Query psy11059
Match_columns 429
No_of_seqs 331 out of 2310
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 17:01:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbr_A Lectin, myxobacterial h 99.9 1.7E-26 5.9E-31 211.5 -19.8 228 28-329 8-265 (267)
2 2vj3_A Neurogenic locus notch 99.9 9E-22 3.1E-26 165.4 10.3 125 7-196 3-127 (135)
3 2vj3_A Neurogenic locus notch 99.8 2.6E-21 9E-26 162.5 10.4 121 290-429 4-125 (135)
4 4fbr_A Lectin, myxobacterial h 99.8 5.9E-24 2E-28 194.7 -16.9 196 16-260 37-265 (267)
5 1z1y_A Ookinete surface protei 99.8 3.1E-20 1.1E-24 164.8 0.8 133 271-424 22-176 (186)
6 1z1y_A Ookinete surface protei 99.8 1.4E-19 4.8E-24 160.6 2.2 139 15-187 9-175 (186)
7 4d90_A EGF-like repeat and dis 99.7 4.7E-18 1.6E-22 144.1 10.7 126 293-425 2-135 (143)
8 2ygq_A WIF-1, WNT inhibitory f 99.7 5.1E-18 1.7E-22 162.9 7.8 157 8-264 147-308 (324)
9 2vj2_A Jagged-1; signalling, p 99.7 2.9E-18 1E-22 149.4 5.0 144 245-423 13-169 (169)
10 2ygq_A WIF-1, WNT inhibitory f 99.7 1.1E-17 3.6E-22 160.7 7.9 152 233-426 153-311 (324)
11 4d90_A EGF-like repeat and dis 99.7 3.1E-17 1.1E-21 139.0 9.8 114 10-187 1-133 (143)
12 2vj2_A Jagged-1; signalling, p 99.6 4E-16 1.4E-20 135.9 5.1 149 28-263 12-168 (169)
13 1tpg_A T-plasminogen activator 99.6 2.6E-15 8.8E-20 116.5 6.0 82 336-427 6-90 (91)
14 3fcs_B Integrin beta-3; beta p 99.6 7.1E-15 2.4E-19 153.2 10.9 115 11-150 436-583 (690)
15 1yo8_A Thrombospondin-2; EGF, 99.5 4.9E-15 1.7E-19 152.2 8.4 122 290-429 2-154 (634)
16 2bou_A EGF-like module contain 99.5 5.6E-15 1.9E-19 125.0 5.7 117 298-429 7-143 (143)
17 1yo8_A Thrombospondin-2; EGF, 99.5 1.1E-14 3.8E-19 149.6 9.0 141 8-199 2-161 (634)
18 4aqs_A Laminin subunit beta-1; 99.5 8.2E-15 2.8E-19 150.4 6.5 117 248-384 406-524 (525)
19 3fcs_B Integrin beta-3; beta p 99.5 3.5E-14 1.2E-18 148.0 10.9 154 234-423 441-628 (690)
20 1uzk_A Fibrillin-1; glycoprote 99.5 1.4E-15 4.7E-20 131.6 -1.1 135 8-184 2-156 (162)
21 2bou_A EGF-like module contain 99.5 3.7E-14 1.3E-18 119.9 5.2 123 16-185 6-132 (143)
22 2gy5_A Angiopoietin-1 receptor 99.4 2.1E-13 7E-18 135.4 10.0 118 234-386 204-321 (423)
23 4aqs_A Laminin subunit beta-1; 99.4 1.4E-13 4.9E-18 141.1 7.6 218 176-423 283-525 (525)
24 2gy5_A Angiopoietin-1 receptor 99.4 2E-13 6.9E-18 135.4 8.4 130 274-425 185-322 (423)
25 1dx5_I Thrombomodulin; serine 99.4 1.1E-13 3.8E-18 112.8 1.7 104 290-419 3-111 (118)
26 1dx5_I Thrombomodulin; serine 99.4 9.7E-14 3.3E-18 113.2 1.0 107 6-183 1-111 (118)
27 1tpg_A T-plasminogen activator 99.3 6.8E-13 2.3E-17 102.8 5.1 87 273-389 1-90 (91)
28 1emn_A Fibrillin; extracellula 99.3 7.7E-13 2.6E-17 100.4 5.2 72 7-97 3-74 (82)
29 2w86_A Fibrillin-1, fibrillin1 99.3 5.4E-14 1.8E-18 119.5 -2.4 118 289-420 2-141 (147)
30 1z6c_A Vitamin K-dependent pro 99.3 1.1E-12 3.9E-17 100.7 4.3 77 348-429 2-84 (87)
31 2w86_A Fibrillin-1, fibrillin1 99.3 9.5E-14 3.2E-18 118.0 -4.2 125 7-184 2-141 (147)
32 1emn_A Fibrillin; extracellula 99.2 5.1E-12 1.8E-16 95.8 5.0 70 348-420 4-77 (82)
33 1uzk_A Fibrillin-1; glycoprote 99.2 1.1E-12 3.8E-17 113.2 -0.1 113 290-420 2-156 (162)
34 1aut_L Activated protein C; se 99.2 1.1E-11 3.7E-16 100.3 5.5 72 7-97 4-84 (114)
35 3k6s_B Integrin beta-2; cell r 99.2 1.1E-11 3.9E-16 128.7 6.6 138 233-402 435-607 (687)
36 3k6s_B Integrin beta-2; cell r 99.2 7.2E-12 2.5E-16 130.2 4.8 143 15-205 433-607 (687)
37 2c4f_L Coagulation factor VII 99.2 1E-11 3.4E-16 104.7 4.3 75 3-97 41-119 (142)
38 1lmj_A Fibrillin 1; EGF, calci 99.2 5.2E-12 1.8E-16 96.8 1.9 75 8-97 2-77 (86)
39 1klo_A Laminin; glycoprotein; 99.2 1.3E-11 4.5E-16 106.2 4.2 126 234-384 2-145 (162)
40 1lmj_A Fibrillin 1; EGF, calci 99.2 1.1E-11 3.8E-16 94.9 3.1 69 348-419 2-79 (86)
41 1x7a_L Coagulation factor IX, 99.1 1.5E-11 5E-16 104.0 3.8 74 2-97 41-116 (146)
42 2c4f_L Coagulation factor VII 99.1 1.4E-11 4.8E-16 103.8 3.5 77 348-424 46-130 (142)
43 1x7a_L Coagulation factor IX, 99.1 1.4E-11 4.8E-16 104.1 3.3 76 344-423 44-126 (146)
44 1nfu_B Coagulation factor XA, 99.1 6E-12 2.1E-16 110.9 0.9 75 2-97 35-111 (195)
45 1z6c_A Vitamin K-dependent pro 99.1 2.8E-11 9.6E-16 92.9 2.9 72 8-97 2-75 (87)
46 2vh0_B Activated factor XA lig 99.1 1.3E-11 4.5E-16 102.8 0.3 75 2-97 35-111 (134)
47 1nfu_B Coagulation factor XA, 99.1 2.3E-11 7.8E-16 107.2 1.1 76 348-425 41-123 (195)
48 1aut_L Activated protein C; se 99.0 8.1E-11 2.8E-15 95.2 3.9 73 348-422 5-93 (114)
49 2vh0_B Activated factor XA lig 99.0 3.6E-11 1.2E-15 100.2 0.7 74 348-423 41-121 (134)
50 2w2n_E LDL receptor, low-densi 99.0 6.5E-11 2.2E-15 94.4 1.7 77 2-97 22-98 (107)
51 2w2n_E LDL receptor, low-densi 99.0 1.6E-10 5.4E-15 92.1 2.4 75 338-419 20-100 (107)
52 3h5c_B Vitamin K-dependent pro 98.9 9.3E-10 3.2E-14 105.4 6.7 78 348-428 4-88 (317)
53 3h5c_B Vitamin K-dependent pro 98.9 9.1E-10 3.1E-14 105.5 6.5 69 8-97 4-74 (317)
54 3u7u_G Neuregulin 1; signaling 98.9 8.1E-10 2.8E-14 76.0 3.3 48 380-427 1-53 (55)
55 1klo_A Laminin; glycoprotein; 98.8 2.5E-09 8.5E-14 91.9 5.6 76 247-345 73-156 (162)
56 3u7u_G Neuregulin 1; signaling 98.7 6.3E-09 2.1E-13 71.5 3.1 47 342-388 1-52 (55)
57 2p28_B Integrin beta-2; hybrid 98.6 1.4E-08 4.8E-13 91.0 3.8 104 298-424 96-215 (217)
58 1edm_B Factor IX; epidermal gr 98.6 2.8E-08 9.6E-13 63.6 3.8 37 8-59 2-38 (39)
59 1edm_B Factor IX; epidermal gr 98.6 6.6E-08 2.2E-12 61.8 4.4 37 386-422 2-38 (39)
60 2p28_B Integrin beta-2; hybrid 98.5 4.1E-08 1.4E-12 88.0 4.2 92 16-131 95-214 (217)
61 3p5b_L Low density lipoprotein 98.4 1.2E-07 4.2E-12 93.6 4.3 69 10-97 1-69 (400)
62 1n7d_A LDL receptor, low-densi 98.4 7.1E-07 2.4E-11 94.5 10.2 81 335-418 280-364 (699)
63 1egf_A Epidermal growth factor 98.4 3.4E-07 1.2E-11 62.7 4.9 42 386-427 2-48 (53)
64 1a3p_A Epidermal growth factor 98.4 2.5E-07 8.6E-12 61.0 3.7 39 389-427 2-45 (45)
65 3p5b_L Low density lipoprotein 98.3 3E-07 1E-11 90.8 4.2 67 350-419 1-71 (400)
66 3v65_B Low-density lipoprotein 98.3 1.3E-07 4.3E-12 93.1 0.7 72 348-422 2-82 (386)
67 3v65_B Low-density lipoprotein 98.3 1.4E-07 4.7E-12 92.8 1.0 72 8-97 2-73 (386)
68 1n7d_A LDL receptor, low-densi 98.3 2.3E-06 7.8E-11 90.6 10.5 157 11-218 175-361 (699)
69 1a3p_A Epidermal growth factor 98.3 5.8E-07 2E-11 59.3 3.7 40 10-63 1-44 (45)
70 1egf_A Epidermal growth factor 98.3 6.4E-07 2.2E-11 61.3 4.1 42 8-63 2-47 (53)
71 1hae_A Heregulin-alpha; growth 98.2 2.8E-07 9.5E-12 65.6 1.5 41 388-428 7-52 (63)
72 3m0c_C LDL receptor, low-densi 98.2 1.3E-06 4.5E-11 93.3 7.2 68 348-418 311-382 (791)
73 1hae_A Heregulin-alpha; growth 98.2 2.8E-07 9.5E-12 65.6 1.0 43 9-68 6-53 (63)
74 1k36_A Epiregulin; EGF-like fo 98.1 1E-06 3.5E-11 58.2 2.8 38 8-61 2-44 (46)
75 3m0c_C LDL receptor, low-densi 98.1 3.3E-06 1.1E-10 90.3 7.6 99 261-380 280-382 (791)
76 2wg3_C Hedgehog-interacting pr 98.1 4.5E-07 1.6E-11 91.0 0.3 78 334-424 379-456 (463)
77 1k36_A Epiregulin; EGF-like fo 98.1 1.9E-06 6.5E-11 56.9 2.9 38 386-424 2-44 (46)
78 2k2s_B Micronemal protein 6; m 98.1 5.3E-07 1.8E-11 63.3 0.1 37 348-384 10-49 (61)
79 2k2s_B Micronemal protein 6; m 98.0 1.2E-06 4.1E-11 61.5 0.9 39 3-44 5-46 (61)
80 3ca7_A Protein spitz; argos, E 97.9 5.5E-07 1.9E-11 61.3 -1.8 42 371-424 4-49 (52)
81 1nql_B Epidermal growth factor 97.6 2.5E-05 8.5E-10 53.2 2.3 36 15-62 10-46 (53)
82 2kl7_A Fibulin-4; secreted, ca 97.6 4.4E-05 1.5E-09 55.4 3.4 36 8-44 2-38 (71)
83 1nql_B Epidermal growth factor 97.6 2E-05 6.8E-10 53.6 1.4 34 392-425 11-46 (53)
84 3zyj_B Netrin-G1; cell adhesio 97.5 3.4E-05 1.2E-09 75.2 3.3 48 355-414 371-418 (426)
85 2wg3_C Hedgehog-interacting pr 97.5 1.1E-05 3.8E-10 80.9 -0.4 73 34-131 378-455 (463)
86 2jkh_L Factor X light chain; p 97.4 3.8E-05 1.3E-09 52.7 1.5 46 9-68 1-46 (55)
87 1ob1_C Major merozoite surface 97.4 0.00016 5.6E-09 55.0 4.7 72 15-97 8-83 (99)
88 3zyj_B Netrin-G1; cell adhesio 97.4 3E-05 1E-09 75.7 0.8 109 18-151 298-410 (426)
89 3ca7_A Protein spitz; argos, E 97.4 3.5E-05 1.2E-09 52.3 0.6 32 16-60 13-48 (52)
90 1gl4_A Nidogen-1, entactin; im 97.4 2.1E-05 7.2E-10 72.4 -0.8 45 7-63 3-47 (285)
91 1n1i_A Merozoite surface prote 97.3 0.00044 1.5E-08 52.9 5.8 78 3-97 4-84 (105)
92 1apq_A Complement protease C1R 97.3 0.00017 5.9E-09 48.9 3.2 34 7-43 2-43 (53)
93 1kli_L Factor VIIA; extrinsic 97.1 0.00019 6.4E-09 51.7 2.1 49 6-68 2-51 (69)
94 2fd6_A Urokinase-type plasmino 97.0 0.0005 1.7E-08 55.5 3.8 59 356-423 2-63 (122)
95 1g1s_A P-selectin; selectin, l 96.8 0.00029 9.9E-09 59.9 1.4 41 388-429 120-160 (162)
96 4aqt_A Laminin subunit gamma-1 96.8 0.0019 6.6E-08 62.3 6.7 95 235-345 257-360 (375)
97 2fd6_A Urokinase-type plasmino 96.7 0.00092 3.1E-08 54.0 3.5 33 18-63 2-37 (122)
98 3ltf_D Protein spitz; receptor 96.7 0.00043 1.5E-08 47.9 1.0 30 394-423 15-48 (58)
99 1apq_A Complement protease C1R 96.5 0.0014 4.7E-08 44.3 2.8 32 385-418 2-43 (53)
100 3ltf_D Protein spitz; receptor 96.5 0.00079 2.7E-08 46.5 1.5 31 18-60 15-48 (58)
101 1q4g_A Prostaglandin G/H synth 96.4 0.00091 3.1E-08 68.2 2.0 39 9-62 2-42 (553)
102 1g1s_A P-selectin; selectin, l 96.4 0.00079 2.7E-08 57.1 1.1 37 16-68 124-160 (162)
103 2jkh_L Factor X light chain; p 96.4 0.0011 3.6E-08 45.4 1.4 38 350-390 2-45 (55)
104 2y38_A Laminin subunit alpha-5 96.3 0.0061 2.1E-07 59.2 7.1 82 248-345 285-383 (403)
105 1kig_L Factor XA; glycoprotein 96.3 0.00088 3E-08 45.0 0.8 38 14-63 3-40 (51)
106 3nt1_A Prostaglandin-endoperox 96.3 0.0013 4.6E-08 67.1 2.4 38 9-61 1-40 (587)
107 2kl7_A Fibulin-4; secreted, ca 96.3 0.0023 7.7E-08 46.2 2.9 33 61-97 2-36 (71)
108 1ob1_C Major merozoite surface 95.9 0.0078 2.7E-07 45.8 4.3 70 293-379 6-83 (99)
109 2bz6_L Blood coagulation facto 95.8 0.003 1E-07 42.7 1.3 43 12-68 2-45 (53)
110 1kli_L Factor VIIA; extrinsic 95.7 0.0038 1.3E-07 44.7 1.8 41 347-390 3-50 (69)
111 2wph_E Coagulation factor IXA 95.5 0.0072 2.5E-07 41.8 2.5 40 12-63 2-42 (59)
112 1g1t_A E-selectin; EGF, adhesi 95.2 0.004 1.4E-07 52.3 0.6 38 388-425 120-157 (157)
113 1gl4_A Nidogen-1, entactin; im 95.1 0.0042 1.4E-07 57.1 0.3 42 347-389 3-48 (285)
114 2i9a_A Urokinase-type plasmino 95.1 0.014 4.8E-07 48.4 3.4 58 356-422 14-74 (145)
115 1q4g_A Prostaglandin G/H synth 95.0 0.0072 2.5E-07 61.5 1.9 37 349-385 2-40 (553)
116 1xdt_R Hbegf, heparin-binding 95.0 0.008 2.7E-07 43.8 1.5 32 392-424 45-78 (79)
117 3cfw_A L-selectin; EGF, cell a 94.9 0.012 4.1E-07 49.8 2.7 38 390-428 122-159 (164)
118 1iox_A Betacellulin; EGF-like 94.9 0.01 3.4E-07 39.5 1.6 31 393-424 14-46 (50)
119 2i9a_A Urokinase-type plasmino 94.8 0.017 5.7E-07 47.9 3.3 33 18-63 14-49 (145)
120 2rnl_A Amphiregulin; AR, color 94.8 0.03 1E-06 37.1 3.8 30 393-423 18-49 (50)
121 3e50_C Protransforming growth 94.5 0.03 1E-06 37.1 3.3 31 233-264 14-45 (50)
122 3cfw_A L-selectin; EGF, cell a 94.5 0.018 6.3E-07 48.6 2.8 37 16-68 124-160 (164)
123 1xdt_R Hbegf, heparin-binding 94.5 0.012 4.3E-07 42.8 1.4 40 8-60 36-77 (79)
124 1n1i_A Merozoite surface prote 94.5 0.058 2E-06 41.3 5.1 71 351-422 12-94 (105)
125 4aqt_A Laminin subunit gamma-1 94.5 0.016 5.5E-07 55.9 2.7 30 314-345 268-297 (375)
126 2rnl_A Amphiregulin; AR, color 94.4 0.04 1.4E-06 36.5 3.7 31 233-264 18-49 (50)
127 3nt1_A Prostaglandin-endoperox 94.3 0.017 5.8E-07 59.0 2.5 37 349-385 1-39 (587)
128 1kig_L Factor XA; glycoprotein 94.3 0.011 3.7E-07 39.5 0.7 28 362-390 11-42 (51)
129 2bz6_L Blood coagulation facto 93.7 0.021 7.3E-07 38.4 1.4 17 362-378 12-29 (53)
130 1iox_A Betacellulin; EGF-like 93.5 0.042 1.5E-06 36.4 2.5 38 10-60 6-45 (50)
131 1g1t_A E-selectin; EGF, adhesi 93.4 0.021 7E-07 47.8 1.0 38 350-387 120-157 (157)
132 3e50_C Protransforming growth 93.1 0.067 2.3E-06 35.4 2.9 33 15-60 12-45 (50)
133 3asi_A Neurexin-1-alpha; beta- 92.6 0.064 2.2E-06 52.5 3.5 38 9-61 185-223 (410)
134 3asi_A Neurexin-1-alpha; beta- 92.3 0.086 2.9E-06 51.6 3.9 38 387-424 185-223 (410)
135 1szb_A Mannose binding lectin- 92.1 0.032 1.1E-06 47.5 0.4 45 376-422 113-166 (170)
136 2ygo_A WIF-1, WNT inhibitory f 91.4 0.16 5.5E-06 43.4 4.0 28 233-264 153-180 (188)
137 1szb_A Mannose binding lectin- 91.3 0.045 1.6E-06 46.5 0.5 44 338-383 113-165 (170)
138 2ygo_A WIF-1, WNT inhibitory f 90.9 0.16 5.5E-06 43.4 3.5 32 389-424 150-181 (188)
139 3qcw_A Neurexin-1-alpha; synap 89.6 0.2 6.9E-06 56.3 4.0 45 383-427 1013-1058(1245)
140 2y38_A Laminin subunit alpha-5 89.2 0.46 1.6E-05 46.0 5.6 66 317-384 285-372 (403)
141 3qcw_A Neurexin-1-alpha; synap 88.0 0.27 9.3E-06 55.2 3.6 39 9-62 1017-1056(1245)
142 2p26_A Integrin beta-2; hybrid 86.6 0.34 1.1E-05 44.6 2.7 59 357-423 198-275 (280)
143 3f1s_B Vitamin K-dependent pro 86.4 0.3 1E-05 45.0 2.4 44 8-63 1-45 (283)
144 1b9w_A Protein (merozoite surf 85.1 1.5 5.2E-05 32.6 5.0 73 11-97 6-79 (95)
145 3v64_C Agrin; beta propeller, 84.1 0.38 1.3E-05 45.7 2.0 39 9-59 1-39 (349)
146 3fby_A COMP, cartilage oligome 83.9 0.7 2.4E-05 46.1 3.7 45 9-63 18-63 (551)
147 2wph_E Coagulation factor IXA 83.5 0.44 1.5E-05 32.6 1.6 23 71-97 7-30 (59)
148 2p26_A Integrin beta-2; hybrid 79.4 0.65 2.2E-05 42.7 1.6 57 18-97 197-263 (280)
149 2e26_A Reelin, reeler protein; 78.5 0.37 1.3E-05 49.8 -0.4 44 335-384 521-564 (725)
150 1nzi_A Complement C1S componen 77.9 0.65 2.2E-05 38.5 1.0 36 385-422 115-157 (159)
151 1nzi_A Complement C1S componen 72.6 0.97 3.3E-05 37.5 0.7 37 55-97 110-148 (159)
152 3v64_C Agrin; beta propeller, 70.9 1.5 5.3E-05 41.4 1.8 28 66-97 3-30 (349)
153 2ddu_A Reelin; beta-jelly-roll 54.7 2.8 9.4E-05 40.1 0.2 26 11-44 193-218 (387)
154 3f1s_B Vitamin K-dependent pro 52.0 6.2 0.00021 36.0 2.1 28 66-97 4-33 (283)
155 2e26_A Reelin, reeler protein; 51.7 4.3 0.00015 42.0 1.1 32 10-61 535-566 (725)
156 3fl7_A Ephrin receptor; ATP-bi 50.6 6 0.00021 39.9 2.0 66 19-97 252-319 (536)
157 3t5o_A Complement component C6 49.6 6.4 0.00022 42.5 2.1 37 10-61 498-534 (913)
158 3fl7_A Ephrin receptor; ATP-bi 47.9 13 0.00045 37.3 4.0 58 316-380 261-320 (536)
159 4a0p_A LRP6, LRP-6, low-densit 47.3 7.9 0.00027 39.8 2.3 32 8-42 264-296 (628)
160 3sov_A LRP-6, low-density lipo 47.1 12 0.00041 34.7 3.3 27 24-59 280-308 (318)
161 3fby_A COMP, cartilage oligome 43.9 12 0.00042 37.3 2.8 28 233-260 27-54 (551)
162 3t5o_A Complement component C6 36.0 29 0.00098 37.4 4.5 39 349-387 497-535 (913)
163 1b9w_A Protein (merozoite surf 29.2 1.7E+02 0.0058 21.7 6.2 62 193-256 7-77 (95)
164 1lr7_A Follistatin, FS1; hepar 27.9 50 0.0017 23.1 3.3 28 10-39 2-29 (74)
165 1ijq_A LDL receptor, low-densi 20.1 66 0.0022 29.3 3.3 24 72-97 279-306 (316)
No 1
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.86 E-value=1.7e-26 Score=211.47 Aligned_cols=228 Identities=14% Similarity=0.081 Sum_probs=176.3
Q ss_pred CCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCeeeeCCCCCc------ccCC
Q psy11059 28 DETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYECVCPPGYK------EIRD 101 (429)
Q Consensus 28 ~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy~------~~~~ 101 (429)
+..|++++.+.+|.. .+.|.+++..+. ++. .+|.++|+|+ +..++|+|.|++||+ ++++
T Consensus 8 n~~Gg~s~~~~pgg~---------~~~g~~~~~n~~--~~~--~~c~ngG~C~--~g~~~y~C~Cp~Gf~G~~Ce~ni~e 72 (267)
T 4fbr_A 8 NQWGGSQATWNPGGL---------WLIGARDKQNVV--ALD--IKSDDGGKTL--KGTMTYNGEGPIGFRGTLSSANNYT 72 (267)
T ss_dssp EECSSTTSCCEEEEE---------EECCCCSSCCEE--EEE--EECSSTTSEE--EEEEEETTSCCEEEEEEECSTTEEE
T ss_pred ecCCcccCCcCCCCc---------eeeccccccccc--cCC--CCcCCCCeec--CCCCCeEEeCCCCcccccccccccc
Confidence 677888898988832 122888887765 444 4889999999 999999999999998 5666
Q ss_pred ------CCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCCCCCCCCCeEeeCCCCccccCCCCCCCCCCCCCCCce
Q psy11059 102 ------CTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYCELPEIGDCSSNPCLNDGV 175 (429)
Q Consensus 102 ------C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~~~C~~~g~C~~~~~g~~C~~~~~~~C~~~~C~~~~~ 175 (429)
|.+.||+++++| |.|.+|+ .+++|.++||.++|+|++...+|.|+
T Consensus 73 c~~~~~c~s~pC~nggtc----------~~G~~c~--~~~eC~s~pC~ngG~C~~~~~sy~C~----------------- 123 (267)
T 4fbr_A 73 VENQWGGTSAPWQPGGVW----------VLGARDK--QNIVAVSIKSNDGGKTLTGTTTYNGE----------------- 123 (267)
T ss_dssp EEEESSSTTSCEEEEEEE----------ECCCCSS--CCEEEEEEECSSTTSEEEEEEEETTS-----------------
T ss_pred cccccCcCCCcccCCCee----------eccCccc--cccccCCCCCCCCCEEecCCccEEee-----------------
Confidence 778888888777 5689998 56799999999999999999999999
Q ss_pred ecCCcccCCcccCCCCC------CCCCCCCCCCEEeeCCCCeeeccCCCCCCCCCCCCCCCCCCCCCCCcEeccCCCCCe
Q psy11059 176 CVDVYKGRYWELPEIRD------CTSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVNPCQNGGKCNEDETGNY 249 (429)
Q Consensus 176 C~~~~~G~~c~~~~~~~------C~~~~C~~~~~C~~~~~~~C~C~~~g~~~C~~~~C~~~~c~~C~~~g~C~~~~~~~~ 249 (429)
|+.+|+|..|+. ++++ |.+.||.+.++|++....+ ..+ .|.. .+|.++|+| .+...+|
T Consensus 124 C~~Gf~G~~Ce~-~~d~C~n~~~c~s~pC~ngg~c~~G~~c~-----~~i-~c~~--------~~c~ngg~C-~dg~~~y 187 (267)
T 4fbr_A 124 GPIGFKSEVTDG-DTYSVENQWGGSAAPWHSGGVWVLGTRGK-----QNV-INVD--------AKSNDGGKT-LSGTMTY 187 (267)
T ss_dssp CCEEEEEEECCC-CEEEEEEECSSTTSCCEEEEEEECCSSTT-----SCE-EEEE--------EECSSTTSE-EEEEEEE
T ss_pred CCCCccccCCCC-CcccccccCCcCCccccCCcceecccccc-----ccc-ccCC--------CCCCCCCEe-eCCCCCe
Confidence 999999999998 8888 6677888888887644222 111 1222 369999999 7788899
Q ss_pred eEeCCCCCcCCCCCCCc--ccc----------CCCCeeeeCCCCCCCCCCccCCCCCCCCCCCCCCCeeCCccccCCCCC
Q psy11059 250 DCTCDALHTGDPCKHGS--CVD----------KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR 317 (429)
Q Consensus 250 ~C~C~~g~~G~~C~~~~--C~~----------~~~~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~C~~~~~~~~~~~ 317 (429)
+|.|++||+|..|+..+ |.+ ..+.+++.|..++.+..++ .+|.++++| ++ ...+
T Consensus 188 ~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~---------~~c~ngGtC----~d-g~~s 253 (267)
T 4fbr_A 188 NGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALN---------VASSDGGKT----LA-GTMI 253 (267)
T ss_dssp TTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEE---------EECSSTTSE----EE-EEEE
T ss_pred EEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCC---------cCCCCCCEe----eC-CCcc
Confidence 99999999999887543 111 1234556677777555442 467889999 55 6678
Q ss_pred eeeeCCCCccCC
Q psy11059 318 FNCTCPSGYHGK 329 (429)
Q Consensus 318 ~~C~C~~G~~G~ 329 (429)
|+|.|++||+|+
T Consensus 254 y~CeCp~GF~G~ 265 (267)
T 4fbr_A 254 YNGEGPIGFRAR 265 (267)
T ss_dssp ETTSCCEEEEEE
T ss_pred eeecCCCCcccc
Confidence 999999999875
No 2
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.86 E-value=9e-22 Score=165.37 Aligned_cols=125 Identities=32% Similarity=0.812 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCC
Q psy11059 7 SLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQ 86 (429)
Q Consensus 7 ~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~ 86 (429)
.++|||++.++||+++|+|+ +..++|+|+|++||+ |..|+++++ +|. .++|.++++|+ +..+
T Consensus 3 ~dideC~~~~~~C~~~g~C~-~~~g~~~C~C~~Gy~------------G~~C~~~~~--~C~-~~~C~~~~~C~--~~~g 64 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCI-NTLGSFECQCLQGYT------------GPRCEIDVN--ECV-SNPCQNDATCL--DQIG 64 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEE-ECSSSEEEECCTTEE------------STTSCEECC--TTT-TCCCCSSCEEE--ECSS
T ss_pred cccccccCCCCCCCCCCEeE-CCCCCEEEECCCCCc------------CCcccccCc--cCC-CCCCCCCCEEe--CCCC
Confidence 47899966689999999999 999999999999999 999998888 999 89999999999 8889
Q ss_pred CeeeeCCCCCcccCCCCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCCCCCCCCCeEeeCCCCccccCCCCCCCC
Q psy11059 87 LYECVCPPGYKEIRDCTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYCELPEIGDCS 166 (429)
Q Consensus 87 ~~~C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~~~C~~~g~C~~~~~g~~C~~~~~~~C~ 166 (429)
+|+|+|++| |+|..|+. ++++|..++|.++++|++..+++.|.
T Consensus 65 ~~~C~C~~G----------------------------~~G~~C~~-~~~~C~~~~C~~~g~C~~~~g~~~C~-------- 107 (135)
T 2vj3_A 65 EFQCICMPG----------------------------YEGVHCEV-NTDECASSPCLHNGRCLDKINEFQCE-------- 107 (135)
T ss_dssp CEEEECCTT----------------------------EESSSSCE-ECCTTTTCCSTTTCEEEECSSCEEEE--------
T ss_pred CceeeCCCC----------------------------CcCCccee-cCCcccCCCcCCCCEeECCCCCeEEE--------
Confidence 999999888 55666765 67788878888888888887778887
Q ss_pred CCCCCCCceecCCcccCCcccCCCCCCCCC
Q psy11059 167 SNPCLNDGVCVDVYKGRYWELPEIRDCTSN 196 (429)
Q Consensus 167 ~~~C~~~~~C~~~~~G~~c~~~~~~~C~~~ 196 (429)
|..||+|..|+. +|++|...
