCSDQAHSSVEKAGLIGLVNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLA-LPAFLVVDSYCCLGTAM 380 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~LG~~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaG-TT~tGaIDpL~eIa~~~ 380 (943)
.|++++-+|.+...++...+.+++.+|++ +++.+|+++|+++|++..... ...+++.+.. .+.+|.+-|.+++.+
T Consensus 128 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~-- 204 (418)
T 3rq1_A 128 EVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDS-- 204 (418)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHH--
T ss_pred EEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHH--
Confidence 46777888888888876545588889884 567999999999998632111 1235555545 788999988666554
Q ss_pred cccccccccccccCchHHHHH------HcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFIL------SYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar------~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+..+|+ +||+ |+++|.+|.++
T Consensus 205 ---------------l~~~~~~~~~~~~~~~-------~li~De~y~~~ 231 (418)
T 3rq1_A 205 ---------------ILNFLKDLVAIGRNNV-------IIGIDVAYLDY 231 (418)
T ss_dssp ---------------HHHHHHHHHHTSSCEE-------EEEEECTTGGG
T ss_pred ---------------HHHHHHHhhhccCCCe-------EEEEecccccc
Confidence 111666 8999 99999999765
No 182
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.11 E-value=1.1e-08 Score=113.83 Aligned_cols=135 Identities=7% Similarity=-0.130 Sum_probs=90.5
Q ss_pred HHHHHHHHHHhCCC-ccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 234 IITMNWLGKMIGLP-EEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p-~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
.++.+.+++++|.+ .+ ..+||+||||||..|+.+++.. + ++-+++....-|.
T Consensus 89 ~~l~~~la~~~~~~~~~----------~v~~~~gg~ea~~~ai~~~~~~---------~--------~~~vi~~~p~yh~ 141 (419)
T 2eo5_A 89 LELAKKLVTYSPGNFQK----------KVFFSNSGTEAIEASIKVVKNT---------G--------RKYIIAFLGGFHG 141 (419)
T ss_dssp HHHHHHHHHHSSCSSCE----------EEEEESSHHHHHHHHHHHHHTT---------S--------CCEEEEETTCCCC
T ss_pred HHHHHHHHHhCCCCcCC----------EEEEeCchHHHHHHHHHHHHHh---------h--------CCcEEEECCCcCC
Confidence 34556788999875 32 5899999999999999876521 1 1234555556675
Q ss_pred HHHHHHHH-C------------CccEEEEecCCCCC----------------cCHHHHH-HHHHHhhccCCCcEEEEEec
Q psy11047 313 SVEKAGLI-G------------LVNMRYIESDDKLS----------------LRGDKLI-EAIERDKKKHLIPFFIFSGL 362 (943)
Q Consensus 313 Sv~KAa~L-G------------~~~v~~Vp~D~~gr----------------mD~daLe-~aI~~d~~kG~~P~~VVaTa 362 (943)
+..-++.+ | ...++.+|.++..+ +|+++|+ ++|++.. ....+.+|++.-
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p 220 (419)
T 2eo5_A 142 RTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEP 220 (419)
T ss_dssp SSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECS
T ss_pred CCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeC
Confidence 55554432 1 12578888865543 4788999 8887421 001244555544
Q ss_pred CCCccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 363 ALPAFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 363 GTT~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
....+|.+-| +++|.+ +|++||+ ++|+|.+|.++
T Consensus 221 ~~~~tG~~~~~~~~l~~l~~--------------------l~~~~~~-------~li~DE~~~~~ 258 (419)
T 2eo5_A 221 IQGEGGYVIPPKNFFAELQK--------------------LAKKYGI-------LLVDDEVQMGL 258 (419)
T ss_dssp SBTTTTSBCCCTTHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred ccCCCCCccCCHHHHHHHHH--------------------HHHHcCC-------EEEEeccccCC
Confidence 3344687555 889998 9999999 99999999865
No 183
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.10 E-value=9.8e-09 Score=114.85 Aligned_cols=142 Identities=11% Similarity=-0.071 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCch
Q psy11047 233 EIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHS 312 (943)
Q Consensus 233 E~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHy 312 (943)
..++.+.++++++.+.+ ..+||+|||+||..|+.+++..... .+ .++ ++-+++.+..-|.
T Consensus 95 ~~~l~~~la~~~~~~~~----------~v~~~~ggsea~~~al~~~~~~~~~-~g--~~~-------~~~vi~~~~~yhg 154 (449)
T 3a8u_X 95 SFQLAEKITDLTPGNLN----------HVFFTDSGSECALTAVKMVRAYWRL-KG--QAT-------KTKMIGRARGYHG 154 (449)
T ss_dssp HHHHHHHHHTTSSTTEE----------EEEEESSHHHHHHHHHHHHHHHHHH-TT--CTT-------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHhCCCCCC----------EEEEcCcHHHHHHHHHHHHHHHHHh-cC--CCC-------CCEEEEECCCcCC
Confidence 34556677888765433 5899999999999999988753211 00 011 2345556777776
Q ss_pred HHHHHHHHCC------------ccEEEEecCCCCC-----cC--------HHHHHHHHHHhhccCCCcEEEEEecCCCcc
Q psy11047 313 SVEKAGLIGL------------VNMRYIESDDKLS-----LR--------GDKLIEAIERDKKKHLIPFFIFSGLALPAF 367 (943)
Q Consensus 313 Sv~KAa~LG~------------~~v~~Vp~D~~gr-----mD--------~daLe~aI~~d~~kG~~P~~VVaTaGTT~t 367 (943)
+...++.+.. ..+..++++...+ +| +++|+++|+.... ..+.+|+++-..+.+
T Consensus 155 ~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~t 232 (449)
T 3a8u_X 155 VNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDA--SNIAAVFVEPLAGSA 232 (449)
T ss_dssp SSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTTT
T ss_pred CChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCC
Confidence 6555553321 2456676543222 56 9999999975310 124566655444558
Q ss_pred ccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 368 LVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 368 GaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|.+-| +++|.+ +|++||+ ++++|.++.++
T Consensus 233 G~~~~~~~~l~~l~~--------------------l~~~~~~-------~li~Dev~~~~ 265 (449)
T 3a8u_X 233 GVLVPPEGYLKRNRE--------------------ICNQHNI-------LLVFDEVITGF 265 (449)
T ss_dssp TCBCCCTTHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred CCccCCHHHHHHHHH--------------------HHHHhCC-------EEEEeccccCc
Confidence 98766 999999 9999999 99999999765
No 184
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.09 E-value=4.2e-08 Score=110.70 Aligned_cols=144 Identities=14% Similarity=-0.029 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
+...++.++|+++++.+.+ ..+||+||||||..|+.++|...... + .++ ++.++.....-
T Consensus 95 ~~~~~la~~l~~~~~~~~~----------~v~~~~gGseA~~~al~~~~~~~~~~-g--~~~-------~~~vi~~~~~y 154 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGMS----------RVYFGLSGSDANETNIKLIWYYNNVL-G--RPE-------KKKIISRWRGY 154 (460)
T ss_dssp HHHHHHHHHHHHHSCTTEE----------EEEEESSHHHHHHHHHHHHHHHHHHT-T--CTT-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHhhCCCCcC----------EEEEeCchHHHHHHHHHHHHHHHHhc-C--CCC-------CCEEEEECCCc
Confidence 4455667788888755433 57999999999999999998653210 0 011 23455556666
Q ss_pred chHHHHHHHHCC------------ccEEEEecCC-----CCCcC--------HHHHHHHHHHhhccCCCcEEEEEecCCC
Q psy11047 311 HSSVEKAGLIGL------------VNMRYIESDD-----KLSLR--------GDKLIEAIERDKKKHLIPFFIFSGLALP 365 (943)
Q Consensus 311 HySv~KAa~LG~------------~~v~~Vp~D~-----~grmD--------~daLe~aI~~d~~kG~~P~~VVaTaGTT 365 (943)
|-+..-++.++. ..+..++... +.-++ .++|+++|+.... ..+.+|++.-...
T Consensus 155 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~--~~~aaii~ep~~~ 232 (460)
T 3gju_A 155 HGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGP--ETIAAFIGEPILG 232 (460)
T ss_dssp CCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBS
T ss_pred CCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCC--CCEEEEEECCccC
Confidence 655544443322 1456666432 11233 5888888874211 1245556554444
Q ss_pred ccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 366 AFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 366 ~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
..|.+-| +++|.+ +|++||+ ++++|-+|.++
T Consensus 233 ~~G~~~~~~~~l~~l~~--------------------l~~~~~~-------llI~DEv~~g~ 267 (460)
T 3gju_A 233 TGGIVPPPAGYWEKIQA--------------------VLKKYDV-------LLVADEVVTGF 267 (460)
T ss_dssp TTTSBCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCCCccCCHHHHHHHHH--------------------HHHHcCC-------EEEEeccccCC
Confidence 4566544 888998 9999999 99999999876
No 185
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.09 E-value=3.5e-08 Score=110.62 Aligned_cols=143 Identities=7% Similarity=-0.123 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.+...++.+||+++++.+. . .+||+||||||..|+.++|.+... .|-. .++-++.....
T Consensus 90 ~~~~~~la~~l~~~~~~~~----------~-v~~~~ggseA~~~al~~~~~~~~~------~g~~----~~~~vi~~~~~ 148 (452)
T 3n5m_A 90 HEPAIKLAEKLNEWLGGEY----------V-IFFSNSGSEANETAFKIARQYYAQ------KGEP----HRYKFMSRYRG 148 (452)
T ss_dssp EHHHHHHHHHHHHHHTSCE----------E-EEEESSHHHHHHHHHHHHHHHHHT------TTCT----TCCEEEEETTC
T ss_pred CHHHHHHHHHHHHhCCCCc----------e-EEEeCchHHHHHHHHHHHHHHHHh------cCCC----CCCEEEEECCC
Confidence 4555677889999987643 2 789999999999999998854211 0000 12345555666
Q ss_pred CchHHHHHHHHCC------------ccEEEEecCCCCCc------------CHHHHHHHHHHhhccCCCcEEEEEecC-C
Q psy11047 310 AHSSVEKAGLIGL------------VNMRYIESDDKLSL------------RGDKLIEAIERDKKKHLIPFFIFSGLA-L 364 (943)
Q Consensus 310 aHySv~KAa~LG~------------~~v~~Vp~D~~grm------------D~daLe~aI~~d~~kG~~P~~VVaTaG-T 364 (943)
-|-+..-+..++. ..+..++.....+. +.++|+++|+... ...+.+|++.-. .
T Consensus 149 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~ep~~~ 226 (452)
T 3n5m_A 149 YHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL--SETIAAFIMEPIIT 226 (452)
T ss_dssp CCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC--GGGEEEEEECSSBT
T ss_pred cCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC--CCCEEEEEEccccC
Confidence 6654443333321 13555654222221 2899999997311 112455555544 4
Q ss_pred Cccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+ +|.+-| +++|.+ +|++||+ ++++|-+|.++
T Consensus 227 n-~G~~~~~~~~l~~l~~--------------------l~~~~~~-------llI~DEv~~g~ 261 (452)
T 3n5m_A 227 G-GGILMAPQDYMKAVHE--------------------TCQKHGA-------LLISDEVICGF 261 (452)
T ss_dssp T-TTCBCCCTTHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred C-CCeeeCCHHHHHHHHH--------------------HHHHcCC-------EEEEecchhCC
Confidence 6 887766 899999 9999999 99999998876
No 186
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.09 E-value=7e-09 Score=116.82 Aligned_cols=132 Identities=8% Similarity=-0.077 Sum_probs=87.4
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
++.+++++++|.+ ..+||+|||+||..|+.++|.+... .+|+.. ..+-+|+....-|.+.
T Consensus 122 ~l~~~la~~~g~~------------~v~~~~sGseA~~~al~~~~~~~~~-----~~g~~~---g~~~vi~~~~~yhg~~ 181 (439)
T 2oat_A 122 EYEEYITKLFNYH------------KVLPMNTGVEAGETACKLARKWGYT-----VKGIQK---YKAKIVFAAGNFWGRT 181 (439)
T ss_dssp HHHHHHHHHHTCS------------EEEEESSHHHHHHHHHHHHHHHHHH-----TTCCCT---TCCEEEEETTCCCCSS
T ss_pred HHHHHHHHhcCCC------------EEEEeCCHHHHHHHHHHHHHHHhhh-----ccCCCC---CCCeEEEEcCCCCCCC
Confidence 4455667777732 4789999999999999998753211 112100 0134555566667666
Q ss_pred HHHHHHCC------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc----cHHHhhh
Q psy11047 315 EKAGLIGL------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD----SYCCLGT 378 (943)
Q Consensus 315 ~KAa~LG~------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID----pL~eIa~ 378 (943)
..++.+.. ..+..+|.+ |+++|+++|+.. .+.+|++.-....+|.+- ++++|.+
T Consensus 182 ~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~ 251 (439)
T 2oat_A 182 LSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRE 251 (439)
T ss_dssp HHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred HhHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCCCCCCcCCCHHHHHHHHH
Confidence 65554322 356777753 799999988521 245566554334467654 6999999
Q ss_pred hccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.++.|+
T Consensus 252 --------------------l~~~~gi-------llI~DEv~~g~ 269 (439)
T 2oat_A 252 --------------------LCTRHQV-------LFIADEIQTGL 269 (439)
T ss_dssp --------------------HHHHTTC-------EEEEECTTTTT
T ss_pred --------------------HHHHcCC-------EEEEeccccCC
Confidence 9999999 99999999765
No 187
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.09 E-value=8.1e-09 Score=114.77 Aligned_cols=320 Identities=9% Similarity=-0.080 Sum_probs=171.7
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHH-HHHHHHHHHHHHhhcccCCCchhhhc-C-CceEEEecCCCch
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTL-ICLLAGRTEAIRKYQQSHPELEHAEI-N-SRLVAYCSDQAHS 312 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL-~AL~aAR~~~l~~~~~~~pGl~~~~i-~-~~~vV~~S~~aHy 312 (943)
.++.+++.+|.+.+ ..++|+|+|++++ ..+..+- .+.. .+|-. .+ . ....|++.+-+|.
T Consensus 81 lr~~ia~~~~~~~~----------~i~~t~G~~~al~l~~~~~~l---~~~~---~~g~~--~~~~~d~~~Vl~~~p~y~ 142 (422)
T 3d6k_A 81 IRELWAEALGLPAD----------LVVAQDGSSLNIMFDLISWSY---TWGN---NDSSR--PWSAEEKVKWLCPVPGYD 142 (422)
T ss_dssp HHHHHHHHHTCCGG----------GEEECSSCHHHHHHHHHHHHH---HHCC---TTCSS--CGGGSSCCEEEEEESCCH
T ss_pred HHHHHHHHhCCChh----------HEEEecchHHHHHHHHHHHHh---cCcc---ccccc--ccccCCCCEEEEeCCccH
Confidence 33445556677654 6899999999974 3322221 1100 00100 00 0 0124667777888
Q ss_pred HHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEE-EecCCCcccccccHH---Hhhhhccccccccc
Q psy11047 313 SVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIF-SGLALPAFLVVDSYC---CLGTAMIVKGLGFY 388 (943)
Q Consensus 313 Sv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VV-aTaGTT~tGaIDpL~---eIa~~~~~~d~~~~ 388 (943)
....++..-+.+++.+|.+++| +|+++|+++++.. .+.+|+ .+...+.+|.+-|.+ +|.+
T Consensus 143 ~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~---------- 206 (422)
T 3d6k_A 143 RHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE---------- 206 (422)
T ss_dssp HHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH----------
T ss_pred HHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH----------
Confidence 8888775333478889987776 9999999998642 145555 456677889987766 6666
Q ss_pred cccccCchHHHHH-HcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHHHHHhhccCcccccchh
Q psy11047 389 KMKLQTNFPNFIL-SYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPAS 467 (943)
Q Consensus 389 ~i~L~RrfR~iar-~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kll~~l~~~G~~~~p~~r 467 (943)
+|+ +||+ ++++|.+|+.. .|. . ++.-.. ...
T Consensus 207 ----------~~~~~~~~-------~li~De~y~~~-~~~--~---------------------------~~~~~~-~~~ 238 (422)
T 3d6k_A 207 ----------MSTAAPDF-------RIVWDNAYALH-TLS--D---------------------------EFPIVH-NVI 238 (422)
T ss_dssp ----------CCCSSTTC-------EEEEECTTTTC-BSS--S---------------------------CCCCCC-CHH
T ss_pred ----------HHhhccCC-------EEEEECCcccc-ccC--C---------------------------CCCCCc-Chh
Confidence 787 8999 99999999742 110 0 000000 110
Q ss_pred hhh--cCCCCeeEEEEcCCCccC--ccCcchhhhhcccCccccccCCCCcccccCccccCCCCCcchHHHHHHHHHHHH-
Q psy11047 468 LRI--QGLGRAQNFTIVPSSLLR--VKNSGALHRTFNVEPLYLRHENSGLAIDYMHWQIPLSKRFRALKLWFVIRNFGI- 542 (943)
Q Consensus 468 ~~l--~Gie~ADSItiDpHK~L~--vr~~~~L~~af~~~p~YL~~~~~g~~~d~~~~tie~SRrfrALklW~tLr~~G~- 542 (943)
... .+....+-+..+++|+++ .|-+..+ ..+..+..-.. ......++ ...+..++....+..