T Consensus 108 ---------C~~G~~G~~C~~-~i~~C~~~ 127 (135)
T 2vj3_A 108 ---------CPTGFTGHLCQV-DLHHILDA 127 (135)
T ss_dssp ---------CCTTEESSSSCE-ECC-----
T ss_pred ---------CCCCCcCCccCc-cCccccCC
Confidence 788888888877 77887654
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.85 E-value=2.6e-21 Score=162.49 Aligned_cols=121 Identities=42% Similarity=1.116 Sum_probs=106.4
Q ss_pred CCCCCCC-CCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccCCC
Q psy11059 290 ELTGCVG-PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKIN 368 (429)
Q Consensus 290 ~~~~C~~-~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g 368 (429)
++++|.. ..+|.++++| ++ ..++|.|.|++||+|..| +.++++|...||.++++|++..+
T Consensus 4 dideC~~~~~~C~~~g~C----~~-~~g~~~C~C~~Gy~G~~C--------------~~~~~~C~~~~C~~~~~C~~~~g 64 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKC----IN-TLGSFECQCLQGYTGPRC--------------EIDVNECVSNPCQNDATCLDQIG 64 (135)
T ss_dssp CCCTTTSSSCSSSTTCEE----EE-CSSSEEEECCTTEESTTS--------------CEECCTTTTCCCCSSCEEEECSS
T ss_pred ccccccCCCCCCCCCCEe----EC-CCCCEEEECCCCCcCCcc--------------cccCccCCCCCCCCCCEEeCCCC
Confidence 5677873 3789999999 55 778899999998876654 45789999999999999999999
Q ss_pred ceEEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCCCCCC
Q psy11059 369 GYTCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNIDDCE 429 (429)
Q Consensus 369 ~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i~~C~ 429 (429)
+|+|.|++||+|..|++++++|...+|.++++|+++.++|+|.|++||+|..|+++|++|+
T Consensus 65 ~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~ 125 (135)
T 2vj3_A 65 EFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHIL 125 (135)
T ss_dssp CEEEECCTTEESSSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC---
T ss_pred CceeeCCCCCcCCcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCcccc
Confidence 9999999999999998889999999999999999999999999999999999999999984
No 4
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.80 E-value=5.9e-24 Score=194.67 Aligned_cols=196 Identities=14% Similarity=0.016 Sum_probs=116.2
Q ss_pred CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCC------CCCCCCCCCCCeEeeCCCCCCee
Q psy11059 16 RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQI------CTTAPPCLNGATCRPQLTEQLYE 89 (429)
Q Consensus 16 ~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~------C~~~~~C~~~g~C~~~~~~~~~~ 89 (429)
..+|.++|+|+ +..++|+|+|++||+ |.+|+++++ + |. +.||+++++|+ . ...
T Consensus 37 ~~~c~ngG~C~-~g~~~y~C~Cp~Gf~------------G~~Ce~ni~--ec~~~~~c~-s~pC~nggtc~--~---G~~ 95 (267)
T 4fbr_A 37 DIKSDDGGKTL-KGTMTYNGEGPIGFR------------GTLSSANNY--TVENQWGGT-SAPWQPGGVWV--L---GAR 95 (267)
T ss_dssp EEECSSTTSEE-EEEEEETTSCCEEEE------------EEECSTTEE--EEEEESSST-TSCEEEEEEEE--C---CCC
T ss_pred CCCcCCCCeec-CCCCCeEEeCCCCcc------------ccccccccc--ccccccCcC-CCcccCCCeee--c---cCc
Confidence 34899999999 999999999999999 666665555 4 44 55555555554 1 111
Q ss_pred eeCCCCCcccCCCCCCCCCCCCeEecCCC---ce-eCCeeccCCCCCCCCC------CCCCCCCCCCeEeeCCCCccccC
Q psy11059 90 CVCPPGYKEIRDCTSNPCLNDGVCVWMFD---VT-IQVYKGRYCELPEIGD------CSSNPCLNDGVCVDVYKGRYCEL 159 (429)
Q Consensus 90 C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~---C~-~~g~~G~~C~~~~i~~------C~~~~C~~~g~C~~~~~g~~C~~ 159 (429)
|. ..++|++.||.++|+|++... |. ++||+|.+|+. +|++ |.+.||.++++|+. |..|+.
T Consensus 96 c~------~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~-~~d~C~n~~~c~s~pC~ngg~c~~---G~~c~~ 165 (267)
T 4fbr_A 96 DK------QNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDG-DTYSVENQWGGSAAPWHSGGVWVL---GTRGKQ 165 (267)
T ss_dssp SS------CCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCC-CEEEEEEECSSTTSCCEEEEEEEC---CSSTTS
T ss_pred cc------cccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCC-CcccccccCCcCCccccCCcceec---cccccc
Confidence 11 223555555666666655443 55 56666666655 5555 34445555555543 333442
Q ss_pred CCCCCCCCCCCCCCce-----------ecCCcccCCcccCCCCCCC------CCCCCCCCEEeeCCCCeeeccCCCCCCC
Q psy11059 160 PEIGDCSSNPCLNDGV-----------CVDVYKGRYWELPEIRDCT------SNPCLNDGVCVDEVYKGRYWELPEIRDC 222 (429)
Q Consensus 160 ~~~~~C~~~~C~~~~~-----------C~~~~~G~~c~~~~~~~C~------~~~C~~~~~C~~~~~~~C~C~~~g~~~C 222 (429)
. + .|.+.||.++++ |+++|+|.+|+. +|++|. +.+|.+++.++ +.| ..+.+..
T Consensus 166 ~-i-~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~-~i~ec~~~~~c~~~~c~~gG~~~------~~C-~~g~n~~ 235 (267)
T 4fbr_A 166 N-V-INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP-DTYTVENQWGGSTAPWNPGGFWM------IGA-RNGQNVV 235 (267)
T ss_dssp C-E-EEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET-TEEEEEEECSCTTSCCEEEEEEE------CCC-CTTCCEE
T ss_pred c-c-ccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc-ccceeccCCCccCCcccCCCeEE------Eec-CCCCccc
Confidence 2 1 233445555554 455699999998 888854 44444444332 334 4442211
Q ss_pred CCCCCCCCCCCCCCCCcEeccCCCCCeeEeCCCCCcCC
Q psy11059 223 TSNPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGD 260 (429)
Q Consensus 223 ~~~~C~~~~c~~C~~~g~C~~~~~~~~~C~C~~g~~G~ 260 (429)
.-. .+|.++|+| .+...+|+|.|++||+|.
T Consensus 236 ~c~-------~~c~ngGtC-~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 236 ALN-------VASSDGGKT-LAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp EEE-------EECSSTTSE-EEEEEEETTSCCEEEEEE
T ss_pred cCC-------cCCCCCCEe-eCCCcceeecCCCCcccc
Confidence 111 257788888 666677888888888764
No 5
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.77 E-value=3.1e-20 Score=164.84 Aligned_cols=133 Identities=23% Similarity=0.578 Sum_probs=102.3
Q ss_pred CCCeeeeCCCCCCCC---CCccCCCCCCC---CCCCCCCCeeCCccccCCC-----CCeeeeCCCCccCCCCcccccCCC
Q psy11059 271 RAGYFCDCPPTYGGK---NCSVELTGCVG---PDTCLNGGTCKPYLVDETQ-----HRFNCTCPSGYHGKICEKCFCRPG 339 (429)
Q Consensus 271 ~~~~~C~C~~G~~g~---~c~~~~~~C~~---~~~C~~~~~C~~~~~~~~~-----~~~~C~C~~G~~G~~C~~C~C~~g 339 (429)
.++|+|.|++||+|. .|+ ++++|.. ..+|.++++| ++ .. ++|.|.|++||+|..+
T Consensus 22 ~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C----~~-~~~~~~~g~y~C~C~~G~~g~~~-------- 87 (186)
T 1z1y_A 22 SNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQC----IE-NPDPAQVNMYXCGCIEGYTLXED-------- 87 (186)
T ss_dssp SSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEE----EE-CSSTTSSCSEEEEECTTEEEETT--------
T ss_pred CCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEe----ec-CCCCcCCCCEECCCCCCCccCCC--------
Confidence 333444444444333 443 4567762 2779888999 55 55 7999999999987632
Q ss_pred ccCCCCccCCCcCCCCCcCCCCccc----cCCCceEEecCCCCCC-----CCccCC-CCCCCCCCC-CCCCEEccCCCCe
Q psy11059 340 FAGDHCDVDFDECLSNPCFNGATCQ----NKINGYTCVCAPGYSG-----KECSIN-INECESSPC-LHGATCIDEVATF 408 (429)
Q Consensus 340 ~~g~~C~~~i~~C~~~~C~~~~~C~----~~~g~~~C~C~~G~~G-----~~C~~~-~~~C~~~~C-~~~~~C~~~~~~~ 408 (429)
.| .+++|...||.++++|+ +..++|+|.|++||+| ..|+.. +++|. .+| .++++|+++.++|
T Consensus 88 ----~C--~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y 160 (186)
T 1z1y_A 88 ----TC--VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVY 160 (186)
T ss_dssp ----EE--EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEE
T ss_pred ----CC--CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCe
Confidence 23 36899999999999999 8889999999999998 788632 58897 489 8899999999999
Q ss_pred eeeCCCCCCCCCCCCC
Q psy11059 409 SCVCPKGLTGRLCETN 424 (429)
Q Consensus 409 ~C~C~~g~~G~~C~~~ 424 (429)
+|.|++||+|..++..
T Consensus 161 ~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 161 XCQCMEGFTFDXEXNV 176 (186)
T ss_dssp EEEECTTCEEETTTTE
T ss_pred eeECCCCCccCccccc
Confidence 9999999999988753
No 6
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.75 E-value=1.4e-19 Score=160.57 Aligned_cols=139 Identities=19% Similarity=0.456 Sum_probs=118.7
Q ss_pred CCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCC---CCCCCCCCeEeeCCCC-----C
Q psy11059 15 QRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTT---APPCLNGATCRPQLTE-----Q 86 (429)
Q Consensus 15 ~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~---~~~C~~~g~C~~~~~~-----~ 86 (429)
..+||.| |+|+ +..++|+|+|++||+|. ++..|+ +++ +|.. .++|.++++|+ ++. +
T Consensus 9 ~~~pC~n-g~C~-~~~g~~~C~C~~G~~g~---------~~~~C~-~id--~C~~~~~~~~C~~~~~C~--~~~~~~~~g 72 (186)
T 1z1y_A 9 VDTICXN-GQLV-QMSNHFXCMCNEGLVHL---------SENTCE-EXN--ECXXETLGXACGEFGQCI--ENPDPAQVN 72 (186)
T ss_dssp TTCCCBT-EEEE-ECSSCEEEEECTTEEEE---------ETTEEE-ECC--CCSGGGTTSEEETTEEEE--ECSSTTSSC
T ss_pred CCCCCCC-CEeE-CCCCCeEeECCCCCccC---------CCCccC-CCC--cccCCCCCCCCCCCCEee--cCCCCcCCC
Confidence 6889995 5999 99999999999999932 134897 778 9982 57899999999 887 8
Q ss_pred CeeeeCCCCCc------ccCCCCCCCCCCCCeEe----cCCC---ce-eCCeec-----cCCCCCCCCCCCCCCC-CCCC
Q psy11059 87 LYECVCPPGYK------EIRDCTSNPCLNDGVCV----WMFD---VT-IQVYKG-----RYCELPEIGDCSSNPC-LNDG 146 (429)
Q Consensus 87 ~~~C~C~~Gy~------~~~~C~~~~C~~~g~C~----~~~~---C~-~~g~~G-----~~C~~~~i~~C~~~~C-~~~g 146 (429)
+|+|+|++||+ .+++|...||.++++|+ +..+ |. ++||+| ..|+..++++|.. +| .+++
T Consensus 73 ~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~ 151 (186)
T 1z1y_A 73 MYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNE 151 (186)
T ss_dssp SEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTE
T ss_pred CEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCc
Confidence 99999999998 46899999999999999 5554 99 999998 8898412489984 89 8999
Q ss_pred eEeeCCCCccccCCCCCCCCCCCCCCCceecCCcccCCccc
Q psy11059 147 VCVDVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYWEL 187 (429)
Q Consensus 147 ~C~~~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~G~~c~~ 187 (429)
+|++..++|.|. |..||+|..++.
T Consensus 152 ~C~n~~g~y~C~-----------------C~~G~~g~~~~~ 175 (186)
T 1z1y_A 152 VCXNVEGVYXCQ-----------------CMEGFTFDXEXN 175 (186)
T ss_dssp EEEEETTEEEEE-----------------ECTTCEEETTTT
T ss_pred ceecCCCCeeeE-----------------CCCCCccCcccc
Confidence 999999999998 999999988764
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.7e-18 Score=144.10 Aligned_cols=126 Identities=37% Similarity=0.892 Sum_probs=101.0
Q ss_pred CCCCCCCCCCCCeeCCccccC-CCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccc-------
Q psy11059 293 GCVGPDTCLNGGTCKPYLVDE-TQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQ------- 364 (429)
Q Consensus 293 ~C~~~~~C~~~~~C~~~~~~~-~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~------- 364 (429)
+|.. ++|.++++| ++. ..++|.|.|++||+|..|+...-. ......|. ++++|..+||.++++|+
T Consensus 2 ~C~~-~pC~~~g~C----~~~~~~g~~~C~C~~G~~G~~C~~~~~~-~~~~~~c~-~~~~C~~~~C~~~g~C~~~~~~~~ 74 (143)
T 4d90_A 2 ICDP-NPCENGGIC----LPGLADGSFSCECPDGFTDPNCSSVVEV-ASDEEEPT-SAGPCTPNPCHNGGTCEISEAYRG 74 (143)
T ss_dssp -CCS-CCCGGGCEE----EC-----CCEEECCTTCCTTTTCSCCCC-TTTTTSCC-CCCTTSSCCCCTTCEEEECCCEET
T ss_pred cCCC-CcCCCCCEe----eCCCCCCCEEeECCCCCCCCCCccCccc-cccccccc-cCCcCCCCCCCCCCEecCCCcccc
Confidence 4665 889999999 431 226899999999999988631110 00123332 67899999999999999
Q ss_pred cCCCceEEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCC
Q psy11059 365 NKINGYTCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNI 425 (429)
Q Consensus 365 ~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i 425 (429)
+..++|+|.|++||+|..|+.++++|...+|.++++|+++.++|+|.|++||+|++|+..+
T Consensus 75 ~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 75 DTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp TEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred CCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 6778999999999999999889999999999999999999999999999999999998654
No 8
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.72 E-value=5.1e-18 Score=162.87 Aligned_cols=157 Identities=32% Similarity=0.849 Sum_probs=74.3
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQL 87 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~ 87 (429)
..++| +++|+++|+|+ + .++|+|++||+ |..|+.+ .|. .+|.++|+|+ . .
T Consensus 147 ~~~~C---~~~C~~~G~C~-~---~~~C~C~~G~~------------G~~C~~~----~C~--~~C~~~G~C~--~---~ 196 (324)
T 2ygq_A 147 QQAEC---PGGCRNGGFCN-E---RRICECPDGFH------------GPHCEKA----LCT--PRCMNGGLCV--T---P 196 (324)
T ss_dssp CCCCC---SSCCCSSCEEC-T---TSCEECCTTEE------------SSSSCEE----SSS--SCCCTTCEEC--S---S
T ss_pred cCCCC---CCCCCCCCEEC-C---CCeEECCCCCc------------CCCCCCC----CCC--CCCCCCCEEc--C---C
Confidence 34566 57999999998 4 58999999999 9999864 565 4799999999 4 5
Q ss_pred eeeeCCCCCc----ccCCCCCCCCCCCCeEecCCCce-eCCeeccCCCCCCCCCCCCCCCCCCCeEeeCCCCccccCCCC
Q psy11059 88 YECVCPPGYK----EIRDCTSNPCLNDGVCVWMFDVT-IQVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYCELPEI 162 (429)
Q Consensus 88 ~~C~C~~Gy~----~~~~C~~~~C~~~g~C~~~~~C~-~~g~~G~~C~~~~i~~C~~~~C~~~g~C~~~~~g~~C~~~~~ 162 (429)
++|+|++||+ +.+.|. .+|.++|+|+....|. ++||+|..|+. ++|. ++|.++|+|+. .+.|.
T Consensus 197 ~~C~C~~G~~G~~C~~~~C~-~~C~~~G~C~~~~~C~C~~G~~G~~C~~---~~C~-~~C~~~g~C~~---~~~C~---- 264 (324)
T 2ygq_A 197 GFCICPPGFYGVNCDKANCS-TTCFNGGTCFYPGKCICPPGLEGEQCEI---SKCP-QPCRNGGKCIG---KSKCK---- 264 (324)
T ss_dssp CCEECCTTCBTTTTCBCCCS-SCCCSSCCBSCSSCBCCCTTCCTTTTC--------------------------------
T ss_pred CEEeCCCCccCCCcccCcCC-CCCCCCCeeCCCCeeeCCCCccCCCCCc---CcCC-CcCCCCCEECC---CCEEE----
Confidence 7899999998 445564 6788889998765588 99999998863 5675 67888888874 34565
Q ss_pred CCCCCCCCCCCceecCCcccCCcccCCCCCCCCCCCCCCCEEeeCCCCeeeccCCCCCCCCCCCCCCCCCCCCCCCcEec
Q psy11059 163 GDCSSNPCLNDGVCVDVYKGRYWELPEIRDCTSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVNPCQNGGKCN 242 (429)
Q Consensus 163 ~~C~~~~C~~~~~C~~~~~G~~c~~~~~~~C~~~~C~~~~~C~~~~~~~C~C~~~g~~~C~~~~C~~~~c~~C~~~g~C~ 242 (429)
|.+||+|..|+. ++|. . +|.++|+|
T Consensus 265 -------------C~~G~~G~~C~~---~~C~-~-------------------------------------~C~~~g~C- 289 (324)
T 2ygq_A 265 -------------CSKGYQGDLCSK---PVCE-P-------------------------------------GCGAHGTC- 289 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------CCCCCcCCCCcC---CCCC-C-------------------------------------CCCCCCEE-
Confidence 888898888763 2232 1 35566777
Q ss_pred cCCCCCeeEeCCCCCcCCCCCC
Q psy11059 243 EDETGNYDCTCDALHTGDPCKH 264 (429)
Q Consensus 243 ~~~~~~~~C~C~~g~~G~~C~~ 264 (429)
.+ .++|.|++||+|..|+.
T Consensus 290 ~~---~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 290 HE---PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ----------------------
T ss_pred CC---CCEeECCCCCcCCCCCC
Confidence 22 46889999999998875
No 9
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.72 E-value=2.9e-18 Score=149.41 Aligned_cols=144 Identities=31% Similarity=0.804 Sum_probs=103.3
Q ss_pred CCCCeeEeCCCCCcCCCCCCCcccc---CCC------CeeeeCCCCCCCCCCccCCCCCCCCCCCC-CCCeeCCccccCC
Q psy11059 245 ETGNYDCTCDALHTGDPCKHGSCVD---KRA------GYFCDCPPTYGGKNCSVELTGCVGPDTCL-NGGTCKPYLVDET 314 (429)
Q Consensus 245 ~~~~~~C~C~~g~~G~~C~~~~C~~---~~~------~~~C~C~~G~~g~~c~~~~~~C~~~~~C~-~~~~C~~~~~~~~ 314 (429)
....+.|.|++||+|+.|+. .|.. -.+ ..+|+|++||+|..|+.. .|.. .|. .++.| .+
T Consensus 13 ~~~~~~c~C~~g~~G~~C~~-~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~--~C~~--~C~~~~g~C----~~-- 81 (169)
T 2vj2_A 13 IEGRSAVTCDDYYYGFGCNK-FCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRA--ICRQ--GCSPKHGSC----KL-- 81 (169)
T ss_dssp --------CCTTEETTTTCE-ECCCEEETTEEEEECSSCCEEECTTEESTTSCEE--CCCT--TCCTTTEEC----SS--
T ss_pred cccCeeeeCCCcCcCCCccc-ccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCC--CCCC--CCCCCCccc----CC--
Confidence 45678899999999999874 3432 122 335699999999999643 4653 464 45677 22
Q ss_pred CCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCC-cCCCCccccCCCceEEecCCCCCCCCccCCCCCCCC-
Q psy11059 315 QHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNP-CFNGATCQNKINGYTCVCAPGYSGKECSININECES- 392 (429)
Q Consensus 315 ~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~- 392 (429)
++.|+|++||.|..|+. |...+ |.++ +|+ ++|+|+|++||+|..|+.++++|..
T Consensus 82 --~~~C~C~~G~~G~~C~~------------------C~~~~~C~~g-~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~ 137 (169)
T 2vj2_A 82 --PGDCRCQYGWQGLYCDK------------------CIPHPGCVHG-ICN---EPWQCLCETNWGGQLCDKDLNYCGTH 137 (169)
T ss_dssp --TTCCEECTTEESSSSCE------------------ECCCTTCSSE-ECS---STTCCEECTTEETTTTCEESCHHHHT
T ss_pred --CCeeECCCCCCCCCccc------------------CCCCCCCCCC-CcC---CCCEEeCCCCCCCCcccCCCCCCCCC
Confidence 47888888887776552 33333 6544 776 5689999999999999878999975
Q ss_pred CCCCCCCEEccC-CCCeeeeCCCCCCCCCCCC
Q psy11059 393 SPCLHGATCIDE-VATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 393 ~~C~~~~~C~~~-~~~~~C~C~~g~~G~~C~~ 423 (429)
.+|.++++|+++ .++|+|+|++||+|.+|++
T Consensus 138 ~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 138 QPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp CCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 899999999996 7899999999999999974
No 10
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=160.67 Aligned_cols=152 Identities=38% Similarity=0.929 Sum_probs=61.8
Q ss_pred CCCCCCcEeccCCCCCeeEeCCCCCcCCCCCCCccccC-------CCCeeeeCCCCCCCCCCccCCCCCCCCCCCCCCCe
Q psy11059 233 NPCQNGGKCNEDETGNYDCTCDALHTGDPCKHGSCVDK-------RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGT 305 (429)
Q Consensus 233 ~~C~~~g~C~~~~~~~~~C~C~~g~~G~~C~~~~C~~~-------~~~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~ 305 (429)
++|.++|+| .. .+.|.|++||+|..|+...|... ...++|.|++||+|..|+. ..|. .+|.++++
T Consensus 153 ~~C~~~G~C-~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~--~~C~--~~C~~~G~ 224 (324)
T 2ygq_A 153 GGCRNGGFC-NE---RRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDK--ANCS--TTCFNGGT 224 (324)
T ss_dssp SCCCSSCEE-CT---TSCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCB--CCCS--SCCCSSCC
T ss_pred CCCCCCCEE-CC---CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCccc--CcCC--CCCCCCCe
Confidence 479999999 32 58999999999999885443221 1247899999999999965 3464 67999999
Q ss_pred eCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccC
Q psy11059 306 CKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSI 385 (429)
Q Consensus 306 C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~ 385 (429)
| .. .+.|.|++||.|..|+ +++|. .+|.++++|+. .++|.|++||+|+.|+
T Consensus 225 C----~~----~~~C~C~~G~~G~~C~----------------~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~- 275 (324)
T 2ygq_A 225 C----FY----PGKCICPPGLEGEQCE----------------ISKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCS- 275 (324)
T ss_dssp B----SC----SSCBCCCTTCCTTTTC-----------------------------------------------------
T ss_pred e----CC----CCeeeCCCCccCCCCC----------------cCcCC-CcCCCCCEECC---CCEEECCCCCcCCCCc-
Confidence 9 22 3577777777665443 34564 57999999974 4799999999999996
Q ss_pred CCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCCC
Q psy11059 386 NINECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNID 426 (429)
Q Consensus 386 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i~ 426 (429)
+++|. .+|.++++|++ .++|.|++||+|.+|+....
T Consensus 276 -~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~~ 311 (324)
T 2ygq_A 276 -KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNKRYE 311 (324)
T ss_dssp -----------------------------------------
T ss_pred -CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCCCCCc
Confidence 45665 57989999976 47999999999999987643
No 11
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.1e-17 Score=139.02 Aligned_cols=114 Identities=36% Similarity=0.846 Sum_probs=84.3
Q ss_pred CCCCCCCCCCCCCCEeccCCC--CceEEecCCCCcccccccccCcCCCCCCCC------------CCCCCCCCCCCCCCC
Q psy11059 10 SPCDAQRNPCQNGGKCNEDET--GNYDCTCDALHTVCCVGLANQTLGSIHCET------------PISNQICTTAPPCLN 75 (429)
Q Consensus 10 ~~C~~~~~~C~~~g~C~~~~~--~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~------------~~~~~~C~~~~~C~~ 75 (429)
|+| .++||.++|+|+ +.. ++|+|+|++||+ |..|+. +++ +|. .++|.+
T Consensus 1 d~C--~~~pC~~~g~C~-~~~~~g~~~C~C~~G~~------------G~~C~~~~~~~~~~~~c~~~~--~C~-~~~C~~ 62 (143)
T 4d90_A 1 DIC--DPNPCENGGICL-PGLADGSFSCECPDGFT------------DPNCSSVVEVASDEEEPTSAG--PCT-PNPCHN 62 (143)
T ss_dssp --C--CSCCCGGGCEEE-C-----CCEEECCTTCC------------TTTTCSCCCCTTTTTSCCCCC--TTS-SCCCCT
T ss_pred CcC--CCCcCCCCCEee-CCCCCCCEEeECCCCCC------------CCCCccCccccccccccccCC--cCC-CCCCCC
Confidence 689 799999999999 765 689999999999 888874 223 454 455555
Q ss_pred CCeEeeC-----CCCCCeeeeCCCCCcccCCCCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCCCCCCCCCeEee
Q psy11059 76 GATCRPQ-----LTEQLYECVCPPGYKEIRDCTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSSNPCLNDGVCVD 150 (429)
Q Consensus 76 ~g~C~~~-----~~~~~~~C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~~~C~~~g~C~~ 150 (429)
+++|+.. ++.++|+|+|++ ||+|..|+. +|++|..++|.++++|++
T Consensus 63 ~g~C~~~~~~~~~~~~~~~C~C~~----------------------------G~~G~~C~~-~i~~C~~~~C~~~~~C~~ 113 (143)
T 4d90_A 63 GGTCEISEAYRGDTFIGYVCKCPR----------------------------GFNGIHCQH-NINECEVEPCKNGGICTD 113 (143)
T ss_dssp TCEEEECCCEETTEECCEEEECCT----------------------------TEESTTSCE-ECCTTTTCCSCTTCEEEE
T ss_pred CCEecCCCccccCCCCCeEeECcC----------------------------CCcCCCccc-CCCcCCCCCCCCCCEeEC
Confidence 5555521 122345555554 477888987 899999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCCCCCceecCCcccCCccc
Q psy11059 151 VYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYWEL 187 (429)
Q Consensus 151 ~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~G~~c~~ 187 (429)
..++|.|. |..+|+|+.++.
T Consensus 114 ~~g~~~C~-----------------C~~G~~G~~c~~ 133 (143)
T 4d90_A 114 LVANYSCE-----------------CPGEFMGRNCQY 133 (143)
T ss_dssp ETTEEEEE-----------------CCTTCBSTTSCB
T ss_pred CCCCeEeE-----------------CCCCCccCCcee
Confidence 99999998 999999998875
No 12
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.60 E-value=4e-16 Score=135.87 Aligned_cols=149 Identities=25% Similarity=0.648 Sum_probs=103.4
Q ss_pred CCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCeeeeCCCCCc----ccCCCC
Q psy11059 28 DETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYECVCPPGYK----EIRDCT 103 (429)
Q Consensus 28 ~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy~----~~~~C~ 103 (429)
.....++|+|++||+ |..|+. +|.....|..+++|+ . .++|+|++||+ ++++|.
T Consensus 12 ~~~~~~~c~C~~g~~------------G~~C~~-----~C~~~~~c~~~g~C~--~---~g~C~C~~G~~G~~C~~~~C~ 69 (169)
T 2vj2_A 12 SIEGRSAVTCDDYYY------------GFGCNK-----FCRPRDDFFGHYACD--Q---NGNKTCMEGWMGPECNRAICR 69 (169)
T ss_dssp ---------CCTTEE------------TTTTCE-----ECCCEEETTEEEEEC--S---SCCEEECTTEESTTSCEECCC
T ss_pred ccccCeeeeCCCcCc------------CCCccc-----ccCCCCCcCCCCEeC--C---CCeeECCCCCcCCCCCCCCCC
Confidence 345678999999999 888873 466344688889998 3 56799999999 344555
Q ss_pred CCCCC-CCCeEecCCCce-eCCeeccCCCCCCCCCCCCCC-CCCCCeEeeCCCCccccCCCCCCCCCCCCCCCceecCCc
Q psy11059 104 SNPCL-NDGVCVWMFDVT-IQVYKGRYCELPEIGDCSSNP-CLNDGVCVDVYKGRYCELPEIGDCSSNPCLNDGVCVDVY 180 (429)
Q Consensus 104 ~~~C~-~~g~C~~~~~C~-~~g~~G~~C~~~~i~~C~~~~-C~~~g~C~~~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~ 180 (429)
. +|. .+|.|++...|. ++||+|..|+. |...+ |.++ +|+ +.+.|. |.++|
T Consensus 70 ~-~C~~~~g~C~~~~~C~C~~G~~G~~C~~-----C~~~~~C~~g-~C~---~~~~C~-----------------C~~G~ 122 (169)
T 2vj2_A 70 Q-GCSPKHGSCKLPGDCRCQYGWQGLYCDK-----CIPHPGCVHG-ICN---EPWQCL-----------------CETNW 122 (169)
T ss_dssp T-TCCTTTEECSSTTCCEECTTEESSSSCE-----ECCCTTCSSE-ECS---STTCCE-----------------ECTTE
T ss_pred C-CCCCCCcccCCCCeeECCCCCCCCCccc-----CCCCCCCCCC-CcC---CCCEEe-----------------CCCCC
Confidence 3 465 678898755599 99999999973 66666 7754 887 356676 99999
Q ss_pred ccCCcccCCCCCCCC-CCCCCCCEEeeCCCCeeeccCCCCCCCCCCCCCCCCCCCCCCCcEeccCCCCCeeEeCCCCCcC
Q psy11059 181 KGRYWELPEIRDCTS-NPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTG 259 (429)
Q Consensus 181 ~G~~c~~~~~~~C~~-~~C~~~~~C~~~~~~~C~C~~~g~~~C~~~~C~~~~c~~C~~~g~C~~~~~~~~~C~C~~g~~G 259 (429)
+|..|+. ++++|.. .+|. ++|+|+....++|+|+|++||+|
T Consensus 123 ~G~~C~~-~~~~C~~~~~C~-------------------------------------~~g~C~~~~~~~~~C~C~~G~~G 164 (169)
T 2vj2_A 123 GGQLCDK-DLNYCGTHQPCL-------------------------------------NGGTCSNTGPDKYQCSCPEGYSG 164 (169)
T ss_dssp ETTTTCE-ESCHHHHTCCCC-------------------------------------TTCEEEECSTTCEEEECCTTCCS
T ss_pred CCCcccC-CCCCCCCCCCCC-------------------------------------CCCEEcCCCCCCcEeECCCCCcC
Confidence 9999986 6777753 4444 44555222356788999999999
Q ss_pred CCCC
Q psy11059 260 DPCK 263 (429)
Q Consensus 260 ~~C~ 263 (429)
..|+
T Consensus 165 ~~Ce 168 (169)
T 2vj2_A 165 PNCE 168 (169)
T ss_dssp TTSC
T ss_pred cCcC
Confidence 9886
No 13
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.56 E-value=2.6e-15 Score=116.49 Aligned_cols=82 Identities=24% Similarity=0.675 Sum_probs=67.6
Q ss_pred cCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCcc-CCCCCCCCCCCCCCCEEccCC--CCeeeeC
Q psy11059 336 CRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECS-ININECESSPCLHGATCIDEV--ATFSCVC 412 (429)
Q Consensus 336 C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~-~~~~~C~~~~C~~~~~C~~~~--~~~~C~C 412 (429)
|.+||.|..| ++++|...||. +..++|+|.|++||+ .|+ +++++|.++||.++|+|++.. ++|+|.|
T Consensus 6 C~~g~~g~~c--~~~~c~~~pC~------n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C 75 (91)
T 1tpg_A 6 CRDEKTQMIY--QQHQSWLRPVL------RSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQC 75 (91)
T ss_dssp CBCSSSCCBC--CSSCEEEEECS------SSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEEC
T ss_pred CCCCCcCCeE--CCCcccCCccc------cCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeEC
Confidence 3334444455 36778766654 457889999999998 897 588999999999999999887 8999999
Q ss_pred CCCCCCCCCCCCCCC
Q psy11059 413 PKGLTGRLCETNIDD 427 (429)
Q Consensus 413 ~~g~~G~~C~~~i~~ 427 (429)
++||+|.+|+++|+|
T Consensus 76 ~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 76 PEGFAGKSCEIDTRA 90 (91)
T ss_dssp CTTCBSSSCCBCSSC
T ss_pred CCCCcCCcCCcCCCC
Confidence 999999999999986
No 14
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.56 E-value=7.1e-15 Score=153.16 Aligned_cols=115 Identities=26% Similarity=0.608 Sum_probs=77.0
Q ss_pred CCCCCCCCCCCCCEeccCCCCceE---EecCCCCcccccccccCcCCCCCCCCCC--------CCCCCCC---CCCCCCC
Q psy11059 11 PCDAQRNPCQNGGKCNEDETGNYD---CTCDALHTVCCVGLANQTLGSIHCETPI--------SNQICTT---APPCLNG 76 (429)
Q Consensus 11 ~C~~~~~~C~~~g~C~~~~~~~~~---C~C~~g~~g~~~~~~~~~~~G~~C~~~~--------~~~~C~~---~~~C~~~ 76 (429)
+| ..+||.++++|. +..|.|. |.|++||+ |..|+.++ + +|.. ..+|.++
T Consensus 436 ~C--~~~pc~n~~~C~-~g~G~~~~G~C~C~~Gy~------------G~~Ce~~~~~~~~~~~~--~C~~~~~~~~Cs~~ 498 (690)
T 3fcs_B 436 AC--QAQAEPNSHRCN-NGNGTFECGVCRCGPGWL------------GSQCECSEEDYRPSQQD--ECSPREGQPVCSQR 498 (690)
T ss_dssp GG--GTTCCTTCTTTT-TTSEEEETTEEEECTTCC------------SSSSCCSCC------CC--CCSSSSSSCGGGGS
T ss_pred CC--cCCCCCCCCccc-CCCCeEeCCceEeCCCcc------------CCceeeccCccCCccCC--cCCCCCCCCCCCCC
Confidence 67 788999999998 8889998 99999999 99998765 4 5762 1358888
Q ss_pred CeEeeCCCCCCeeeeCC----CCCc------ccCCCCC---CCCCCCCeEecCCCce-eCCeeccCCC--CCCCCCCCC-
Q psy11059 77 ATCRPQLTEQLYECVCP----PGYK------EIRDCTS---NPCLNDGVCVWMFDVT-IQVYKGRYCE--LPEIGDCSS- 139 (429)
Q Consensus 77 g~C~~~~~~~~~~C~C~----~Gy~------~~~~C~~---~~C~~~g~C~~~~~C~-~~g~~G~~C~--~~~i~~C~~- 139 (429)
|+|+ . ++|.|+ +||+ ++++|.. .+|.++|+|+. ..|. .+||+|..|+ . ++++|..
T Consensus 499 G~C~--~----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~-~~~~C~~~ 570 (690)
T 3fcs_B 499 GECL--C----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTT-RTDTCMSS 570 (690)
T ss_dssp EEEC--S----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEEC-CCTTTBCT
T ss_pred CEEE--C----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCC-CCCcccCC
Confidence 8887 3 468887 6665 2344553 34555566654 1155 6666666665 3 4555553
Q ss_pred --CCCCCCCeEee
Q psy11059 140 --NPCLNDGVCVD 150 (429)
Q Consensus 140 --~~C~~~g~C~~ 150 (429)
.+|.++|+|++
T Consensus 571 ~g~~C~~~G~C~~ 583 (690)
T 3fcs_B 571 NGLLCSGRGKCEC 583 (690)
T ss_dssp TSSBTSSSCEEET
T ss_pred CCCCCCCCCEEeC
Confidence 34555556643
No 15
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.55 E-value=4.9e-15 Score=152.18 Aligned_cols=122 Identities=33% Similarity=0.889 Sum_probs=101.4
Q ss_pred CCCCCCCCCCCCCCCeeCCccccCCCCCeee-eCCCCccCCCCcccccCCCccCCCCccCCCcCCCCC--cCCCC---cc
Q psy11059 290 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNC-TCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNP--CFNGA---TC 363 (429)
Q Consensus 290 ~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C-~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~--C~~~~---~C 363 (429)
++++|.. ++|.++++| ++...++|+| .|++||+|. |..|+ +|++|...| |.+++ +|
T Consensus 2 DIDeC~~-nPC~~gg~C----~n~~~Gsy~C~~C~~GytGd------------g~~Ce-DiDEC~~~p~~C~~gg~~~~C 63 (634)
T 1yo8_A 2 DPDGCLS-NPCFPGAQC----SSFPDGSWSCGFCPVGFLGN------------GTHCE-DLDECALVPDICFSTSKVPRC 63 (634)
T ss_dssp --CGGGG-CCSCTTCCE----EECTTSCEEECCCCTTBCSC------------SSSCC-BCCTTTTSCCCSCCCSSSCCE
T ss_pred cccccCC-CCCCCCCEE----ecCCCCCeECCcCCCccCCC------------CCCcc-ccccccCCCCcccCCccccce
Confidence 4567776 899999999 5523345999 999999874 46675 899999888 99998 99
Q ss_pred ccCCCceEEe-cCCCCCCCCcc--------------CCCCCCCC--CCCCCCCEEccCC----CCeeeeCCCCCCC--CC
Q psy11059 364 QNKINGYTCV-CAPGYSGKECS--------------ININECES--SPCLHGATCIDEV----ATFSCVCPKGLTG--RL 420 (429)
Q Consensus 364 ~~~~g~~~C~-C~~G~~G~~C~--------------~~~~~C~~--~~C~~~~~C~~~~----~~~~C~C~~g~~G--~~ 420 (429)
+++.++|+|. |++||+|..|+ +++++|.. ++|.++++|+++. ++|+|.|++||+| ..
T Consensus 64 vNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~ 143 (634)
T 1yo8_A 64 VNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLI 143 (634)
T ss_dssp EECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSS
T ss_pred eeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcc
Confidence 9999999998 99999988753 47899985 5899999999998 8999999999998 79
Q ss_pred CCC--CCCCCC
Q psy11059 421 CET--NIDDCE 429 (429)
Q Consensus 421 C~~--~i~~C~ 429 (429)
|++ +|+||.
T Consensus 144 Ce~d~DiDeC~ 154 (634)
T 1yo8_A 144 CGEDSDLDGWP 154 (634)
T ss_dssp EEECTTSSSSC
T ss_pred cccccCccccc
Confidence 974 788873
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.53 E-value=5.6e-15 Score=125.04 Aligned_cols=117 Identities=30% Similarity=0.717 Sum_probs=93.0
Q ss_pred CCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCC---CcCCCCccccCCCceEEec
Q psy11059 298 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSN---PCFNGATCQNKINGYTCVC 374 (429)
Q Consensus 298 ~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~---~C~~~~~C~~~~g~~~C~C 374 (429)
.+|.++++| ++ .|.|.|++||+|.. + .....+..|+ +|++|... +|.++++|+++.++|+|.|
T Consensus 7 ~~C~~~~~C----~~----~~~C~C~~G~~g~~-~----~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C 72 (143)
T 2bou_A 7 RWCPQDSSC----VN----ATACRCNPGFSSFS-E----IITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVC 72 (143)
T ss_dssp TTCCTTEEE----SS----SSCEEECTTEECSS-S----SBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEE
T ss_pred CcCCCCCEE----cC----CCEEeCCCCCcCcc-c----cccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeEC
Confidence 678899999 33 38999999999852 0 0012356775 89999875 8999999999999999999
Q ss_pred CCCCCCC------------CccCCCCCCC--CCCCCCCCEEccCCCCeeeeCCCCCCCCCCCC---CCCCCC
Q psy11059 375 APGYSGK------------ECSININECE--SSPCLHGATCIDEVATFSCVCPKGLTGRLCET---NIDDCE 429 (429)
Q Consensus 375 ~~G~~G~------------~C~~~~~~C~--~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~---~i~~C~ 429 (429)
++||+|. .|+ +|++|. .++|.++++|+++.++|+|.|++||+|..... ++++|+
T Consensus 73 ~~Gy~g~~~~~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 73 SPGYEPVSGAKTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143 (143)
T ss_dssp CTTEEETTCCSCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCBC
T ss_pred CCCcccCcCccccccCCCCCcC-CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCccC
Confidence 9999876 564 889997 47899999999999999999999999875432 455553
No 17
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.53 E-value=1.1e-14 Score=149.57 Aligned_cols=141 Identities=23% Similarity=0.570 Sum_probs=108.0
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCC-ceEE-ecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCC--CCCCC---eEe
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETG-NYDC-TCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPP--CLNGA---TCR 80 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~-~~~C-~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~--C~~~g---~C~ 80 (429)
++||| ..+||+++++|+ +..+ +|+| .|++||+|+ |..|+ +++ +|. ..+ |.+++ +|+
T Consensus 2 DIDeC--~~nPC~~gg~C~-n~~~Gsy~C~~C~~GytGd----------g~~Ce-DiD--EC~-~~p~~C~~gg~~~~Cv 64 (634)
T 1yo8_A 2 DPDGC--LSNPCFPGAQCS-SFPDGSWSCGFCPVGFLGN----------GTHCE-DLD--ECA-LVPDICFSTSKVPRCV 64 (634)
T ss_dssp --CGG--GGCCSCTTCCEE-ECTTSCEEECCCCTTBCSC----------SSSCC-BCC--TTT-TSCCCSCCCSSSCCEE
T ss_pred ccccc--CCCCCCCCCEEe-cCCCCCeECCcCCCccCCC----------CCCcc-ccc--ccc-CCCCcccCCcccccee
Confidence 58999 789999999999 7774 5999 999999966 69997 888 998 566 99999 999
Q ss_pred eCCCCCCeeee-CCCCCcccCCCCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCC--CCCCCCCeEeeCC----C
Q psy11059 81 PQLTEQLYECV-CPPGYKEIRDCTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSS--NPCLNDGVCVDVY----K 153 (429)
Q Consensus 81 ~~~~~~~~~C~-C~~Gy~~~~~C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~--~~C~~~g~C~~~~----~ 153 (429)
++.++|+|. |++||+... |.. .++ ......+..|+ +|++|.. ++|.++++|++.. +
T Consensus 65 --Nt~gsY~C~~C~~Gy~G~~-c~g-----~g~-------~~~~~dg~~C~--dideC~~~~~pC~~~~~Cvnt~~~~~G 127 (634)
T 1yo8_A 65 --NTQPGFHCLPCPPRYRGNQ-PVG-----VGL-------EAAKTEKQVCE--PENPCKDKTHNCHKHAECIYLGHFSDP 127 (634)
T ss_dssp --ECSSSEEECCCCTTEEECC-CEE-----SSS-------HHHHSCCCCEE--ECCTTTTTCCCCCTTEEEEECCTTCSS
T ss_pred --eccCceecccCCCCcccCc-ccc-----ccc-------cccccCCCccc--ccccccCCCcccccCcccccccccccc
Confidence 999999999 999998321 100 000 00001256676 7999985 5899999999998 8
Q ss_pred CccccCCCCCCCCCCCCCCCceecCCccc--CCccc-CCCCCCCC--CCCC
Q psy11059 154 GRYCELPEIGDCSSNPCLNDGVCVDVYKG--RYWEL-PEIRDCTS--NPCL 199 (429)
Q Consensus 154 g~~C~~~~~~~C~~~~C~~~~~C~~~~~G--~~c~~-~~~~~C~~--~~C~ 199 (429)
+|.|. |..||.| ..|+. .+|++|.. .+|.
T Consensus 128 sY~C~-----------------C~~Gy~GdG~~Ce~d~DiDeC~~~~~~C~ 161 (634)
T 1yo8_A 128 MYKCE-----------------CQTGYAGDGLICGEDSDLDGWPNLNLVCA 161 (634)
T ss_dssp SEEEE-----------------ECTTEEESSSSEEECTTSSSSCSSCCTTT
T ss_pred ceeee-----------------ccCCccccCcccccccCcccccCCCCccc
Confidence 99998 9999998 78873 27888864 3454
No 18
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.51 E-value=8.2e-15 Score=150.35 Aligned_cols=117 Identities=24% Similarity=0.477 Sum_probs=49.2
Q ss_pred CeeEeCCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCccCCCCCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCcc
Q psy11059 248 NYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH 327 (429)
Q Consensus 248 ~~~C~C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~ 327 (429)
.+.|.|.++|.|..|+ .|.+||+|..++ ....|.. .+|.+.++|.....= ...++.|.|++||.
T Consensus 406 ~~~C~C~~g~~G~~C~-------------~C~~Gy~G~~c~-~~~~C~~-C~C~~~gtc~~~~~C-d~~tg~C~C~~g~~ 469 (525)
T 4aqs_A 406 AGQCRCKLHVEGERCD-------------VCKEGFYDLSAE-DPYGCKS-CACNPLGTIPGGNPC-DSETGYCYCKRLVT 469 (525)
T ss_dssp SSCCCBCTTEETTTTC-------------EECTTEECCCTT-STTSSEE-CCCCTTTBCCSSCCB-CTTTCCBCBCTTCC
T ss_pred CCccCCCCCCCCCccc-------------CCCCCCcCCCCC-CCCCCcc-CCCCCCceecCCCcc-cCCCCEEECCCCCc
Confidence 4568899999999885 588999988775 3445665 667666665321000 23467899999999
Q ss_pred CCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccC--CCceEEecCCCCCCCCcc
Q psy11059 328 GKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNK--INGYTCVCAPGYSGKECS 384 (429)
Q Consensus 328 G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~C~ 384 (429)
|..|+ +|.+||+|... +++.|...+|.+++.+... ...++|.|++||+|+.|+
T Consensus 470 G~~Ce--~C~~G~~g~~~--~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 470 GQRCD--QCLPQHWGLSN--DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp STTTC--C---------------------------------------------------
T ss_pred CCCcc--cCCCCccCCCC--CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 99888 57888887653 4566776667666554332 122356666666666663
No 19
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.51 E-value=3.5e-14 Score=147.96 Aligned_cols=154 Identities=28% Similarity=0.714 Sum_probs=114.3
Q ss_pred CCCCCcEeccCCCCCee---EeCCCCCcCCCCCCCc----------cccCC-----------CCeeeeCC----CCCCCC
Q psy11059 234 PCQNGGKCNEDETGNYD---CTCDALHTGDPCKHGS----------CVDKR-----------AGYFCDCP----PTYGGK 285 (429)
Q Consensus 234 ~C~~~g~C~~~~~~~~~---C~C~~g~~G~~C~~~~----------C~~~~-----------~~~~C~C~----~G~~g~ 285 (429)
+|.++++| .+..+.+. |.|++||+|..|+... |.... ..++|.|+ +||+|.
T Consensus 441 pc~n~~~C-~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~Gy~G~ 519 (690)
T 3fcs_B 441 AEPNSHRC-NNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK 519 (690)
T ss_dssp CCTTCTTT-TTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCCCBST
T ss_pred CCCCCCcc-cCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCCeeCC
Confidence 46666777 44455566 9999999999997543 54321 12589999 999999
Q ss_pred CCccCCCCCCCC--CCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCC---CCcCCC
Q psy11059 286 NCSVELTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLS---NPCFNG 360 (429)
Q Consensus 286 ~c~~~~~~C~~~--~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~---~~C~~~ 360 (429)
.|+.+...|... .+|.++|+| .. +.|.|++||.|..|+ |..++++|.. .+|.++
T Consensus 520 ~Ce~~~~~C~~~~~~~C~~~G~C----~~-----g~C~C~~Gy~G~~Ce------------C~~~~~~C~~~~g~~C~~~ 578 (690)
T 3fcs_B 520 YCECDDFSCVRYKGEMCSGHGQC----SC-----GDCLCDSDWTGYYCN------------CTTRTDTCMSSNGLLCSGR 578 (690)
T ss_dssp TSCBCSSCCCBSSSSBGGGSEEE----ET-----TEEEECTTEESSSSC------------EECCCTTTBCTTSSBTSSS
T ss_pred CcCcccCcCcCCCCCCCCCCCEe----cC-----CeeECcCCCcCCCCc------------cCCCCCcccCCCCCCCCCC
Confidence 998777788742 368888888 22 678888888777554 1134567765 579999
Q ss_pred CccccCCCceEEec-CCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCC
Q psy11059 361 ATCQNKINGYTCVC-APGYSGKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 361 ~~C~~~~g~~~C~C-~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~ 423 (429)
++|+.. +|.| ++||+|..|+. ...| +.+|.++++|++ |..+|+|..|+.
T Consensus 579 G~C~~g----~C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~--------C~~g~tG~~C~~ 628 (690)
T 3fcs_B 579 GKCECG----SCVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE--------CKKFDRGALHDE 628 (690)
T ss_dssp CEEETT----EEECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT--------TTTTCCSSSSSS
T ss_pred CEEeCC----EEECCCCCccCCCcCc-CCCC-CCCCCCCCCccc--------CCCCCccCCCCc
Confidence 999763 9999 99999999974 2445 578999998875 999999997764
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.49 E-value=1.4e-15 Score=131.62 Aligned_cols=135 Identities=19% Similarity=0.451 Sum_probs=96.9
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCC--CCCCeEeeCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPC--LNGATCRPQLT 84 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C--~~~g~C~~~~~ 84 (429)
+||||+ .++||. +|+|+ ++.++|+|+|++||++. .+|..|+ +++..+|. ...+| .++++|+ +.
T Consensus 2 dideC~-~~~~C~-~~~C~-n~~gsy~C~C~~Gy~~~--------~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~--~~ 67 (162)
T 1uzk_A 2 DVNECL-DPTTCI-SGNCV-NTPGSYICDCPPDFELN--------PTRVGCV-DTRSGNCYLDIRPRGDNGDTACS--NE 67 (162)
T ss_dssp CCCGGG-STTSSB-TSEEE-EETTEEEEECCTTCEEC--------TTSSBEE-CCCCEEEEEEC----------CE--EE
T ss_pred ccccCC-CCCCCC-CCEeE-CCCCCEEEeCCCCCeEC--------CCCCccc-CCCCCcccCCCcccCCCCCCccc--CC
Confidence 689994 368997 69999 99999999999999942 3488997 67611276 23344 3578999 77
Q ss_pred CC----CeeeeCCCCCcccCCCCCCCCCCCCeEecCCC----ce-eC--Ceecc----CCCCCCCCCCCC--CCCCCCCe
Q psy11059 85 EQ----LYECVCPPGYKEIRDCTSNPCLNDGVCVWMFD----VT-IQ--VYKGR----YCELPEIGDCSS--NPCLNDGV 147 (429)
Q Consensus 85 ~~----~~~C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~----C~-~~--g~~G~----~C~~~~i~~C~~--~~C~~~g~ 147 (429)
.+ +|+|.|++||...++|. .|..... |. ++ ||+|. .|+ +||||.. ++|.+ ++
T Consensus 68 ~~~~~~~~~C~C~~G~~~~~~C~--------~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~--dideC~~~~~~C~~-g~ 136 (162)
T 1uzk_A 68 IGVGVSKASCCCSLGKAWGTPCE--------MCPAVNTSEYKILCPGGEGFRPNPITVILE--DIDECQELPGLCQG-GK 136 (162)
T ss_dssp EEEEECHHHHHTTTCCEETTTTE--------ECCCTTSHHHHHHCTTCTTEEECTTTCCEE--ECCHHHHCGGGGBT-SE
T ss_pred cCCcccCceeeCCCCCCcCCCcc--------cCCCCCCCCceeECCCCCCcccCCCCCccC--ccccccCCCCCcCC-CE
Confidence 66 89999999999656665 2332222 55 44 99985 455 8999985 45986 69
Q ss_pred EeeCCCCccccCCCCCCCCCCCCCCCceecCCcccCC
Q psy11059 148 CVDVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRY 184 (429)
Q Consensus 148 C~~~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~G~~ 184 (429)
|+++.++|.|. |..||+|..
T Consensus 137 C~n~~gsy~C~-----------------C~~Gy~g~~ 156 (162)
T 1uzk_A 137 CINTFGSFQCR-----------------CPTGYYLNE 156 (162)
T ss_dssp EEECSSCEEEE-----------------CCTTCCBCT
T ss_pred eEcCCCCEEee-----------------CCCCccCCC
Confidence 99999999998 999998853
No 21
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.46 E-value=3.7e-14 Score=119.94 Aligned_cols=123 Identities=25% Similarity=0.554 Sum_probs=93.5
Q ss_pred CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCC--CCCCCCCeEeeCCCCCCeeeeCC
Q psy11059 16 RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTA--PPCLNGATCRPQLTEQLYECVCP 93 (429)
Q Consensus 16 ~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~--~~C~~~g~C~~~~~~~~~~C~C~ 93 (429)
+++|.++|+|+ + .|+|+|++||+|.. -+....+..|+ +++ +|... .+|.++++|+ ++.++|+|+|+
T Consensus 6 ~~~C~~~~~C~-~---~~~C~C~~G~~g~~---~~~~~~~~~C~-did--eC~~~~~~~C~~~~~C~--n~~g~y~C~C~ 73 (143)
T 2bou_A 6 ARWCPQDSSCV-N---ATACRCNPGFSSFS---EIITTPMETCD-DIN--ECATLSKVSCGKFSDCW--NTEGSYDCVCS 73 (143)
T ss_dssp CTTCCTTEEES-S---SSCEEECTTEECSS---SSBCSTTCCCE-ECC--GGGC----CCCTTEEEE--ECSSCEEEEEC
T ss_pred cCcCCCCCEEc-C---CCEEeCCCCCcCcc---ccccCCCCcCC-ccc--cccCCCCCCCCCCCEEE--cCCCCeEeECC
Confidence 68999999999 6 39999999999541 11113357896 788 99832 3899999999 99999999999
Q ss_pred CCCcccCCCCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCC--CCCCCCCeEeeCCCCccccCCCCCCCCCCCCC
Q psy11059 94 PGYKEIRDCTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSS--NPCLNDGVCVDVYKGRYCELPEIGDCSSNPCL 171 (429)
Q Consensus 94 ~Gy~~~~~C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~--~~C~~~g~C~~~~~g~~C~~~~~~~C~~~~C~ 171 (429)
+||+... +... + ....+..|+ +||+|.. ++|.++++|+++.++|.|.
T Consensus 74 ~Gy~g~~-~~~~-~--------------~~~~~~~C~--dideC~~~~~~C~~~~~C~n~~g~y~C~------------- 122 (143)
T 2bou_A 74 PGYEPVS-GAKT-F--------------KNESENTCQ--DVDECSSGQHQCDSSTVCFNTVGSYSCR------------- 122 (143)
T ss_dssp TTEEETT-CCSC-B--------------SSGGGCCEE--ECCHHHHTCCCCCTTSEEEECSSCEEEE-------------
T ss_pred CCcccCc-Cccc-c--------------ccCCCCCcC--CccCccCcCCCCCCCCEEECCCCCEEee-------------
Confidence 9998321 1100 0 012356776 8999984 7899999999999999998
Q ss_pred CCceecCCcccCCc
Q psy11059 172 NDGVCVDVYKGRYW 185 (429)
Q Consensus 172 ~~~~C~~~~~G~~c 185 (429)
|.++|+|...
T Consensus 123 ----C~~Gy~g~~~ 132 (143)
T 2bou_A 123 ----CRPGWKPRHG 132 (143)
T ss_dssp ----CCSSSCBCTT
T ss_pred ----CCCCcccCCC
Confidence 9999998654
No 22
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.44 E-value=2.1e-13 Score=135.36 Aligned_cols=118 Identities=31% Similarity=0.916 Sum_probs=96.6
Q ss_pred CCCCCcEeccCCCCCeeEeCCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCccCCCCCCCCCCCCCCCeeCCccccC
Q psy11059 234 PCQNGGKCNEDETGNYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 313 (429)
Q Consensus 234 ~C~~~g~C~~~~~~~~~C~C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~C~~~~~~~ 313 (429)
+|.++|+| .. ..+.|.|++||+|..|+. .|.++|.|..|.. .|.....|.++++|
T Consensus 204 ~C~~~G~C-~~--~~g~C~C~~G~~G~~Ce~------------~C~~g~~g~~C~~---~C~~~~~C~~~g~C------- 258 (423)
T 2gy5_A 204 ACMNNGVC-HE--DTGECICPPGFMGRTCEK------------ACELHTFGRTCKE---RCSGQEGCKSYVFC------- 258 (423)
T ss_dssp CCCTTCEE-CT--TTCCEECCTTEESTTSCE------------ECCTTEESTTSCE---ECCSTTTTTTCCEE-------
T ss_pred CCCCCCEE-EC--CCCcEeCCCCccCCCccc------------ccCCCCCCCCcCc---cCCCCCCCCCCCEE-------
Confidence 68889999 33 568999999999999985 4788898888752 46544678888888
Q ss_pred CCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCC
Q psy11059 314 TQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSIN 386 (429)
Q Consensus 314 ~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 386 (429)
..++|.|.|++||.|..|+. .|.+||+|..|+. .| +|.++++|.+.. .|.|++||+|..|+..
T Consensus 259 ~~~~~~C~C~~G~~G~~C~~-~C~~G~~G~~C~~---~C---~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 259 LPDPYGCSCATGWKGLQCNE-ACHPGFYGPDCKL---RC---SCNNGEMCDRFQ---GCLCSPGWQGLQCERE 321 (423)
T ss_dssp ETTTTEEECCBTCBSGGGCB-CCCTTBCSBTTCC---BC---CCTTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred CCCCCeEEeCCCcccccccC-ccCCCCcCCcccc---cc---cCCCCCEecCCC---ceECCCCCcCCCCccC
Confidence 45689999999999998874 4899999999963 34 688999998764 4999999999999754
No 23
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.42 E-value=1.4e-13 Score=141.08 Aligned_cols=218 Identities=21% Similarity=0.364 Sum_probs=104.3
Q ss_pred ecCCcccCCcccCCCCCCCCCCCCCCCEEeeCCCCe-eeccCCCCCCCCCCCCCCCCCCCCCCCcEeccCCCCCeeEeCC
Q psy11059 176 CVDVYKGRYWELPEIRDCTSNPCLNDGVCVDEVYKG-RYWELPEIRDCTSNPCLNDCVNPCQNGGKCNEDETGNYDCTCD 254 (429)
Q Consensus 176 C~~~~~G~~c~~~~~~~C~~~~C~~~~~C~~~~~~~-C~C~~~g~~~C~~~~C~~~~c~~C~~~g~C~~~~~~~~~C~C~ 254 (429)
|..+|+|..|+. .++.+...|+.. +++.+....+ |.| ......|...... .....+.+++.| +.|.
T Consensus 283 C~~G~~G~~Ce~-C~~g~~~~p~~~-~~c~~~~~~~~C~C-~~~~~~C~~d~~~-c~~~~~~~gg~C---------~~C~ 349 (525)
T 4aqs_A 283 CRHNTKGLNCEL-CMDFYHDLPWRP-AEGRNSNACKKCNC-NEHSSSCHFDMAV-FLATGNVSGGVC---------DNCQ 349 (525)
T ss_dssp CCTTEESSSSCE-ECTTCCSSCCCC-CBTTBCCCCCCCCC-TTSCSEEEECHHH-HHHTTSSCCEEE---------ESCC
T ss_pred CcCCCcCCCCcC-CCCccCCCccCC-CcccCCCccccccc-CCCCCCCCCCccc-ccccCccCCCcc---------cCCC
Confidence 899999999998 888888888753 5666555555 666 4433333211000 000123334444 5789
Q ss_pred CCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCccCC-----C--CCCCCCCCCCCCeeCCcc-ccCCCCCeeeeCCCCc
Q psy11059 255 ALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSVEL-----T--GCVGPDTCLNGGTCKPYL-VDETQHRFNCTCPSGY 326 (429)
Q Consensus 255 ~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~~~~-----~--~C~~~~~C~~~~~C~~~~-~~~~~~~~~C~C~~G~ 326 (429)
.+|.|..|+. |.++|.+..+.... . .|.. .....+..|.... .......+.|.|.++|
T Consensus 350 ~g~~G~~Ce~-------------C~~g~~~~~~~~~~~~~~~~~C~C~~-~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~ 415 (525)
T 4aqs_A 350 HNTMGRNCEQ-------------CKPFYFQHPERDIRDPNLCEPCTCDP-AGSENGGICDGYTDFSVGLIAGQCRCKLHV 415 (525)
T ss_dssp TTEESTTSCE-------------ECTTEEECSSSCTTCTTCEEECCCCT-TTBSGGGCCCCSCBGGGTBCSSCCCBCTTE
T ss_pred CCCCCCCccc-------------ccCcccccCCCCCCCCCCCcCCCCCC-CCCCCCccccCCCCCCcCCCCCccCCCCCC
Confidence 9999998863 23333222111000 0 0000 0000111111000 0012345679999999
Q ss_pred cCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccC----CCceEEecCCCCCCCCcc----------CCCCCCCC
Q psy11059 327 HGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNK----INGYTCVCAPGYSGKECS----------ININECES 392 (429)
Q Consensus 327 ~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~----~g~~~C~C~~G~~G~~C~----------~~~~~C~~ 392 (429)
.|..|+ .|.+||+|..+. ....|...+|...++|.+. ...+.|.|++||+|..|+ .+++.|.+
T Consensus 416 ~G~~C~--~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~ 492 (525)
T 4aqs_A 416 EGERCD--VCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRP 492 (525)
T ss_dssp ETTTTC--EECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-----------------
T ss_pred CCCccc--CCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcC
Confidence 999887 689999999886 5667776677766666543 234689999999999996 24567888
Q ss_pred CCCCCCCEEccC--CCCeeeeCCCCCCCCCCCC
Q psy11059 393 SPCLHGATCIDE--VATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 393 ~~C~~~~~C~~~--~~~~~C~C~~g~~G~~C~~ 423 (429)
.+|.+++.+... ..+++|.|++||+|.+|++
T Consensus 493 C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 493 CDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ---------------------------------
T ss_pred CCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 888888776543 3456899999999999984
No 24
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.42 E-value=2e-13 Score=135.43 Aligned_cols=130 Identities=30% Similarity=0.782 Sum_probs=102.0
Q ss_pred eeeeCCCCCCCCCCccCCCCCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCC
Q psy11059 274 YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECL 353 (429)
Q Consensus 274 ~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~ 353 (429)
+.|.|.+||+|..|+. .| .+|.++++| ...++.|.|++||.|..|+. .|.++|+|..|. ++|.