T Consensus 239 ~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~-----~~~~l~~~l~~--~~~~~~~~------~~~~~q~a~~~~l~~~ 305 (422)
T 3d6k_A 239 EFAQAAGNPNRFWFMSSTSKITHAGSGVSFFA-----SSKENIEWYAS--HANVRGIG------PNKLNQLAHAQFFGDV 305 (422)
T ss_dssp HHHHHTTCTTCEEEEEESTTTSCTTSSCEEEE-----CCHHHHHHHHH--HHHHHCSC------CCHHHHHHHHHHHCSH
T ss_pred hHhhccCCCCcEEEEcChhhhcCcccceEEEE-----eCHHHHHHHHH--HHHhhcCC------CCHHHHHHHHHHHhCc
Confidence 000 011233567778899844 2221111 00111000000 00000011 112333333333322
Q ss_pred HHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCcHHHHHHHHHHHHHHhCCCCeEE
Q psy11047 543 KGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEI 622 (943)
Q Consensus 543 ~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~~~~~~LA~~l~~~L~~~p~~eI 622 (943)
..+.++++++.+ .++++ ...+.+.+.+.+...+.+++
T Consensus 306 ~~~~~~~~~~~~-------------------~~~~~------------------------~~~l~~~L~~~l~~~~~~~~ 342 (422)
T 3d6k_A 306 AGLKAHMLKHAA-------------------SLAPK------------------------FERVLEILDSRLSEYGVAKW 342 (422)
T ss_dssp HHHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHHHGGGTCEEE
T ss_pred chHHHHHHHHHH-------------------HHHHH------------------------HHHHHHHHHHhcCcCCceEE
Confidence 234445544211 00000 12344455555544555776
Q ss_pred ecCCCccEEEEEecCCChHHHHHHHHHhccCcEEEee-cc-c-----CCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHH
Q psy11047 623 PAARHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVP-AS-L-----RIQGLGRAQNFTRTTNDDITRDWNEIRNTATEI 695 (943)
Q Consensus 623 l~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~-t~-~-----~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~l 695 (943)
..+...+.+.+++.+.+ ...+.+.+.++|. .+.+ .. . .+..++|+++.. +++++++++++.|+++.+++
T Consensus 343 ~~p~~g~~~~~~~~~~~--~~~~~~~l~~~gV-~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 418 (422)
T 3d6k_A 343 TSPTGGYFISVDVVPGT--ASRVVELAKEAGI-ALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMA 418 (422)
T ss_dssp CCCSBSSCEEEEESTTC--HHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCcceEEEEECCCCC--HHHHHHHHHHCCe-EEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHH
Confidence 66556666777886432 4567777888875 4544 21 2 235789997766 89999999999999887665
Q ss_pred HH
Q psy11047 696 LA 697 (943)
Q Consensus 696 l~ 697 (943)
..
T Consensus 419 ~~ 420 (422)
T 3d6k_A 419 AL 420 (422)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 188
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.08 E-value=1.2e-08 Score=113.34 Aligned_cols=137 Identities=11% Similarity=-0.047 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 232 LEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 232 LE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
...++.+.+++++|.+.+ ..+||+|||+||..|+.+++.. . + ++-+++....-|
T Consensus 86 ~~~~l~~~la~~~~~~~~----------~v~~~~gg~ea~~~a~~~~~~~--~-------~-------~~~vi~~~~~yh 139 (433)
T 1zod_A 86 PVVDLATRLANITPPGLD----------RALLLSTGAESNEAAIRMAKLV--T-------G-------KYEIVGFAQSWH 139 (433)
T ss_dssp HHHHHHHHHHHHSCTTCC----------EEEEESCHHHHHHHHHHHHHHH--H-------T-------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHhCCCCcC----------EEEEeCchHHHHHHHHHHHHHh--h-------C-------CCeEEEECCCcC
Confidence 344566678888876433 6899999999999999887642 1 1 123455555666
Q ss_pred hHHHHHHHHC-----------CccEEEEecCCC------------CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccc
Q psy11047 312 SSVEKAGLIG-----------LVNMRYIESDDK------------LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFL 368 (943)
Q Consensus 312 ySv~KAa~LG-----------~~~v~~Vp~D~~------------grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tG 368 (943)
.+..-+..+. ...++.++++.. +.+|+++|++.|+... ...+.+|++.--.+.+|
T Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G 217 (433)
T 1zod_A 140 GMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS--SGNLAAFIAEPILSSGG 217 (433)
T ss_dssp CSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC--CSCEEEEEECSEETTTT
T ss_pred CCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC--CCCeEEEEEccccCCCC
Confidence 5554444221 124666665321 2357999999997531 11244555543334478
Q ss_pred cccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 369 VVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 369 aIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+-| +++|.+ +|++||+ ++++|.+|.++
T Consensus 218 ~~~~~~~~l~~l~~--------------------l~~~~~~-------~li~DEv~~~~ 249 (433)
T 1zod_A 218 IIELPDGYMAALKR--------------------KCEARGM-------LLILDEAQTGV 249 (433)
T ss_dssp CEECCTTHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred cccCCHHHHHHHHH--------------------HHHHhCC-------EEEEeccccCC
Confidence 6544 899999 9999999 99999999865
No 189
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.07 E-value=1.3e-08 Score=114.88 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=47.6
Q ss_pred CCccEEEEEecCCChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHH
Q psy11047 626 RHLGMVVIRLLGENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATE 694 (943)
Q Consensus 626 ~~l~iV~Fr~~g~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ 694 (943)
+..+++.|.+.+. .....+.++|.++|. ++.+. +..++|++++..+++++|+++++.|+++.++
T Consensus 384 ~~g~~~~~~~~~~-~~~~~~~~~l~~~Gv-~v~~~---g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 384 GRGLMCAFSLPTT-ADRDELIRQLWQRAV-IVLPA---GADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EETTEEEEECSSH-HHHHHHHHHHHHTTE-ECEEE---TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccEEEEEEECCh-HHHHHHHHHHHHCCe-EEecC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4566777877532 235678888888775 44442 4579999999999999999999999887654
No 190
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.07 E-value=7.4e-08 Score=108.19 Aligned_cols=143 Identities=8% Similarity=-0.112 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
+...++.+||+++++...+ ..+||+|||+||..|+.++|..... +|.. .++-++.....-
T Consensus 87 ~~~~~la~~l~~~~~~~~~----------~v~~~~sGseA~~~al~~~~~~~~~------~G~~----~~~~vi~~~~~y 146 (448)
T 3dod_A 87 VPATQLAETLIDISPKKLT----------RVFYSDSGAEAMEIALKMAFQYWKN------IGKP----EKQKFIAMKNGY 146 (448)
T ss_dssp HHHHHHHHHHHHHSCTTEE----------EEEEESSHHHHHHHHHHHHHHHHHH------TTCT----TCCEEEEEC---
T ss_pred HHHHHHHHHHHHhCCCCCC----------EEEEeCchHHHHHHHHHHHHHHHHh------hCCC----CCCEEEEECCCC
Confidence 4455677889998865433 5899999999999999999864321 1100 023344444445
Q ss_pred chHHHHHHHHCC------------ccEEEEecCCCCCc-----------CHHHHHHHHHHhhccCCCcEEEEEecCC-Cc
Q psy11047 311 HSSVEKAGLIGL------------VNMRYIESDDKLSL-----------RGDKLIEAIERDKKKHLIPFFIFSGLAL-PA 366 (943)
Q Consensus 311 HySv~KAa~LG~------------~~v~~Vp~D~~grm-----------D~daLe~aI~~d~~kG~~P~~VVaTaGT-T~ 366 (943)
|-+..-+..++. ..+..++.+...+. |+++|++.|+.... .+.+|+..--. ..
T Consensus 147 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---~~a~vi~ep~~~~~ 223 (448)
T 3dod_A 147 HGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHE---EIAALSIESMVQGA 223 (448)
T ss_dssp --------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGG---GEEEEEEESSEEST
T ss_pred CCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCC---CEEEEEEeCcccCC
Confidence 544433332221 13456666554443 58999999973211 24444444333 45
Q ss_pred cccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 367 FLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 367 tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.|.+-| +++|.+ +|++||+ ++++|-++.++
T Consensus 224 ~G~~~~~~~~l~~l~~--------------------l~~~~~~-------~lI~DEv~~g~ 257 (448)
T 3dod_A 224 SGMIVMPEGYLAGVRE--------------------LCTTYDV-------LMIVDEVATGF 257 (448)
T ss_dssp TTCEECCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCeecCCHHHHHHHHH--------------------HHHHhCC-------EEEEeccccCC
Confidence 565544 889998 9999999 99999999875
No 191
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.06 E-value=4.8e-08 Score=110.26 Aligned_cols=144 Identities=15% Similarity=-0.047 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.....++.+||+++++.+.+ ..+||+|||+||..|+.+++...... + .++ ++.++.....
T Consensus 93 ~~~~~~la~~l~~~~~~~~~----------~v~~~~ggseA~~~al~~~~~~~~~~-g--~~~-------~~~vi~~~~~ 152 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD----------RVFYTNSGSESVDTMIRMVRRYWDVQ-G--KPE-------KKTLIGRWNG 152 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC----------EEEEESSHHHHHHHHHHHHHHHHHHT-T--CTT-------CCEEEEETTC
T ss_pred CHHHHHHHHHHHHhCCCCCC----------EEEEeCchHHHHHHHHHHHHHHHHhc-C--CCC-------CCEEEEECCC
Confidence 34455677889999876433 58999999999999999998753211 0 111 2345555666
Q ss_pred CchHHHHHHHHCC------------ccEEEEecCC-----CCCcC--------HHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 310 AHSSVEKAGLIGL------------VNMRYIESDD-----KLSLR--------GDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 310 aHySv~KAa~LG~------------~~v~~Vp~D~-----~grmD--------~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
-|-...-+..++. ..+..++... +. +| +++|++.|..... ..+.+|++.-..
T Consensus 153 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~~vi~ep~~ 229 (459)
T 4a6r_A 153 YHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA--DKVAAFVGEPIQ 229 (459)
T ss_dssp CCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSB
T ss_pred cCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECCcc
Confidence 6654433333321 1345565322 22 55 7888888875211 124555555444
Q ss_pred Cccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
...|.+-| +++|.+ +|++||+ ++++|-+|.++
T Consensus 230 ~~~G~~~~~~~~l~~l~~--------------------l~~~~~~-------llI~DEv~~g~ 265 (459)
T 4a6r_A 230 GAGGVIVPPATYWPEIER--------------------ICRKYDV-------LLVADEVICGF 265 (459)
T ss_dssp TTTTCBCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCCCcccCCHHHHHHHHH--------------------HHHHcCC-------EEEEeccccCC
Confidence 45566665 899999 9999999 99999998876
No 192
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.05 E-value=4.9e-09 Score=116.31 Aligned_cols=135 Identities=10% Similarity=0.030 Sum_probs=89.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|...+...+++..+.+|+.+-++.+.+ ..+||+|+|+++.. +.+ ++ .+| -
T Consensus 94 y~~~~g~~~l~~~ia~~~~~~~~~~~~----------~i~~t~G~~~al~~-l~~----l~------~~g---------d 143 (432)
T 3ei9_A 94 YGAEQGAKPLRAAIAKTFYGGLGIGDD----------DVFVSDGAKCDISR-LQV----MF------GSN---------V 143 (432)
T ss_dssp CCCTTCCHHHHHHHHHHHHTTTTCCGG----------GEEEESCHHHHHHH-HHH----HH------CTT---------C
T ss_pred CCCCCCCHHHHHHHHHHHHccCCCCcc----------eEEECCChHHHHHH-HHH----Hc------CCC---------C
Confidence 333345578888888888865555443 68999999999754 221 11 122 2
Q ss_pred EEEecCCCchHHHHHHH-HCC-----------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 303 VAYCSDQAHSSVEKAGL-IGL-----------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~-LG~-----------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
.|++++-+|.++..++. .|. ..++.++++..+.+..+ |++ . ..+.+|+.+...+.+|.+
T Consensus 144 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~----~----~~~~~v~l~~p~NPtG~~ 214 (432)
T 3ei9_A 144 TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST----V----GRTDIIFFCSPNNPTGAA 214 (432)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG----C----CCCSEEEEESSCTTTCCC
T ss_pred EEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh----C----CCCCEEEEeCCCCCCCCC
Confidence 36778889999888774 553 36788888754333222 221 1 124566666778889987
Q ss_pred cc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 DS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 Dp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
-+ +.+|.+ +|++||+ ++++|.+|+.+
T Consensus 215 ~~~~~l~~l~~--------------------la~~~~~-------~li~Dea~~~~ 243 (432)
T 3ei9_A 215 ATREQLTQLVE--------------------FAKKNGS-------IIVYDSAYAMY 243 (432)
T ss_dssp CCHHHHHHHHH--------------------HHHHHTC-------EEEEECTTGGG
T ss_pred CCHHHHHHHHH--------------------HHHHcCc-------EEEEccchHhh
Confidence 55 666666 8999999 99999999865
No 193
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.05 E-value=8.8e-09 Score=114.86 Aligned_cols=306 Identities=10% Similarity=0.004 Sum_probs=168.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 223 WASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 223 ~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
|...+...+++..+.+|+. .|++.. ....+||+|||+++..+ .+ ++ .+| -
T Consensus 107 y~~~~g~~~lr~~ia~~~~--~g~~~~--------~~~i~~t~G~~~al~~~-~~----l~------~~g---------d 156 (449)
T 3qgu_A 107 YGAEQGQGALREAVASTFY--GHAGRA--------ADEIFISDGSKCDIARI-QM----MF------GSK---------P 156 (449)
T ss_dssp STTTTCCHHHHHHHHHHHH--TTTTCC--------GGGEEEESCHHHHHHHH-HH----HH------CSS---------S
T ss_pred CCCCCCcHHHHHHHHHHHH--cCCCCC--------HHHEEEccCHHHHHHHH-HH----Hh------CCC---------C
Confidence 3333445678777777776 454322 13689999999998654 21 11 122 2
Q ss_pred EEEecCCCchHHHHHHH-HCCc---------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc
Q psy11047 303 VAYCSDQAHSSVEKAGL-IGLV---------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS 372 (943)
Q Consensus 303 vV~~S~~aHySv~KAa~-LG~~---------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp 372 (943)
.|++++-+|.+...++. .|.. +++.++.++.+.++.+ ++ +. ..+.+|+.+...+.+|.+-+
T Consensus 157 ~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~----~~~~~v~l~~p~NPtG~~~~ 227 (449)
T 3qgu_A 157 TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPD-LS----KA----KRTDIIFFCSPNNPTGAAAT 227 (449)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCC-GG----GC----CCCSEEEEESSCTTTCCCCC
T ss_pred EEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCC-hh----Hc----CCCCEEEEeCCCCCCCCcCC
Confidence 36677889999888875 5542 2888998765433322 11 10 12456666677888998855
Q ss_pred ---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHH
Q psy11047 373 ---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTE 449 (943)
Q Consensus 373 ---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~ 449 (943)
+++|++ +|++||+ ++++|.+|+++ .+.
T Consensus 228 ~~~l~~l~~--------------------l~~~~~~-------~li~Dea~~~~-~~~---------------------- 257 (449)
T 3qgu_A 228 RAQLTELVN--------------------FARKNGS-------ILVYDAAYALY-ISN---------------------- 257 (449)
T ss_dssp HHHHHHHHH--------------------HHHHHTC-------EEEEECTTGGG-CCC----------------------
T ss_pred HHHHHHHHH--------------------HHHHCCc-------EEEEEcchHhh-hcC----------------------
Confidence 667777 9999999 99999999875 220
Q ss_pred HHHHHhhccCcccccchhhhhcCCCCeeEEEEcCCCccCccC---cchhhhhcccCccccccCCCCc--ccc-cCccccC
Q psy11047 450 KLLKRLNSKGRLHCVPASLRIQGLGRAQNFTIVPSSLLRVKN---SGALHRTFNVEPLYLRHENSGL--AID-YMHWQIP 523 (943)
Q Consensus 450 kll~~l~~~G~~~~p~~r~~l~Gie~ADSItiDpHK~L~vr~---~~~L~~af~~~p~YL~~~~~g~--~~d-~~~~tie 523 (943)
|... .... .+.+....+-+..+++|+++... ...+ .....+....... ... ....+..
T Consensus 258 ---------~~~~-~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (449)
T 3qgu_A 258 ---------PDCP-KTIY-EIPGADEVAIETCSFSKYAGFTGVRLGWTV-----VPKALKYANGEPVHADWNRVMTTCFN 321 (449)
T ss_dssp ---------TTSC-SSGG-GSTTGGGTEEEEEECSGGGTCTTCCCEEEE-----CCTTCBCTTSCBHHHHHHHHHHHSCC
T ss_pred ---------CCCC-CCHh-hccCCCCcEEEEecchhhcCCccceeEEEe-----cCHHHHhhhhhhHHHHHHHHhhcccC
Confidence 0000 0010 11122345678889999987322 2111 1111111000000 000 0000000
Q ss_pred CCCCcchHHHHHHHHHHH---HHHHHHHHHHHHhcCCCccccccccccccchhhhhcccccccccccCCCcccccccCCc
Q psy11047 524 LSKRFRALKLWFVIRNFG---IKGLQKHIREIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPK 600 (943)
Q Consensus 524 ~SRrfrALklW~tLr~~G---~~Gl~~~I~~~l~~~~~~~~l~~~~~~~~g~~~i~~~~~~~~i~~~~~~~~~~~~~~p~ 600 (943)
....+.+++....+. .+.+.+..++
T Consensus 322 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~------------------------------------------------- 349 (449)
T 3qgu_A 322 ---GASNIVQAGGLACLQPEGLKEMNAMIKF------------------------------------------------- 349 (449)
T ss_dssp ---CCCHHHHHHHHHHTSHHHHHHHHHHHHH-------------------------------------------------
T ss_pred ---CCCHHHHHHHHHHHhhcCHHHHHHHHHH-------------------------------------------------
Confidence 111222333333322 1222222222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEecCCCccEEEEEecCCChHHHHHHHHHhcc-CcEEEeecc---cCCCcEEEEeecCCC
Q psy11047 601 FQSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKLLKRLNSK-GRLHCVPAS---LRIQGLGRAQNFTRT 676 (943)
Q Consensus 601 ~~~~~LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g~n~l~~~Ll~~L~~~-G~~~~s~t~---~~g~~~lR~v~~~~t 676 (943)
..++++++.+.|++. ++++..+.....+.+.+.+.+ ..++.++|.++ |. ++.+.. ..+.+++|+++. .