T Consensus 185 ~~c~C~~g~~G~~C~~---~C---~~C~~~G~C-------~~~~g~C~C~~G~~G~~Ce~-~C~~g~~g~~C~---~~C~ 247 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNH---LC---TACMNNGVC-------HEDTGECICPPGFMGRTCEK-ACELHTFGRTCK---ERCS 247 (423)
T ss_dssp EECSSCTTEESTTSCE---EC---CCCCTTCEE-------CTTTCCEECCTTEESTTSCE-ECCTTEESTTSC---EECC
T ss_pred cCCcCCCCCCCCCCCC---CC---CCCCCCCEE-------ECCCCcEeCCCCccCCCccc-ccCCCCCCCCcC---ccCC
Confidence 4588999999999864 34 378899999 33578999999999998873 388999999886 3565
Q ss_pred -CCCcCCCCccccCCCceEEecCCCCCCCCccCCC------CCCC-CCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCC
Q psy11059 354 -SNPCFNGATCQNKINGYTCVCAPGYSGKECSINI------NECE-SSPCLHGATCIDEVATFSCVCPKGLTGRLCETNI 425 (429)
Q Consensus 354 -~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~------~~C~-~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i 425 (429)
..+|.+++.|. .++|+|.|++||+|..|+... +.|. .-+|.++++|.+.. .|.|++||+|.+|+..+
T Consensus 248 ~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 248 GQEGCKSYVFCL--PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCEREG 322 (423)
T ss_dssp STTTTTTCCEEE--TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSCBCS
T ss_pred CCCCCCCCCEEC--CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCccCc
Confidence 35688888885 567899999999999996411 2232 22788999998764 49999999999999764
No 25
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.36 E-value=1.1e-13 Score=112.83 Aligned_cols=104 Identities=28% Similarity=0.670 Sum_probs=82.0
Q ss_pred CCCCCCCCCCCCCCCeeCCccccCC-CCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccCCC
Q psy11059 290 ELTGCVGPDTCLNGGTCKPYLVDET-QHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKIN 368 (429)
Q Consensus 290 ~~~~C~~~~~C~~~~~C~~~~~~~~-~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g 368 (429)
++++|.. ++|.+ +| ++ . .++|.|.|++||+|...+ ...|. ++|...+|. ++|++ .+
T Consensus 3 dideC~~-~pC~~--~C----~~-~~~g~y~C~C~~Gy~g~~~~---------~~~C~---~~C~~~~C~--~~C~~-~~ 59 (118)
T 1dx5_I 3 PVDPCFR-ANCEY--QC----QP-LDQTSYLCVCAEGFAPIPHE---------PHRCQ---MFCNQTACP--ADCDP-NT 59 (118)
T ss_dssp CCCGGGG-CCCSS--EE----EE-CSSSCEEEECCTTEEEETTE---------EEEEE---ECCCSSEEE--CEECT-TS
T ss_pred ccccCCC-CCCCC--CC----CC-CCCCCEEeECCCCccccCCC---------CCccc---cccCCCCCC--CcccC-CC
Confidence 5667765 88873 88 65 6 789999999999876322 12232 134555665 68888 58
Q ss_pred ceEEecCCCCC---CCCccCCCCCCCC-CCCCCCCEEccCCCCeeeeCCCCCCCC
Q psy11059 369 GYTCVCAPGYS---GKECSININECES-SPCLHGATCIDEVATFSCVCPKGLTGR 419 (429)
Q Consensus 369 ~~~C~C~~G~~---G~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~C~C~~g~~G~ 419 (429)
+|+|.|++||+ |..| ++|++|.. ++| +++|+++.++|+|.|++||+|.
T Consensus 60 ~y~C~C~~Gy~~~~g~~C-~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 60 QASCECPEGYILDDGFIC-TDIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TTCEECCTTEEEETTTEE-EECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CeEeECCCCccCCCCCcc-ccccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 89999999999 8899 58999987 899 6899999999999999999875
No 26
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.35 E-value=9.7e-14 Score=113.22 Aligned_cols=107 Identities=27% Similarity=0.609 Sum_probs=81.8
Q ss_pred CCCCCCCCCCCCCCCCCCEeccCC-CCceEEecCCCCcccccccccCcCCCCCCCCCCC--CCCCCCCCCCCCCCeEeeC
Q psy11059 6 ISLSSPCDAQRNPCQNGGKCNEDE-TGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS--NQICTTAPPCLNGATCRPQ 82 (429)
Q Consensus 6 ~~~~~~C~~~~~~C~~~g~C~~~~-~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~--~~~C~~~~~C~~~g~C~~~ 82 (429)
+.++||| ..+||++ +|+ +. .++|+|+|++||+ |..++ ++ ..+|. ..+|. ++|+
T Consensus 1 ~~dideC--~~~pC~~--~C~-~~~~g~y~C~C~~Gy~------------g~~~~--~~~C~~~C~-~~~C~--~~C~-- 56 (118)
T 1dx5_I 1 VEPVDPC--FRANCEY--QCQ-PLDQTSYLCVCAEGFA------------PIPHE--PHRCQMFCN-QTACP--ADCD-- 56 (118)
T ss_dssp CCCCCGG--GGCCCSS--EEE-ECSSSCEEEECCTTEE------------EETTE--EEEEEECCC-SSEEE--CEEC--
T ss_pred CCccccC--CCCCCCC--CCC-CCCCCCEEeECCCCcc------------ccCCC--CCccccccC-CCCCC--Cccc--
Confidence 3578999 7899985 999 88 8999999999999 54332 22 00344 45555 6898
Q ss_pred CCCCCeeeeCCCCCcccCCCCCCCCCCCCeEecCCCceeCCeeccCCCCCCCCCCCC-CCCCCCCeEeeCCCCccccCCC
Q psy11059 83 LTEQLYECVCPPGYKEIRDCTSNPCLNDGVCVWMFDVTIQVYKGRYCELPEIGDCSS-NPCLNDGVCVDVYKGRYCELPE 161 (429)
Q Consensus 83 ~~~~~~~C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~C~~~g~~G~~C~~~~i~~C~~-~~C~~~g~C~~~~~g~~C~~~~ 161 (429)
+ .++|+|.|++||+... |..|+ +||+|.. ++| +++|+++.++|.|.
T Consensus 57 ~-~~~y~C~C~~Gy~~~~-------------------------g~~C~--dideC~~~~~C--~~~C~n~~g~y~C~--- 103 (118)
T 1dx5_I 57 P-NTQASCECPEGYILDD-------------------------GFICT--DIDECENGGFC--SGVCHNLPGTFECI--- 103 (118)
T ss_dssp T-TSTTCEECCTTEEEET-------------------------TTEEE--ECCHHHHCSSC--SSEEEECSSSEEEE---
T ss_pred C-CCCeEeECCCCccCCC-------------------------CCccc--cccccCCCCCC--cCeEEeCCCCEEEE---
Confidence 6 5889999999976210 45664 8899987 889 67999999999998
Q ss_pred CCCCCCCCCCCCceecCCcccC
Q psy11059 162 IGDCSSNPCLNDGVCVDVYKGR 183 (429)
Q Consensus 162 ~~~C~~~~C~~~~~C~~~~~G~ 183 (429)
|..||+|.
T Consensus 104 --------------C~~G~~g~ 111 (118)
T 1dx5_I 104 --------------CGPDSALA 111 (118)
T ss_dssp --------------ECSSSSCE
T ss_pred --------------CCCCCccC
Confidence 99999874
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.34 E-value=6.8e-13 Score=102.76 Aligned_cols=87 Identities=28% Similarity=0.609 Sum_probs=68.7
Q ss_pred CeeeeCCCCCCCCCCccCCCCCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCc-cCCCc
Q psy11059 273 GYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCD-VDFDE 351 (429)
Q Consensus 273 ~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~-~~i~~ 351 (429)
+|+|.|.+||+|..|+ +++|.. .+|.+ ..++|.|.|++||. .|+ +++++
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~~-~pC~n-----------~~~~y~C~C~~G~~----------------~C~~~~~~~ 50 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSWL-RPVLR-----------SNRVEYCWCNSGRA----------------QCHSVPVKS 50 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEEE-EECSS-----------SSCEEEEECSSSCC----------------BCCEECEEE
T ss_pred CeeeECCCCCcCCeEC--CCcccC-Ccccc-----------CCCCcEeECCCCCc----------------ccccCcCCc
Confidence 4788888888888773 445544 44432 45678999998885 343 47899
Q ss_pred CCCCCcCCCCccccCC--CceEEecCCCCCCCCccCCCCC
Q psy11059 352 CLSNPCFNGATCQNKI--NGYTCVCAPGYSGKECSININE 389 (429)
Q Consensus 352 C~~~~C~~~~~C~~~~--g~~~C~C~~G~~G~~C~~~~~~ 389 (429)
|..+||.++++|++.. ++|+|.|++||+|+.|++++++
T Consensus 51 C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 51 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred ccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCCC
Confidence 9999999999999987 8999999999999999888775
No 28
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.34 E-value=7.7e-13 Score=100.44 Aligned_cols=72 Identities=26% Similarity=0.709 Sum_probs=63.5
Q ss_pred CCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCC
Q psy11059 7 SLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQ 86 (429)
Q Consensus 7 ~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~ 86 (429)
.++|||+. ++||.+ |+|+ ++.++|+|.|++||+++ |..|+ +++ +|...++|.+ ++|+ ++.+
T Consensus 3 ~dideC~~-~~~C~~-g~C~-n~~g~y~C~C~~Gy~~~----------g~~C~-did--eC~~~~~C~~-~~C~--n~~g 63 (82)
T 1emn_A 3 VDMDECKE-PDVCKH-GQCI-NTDGSYRCECPFGYILA----------GNECV-DTD--ECSVGNPCGN-GTCK--NVIG 63 (82)
T ss_dssp CCCCSSSS-TTSCSS-SEEC-CCSSCCCEECCTTEEEE----------TTEEE-ECC--GGGTCCTTSS-SCEE--ECSS
T ss_pred CccccCCC-CCCcCC-CEEE-ecCCCEEEECCCCeECC----------CCccC-Ccc--cccCCCCCCC-CEeE--CCCC
Confidence 47899953 689986 8999 99999999999999865 99995 888 9975688986 6999 9999
Q ss_pred CeeeeCCCCCc
Q psy11059 87 LYECVCPPGYK 97 (429)
Q Consensus 87 ~~~C~C~~Gy~ 97 (429)
+|+|.|++||+
T Consensus 64 ~y~C~C~~G~~ 74 (82)
T 1emn_A 64 GFECTCEEGFE 74 (82)
T ss_dssp SEEECCSSSSC
T ss_pred CEEeECCCCeE
Confidence 99999999998
No 29
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.32 E-value=5.4e-14 Score=119.54 Aligned_cols=118 Identities=26% Similarity=0.713 Sum_probs=87.6
Q ss_pred cCCCCCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCc-------ccccCCCccCCCCccCCCcCCCCCcCCCC
Q psy11059 289 VELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE-------KCFCRPGFAGDHCDVDFDECLSNPCFNGA 361 (429)
Q Consensus 289 ~~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~-------~C~C~~g~~g~~C~~~i~~C~~~~C~~~~ 361 (429)
.++++|.. ++|.+ ++| ++ +.++|.|.|++||+|..+. ...|..+|.|..|+.++++|.. .+
T Consensus 2 ~dideC~~-~pC~n-g~C----~n-~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~-----~~ 69 (147)
T 2w86_A 2 ADIDECES-SPCIN-GVC----KN-SPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATL-----KS 69 (147)
T ss_dssp CCCCGGGG-CCSBT-SEE----EE-ETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEEC-----HH
T ss_pred CcCccCcC-CCCCC-CEe----EC-CCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCcccc-----CC
Confidence 46778887 89975 699 65 7889999999999976543 1235556667777766665532 12
Q ss_pred ccccCCC----------ceEEecCCCCC---CCCccCCCCCCCC--CCCCCCCEEccCCCCeeeeCCCCCCCCC
Q psy11059 362 TCQNKIN----------GYTCVCAPGYS---GKECSININECES--SPCLHGATCIDEVATFSCVCPKGLTGRL 420 (429)
Q Consensus 362 ~C~~~~g----------~~~C~C~~G~~---G~~C~~~~~~C~~--~~C~~~~~C~~~~~~~~C~C~~g~~G~~ 420 (429)
.|.+..+ .|.|.|++||+ |..|+ +||+|.. .+|.+ ++|+++.++|+|.|++||+|..
T Consensus 70 ~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 70 QCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp HHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred ccccCcCcccCCCcccCCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 2322222 27889999995 89996 8999984 45986 5999999999999999999764
No 30
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-12 Score=100.71 Aligned_cols=77 Identities=34% Similarity=0.873 Sum_probs=69.1
Q ss_pred CCCcCCCCC--cCCCCccccCCCceEEecCCCCC----CCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCC
Q psy11059 348 DFDECLSNP--CFNGATCQNKINGYTCVCAPGYS----GKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLC 421 (429)
Q Consensus 348 ~i~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C 421 (429)
+|++|..+| | ++++|++.+++|+|.|++||+ |..|+ ++++|...+|. ++|+++.++|+|.|+ ||.|..+
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~ 76 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKL 76 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcc
Confidence 689998877 8 789999999999999999998 88995 89999988997 699999999999998 8888888
Q ss_pred CCCCCCCC
Q psy11059 422 ETNIDDCE 429 (429)
Q Consensus 422 ~~~i~~C~ 429 (429)
+.++..|+
T Consensus 77 ~~~~~~C~ 84 (87)
T 1z6c_A 77 AQDQKSCE 84 (87)
T ss_dssp CTTSSSCB
T ss_pred cCCCCcce
Confidence 88877773
No 31
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.26 E-value=9.5e-14 Score=117.99 Aligned_cols=125 Identities=28% Similarity=0.551 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccc---------cccCcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy11059 7 SLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVG---------LANQTLGSIHCETPISNQICTTAPPCLNGA 77 (429)
Q Consensus 7 ~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~---------~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g 77 (429)
.++||| +++||.+ |+|+ ++.++|+|+|++||+|+..+ .|..++.|..|+.+++ +|. .++
T Consensus 2 ~dideC--~~~pC~n-g~C~-n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~--~c~------~~~ 69 (147)
T 2w86_A 2 ADIDEC--ESSPCIN-GVCK-NSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININ--GAT------LKS 69 (147)
T ss_dssp CCCCGG--GGCCSBT-SEEE-EETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEE--EEE------CHH
T ss_pred CcCccC--cCCCCCC-CEeE-CCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCC--ccc------cCC
Confidence 368999 6799986 7999 99999999999999955210 1112222333333222 221 111
Q ss_pred eEeeCCCCCCeeeeCCCCCcccCCCCCCCCCCCCeEecCCCce-eCCee---ccCCCCCCCCCCCCCC--CCCCCeEeeC
Q psy11059 78 TCRPQLTEQLYECVCPPGYKEIRDCTSNPCLNDGVCVWMFDVT-IQVYK---GRYCELPEIGDCSSNP--CLNDGVCVDV 151 (429)
Q Consensus 78 ~C~~~~~~~~~~C~C~~Gy~~~~~C~~~~C~~~g~C~~~~~C~-~~g~~---G~~C~~~~i~~C~~~~--C~~~g~C~~~ 151 (429)
.|. +..+++ . ..+|. .|. ..|. ++||+ |..|+ +||||..+| |.+ ++|+++
T Consensus 70 ~C~--~~~g~~---------~-----g~~C~---~c~--~~C~C~~Gy~~~~g~~C~--dideC~~~~~~C~~-g~C~n~ 125 (147)
T 2w86_A 70 QCC--SSLGAA---------W-----GSPCT---LCQ--VDPICGKGYSRIKGTQCE--DIDECEVFPGVCKN-GLCVNT 125 (147)
T ss_dssp HHH--TTTCSE---------E-----TTTTE---ECC--CCTTTCTTEEEEETTEEE--ECCHHHHSTTCSSS-SEEEEE
T ss_pred ccc--cCcCcc---------c-----CCCcc---cCC--CcccCCCccccCCCCccC--ccccccCCCCCCCC-CEEECC
Confidence 122 111110 0 00110 010 1155 66774 88898 899998554 986 599999
Q ss_pred CCCccccCCCCCCCCCCCCCCCceecCCcccCC
Q psy11059 152 YKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRY 184 (429)
Q Consensus 152 ~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~G~~ 184 (429)
.++|.|. |..||+|..
T Consensus 126 ~g~y~C~-----------------C~~Gy~g~~ 141 (147)
T 2w86_A 126 RGSFKCQ-----------------CPSGMTLDA 141 (147)
T ss_dssp TTEEEEE-----------------CCTTCCBCT
T ss_pred CCCEEee-----------------CCCCCccCC
Confidence 9999998 999998753
No 32
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.24 E-value=5.1e-12 Score=95.85 Aligned_cols=70 Identities=36% Similarity=0.925 Sum_probs=62.9
Q ss_pred CCCcCCC-CCcCCCCccccCCCceEEecCCCCC--CCCccCCCCCCC-CCCCCCCCEEccCCCCeeeeCCCCCCCCC
Q psy11059 348 DFDECLS-NPCFNGATCQNKINGYTCVCAPGYS--GKECSININECE-SSPCLHGATCIDEVATFSCVCPKGLTGRL 420 (429)
Q Consensus 348 ~i~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~g~~G~~ 420 (429)
+|++|.. .||.+ ++|++..++|+|.|++||+ |..| +++++|. .++|.+ ++|+++.++|+|.|++||+|..
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C-~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNEC-VDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEE-EECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCcc-CCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 7899985 78975 8999999999999999997 8999 4899997 788986 5999999999999999999863
No 33
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.21 E-value=1.1e-12 Score=113.24 Aligned_cols=113 Identities=28% Similarity=0.722 Sum_probs=74.6
Q ss_pred CCCCCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCc--CCCC--Cc--CCCCcc
Q psy11059 290 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDE--CLSN--PC--FNGATC 363 (429)
Q Consensus 290 ~~~~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~--C~~~--~C--~~~~~C 363 (429)
++++|...++|. +++| ++ +.++|+|.|++||++.. .|..|+ ++++ |... +| ..+++|
T Consensus 2 dideC~~~~~C~-~~~C----~n-~~gsy~C~C~~Gy~~~~----------~g~~C~-d~~~~~C~~~~~~c~~~~~~~C 64 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNC----VN-TPGSYICDCPPDFELNP----------TRVGCV-DTRSGNCYLDIRPRGDNGDTAC 64 (162)
T ss_dssp CCCGGGSTTSSB-TSEE----EE-ETTEEEEECCTTCEECT----------TSSBEE-CCCCEEEEEEC----------C
T ss_pred ccccCCCCCCCC-CCEe----EC-CCCCEEEeCCCCCeECC----------CCCccc-CCCCCcccCCCcccCCCCCCcc
Confidence 466777447886 6899 65 78999999999998431 244554 5554 6432 23 245667
Q ss_pred ccCCC----ceEEecCCCC---------------------------CCC---CccCCCCCCCC--CCCCCCCEEccCCCC
Q psy11059 364 QNKIN----GYTCVCAPGY---------------------------SGK---ECSININECES--SPCLHGATCIDEVAT 407 (429)
Q Consensus 364 ~~~~g----~~~C~C~~G~---------------------------~G~---~C~~~~~~C~~--~~C~~~~~C~~~~~~ 407 (429)
++..+ +|+|.|++|| ++. .+.++||+|.. .+|.+ ++|+++.++
T Consensus 65 ~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gs 143 (162)
T 1uzk_A 65 SNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGS 143 (162)
T ss_dssp EEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSC
T ss_pred cCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCC
Confidence 66555 4556555554 432 12258999975 46986 699999999
Q ss_pred eeeeCCCCCCCCC
Q psy11059 408 FSCVCPKGLTGRL 420 (429)
Q Consensus 408 ~~C~C~~g~~G~~ 420 (429)
|+|.|++||+|..
T Consensus 144 y~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 144 FQCRCPTGYYLNE 156 (162)
T ss_dssp EEEECCTTCCBCT
T ss_pred EEeeCCCCccCCC
Confidence 9999999999864
No 34
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.21 E-value=1.1e-11 Score=100.32 Aligned_cols=72 Identities=28% Similarity=0.661 Sum_probs=56.2
Q ss_pred CCCCCCCCCCCC--------CCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCCCCCC
Q psy11059 7 SLSSPCDAQRNP--------CQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPCLNGA 77 (429)
Q Consensus 7 ~~~~~C~~~~~~--------C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C~~~g 77 (429)
.++||| ..+| |.++|+|+ +..++|+|.|++||+ |..|+..++.++|. ....|.+
T Consensus 4 ~d~d~C--~~~p~~~~C~~~C~~~g~C~-~~~~~y~C~C~~G~~------------G~~C~~~~~~~~C~~~~~~C~~-- 66 (114)
T 1aut_L 4 VDGDQC--LVLPLEHPCASLCCGHGTCI-DGIGSFSCDCRSGWE------------GRFCQREVSFLNCSLDNGGCTH-- 66 (114)
T ss_dssp ----CC--CCCSSCCSSSSTTTTSEEEC-CCSSCCCEEECTTEE------------STTSCEECCSSSSSSGGGGCSS--
T ss_pred eecccc--cCCCccccccccCCCcCCCC-CCCCCcEeeCCCCCc------------CCCcCcCCcCCcCcCCCCCCCC--
Confidence 468899 6788 99999999 999999999999999 88998543212676 1234544
Q ss_pred eEeeCCCCCCeeeeCCCCCc
Q psy11059 78 TCRPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 78 ~C~~~~~~~~~~C~C~~Gy~ 97 (429)
+|+ ++.++|+|.|++||+
T Consensus 67 ~C~--n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 67 YCL--EEVGWRRCSCAPGYK 84 (114)
T ss_dssp EEE--ECSSSEEEECCTTEE
T ss_pred EeE--CCCCCEEeECCCCee
Confidence 999 999999999999998
No 35
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.20 E-value=1.1e-11 Score=128.72 Aligned_cols=138 Identities=28% Similarity=0.667 Sum_probs=99.1
Q ss_pred CCCCCCcEeccCCCCCeeEeCCCCCcCCCCCC-----------CccccCC------C-----CeeeeCC------CCCCC
Q psy11059 233 NPCQNGGKCNEDETGNYDCTCDALHTGDPCKH-----------GSCVDKR------A-----GYFCDCP------PTYGG 284 (429)
Q Consensus 233 ~~C~~~g~C~~~~~~~~~C~C~~g~~G~~C~~-----------~~C~~~~------~-----~~~C~C~------~G~~g 284 (429)
.+|.++|+| . .+.|.|++||+|..|+. ..|.... + ..+|.|+ +||+|
T Consensus 435 ~~Cs~~G~C-~----~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 435 SLCHGKGFL-E----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYG 509 (687)
T ss_dssp STGGGSEEE-S----SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCEES
T ss_pred CCCCCCCEE-e----CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCccc
Confidence 579899999 3 46899999999999982 1244221 0 1378999 99999
Q ss_pred CCCccCCCCCCCC--CCCCC--CCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCCCcCCCC---Cc
Q psy11059 285 KNCSVELTGCVGP--DTCLN--GGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSN---PC 357 (429)
Q Consensus 285 ~~c~~~~~~C~~~--~~C~~--~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i~~C~~~---~C 357 (429)
..|+.+...|... .+|.+ +|+| .. ..|.|++||+|..|+ |+ .+++.|... +|
T Consensus 510 ~~Ce~~~~~C~~~~~~~C~~~~~G~C----~~-----g~C~C~~G~~G~~Ce---c~---------~~~~~C~~~~g~~C 568 (687)
T 3k6s_B 510 QYCECDTINCERYNGQVCGGPGRGLC----FC-----GKCRCHPGFEGSACQ---CE---------RTTEGCLNPRRVEC 568 (687)
T ss_dssp TTSCEESSCSCEETTEETSHHHHEEE----ET-----TEEEECTTCCSTTSC---SC---------CSSCTTBCTTCSBT
T ss_pred cccccccccccCCCCcCcCCCCCCeE----EC-----CEEEcCCCCcCCCCc---cC---------CCCCCCCCCCCCCC
Confidence 9998767778641 35777 7787 22 378888888777654 11 234566553 79
Q ss_pred CCCCccccCCCceEEecCCCCCCCCccCCCCCCCCCCCCCCCEEc
Q psy11059 358 FNGATCQNKINGYTCVCAPGYSGKECSININECESSPCLHGATCI 402 (429)
Q Consensus 358 ~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~ 402 (429)
.++|+|+. ++|.|++||+|+.|+. ...| +.+|.+++.|+
T Consensus 569 s~~G~C~~----g~C~C~~Gy~G~~Ce~-c~~C-~~~C~~~g~Cv 607 (687)
T 3k6s_B 569 SGRGRCRC----NVCECHSGYQLPLCQE-CPGC-PSPCGKYISCA 607 (687)
T ss_dssp SSSCCBCS----SCBCCSTTCCTTTTCC-CTTS-CCCCTTTHHHH
T ss_pred CCCCcCCC----CEEECCCCCcCCCCCC-CCCC-CcccCCCCCCC
Confidence 99999987 3799999999999974 2356 46788888775
No 36
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.19 E-value=7.2e-12 Score=130.22 Aligned_cols=143 Identities=22% Similarity=0.491 Sum_probs=106.8
Q ss_pred CCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCC-------CCCCC---CCCCCCCCeEeeCCC
Q psy11059 15 QRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISN-------QICTT---APPCLNGATCRPQLT 84 (429)
Q Consensus 15 ~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~-------~~C~~---~~~C~~~g~C~~~~~ 84 (429)
.+.+|+++|+|. .++|.|.+||+ |..|+.+++. ..|.. ..+|.++|+|+ ..