T Consensus 350 --~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~gI-~v~pg~~f~~~~~~~iRis~~--~ 421 (449)
T 3qgu_A 350 --YKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFPGKP--SWDVFAEILERCNI-VTTPGSGYGPAGEGFVRASAF--G 421 (449)
T ss_dssp --HHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECTTSC--HHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEECC--S
T ss_pred --HHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECCCCC--HHHHHHHHHHHCCE-EEecchHhCCCCCCeEEEEec--C
Confidence 234566777777766 788776656677777776332 46777777765 64 555432 234679999643 3
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy11047 677 TNDDITRDWNEIRNTAT 693 (943)
Q Consensus 677 t~edId~ll~~I~~~~~ 693 (943)
++++|+++++.|+++..
T Consensus 422 ~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 422 SRENILEAVRRFKEAYG 438 (449)
T ss_dssp CHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 89999999998887654
No 194
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.04 E-value=1.9e-09 Score=123.40 Aligned_cols=122 Identities=7% Similarity=-0.034 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 232 LEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 232 LE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
.-..+.+|+++++|.+ ..++++|||+|+..++. .+ .+| -.|++++.+|
T Consensus 134 ~~~~l~~~la~~~g~~------------~~i~~~sGt~al~~~l~-----~~------~~G---------d~Vi~~~~~y 181 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD------------RAFCFTSGMAALSAVTH-----LI------KNG---------EEIVAGDDVY 181 (464)
T ss_dssp HHHHHHHHHHHHHTCS------------EEEEESSHHHHHHHHHT-----TS------CTT---------CEEEEESSCC
T ss_pred HHHHHHHHHHHHhCCC------------eEEEECCHHHHHHHHHH-----Hh------CCC---------CEEEEECCCc
Confidence 3445778999999875 35788999998754432 11 122 2466788889
Q ss_pred hHHHHHH----HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccc
Q psy11047 312 SSVEKAG----LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGF 387 (943)
Q Consensus 312 ySv~KAa----~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~ 387 (943)
.+...+. ...+..++.++.+ |+++|+++|+.+ +.+|+.+..++.+|.+.|+++|++
T Consensus 182 ~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~--------- 241 (464)
T 1ibj_A 182 GGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISE--------- 241 (464)
T ss_dssp HHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHH---------
T ss_pred hhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHH---------
Confidence 8887653 2233477888774 799999988643 678888889999999999999999
Q ss_pred ccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 388 YKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 388 ~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+..
T Consensus 242 -----------la~~~gi-------~livDea~~~g 259 (464)
T 1ibj_A 242 -----------MAHAQGA-------LVLVDNSIMSP 259 (464)
T ss_dssp -----------HHHTTTC-------EEEEECTTTCT
T ss_pred -----------HHHHcCC-------EEEEECCCccc
Confidence 9999999 99999999754
No 195
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.04 E-value=1e-08 Score=113.77 Aligned_cols=163 Identities=9% Similarity=-0.058 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHhc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCC--cEEEcCChHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPG--GGVLQTTASESTLICLLAGRTE 281 (943)
Q Consensus 205 ~silgd~L~~alN~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~--~GvfTsGGTeANL~AL~aAR~~ 281 (943)
+.+. +.+...+.. ....|.......++...+.+|+....+.+-. .. ..++|+|||+|+..++.....
T Consensus 70 ~~v~-~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~--------~~~~~i~~t~G~t~al~~~~~~~~~- 139 (420)
T 4f4e_A 70 RAVR-DAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA--------AGRVVTAQALGGTGALKIGADFLRT- 139 (420)
T ss_dssp HHHH-HHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEEEHHHHHHHHHHHHHHH-
T ss_pred HHHH-HHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc--------cCceEEEECCccHHHHHHHHHHHHH-
Confidence 4444 444444444 2233444444566666666666544332101 12 579999999999887543211
Q ss_pred HHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEec--CCCCCcCHHHHHHHHHHhhccCCCcEEEE
Q psy11047 282 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFIF 359 (943)
Q Consensus 282 ~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~--D~~grmD~daLe~aI~~d~~kG~~P~~VV 359 (943)
+ .+| -.|++++-+|.+...++...+.+++.+|. ++++.+|+++|++.|+... ..+.+++
T Consensus 140 -~------~~g---------d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~ 200 (420)
T 4f4e_A 140 -L------NPK---------AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE---PGTIVVL 200 (420)
T ss_dssp -H------CTT---------CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEE
T ss_pred -h------CCC---------CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC---CCCEEEE
Confidence 1 122 23667788999888877654558888988 4578999999999997431 1257788
Q ss_pred EecCCCccccc---ccHHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 360 SGLALPAFLVV---DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 360 aTaGTT~tGaI---DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+...+.+|.+ +.+++|++ +|++||+ ++++|.+|+++
T Consensus 201 i~~p~NPtG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~y~~~ 240 (420)
T 4f4e_A 201 HACCHNPTGVDLNDAQWAQVVE--------------------VVKARRL-------VPFLDIAYQGF 240 (420)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEEESCTTS
T ss_pred eCCCCCCCCCCCCHHHHHHHHH--------------------HHHHCCc-------EEEEccccccc
Confidence 88888899988 44667777 9999999 99999999876
No 196
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.03 E-value=8.3e-09 Score=113.64 Aligned_cols=184 Identities=11% Similarity=-0.064 Sum_probs=113.7
Q ss_pred CCCCCCCceeEEccCCCChHHHHHHHHHHHHhccCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcC
Q psy11047 186 ITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQT 265 (943)
Q Consensus 186 ~~~~~sPrf~g~~~~~~s~~silgd~L~~alN~n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTs 265 (943)
..+..+..+.+.-.....++.+ .+.+....+.....|...+...++...+.+|+.+..+.... ...++|+
T Consensus 39 ~i~l~~g~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~---------~~i~~t~ 108 (413)
T 3t18_A 39 VINAALGTLLDDKGKIIALPSV-YDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY---------ISAIATP 108 (413)
T ss_dssp CEECCSCCCBCTTSCBCCCHHH-HHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE---------EEEEEES
T ss_pred eEeccccCccCCCCCcCChHHH-HHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc---------CcEEEcC
Confidence 3444444433322222233443 34444432222223433444567777788888776553211 2689999
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEec-CCCCCcCHHHHHHH
Q psy11047 266 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIES-DDKLSLRGDKLIEA 344 (943)
Q Consensus 266 GGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~-D~~grmD~daLe~a 344 (943)
|||+|+..++.+.. .+| -.|++++-+|.+...++...+.+++.+|. ++++.+|+++|+++
T Consensus 109 g~~~al~~~~~~~~----------~~g---------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~ 169 (413)
T 3t18_A 109 GGTGAIRSAIFSYL----------DEG---------DPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEA 169 (413)
T ss_dssp HHHHHHHHHHHHHC----------CSS---------CEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHH
T ss_pred ccHHHHHHHHHHhc----------CCC---------CEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHH
Confidence 99999988776421 122 24667777888888877543447888987 45679999999999
Q ss_pred HHHhhccCCCcEEEEEecC-CCcccccccHHHhhhhccccccccccccccCchHHHHH------HcCCCCCccchhhhHH
Q psy11047 345 IERDKKKHLIPFFIFSGLA-LPAFLVVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFIL------SYFPKFQSVRLAQKFE 417 (943)
Q Consensus 345 I~~d~~kG~~P~~VVaTaG-TT~tGaIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar------~~Gl~~~~l~lwLHVD 417 (943)
|+.....+ ...+++.+.. .+.+|.+-|.+++.+ +..+|+ +||+ ++++|
T Consensus 170 l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~-----------------l~~~~~~~~~~~~~~~-------~li~D 224 (413)
T 3t18_A 170 IDEGIRDS-DRIASLINSPGNNPTGYSLSDEEWDE-----------------VITFLKEKAEDKDKKI-------TLIVD 224 (413)
T ss_dssp HHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHH-----------------HHHHHHHHTTSTTCEE-------EEEEE
T ss_pred HHHHhhcC-CCEEEEEeCCCCCCCCCCCCHHHHHH-----------------HHHHHHHHhhccCCcE-------EEEEe
Confidence 98632111 1225555544 788999988666655 111666 8999 99999
Q ss_pred hhhcCC
Q psy11047 418 ALVLGD 423 (943)
Q Consensus 418 AA~GG~ 423 (943)
.+|+++
T Consensus 225 e~y~~~ 230 (413)
T 3t18_A 225 VAYLEF 230 (413)
T ss_dssp CTTGGG
T ss_pred cccccc
Confidence 999766
No 197
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.02 E-value=6e-09 Score=114.53 Aligned_cols=167 Identities=9% Similarity=-0.043 Sum_probs=106.7
Q ss_pred HHHHHHHHHH-hc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE--cCChHHHHHHHHHHHHHHH
Q psy11047 207 LLGDMLSDAI-NC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL--QTTASESTLICLLAGRTEA 282 (943)
Q Consensus 207 ilgd~L~~al-N~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf--TsGGTeANL~AL~aAR~~~ 282 (943)
.+.+.+...+ +. ....|...+...++...+.+|+....|.+-. ....+| |+|||+|+..++..++.
T Consensus 52 ~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~--------~~~v~~~~t~gg~~a~~~~~~~~~~-- 121 (412)
T 1ajs_A 52 VVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQ--------EKRVGGVQSLGGTGALRIGAEFLAR-- 121 (412)
T ss_dssp HHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEEEHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccC--------CCcEEEEECCCcHHHHHHHHHHHHH--
Confidence 3444455544 21 2223433444566666666666443332101 125788 99999999888654331
Q ss_pred HHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCcc-EEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEE
Q psy11047 283 IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVN-MRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIF 359 (943)
Q Consensus 283 l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~-v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VV 359 (943)
+ .+|.. . .+-.|++..-+|.+...++...+.+ ++.++.+ +++.+|+++|++++... +..+.+++
T Consensus 122 ~------~~g~~---~-~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~ 188 (412)
T 1ajs_A 122 W------YNGTN---N-KDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL 188 (412)
T ss_dssp H------SSSSS---C-CCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred h------CcCcC---C-CCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence 1 12200 0 0023566677888888877543447 8888873 67889999999999753 11256777
Q ss_pred EecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 360 SGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 360 aTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+...+.+|.+-| +++|.+ +|++||+ ++++|.+|.++
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~y~~~ 228 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIAS--------------------VMKRRFL-------FPFFDSAYQGF 228 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEEESCTTT
T ss_pred ECCCCCCCCCCCCHHHHHHHHH--------------------HHHHCCC-------EEEEEcccccc
Confidence 7888888998844 667787 9999999 99999999876
No 198
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.00 E-value=6.1e-09 Score=113.59 Aligned_cols=157 Identities=10% Similarity=0.032 Sum_probs=104.4
Q ss_pred HHHHHHHHHhc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE--cCChHHHHHHHHHHHHHHHHH
Q psy11047 208 LGDMLSDAINC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL--QTTASESTLICLLAGRTEAIR 284 (943)
Q Consensus 208 lgd~L~~alN~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf--TsGGTeANL~AL~aAR~~~l~ 284 (943)
+.+.+...+.. ....|.......++...+.+|+... +.+.+ ..+| |+|||+|+..++.+.+..
T Consensus 49 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~----------~v~~~~~~g~~~a~~~~~~~~~~~--- 114 (394)
T 2ay1_A 49 VHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE----------TTATLATVGGTGALRQALELARMA--- 114 (394)
T ss_dssp HHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG----------GEEEEEEEHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc----------cEEEEecCCchhHHHHHHHHHHhc---
Confidence 44444444432 2223333334466666666665321 22332 5677 999999998887765421
Q ss_pred hhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEEEe
Q psy11047 285 KYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIFSG 361 (943)
Q Consensus 285 ~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VVaT 361 (943)
.+| + .|++..-+|.+...++. .|. +++.++.+ +++.+|+++|+++|+... ..+.+++.+
T Consensus 115 -----~~g--------d-~vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~ 176 (394)
T 2ay1_A 115 -----NPD--------L-RVFVSDPTWPNHVSIMNFMGL-PVQTYRYFDAETRGVDFEGMKADLAAAK---KGDMVLLHG 176 (394)
T ss_dssp -----CTT--------C-CEEEEESCCHHHHHHHHHHTC-CEEEEECEETTTTEECHHHHHHHHHTCC---TTCEEEEES
T ss_pred -----CCC--------C-EEEEcCCCChhHHHHHHHcCC-ceEEEecccccCCccCHHHHHHHHHhCC---CCCEEEEeC
Confidence 122 1 25566778888888775 454 77888875 678899999999997531 124566667
Q ss_pred cCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 362 LALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 362 aGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
...+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 177 ~~~nptG~~~~~~~l~~i~~--------------------~~~~~~~-------~li~De~~~~~ 214 (394)
T 2ay1_A 177 CCHNPTGANLTLDQWAEIAS--------------------ILEKTGA-------LPLIDLAYQGF 214 (394)
T ss_dssp SSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEEECCTTS
T ss_pred CCCCCCCCCCCHHHHHHHHH--------------------HHHHCCC-------EEEEecCcccc
Confidence 88888998865 556777 9999999 99999999876
No 199
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.00 E-value=4.2e-08 Score=110.98 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=57.5
Q ss_pred HHHHHHHHHhCCCCeEEecCCCccEEEEEecC------CChHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHH
Q psy11047 606 LAQKFEALVLGDPRFEIPAARHLGMVVIRLLG------ENILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTND 679 (943)
Q Consensus 606 LA~~l~~~L~~~p~~eIl~~~~l~iV~Fr~~g------~n~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~e 679 (943)
+.+.+.+.+...|.+... +....++.|.+.. .......+.+.+.++|. ++.+... ...++|+..+...+++
T Consensus 357 l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv-~v~~~~~-~~~~iRi~~~~~~t~e 433 (453)
T 4ffc_A 357 VTSRLSALAEEVDIIGEV-RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGV-LILTCGT-FGNVIRLLPPLVIGDD 433 (453)
T ss_dssp HHHHHHHHHHHCSSEEEE-EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTE-ECCEECT-TSCEEEECCCTTCCHH
T ss_pred HHHHHHHHHhhCCCeEEE-EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCC-EEecCCC-CCCEEEEECCCCCCHH
Confidence 444555555556654433 2334566666642 22345678888888885 4444322 2368999888899999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11047 680 DITRDWNEIRNTATEIL 696 (943)
Q Consensus 680 dId~ll~~I~~~~~~ll 696 (943)
+|+++++.|+++..++.
T Consensus 434 ~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 434 LLDEGITALSDIIRAKA 450 (453)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998876653
No 200
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.55 E-value=4.4e-11 Score=131.09 Aligned_cols=136 Identities=7% Similarity=-0.075 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
..+++..+.+|+++.+|++.. ....++|+|||+|+..++.+... +| -.|++..
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~--------~~~v~~~~g~~~a~~~~~~~~~~----------~g---------d~vl~~~ 120 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFD--------KEDIVFVEGVVPAISIAIQAFTK----------EG---------EAVLINS 120 (392)
Confidence 678888888999888885432 13578999999999888765421 12 1356677
Q ss_pred CCchHHHHHHHHCCccEEEEecC-C--CCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccc
Q psy11047 309 QAHSSVEKAGLIGLVNMRYIESD-D--KLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIV 382 (943)
Q Consensus 309 ~aHySv~KAa~LG~~~v~~Vp~D-~--~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~ 382 (943)
-+|.+...++...+.+++.++.+ + ++.+|+++|++.++.. .+.+|+.+...+.+|.+-| +++|.+
T Consensus 121 p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~---- 191 (392)
T 3b1d_A 121 PVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGH---- 191 (392)
Confidence 78888877774333467777774 3 3469999999998732 1445555667777888755 778888
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|.+|+++
T Consensus 192 ----------------~~~~~~~-------~li~De~~~~~ 209 (392)
T 3b1d_A 192 ----------------LCQKHHV-------ILVSDEIHQDL 209 (392)
Confidence 9999999 99999999876
No 201
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.99 E-value=1.2e-08 Score=116.12 Aligned_cols=130 Identities=5% Similarity=-0.010 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE---cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEE
Q psy11047 228 ACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVA 304 (943)
Q Consensus 228 aateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf---TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV 304 (943)
...++|. .+|+++|.+. .++ ++|||+||..++.+. + .|| -.|
T Consensus 74 ~~~~Le~----~lA~l~g~e~------------alv~p~~~sGt~Ai~~al~al----l------~pG---------D~V 118 (427)
T 3i16_A 74 GRDSLDA----VYARVFNTES------------ALVRPHFVNGTHALGAALFGN----L------RPG---------NTM 118 (427)
T ss_dssp HHHHHHH----HHHHHHTCSE------------EEEETTCCSHHHHHHHHHHHH----C------CTT---------CEE
T ss_pred HHHHHHH----HHHHHhCCcc------------eEEeCCCccHHHHHHHHHHHH----h------CCC---------CEE
Confidence 3556664 6799999853 355 899999998776642 1 122 235
Q ss_pred EecC-CCchHHHH-----------HHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEec----CCCccc
Q psy11047 305 YCSD-QAHSSVEK-----------AGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGL----ALPAFL 368 (943)
Q Consensus 305 ~~S~-~aHySv~K-----------Aa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTa----GTT~tG 368 (943)
++++ ..|..... .+...+.+++.++.+++|.+|+++|+++|++.. .+.+|+.+. .++.+|
T Consensus 119 l~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~----~tklV~i~~s~~~p~nptg 194 (427)
T 3i16_A 119 LSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE----SITLVHIQRSTGYGWRRAL 194 (427)
T ss_dssp EESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT----TEEEEEEECSCCSSSSCCC
T ss_pred EEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC----CCEEEEEEcCCCCCCCCcc
Confidence 6665 56654442 222224478899998899999999999998310 256777766 678889
Q ss_pred ccccHHHhhhhccccccccccccccCchHHHHHH--cCCCCCccchhhhHHhhhcCC
Q psy11047 369 VVDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILS--YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 369 aIDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+.|+++|++ +|++ +|+ +++||.+|+.+
T Consensus 195 ~i~dl~~i~~--------------------la~~~~~g~-------~livD~a~~~~ 224 (427)
T 3i16_A 195 LIEDIKSIVD--------------------CVKNIRKDI-------ICFVDNCYGEF 224 (427)
T ss_dssp CHHHHHHHHH--------------------HHHHHCTTS-------EEEEECTTTTT
T ss_pred cHHHHHHHHH--------------------HHHHhCCCC-------EEEEECCCccc
Confidence 9999999999 9999 999 99999999765
No 202
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.98 E-value=2.5e-08 Score=113.68 Aligned_cols=152 Identities=9% Similarity=-0.167 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHh-hc--------------ccCCCch
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRK-YQ--------------QSHPELE 294 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~-~~--------------~~~pGl~ 294 (943)
.+++..+.+.|+++++... ...+||+||||||..|+.+||.+...+ .. ...||-
T Consensus 109 ~~l~~~la~~l~~~~~~~~----------~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~- 177 (472)
T 1ohv_A 109 ENFVEKLRESLLSVAPKGM----------SQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGC- 177 (472)
T ss_dssp TTHHHHHHHTGGGGCCTTC----------CEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTS-
T ss_pred HHHHHHHHHHHHHhCCCCc----------CEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccC-
Confidence 4666666666677663222 257999999999999999998543100 00 000110
Q ss_pred hhhcCCceEEEecCCCchHHHHHHHHCCc-----------cEEEEecC-CCC-------------CcCHHHHHHHHHHhh
Q psy11047 295 HAEINSRLVAYCSDQAHSSVEKAGLIGLV-----------NMRYIESD-DKL-------------SLRGDKLIEAIERDK 349 (943)
Q Consensus 295 ~~~i~~~~vV~~S~~aHySv~KAa~LG~~-----------~v~~Vp~D-~~g-------------rmD~daLe~aI~~d~ 349 (943)
..+-+|.....-|-+..-++.++.. .+..++.. ... ..|+++|+++|+...
T Consensus 178 ----~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 253 (472)
T 1ohv_A 178 ----PDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYR 253 (472)
T ss_dssp ----CCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcC
Confidence 0134555555667655555433221 11122321 111 236889999997632
Q ss_pred ccCCCcEEEEEecCCCccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 350 KKHLIPFFIFSGLALPAFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 350 ~kG~~P~~VVaTaGTT~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
..+..+.+|+.....+++|.+-| +++|.+ +|++||+ ++|+|.+|.|+
T Consensus 254 ~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~--------------------l~~~~g~-------lli~DEv~~g~ 304 (472)
T 1ohv_A 254 KKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRD--------------------ISRKHGC-------AFLVDEVQTGG 304 (472)
T ss_dssp HTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHH--------------------HHHHhCC-------EEEEeCcccCC
Confidence 21113566666555566898766 899999 9999999 99999999865
No 203
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.98 E-value=1.4e-08 Score=111.23 Aligned_cols=148 Identities=9% Similarity=-0.079 Sum_probs=102.0
Q ss_pred cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE--cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcC
Q psy11047 222 TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 299 (943)
Q Consensus 222 ~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf--TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~ 299 (943)
.|.......++-..+.+|+.+..|.+-. ....++ |+|||+|+..++.+.+... .+|
T Consensus 66 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~~i~~v~t~G~~~al~~~~~~l~~~~-------~~g------- 123 (401)
T 7aat_A 66 EYLPIAGLADFTRASAELALGENSEAFK--------SGRYVTVQGISGTGSLRVGANFLQRFF-------KFS------- 123 (401)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEEEHHHHHHHHHHHHHHHHC-------TTC-------
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCccccc--------cCceEEEecCcchHHHHHHHHHHHHhc-------cCC-------
Confidence 3433334455666666666655454211 124556 9999999988876543210 122
Q ss_pred CceEEEecCCCchHHHHHHHHCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc---ccHH
Q psy11047 300 SRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV---DSYC 374 (943)
Q Consensus 300 ~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI---DpL~ 374 (943)
-.|++++-+|.+...++...+.+++.+|.+ +++.+|++++++.++.. . ..+.+++.+...+.+|.+ ++++
T Consensus 124 --d~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~--~~~~~v~i~~p~NPtG~~~~~~~l~ 198 (401)
T 7aat_A 124 --RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI-P--EKSIILLHACAHNPTGVDPRQEQWK 198 (401)
T ss_dssp --CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS-C--TTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred --CEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC-C--CCcEEEEeCCCCCCCCCCCCHHHHH
Confidence 246677778888877775434478888874 47899999999988762 1 136778888888889966 4577
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|++||+ ++++|.+|+.+
T Consensus 199 ~i~~--------------------~~~~~~~-------~li~Deay~~~ 220 (401)
T 7aat_A 199 ELAS--------------------VVKKRNL-------LAYFDMAYQGF 220 (401)
T ss_dssp HHHH--------------------HHHHTTC-------EEEEEESCTTT
T ss_pred HHHH--------------------HHHhCCc-------EEEEccccccc
Confidence 8888 9999999 99999999876
No 204
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.98 E-value=1.4e-07 Score=107.77 Aligned_cols=145 Identities=10% Similarity=-0.103 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.+...++.+||+++++.+.+ ..+||+||||||..|+.++|..... +|-+ ..+-+|.....
T Consensus 96 ~~~~~~la~~l~~~~~~~~~----------~v~~~~sGseA~~~Aik~a~~~~~~------~g~~----~~~~vi~~~~~ 155 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLN----------RIFFTTGGSTAVDSALRFSEFYNNV------LGRP----QKKRIIVRYDG 155 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCC----------EEEEESSHHHHHHHHHHHHHHHHHH------TTCT----TCCEEEEETTC
T ss_pred CHHHHHHHHHHHhcCCCCcC----------EEEEeCchHHHHHHHHHHHHHHHHh------cCCC----CCCEEEEEcCC
Confidence 44555677899998865432 5899999999999999999875422 1210 12345556666
Q ss_pred CchHHHHHHHHCC------------ccEEEEecCCC--C-CcC--------HHHHHHHHHHhhccCCCcEEEEEecCCCc
Q psy11047 310 AHSSVEKAGLIGL------------VNMRYIESDDK--L-SLR--------GDKLIEAIERDKKKHLIPFFIFSGLALPA 366 (943)
Q Consensus 310 aHySv~KAa~LG~------------~~v~~Vp~D~~--g-rmD--------~daLe~aI~~d~~kG~~P~~VVaTaGTT~ 366 (943)
-|-+..-++.++. ..+..++.... . ..+ .++|++.|+.... ..+.+|++.-....
T Consensus 156 yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~ep~~~~ 233 (476)
T 3i5t_A 156 YHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP--DTIAAFLAEPILAS 233 (476)
T ss_dssp CCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTT
T ss_pred cCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC--CCEEEEEECCccCC
Confidence 6765544443322 13455553221 1 122 7888888875211 12455555544444
Q ss_pred cccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 367 FLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 367 tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.|.+-| |++|.+ +|++||+ ++++|-++.|+
T Consensus 234 ~G~~~~~~~~L~~l~~--------------------lc~~~gi-------llI~DEv~~g~ 267 (476)
T 3i5t_A 234 GGVIIPPAGYHARFKA--------------------ICEKHDI-------LYISDEVVTGF 267 (476)
T ss_dssp TTSBCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCcccCCHHHHHHHHH--------------------HHHHcCC-------EEEEEecccCC
Confidence 565444 889998 9999999 99999999876
No 205
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.96 E-value=1.7e-07 Score=105.87 Aligned_cols=140 Identities=9% Similarity=-0.036 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
+...++.++|+++++.+.. ...+||+||||||..|+.+||.+. | .+.++.....-
T Consensus 104 ~~~~~la~~l~~~~~~~~~---------~~v~~~~sGseA~~~Alk~a~~~~---------g-------~~~ii~~~~~y 158 (451)
T 3oks_A 104 EGYVAVCEQLNRLTPVRGD---------KRSALFNSGSEAVENAVKIARSHT---------H-------KPAVVAFDHAY 158 (451)
T ss_dssp HHHHHHHHHHHHHSSCCSS---------EEEEEESSHHHHHHHHHHHHHHHH---------C-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCcCCC---------CEEEEeCcHHHHHHHHHHHHHHhc---------C-------CCeEEEEcCCc
Confidence 4455677888998864321 258999999999999999987531 1 22345555666
Q ss_pred chHHHHHHHHCC-------------ccEEEEecCCCC-------------CcCHHHHHHHHHHhhccCCCcEEEEEecCC
Q psy11047 311 HSSVEKAGLIGL-------------VNMRYIESDDKL-------------SLRGDKLIEAIERDKKKHLIPFFIFSGLAL 364 (943)
Q Consensus 311 HySv~KAa~LG~-------------~~v~~Vp~D~~g-------------rmD~daLe~aI~~d~~kG~~P~~VVaTaGT 364 (943)
|-...-++.++. ..+..+|..... .-+.+.+++.|+..... ..+.+|+..-..
T Consensus 159 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-~~~aavi~ep~~ 237 (451)
T 3oks_A 159 HGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGA-DNLAAVVIEPIQ 237 (451)
T ss_dssp CCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCG-GGEEEEEECSSB
T ss_pred CCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCC-CCEEEEEEcCCc
Confidence 654444443321 156777764211 12355555666543211 124455554444
Q ss_pred Cccccccc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 365 PAFLVVDS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 365 T~tGaIDp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
...|.+-| +++|.+ +|++||+ ++++|-+|.++
T Consensus 238 ~~gG~~~~~~~~l~~l~~--------------------l~~~~g~-------~lI~DEv~~g~ 273 (451)
T 3oks_A 238 GEGGFIVPADGFLPTLLD--------------------WCRKNDV-------VFIADEVQTGF 273 (451)
T ss_dssp TTTTCBCCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CCCCccCCCHHHHHHHHH--------------------HHHHcCC-------EEEEEecccCC
Confidence 44566655 899999 9999999 99999999876
No 206
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.96 E-value=1.4e-08 Score=112.74 Aligned_cols=132 Identities=8% Similarity=-0.059 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.....++.++++++++ +. ...+||+|||+||..|+..||... + ++-+|.....
T Consensus 91 ~~~~~~la~~l~~~~~-~~----------~~v~~~~ggsea~~~al~~a~~~~---------~-------~~~vi~~~~~ 143 (427)
T 3fq8_A 91 CALENVLAEMVNDAVP-SI----------EMVRFVNSGTEACMAVLRIMRAYT---------G-------RDKIIKFEGC 143 (427)
T ss_dssp CHHHHHHHHHHHHHST-TC----------SEEEEESSHHHHHHHHHHHHHHHH---------C-------CCEEEEEETC
T ss_pred CHHHHHHHHHHHHhCC-CC----------CEEEEeCCHHHHHHHHHHHHHHhh---------C-------CCEEEEECCC
Confidence 3455567788899887 22 268999999999999998887431 1 1223444444
Q ss_pred CchHHHHHHHHCC-------------------ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 310 AHSSVEKAGLIGL-------------------VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 310 aHySv~KAa~LG~-------------------~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
-|.+..-+..++. ..+..++.+ |+++|++.|++.. ..+.+|++.-....+|.+
T Consensus 144 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~ 215 (427)
T 3fq8_A 144 YHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENP---GEIAGVILEPIVGNSGFI 215 (427)
T ss_dssp CCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHST---TTEEEEEECSSBCTTSCB
T ss_pred cCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCc
Confidence 4432222211110 124445543 7999999998632 125667766666667888
Q ss_pred cc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 DS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 Dp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 216 ~~~~~~l~~l~~--------------------l~~~~~~-------~li~DEv~~g~ 245 (427)
T 3fq8_A 216 VPDAGFLEGLRE--------------------ITLEHDA-------LLVFDEVITGF 245 (427)
T ss_dssp CCCTTHHHHHHH--------------------HHHHTTC-------EEEEECTTTBT
T ss_pred CCCHHHHHHHHH--------------------HHHHcCC-------EEEEecccccc
Confidence 88 999999 9999999 99999999866
No 207
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.95 E-value=1.1e-08 Score=123.35 Aligned_cols=127 Identities=6% Similarity=0.050 Sum_probs=92.8
Q ss_pred HHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHH
Q psy11047 236 TMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVE 315 (943)
Q Consensus 236 Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~ 315 (943)
+.+.+|+++|.+.. -++++|+|.||+.++.+.- .|| -.|+++..+|.|+.
T Consensus 200 aE~~lA~~fGa~~a-----------~~v~nGts~An~~ai~al~----------~pG---------D~VLv~r~~H~S~~ 249 (715)
T 3n75_A 200 AEQYIARVFNADRS-----------YMVTNGTSTANKIVGMYSA----------PAG---------STILIDRNCHKSLT 249 (715)
T ss_dssp HHHHHHHHHTCSEE-----------EEESSHHHHHHHHHHHHHC----------CTT---------CEEEEESSCCHHHH
T ss_pred HHHHHHHHhCCCCc-----------eEECcHHHHHHHHHHHHhC----------CCC---------CEEEECCCccHHHH
Confidence 33467899998653 3556666899977766421 122 35788999999999
Q ss_pred HHHHHCCccEEEEecCCC-C----Cc-----CHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccc
Q psy11047 316 KAGLIGLVNMRYIESDDK-L----SL-----RGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGL 385 (943)
Q Consensus 316 KAa~LG~~~v~~Vp~D~~-g----rm-----D~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~ 385 (943)
.++.+.+..++.++++.+ + .+ |+++|+++|++.... ..|.+++.|.+ |.+|.+-|+++|++
T Consensus 250 ~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~-k~p~~vivt~p-n~~G~v~dl~~I~e------- 320 (715)
T 3n75_A 250 HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYNTDFIKK------- 320 (715)
T ss_dssp HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC-CSCSEEEEESS-CTTSEEECHHHHHH-------
T ss_pred HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCc-cCceEEEEECC-CCCCccCCHHHHHH-------
Confidence 998776667888876422 2 24 899999999875321 12557788888 88999999999999
Q ss_pred ccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 386 GFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 386 ~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+.+ +++||.||++.