T Consensus 433 ~s~~Cs~~G~C~-----~g~C~C~~Gy~------------G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G 493 (687)
T 3k6s_B 433 DRSLCHGKGFLE-----CGICRCDTGYI------------GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CG 493 (687)
T ss_dssp CSSTGGGSEEES-----SSSEEECSSEE------------STTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TT
T ss_pred CCCCCCCCCEEe-----CCEeEcCCCCc------------CCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CC
Confidence 356899999998 46899999999 8888743320 13651 24599999999 42
Q ss_pred CCCeeeeCC------CCCc------ccCCCCC---CCCCC--CCeEecCCCce-eCCeeccCCCCC-CCCCCCCC---CC
Q psy11059 85 EQLYECVCP------PGYK------EIRDCTS---NPCLN--DGVCVWMFDVT-IQVYKGRYCELP-EIGDCSSN---PC 142 (429)
Q Consensus 85 ~~~~~C~C~------~Gy~------~~~~C~~---~~C~~--~g~C~~~~~C~-~~g~~G~~C~~~-~i~~C~~~---~C 142 (429)
+|.|+ +||+ ++..|.. .+|.+ +|+|+.. .|. .+||+|..|+.. +++.|... +|
T Consensus 494 ----~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g-~C~C~~G~~G~~Cec~~~~~~C~~~~g~~C 568 (687)
T 3k6s_B 494 ----QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG-KCRCHPGFEGSACQCERTTEGCLNPRRVEC 568 (687)
T ss_dssp ----EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETT-EEEECTTCCSTTSCSCCSSCTTBCTTCSBT
T ss_pred ----EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECC-EEEcCCCCcCCCCccCCCCCCCCCCCCCCC
Confidence 89999 9998 3667873 46988 9999853 299 999999999831 36788764 79
Q ss_pred CCCCeEeeCCCCccccCCCCCCCCCCCCCCCceecCCcccCCcccCCCCCCCCCCCCCCCEEe
Q psy11059 143 LNDGVCVDVYKGRYCELPEIGDCSSNPCLNDGVCVDVYKGRYWELPEIRDCTSNPCLNDGVCV 205 (429)
Q Consensus 143 ~~~g~C~~~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~G~~c~~~~~~~C~~~~C~~~~~C~ 205 (429)
.++|+|+. ..|. |.+||+|..|+. ...|. ++|.++++|+
T Consensus 569 s~~G~C~~----g~C~-----------------C~~Gy~G~~Ce~--c~~C~-~~C~~~g~Cv 607 (687)
T 3k6s_B 569 SGRGRCRC----NVCE-----------------CHSGYQLPLCQE--CPGCP-SPCGKYISCA 607 (687)
T ss_dssp SSSCCBCS----SCBC-----------------CSTTCCTTTTCC--CTTSC-CCCTTTHHHH
T ss_pred CCCCcCCC----CEEE-----------------CCCCCcCCCCCC--CCCCC-cccCCCCCCC
Confidence 99999976 3466 999999999984 23453 4677666665
No 37
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.18 E-value=1e-11 Score=104.67 Aligned_cols=75 Identities=31% Similarity=0.576 Sum_probs=63.3
Q ss_pred cccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCC---eE
Q psy11059 3 FKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGA---TC 79 (429)
Q Consensus 3 ~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g---~C 79 (429)
+....++|+| .++||+++|+|+ +..++|+|.|++||+ |..|+.+++ +|. ..++.+++ +|
T Consensus 41 ~~~c~did~C--~~~pC~n~g~C~-~~~g~y~C~C~~G~~------------G~~C~~~~~--~c~-~c~~~~~~C~~~C 102 (142)
T 2c4f_L 41 WISYSDGDQC--ASSPCQNGGSCK-DQLQSYICFCLPAFE------------GRNCETHKD--DQL-ICVNENGGCEQYC 102 (142)
T ss_dssp HHHHTTCCGG--GGCCCCTTCEEE-EETTEEEEECCTTEE------------STTSCEEGG--GCC-STTTGGGGCSSEE
T ss_pred cccCCccCcC--cCCCcCCCCEEe-CCCCCEEeeCCCCcc------------CCccccCcc--ccc-cccCCCCCccCEe
Confidence 3445689999 689999999999 999999999999999 999986566 665 44555555 99
Q ss_pred eeCCCCC-CeeeeCCCCCc
Q psy11059 80 RPQLTEQ-LYECVCPPGYK 97 (429)
Q Consensus 80 ~~~~~~~-~~~C~C~~Gy~ 97 (429)
+ ++.+ +|+|.|++||+
T Consensus 103 ~--~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 103 S--DHTGTKRSCRCHEGYS 119 (142)
T ss_dssp E--CCTTSCCEEECCTTEE
T ss_pred E--CCCCCCEEEECCCCce
Confidence 9 9898 99999999997
No 38
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.17 E-value=5.2e-12 Score=96.78 Aligned_cols=75 Identities=29% Similarity=0.713 Sum_probs=61.1
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCCCCCCeEeeCCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPCLNGATCRPQLTEQ 86 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C~~~g~C~~~~~~~ 86 (429)
++|||+..+++|.+ |+|+ ++.++|+|.|++||++. ...|..|+ +++ +|. ....|. +++|+ ++.+
T Consensus 2 dideC~~~~~~C~~-g~C~-n~~g~y~C~C~~Gy~~~-------~~~g~~C~-did--eC~~~~~~C~-~~~C~--n~~g 66 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCV-NTPGDFECKCDEGYESG-------FMMMKNCM-DID--ECQRDPLLCR-GGVCH--NTEG 66 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEE-EETTEEEECCCSSEEEC-------TTTSSSEE-ECC--HHHHCSSTTT-TSEEE--EETT
T ss_pred ccccccCCCCCCCC-CEEE-CCCCCEEeeCCCCcCcc-------CCCCCccC-Ccc--cccCCCCcCC-CCEeE--cCCC
Confidence 68999655566975 6999 99999999999999832 12378897 888 998 233476 58999 9999
Q ss_pred CeeeeCCCCCc
Q psy11059 87 LYECVCPPGYK 97 (429)
Q Consensus 87 ~~~C~C~~Gy~ 97 (429)
+|+|.|++||+
T Consensus 67 ~y~C~C~~G~~ 77 (86)
T 1lmj_A 67 SYRCECPPGHQ 77 (86)
T ss_dssp EEEEESCTTSC
T ss_pred CEEEECcCCcc
Confidence 99999999998
No 39
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.16 E-value=1.3e-11 Score=106.17 Aligned_cols=126 Identities=27% Similarity=0.638 Sum_probs=88.8
Q ss_pred CCCCCcEeccCC-CCCeeE-eCCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCcc--CCCCCCCCCCCCCC------
Q psy11059 234 PCQNGGKCNEDE-TGNYDC-TCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSV--ELTGCVGPDTCLNG------ 303 (429)
Q Consensus 234 ~C~~~g~C~~~~-~~~~~C-~C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~~--~~~~C~~~~~C~~~------ 303 (429)
+|.++++|.... .+.++| .|+++|+|..|+ .|.+||+|..+.. ....|.. -.|.++
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce-------------~C~~g~~g~~~~~~~~~~~C~~-C~C~~~~~~~~~ 67 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE-------------LCDDGYFGDPLGSNGPVRLCRP-CQCNDNIDPNAV 67 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC-------------EECTTEEEETTCTTSSCEEEEE-CCSTTCBCTTCS
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc-------------CCCCCCcCCcccccCCCCCCee-CcCCCCCCcccC
Confidence 578889994333 367899 799999999998 4888988865431 1123443 455544
Q ss_pred CeeCCccccCCCCCeeee-CCCCccCCCCcccccCCCccCCCCc-cCCCcCCCCCcCCCC------ccccCCCceEEecC
Q psy11059 304 GTCKPYLVDETQHRFNCT-CPSGYHGKICEKCFCRPGFAGDHCD-VDFDECLSNPCFNGA------TCQNKINGYTCVCA 375 (429)
Q Consensus 304 ~~C~~~~~~~~~~~~~C~-C~~G~~G~~C~~C~C~~g~~g~~C~-~~i~~C~~~~C~~~~------~C~~~~g~~~C~C~ 375 (429)
+.| ...++.|+ |+++|+|.+|+ +|++||+|..+. ...+.|..-+|...+ +|....| +|.|+
T Consensus 68 ~~C-------~~~tG~C~~C~~g~~G~~Ce--~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~ 136 (162)
T 1klo_A 68 GNC-------NRLTGECLKCIYNTAGFYCD--RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTG--QCQCL 136 (162)
T ss_dssp CCB-------CTTTCCBCCBCTTEETTTTC--EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTC--CCCBC
T ss_pred Ccc-------cCCCCcccCCCCCCcCCCcC--cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCC--EeECC
Confidence 355 33467895 99999999999 589999998875 233455554565543 6765443 88999
Q ss_pred CCCCCCCcc
Q psy11059 376 PGYSGKECS 384 (429)
Q Consensus 376 ~G~~G~~C~ 384 (429)
++|+|+.|+
T Consensus 137 ~g~~G~~Cd 145 (162)
T 1klo_A 137 PHVSGRDCG 145 (162)
T ss_dssp TTEESTTCC
T ss_pred CCCcCCCCC
Confidence 999998884
No 40
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.16 E-value=1.1e-11 Score=94.92 Aligned_cols=69 Identities=36% Similarity=0.936 Sum_probs=60.4
Q ss_pred CCCcCCCCC--cCCCCccccCCCceEEecCCCCC-----CCCccCCCCCCCCCC--CCCCCEEccCCCCeeeeCCCCCCC
Q psy11059 348 DFDECLSNP--CFNGATCQNKINGYTCVCAPGYS-----GKECSININECESSP--CLHGATCIDEVATFSCVCPKGLTG 418 (429)
Q Consensus 348 ~i~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~-----G~~C~~~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~g~~G 418 (429)
+|++|...| |.+ ++|++++++|+|.|++||+ |..|+ +|++|...+ |. +++|+++.++|+|.|++||++
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 689998766 865 5999999999999999997 78895 899998666 65 579999999999999999997
Q ss_pred C
Q psy11059 419 R 419 (429)
Q Consensus 419 ~ 419 (429)
.
T Consensus 79 ~ 79 (86)
T 1lmj_A 79 S 79 (86)
T ss_dssp C
T ss_pred C
Confidence 6
No 41
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.15 E-value=1.5e-11 Score=104.01 Aligned_cols=74 Identities=30% Similarity=0.771 Sum_probs=58.1
Q ss_pred ccccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCC-CCCCCCCCeE-
Q psy11059 2 YFKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTT-APPCLNGATC- 79 (429)
Q Consensus 2 ~~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~-~~~C~~~g~C- 79 (429)
||....++|+| .++||.++|+|+ +..++|+|.|++||+ |..|+ +++ +|.. ..+|.+ +|
T Consensus 41 ~~~~c~dideC--~~~pC~n~g~C~-~~~~~y~C~C~~G~~------------G~~C~-~~d--eC~~~~~~C~~--~C~ 100 (146)
T 1x7a_L 41 FWKQYVDGDQC--EPNPCLNGGLCK-DDINSYECWCQVGFE------------GKNCE-LDA--TCNIKNGRCKQ--FCK 100 (146)
T ss_dssp ---------CC--SSCSSCTTCEEE-ECSSCEEEECCSSEE------------STTTC-EEC--CTTSGGGSCSS--BCC
T ss_pred hhccCCCcCcC--CCCCCCCCCEeE-CCCCCEEEecCCCCc------------CCcCC-CCc--cccCCCCCCcC--CCC
Confidence 34456679999 789999999999 999999999999999 99998 457 8982 346776 89
Q ss_pred eeCCCCCCeeeeCCCCCc
Q psy11059 80 RPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 80 ~~~~~~~~~~C~C~~Gy~ 97 (429)
+ ++.++|+|.|++||+
T Consensus 101 ~--n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 101 T--GADSKVLCSCTTGYR 116 (146)
T ss_dssp C--CSSSCCCCBCCTTEE
T ss_pred C--CCCCCEEeEcCCCcE
Confidence 8 899999999999987
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.15 E-value=1.4e-11 Score=103.75 Aligned_cols=77 Identities=31% Similarity=0.813 Sum_probs=67.5
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCCCCCCCCCCCCCC---EEccCCC-CeeeeCCCCCC----CC
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSININECESSPCLHGA---TCIDEVA-TFSCVCPKGLT----GR 419 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~---~C~~~~~-~~~C~C~~g~~----G~ 419 (429)
+|++|..+||.++++|++..++|+|.|++||+|..|+.+++++...++.+++ +|+++.+ +|+|.|++||+ |.
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~ 125 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 125 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSS
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCC
Confidence 7899999999999999999999999999999999998656776555555555 9999999 99999999999 99
Q ss_pred CCCCC
Q psy11059 420 LCETN 424 (429)
Q Consensus 420 ~C~~~ 424 (429)
.|+..
T Consensus 126 ~C~~~ 130 (142)
T 2c4f_L 126 SCTPT 130 (142)
T ss_dssp CEEES
T ss_pred CCCCC
Confidence 99743
No 43
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.14 E-value=1.4e-11 Score=104.14 Aligned_cols=76 Identities=33% Similarity=0.837 Sum_probs=63.6
Q ss_pred CCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCCCCCCCC--CCCCCCEE-ccCCCCeeeeCCCCCC---
Q psy11059 344 HCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSININECESS--PCLHGATC-IDEVATFSCVCPKGLT--- 417 (429)
Q Consensus 344 ~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~--~C~~~~~C-~~~~~~~~C~C~~g~~--- 417 (429)
.|. +|++|..+||.++++|++..++|+|.|++||+|..|+ ++++|... +|.+ +| +++.++|+|.|++||+
T Consensus 44 ~c~-dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~ 119 (146)
T 1x7a_L 44 QYV-DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAP 119 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECT
T ss_pred cCC-CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCC
Confidence 343 8999999999999999999999999999999999996 56899864 5765 89 9999999999999999
Q ss_pred -CCCCCC
Q psy11059 418 -GRLCET 423 (429)
Q Consensus 418 -G~~C~~ 423 (429)
|..|+.
T Consensus 120 dG~~C~~ 126 (146)
T 1x7a_L 120 DQKSCKP 126 (146)
T ss_dssp TSSSEEE
T ss_pred CCCcCCC
Confidence 899973
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.14 E-value=6e-12 Score=110.91 Aligned_cols=75 Identities=31% Similarity=0.754 Sum_probs=24.5
Q ss_pred ccccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCC-CCCCCCC-CCCCCCCCeE
Q psy11059 2 YFKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPI-SNQICTT-APPCLNGATC 79 (429)
Q Consensus 2 ~~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~-~~~~C~~-~~~C~~~g~C 79 (429)
||....++|+| .++||+++|+|+ +..++|+|.|++||+ |..|+.++ + +|.. ..+|.+ +|
T Consensus 35 fw~~c~dideC--~~~pC~ngg~C~-n~~g~y~C~C~~Gf~------------G~~Ce~~i~d--eC~~~~~~C~~--~C 95 (195)
T 1nfu_B 35 FWNKYKDGDQC--ETSPCQNQGKCK-DGLGEYTCTCLEGFE------------GKNCELFTRK--LCSLDNGDCDQ--FC 95 (195)
T ss_dssp -------------------------------------------------------------CC--GGGTGGGGCSS--EE
T ss_pred ccccCCCCccc--CCCCCCCCCEeE-CCCCCeeEeCCCCce------------eccccccccc--cccCCCCCCCC--Ee
Confidence 45556789999 789999999999 999999999999999 99999767 7 8982 356876 99
Q ss_pred eeCCCCCCeeeeCCCCCc
Q psy11059 80 RPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 80 ~~~~~~~~~~C~C~~Gy~ 97 (429)
+ ++.++|+|.|++||+
T Consensus 96 ~--n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 96 H--EEQNSVVCSCARGYT 111 (195)
T ss_dssp E--EETTEEEEECCTTEE
T ss_pred E--CCCCCeEEECCCCce
Confidence 9 999999999999988
No 45
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.10 E-value=2.8e-11 Score=92.85 Aligned_cols=72 Identities=26% Similarity=0.624 Sum_probs=60.2
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQL 87 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~ 87 (429)
++|||+..+.+| ++++|+ +..++|+|.|++||++. ..|..|+ +++ +|. .++|. ++|+ ++.++
T Consensus 2 dideC~~~~~~C-~~~~C~-n~~g~y~C~C~~G~~~~--------~~g~~C~-did--eC~-~~~C~--~~C~--n~~g~ 63 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCK-NIPGDFECECPEGYRYN--------LKSKSCE-DID--ECS-ENMCA--QLCV--NYPGG 63 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCC-CBTTBCCCSSSTTCEEE--------TTTTEEE-CCC--HHH-HSCCS--SEEC--CCSSS
T ss_pred ccccccCCCCCC-CCCEeE-CCCCCEEEECCCCceEC--------CCCCcCC-CcC--eeC-CCCCC--CEEE--ccCCC
Confidence 689995444449 889999 99999999999999943 3478896 888 998 78997 6999 99999
Q ss_pred eeeeC--CCCCc
Q psy11059 88 YECVC--PPGYK 97 (429)
Q Consensus 88 ~~C~C--~~Gy~ 97 (429)
|+|.| .+||+
T Consensus 64 y~C~C~g~~G~~ 75 (87)
T 1z6c_A 64 YTCYCDGKKGFK 75 (87)
T ss_dssp CCEECCSSSCCB
T ss_pred EEEECCCCcCCc
Confidence 99999 47776
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.08 E-value=1.3e-11 Score=102.83 Aligned_cols=75 Identities=31% Similarity=0.754 Sum_probs=24.2
Q ss_pred ccccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCC-CCCCCCC-CCCCCCCCeE
Q psy11059 2 YFKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPI-SNQICTT-APPCLNGATC 79 (429)
Q Consensus 2 ~~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~-~~~~C~~-~~~C~~~g~C 79 (429)
|+....++|+| .++||+++|+|+ +..++|+|.|++||+ |..|+.++ + +|.. ..+|.+ +|
T Consensus 35 ~~~~c~d~d~C--~~~pC~n~g~C~-~~~~~y~C~C~~G~~------------G~~C~~~i~d--~C~~~~~~C~~--~C 95 (134)
T 2vh0_B 35 FWNKYKDGDQC--ETSPCQNQGKCK-DGLGEYTCTCLEGFE------------GKNCELFTRK--LCSLDNGDCDQ--FC 95 (134)
T ss_dssp -------------------------------------------------------------CC--GGGTGGGGCSS--EE
T ss_pred ccccCCCcCcC--CCCCCCCcCCcc-cCCCCEEeeCCCCcc------------CCccccCCCC--ccccCCCCCCC--Ee
Confidence 45556789999 789999999999 999999999999999 99998766 7 8982 356776 99
Q ss_pred eeCCCCCCeeeeCCCCCc
Q psy11059 80 RPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 80 ~~~~~~~~~~C~C~~Gy~ 97 (429)
+ ++.++|+|.|++||+
T Consensus 96 ~--~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 96 H--EEQNSVVCSCARGYT 111 (134)
T ss_dssp E--EETTEEEEECCTTEE
T ss_pred E--CCCCCEEEECCCCcE
Confidence 9 889999999999998
No 47
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.06 E-value=2.3e-11 Score=107.21 Aligned_cols=76 Identities=33% Similarity=0.849 Sum_probs=30.6
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCC-CCCCC--CCCCCCCEEccCCCCeeeeCCCCCC----CCC
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSINI-NECES--SPCLHGATCIDEVATFSCVCPKGLT----GRL 420 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~-~~C~~--~~C~~~~~C~~~~~~~~C~C~~g~~----G~~ 420 (429)
++++|..+||.++++|++..++|+|.|++||+|..|+.++ ++|.. .+|.+ +|+++.++|+|.|++||+ |..
T Consensus 41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~ 118 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKA 118 (195)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSC
T ss_pred CCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCc
Confidence 8999999999999999999999999999999999998667 88986 45765 999999999999999999 999
Q ss_pred CCCCC
Q psy11059 421 CETNI 425 (429)
Q Consensus 421 C~~~i 425 (429)
|+..+
T Consensus 119 C~~~~ 123 (195)
T 1nfu_B 119 CIPTG 123 (195)
T ss_dssp EEESS
T ss_pred cccCC
Confidence 97543
No 48
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.05 E-value=8.1e-11 Score=95.18 Aligned_cols=73 Identities=33% Similarity=0.820 Sum_probs=59.4
Q ss_pred CCCcCCCCC--------cCCCCccccCCCceEEecCCCCCCCCccCCC--CCCCCC--CCCCCCEEccCCCCeeeeCCCC
Q psy11059 348 DFDECLSNP--------CFNGATCQNKINGYTCVCAPGYSGKECSINI--NECESS--PCLHGATCIDEVATFSCVCPKG 415 (429)
Q Consensus 348 ~i~~C~~~~--------C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~--~~C~~~--~C~~~~~C~~~~~~~~C~C~~g 415 (429)
++++|..+| |.++++|++..++|+|.|++||+|..|+..+ ++|... .|.+ +|+++.++|+|.|++|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G 82 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPG 82 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTT
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCC
Confidence 678888888 9999999999999999999999999997443 467643 4544 8999999999999999
Q ss_pred CC----CCCCC
Q psy11059 416 LT----GRLCE 422 (429)
Q Consensus 416 ~~----G~~C~ 422 (429)
|+ |..|+
T Consensus 83 ~~~~~~g~~C~ 93 (114)
T 1aut_L 83 YKLGDDLLQCH 93 (114)
T ss_dssp EEECTTSSCEE
T ss_pred eeECCCCCccC
Confidence 99 56665
No 49
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.02 E-value=3.6e-11 Score=100.17 Aligned_cols=74 Identities=34% Similarity=0.890 Sum_probs=29.2
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCC-CCCCC--CCCCCCCEEccCCCCeeeeCCCCCC----CCC
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSINI-NECES--SPCLHGATCIDEVATFSCVCPKGLT----GRL 420 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~-~~C~~--~~C~~~~~C~~~~~~~~C~C~~g~~----G~~ 420 (429)
++++|..+||.++++|++..++|+|.|++||+|..|+..+ ++|.. .+|.+ +|+++.++|+|.|++||+ |..
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~ 118 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKA 118 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSC
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCc
Confidence 7899999999999999999999999999999999998667 88976 35765 899999999999999999 999
Q ss_pred CCC
Q psy11059 421 CET 423 (429)
Q Consensus 421 C~~ 423 (429)
|+.
T Consensus 119 C~~ 121 (134)
T 2vh0_B 119 CIP 121 (134)
T ss_dssp EEE
T ss_pred cCc
Confidence 974
No 50
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.01 E-value=6.5e-11 Score=94.38 Aligned_cols=77 Identities=27% Similarity=0.628 Sum_probs=36.1
Q ss_pred ccccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEee
Q psy11059 2 YFKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRP 81 (429)
Q Consensus 2 ~~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~ 81 (429)
|+...+++|||+....+|. ++|+ +..++|+|.|++||+|. +|..|+ +++ +|...++|. ++|+
T Consensus 22 ~~~~~Cd~neC~~~~~~C~--~~C~-n~~g~y~C~C~~Gy~g~---------~g~~C~-did--eC~~~~~C~--~~C~- 83 (107)
T 2w2n_E 22 YFQGAMGTNECLDNNGGCS--YVCN-DLKIGYECLCPDGFQLV---------AQRRCE-DID--ECQDPDTCS--QLCV- 83 (107)
T ss_dssp CCSCCBSCCGGGTGGGGCS--SEEE-CCSBSCEEECCTTCEEE---------TTTEEE-C--------------------
T ss_pred cCCCCCcCccCcCCCCCCC--CEeE-eCCCCeEEECCCCcccc---------CCCccc-ccc--ccCCCCCcC--Ceee-
Confidence 5666677888853345675 4999 99999999999999942 258998 888 998457896 6999
Q ss_pred CCCCCCeeeeCCCCCc
Q psy11059 82 QLTEQLYECVCPPGYK 97 (429)
Q Consensus 82 ~~~~~~~~C~C~~Gy~ 97 (429)
++.++|+|.|++||+
T Consensus 84 -n~~gsy~C~C~~Gy~ 98 (107)
T 2w2n_E 84 -NLEGGYKCQCEEGFQ 98 (107)
T ss_dssp ----------------
T ss_pred -cCCCCEEEECCCCce
Confidence 999999999999998
No 51
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.97 E-value=1.6e-10 Score=92.12 Aligned_cols=75 Identities=27% Similarity=0.750 Sum_probs=35.9
Q ss_pred CCccCCCCccCCCcCCCC--CcCCCCccccCCCceEEecCCCCCC---CCccCCCCCCCC-CCCCCCCEEccCCCCeeee
Q psy11059 338 PGFAGDHCDVDFDECLSN--PCFNGATCQNKINGYTCVCAPGYSG---KECSININECES-SPCLHGATCIDEVATFSCV 411 (429)
Q Consensus 338 ~g~~g~~C~~~i~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~G---~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~C~ 411 (429)
.+|.+..| ++++|..+ +|. ++|++..++|+|.|++||+| ..|+ +|++|.. .+|. ++|+++.++|+|.
T Consensus 20 ~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 20 NLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQ 92 (107)
T ss_dssp CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C--------------------------
T ss_pred CCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEE
Confidence 46677777 57888764 454 58999999999999999997 7896 9999974 7886 6899999999999
Q ss_pred CCCCCCCC
Q psy11059 412 CPKGLTGR 419 (429)
Q Consensus 412 C~~g~~G~ 419 (429)
|++||++.
T Consensus 93 C~~Gy~~~ 100 (107)
T 2w2n_E 93 CEEGFQLD 100 (107)
T ss_dssp --------
T ss_pred CCCCceEC
Confidence 99999875
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.93 E-value=9.3e-10 Score=105.43 Aligned_cols=78 Identities=37% Similarity=1.004 Sum_probs=67.7
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCCCCCCC---CCCCCCCEEccCCCCeeeeCCCCCCCC----C
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSININECES---SPCLHGATCIDEVATFSCVCPKGLTGR----L 420 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~---~~C~~~~~C~~~~~~~~C~C~~g~~G~----~ 420 (429)
++++|..+||.++++|++..++|+|.|++||+|..|+.++++|.. .+|.+ +|+++.++|+|.|++||+|. .
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~ 81 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQ 81 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTTSSC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEeccccccccccccc
Confidence 678999999999999999999999999999999999889999986 78987 89999999999999999864 4
Q ss_pred CCCCCCCC
Q psy11059 421 CETNIDDC 428 (429)
Q Consensus 421 C~~~i~~C 428 (429)
|. ++++|
T Consensus 82 C~-~~~~c 88 (317)
T 3h5c_B 82 CV-PHDQC 88 (317)
T ss_dssp CE-ECSSC
T ss_pred cc-ccccc
Confidence 53 44444
No 53
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.93 E-value=9.1e-10 Score=105.51 Aligned_cols=69 Identities=32% Similarity=0.795 Sum_probs=62.6
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCC--CCCCCCCCeEeeCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTT--APPCLNGATCRPQLTE 85 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~--~~~C~~~g~C~~~~~~ 85 (429)
++|+| ..+||.++|+|+ +..++|+|.|++||+ |..|+.+++ +|.. .++|.+ +|+ ++.
T Consensus 4 d~~~C--~~~pC~~~g~C~-~~~~~~~C~C~~g~~------------g~~C~~~~~--eC~~~~~~~C~~--~C~--~~~ 62 (317)
T 3h5c_B 4 GGSPC--ISQPCLHNGSCQ-DSIWGYTCTCSPGYE------------GSNCELAKN--ECHPERTDGCQH--FCL--PGQ 62 (317)
T ss_dssp --CCT--TSCCCTTTCCCC-CCSSSCCCCCSSSCC------------SSSSCCCSS--SCCTTCTTSCSS--EEE--CCS
T ss_pred cCCcC--CCCCCCCCCEeE-CCCCCeEEECCCCCc------------CCccccCcc--cCCCCCCCCCcC--ccc--cCC
Confidence 57899 789999999999 999999999999999 999998999 9983 289988 999 999
Q ss_pred CCeeeeCCCCCc
Q psy11059 86 QLYECVCPPGYK 97 (429)
Q Consensus 86 ~~~~C~C~~Gy~ 97 (429)
++|+|.|++||+
T Consensus 63 g~~~C~C~~g~~ 74 (317)
T 3h5c_B 63 ESYTCSCAQGYR 74 (317)
T ss_dssp SSCEEECCTTEE
T ss_pred CeeEEecccccc
Confidence 999999999998
No 54
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.89 E-value=8.1e-10 Score=75.99 Aligned_cols=48 Identities=25% Similarity=0.675 Sum_probs=34.5
Q ss_pred CCCccCCCCCCCCCCCCCCCEE-----ccCCCCeeeeCCCCCCCCCCCCCCCC
Q psy11059 380 GKECSININECESSPCLHGATC-----IDEVATFSCVCPKGLTGRLCETNIDD 427 (429)
Q Consensus 380 G~~C~~~~~~C~~~~C~~~~~C-----~~~~~~~~C~C~~g~~G~~C~~~i~~ 427 (429)
|..|++++++|.++||.++|+| ++..++|+|.|++||+|.+||+.|..
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~~ 53 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVMA 53 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECCC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCcc
Confidence 4567777888888888888888 45567788888888888888877653
No 55
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.84 E-value=2.5e-09 Score=91.88 Aligned_cols=76 Identities=22% Similarity=0.491 Sum_probs=57.9
Q ss_pred CCeeEe-CCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCc-cCCCCCCCCCCCCCCC------eeCCccccCCCCCe
Q psy11059 247 GNYDCT-CDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCS-VELTGCVGPDTCLNGG------TCKPYLVDETQHRF 318 (429)
Q Consensus 247 ~~~~C~-C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~-~~~~~C~~~~~C~~~~------~C~~~~~~~~~~~~ 318 (429)
.+.+|+ |.++|+|..|+ +|++||+|..+. .....|.. ..|.+.+ +| ...++
T Consensus 73 ~tG~C~~C~~g~~G~~Ce-------------~C~~Gy~g~~~~~~~~~~C~~-C~C~~~Gs~~~~~~C-------d~~tG 131 (162)
T 1klo_A 73 LTGECLKCIYNTAGFYCD-------------RCKEGFFGNPLAPNPADKCKA-CACNPYGTVQQQSSC-------NPVTG 131 (162)
T ss_dssp TTCCBCCBCTTEETTTTC-------------EECTTEEECTTCSSGGGSEEE-CCCCTTTBGGGCCCC-------CTTTC
T ss_pred CCCcccCCCCCCcCCCcC-------------cCchhhcCCccccCCCCCCee-ccCCCCCccCCCCCC-------CCCCC
Confidence 456895 99999999998 588999998765 22344655 5666654 56 33467
Q ss_pred eeeCCCCccCCCCcccccCCCccCCCC
Q psy11059 319 NCTCPSGYHGKICEKCFCRPGFAGDHC 345 (429)
Q Consensus 319 ~C~C~~G~~G~~C~~C~C~~g~~g~~C 345 (429)
+|.|++||+|.+|+ .|.+||+|...
T Consensus 132 ~C~C~~g~~G~~Cd--~C~~g~~g~~~ 156 (162)
T 1klo_A 132 QCQCLPHVSGRDCG--TCDPGYYNLQS 156 (162)
T ss_dssp CCCBCTTEESTTCC--EECTTCBCGGG
T ss_pred EeECCCCCcCCCCC--CCCCCcccCCC
Confidence 99999999999999 58999998754
No 56
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.71 E-value=6.3e-09 Score=71.53 Aligned_cols=47 Identities=26% Similarity=0.560 Sum_probs=38.8
Q ss_pred CCCCccCCCcCCCCCcCCCCcc-----ccCCCceEEecCCCCCCCCccCCCC
Q psy11059 342 GDHCDVDFDECLSNPCFNGATC-----QNKINGYTCVCAPGYSGKECSININ 388 (429)
Q Consensus 342 g~~C~~~i~~C~~~~C~~~~~C-----~~~~g~~~C~C~~G~~G~~C~~~~~ 388 (429)
|..|++++++|..+||.++|+| ++..++|+|.|++||+|+.|+..|.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 4567789999999999999999 5677899999999999999986653
No 57
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.63 E-value=1.4e-08 Score=91.03 Aligned_cols=104 Identities=27% Similarity=0.576 Sum_probs=77.3
Q ss_pred CCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccC-----CCCccCCCcCCCCCcCCCCccccCCCceEE
Q psy11059 298 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAG-----DHCDVDFDECLSNPCFNGATCQNKINGYTC 372 (429)
Q Consensus 298 ~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g-----~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C 372 (429)
..|.++|+| .. +.|.|.+||+|..|+ |+.+... ..|.. .....+|.++|+|+. .+|
T Consensus 96 ~~Csg~G~C----~~-----g~C~C~~G~~G~~Ce---c~~~~~~~~~~~~~C~~---~~~~~~Csg~G~C~~----g~C 156 (217)
T 2p28_B 96 SLCHGKGFL----EC-----GICRCDTGYIGKNCE---CQTQGRSSQELEGSCRK---DNNSIICSGLGDCVC----GQC 156 (217)
T ss_dssp CTTTTSEEE----ET-----TEEEECTTEESTTSC---EECCCCC-GGGGGGGBS---STTSCBGGGTEEEET----TEE
T ss_pred CccCCCceE----EC-----CEEECCCCccCCccc---ccCcccccccCCCcCCC---CCCCCCCCCCCEEeC----Cce
Confidence 568888898 22 589999999999776 4433221 23321 112457999999985 289
Q ss_pred ecCCC------CCCCCccCCCCCCCCC---CCCCC--CEEccCCCCeeeeCCCCCCCCCCCCC
Q psy11059 373 VCAPG------YSGKECSININECESS---PCLHG--ATCIDEVATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 373 ~C~~G------~~G~~C~~~~~~C~~~---~C~~~--~~C~~~~~~~~C~C~~g~~G~~C~~~ 424 (429)
.|.+| |+|..|+.+++.|... +|..+ |+|.. .+|.|.+||+|..|+.+
T Consensus 157 ~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 157 LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQHH 215 (217)
T ss_dssp EECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSCEE
T ss_pred ECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcCCC
Confidence 99999 5899998777788754 79887 99975 38999999999999854
No 58
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.61 E-value=2.8e-08 Score=63.55 Aligned_cols=37 Identities=38% Similarity=0.950 Sum_probs=34.4
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCE 59 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~ 59 (429)
++|+| .++||.++|+|+ +..++|+|.|++||+ |..|+
T Consensus 2 d~d~C--~~~pC~ngg~C~-~~~~~~~C~C~~G~~------------G~~Ce 38 (39)
T 1edm_B 2 DGDQC--ESNPCLNGGSCK-DDINSYECWCPFGFE------------GKNCE 38 (39)
T ss_dssp CCCTT--TTCCCCTTCEEE-EETTEEEEECCTTCC------------STTSC
T ss_pred ccccC--CCCCCCCCCEeE-cCCCceEeECCCCCc------------CCccC
Confidence 57999 789999999999 999999999999999 88886
No 59
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.56 E-value=6.6e-08 Score=61.79 Aligned_cols=37 Identities=43% Similarity=1.203 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCC
Q psy11059 386 NINECESSPCLHGATCIDEVATFSCVCPKGLTGRLCE 422 (429)
Q Consensus 386 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~ 422 (429)
++++|..+||.++++|++..++|+|.|++||+|.+|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5677777777777777777777777787778777776
No 60
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.54 E-value=4.1e-08 Score=88.00 Aligned_cols=92 Identities=21% Similarity=0.458 Sum_probs=69.8
Q ss_pred CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCC-------CCCC---CCCCCCCCCeEeeCCCC
Q psy11059 16 RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISN-------QICT---TAPPCLNGATCRPQLTE 85 (429)
Q Consensus 16 ~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~-------~~C~---~~~~C~~~g~C~~~~~~ 85 (429)
...|+++|+|+ . .+|+|.+||+ |..|+.+.+. ..|. ...+|.++|+|+ .
T Consensus 95 ~~~Csg~G~C~-~----g~C~C~~G~~------------G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~-- 153 (217)
T 2p28_B 95 RSLCHGKGFLE-C----GICRCDTGYI------------GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--C-- 153 (217)
T ss_dssp -CTTTTSEEEE-T----TEEEECTTEE------------STTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--T--
T ss_pred CCccCCCceEE-C----CEEECCCCcc------------CCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe--C--
Confidence 45799999999 3 6899999999 7777754320 0254 146799999999 4
Q ss_pred CCeeeeCCCCC------c------ccCCCCCC---CCCCC--CeEecCCCce-eCCeeccCCCC
Q psy11059 86 QLYECVCPPGY------K------EIRDCTSN---PCLND--GVCVWMFDVT-IQVYKGRYCEL 131 (429)
Q Consensus 86 ~~~~C~C~~Gy------~------~~~~C~~~---~C~~~--g~C~~~~~C~-~~g~~G~~C~~ 131 (429)
.+|+|.+|| + +++.|... +|..+ |+|+.. .|. .+||+|..|+.
T Consensus 154 --g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~g-~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 154 --GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG-KCRCHPGFEGSACQH 214 (217)
T ss_dssp --TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEETT-EEEECTTEESTTSCE
T ss_pred --CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeCC-eeECCCCCccCCcCC
Confidence 369999995 4 35677754 79888 999963 399 99999999974
No 61
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.41 E-value=1.2e-07 Score=93.62 Aligned_cols=69 Identities=28% Similarity=0.629 Sum_probs=60.1
Q ss_pred CCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCee
Q psy11059 10 SPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYE 89 (429)
Q Consensus 10 ~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~ 89 (429)
||| ..+++..+++|+ +..++|+|.|++||++ .+|..|+ +++ ||....+|.+ +|+ ++.++|+
T Consensus 1 ~eC--~~~~~~c~~~C~-~~~~~y~C~C~~G~~~---------~~~~~C~-did--eC~~~~~C~~--~C~--n~~g~~~ 61 (400)
T 3p5b_L 1 NEC--LDNNGGCSHVCN-DLKIGYECLCPDGFQL---------VAQRRCE-DID--ECQDPDTCSQ--LCV--NLEGGYK 61 (400)
T ss_dssp CCT--TTTGGGCSSEEE-ECSSSEEEECCTTEEE---------CSSSCEE-ECC--CCSTTSSCSS--CCB--CCSSSCB
T ss_pred Ccc--cCCCCCCCCEeE-CCCCCeEEECCCCCCc---------CCCCccc-Cch--hhhccCCCCC--ccC--CCcccee
Confidence 689 667777778999 9999999999999983 2488997 888 9985688976 899 9999999
Q ss_pred eeCCCCCc
Q psy11059 90 CVCPPGYK 97 (429)
Q Consensus 90 C~C~~Gy~ 97 (429)
|.|++||+
T Consensus 62 C~C~~g~~ 69 (400)
T 3p5b_L 62 CQCEEGFQ 69 (400)
T ss_dssp CCCCTTCC
T ss_pred eecccccc
Confidence 99999998
No 62
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.40 E-value=7.1e-07 Score=94.47 Aligned_cols=81 Identities=26% Similarity=0.674 Sum_probs=61.0
Q ss_pred ccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCC---CCCccCCCCCCC-CCCCCCCCEEccCCCCeee
Q psy11059 335 FCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYS---GKECSININECE-SSPCLHGATCIDEVATFSC 410 (429)
Q Consensus 335 ~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C 410 (429)
.|..|+.+...+-++++|..++-.-.++|++++++|+|.|++||. |..|+ +|+||. ..+|.+ +|+++.++|+|
T Consensus 280 dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~y~C 356 (699)
T 1n7d_A 280 DCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKC 356 (699)
T ss_dssp CSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCTT--TCCBCSSCBCC
T ss_pred eecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-CccccCCCCcccc--ccccCCCCeee
Confidence 455554443222256777654311235899999999999999998 78896 899997 567864 79999999999
Q ss_pred eCCCCCCC
Q psy11059 411 VCPKGLTG 418 (429)
Q Consensus 411 ~C~~g~~G 418 (429)
.|++||++
T Consensus 357 ~C~~G~~~ 364 (699)
T 1n7d_A 357 QCEEGFQL 364 (699)
T ss_dssp CCCSSCBC
T ss_pred eeeccccc
Confidence 99999985
No 63
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.39 E-value=3.4e-07 Score=62.69 Aligned_cols=42 Identities=31% Similarity=0.778 Sum_probs=31.6
Q ss_pred CCCCCCCC---CCCCCCEEc--cCCCCeeeeCCCCCCCCCCCCCCCC
Q psy11059 386 NINECESS---PCLHGATCI--DEVATFSCVCPKGLTGRLCETNIDD 427 (429)
Q Consensus 386 ~~~~C~~~---~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~~i~~ 427 (429)
+|++|.+. ||.++|+|+ +..++|+|.|++||+|.+|+..+.+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~~ 48 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDLR 48 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCcc
Confidence 46677765 788888887 6777888888888888888776544
No 64
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.37 E-value=2.5e-07 Score=61.02 Aligned_cols=39 Identities=28% Similarity=0.645 Sum_probs=31.5
Q ss_pred CCCCC---CCCCCCEEc--cCCCCeeeeCCCCCCCCCCCCCCCC
Q psy11059 389 ECESS---PCLHGATCI--DEVATFSCVCPKGLTGRLCETNIDD 427 (429)
Q Consensus 389 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~~i~~ 427 (429)
+|.+. ||.++|+|+ +..++|+|.|++||+|.+|+++|++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~e 45 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDLR 45 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECCC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccCC
Confidence 45555 888888997 6778899999999999999887764
No 65
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.30 E-value=3e-07 Score=90.81 Aligned_cols=67 Identities=28% Similarity=0.823 Sum_probs=58.7
Q ss_pred CcCCCCCcCCCCccccCCCceEEecCCCCC---CCCccCCCCCCC-CCCCCCCCEEccCCCCeeeeCCCCCCCC
Q psy11059 350 DECLSNPCFNGATCQNKINGYTCVCAPGYS---GKECSININECE-SSPCLHGATCIDEVATFSCVCPKGLTGR 419 (429)
Q Consensus 350 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~g~~G~ 419 (429)
+||..+++...+.|++.+++|.|.|++||+ |..|+ +++||. ..+|.+ +|+++.++|+|.|.+||++.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 467777777778999999999999999998 88995 999997 468875 79999999999999999854
No 66
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=1.3e-07 Score=93.09 Aligned_cols=72 Identities=29% Similarity=0.720 Sum_probs=19.1
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCC----CCCccCCCCCCC-CCCCCCCCEEccCCCCeeeeCCCCCC----C
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYS----GKECSININECE-SSPCLHGATCIDEVATFSCVCPKGLT----G 418 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~g~~----G 418 (429)
++++|..+++.....|.+..++|+|.|++||+ |+.| .++++|. ..+|.+ .|+++.++|+|.|++||+ |
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~ 78 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDR 78 (386)
T ss_dssp ---------------------------------------------------CCTT--EEC-----CCEECCTTEEECTTS
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccC--cCCCCCCCCeEEECCCceEcCCC
Confidence 67899887755556999999999999999998 8899 5999996 678986 499999999999999998 7
Q ss_pred CCCC
Q psy11059 419 RLCE 422 (429)
Q Consensus 419 ~~C~ 422 (429)
..|.
T Consensus 79 ~~C~ 82 (386)
T 3v65_B 79 RSCK 82 (386)
T ss_dssp SCEE
T ss_pred CeEC
Confidence 7776
No 67
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=1.4e-07 Score=92.82 Aligned_cols=72 Identities=25% Similarity=0.539 Sum_probs=15.6
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCC
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQL 87 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~ 87 (429)
++||| ..+++....+|+ +..|+|+|.|++||+ ...+|..| .+++ ||....+|.+ .|+ ++.++
T Consensus 2 ~~~~C--~~~~~~c~~~C~-~~~g~~~C~C~~G~~--------l~~~~~~C-~d~~--eC~~~~~C~~--~C~--~~~g~ 63 (386)
T 3v65_B 2 GEENC--NVNNGGCAQKCQ-MIRGAVQCTCHTGYR--------LTEDGRTC-QDVN--ECAEEGYCSQ--GCT--NSEGA 63 (386)
T ss_dssp ----------------------------------------------------------------CCTT--EEC-------
T ss_pred CcCcc--cCCCCCCCCCCc-CCCCCcEeECCCCce--------ECCCCCcc-Cccc--eeCCcCcccC--cCC--CCCCC
Confidence 57999 455544444998 999999999999998 22348899 4888 9975679987 499 99999
Q ss_pred eeeeCCCCCc
Q psy11059 88 YECVCPPGYK 97 (429)
Q Consensus 88 ~~C~C~~Gy~ 97 (429)
|+|.|++||+
T Consensus 64 ~~C~C~~g~~ 73 (386)
T 3v65_B 64 FQCWCEAGYE 73 (386)
T ss_dssp CCEECCTTEE
T ss_pred CeEEECCCce
Confidence 9999999998
No 68
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.28 E-value=2.3e-06 Score=90.58 Aligned_cols=157 Identities=23% Similarity=0.506 Sum_probs=101.8
Q ss_pred CCCCCCCCCCCCCEeccCCCCceEE----ecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCCCCCCeEeeCCCC
Q psy11059 11 PCDAQRNPCQNGGKCNEDETGNYDC----TCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPCLNGATCRPQLTE 85 (429)
Q Consensus 11 ~C~~~~~~C~~~g~C~~~~~~~~~C----~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C~~~g~C~~~~~~ 85 (429)
+|....-.|.+ |+|+ +. +++| .|..|+. ...|.. . +|. ....|.+ ++|+ +
T Consensus 175 ~C~~~~f~C~~-g~Ci-~~--~~~CDg~~dC~dgsD------------E~~C~~--~--~C~~~~f~C~~-g~Ci--~-- 229 (699)
T 1n7d_A 175 PCSAFEFHCLS-GECI-HS--SWRCDGGPDCKDKSD------------EENCAV--A--TCRPDEFQCSD-GNCI--H-- 229 (699)
T ss_dssp CSCSSSCCCSS-SCCC-ST--TCTTSSSCCSTTSCS------------SCSCCC--C--CCCSSEEESSS-SCEE--E--
T ss_pred CCCCcceecCC-CceE-ec--hhccCCCCCCCCCcc------------cccCCC--c--ccCCCcEecCC-Ccee--e--
Confidence 34323335654 4676 43 5566 5665555 677753 2 565 2335764 7899 3
Q ss_pred CCeeee----CCCCCc-----ccCCCC---CCCCCCCCeEecCCC-----ce-eCCeeccCCCCCCCCCCCCCC--CCCC
Q psy11059 86 QLYECV----CPPGYK-----EIRDCT---SNPCLNDGVCVWMFD-----VT-IQVYKGRYCELPEIGDCSSNP--CLND 145 (429)
Q Consensus 86 ~~~~C~----C~~Gy~-----~~~~C~---~~~C~~~g~C~~~~~-----C~-~~g~~G~~C~~~~i~~C~~~~--C~~~ 145 (429)
.+++|. |..|.. .+..|. ..+|.+ |.|+.... +. ..|+.+...+- ++++|..++ |.
T Consensus 230 ~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~eC~~~~~~C~-- 305 (699)
T 1n7d_A 230 GSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKEC-GTNECLDNNGGCS-- 305 (699)
T ss_dssp TTCCSSSCCCSSSSCSSSSTTCCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSC-CCCCTTSSTTTSC--
T ss_pred eecccCCCCCCCCCCccCCCCCCCcccCCCceecCC-CcEeCCcccccccceecCccccccccc-ccccccccccCcC--
Confidence 567785 777765 233452 234654 67766432 33 44554443333 567787543 53
Q ss_pred CeEeeCCCCccccCCCCCCCCCCCCCCCceecCCcc---cCCcccCCCCCCC-CCCCCCCCEEeeCCCCe-eeccCCC
Q psy11059 146 GVCVDVYKGRYCELPEIGDCSSNPCLNDGVCVDVYK---GRYWELPEIRDCT-SNPCLNDGVCVDEVYKG-RYWELPE 218 (429)
Q Consensus 146 g~C~~~~~g~~C~~~~~~~C~~~~C~~~~~C~~~~~---G~~c~~~~~~~C~-~~~C~~~~~C~~~~~~~-C~C~~~g 218 (429)
++|++..++|.|. |.+||+ |..|+ +|+||. ..+|. ++|+++.++| |.| ++|
T Consensus 306 ~~C~~~~~~~~C~-----------------C~~G~~~~~~~~C~--dideC~~~~~C~--~~C~n~~g~y~C~C-~~G 361 (699)
T 1n7d_A 306 HVCNDLKIGYECL-----------------CPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLEGGYKCQC-EEG 361 (699)
T ss_dssp TTCCCCTTCCCCC-----------------CCSSSCCCSSSCCC--CCCCCSSSSSCT--TTCCBCSSCBCCCC-CSS
T ss_pred CCcccCCCCcEEe-----------------CCCCeEcCCCCccc--CccccCCCCccc--cccccCCCCeeeee-ecc
Confidence 4899999999998 999998 77888 899998 46785 5899999999 999 888
No 69
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.27 E-value=5.8e-07 Score=59.25 Aligned_cols=40 Identities=23% Similarity=0.421 Sum_probs=33.7
Q ss_pred CCCCCCCC---CCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 10 SPCDAQRN---PCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 10 ~~C~~~~~---~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
++| .++ ||+|+|+|+. +..++|+|.|++||+ |..|+.+++
T Consensus 1 ~~C--~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~------------G~~Ce~~~~ 44 (45)
T 1a3p_A 1 PGX--PSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS------------GDRCQTRDL 44 (45)
T ss_dssp CCC--TTCCSSCCSSSCEEEECTTTSSEEEECCTTEE------------TTTTCEECC
T ss_pred CCc--ccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc------------CCcCCcccC
Confidence 467 566 9999999973 677899999999999 999987654
No 70
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.27 E-value=6.4e-07 Score=61.29 Aligned_cols=42 Identities=26% Similarity=0.555 Sum_probs=35.5
Q ss_pred CCCCCCCCCC---CCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 8 LSSPCDAQRN---PCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 8 ~~~~C~~~~~---~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
++|+| .++ ||+|+|+|+. +..++|+|.|++||+ |..|+.++.
T Consensus 2 ~i~~C--~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~------------G~~Ce~~~~ 47 (53)
T 1egf_A 2 SYPGC--PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS------------GDRCQTRDL 47 (53)
T ss_dssp EECCC--CTTSSCSSCSSCEEEEESSSSCEEEECCTTCC------------SSSSCCCSC
T ss_pred CcccC--CCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc------------CCcCCccCc
Confidence 47899 565 9999999984 567899999999999 999987653
No 71
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.23 E-value=2.8e-07 Score=65.64 Aligned_cols=41 Identities=29% Similarity=0.675 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCCEEcc-----CCCCeeeeCCCCCCCCCCCCCCCCC
Q psy11059 388 NECESSPCLHGATCID-----EVATFSCVCPKGLTGRLCETNIDDC 428 (429)
Q Consensus 388 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~g~~G~~C~~~i~~C 428 (429)
++|.++||.++|+|++ ..++|+|.|++||+|.+|+++|+++
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~ 52 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSS
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcc
Confidence 4556667777777764 4566777777777777777777665
No 72
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.22 E-value=1.3e-06 Score=93.30 Aligned_cols=68 Identities=28% Similarity=0.795 Sum_probs=53.6
Q ss_pred CCCcCCCCCcCCCCccccCCCceEEecCCCCC---CCCccCCCCCCC-CCCCCCCCEEccCCCCeeeeCCCCCCC
Q psy11059 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYS---GKECSININECE-SSPCLHGATCIDEVATFSCVCPKGLTG 418 (429)
Q Consensus 348 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~g~~G 418 (429)
++++|..++..-...|++++++|+|.|++||. |..|+ +|+||. ..+|. ++|+++.++|+|.|++||++
T Consensus 311 ~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 311 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred ccccccccccCccccccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 34566544322234899999999999999995 88996 899997 45665 47999999999999999974
No 73
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.20 E-value=2.8e-07 Score=65.64 Aligned_cols=43 Identities=23% Similarity=0.576 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCCCCCEeccC-----CCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNED-----ETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~-----~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
.|+| .++||+|+|+|+ + ..++|+|.|++||+ |..|+.+++ ++.
T Consensus 6 c~~C--~~~pC~ngG~C~-~~~~~~~~~~y~C~C~~Gf~------------G~~Ce~~i~--~~~ 53 (63)
T 1hae_A 6 CAEK--EKTFCVNGGECF-MVKDLSNPSRYLCKCQPGFT------------GARCTENVP--MKV 53 (63)
T ss_dssp CCHH--HHTTSCTTCEEE-EEESSSSSCCEEEECCTTEE------------STTSCEECC--SSC
T ss_pred cCCC--CCCcCCCCcEEe-cCCccCCCCCEEEECCCCCc------------CCccCcCcC--ccc
Confidence 4688 789999999999 5 67899999999999 999998887 665
No 74
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.15 E-value=1e-06 Score=58.22 Aligned_cols=38 Identities=24% Similarity=0.541 Sum_probs=32.1
Q ss_pred CCCCCCCCC---CCCCCCCEeccCCC--CceEEecCCCCcccccccccCcCCCCCCCCC
Q psy11059 8 LSSPCDAQR---NPCQNGGKCNEDET--GNYDCTCDALHTVCCVGLANQTLGSIHCETP 61 (429)
Q Consensus 8 ~~~~C~~~~---~~C~~~g~C~~~~~--~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~ 61 (429)
++|+| .+ +||.| |+|+ +.. ++|.|.|++||+ |.+||..
T Consensus 2 ~i~~C--~~~~~~pC~n-G~C~-~~~~~~~~~C~C~~Gyt------------G~~Ce~~ 44 (46)
T 1k36_A 2 SITKC--SSDMNGYCLH-GQCI-YLVDMSQNYCRCEVGYT------------GVRCEHF 44 (46)
T ss_dssp CEECC--CTTCCSSCSS-EEEE-EETTTTEEEEEECTTCS------------STTSCCC
T ss_pred ccccC--CCCCCCCCCC-CEee-ccCCCCCEEEECCCCCc------------cCCCCcc
Confidence 47889 56 89999 8999 643 789999999999 9999854
No 75
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.12 E-value=3.3e-06 Score=90.29 Aligned_cols=99 Identities=29% Similarity=0.734 Sum_probs=64.3
Q ss_pred CCCCCccccCCC--CeeeeCCCCCCCCCCccCCCCCCCCCCCCCC-CeeCCccccCCCCCeeeeCCCCccCCCCcccccC
Q psy11059 261 PCKHGSCVDKRA--GYFCDCPPTYGGKNCSVELTGCVGPDTCLNG-GTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCR 337 (429)
Q Consensus 261 ~C~~~~C~~~~~--~~~C~C~~G~~g~~c~~~~~~C~~~~~C~~~-~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~ 337 (429)
.|..+.|++... .+.+.|..|+.... ..|.. ++|..+ +.|.+...+ ..++|.|.|++||.+.
T Consensus 280 ~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~-----~~C~~-~~C~~~~~~C~~~C~~-~~~~y~C~C~~Gy~l~-------- 344 (791)
T 3m0c_C 280 KCHSGECITLDKVCNMARDCRDWSDEPI-----KECGT-NECLDNNGGCSHVCND-LKIGYECLCPDGFQLV-------- 344 (791)
T ss_dssp CCTTSCCCCSSCCSCSSCCSSSSCSCCC-----TTBSC-CSTTTGGGGCSSEEEE-CSBSEEEECCTTCEEE--------
T ss_pred ccCCCcccccccccCCccccccccCccc-----ccccc-ccccccccCccccccC-CCCCcccCCCCCCccC--------
Confidence 466666665432 23556777764432 23443 556543 223222255 7889999999999641
Q ss_pred CCccCCCCccCCCcCC-CCCcCCCCccccCCCceEEecCCCCCC
Q psy11059 338 PGFAGDHCDVDFDECL-SNPCFNGATCQNKINGYTCVCAPGYSG 380 (429)
Q Consensus 338 ~g~~g~~C~~~i~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G 380 (429)
.|..|+ +|+||. ..+| ...|+++.++|+|.|++||..
T Consensus 345 ---~g~~C~-dideC~~~~~C--~~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 345 ---AQRRCE-DIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp ---TTTEEE-CCCCCSSSSSC--TTTCCBCSSCBCCCCCSSEEC
T ss_pred ---CCCccc-cCcccCCCCCC--CCeeecCCCCceeecCCCCEe
Confidence 255665 899997 2345 458999999999999999963
No 76
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.09 E-value=4.5e-07 Score=91.02 Aligned_cols=78 Identities=33% Similarity=0.793 Sum_probs=37.3
Q ss_pred cccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCC
Q psy11059 334 CFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCP 413 (429)
Q Consensus 334 C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~ 413 (429)
..|..+|.|..|+ +++|.. +|.+ ++|+.. ++|.|++||+|..|+ +++|.+ +|.++++|++. ++|.|+
T Consensus 379 ~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C~ 445 (463)
T 2wg3_C 379 EECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLCK 445 (463)
T ss_dssp GGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECTTEESTTSC--EECC-----------------------
T ss_pred ccCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCCCcCCCcCC--cCcCCC-CCCCCCEECCC---CEEECC
Confidence 4677788888885 467765 5886 799764 489999999999995 567877 99999999765 689999
Q ss_pred CCCCCCCCCCC
Q psy11059 414 KGLTGRLCETN 424 (429)
Q Consensus 414 ~g~~G~~C~~~ 424 (429)
+||+|..|+..
T Consensus 446 ~G~~G~~C~~~ 456 (463)
T 2wg3_C 446 KGYLGPQCEQV 456 (463)
T ss_dssp -----------
T ss_pred CCcccCCCCCC
Confidence 99999999854
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.07 E-value=1.9e-06 Score=56.91 Aligned_cols=38 Identities=42% Similarity=0.800 Sum_probs=25.6
Q ss_pred CCCCCCC---CCCCCCCEEccCC--CCeeeeCCCCCCCCCCCCC
Q psy11059 386 NINECES---SPCLHGATCIDEV--ATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 386 ~~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~g~~G~~C~~~ 424 (429)
++++|.+ +||.+ |+|+... ++|+|.|++||+|.+|++.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 3556665 67777 6776533 5677777777777777754
No 78
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.06 E-value=5.3e-07 Score=63.29 Aligned_cols=37 Identities=35% Similarity=0.789 Sum_probs=19.1
Q ss_pred CCCcCCCCCcCCC--CccccCCCceEEecCCCCC-CCCcc
Q psy11059 348 DFDECLSNPCFNG--ATCQNKINGYTCVCAPGYS-GKECS 384 (429)
Q Consensus 348 ~i~~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-G~~C~ 384 (429)
++++|..+||.++ ++|++..++|+|.|++||+ |..|+
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 4455555555554 4555555555555555555 55553
No 79
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.00 E-value=1.2e-06 Score=61.47 Aligned_cols=39 Identities=23% Similarity=0.618 Sum_probs=33.0
Q ss_pred cccCCCCCCCCCCCCCCCCC--CEeccCCCCceEEecCCCCc-cc
Q psy11059 3 FKPISLSSPCDAQRNPCQNG--GKCNEDETGNYDCTCDALHT-VC 44 (429)
Q Consensus 3 ~~~~~~~~~C~~~~~~C~~~--g~C~~~~~~~~~C~C~~g~~-g~ 44 (429)
+.-..++|+| .++||+|+ |+|+ +..++|+|.|++||+ |.
T Consensus 5 ~~~~~~~d~C--~snPC~nga~gtC~-~~~g~y~C~C~~Gy~~G~ 46 (61)
T 2k2s_B 5 VQLSETPAAC--SSNPCGPEAAGTCK-ETNSGYICRCNQGYRISL 46 (61)
T ss_dssp --CTTSCCHH--HHCSSCSSSCCEEE-ECSSEEEEECCTTEEEEE
T ss_pred hhhcCCCCcC--cCCCCcCCCccccc-cCCCceEeECCCCCccCC
Confidence 3445678999 78999999 8999 999999999999998 54
No 80
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.93 E-value=5.5e-07 Score=61.35 Aligned_cols=42 Identities=31% Similarity=0.803 Sum_probs=32.3
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCCCCCCEEcc----CCCCeeeeCCCCCCCCCCCCC
Q psy11059 371 TCVCAPGYSGKECSININECESSPCLHGATCID----EVATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 371 ~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~----~~~~~~C~C~~g~~G~~C~~~ 424 (429)
+|.|++||+ ++||.++|+|++ ..++|+|.|++||+|.+|+..
T Consensus 4 ~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 4 TYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 577777775 357888889975 345788999999999999853
No 81
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.60 E-value=2.5e-05 Score=53.16 Aligned_cols=36 Identities=19% Similarity=0.456 Sum_probs=30.5
Q ss_pred CCCCCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCCCC
Q psy11059 15 QRNPCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCETPI 62 (429)
Q Consensus 15 ~~~~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~ 62 (429)
..+||.|+|+|+. +..++|+|.|++||+ |..|++.+
T Consensus 10 ~~~pC~nGG~C~~~~~~~~~~C~C~~Gyt------------G~~Ce~~~ 46 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEALDKYACNCVVGYI------------GERCQYRD 46 (53)
T ss_dssp TCCEECTTCEEEEETTTTEEEEEECTTEE------------STTSCEEC
T ss_pred CCCCCCCCeEEeeecCCCCEEEecCCCCc------------CCCCCcCC
Confidence 4789999999973 567889999999999 99998643
No 82
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.57 E-value=4.4e-05 Score=55.42 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=30.4
Q ss_pred CCCCCCCCCCCCCCCCEeccCCCCceEEec-CCCCccc
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDETGNYDCTC-DALHTVC 44 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C-~~g~~g~ 44 (429)
++|||+..+++|.++++|+ ++.|+|+|.+ ..||+++
T Consensus 2 DidEC~~~~~~C~~~~~C~-Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCI-NHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEE-ETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeE-CCCCCeEecccCCccccc
Confidence 6899976678999999999 9999999984 5677744
No 83
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.56 E-value=2e-05 Score=53.64 Aligned_cols=34 Identities=26% Similarity=0.787 Sum_probs=24.2
Q ss_pred CCCCCCCCEEc--cCCCCeeeeCCCCCCCCCCCCCC
Q psy11059 392 SSPCLHGATCI--DEVATFSCVCPKGLTGRLCETNI 425 (429)
Q Consensus 392 ~~~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~~i 425 (429)
.+||.++|+|+ +..++|+|+|++||+|.+|++.+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 45677777776 55667777777777777777543
No 84
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.55 E-value=3.4e-05 Score=75.25 Aligned_cols=48 Identities=29% Similarity=0.740 Sum_probs=0.0
Q ss_pred CCcCCCCccccCCCceEEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCC
Q psy11059 355 NPCFNGATCQNKINGYTCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCPK 414 (429)
Q Consensus 355 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~ 414 (429)
.+|.++++|++.. +|.|++||+|..|+. .+|.++|+|....| +|.=+.
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~-------c~C~~~g~C~~~~G--qc~~~~ 418 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYTGILCEK-------LRCEEAGSCGSDSG--QGAPPH 418 (426)
T ss_dssp ------------------------------------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCcCCCCcC-------CCCCCCCcccCCCC--ccCCCC
Confidence 4788999998765 899999999998852 35777888866543 454443
No 85
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.52 E-value=1.1e-05 Score=80.91 Aligned_cols=73 Identities=29% Similarity=0.605 Sum_probs=35.1
Q ss_pred EEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCeeeeCCCCCc----ccCCCCCCCCCC
Q psy11059 34 DCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYECVCPPGYK----EIRDCTSNPCLN 109 (429)
Q Consensus 34 ~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy~----~~~~C~~~~C~~ 109 (429)
..+|..+|. |..|+.+ +|. . +|.+ |+|+ . .++|.|++||+ +++.|.+ +|.+
T Consensus 378 p~~C~~~~~------------g~~c~~~----~C~-~-~C~n-G~C~--~---~~~C~C~~G~~G~~C~~~~C~~-~C~~ 432 (463)
T 2wg3_C 378 PEECRATVQ------------PAQTLTS----ECS-R-LCRN-GYCT--P---TGKCCCSPGWEGDFCRTAKCEP-ACRH 432 (463)
T ss_dssp CGGGCCCCC------------CCCCCCC----HHH-H-HCCS-EEEC--T---TSCEEECTTEESTTSCEECC-------
T ss_pred cccCCCCCc------------CCCCccc----ccc-C-CCCC-CccC--C---CCeECCCCCcCCCcCCcCcCCC-CCCC
Confidence 367888888 9999754 677 3 5987 8999 4 35899999999 5678887 9999
Q ss_pred CCeEecCCCce-eCCeeccCCCC
Q psy11059 110 DGVCVWMFDVT-IQVYKGRYCEL 131 (429)
Q Consensus 110 ~g~C~~~~~C~-~~g~~G~~C~~ 131 (429)
+|+|+....|. .+||+|..|+.