T Consensus 321 -------------la~~~---------~livDEAH~~~ 336 (715)
T 3n75_A 321 -------------TLDVK---------SIHFDSAWVPY 336 (715)
T ss_dssp -------------HCCCS---------EEEEECTTCTT
T ss_pred -------------HhCcC---------cEEEccccccc
Confidence 88643 47999999976
No 208
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.95 E-value=3.2e-08 Score=112.38 Aligned_cols=143 Identities=11% Similarity=-0.065 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.++|+++++.+.+ ..+||+||||||..|+.++|.+...+ ..+| .+.+|.....-
T Consensus 118 ~~~~~L~e~la~~~~~~~~----------~v~~~~sGseA~~~Alk~a~~~~~~~---g~~g-------~~~ii~~~~~y 177 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD----------TVFFSDSGSVSVEVAAKMALQYWRGR---GLPG-------KRRLMTWRGGY 177 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE----------EEEEESSHHHHHHHHHHHHHHHHHHT---TCTT-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCCCcC----------EEEEeCcHHHHHHHHHHHHHHHHHhc---CCCC-------CceEEEEcCCc
Confidence 3344567788899875443 58999999999999999998754221 0111 22345555555
Q ss_pred chHHHHHHHHC-------------CccEEEEec--CCCCCcCHHHHHHHHHHhhccCCCcEEEEEec-CCCccccccc--
Q psy11047 311 HSSVEKAGLIG-------------LVNMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGL-ALPAFLVVDS-- 372 (943)
Q Consensus 311 HySv~KAa~LG-------------~~~v~~Vp~--D~~grmD~daLe~aI~~d~~kG~~P~~VVaTa-GTT~tGaIDp-- 372 (943)
|-+..-++.++ ...+..++. +..+..|+++|+++|++... .+.+|+..- -...+|.+-|
T Consensus 178 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~---~~aavi~ep~~~~~~G~~~~~~ 254 (457)
T 3tfu_A 178 HGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG---ELAAVVVEPVVQGAGGMRFHDP 254 (457)
T ss_dssp CCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG---GEEEEEECSSEECTTTCEECCT
T ss_pred CCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC---CEEEEEEeCCCcCCCCcccCCH
Confidence 54433333221 112333443 23334689999999985321 245555554 4456676654
Q ss_pred --HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 --YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 --L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.++.|+
T Consensus 255 ~~l~~l~~--------------------l~~~~gi-------llI~DEv~~g~ 280 (457)
T 3tfu_A 255 RYLHDLRD--------------------ICRRYEV-------LLIFDEIATGF 280 (457)
T ss_dssp HHHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHHHHHH--------------------HHHHcCC-------EEEEEcCccCC
Confidence 889998 9999999 99999999876
No 209
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.94 E-value=7e-09 Score=114.18 Aligned_cols=161 Identities=9% Similarity=-0.027 Sum_probs=105.5
Q ss_pred HHHHHHH-HHhc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE--cCChHHHHHHHHHHHHHHHH
Q psy11047 208 LGDMLSD-AINC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL--QTTASESTLICLLAGRTEAI 283 (943)
Q Consensus 208 lgd~L~~-alN~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf--TsGGTeANL~AL~aAR~~~l 283 (943)
+.+.+.. .+.. ....|...+...++...+.+|+.+..|.+-. ....++ |+|||+|+..++...+. +
T Consensus 52 v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~~i~~~~t~g~~~a~~~~~~~~~~--~ 121 (412)
T 1yaa_A 52 VKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQ--------EDRVISVQSLSGTGALHISAKFFSK--F 121 (412)
T ss_dssp HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEEEHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCC--------cceEEEEeccchHhHHHHHHHHHHH--h
Confidence 4444444 4432 1223333344566777777776554443211 125788 99999999877544331 1
Q ss_pred HhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEec-C-CCCCcCHHHHHHHHHHhhccCCCcEEEEEe
Q psy11047 284 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFIFSG 361 (943)
Q Consensus 284 ~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~-D-~~grmD~daLe~aI~~d~~kG~~P~~VVaT 361 (943)
.+| -.|+++.-+|.+...++...+.+++.++. + +++.+|+++|+++|+... ....+++.+
T Consensus 122 ------~~g---------d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~ 183 (412)
T 1yaa_A 122 ------FPD---------KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHS 183 (412)
T ss_dssp ------CTT---------CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEEC
T ss_pred ------CCC---------CEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC---CCCEEEEeC
Confidence 122 12566677888888877543457888887 4 378899999999997531 113555557
Q ss_pred cCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 362 LALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 362 aGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
...+.+|.+-+ +++|.+ +|++||+ ++++|.+|+++
T Consensus 184 ~p~nPtG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 221 (412)
T 1yaa_A 184 CAHNPTGLDPTSEQWVQIVD--------------------AIASKNH-------IALFDTAYQGF 221 (412)
T ss_dssp SSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEEEEESCTTT
T ss_pred CCCCCCCCCCCHHHHHHHHH--------------------HHHHCCC-------EEEEecccccc
Confidence 88888998855 566777 9999999 99999999766
No 210
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.93 E-value=9.3e-08 Score=106.31 Aligned_cols=128 Identities=8% Similarity=0.025 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchH
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSS 313 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHyS 313 (943)
.+..++++++++ +. ...+||+||||||..|+.++|... + ++-++.....-|.+
T Consensus 98 ~~l~~~la~~~~-~~----------~~v~~~~sGsea~~~ai~~a~~~~---------~-------~~~vi~~~~~yhg~ 150 (434)
T 3l44_A 98 VKFAKMLKEAMP-AL----------DKVRFVNSGTEAVMTTIRVARAYT---------G-------RTKIMKFAGCYHGH 150 (434)
T ss_dssp HHHHHHHHHHCT-TC----------SEEEEESSHHHHHHHHHHHHHHHH---------C-------CCEEEEETTCCCCS
T ss_pred HHHHHHHHHhCC-CC----------CEEEEeCchHHHHHHHHHHHHHhh---------C-------CCEEEEEcCccCCC
Confidence 345567778775 22 258999999999999999887531 1 12344444444543
Q ss_pred HHHHHHHCCc-------------------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc--
Q psy11047 314 VEKAGLIGLV-------------------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS-- 372 (943)
Q Consensus 314 v~KAa~LG~~-------------------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp-- 372 (943)
...+..++.. .+..+|.+ |+++|+++|+.... .+.+|++.-....+|.+-|
T Consensus 151 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~ 222 (434)
T 3l44_A 151 SDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKP 222 (434)
T ss_dssp SGGGGBC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCT
T ss_pred cHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCH
Confidence 3322211111 33344432 79999999986321 2455666555555677776
Q ss_pred --HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 --YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 --L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|.++
T Consensus 223 ~~l~~l~~--------------------l~~~~~i-------llI~DEv~~g~ 248 (434)
T 3l44_A 223 GFLEKVNE--------------------LVHEAGA-------LVIYDEVITAF 248 (434)
T ss_dssp THHHHHHH--------------------HHHTTTC-------EEEEECTTTTT
T ss_pred HHHHHHHH--------------------HHHHcCC-------EEEEeccccce
Confidence 999999 9999999 99999999876
No 211
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.92 E-value=1.4e-07 Score=104.90 Aligned_cols=131 Identities=9% Similarity=0.003 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCC
Q psy11047 231 ELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 310 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~a 310 (943)
....++.++++++++ .. ...+||+||||||..|+.+||... + ++.+|.....-
T Consensus 93 ~~~~~la~~l~~~~~-~~----------~~v~~~~sGsea~~~al~~a~~~~---------~-------~~~ii~~~~~y 145 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TM----------DMVRMVNSGTEATMSAIRLARGYT---------G-------RDKIIKFEGCY 145 (429)
T ss_dssp HHHHHHHHHHHHHST-TC----------SEEEEESSHHHHHHHHHHHHHHHH---------C-------CCEEEEETTCC
T ss_pred HHHHHHHHHHHhhCC-CC----------CEEEEeCcHHHHHHHHHHHHHHhh---------C-------CCEEEEEcCcc
Confidence 344456677888886 22 258999999999999999887431 1 22345555556
Q ss_pred chHHHHHHH-HCCc------------------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccc
Q psy11047 311 HSSVEKAGL-IGLV------------------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVD 371 (943)
Q Consensus 311 HySv~KAa~-LG~~------------------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaID 371 (943)
|-+...++. .|.. .+..++.+ |+++|+++|++.. ..+.+|++.-.....|.+.
T Consensus 146 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~g~~~ 217 (429)
T 4e77_A 146 HGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQYP---QEVACIIVEPVAGNMNCIP 217 (429)
T ss_dssp CC------------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBC
T ss_pred CCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhcC---CCEEEEEECCccCCCCCcC
Confidence 655443221 1110 22333322 7999999998632 1245555554445567777
Q ss_pred c----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 372 S----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 372 p----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
| +++|.+ +|++||+ ++++|.+|+++
T Consensus 218 ~~~~~l~~l~~--------------------l~~~~~~-------lli~DEv~~g~ 246 (429)
T 4e77_A 218 PLPEFLPGLRA--------------------LCDEFGA-------LLIIDEVMTGF 246 (429)
T ss_dssp CCTTHHHHHHH--------------------HHHHHTC-------EEEEEETTTBT
T ss_pred CCHHHHHHHHH--------------------HHHHcCC-------EEEEeccccCc
Confidence 7 999999 9999999 99999999876
No 212
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=98.90 E-value=3.6e-08 Score=111.26 Aligned_cols=127 Identities=7% Similarity=-0.064 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE---cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf---TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
..++|+ .+|+++|.+. .++ ++|||+||..++.+. + .|| -.|+
T Consensus 61 ~~~Le~----~lA~l~g~e~------------alv~p~~~sGt~Ai~~al~al----l------~~G---------D~Vl 105 (409)
T 3jzl_A 61 RDTLER----VYATVFKTEA------------ALVRPQIISGTHAISTVLFGI----L------RPD---------DELL 105 (409)
T ss_dssp HHHHHH----HHHHHHTCSE------------EEEETTSCSHHHHHHHHHHHH----C------CTT---------CEEE
T ss_pred HHHHHH----HHHHHhCCCc------------EEEECCCccHHHHHHHHHHHh----c------CCC---------CEEE
Confidence 455654 5789999753 355 899999998877642 1 122 2356
Q ss_pred ecC-CCchHHHHHH----------HHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEec----CCCccccc
Q psy11047 306 CSD-QAHSSVEKAG----------LIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGL----ALPAFLVV 370 (943)
Q Consensus 306 ~S~-~aHySv~KAa----------~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTa----GTT~tGaI 370 (943)
+++ ..|....... ...+..++.++.+++|.+|+++|+++|+.+ +.+|+... .++.+|.+
T Consensus 106 ~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v 179 (409)
T 3jzl_A 106 YITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTI 179 (409)
T ss_dssp ECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCH
T ss_pred EeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCcc
Confidence 665 6666655422 222347889999889999999999998653 56777776 77889999
Q ss_pred ccHHHhhhhccccccccccccccCchHHHHHH--cCCCCCccchhhhHHhhhcCC
Q psy11047 371 DSYCCLGTAMIVKGLGFYKMKLQTNFPNFILS--YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 DpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.|+++|++ +|++ ||+ ++|+|.+|+.+
T Consensus 180 ~~l~~I~~--------------------la~~~~~~~-------~livD~a~~~~ 207 (409)
T 3jzl_A 180 EKIKEMIV--------------------FVKNINPEV-------IVFVDNCYGEF 207 (409)
T ss_dssp HHHHHHHH--------------------HHHHHCTTC-------EEEEECTTCTT
T ss_pred ccHHHHHH--------------------HHHhhCCCC-------EEEEeCCcccc
Confidence 99999999 9999 999 99999999865
No 213
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.88 E-value=2.1e-08 Score=109.17 Aligned_cols=163 Identities=9% Similarity=-0.045 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhc-cCccccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE--cCChHHHHHHHHHHHHHH
Q psy11047 205 PSLLGDMLSDAINC-LGFTWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL--QTTASESTLICLLAGRTE 281 (943)
Q Consensus 205 ~silgd~L~~alN~-n~~~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf--TsGGTeANL~AL~aAR~~ 281 (943)
+.+. +.+...+.. ....|...+...++...+.+|+.+.-+.+-. ....++ |+|||+|+..++.+.+..
T Consensus 47 ~~v~-~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~--------~~~v~~~~~~g~~~a~~~~~~~~~~~ 117 (396)
T 2q7w_A 47 TSVK-KAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIN--------DKRARTAQTPGGTGALRVAADFLAKN 117 (396)
T ss_dssp HHHH-HHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--------TTCEEEEEESHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccc--------cccEEEEecccchhhHHHHHHHHHHh
Confidence 4443 444444332 2223433444566666666665432221100 024666 999999998887654321
Q ss_pred HHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC--CCCCcCHHHHHHHHHHhhccCCCcEEEE
Q psy11047 282 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFIF 359 (943)
Q Consensus 282 ~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D--~~grmD~daLe~aI~~d~~kG~~P~~VV 359 (943)
.+| -.|++.+-+|.+...++...+.+++.++.+ +++.+|+++|+++++... ..+.+++
T Consensus 118 --------~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~ 177 (396)
T 2q7w_A 118 --------TSV---------KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ---AGDVVLF 177 (396)
T ss_dssp --------SCC---------CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEE
T ss_pred --------CCC---------CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEE
Confidence 122 235666778888888775444578888885 578899999999997531 1256677
Q ss_pred EecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 360 SGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 360 aTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
.+...+.+|.+-| +++|.+ +|++||+ ++++|.+|+++
T Consensus 178 ~~~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li~De~~~~~ 217 (396)
T 2q7w_A 178 HGCCHNPTGIDPTLEQWQTLAQ--------------------LSVEKGW-------LPLFDFAYQGF 217 (396)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------EEEEEESCTTS
T ss_pred eCCCCCCCCCCCCHHHHHHHHH--------------------HHHHCCC-------EEEEecccccc
Confidence 7888888898855 556777 9999999 99999999876
No 214
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.88 E-value=1.9e-07 Score=105.10 Aligned_cols=117 Identities=11% Similarity=-0.049 Sum_probs=86.9
Q ss_pred cEEE--cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH----HCCccEEEEec-CC
Q psy11047 260 GGVL--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL----IGLVNMRYIES-DD 332 (943)
Q Consensus 260 ~Gvf--TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~----LG~~~v~~Vp~-D~ 332 (943)
..++ |+|||+|+..++...+. + .+| -.|++++-+|.+....+. ..+.+++.+|. ++
T Consensus 119 ~i~~~~t~ggt~al~l~~~~~~~--~------~~g---------d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 181 (448)
T 3meb_A 119 RIASCQSLSGTGSLHIGFEFLHL--W------MPK---------AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRK 181 (448)
T ss_dssp CEEEEEESHHHHHHHHHHHHHHH--H------CTT---------CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCT
T ss_pred cEEEEECCcHHHHHHHHHHHHHH--h------CCC---------CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecccc
Confidence 5788 99999998765432211 1 122 236778888888877766 54558888988 65
Q ss_pred C--CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCC
Q psy11047 333 K--LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKF 407 (943)
Q Consensus 333 ~--grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~ 407 (943)
+ +.+|+++|+++|+.... .+.+++.+...+.+|.+-+ +++|++ +|++||+
T Consensus 182 ~~~~~~d~e~l~~~l~~~~~---~~~~v~~~~p~NPtG~~~~~~~l~~i~~--------------------l~~~~~~-- 236 (448)
T 3meb_A 182 DGELEIDFSNTKKDIQSAPE---KSIFLFHACAHNPSGIDFTEAQWKELLP--------------------IMKEKKH-- 236 (448)
T ss_dssp TSCSSBCHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC--
T ss_pred ccCCCcCHHHHHHHHHhCCC---CcEEEEeCCCCCCCCcCCCHHHHHHHHH--------------------HHHHCCC--
Confidence 4 89999999999986311 2567777778888998865 555777 9999999
Q ss_pred CccchhhhHHhhhcCC
Q psy11047 408 QSVRLAQKFEALVLGD 423 (943)
Q Consensus 408 ~~l~lwLHVDAA~GG~ 423 (943)
++++|.+|+++
T Consensus 237 -----~li~Deay~~~ 247 (448)
T 3meb_A 237 -----IAFFDSAYQGF 247 (448)
T ss_dssp -----EEEEEESCTTT
T ss_pred -----EEEEecccccc
Confidence 99999999876
No 215
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.87 E-value=9.8e-08 Score=102.31 Aligned_cols=116 Identities=8% Similarity=-0.048 Sum_probs=86.1
Q ss_pred HHHHHHHHHhC---CCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 235 ITMNWLGKMIG---LPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 235 ~Vi~wLa~LlG---~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
.+.+.+++++| .+.+ ..++|+|||+++..++.+. | -.|++. -+|
T Consensus 60 ~lr~~la~~~~~~~~~~~----------~v~~~~G~~~al~~~~~~~-------------g---------d~Vl~~-p~y 106 (335)
T 1uu1_A 60 ELIEKILSYLDTDFLSKN----------NVSVGNGADEIIYVMMLMF-------------D---------RSVFFP-PTY 106 (335)
T ss_dssp HHHHHHHHHHTCSSCCGG----------GEEEESSHHHHHHHHHHHS-------------S---------EEEECS-SSC
T ss_pred HHHHHHHHHcCCCCCCHH----------HEEEcCChHHHHHHHHHHh-------------C---------CcEEEC-CCc
Confidence 34556677777 5433 6899999999997776542 1 136677 888
Q ss_pred hHHHHHHH-HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhccccccccccc
Q psy11047 312 SSVEKAGL-IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYKM 390 (943)
Q Consensus 312 ySv~KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~i 390 (943)
.+...++. .|. +++.+|.++++.+|+++| . .+.+|+.+...+.+|.+-|.+++.+
T Consensus 107 ~~~~~~~~~~g~-~~~~v~~~~~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~------------ 162 (335)
T 1uu1_A 107 SCYRIFAKAVGA-KFLEVPLTKDLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIER------------ 162 (335)
T ss_dssp HHHHHHHHHHTC-EEEECCCCTTSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHH------------
T ss_pred HHHHHHHHHcCC-eEEEeccCCCCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHH------------
Confidence 88887774 454 788888887778888876 1 2567776777888999999999998
Q ss_pred cccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 391 KLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 391 ~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++..| ++++|.+|+.+
T Consensus 163 --------l~~~~~--------~li~De~~~~~ 179 (335)
T 1uu1_A 163 --------ILKTGA--------FVALDEAYYEF 179 (335)
T ss_dssp --------HHHTTC--------EEEEECTTHHH
T ss_pred --------HHHhCC--------EEEEECcchhh
Confidence 888764 59999999754
No 216
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.87 E-value=1.9e-07 Score=103.94 Aligned_cols=132 Identities=11% Similarity=-0.012 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+..++.++|+++++ .. ...+||+|||+||..|+.+||... + ++-+|++...