T Consensus 433 ~g~C~~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 433 GGVCVRPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp -----------------------
T ss_pred CCEECCCCEEECCCCcccCCCCC
Confidence 99999876699 99999999985
No 86
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.44 E-value=3.8e-05 Score=52.74 Aligned_cols=46 Identities=20% Similarity=0.443 Sum_probs=35.9
Q ss_pred CCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
.|||+....+|+. .|+ ++.|+|+|.|++||+ ...+|..|+ +++ +|.
T Consensus 1 ~dEC~~~~~~C~~--~C~-nt~Gsy~C~C~~Gy~--------L~~d~~~C~-did--ec~ 46 (55)
T 2jkh_L 1 RKLCSLDNGDCDQ--FCH-EEQNSVVCSCARGYT--------LADNGKACI-PTG--PYP 46 (55)
T ss_dssp -CCTTTGGGGCSS--EEE-EETTEEEEECCTTEE--------ECTTSSCEE-ESS--SSC
T ss_pred CccccCCCCCcCc--EeE-cCCCCeEEeCCCCCE--------ECCCCCeec-cCc--ccc
Confidence 3789655667974 899 999999999999998 334588896 777 665
No 87
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.40 E-value=0.00016 Score=55.00 Aligned_cols=72 Identities=15% Similarity=0.344 Sum_probs=56.5
Q ss_pred CCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCCCCCCeEeeCCC---CCCeee
Q psy11059 15 QRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPCLNGATCRPQLT---EQLYEC 90 (429)
Q Consensus 15 ~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C~~~g~C~~~~~---~~~~~C 90 (429)
....|..++.|.....+...|.|.+||.|+ |..|..+.+ ..|+ ....|..+++|++... .+...|
T Consensus 8 ~~~~C~~NA~C~r~~~g~e~C~C~~gy~gd----------g~~Cv~~~~-~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C 76 (99)
T 1ob1_C 8 VKKQCPQNSGCFRHLDEREECKCLLNYKQE----------GDKCVENPN-PTCNENNGGCDADAKCTEEDSGSNGKKITC 76 (99)
T ss_dssp CSCCCCTTEEEECCTTSCCEEEECTTEEEE----------TTEEEECSC-CCSTTGGGGCCTTEEEECCSCSSSSCCCEE
T ss_pred ccCCCCCCCCeEEcCCCCEEEEecCCeecC----------CCeEeeCCC-CChhhcCCCcCCCceeEecCCcccCCceEe
Confidence 456788999999457899999999999988 999985531 1787 2356999999994321 267999
Q ss_pred eCCCCCc
Q psy11059 91 VCPPGYK 97 (429)
Q Consensus 91 ~C~~Gy~ 97 (429)
+|.+||.
T Consensus 77 ~C~~g~~ 83 (99)
T 1ob1_C 77 ECTKPDS 83 (99)
T ss_dssp EECSTTC
T ss_pred EeCCCCc
Confidence 9999987
No 88
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.40 E-value=3e-05 Score=75.69 Aligned_cols=109 Identities=20% Similarity=0.360 Sum_probs=32.8
Q ss_pred CCCCC-CEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCeeeeCCCCC
Q psy11059 18 PCQNG-GKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYECVCPPGY 96 (429)
Q Consensus 18 ~C~~~-g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy 96 (429)
.|.++ ..|. ...+.++|.|+.+++ |..||.-.. ... ..++.++ ++.+......+.|+.-+++
T Consensus 298 ~CnGHas~C~-~~~g~~~C~C~~~tt------------G~~CE~C~p--gy~-~~P~~~g-t~~p~~~g~~~~C~pC~Cn 360 (426)
T 3zyj_B 298 KCNLHATVCV-YDNSKLTCECEHNTT------------GPDCGKCKK--NYQ-GRPWSPG-SYLPIPKGAANACIPSISS 360 (426)
T ss_dssp CCSSSCSCEE-EETTEEEECCCTTEE------------SSSSCEECT--TCC-SSCCCCC-BCCSSSSCBCCCCCCCCC-
T ss_pred cCCCchhhcC-CCCCCceeeCCCCCc------------CCCcccccc--ccc-cCcccCC-cccccCCCCCCcccCCCCC
Confidence 58777 4798 777889999999999 666653211 111 2344442 2211122334445322222
Q ss_pred cccCCCC--CCCCCCCCeEecCCCce-eCCeeccCCCCCCCCCCCCCCCCCCCeEeeC
Q psy11059 97 KEIRDCT--SNPCLNDGVCVWMFDVT-IQVYKGRYCELPEIGDCSSNPCLNDGVCVDV 151 (429)
Q Consensus 97 ~~~~~C~--~~~C~~~g~C~~~~~C~-~~g~~G~~C~~~~i~~C~~~~C~~~g~C~~~ 151 (429)
.....|. ..||.++|+|++...|. ++||+|..|+. .+|.++|+|+..
T Consensus 361 ~~g~~CD~~t~~C~ngg~C~~~~~C~C~~G~~G~~Ce~--------c~C~~~g~C~~~ 410 (426)
T 3zyj_B 361 IGTNVCDNELLHCQNGGTCHNNVRCLCPAAYTGILCEK--------LRCEEAGSCGSD 410 (426)
T ss_dssp ----------------------------------------------------------
T ss_pred CCcCccccCcccCCCCCCcCCCCCCcCCCCCcCCCCcC--------CCCCCCCcccCC
Confidence 2223343 35788888888776788 89999988873 246667777654
No 89
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.37 E-value=3.5e-05 Score=52.26 Aligned_cols=32 Identities=25% Similarity=0.528 Sum_probs=27.7
Q ss_pred CCCCCCCCEeccC----CCCceEEecCCCCcccccccccCcCCCCCCCC
Q psy11059 16 RNPCQNGGKCNED----ETGNYDCTCDALHTVCCVGLANQTLGSIHCET 60 (429)
Q Consensus 16 ~~~C~~~g~C~~~----~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~ 60 (429)
.+||+|+|+|+ + ..++|+|.|++||+ |..||.
T Consensus 13 ~~pC~NGGtC~-~~~~~~~~~y~C~C~~Gf~------------G~~Ce~ 48 (52)
T 3ca7_A 13 AWYCLNDAHCF-AVKIADLPVYSCECAIGFM------------GQRCEY 48 (52)
T ss_dssp HHTSCTTCEEE-EEEETTEEEEEEECCTTEE------------STTSCE
T ss_pred CCcCCCCCEEe-cCccCCCCCEEEECCCCCc------------CCCCcc
Confidence 45999999999 5 45689999999999 999984
No 90
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.35 E-value=2.1e-05 Score=72.38 Aligned_cols=45 Identities=22% Similarity=0.454 Sum_probs=37.7
Q ss_pred CCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 7 SLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 7 ~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
+++|||+...++|+.++.|+ |+.|+|.|.|++||.|+ |..|. +++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~-Nt~Gsy~C~C~~Gy~Gn----------G~~C~-d~d 47 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECR-DYATGFCCRCVANYTGN----------GRQCV-AEG 47 (285)
T ss_dssp ----CHHHHGGGSCTTEEEE-ECSSCEEEEECTTEEEC----------SSSEE-ETT
T ss_pred ccchhccCCCCCCCCCCEeE-cCCCCeEEEcCCCCCCC----------CCcCC-CCC
Confidence 46999976689999999999 99999999999999988 99996 666
No 91
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.27 E-value=0.00044 Score=52.93 Aligned_cols=78 Identities=19% Similarity=0.366 Sum_probs=60.2
Q ss_pred cccCCCCCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCC-CC-CCCCCCCCCeEe
Q psy11059 3 FKPISLSSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQI-CT-TAPPCLNGATCR 80 (429)
Q Consensus 3 ~~~~~~~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~-C~-~~~~C~~~g~C~ 80 (429)
+-.+..-+-| ....|..++.|....+|..+|.|.+||.++ |..|..+ + + |. ...-|..++.|+
T Consensus 4 ~~~~~~~h~C--~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~d----------g~~Cv~~-N--p~C~~nNGGCd~nAeC~ 68 (105)
T 1n1i_A 4 ASNMSSAHKC--IDTNVPENAACYRYLDGTEEWRCLLGFKEV----------GGKCVPA-S--ITCEENNGGCAPEAECT 68 (105)
T ss_dssp ----CCTTSC--CSSCCCTTEEEEECTTSCEEEEECTTEEEC----------SSSEEEC-C--CCTTSGGGGSCTTSEEE
T ss_pred hhcCCcCcEe--cCCCCCCCCCeEECCCCCEeEEEECCeecc----------CCEEEEC-C--cchhhcCCCcCCCcEeE
Confidence 3344555678 444799999999558899999999999988 9999755 6 6 76 355699999999
Q ss_pred eCCC-CCCeeeeCCCCCc
Q psy11059 81 PQLT-EQLYECVCPPGYK 97 (429)
Q Consensus 81 ~~~~-~~~~~C~C~~Gy~ 97 (429)
.+ +..-.|.|.++|.
T Consensus 69 --~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 69 --MDDKKEVECKCTKEGS 84 (105)
T ss_dssp --ECTTSCEEEECCSTTC
T ss_pred --ECCCCEEEeECCCCCC
Confidence 54 4788999999986
No 92
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.26 E-value=0.00017 Score=48.89 Aligned_cols=34 Identities=24% Similarity=0.588 Sum_probs=28.2
Q ss_pred CCCCCCCCC--------CCCCCCCCEeccCCCCceEEecCCCCcc
Q psy11059 7 SLSSPCDAQ--------RNPCQNGGKCNEDETGNYDCTCDALHTV 43 (429)
Q Consensus 7 ~~~~~C~~~--------~~~C~~~g~C~~~~~~~~~C~C~~g~~g 43 (429)
.++|||+.. .++|. ++|+ ++.|+|+|.|++||++
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~-n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCH-NYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEE-EETTEEEEECSTTCEE
T ss_pred CccccccCcccccccccCCCCC--CEeE-CCCCCeEEECCCCCeE
Confidence 368999643 37897 4999 9999999999999993
No 93
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.10 E-value=0.00019 Score=51.66 Aligned_cols=49 Identities=20% Similarity=0.468 Sum_probs=38.3
Q ss_pred CCCCCCCCCCCCCCCCCCEeccCCCC-ceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 6 ISLSSPCDAQRNPCQNGGKCNEDETG-NYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 6 ~~~~~~C~~~~~~C~~~g~C~~~~~~-~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
..++|||+.....|+. .|+ ++.| +|+|.|++||. ...+|..|. +++ +|.
T Consensus 2 ~~d~~eC~~~nggC~h--~C~-n~~g~s~~C~C~~Gy~--------L~~D~~tC~-d~d--ec~ 51 (69)
T 1kli_L 2 KDDQLICVNENGGCEQ--YCS-DHTGTKRSCRCHEGYS--------LLADGVSCT-PTV--EYP 51 (69)
T ss_dssp CSCCCCTTSGGGGCSS--EEE-EETTTEEEEECCTTEE--------ECTTSSCEE-ECS--SSC
T ss_pred CcccccccCCCCCcCC--EeE-cCCCCCEEEeCCCCCe--------ECCCCCccc-Ccc--ccc
Confidence 3578999655567876 799 8888 89999999998 445689996 777 654
No 94
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.97 E-value=0.0005 Score=55.52 Aligned_cols=59 Identities=25% Similarity=0.647 Sum_probs=44.4
Q ss_pred CcCCCCccccCC--Cce-EEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCC
Q psy11059 356 PCFNGATCQNKI--NGY-TCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 356 ~C~~~~~C~~~~--g~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~ 423 (429)
||.++++|++.. .+| +|.|++||+|..|+++++ .+|..+ ....|++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-----ccccceeeccccccCCcccC
Confidence 689999998874 455 999999999999987654 234322 23468888888888888863
No 95
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.84 E-value=0.00029 Score=59.87 Aligned_cols=41 Identities=24% Similarity=0.734 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCCCCCC
Q psy11059 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNIDDCE 429 (429)
Q Consensus 388 ~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i~~C~ 429 (429)
++|.+.+|.++++|++..++|+|.|++||+|..||+.+ +|.
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~-~c~ 160 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVR-DDD 160 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEEC-C--
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccCc-ccC
Confidence 34566677777788887778888888888888887543 663
No 96
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.76 E-value=0.0019 Score=62.31 Aligned_cols=95 Identities=24% Similarity=0.534 Sum_probs=59.2
Q ss_pred CCCCcE-eccCCCCCeeEeCCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCcc----CCCCCCCCCCCCCCC-eeCC
Q psy11059 235 CQNGGK-CNEDETGNYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSV----ELTGCVGPDTCLNGG-TCKP 308 (429)
Q Consensus 235 C~~~g~-C~~~~~~~~~C~C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~~----~~~~C~~~~~C~~~~-~C~~ 308 (429)
|..++. |..+....+.|.|..+|+|..|+ .|.+||.+..+.. ....|.. ..|..++ .|..
T Consensus 257 Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce-------------~C~~gy~~~p~~~g~~~~~~~C~~-C~Cn~~g~~C~~ 322 (375)
T 4aqt_A 257 CNGHASECVKNEFDKLMCNCKHNTYGVDCE-------------KCLPFFNDRPWRRATAESASECLP-CDCNGRSQECYF 322 (375)
T ss_dssp CTTSCSCEEECTTSCEEECCCTTEESTTSC-------------EECTTCCSSCCCCCCSSCCCCCCC-CCGGGSCSCEEE
T ss_pred CCCCCcccCCCCCCCeeeeCcCCCcCCCcc-------------cCCCCCcCCCCCCCccCCCCCCCC-CcCcCCCCCccc
Confidence 334443 33455667889999999999998 4677887765421 1233443 4443322 2210
Q ss_pred --ccccCCCCCeee-eCCCCccCCCCcccccCCCccCCCC
Q psy11059 309 --YLVDETQHRFNC-TCPSGYHGKICEKCFCRPGFAGDHC 345 (429)
Q Consensus 309 --~~~~~~~~~~~C-~C~~G~~G~~C~~C~C~~g~~g~~C 345 (429)
....-...++.| .|+++|.|..|+ .|.+||+|...
T Consensus 323 d~~~~~c~~~~G~C~~C~~n~~G~~Ce--~C~~Gyyg~~~ 360 (375)
T 4aqt_A 323 DPELYRSTGHGGHCTNCRDNTDGAKCE--RCRENFFRLGN 360 (375)
T ss_dssp CHHHHHHSSCCEEECSCTTTEESTTSC--EECSSEECCTT
T ss_pred ccccCccCCCCCCCCCCCCCCcCCCCC--CCCcCcccCcC
Confidence 000012456789 599999999999 68999998753
No 97
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.73 E-value=0.00092 Score=53.95 Aligned_cols=33 Identities=36% Similarity=0.736 Sum_probs=28.2
Q ss_pred CCCCCCEeccCCC--Cce-EEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 18 PCQNGGKCNEDET--GNY-DCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 18 ~C~~~g~C~~~~~--~~~-~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
||+|+|+|+ +.. .+| +|.|++||+ |..|+++++
T Consensus 2 pC~nggtC~-~~~~~~~~~~C~Cp~g~~------------G~~Ce~~~~ 37 (122)
T 2fd6_A 2 DCLNGGTCV-SNKYFSNIHWCNCPKKFG------------GQHCEIDKS 37 (122)
T ss_dssp CCCSSCEEE-ECTTTTTCEEEECCTTEE------------STTSCEESS
T ss_pred CCCCcCCcC-CCcccCCCCCccCCCCCC------------CccccccCc
Confidence 899999998 663 556 999999999 999997764
No 98
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.68 E-value=0.00043 Score=47.87 Aligned_cols=30 Identities=37% Similarity=0.969 Sum_probs=20.2
Q ss_pred CCCCCCEEc--c--CCCCeeeeCCCCCCCCCCCC
Q psy11059 394 PCLHGATCI--D--EVATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 394 ~C~~~~~C~--~--~~~~~~C~C~~g~~G~~C~~ 423 (429)
+|.++|+|+ . ....|.|.|++||+|.+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 677777776 2 33456777777777777764
No 99
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.53 E-value=0.0014 Score=44.29 Aligned_cols=32 Identities=28% Similarity=0.751 Sum_probs=24.5
Q ss_pred CCCCCCCC----------CCCCCCCEEccCCCCeeeeCCCCCCC
Q psy11059 385 ININECES----------SPCLHGATCIDEVATFSCVCPKGLTG 418 (429)
Q Consensus 385 ~~~~~C~~----------~~C~~~~~C~~~~~~~~C~C~~g~~G 418 (429)
++|++|.. .+|. ++|++++++|+|.|++||++
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEE
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeE
Confidence 36677764 4675 38999999999999999874
No 100
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.51 E-value=0.00079 Score=46.54 Aligned_cols=31 Identities=26% Similarity=0.598 Sum_probs=26.4
Q ss_pred CCCCCCEecc-C--CCCceEEecCCCCcccccccccCcCCCCCCCC
Q psy11059 18 PCQNGGKCNE-D--ETGNYDCTCDALHTVCCVGLANQTLGSIHCET 60 (429)
Q Consensus 18 ~C~~~g~C~~-~--~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~ 60 (429)
||.|+|+|+. + ..+.|.|.|++||+ |.+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~------------G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFM------------GQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEE------------SSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCc------------cCCCcc
Confidence 8999999982 1 45679999999999 999985
No 101
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.43 E-value=0.00091 Score=68.15 Aligned_cols=39 Identities=31% Similarity=0.761 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCCCCEeccC-CCCceEEecC-CCCcccccccccCcCCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNED-ETGNYDCTCD-ALHTVCCVGLANQTLGSIHCETPI 62 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~-~~~~~~C~C~-~g~~g~~~~~~~~~~~G~~C~~~~ 62 (429)
+|+| .++||+|+|+|+ + ..++|+|.|. +||+ |..||...
T Consensus 2 ~d~C--~~~PC~ngG~C~-~~~~~~y~C~C~~~G~~------------G~~Ce~~~ 42 (553)
T 1q4g_A 2 VNPC--CYYPCQHQGICV-RFGLDRYQCDCTRTGYS------------GPNCTIPE 42 (553)
T ss_dssp CCGG--GGCCCCTTCEEE-EETTTEEEEECTTSSEE------------TTTTCEEC
T ss_pred CCcC--CCCCCCCCCCcC-CCCCCceEeeCCCCCcC------------CCCCCCCc
Confidence 5899 799999999999 8 8899999999 9999 99998754
No 102
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.40 E-value=0.00079 Score=57.13 Aligned_cols=37 Identities=27% Similarity=0.576 Sum_probs=31.1
Q ss_pred CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 16 RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 16 ~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
++||+++|+|+ +..++|+|+|++||+ |..||+. + +|+
T Consensus 124 ~~~C~~~g~C~-~~~~~~~c~C~~g~~------------G~~Ce~~-~--~c~ 160 (162)
T 1g1s_A 124 DMSCSKQGECL-ETIGNYTCSCYPGFY------------GPECEYV-R--DDD 160 (162)
T ss_dssp TTGGGGSEEEE-ECSSSEEEEECTTEE------------STTSCEE-C--C--
T ss_pred CCCCCCCCEEe-cCCCCceEeCCCCCc------------CcccccC-c--ccC
Confidence 46899999999 999999999999999 9999854 4 676
No 103
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.37 E-value=0.0011 Score=45.37 Aligned_cols=38 Identities=32% Similarity=0.736 Sum_probs=21.4
Q ss_pred CcCCCC--CcCCCCccccCCCceEEecCCCCC----CCCccCCCCCC
Q psy11059 350 DECLSN--PCFNGATCQNKINGYTCVCAPGYS----GKECSININEC 390 (429)
Q Consensus 350 ~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C 390 (429)
|||... +|. ..|++++|+|+|.|++||. |..|. ++++|
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec 45 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACI-PTGPY 45 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEE-ESSSS
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeec-cCccc
Confidence 455532 343 3666777777777777764 44553 55443
No 104
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=96.34 E-value=0.0061 Score=59.17 Aligned_cols=82 Identities=24% Similarity=0.511 Sum_probs=56.8
Q ss_pred CeeEeCCCCCcCCCCCCCccccCCCCeeeeCCCCCCCCCCc----cCCCCCCCCCCCCCCCe-eC--Cc------cc---
Q psy11059 248 NYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCS----VELTGCVGPDTCLNGGT-CK--PY------LV--- 311 (429)
Q Consensus 248 ~~~C~C~~g~~G~~C~~~~C~~~~~~~~C~C~~G~~g~~c~----~~~~~C~~~~~C~~~~~-C~--~~------~~--- 311 (429)
...|.|..+++|..|+ .|.+||.|.... .....|.. ..|..++. |. +. ..
T Consensus 285 ~g~C~C~hnT~G~~CE-------------rC~pGy~g~p~~~at~~~~~~C~p-C~Cnghs~~C~~d~~~~~~~~s~~~~ 350 (403)
T 2y38_A 285 RLQCACQHNTCGGSCD-------------RCCPGFNQQPWKPATTDSANECQS-CNCHGHAYDCYYDPEVDRREASQNQD 350 (403)
T ss_dssp CEEECCCTTEESSSCC-------------EECTTCCSSCCCCCCSSCCCCCCC-CCCTTSCSCEEECHHHHHTTCCCCTT
T ss_pred ceEeECcCcCcCCCCC-------------CCCccccCCcccccccCCCccccc-cccCCCCcccccCccccccccccccc
Confidence 3579999999999998 589999876421 12345765 66765543 51 00 00
Q ss_pred cCCCCCeeee-CCCCccCCCCcccccCCCccCCCC
Q psy11059 312 DETQHRFNCT-CPSGYHGKICEKCFCRPGFAGDHC 345 (429)
Q Consensus 312 ~~~~~~~~C~-C~~G~~G~~C~~C~C~~g~~g~~C 345 (429)
....+++.|. |+.++.|..|+ .|.+||+|..-
T Consensus 351 ~~~~~~G~C~~C~~nt~G~~CE--rC~~GYyg~p~ 383 (403)
T 2y38_A 351 NVYQGGGVCLDCQHHTTGINCE--RCLPGFFRAPD 383 (403)
T ss_dssp SCSCCCEEESSCCSSEESTTSC--EECTTCEECTT
T ss_pred ccCCCCCCCCCCcCcCcCCCCC--cCCCCccCCCC
Confidence 0024578995 99999999999 68899998754
No 105
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.33 E-value=0.00088 Score=44.99 Aligned_cols=38 Identities=18% Similarity=0.406 Sum_probs=29.9
Q ss_pred CCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 14 AQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 14 ~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
....+|+. .|+ ++.|+|+|.|++||+ ...+|..|+ +++
T Consensus 3 ~~ng~C~~--~C~-n~~gs~~C~C~~Gy~--------L~~d~~tC~-did 40 (51)
T 1kig_L 3 LDNGGCDQ--FCR-EERSEVRCSCAHGYV--------LGDDSKSCV-STE 40 (51)
T ss_dssp TTTTSSSS--CCC-EETTEECCCCCTTEE--------ECTTSSCEE-ECS
T ss_pred CCCCCcCC--EeE-cCCCCeEEeCCCCcE--------ECCCCCccc-cCC
Confidence 34556765 699 999999999999998 334588996 777
No 106
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.31 E-value=0.0013 Score=67.09 Aligned_cols=38 Identities=39% Similarity=0.948 Sum_probs=34.1
Q ss_pred CCCCCCCCCCCCCCCEeccC-CCCceEEecC-CCCcccccccccCcCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNED-ETGNYDCTCD-ALHTVCCVGLANQTLGSIHCETP 61 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~-~~~~~~C~C~-~g~~g~~~~~~~~~~~G~~C~~~ 61 (429)
+|+| .++||+|+|+|+ + ..++|.|.|+ +||+ |..|+.+
T Consensus 1 vd~C--~s~PC~ngG~C~-~~~~~~y~C~C~~~G~~------------G~~Ce~~ 40 (587)
T 3nt1_A 1 ANPC--CSNPCQNRGECM-STGFDQYKCDCTRTGFY------------GENCTTP 40 (587)
T ss_dssp CCTT--TTCCCCTTCEEE-EEETTEEEEECTTSSEE------------TTTTCEE
T ss_pred CCCC--CCCCCCCCCEee-CCCCCCeEEecCCCCcc------------CCCCCCc
Confidence 5899 799999999999 5 4589999999 9999 9999874
No 107
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.31 E-value=0.0023 Score=46.24 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=27.9
Q ss_pred CCCCCCCC-CCCCCCCCCeEeeCCCCCCeeee-CCCCCc
Q psy11059 61 PISNQICT-TAPPCLNGATCRPQLTEQLYECV-CPPGYK 97 (429)
Q Consensus 61 ~~~~~~C~-~~~~C~~~g~C~~~~~~~~~~C~-C~~Gy~ 97 (429)
+|| ||. ..++|.++++|+ ++.++|+|. +..||.
T Consensus 2 Did--EC~~~~~~C~~~~~C~--Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 2 DVN--ECLTIPEACKGEMKCI--NHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CSC--CTTCCCCSCTTEEEEE--ETTCCEEEEETTSCCC
T ss_pred ccc--cccCCCCCCCCCCEeE--CCCCCeEecccCCccc
Confidence 677 897 457899889999 999999997 567887
No 108
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.91 E-value=0.0078 Score=45.75 Aligned_cols=70 Identities=29% Similarity=0.626 Sum_probs=50.7
Q ss_pred CCCCCCCCCCCCeeCCccccCCCCCeeeeCCCCccCCCCcccccCCCccCCCCccCC-CcCCCCC--cCCCCccccCC--
Q psy11059 293 GCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDF-DECLSNP--CFNGATCQNKI-- 367 (429)
Q Consensus 293 ~C~~~~~C~~~~~C~~~~~~~~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~~~i-~~C~~~~--C~~~~~C~~~~-- 367 (429)
.|.. ..|..++.| +....+...|+|.+||.++ |..|..+. ..|..+. |..+|.|+...
T Consensus 6 ~C~~-~~C~~NA~C----~r~~~g~e~C~C~~gy~gd------------g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~ 68 (99)
T 1ob1_C 6 QCVK-KQCPQNSGC----FRHLDEREECKCLLNYKQE------------GDKCVENPNPTCNENNGGCDADAKCTEEDSG 68 (99)
T ss_dssp CCCS-CCCCTTEEE----ECCTTSCCEEEECTTEEEE------------TTEEEECSCCCSTTGGGGCCTTEEEECCSCS
T ss_pred Eecc-CCCCCCCCe----EEcCCCCEEEEecCCeecC------------CCeEeeCCCCChhhcCCCcCCCceeEecCCc
Confidence 3544 667788899 5557788999999999875 55565332 4676543 88889998764
Q ss_pred ---CceEEecCCCCC
Q psy11059 368 ---NGYTCVCAPGYS 379 (429)
Q Consensus 368 ---g~~~C~C~~G~~ 379 (429)
+...|.|.+||.
T Consensus 69 ~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 69 SNGKKITCECTKPDS 83 (99)
T ss_dssp SSSCCCEEEECSTTC
T ss_pred ccCCceEeEeCCCCc
Confidence 567899998875
No 109
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.75 E-value=0.003 Score=42.72 Aligned_cols=43 Identities=23% Similarity=0.611 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCEeccCCCC-ceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 12 CDAQRNPCQNGGKCNEDETG-NYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 12 C~~~~~~C~~~g~C~~~~~~-~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
|+.....|+. .|+ ++.+ +|+|.|++||+ ...+|..|+ +++ +|.
T Consensus 2 C~~~nggC~~--~C~-n~~ggs~~C~C~~Gy~--------L~~Dg~tC~-d~d--ec~ 45 (53)
T 2bz6_L 2 CVNENGGCEQ--YCS-DHTGTKRSCRCHEGYS--------LLADGVSCT-PTV--EYP 45 (53)
T ss_dssp TTSGGGGCSS--EEE-EETTTEEEEECCTTEE--------ECTTSSCEE-ECS--SSC
T ss_pred CcCCCCCcCC--EeE-cCCCCCEEeeCCCCCE--------ECCCCCccc-CCc--ccc
Confidence 4333445755 699 8888 89999999998 345689996 777 664
No 110
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.71 E-value=0.0038 Score=44.73 Aligned_cols=41 Identities=29% Similarity=0.642 Sum_probs=26.3
Q ss_pred cCCCcCCCCC--cCCCCccccCCC-ceEEecCCCCC----CCCccCCCCCC
Q psy11059 347 VDFDECLSNP--CFNGATCQNKIN-GYTCVCAPGYS----GKECSININEC 390 (429)
Q Consensus 347 ~~i~~C~~~~--C~~~~~C~~~~g-~~~C~C~~G~~----G~~C~~~~~~C 390 (429)
+++++|.... |. ..|+++++ +|+|.|++||. |+.|. +++++
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCccc-Ccccc
Confidence 4677776432 43 36777777 68888888874 55663 56554
No 111
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=95.50 E-value=0.0072 Score=41.79 Aligned_cols=40 Identities=20% Similarity=0.587 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCCEeccCCC-CceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 12 CDAQRNPCQNGGKCNEDET-GNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 12 C~~~~~~C~~~g~C~~~~~-~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
|+.....|+. .|+ +.. |+|+|.|++||. ...+|..|+ +++
T Consensus 2 C~~~nggC~~--~C~-n~~~gs~~C~C~~Gy~--------L~~D~~tC~-d~~ 42 (59)
T 2wph_E 2 CNIKNGRCEQ--FCK-NSADNKVVCSCTEGYR--------LAENQKSCE-PAV 42 (59)
T ss_dssp TTTGGGGCSS--EEE-ECSTTCEEEECCTTEE--------ECTTSSCEE-ESS
T ss_pred CcCCCCCcCC--EeE-eCCCCCEEeeCCCCcE--------ECCCCCccc-CCC
Confidence 4333445655 799 888 699999999998 445688896 555
No 112
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.23 E-value=0.004 Score=52.32 Aligned_cols=38 Identities=24% Similarity=0.840 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCC
Q psy11059 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNI 425 (429)
Q Consensus 388 ~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i 425 (429)
++|.+.||.+++.|.+....|.|.|.+||+|++||++|
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence 34566778888888888888889999999999988765
No 113
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.09 E-value=0.0042 Score=57.12 Aligned_cols=42 Identities=24% Similarity=0.733 Sum_probs=31.6
Q ss_pred cCCCcCC--CCCcCCCCccccCCCceEEecCCCCC--CCCccCCCCC
Q psy11059 347 VDFDECL--SNPCFNGATCQNKINGYTCVCAPGYS--GKECSININE 389 (429)
Q Consensus 347 ~~i~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~--G~~C~~~~~~ 389 (429)
.++|||. ..+|..++.|+|+.|+|.|.|++||. |..|. ++|+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCCC
Confidence 3788997 45799999999999999999999998 66774 5544
No 114
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.05 E-value=0.014 Score=48.39 Aligned_cols=58 Identities=26% Similarity=0.682 Sum_probs=38.3
Q ss_pred CcCCCCccccC--CCce-EEecCCCCCCCCccCCCCCCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCC
Q psy11059 356 PCFNGATCQNK--INGY-TCVCAPGYSGKECSININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCE 422 (429)
Q Consensus 356 ~C~~~~~C~~~--~g~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~ 422 (429)
||.++++|+.. ...+ +|.|++||.|+.|++++++ .|..+ ....|+......++|..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----~C~~g-----~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----TCYEG-----NGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----CEECT-----TCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----cCCCC-----CccccccceecCCcCCccc
Confidence 79999999765 2455 8999999999999876542 22211 1224555555555666664
No 115
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.04 E-value=0.0072 Score=61.54 Aligned_cols=37 Identities=35% Similarity=0.967 Sum_probs=23.7
Q ss_pred CCcCCCCCcCCCCcccc-CCCceEEecC-CCCCCCCccC
Q psy11059 349 FDECLSNPCFNGATCQN-KINGYTCVCA-PGYSGKECSI 385 (429)
Q Consensus 349 i~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~C~~ 385 (429)
+++|.++||.++|+|++ ..++|+|.|+ +||+|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 35566666666666666 5666666666 6666666653
No 116
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.99 E-value=0.008 Score=43.84 Aligned_cols=32 Identities=34% Similarity=0.839 Sum_probs=22.8
Q ss_pred CCCCCCCCEEc--cCCCCeeeeCCCCCCCCCCCCC
Q psy11059 392 SSPCLHGATCI--DEVATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 392 ~~~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~~ 424 (429)
.+.|.++ +|+ ...+.+.|.|.+||+|.+|+..