T Consensus 95 ~~~~~~l~~~la~~~~-~~----------~~v~~~~sgseA~~~al~~ar~~~-~---------------~~~vi~~~~~ 147 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RG----------GMIRFVNSGTEATMTAIRLARGYT-G---------------RDLILKFDGC 147 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TT----------CEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEEETC
T ss_pred CHHHHHHHHHHHHhCC-CC----------CEEEEeCCHHHHHHHHHHHHHHhh-C---------------CCeEEEEcCC
Confidence 3445556778888884 11 257999999999999999987421 0 1223444434
Q ss_pred CchHHHHHH-------------H-HCC-----ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 310 AHSSVEKAG-------------L-IGL-----VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 310 aHySv~KAa-------------~-LG~-----~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
-|....-+. . .|. ..+..++. .|+++|++.|++.. ..+.+|++.-....+|.+
T Consensus 148 yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~ 219 (434)
T 2epj_A 148 YHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYG---DRIAGVIVEPVIANAGVI 219 (434)
T ss_dssp CCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCB
T ss_pred cCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCcc
Confidence 443221111 0 121 13556664 27999999997531 125566665544557887
Q ss_pred cc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 DS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 Dp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
-| +++|.+ +|++||+ ++++|.+|+|+
T Consensus 220 ~~~~~~l~~l~~--------------------l~~~~g~-------~lI~DEv~~g~ 249 (434)
T 2epj_A 220 PPRREFLAALQR--------------------LSRESGA-------LLILDEVVTGF 249 (434)
T ss_dssp CCCHHHHHHHHH--------------------HHHHHTC-------EEEEEETTTTT
T ss_pred CCCHHHHHHHHH--------------------HHHHcCC-------EEEEEcchhce
Confidence 76 999999 9999999 99999999876
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.87 E-value=7.1e-08 Score=107.41 Aligned_cols=127 Identities=10% Similarity=-0.067 Sum_probs=82.9
Q ss_pred HHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHH
Q psy11047 235 ITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSV 314 (943)
Q Consensus 235 ~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv 314 (943)
+..++++++++ .. ...+||+|||+||..|+.++|... + ++-++.....-|.+.
T Consensus 97 ~l~~~la~~~~-~~----------~~v~~~~~Gsea~~~ai~~a~~~~---------~-------~~~vi~~~~~yhg~~ 149 (429)
T 3k28_A 97 KLAKLVIERVP-SI----------EIVRMVNSGTEATMSALRLARGYT---------G-------RNKILKFIGCYHGHG 149 (429)
T ss_dssp HHHHHHHHHST-TC----------SEEEEESSHHHHHHHHHHHHHHHH---------T-------CCEEEEEETCCCCSC
T ss_pred HHHHHHHHhCC-CC----------CEEEEeCChHHHHHHHHHHHHHhh---------C-------CCEEEEECCCcCCCc
Confidence 34556777775 22 258999999999999999887531 1 123444455555433
Q ss_pred HHHHHHCCc-------------------cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---
Q psy11047 315 EKAGLIGLV-------------------NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS--- 372 (943)
Q Consensus 315 ~KAa~LG~~-------------------~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp--- 372 (943)
..++..+.. .+..+|.+ |+++|+++|+.... .+.+|++.-.....|.+-|
T Consensus 150 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~ 221 (429)
T 3k28_A 150 DSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPG 221 (429)
T ss_dssp GGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTT
T ss_pred HHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHH
Confidence 333221111 23333332 79999999985321 2455666555555777877
Q ss_pred -HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 -YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 -L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|.++
T Consensus 222 ~l~~l~~--------------------l~~~~~~-------~li~DEv~~g~ 246 (429)
T 3k28_A 222 FLEGLRE--------------------VTEQNGA-------LLIFDEVMTGF 246 (429)
T ss_dssp HHHHHHH--------------------HHHHHTC-------EEEEECTTTTT
T ss_pred HHHHHHH--------------------HHHHcCC-------EEEEecccccc
Confidence 999999 9999999 99999999765
No 218
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.85 E-value=8.7e-08 Score=105.42 Aligned_cols=108 Identities=7% Similarity=-0.120 Sum_probs=72.3
Q ss_pred cEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCcc-EEEEecCCCCCcCH
Q psy11047 260 GGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVN-MRYIESDDKLSLRG 338 (943)
Q Consensus 260 ~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~-v~~Vp~D~~grmD~ 338 (943)
..++|+|+|+++..++. .+ .+| -.|++.+-+|.+...++...+.. ++.+|.++++.++.
T Consensus 97 ~v~~~~G~~~al~~~~~-----~~------~~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 156 (400)
T 3asa_A 97 EIFISDGAKVDLFRLLS-----FF------GPN---------QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFP 156 (400)
T ss_dssp GEEEESCHHHHHHHHHH-----HH------CSS---------CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCC
T ss_pred HEEEccChHHHHHHHHH-----Hc------CCC---------CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCccc
Confidence 68999999999865321 11 122 23566677888888777533335 88898875443332
Q ss_pred HHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhh
Q psy11047 339 DKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQK 415 (943)
Q Consensus 339 daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLH 415 (943)
+ +++ + ..+.+|+.+...+.+|.+-| +++|++ +|+++|+ +++
T Consensus 157 ~-l~~-~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~--------------------~~~~~~~-------~li 200 (400)
T 3asa_A 157 E-FPE-D-------THIDILCLCSPNNPTGTVLNKDQLRAIVH--------------------YAIEHEI-------LIL 200 (400)
T ss_dssp C-CCT-T-------CCCSEEEEESSCTTTCCCCCHHHHHHHHH--------------------HHHHTTC-------EEE
T ss_pred C-hhh-c-------cCccEEEEeCCCCCCCCcCCHHHHHHHHH--------------------HHHHcCC-------EEE
Confidence 1 211 0 12556666677888898876 556677 8999999 999
Q ss_pred HHhhhcCC
Q psy11047 416 FEALVLGD 423 (943)
Q Consensus 416 VDAA~GG~ 423 (943)
+|.+|+++
T Consensus 201 ~De~~~~~ 208 (400)
T 3asa_A 201 FDAAYSTF 208 (400)
T ss_dssp EECTTGGG
T ss_pred EEchhhhh
Confidence 99999865
No 219
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.83 E-value=4.6e-07 Score=101.60 Aligned_cols=133 Identities=13% Similarity=0.034 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
..+++..+.+|++++++ .. ...+||+|||+||..|+.+||... + ++-+|++..
T Consensus 95 ~~~~~~~la~~l~~~~~-~~----------~~v~~~~gg~eA~~~al~~ar~~~-~---------------~~~vi~~~~ 147 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SI----------RKLRFTGSGTETTLLALRVARAFT-G---------------RRMILRFEG 147 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TC----------SEEEEESCHHHHHHHHHHHHHHHH-C---------------CCEEEEECC
T ss_pred CCHHHHHHHHHHHhhCC-CC----------CEEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEEcC
Confidence 45788889999999985 22 258999999999999999987421 0 122344443
Q ss_pred CCchHHHHHHH-----------HCC-----ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc
Q psy11047 309 QAHSSVEKAGL-----------IGL-----VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS 372 (943)
Q Consensus 309 ~aHySv~KAa~-----------LG~-----~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp 372 (943)
.-|....-+.. .|. ..+..++. .|+++|+++|+.... .+.+|+++-..+.+|.+-|
T Consensus 148 ~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~---~~~~vi~ep~~~~tG~~~~ 219 (453)
T 2cy8_A 148 HYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGS---DIAAFIAEPVGSHFGVTPV 219 (453)
T ss_dssp ----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGG---GEEEEEECSSEHHHHTEEC
T ss_pred CcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCC---CEEEEEECCCCCCCCCcCC
Confidence 44422211111 121 13444443 389999999985311 2556665544455787766
Q ss_pred ----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 373 ----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 373 ----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+++|.+ +|++||+ ++++|.+|+++
T Consensus 220 ~~~~l~~l~~--------------------l~~~~g~-------~lI~DEv~~g~ 247 (453)
T 2cy8_A 220 SDSFLREGAE--------------------LARQYGA-------LFILDEVISGF 247 (453)
T ss_dssp CHHHHHHHHH--------------------HHHHTTC-------EEEEECTTTTT
T ss_pred CHHHHHHHHH--------------------HHHHcCC-------EEEEecCcccc
Confidence 889998 9999999 99999999865
No 220
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=98.83 E-value=2.6e-08 Score=109.78 Aligned_cols=123 Identities=11% Similarity=-0.017 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+|..+.+++++++|.++. ...++|+|||+|+..++.+. +| + .|+++.-
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~---------~~~~~~~ggt~a~~~~~~~~------------~g--------d-~Vl~~~~ 106 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN---------DKCVGFNRTSSAILATILAL------------KP--------K-KVIHYLP 106 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT---------EEEEEESSHHHHHHHHHHHH------------CC--------S-EEEEECS
T ss_pred hHHHHHHHHHHHHHhCCCCc---------ceEEEEcChHHHHHHHHHhC------------CC--------C-EEEEecC
Confidence 45667788888999998421 14699999999998887642 12 1 2445555
Q ss_pred ---CchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEE-EEEecCCCccc-ccccHHHhhhhccccc
Q psy11047 310 ---AHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF-IFSGLALPAFL-VVDSYCCLGTAMIVKG 384 (943)
Q Consensus 310 ---aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~-VVaTaGTT~tG-aIDpL~eIa~~~~~~d 384 (943)
.|+++.+++...+..++.+ +|+++|+++ +. .+.+ |+.+..++.+| ...|+++|.+
T Consensus 107 ~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~------ 166 (374)
T 2aeu_A 107 ELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVIN------ 166 (374)
T ss_dssp SSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHH------
T ss_pred CCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHH------
Confidence 5777666554433456655 378888776 21 2566 66666677788 8889999999
Q ss_pred cccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 385 LGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 385 ~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++++|++++..
T Consensus 167 --------------l~~~~~~-------~li~De~~~~~ 184 (374)
T 2aeu_A 167 --------------TAKNKEA-------IVFVDDASGAR 184 (374)
T ss_dssp --------------HHHHHTC-------CEEEECTTHHH
T ss_pred --------------HHHHcCC-------EEEEECCcccc
Confidence 9999999 99999998744
No 221
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.77 E-value=3e-07 Score=104.49 Aligned_cols=128 Identities=7% Similarity=-0.040 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEE---cCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEE
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVL---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 305 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~Gvf---TsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~ 305 (943)
..++| +.+|+++|.+. .++ ++|||+||..++.+. + .|| -.|+
T Consensus 76 ~~~Le----~~lA~l~g~e~------------alv~p~~~sGt~A~~~al~al----l------~pG---------D~Vl 120 (427)
T 3hvy_A 76 RDSLD----RVYANIFNTES------------AFVRPHFVNGTHAIGAALFGN----L------RPN---------DTMM 120 (427)
T ss_dssp HHHHH----HHHHHHHTCSE------------EEEETTCCSHHHHHHHHHHHT----C------CTT---------CEEE
T ss_pred HHHHH----HHHHHHhCCCc------------eEEeCCCCcHHHHHHHHHHHh----c------CCC---------CEEE
Confidence 45565 45788999753 356 899999998776542 1 133 2355
Q ss_pred ecC-CCchHHH-----------HHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEec----CCCcccc
Q psy11047 306 CSD-QAHSSVE-----------KAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGL----ALPAFLV 369 (943)
Q Consensus 306 ~S~-~aHySv~-----------KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTa----GTT~tGa 369 (943)
+++ ..|.... ..+...+.+++.++. +++.+|+++|+++|++.. .|.+|+.+. .++.+|.
T Consensus 121 ~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~----~tklV~i~~s~gyp~nptg~ 195 (427)
T 3hvy_A 121 SICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDD----SIKLIHIQRSTGYGWRKSLR 195 (427)
T ss_dssp ECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCT----TEEEEEEESSCCSSSSCCCC
T ss_pred EeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCC----CCEEEEEECCCCCCCCcccc
Confidence 555 4554333 222222347788888 789999999999998411 266777776 6788899
Q ss_pred cccHHHhhhhccccccccccccccCchHHHHHH--cCCCCCccchhhhHHhhhcCC
Q psy11047 370 VDSYCCLGTAMIVKGLGFYKMKLQTNFPNFILS--YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 370 IDpL~eIa~~~~~~d~~~~~i~L~RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+.|+++|++ +|++ +|+ +++||.||+.+
T Consensus 196 v~dl~~i~~--------------------ia~~~~~g~-------~livD~a~~~~ 224 (427)
T 3hvy_A 196 IAEIAEIIK--------------------SIREVNENV-------IVFVDNCYGEF 224 (427)
T ss_dssp HHHHHHHHH--------------------HHHHHCSSS-------EEEEECTTCTT
T ss_pred HHHHHHHHH--------------------HHHHhCCCC-------EEEEECCcccc
Confidence 999999999 9999 899 99999999765
No 222
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.75 E-value=2.1e-07 Score=107.94 Aligned_cols=163 Identities=2% Similarity=-0.104 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHHhccCcccc-CChhHHHHHHHHHHHHHHHhC--CCccccccCcCCCCcEEEcCChHHHHHHHHHHHHH
Q psy11047 204 YPSLLGDMLSDAINCLGFTWA-SSPACTELEIITMNWLGKMIG--LPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRT 280 (943)
Q Consensus 204 ~~silgd~L~~alN~n~~~~~-~SPaateLE~~Vi~wLa~LlG--~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~ 280 (943)
++.++..+...+... .|. .+....+++..+.+++++..| .+... ....++|+|||+|+..++.+...
T Consensus 117 ~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-------~~~i~~t~G~t~al~~~~~~l~~ 186 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAE-------QTDLFPTEGGTAAIVYAFHSLAE 186 (533)
T ss_dssp HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG-------GEEEEEEEHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC-------cceEEEECCHHHHHHHHHHHhhh
Confidence 466676666655532 232 334567889999999977733 22110 02589999999999877764211
Q ss_pred HHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHHHCCccEEEEecC----CCCCcCHHHHHHHHHHhhccCCCcE
Q psy11047 281 EAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVNMRYIESD----DKLSLRGDKLIEAIERDKKKHLIPF 356 (943)
Q Consensus 281 ~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~D----~~grmD~daLe~aI~~d~~kG~~P~ 356 (943)
+.+ ..+ .-.|+++.-+|.+...++.+.+..++.++++ +++.+|+++|++++..+ +.
T Consensus 187 ~~l-----~~~---------gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k 246 (533)
T 3f6t_A 187 NHL-----LKK---------GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IK 246 (533)
T ss_dssp TTS-----SCT---------TCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTT------EE
T ss_pred hhc-----cCC---------cCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCC------Ce
Confidence 100 012 2357788999999887775433477777764 56899999999988643 56
Q ss_pred EEEEecCCCcccccccHH---HhhhhccccccccccccccCchHHHHH-HcCCCCCccchhhhHHhhhcCC
Q psy11047 357 FIFSGLALPAFLVVDSYC---CLGTAMIVKGLGFYKMKLQTNFPNFIL-SYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 357 ~VVaTaGTT~tGaIDpL~---eIa~~~~~~d~~~~~i~L~RrfR~iar-~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|+.+..++.+|.+-|.+ +|++ +|+ +||+ ++++|.+|+++
T Consensus 247 ~v~l~~p~NPtG~~~~~~~l~~l~~--------------------la~~~~~~-------~li~De~y~~~ 290 (533)
T 3f6t_A 247 ALIVVNPTNPTSKEFDTNALNAIKQ--------------------AVEKNPKL-------MIISDEVYGAF 290 (533)
T ss_dssp EEEEESSCTTTCBCCCHHHHHHHHH--------------------HHHHCTTC-------EEEEECTTGGG
T ss_pred EEEEeCCCCCCccccCHHHHHHHHH--------------------HHHhCCCC-------EEEEcCCcccc
Confidence 777777778899986655 6666 888 6899 99999999865
No 223
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=98.72 E-value=1e-07 Score=108.09 Aligned_cols=129 Identities=7% Similarity=-0.082 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC-CCch
Q psy11047 234 IITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD-QAHS 312 (943)
Q Consensus 234 ~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~-~aHy 312 (943)
..+.+++++++|.+... .-++++|||+||..++.+.. .+| + .|++++ ..|.
T Consensus 68 ~~l~~~la~~~g~~~~~---------~~i~~~sGt~Ai~~al~al~----------~~G--------d-~Vl~~~~~~y~ 119 (431)
T 3ht4_A 68 DTLEKVYADVFGAEAGL---------VRPQIISGTHAISTALFGIL----------RPG--------D-ELLYITGKPYD 119 (431)
T ss_dssp HHHHHHHHHHTTCSEEC---------CBTTSCSHHHHHHHHHHTTC----------CTT--------C-EEEECSSSCCT
T ss_pred HHHHHHHHHHhCCCccc---------ccceeeCHHHHHHHHHHHhC----------CCC--------C-EEEEeCCCCch
Confidence 34566889999987541 11224588999988875321 122 2 355555 7788
Q ss_pred HHHHHHHH----------CCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEec----CCCcccccccHHHhhh
Q psy11047 313 SVEKAGLI----------GLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGL----ALPAFLVVDSYCCLGT 378 (943)
Q Consensus 313 Sv~KAa~L----------G~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTa----GTT~tGaIDpL~eIa~ 378 (943)
+...++.+ .+..++.++.+.+|.+|+++|+++|+++ +.+|+.+. .+..+|.+.++++|++
T Consensus 120 ~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~ 193 (431)
T 3ht4_A 120 TLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIA 193 (431)
T ss_dssp THHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHH
T ss_pred hHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 77766532 2347889999889999999999998753 66777765 6777889999999999
Q ss_pred hccccccccccccccCchHHHHHH--cCCCCCccchhhhHHhhhcCC
Q psy11047 379 AMIVKGLGFYKMKLQTNFPNFILS--YFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 379 ~~~~~d~~~~~i~L~RrfR~iar~--~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|+ ++++|.+|+.+
T Consensus 194 --------------------la~~~~~~~-------~livDea~~~~ 213 (431)
T 3ht4_A 194 --------------------FVKEIKPDV-------VVFVDNCYGEF 213 (431)
T ss_dssp --------------------HHHHHCTTC-------EEEEECTTCTT
T ss_pred --------------------HHHhhCCCC-------EEEEeCCChhh
Confidence 9999 999 99999999877
No 224
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.55 E-value=2.6e-06 Score=94.55 Aligned_cols=131 Identities=13% Similarity=0.014 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
..+..++.++++++++ .. ...+||+|||+||..|+.+||... + ++-+|+....
T Consensus 91 ~~~~~~l~~~l~~~~~-~~----------~~v~~~~~g~ea~~~al~~ar~~~-~---------------~~~vi~~~~~ 143 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FV----------DLVRFVNSGTEATMSALRLARGYT-G---------------RPYIVKFRGN 143 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TC----------CEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTC
T ss_pred CHHHHHHHHHHHHhCC-CC----------CEEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEECCC
Confidence 3455566778888875 22 257999999999999999887531 0 1224444444
Q ss_pred CchHHHHHHH--------------HCC-----ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccc
Q psy11047 310 AHSSVEKAGL--------------IGL-----VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVV 370 (943)
Q Consensus 310 aHySv~KAa~--------------LG~-----~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaI 370 (943)
-|....-+.. .|. ..+..+|. .|+++|++.|+.... .+.+|+++--..++|.+
T Consensus 144 yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~ 215 (424)
T 2e7u_A 144 YHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGE---EIAAIIFEPVVGNAGVL 215 (424)
T ss_dssp CCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCB
T ss_pred cCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCC---CEEEEEEeCCCCCCCCc
Confidence 4532221111 111 13455553 379999999975311 24555555444447877
Q ss_pred cc----HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 371 DS----YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 371 Dp----L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
-| +++|.+ + ++||+ ++.+|.+|+++
T Consensus 216 ~~~~~~l~~l~~--------------------l-~~~g~-------~lI~DEv~~g~ 244 (424)
T 2e7u_A 216 VPTEDFLKALHE--------------------A-KAYGV-------LLIADEVMTGF 244 (424)
T ss_dssp CCCHHHHHHHHH--------------------G-GGGTC-------EEEEECTTTTT
T ss_pred CCCHHHHHHHHH--------------------H-HHcCC-------EEEEecCcccc
Confidence 66 888888 9 99999 99999999876
No 225
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.54 E-value=4e-06 Score=92.31 Aligned_cols=148 Identities=9% Similarity=-0.083 Sum_probs=98.1
Q ss_pred cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcE--EEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcC
Q psy11047 222 TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGG--VLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN 299 (943)
Q Consensus 222 ~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~G--vfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~ 299 (943)
.|...+...++...+.+|+. |.....+. .... ..|.|||+|+..+..+.+.. ..+
T Consensus 74 ~y~~~~g~~~lr~~ia~~~~---~~~~~~~~-----~~~i~~~~~~~g~ga~~~~~~~~~~~-------~~~-------- 130 (409)
T 4eu1_A 74 DYAPVTGIASFVEEAQKLCF---GPTCAALR-----DGRIASCQTLGGTGALRIGGDLLNRF-------VAN-------- 130 (409)
T ss_dssp CCCCTTCCHHHHHHHHHHHH---CSSCHHHH-----TTCEEEEEESHHHHHHHHHHHHGGGT-------SSS--------
T ss_pred cCCCCCCcHHHHHHHHHHHc---CCCchhhc-----cCceeeeecccchHHHHHHHHHHHHh-------cCC--------
Confidence 34334445677777766662 44310000 0123 45999999987665443210 011
Q ss_pred CceEEEecCCCchHHHHHHHHCCccEEEEec--CCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HH
Q psy11047 300 SRLVAYCSDQAHSSVEKAGLIGLVNMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YC 374 (943)
Q Consensus 300 ~~~vV~~S~~aHySv~KAa~LG~~~v~~Vp~--D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~ 374 (943)
.-.|++.+-+|.+...++...+.+++.++. ++++.+|+++|+++++.... .+.+++.+...+.+|.+-+ ++
T Consensus 131 -gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~i~~~~p~NPtG~~~~~~~l~ 206 (409)
T 4eu1_A 131 -CNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPE---GSVILVHACAHNPTGVDPTHDDWR 206 (409)
T ss_dssp -CCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHH
T ss_pred -CCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCC---CcEEEEECCCCCCCCCCCCHHHHH
Confidence 134677788999888888654457888887 45689999999999975321 2556666677888998866 55
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++ +|++||+ ++++|.+|+++
T Consensus 207 ~i~~--------------------~~~~~~~-------~li~De~y~~~ 228 (409)
T 4eu1_A 207 QVCD--------------------VIKRRNH-------IPFVDMAYQGF 228 (409)
T ss_dssp HHHH--------------------HHHHTTC-------EEEEEESCTTT
T ss_pred HHHH--------------------HHHhCCc-------EEEEecccccc
Confidence 5777 9999999 99999999876
No 226
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.00 E-value=0.00021 Score=82.16 Aligned_cols=139 Identities=13% Similarity=0.081 Sum_probs=82.0
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcE--EEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCce
Q psy11047 225 SSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGG--VLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL 302 (943)
Q Consensus 225 ~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~G--vfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~ 302 (943)
..-...++|..+++...+|||++.. .|| |=-.+||.||+.+.++- + .||-+ + +
T Consensus 94 Gce~vD~iE~la~~rak~lF~a~~A---------~w~VNVQP~SGs~AN~avy~Al----l------~PGD~---i---l 148 (490)
T 3ou5_A 94 GAEVVDEIELLCQRRALEAFDLDPA---------QWGVNVQPYSGSPANLAVYTAL----L------QPHDR---I---M 148 (490)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCTT---------TEEEECCCSSHHHHHHHHHHHH----C------C-CCC---E---E
T ss_pred CChHHHHHHHHHHHHHHHHhCCCcc---------ccCCCCCcCCHHHHHHHHHHHH----c------CCCCE---E---E
Confidence 3446789999999999999999865 244 45568999998776642 1 24421 0 0
Q ss_pred EEEecCCCchHHHHHH---HH---CC-ccEEEEecC-CCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHH
Q psy11047 303 VAYCSDQAHSSVEKAG---LI---GL-VNMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYC 374 (943)
Q Consensus 303 vV~~S~~aHySv~KAa---~L---G~-~~v~~Vp~D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~ 374 (943)
.+=.+.-.|.|-.... .+ |. -+....++| +++.+|.+++++...+.+ |.+|++ |....--.-|++
T Consensus 149 g~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~k-----PklIi~--G~SaY~r~id~~ 221 (490)
T 3ou5_A 149 GLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIA--GTSAYARLIDYA 221 (490)
T ss_dssp CBC----------------------------CBCEETTTTEECHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHH
T ss_pred ecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcC-----CCeEEE--CCccCccccCHH
Confidence 1112455665543211 11 21 123333455 679999999999888763 777774 434433445588
Q ss_pred HhhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 375 CLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 375 eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
++.+ +|++.|. ++.+|.|+=+
T Consensus 222 ~~re--------------------IAd~vGA-------~Lm~DmAHia 242 (490)
T 3ou5_A 222 RMRE--------------------VCDEVKA-------HLLADMAHIS 242 (490)
T ss_dssp HHHH--------------------HHHHHTC-------EEEEECGGGH
T ss_pred HHHH--------------------HHhhccc-------EEEechhhhh
Confidence 8887 9999999 9999999543
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.98 E-value=0.00028 Score=81.04 Aligned_cols=129 Identities=13% Similarity=0.023 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCc
Q psy11047 232 LEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH 311 (943)
Q Consensus 232 LE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aH 311 (943)
+|.+..+.|++++... ....|+++|||||..||.+||.+.- .+-+|.+...-|
T Consensus 128 ~~~~lae~l~~~~p~~-----------~~v~f~~SGsEA~e~AiklAr~~tg----------------r~~ii~~~~~yH 180 (454)
T 4ao9_A 128 LEGRLARLICERFPQI-----------EQLRFTNSGTEANLMALTAALHFTG----------------RRKIVVFSGGYH 180 (454)
T ss_dssp SHHHHHHHHHHHSTTC-----------SEEEEESSHHHHHHHHHHHHHHHHT----------------CCEEEEETTCBC
T ss_pred HHHHHHHHHHHhCCCC-----------CEEEEeCchHHHHHHHHHHHHhccc----------------CCeEEEEeCCcC
Confidence 4445556677777422 2478999999999999999996521 112333444444
Q ss_pred hHHHHHHHH-CC----ccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HHHhhhhccc
Q psy11047 312 SSVEKAGLI-GL----VNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YCCLGTAMIV 382 (943)
Q Consensus 312 ySv~KAa~L-G~----~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~eIa~~~~~ 382 (943)
-...-++.. +. .....+|-+ |.+++++.|++...+ ..+|+.----.+.|.+-| |++|.+
T Consensus 181 G~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l~~~~~~---iAavIvEPv~g~~G~~~p~~~fL~~lr~---- 248 (454)
T 4ao9_A 181 GGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQIERHGPE---IAVVLVEPMQGASGCIPGQPDFLQALRE---- 248 (454)
T ss_dssp STTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHHHHTGGG---EEEEEECSEESTTTCEECCHHHHHHHHH----
T ss_pred CccccccccccCccCCCCcccCCCc-----hHHHHHHHHhhcCCc---eEEEEeccccCCCCccCCchhhHHHHHH----
Confidence 322111111 10 123444443 689999999865322 334443222223466655 888888
Q ss_pred cccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 383 KGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
+|++||+ ++.+|-.+.|
T Consensus 249 ----------------lc~~~g~-------lLI~DEV~tG 265 (454)
T 4ao9_A 249 ----------------SATQVGA-------LLVFDEVMTS 265 (454)
T ss_dssp ----------------HHHHHTC-------EEEEECTTGG
T ss_pred ----------------HHhhcCC-------EEEEECCCcC
Confidence 9999999 9999977654
No 228
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.21 E-value=9.9e-07 Score=101.37 Aligned_cols=131 Identities=11% Similarity=-0.044 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
+..+.++.+.|+++++ .. ....|++||||||..|+.+||... | .+-+|.+...
T Consensus 139 ~~~~~~Lae~L~~~~p-~~----------~~v~~~nSGseA~~~Aik~ar~~t---------g-------r~~ii~~~~~ 191 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SI----------DLVRFTNSGTEANLMALATATAIT---------G-------RKTVLAFDGG 191 (465)
Confidence 3455556667777774 11 146899999999999999987421 1 1122333334
Q ss_pred CchHHHHHH----HHCCc-cEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc----HHHhhhhc
Q psy11047 310 AHSSVEKAG----LIGLV-NMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS----YCCLGTAM 380 (943)
Q Consensus 310 aHySv~KAa----~LG~~-~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp----L~eIa~~~ 380 (943)
-|-+..-++ ..|.. .+..+|- -|+++|++.|+... ..+.+|+..--..++|.+-| +++|.+
T Consensus 192 yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~~~~l~~l~~-- 261 (465)
T 2yky_A 192 YHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAERAFLDLLRA-- 261 (465)
Confidence 443332222 11110 2222332 26889999887531 12444554333344786655 888888
Q ss_pred cccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+|++||+ ++.+|.++. +
T Consensus 262 ------------------l~~~~g~-------llI~DEv~~-~ 278 (465)
T 2yky_A 262 ------------------EASRCGA-------LLIFDEVMT-S 278 (465)
Confidence 9999999 999999998 5
No 229
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=97.92 E-value=0.00038 Score=81.19 Aligned_cols=138 Identities=7% Similarity=-0.096 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhCC---CccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEec
Q psy11047 231 ELEIITMNWLGKMIGL---PEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS 307 (943)
Q Consensus 231 eLE~~Vi~wLa~LlG~---p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S 307 (943)
..|..+..|+.+-.+. +.. ....++|+|+++++..++.+...+. + ..+| -.|++.
T Consensus 143 lr~~ia~~~~~~~~~~~~~~~~--------~~~I~~t~G~~eal~~~~~~l~~~~---l--~~~G---------d~Vlv~ 200 (546)
T 2zy4_A 143 ISEKIVRQYIIREMGADAIPSE--------SVNLFAVEGGTAAMAYIFESLKLNG---L--LKAG---------DKVAIG 200 (546)
T ss_dssp HHHHHHHHHHHHHTTCTTSCGG--------GEEEEEEEHHHHHHHHHHHHHHHTT---S--SCTT---------CEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCCCC--------cceEEEECCHHHHHHHHHHHhhhhh---c--CCCC---------CEEEEe
Confidence 4455566676665543 211 1267999999999877765411000 0 0122 246667
Q ss_pred CCCchHHHHHHHH-C-CccEEEEecCCC--CCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhc
Q psy11047 308 DQAHSSVEKAGLI-G-LVNMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAM 380 (943)
Q Consensus 308 ~~aHySv~KAa~L-G-~~~v~~Vp~D~~--grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~ 380 (943)
+-+|.....++.+ + +..++.++++++ +.+|+++|++.+.. .+.+|+.+...+.+|.+-+ +++|.+
T Consensus 201 ~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~-- 272 (546)
T 2zy4_A 201 MPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRN-- 272 (546)
T ss_dssp ESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHH--
T ss_pred CCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHH--
Confidence 7788888777654 3 347888887643 56999999876532 2566777778888999866 455566
Q ss_pred cccccccccccccCchHHHH--HHcCCCCCccchhhhHHhhhcCC
Q psy11047 381 IVKGLGFYKMKLQTNFPNFI--LSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 381 ~~~d~~~~~i~L~RrfR~ia--r~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
+| +++|+ ++.+|.+|+.+
T Consensus 273 ------------------~a~~~~~~~-------~ii~De~y~~~ 292 (546)
T 2zy4_A 273 ------------------IVAEHRPDL-------MILTDDVYGTF 292 (546)
T ss_dssp ------------------HHHHTCTTC-------EEEEECTTGGG
T ss_pred ------------------HHHhccCCc-------EEEEeCcchhh
Confidence 77 78999 99999999865
No 230
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=97.85 E-value=0.0004 Score=76.71 Aligned_cols=126 Identities=10% Similarity=-0.086 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCC
Q psy11047 230 TELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQ 309 (943)
Q Consensus 230 teLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~ 309 (943)
.++...+.+|+. ..|++-. .....++|+|+|+++..++.+-. . +|- ..+..|++++-
T Consensus 71 ~~lr~aia~~~~-~~g~~~~-------~~~~i~~t~G~~~al~~~~~~l~----~------~Gd-----~~~~~Vlv~~P 127 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAAT-------EDRYIVVGTGSTQLCQAAVHALS----S------LAR-----SQPVSVVAAAP 127 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCC-------SSSEEEEEEHHHHHHHHHHHHHH----H------TSS-----SSSEEEEECSS
T ss_pred HHHHHHHHHHHH-hcCCCCC-------CCCeEEEeCChHHHHHHHHHHhc----C------CCC-----CCcceEEEcCC
Confidence 677777777766 4455321 01268999999999877765421 1 220 01125778888
Q ss_pred CchHHHHHHHHCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCcccccccHHHhhhhcccccccccc
Q psy11047 310 AHSSVEKAGLIGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDSYCCLGTAMIVKGLGFYK 389 (943)
Q Consensus 310 aHySv~KAa~LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDpL~eIa~~~~~~d~~~~~ 389 (943)
+|.+...++...+.+++.+++|.++ ++ . ..+.+|+.+...+.+|.+-+ +|++
T Consensus 128 ~y~~~~~~~~~~g~~~~~~~~d~~~-l~---------~-----~~~k~v~l~~p~NPtG~~~~--~l~~----------- 179 (391)
T 3bwn_A 128 FYSTYVEETTYVRSGMYKWEGDAWG-FD---------K-----KGPYIELVTSPNNPDGTIRE--TVVN----------- 179 (391)
T ss_dssp CCTHHHHHHHTTCBTTEEEEEESTT-CC---------C-----CSCEEEEEESSCTTTCCCCC--CCC------------
T ss_pred CchhHHHHHHHcCCeEEEecCCHHH-cC---------C-----CCCEEEEECCCCCCCchhHH--HHHH-----------
Confidence 9999888886434466777776543 22 0 12567777888888998864 3333
Q ss_pred ccccCchHHHHHHcCCCCCccchhhhHHhhhcC
Q psy11047 390 MKLQTNFPNFILSYFPKFQSVRLAQKFEALVLG 422 (943)
Q Consensus 390 i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG 422 (943)
-++.+++ |+++|.+|+.
T Consensus 180 ---------~~~~~~~-------~ii~De~y~~ 196 (391)
T 3bwn_A 180 ---------RPDDDEA-------KVIHDFAYYW 196 (391)
T ss_dssp -------------CCC-------EEEEECTTCS
T ss_pred ---------HhhcCCC-------EEEEeCCCCC
Confidence 2222338 9999999973
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.81 E-value=0.0016 Score=74.92 Aligned_cols=55 Identities=15% Similarity=0.220 Sum_probs=43.7
Q ss_pred HHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy11047 641 LTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTATEILAELA 700 (943)
Q Consensus 641 l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~~ll~~~~ 700 (943)
+..++.+.+.++|.+ +.+. + .++|+.....+|++|||++++.+++..++++++++
T Consensus 419 ~~~~~~~~~~~~Gll-~~~~---g-~~i~l~PPL~it~~eid~~~~~l~~al~~v~aelA 473 (473)
T 4e3q_A 419 VSERIANTCTDLGLI-CRPL---G-QSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEVA 473 (473)
T ss_dssp HHHHHHHHHHHTTEE-CEEE---T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCcE-EEec---C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456788888888864 4332 3 47898777778999999999999999999988863
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.61 E-value=0.036 Score=63.53 Aligned_cols=52 Identities=8% Similarity=-0.009 Sum_probs=38.2
Q ss_pred hHHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 640 ILTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 640 ~l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
.+..++.+++.++|.+.. ++.. ...+||+.....+|+++|+++++.|.+..+
T Consensus 402 ~~~~~v~~~~~~~Gvl~~-~~g~-~~~~irl~PpL~it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 402 ELTKAVAAACLKEGVIIL-TCGT-YGNVIRLLPPLVISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp HHHHHHHHHHHHTTEECE-EECT-TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEE-ecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 456778888889996533 2211 235899987777899999999999887754
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.19 E-value=0.0048 Score=75.77 Aligned_cols=48 Identities=15% Similarity=0.033 Sum_probs=37.5
Q ss_pred HHHHHHHHHhccCcEEEeecccCCCcEEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy11047 641 LTEKLLKRLNSKGRLHCVPASLRIQGLGRAQNFTRTTNDDITRDWNEIRNTAT 693 (943)
Q Consensus 641 l~~~Ll~~L~~~G~~~~s~t~~~g~~~lR~v~~~~tt~edId~ll~~I~~~~~ 693 (943)
....+.+++.++|. ++.+. ...+|++..+.+|++||+++++.|.++.+
T Consensus 779 ~a~~~~~~l~e~Gv-~v~p~----g~~lrl~pp~~~t~e~id~~~~~l~~~l~ 826 (831)
T 4a0g_A 779 YAKSLLIMLREDGI-FTRPL----GNVIYLMCGPCTSPEICRRLLTKLYKRLG 826 (831)
T ss_dssp HHHHHHHHHHHTTE-ECCCB----TTEEEEECCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCc-EEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 45678888888885 44432 36899998899999999999999987643
No 234
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=97.07 E-value=0.0011 Score=74.58 Aligned_cols=112 Identities=4% Similarity=-0.126 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecC
Q psy11047 229 CTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD 308 (943)
Q Consensus 229 ateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~ 308 (943)
..+++..+.+|+.+.-+.... ....++|+|+|+++..++.+- .. ...+ ....+.-.|++++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~--------~~~iv~t~G~~~al~~~~~~l-----~~---~~~~---~~~~~Gd~Vlv~~ 162 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAK--------DRYIVFGVGVTQLIHGLVISL-----SP---NMTA---TPDAPESKVVAHA 162 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCT--------TCEEEEESHHHHHHHHHHHHH-----SC---CTTT---CTTSCCEEEEECS
T ss_pred hHHHHHHHHHHHHHhCCcCCC--------CCEEEEeCCHHHHHHHHHHHH-----hh---cccc---ccCCCCCEEEEeC
Confidence 577888888888765432211 136899999999987776542 00 0000 0001223577888
Q ss_pred CCchHHHHHHH-HCCccEEEEecCCCCCcCHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc
Q psy11047 309 QAHSSVEKAGL-IGLVNMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS 372 (943)
Q Consensus 309 ~aHySv~KAa~-LG~~~v~~Vp~D~~grmD~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp 372 (943)
-.|.+...++. .|. +++. +.+|+++|++++... +.+|+.+..++.+|.+-+
T Consensus 163 P~y~~~~~~~~~~g~-~~~~------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~ 214 (427)
T 2hox_A 163 PFYPVFREQTKYFDK-KGYV------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH 214 (427)
T ss_dssp SCCHHHHHHHHHSCB-TTEE------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC
T ss_pred CCcccHHHHHHHcCC-eeee------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH
Confidence 89988888875 454 3322 346778887766542 566777778888998877
No 235
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=96.50 E-value=0.018 Score=64.62 Aligned_cols=147 Identities=11% Similarity=0.029 Sum_probs=95.6
Q ss_pred cccCChhHHHHHHHHHHHHHHHhCCCccccccCcCCCCcEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCc
Q psy11047 222 TWASSPACTELEIITMNWLGKMIGLPEEFLHTKVDSPGGGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR 301 (943)
Q Consensus 222 ~~~~SPaateLE~~Vi~wLa~LlG~p~~fl~~~~~~~~~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~ 301 (943)
.|.......++-..+.+|+.+.-+.+.. ...-..++|.||++|...++.+-.+ + .+
T Consensus 67 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~------~~~i~i~~t~G~~~al~~~~~~l~~-----~------------~~- 122 (405)
T 3k7y_A 67 PYLLGNGTEDFSTLTQNLIFGNNSKYIE------DKKICTIQCIGGTGAIFVLLEFLKM-----L------------NV- 122 (405)
T ss_dssp CCCTTSSCHHHHHHHHHHHHCSSCTTTT------TTCEEEEEEEHHHHHHHHHHHHHHT-----T------------TC-
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCCcccc------ccceEEEEcCchHHHHHHHHHHHHh-----c------------CC-
Confidence 4444445566777777777544333211 0001368999999998776553210 0 02
Q ss_pred eEEEecCCCchHHHHHHHHCCccEEEEec-C-CCCCcCHHHHHHHHHHhhccCCCcEEEEEec-CCCccccccc---HHH
Q psy11047 302 LVAYCSDQAHSSVEKAGLIGLVNMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFIFSGL-ALPAFLVVDS---YCC 375 (943)
Q Consensus 302 ~vV~~S~~aHySv~KAa~LG~~~v~~Vp~-D-~~grmD~daLe~aI~~d~~kG~~P~~VVaTa-GTT~tGaIDp---L~e 375 (943)
-.|++.+-+......++.+-+.+++.+|. + +++.+|.++|+++++.... +.+++.+. ..+-||.+-+ +++
T Consensus 123 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~NPTG~~~s~~~~~~ 198 (405)
T 3k7y_A 123 ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCYNPCSVNIEEKYFDE 198 (405)
T ss_dssp CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSCTTTCCCCCHHHHHH
T ss_pred CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCCCCCCCCCCHHHHHH
Confidence 24666666666666666554458888887 3 3589999999999986321 33555544 3688898855 566
Q ss_pred hhhhccccccccccccccCchHHHHHHcCCCCCccchhhhHHhhhcCC
Q psy11047 376 LGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLAQKFEALVLGD 423 (943)
Q Consensus 376 Ia~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lwLHVDAA~GG~ 423 (943)
|++ +|++|++ |+-.|-+|+..
T Consensus 199 l~~--------------------~~~~~~~-------~vi~De~Y~~l 219 (405)
T 3k7y_A 199 IIE--------------------IVLHKKH-------VIIFDIAYQGF 219 (405)
T ss_dssp HHH--------------------HHHHHCC-------EEEEEESCTTT
T ss_pred HHH--------------------HHHHCCe-------EEEEecCcccc
Confidence 677 8999999 99999999876
No 236
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=96.15 E-value=0.082 Score=59.83 Aligned_cols=119 Identities=14% Similarity=0.036 Sum_probs=77.6
Q ss_pred cEEEcCChHHHHHHHHHHHHHHHHHhhcccCCCchhhhcCCceEEEecCCCchHHHHHHH-HCCccEEEEec--CCCCCc
Q psy11047 260 GGVLQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-IGLVNMRYIES--DDKLSL 336 (943)
Q Consensus 260 ~GvfTsGGTeANL~AL~aAR~~~l~~~~~~~pGl~~~~i~~~~vV~~S~~aHySv~KAa~-LG~~~v~~Vp~--D~~grm 336 (943)
..+-|.|||.|.-.|+....... ..|| -.|++++-+-.+-..... .|...|...+. ++.+.+
T Consensus 111 ~~~qt~ggtga~~~a~~~l~~~~------~~pg---------d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~ 175 (420)
T 4h51_A 111 VAVQTLSGTGAVSLGAKLLTRVF------DAET---------TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSL 175 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTTS------CTTT---------SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEE
T ss_pred ceeeecCchHHHHHHHHHHHHhc------CCCC---------CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCC
Confidence 45679999999887766432110 0122 225555544333333333 46544544432 356788
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEEecCCCccccccc---HHHhhhhccccccccccccccCchHHHHHHcCCCCCccchh
Q psy11047 337 RGDKLIEAIERDKKKHLIPFFIFSGLALPAFLVVDS---YCCLGTAMIVKGLGFYKMKLQTNFPNFILSYFPKFQSVRLA 413 (943)
Q Consensus 337 D~daLe~aI~~d~~kG~~P~~VVaTaGTT~tGaIDp---L~eIa~~~~~~d~~~~~i~L~RrfR~iar~~Gl~~~~l~lw 413 (943)
|.+.+.+.+..... ...+++.+...+-||.+-+ +++|++ +|+++++ |
T Consensus 176 d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~~~~~~~~~i~~--------------------~~~~~~~-------~ 225 (420)
T 4h51_A 176 NFEGMKKDILAAPD---GSVFILHQCAHNPTGVDPSQEQWNEIAS--------------------LMLAKHH-------Q 225 (420)
T ss_dssp CHHHHHHHHHHSCS---SCEEEEESSSCTTTCCCCCHHHHHHHHH--------------------HHHHHTC-------E
T ss_pred CHHHHHHHHhccCC---CcEEEEeCCCCCCCCCCCCHHHHHHHHH--------------------HHHhcCc-------e
Confidence 99999998876532 2556666677888998744 677777 9999999 9
Q ss_pred hhHHhhhcCC
Q psy11047 414 QKFEALVLGD 423 (943)
Q Consensus 414 LHVDAA~GG~ 423 (943)
+-.|-+|.++
T Consensus 226 ~~~D~~Y~~~ 235 (420)
T 4h51_A 226 VFFDSAYQGY 235 (420)
T ss_dssp EEEEESCTTT
T ss_pred Eeeehhhhhh
Confidence 9999999887
No 237
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=74.83 E-value=1.4 Score=49.88 Aligned_cols=82 Identities=43% Similarity=0.674 Sum_probs=54.9
Q ss_pred cccccccccccCchHH-----HHHHcCCCC------CccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHH
Q psy11047 383 KGLGFYKMKLQTNFPN-----FILSYFPKF------QSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKL 451 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~-----iar~~Gl~~------~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kl 451 (943)
.|+.+|+++++|+|+. ..+.+|.++ +..++.-++-..+...+.|++..++.++.||||+.+.+..++++
T Consensus 348 ~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l 427 (481)
T 4e1o_A 348 TDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENV 427 (481)
T ss_dssp CCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHH
T ss_pred CCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHH
Confidence 4778899999999882 223333322 11222333333444444578877888999999998777788899
Q ss_pred HHHhhccCccccc
Q psy11047 452 LKRLNSKGRLHCV 464 (943)
Q Consensus 452 l~~l~~~G~~~~p 464 (943)
.+++.+.|.+.+.
T Consensus 428 ~~~L~~~g~~~~~ 440 (481)
T 4e1o_A 428 LKEIAKAGRLFLI 440 (481)
T ss_dssp HHHHHHHCSSBCE
T ss_pred HHHHHhCCeEEEE
Confidence 9998888876543
No 238
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=74.81 E-value=1 Score=51.11 Aligned_cols=82 Identities=32% Similarity=0.547 Sum_probs=47.8
Q ss_pred cccccccccccCchHH-----HHHHcCCCC------CccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHH
Q psy11047 383 KGLGFYKMKLQTNFPN-----FILSYFPKF------QSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKL 451 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~-----iar~~Gl~~------~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kl 451 (943)
.|+.+|+++++|+|+. ..+.+|.++ +..++.-++-..+...+.|++..++.++.|||++.+.+..++++
T Consensus 341 ~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l 420 (475)
T 3k40_A 341 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEAL 420 (475)
T ss_dssp --------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHH
T ss_pred CCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHH
Confidence 5678889999999882 122233221 11222333333343334567777888999999998777788899
Q ss_pred HHHhhccCccccc
Q psy11047 452 LKRLNSKGRLHCV 464 (943)
Q Consensus 452 l~~l~~~G~~~~p 464 (943)
.+++++.|.+.+.
T Consensus 421 ~~~L~~~g~~~~~ 433 (475)
T 3k40_A 421 LKRINGRGHIHLV 433 (475)
T ss_dssp HHHHHHHTSCBCE
T ss_pred HHHHHhCCcEEEE
Confidence 9999888876543
No 239
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=42.77 E-value=9.8 Score=42.69 Aligned_cols=80 Identities=39% Similarity=0.615 Sum_probs=47.6
Q ss_pred cccccccccccCchHHH-----HHHcCCCC------CccchhhhHHhhhcCCCccccccccccceeeeeecchhhhHHHH
Q psy11047 383 KGLGFYKMKLQTNFPNF-----ILSYFPKF------QSVRLAQKFEALVLGDPRFEIPAARHLGMVVIRLLGENILTEKL 451 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~i-----ar~~Gl~~------~~l~lwLHVDAA~GG~~afeLp~~~~Lg~VcFR~~~~ne~n~kl 451 (943)
.|+.+|+++++||++.+ .+.+|.++ +..+..-++-..+...+.++++.++.++.+|||+.+.++.++++
T Consensus 344 ~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l 423 (486)
T 1js3_A 344 TDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEAL 423 (486)
T ss_dssp CCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHH
T ss_pred CCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHH
Confidence 56677888999998721 12222211 11112222222233233467766678899999998656677888
Q ss_pred HHHhhccCccc
Q psy11047 452 LKRLNSKGRLH 462 (943)
Q Consensus 452 l~~l~~~G~~~ 462 (943)
.+++.+.|.++
T Consensus 424 ~~~L~~~g~~~ 434 (486)
T 1js3_A 424 LERINSARKIH 434 (486)
T ss_dssp HHHHHHHTSCB
T ss_pred HHHHHhcCCEE
Confidence 88887777553
No 240
>3vpj_E TSE1-specific immunity protein; hydrolase-hydrolase inhibitor complex; 2.50A {Pseudomonas aeruginosa}
Probab=30.64 E-value=9.7 Score=36.59 Aligned_cols=43 Identities=26% Similarity=0.325 Sum_probs=13.3
Q ss_pred cCCCCccchhccchhhhccchhHHhhhcccccceeeeccC-CChHH
Q psy11047 733 ANSPMSPKIMNGSFAAVFDADESIMNGWTHGIAQIQCDSN-DSPSM 777 (943)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 777 (943)
-|+.---|.+.|+|||+|-.-+.-+..| ||-++.|-+| +||.|
T Consensus 15 vprgshmkllagsfaalflslsaqaadc--tftqleivpqfgspnm 58 (192)
T 3vpj_E 15 VPRGSHMKLLAGSFAALFLSLSAQAADC--TFTQLEIVPQFGSPNM 58 (192)
T ss_dssp --------------------------CC--CEEECCCEECTTSTTE
T ss_pred ccCcchhhhhhhhHHHHHHhhhhhhcCc--eeeeEEEeeccCCCcc
Confidence 4555556899999999997555544557 8999988774 78876
No 241
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=24.70 E-value=30 Score=39.54 Aligned_cols=79 Identities=11% Similarity=0.034 Sum_probs=45.2
Q ss_pred cccccccccccCchH-----HHHHHcCCCC------CccchhhhHHhhhcCCCcccccc--ccccceeeeeecch-----
Q psy11047 383 KGLGFYKMKLQTNFP-----NFILSYFPKF------QSVRLAQKFEALVLGDPRFEIPA--ARHLGMVVIRLLGE----- 444 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR-----~iar~~Gl~~------~~l~lwLHVDAA~GG~~afeLp~--~~~Lg~VcFR~~~~----- 444 (943)
.|+++|+++++|+|+ ...+.+|.++ +..++.-++-..+...+.|++.. ++.++.||||+...
T Consensus 357 ~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~ 436 (511)
T 3vp6_A 357 YDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGV 436 (511)
T ss_dssp GCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSC
T ss_pred cCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccccc
Confidence 456788999999988 2223343322 22222333333344444577776 68899999998421
Q ss_pred ----------hhhHHHHHHHhhccCcc
Q psy11047 445 ----------NILTEKLLKRLNSKGRL 461 (943)
Q Consensus 445 ----------ne~n~kll~~l~~~G~~ 461 (943)
+..++++.+++.+.|.+
T Consensus 437 ~~~~~~~~~l~~~~~~l~~~L~~~G~~ 463 (511)
T 3vp6_A 437 PDSPQRREKLHKVAPKIKALMMESGTT 463 (511)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCE
Confidence 12344566666666654
No 242
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=20.69 E-value=45 Score=37.57 Aligned_cols=81 Identities=11% Similarity=0.029 Sum_probs=45.1
Q ss_pred cccccccccccCchHH-----HHHHcCCCC------CccchhhhHHhhhcCCCcccccc--ccccceeeeeecch-----
Q psy11047 383 KGLGFYKMKLQTNFPN-----FILSYFPKF------QSVRLAQKFEALVLGDPRFEIPA--ARHLGMVVIRLLGE----- 444 (943)
Q Consensus 383 ~d~~~~~i~L~RrfR~-----iar~~Gl~~------~~l~lwLHVDAA~GG~~afeLp~--~~~Lg~VcFR~~~~----- 444 (943)
.|+++|+++.+|||+. +.+.+|.++ +..++.-++-..+...+.|++.. ++.++.+||++.+.
T Consensus 354 ~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~ 433 (504)
T 2okj_A 354 YDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGV 433 (504)
T ss_dssp GCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSC
T ss_pred CCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccccc
Confidence 4677888899999971 123333211 11122222223333333466665 57889999998431
Q ss_pred ----------hhhHHHHHHHhhccCcccc
Q psy11047 445 ----------NILTEKLLKRLNSKGRLHC 463 (943)
Q Consensus 445 ----------ne~n~kll~~l~~~G~~~~ 463 (943)
++.+.++.+++.+.|.+++
T Consensus 434 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~ 462 (504)
T 2okj_A 434 PDSPQRREKLHKVAPKIKALMMESGTTMV 462 (504)
T ss_dssp CCCHHHHHHHTTHHHHHHHHHHHHTSCEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHhCCcEEE
Confidence 2235667777777775543
Done!