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCccccccccc
Confidence 4667775 784 3345678888888888888753
No 117
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.94 E-value=0.012 Score=49.77 Aligned_cols=38 Identities=21% Similarity=0.687 Sum_probs=26.6
Q ss_pred CCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCCCCCC
Q psy11059 390 CESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNIDDC 428 (429)
Q Consensus 390 C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~i~~C 428 (429)
|.+.+|..+++|.+...+|+|.|.+||+|..|++ +.+|
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~-~~~c 159 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQF-VQVD 159 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCB-C---
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcccccccc-cccC
Confidence 4556777778888777788888888888888874 3354
No 118
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=94.86 E-value=0.01 Score=39.50 Aligned_cols=31 Identities=35% Similarity=0.713 Sum_probs=21.8
Q ss_pred CCCCCCCEEc--cCCCCeeeeCCCCCCCCCCCCC
Q psy11059 393 SPCLHGATCI--DEVATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 393 ~~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~~ 424 (429)
+.|.+ |+|. ...+.+.|+|++||+|.+||..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 45766 5774 4455678888888888888753
No 119
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.85 E-value=0.017 Score=47.92 Aligned_cols=33 Identities=36% Similarity=0.713 Sum_probs=27.8
Q ss_pred CCCCCCEeccCC--CCce-EEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 18 PCQNGGKCNEDE--TGNY-DCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 18 ~C~~~g~C~~~~--~~~~-~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
||+|+|+|+ .. ...+ +|.|++||. |..|+++++
T Consensus 14 pC~NGGtC~-~~~~~s~~~~C~Cp~g~~------------G~~Cei~~~ 49 (145)
T 2i9a_A 14 DCLNGGTCV-SNKYFSNIHWCNCPKKFG------------GQHCEIDKS 49 (145)
T ss_dssp CCCTTCEEE-ECSSSTTCEEEECCTTEE------------STTSCEESS
T ss_pred CCCCCCCcC-CCccccCCccccCCCCCC------------CCceecccc
Confidence 899999998 44 3455 899999999 999997765
No 120
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.78 E-value=0.03 Score=37.10 Aligned_cols=30 Identities=23% Similarity=0.770 Sum_probs=22.7
Q ss_pred CCCCCCCEEc--cCCCCeeeeCCCCCCCCCCCC
Q psy11059 393 SPCLHGATCI--DEVATFSCVCPKGLTGRLCET 423 (429)
Q Consensus 393 ~~C~~~~~C~--~~~~~~~C~C~~g~~G~~C~~ 423 (429)
+.|.+ |+|. ...+.+.|+|++||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 45776 4886 455678899999999999874
No 121
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=94.54 E-value=0.03 Score=37.07 Aligned_cols=31 Identities=26% Similarity=0.643 Sum_probs=22.8
Q ss_pred CCCCCCcEecc-CCCCCeeEeCCCCCcCCCCCC
Q psy11059 233 NPCQNGGKCNE-DETGNYDCTCDALHTGDPCKH 264 (429)
Q Consensus 233 ~~C~~~g~C~~-~~~~~~~C~C~~g~~G~~C~~ 264 (429)
+.|.++ +|.. .....+.|.|++||+|..|+.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 567775 8843 344668888888888888875
No 122
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.47 E-value=0.018 Score=48.57 Aligned_cols=37 Identities=24% Similarity=0.552 Sum_probs=30.0
Q ss_pred CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC
Q psy11059 16 RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT 68 (429)
Q Consensus 16 ~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~ 68 (429)
+++|+++|+|+ +..++|.|.|.+||+ |..|++++ +|.
T Consensus 124 ~~~C~~~g~C~-~~~~~~~c~C~~g~~------------g~~C~~~~---~c~ 160 (164)
T 3cfw_A 124 PWSCSGHGECV-EIINNYTCNCDVGYY------------GPQCQFVQ---VDP 160 (164)
T ss_dssp TTSSCSSEEEE-EETTEEEEEECTTCB------------SSSSCBC-------
T ss_pred CCcCCCCCeec-ccCCCceeeeCCCcc------------cccccccc---cCc
Confidence 57899999999 889999999999999 99998543 565
No 123
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.47 E-value=0.012 Score=42.81 Aligned_cols=40 Identities=23% Similarity=0.538 Sum_probs=28.1
Q ss_pred CCCCCCC-CCCCCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCC
Q psy11059 8 LSSPCDA-QRNPCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCET 60 (429)
Q Consensus 8 ~~~~C~~-~~~~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~ 60 (429)
..++|.. ..+.|.|+ +|+. ...+.+.|.|.+||+ |..|+.
T Consensus 36 ~~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYt------------G~RCE~ 77 (79)
T 1xdt_R 36 KRDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYH------------GERCHG 77 (79)
T ss_dssp ---CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEE------------STTCCE
T ss_pred cCCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcc------------cccccc
Confidence 3567831 26899995 9952 334678999999999 998874
No 124
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.47 E-value=0.058 Score=41.27 Aligned_cols=71 Identities=24% Similarity=0.555 Sum_probs=53.3
Q ss_pred cCCCCCcCCCCcccc-CCCceEEecCCCCC--CCCccCCCCC-CCCC--CCCCCCEEccCC-CCeeeeCCCCCC-----C
Q psy11059 351 ECLSNPCFNGATCQN-KINGYTCVCAPGYS--GKECSININE-CESS--PCLHGATCIDEV-ATFSCVCPKGLT-----G 418 (429)
Q Consensus 351 ~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~--G~~C~~~~~~-C~~~--~C~~~~~C~~~~-~~~~C~C~~g~~-----G 418 (429)
.|....|..++.|.. .+|..+|+|..||. |..|..+ ++ |..+ -|...|+|+.+. ....|.|.++|+ |
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~G 90 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEG 90 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGG
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccce
Confidence 344445778889987 67888999999997 5577544 66 6543 499999998774 688999999854 6
Q ss_pred CCCC
Q psy11059 419 RLCE 422 (429)
Q Consensus 419 ~~C~ 422 (429)
..|.
T Consensus 91 vfC~ 94 (105)
T 1n1i_A 91 VFCS 94 (105)
T ss_dssp TEEC
T ss_pred EEEC
Confidence 6665
No 125
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.46 E-value=0.016 Score=55.85 Aligned_cols=30 Identities=27% Similarity=0.536 Sum_probs=25.4
Q ss_pred CCCCeeeeCCCCccCCCCcccccCCCccCCCC
Q psy11059 314 TQHRFNCTCPSGYHGKICEKCFCRPGFAGDHC 345 (429)
Q Consensus 314 ~~~~~~C~C~~G~~G~~C~~C~C~~g~~g~~C 345 (429)
....+.|.|+++|.|..|+ .|.+||++..+
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce--~C~~gy~~~p~ 297 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCE--KCLPFFNDRPW 297 (375)
T ss_dssp TTSCEEECCCTTEESTTSC--EECTTCCSSCC
T ss_pred CCCCeeeeCcCCCcCCCcc--cCCCCCcCCCC
Confidence 5567889999999999999 67889988754
No 126
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.43 E-value=0.04 Score=36.49 Aligned_cols=31 Identities=26% Similarity=0.684 Sum_probs=23.1
Q ss_pred CCCCCCcEec-cCCCCCeeEeCCCCCcCCCCCC
Q psy11059 233 NPCQNGGKCN-EDETGNYDCTCDALHTGDPCKH 264 (429)
Q Consensus 233 ~~C~~~g~C~-~~~~~~~~C~C~~g~~G~~C~~ 264 (429)
+.|.+ |+|. ....+.+.|.|+.||+|..|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 46776 5884 3556678899999999988874
No 127
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.29 E-value=0.017 Score=58.97 Aligned_cols=37 Identities=35% Similarity=0.965 Sum_probs=29.9
Q ss_pred CCcCCCCCcCCCCcccc-CCCceEEecC-CCCCCCCccC
Q psy11059 349 FDECLSNPCFNGATCQN-KINGYTCVCA-PGYSGKECSI 385 (429)
Q Consensus 349 i~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~C~~ 385 (429)
+++|.++||.++|+|++ ..++|.|.|+ +||+|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 46788888888888885 4578888888 8888888864
No 128
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.26 E-value=0.011 Score=39.53 Aligned_cols=28 Identities=29% Similarity=0.727 Sum_probs=18.3
Q ss_pred ccccCCCceEEecCCCCC----CCCccCCCCCC
Q psy11059 362 TCQNKINGYTCVCAPGYS----GKECSININEC 390 (429)
Q Consensus 362 ~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C 390 (429)
.|++++++|+|.|++||. |..|. +++++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~-dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCV-STERF 42 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccc-cCCcc
Confidence 577777777777777774 45663 55553
No 129
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=93.75 E-value=0.021 Score=38.41 Aligned_cols=17 Identities=29% Similarity=0.884 Sum_probs=8.1
Q ss_pred ccccCCC-ceEEecCCCC
Q psy11059 362 TCQNKIN-GYTCVCAPGY 378 (429)
Q Consensus 362 ~C~~~~g-~~~C~C~~G~ 378 (429)
.|+++++ +|+|.|++||
T Consensus 12 ~C~n~~ggs~~C~C~~Gy 29 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGY 29 (53)
T ss_dssp EEEEETTTEEEEECCTTE
T ss_pred EeEcCCCCCEEeeCCCCC
Confidence 3444444 3455555554
No 130
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.54 E-value=0.042 Score=36.40 Aligned_cols=38 Identities=26% Similarity=0.596 Sum_probs=29.0
Q ss_pred CCCCC-CCCCCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCC
Q psy11059 10 SPCDA-QRNPCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCET 60 (429)
Q Consensus 10 ~~C~~-~~~~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~ 60 (429)
.+|.. ..+.|.| |+|.. ...+.+.|.|++||+ |..||.
T Consensus 6 ~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gy~------------G~RCe~ 45 (50)
T 1iox_A 6 SRCPKQYKHYCIK-GRCRFVVAEQTPSCVCDEGYI------------GARCER 45 (50)
T ss_dssp EECCGGGTTSCTT-CCEEEETTTTEEEECCCTTEE------------TTTTCE
T ss_pred cccChhhcCcccC-CEEEeEcCCCCeEEECCCCcc------------cCCCCe
Confidence 35532 3578999 89952 556789999999999 999984
No 131
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.38 E-value=0.021 Score=47.80 Aligned_cols=38 Identities=37% Similarity=0.943 Sum_probs=33.6
Q ss_pred CcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCC
Q psy11059 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSINI 387 (429)
Q Consensus 350 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~ 387 (429)
.+|...||.+++.|.+....|.|.|.+||+|..|+++|
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence 56777889999999999999999999999999997543
No 132
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.09 E-value=0.067 Score=35.37 Aligned_cols=33 Identities=21% Similarity=0.523 Sum_probs=26.4
Q ss_pred CCCCCCCCCEecc-CCCCceEEecCCCCcccccccccCcCCCCCCCC
Q psy11059 15 QRNPCQNGGKCNE-DETGNYDCTCDALHTVCCVGLANQTLGSIHCET 60 (429)
Q Consensus 15 ~~~~C~~~g~C~~-~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~ 60 (429)
..+.|.|+ +|.. ...+.+.|.|++||+ |..|+.
T Consensus 12 ~~~yC~nG-~C~~~~~~~~~~C~C~~gy~------------G~RCe~ 45 (50)
T 3e50_C 12 HTQFCFHG-TCRFLVQEDKPACVCHSGYV------------GARCEH 45 (50)
T ss_pred hcCcccCC-EEeeccCCCCeEEECCCCCc------------ccCCCc
Confidence 35689986 9983 234789999999999 999974
No 133
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.65 E-value=0.064 Score=52.51 Aligned_cols=38 Identities=29% Similarity=0.808 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCCCEeccCCCCceEEecCC-CCcccccccccCcCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNEDETGNYDCTCDA-LHTVCCVGLANQTLGSIHCETP 61 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~-g~~g~~~~~~~~~~~G~~C~~~ 61 (429)
.++| ..+||.|+|+|+ +..++|.|.|+. ||. |..|+.+
T Consensus 185 ~~~C--~~~pC~n~g~C~-~~~~~~~C~C~~~~~~------------G~~C~~~ 223 (410)
T 3asi_A 185 STTC--QEDSCSNQGVCL-QQWDGFSCDCSMTSFS------------GPLCNDP 223 (410)
T ss_dssp SSCC--CTTSSSTTCEEE-ECSSSEEEECTTTSEE------------STTSCEE
T ss_pred CCCc--ccccCCCCCEec-CCCCCceEeccCCccc------------CCCCCCC
Confidence 4789 789999999999 889999999996 999 9999854
No 134
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.30 E-value=0.086 Score=51.58 Aligned_cols=38 Identities=26% Similarity=0.783 Sum_probs=25.2
Q ss_pred CCCCCCCCCCCCCEEccCCCCeeeeCCC-CCCCCCCCCC
Q psy11059 387 INECESSPCLHGATCIDEVATFSCVCPK-GLTGRLCETN 424 (429)
Q Consensus 387 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~-g~~G~~C~~~ 424 (429)
.+.|...||.++++|+....+|.|.|+. +|+|..|+.+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 4556666777777776666667777764 6777777643
No 135
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.09 E-value=0.032 Score=47.52 Aligned_cols=45 Identities=31% Similarity=0.822 Sum_probs=31.2
Q ss_pred CCCCCCCccCCCCCCCCCC-----CCCCCEEccCCCCeeeeCCCCCC----CCCCC
Q psy11059 376 PGYSGKECSININECESSP-----CLHGATCIDEVATFSCVCPKGLT----GRLCE 422 (429)
Q Consensus 376 ~G~~G~~C~~~~~~C~~~~-----C~~~~~C~~~~~~~~C~C~~g~~----G~~C~ 422 (429)
.||.+.....++++|...+ |.+ .|+++.++|+|.|++||+ |..|.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 4555555445677886543 655 688888888899988887 55554
No 136
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=91.43 E-value=0.16 Score=43.42 Aligned_cols=28 Identities=32% Similarity=0.774 Sum_probs=22.7
Q ss_pred CCCCCCcEeccCCCCCeeEeCCCCCcCCCCCC
Q psy11059 233 NPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264 (429)
Q Consensus 233 ~~C~~~g~C~~~~~~~~~C~C~~g~~G~~C~~ 264 (429)
.+|.++|.| . +-.+|.|++||+|..|+.
T Consensus 153 ~~C~ngG~C-v---~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 153 GGCRNGGFC-N---ERRICECPDGFHGPHCEG 180 (188)
T ss_dssp TCCCTTCEE-C---TTSCEECCTTCBTTTTCB
T ss_pred CCCCCCCEe-C---CCCcccCcCCCCCCCCcC
Confidence 379999999 2 345799999999999874
No 137
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.26 E-value=0.045 Score=46.51 Aligned_cols=44 Identities=36% Similarity=0.924 Sum_probs=33.1
Q ss_pred CCccCCCCccCCCcCCCCC-----cCCCCccccCCCceEEecCCCCC----CCCc
Q psy11059 338 PGFAGDHCDVDFDECLSNP-----CFNGATCQNKINGYTCVCAPGYS----GKEC 383 (429)
Q Consensus 338 ~g~~g~~C~~~i~~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~----G~~C 383 (429)
.||.+.....++++|...+ |.. .|++..++|.|.|++||+ +..|
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C 165 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTC 165 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCcc
Confidence 3555555555788997644 654 799999999999999997 4555
No 138
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.89 E-value=0.16 Score=43.41 Aligned_cols=32 Identities=38% Similarity=0.951 Sum_probs=25.4
Q ss_pred CCCCCCCCCCCEEccCCCCeeeeCCCCCCCCCCCCC
Q psy11059 389 ECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETN 424 (429)
Q Consensus 389 ~C~~~~C~~~~~C~~~~~~~~C~C~~g~~G~~C~~~ 424 (429)
.|. .+|.++|.|+.. .+|.|++||+|..|++.
T Consensus 150 ~C~-~~C~ngG~Cv~P---~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 150 ECP-GGCRNGGFCNER---RICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCT-TCCCTTCEECTT---SCEECCTTCBTTTTCBC
T ss_pred ccC-CCCCCCCEeCCC---CcccCcCCCCCCCCcCC
Confidence 444 579999999653 37999999999999864
No 139
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=89.61 E-value=0.2 Score=56.25 Aligned_cols=45 Identities=24% Similarity=0.686 Sum_probs=37.9
Q ss_pred ccCCCCCCCCCCCCCCCEEccCCCCeeeeCC-CCCCCCCCCCCCCC
Q psy11059 383 CSININECESSPCLHGATCIDEVATFSCVCP-KGLTGRLCETNIDD 427 (429)
Q Consensus 383 C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~-~g~~G~~C~~~i~~ 427 (429)
|....+.|...||.++|+|+....+|.|.|+ ++|+|..|+.++.+
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~~~ 1058 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTT 1058 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCCCE
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCCce
Confidence 4333467888999999999999899999999 69999999987643
No 140
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=89.21 E-value=0.46 Score=46.03 Aligned_cols=66 Identities=30% Similarity=0.710 Sum_probs=42.5
Q ss_pred CeeeeCCCCccCCCCcccccCCCccCCCCc----cCCCcCCCCCcCCCC-cccc----------------CCCceEEe-c
Q psy11059 317 RFNCTCPSGYHGKICEKCFCRPGFAGDHCD----VDFDECLSNPCFNGA-TCQN----------------KINGYTCV-C 374 (429)
Q Consensus 317 ~~~C~C~~G~~G~~C~~C~C~~g~~g~~C~----~~i~~C~~~~C~~~~-~C~~----------------~~g~~~C~-C 374 (429)
...|.|+.++.|..|+ .|.+||+|..-. ...+.|..-+|.+++ .|.. ..++.+|. |
T Consensus 285 ~g~C~C~hnT~G~~CE--rC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C 362 (403)
T 2y38_A 285 RLQCACQHNTCGGSCD--RCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDC 362 (403)
T ss_dssp CEEECCCTTEESSSCC--EECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSC
T ss_pred ceEeECcCcCcCCCCC--CCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCC
Confidence 3579999999999999 789999986311 123456554565544 3521 12345774 7
Q ss_pred CCCCCCCCcc
Q psy11059 375 APGYSGKECS 384 (429)
Q Consensus 375 ~~G~~G~~C~ 384 (429)
+.+++|..|+
T Consensus 363 ~~nt~G~~CE 372 (403)
T 2y38_A 363 QHHTTGINCE 372 (403)
T ss_dssp CSSEESTTSC
T ss_pred cCcCcCCCCC
Confidence 7777777664
No 141
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=88.03 E-value=0.27 Score=55.20 Aligned_cols=39 Identities=28% Similarity=0.760 Sum_probs=34.5
Q ss_pred CCCCCCCCCCCCCCCEeccCCCCceEEecC-CCCcccccccccCcCCCCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNEDETGNYDCTCD-ALHTVCCVGLANQTLGSIHCETPI 62 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~-~g~~g~~~~~~~~~~~G~~C~~~~ 62 (429)
.+.| ..+||.|+|+|+ ....+|.|.|+ +||+ |..|+.+.
T Consensus 1017 ~~~C--~~~pC~ngG~C~-~~~~~~~C~C~~~g~~------------G~~C~~~~ 1056 (1245)
T 3qcw_A 1017 STTC--QEDSCSNQGVCL-QQWDGFSCDCSMTSFS------------GPLCNDPG 1056 (1245)
T ss_dssp CCCC--CTTSSSSSCEEE-EETTEEEEECTTSSCB------------STTSCBCC
T ss_pred cCce--ECCcCCCCCEeC-CCCCCCEEECCCCCCC------------CCCccCCC
Confidence 3689 789999999999 88889999999 6999 99998654
No 142
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=86.56 E-value=0.34 Score=44.62 Aligned_cols=59 Identities=27% Similarity=0.720 Sum_probs=39.9
Q ss_pred cCCCCccccCCCceEEecCCCCCCCCccCCCC---------CCCCC----CCCCCCEEccCCCCeeeeCCCCC------C
Q psy11059 357 CFNGATCQNKINGYTCVCAPGYSGKECSININ---------ECESS----PCLHGATCIDEVATFSCVCPKGL------T 417 (429)
Q Consensus 357 C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~---------~C~~~----~C~~~~~C~~~~~~~~C~C~~g~------~ 417 (429)
|..+|++.-. .|+|.+||+|..|+-..+ .|... .|..+|+|+-. +|+|.++| .
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~~ 269 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIY 269 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTTCEEE
T ss_pred cCCCCeECCC----ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCCeeEe
Confidence 5555555432 799999999999862211 46422 48778888654 79997775 5
Q ss_pred CCCCCC
Q psy11059 418 GRLCET 423 (429)
Q Consensus 418 G~~C~~ 423 (429)
|.+|+.
T Consensus 270 G~~~~~ 275 (280)
T 2p26_A 270 GQYCEH 275 (280)
T ss_dssp STTSCE
T ss_pred eEeccc
Confidence 777763
No 143
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=86.44 E-value=0.3 Score=45.03 Aligned_cols=44 Identities=20% Similarity=0.507 Sum_probs=33.0
Q ss_pred CCCCCCCC-CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 8 LSSPCDAQ-RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 8 ~~~~C~~~-~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
+.|||+.. ...|.. .|. ++.++|+|.|.+||. ...++..|. +.+
T Consensus 1 ~~~eC~~~~~~~C~~--~C~-~~~~~~~C~C~~G~~--------l~~d~~sC~-p~~ 45 (283)
T 3f1s_B 1 AKNECHPERTDGCQH--FCL-PGQESYTCSCAQGYR--------LGEDHKQCV-PHD 45 (283)
T ss_dssp --CCCCSSCSSSCSS--BCC-CCTTSCCCBCCTTEE--------ECTTSSCEE-ECS
T ss_pred CCCccCCCCCCCCCC--Eee-CCCCCeEecCCCCcc--------cCCCCCccc-ccc
Confidence 36899655 568876 698 999999999999998 445577786 444
No 144
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=85.09 E-value=1.5 Score=32.59 Aligned_cols=73 Identities=15% Similarity=0.294 Sum_probs=54.0
Q ss_pred CCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCCCCC-CCCCCCCCCeEeeCCCCCCee
Q psy11059 11 PCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQICT-TAPPCLNGATCRPQLTEQLYE 89 (429)
Q Consensus 11 ~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~~C~-~~~~C~~~g~C~~~~~~~~~~ 89 (429)
-| ....|..++.|.....+.-.|.|..+|.-+ |..|..+.+. .|. ....|..+++|.... ...-.
T Consensus 6 ~C--~~tkcp~NA~Cyr~~dg~EecRCllnykk~----------~~kCV~~~~~-~C~~NNGGCd~nA~C~~~~-~~kIv 71 (95)
T 1b9w_A 6 RC--IDTNVPENAACYRYLDGTEEWRCLLYFKED----------AGKCVPAPNM-TCKDKNGGCAPEAECKMND-KNEIV 71 (95)
T ss_dssp SC--SSCCCCTTEEEEECTTSCEEEEECTTEEEE----------TTEEEECTTC-CTTTGGGGSCTTSEEEECT-TSCEE
T ss_pred cc--ccCCCCCCcCeEEEcCCCEEEEEECCeEec----------CCEEEcCCCC-CccccCCCcCCCcceeecC-CCcEE
Confidence 46 344889999999445678899999999954 8888755432 576 355688889999333 26789
Q ss_pred eeCCCCCc
Q psy11059 90 CVCPPGYK 97 (429)
Q Consensus 90 C~C~~Gy~ 97 (429)
|.|...|.
T Consensus 72 C~C~~~~~ 79 (95)
T 1b9w_A 72 CKCTKEGS 79 (95)
T ss_dssp EECCSTTE
T ss_pred EECCCCCC
Confidence 99998865
No 145
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.07 E-value=0.38 Score=45.70 Aligned_cols=39 Identities=21% Similarity=0.613 Sum_probs=22.3
Q ss_pred CCCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCC
Q psy11059 9 SSPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCE 59 (429)
Q Consensus 9 ~~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~ 59 (429)
+|||+ ....|+. .|+ ++.|+|+|.|.+||. ...++..|.
T Consensus 1 i~ec~-~~~~C~~--~C~-n~~g~~~C~C~~g~~--------l~~d~~~C~ 39 (349)
T 3v64_C 1 VNECA-EEGYCSQ--GCT-NSEGAFQCWCEAGYE--------LRPDRRSCK 39 (349)
T ss_dssp ---------CCSS--EEC-CC---CCEECCTTEE--------ECTTSSCEE
T ss_pred CcccC-CCCCCcC--eee-cCCCCeEEECCCCcc--------CCCCCCccc
Confidence 57895 5567877 899 999999999999998 233466674
No 146
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=83.88 E-value=0.7 Score=46.06 Aligned_cols=45 Identities=18% Similarity=0.442 Sum_probs=36.1
Q ss_pred CCCCCCC-CCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCC
Q psy11059 9 SSPCDAQ-RNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPIS 63 (429)
Q Consensus 9 ~~~C~~~-~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~ 63 (429)
++.|... .+||+.++.|+....+.|+|.|+.||.|. |..|..+.+
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~----------G~~c~~D~D 63 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGN----------GILCGRDTD 63 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESS----------SSSCEECTT
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCC----------CcccCccCC
Confidence 3568653 47999999999666788999999999988 888875543
No 147
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=83.47 E-value=0.44 Score=32.57 Aligned_cols=23 Identities=26% Similarity=0.749 Sum_probs=18.9
Q ss_pred CCCCCCCeEeeCCCC-CCeeeeCCCCCc
Q psy11059 71 PPCLNGATCRPQLTE-QLYECVCPPGYK 97 (429)
Q Consensus 71 ~~C~~~g~C~~~~~~-~~~~C~C~~Gy~ 97 (429)
..|.+ .|+ +++ ++|+|.|++||.
T Consensus 7 ggC~~--~C~--n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 7 GRCEQ--FCK--NSADNKVVCSCTEGYR 30 (59)
T ss_dssp GGCSS--EEE--ECSTTCEEEECCTTEE
T ss_pred CCcCC--EeE--eCCCCCEEeeCCCCcE
Confidence 34555 799 888 699999999998
No 148
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=79.37 E-value=0.65 Score=42.70 Aligned_cols=57 Identities=21% Similarity=0.447 Sum_probs=37.4
Q ss_pred CCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCCCCCC-------CCC---CCCCCCCCCeEeeCCCCCC
Q psy11059 18 PCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETPISNQ-------ICT---TAPPCLNGATCRPQLTEQL 87 (429)
Q Consensus 18 ~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~~~~~-------~C~---~~~~C~~~g~C~~~~~~~~ 87 (429)
+|.++|+|. -.+|.|.+||. |..|+...+.. .|. ....|..+|+|+ -
T Consensus 197 ~C~g~G~~~-----CG~C~C~~g~~------------G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--C---- 253 (280)
T 2p26_A 197 LCHGKGFLE-----CGICRCDTGYI------------GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--C---- 253 (280)
T ss_dssp GGGGSEEEE-----TTEEEECTTEE------------STTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--T----
T ss_pred ccCCCCeEC-----CCceeCCCCCc------------CCcceecCCccccccccccCCCCCCCCccCCCceEe--C----
Confidence 477778877 45799999999 88887433210 364 123477788888 3
Q ss_pred eeeeCCCCCc
Q psy11059 88 YECVCPPGYK 97 (429)
Q Consensus 88 ~~C~C~~Gy~ 97 (429)
.+|+|.++|.
T Consensus 254 G~C~C~~~~~ 263 (280)
T 2p26_A 254 GQCLCHTSDV 263 (280)
T ss_dssp TEEEECCCSS
T ss_pred CeeECcCCCC
Confidence 2477766653
No 149
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=78.46 E-value=0.37 Score=49.82 Aligned_cols=44 Identities=27% Similarity=0.568 Sum_probs=20.7
Q ss_pred ccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCCCCcc
Q psy11059 335 FCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECS 384 (429)
Q Consensus 335 ~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 384 (429)
.|.++|.|..|.+ ...|.. .|..+|.|++. +|+|.+||+|..|.
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSSG-GGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccCCCcccccccc-cCCCCc-ccCCCcEECCC----CEeeCCCccCCCcC
Confidence 4455555555531 123332 35555555443 55555555555553
No 150
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=77.89 E-value=0.65 Score=38.52 Aligned_cols=36 Identities=31% Similarity=0.765 Sum_probs=24.1
Q ss_pred CCCCCCCC---CCCCCCCEEccCCCCeeeeCCCCCC----CCCCC
Q psy11059 385 ININECES---SPCLHGATCIDEVATFSCVCPKGLT----GRLCE 422 (429)
Q Consensus 385 ~~~~~C~~---~~C~~~~~C~~~~~~~~C~C~~g~~----G~~C~ 422 (429)
.++++|.. .+|. ..|.+..++|+|.|.+||+ |..|+
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 45667753 2454 3688888888888888887 55554
No 151
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=72.58 E-value=0.97 Score=37.45 Aligned_cols=37 Identities=35% Similarity=0.661 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCCCeEeeCCCCCCeeeeCCCCCc
Q psy11059 55 SIHCETPISNQICTT--APPCLNGATCRPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 55 G~~C~~~~~~~~C~~--~~~C~~~g~C~~~~~~~~~~C~C~~Gy~ 97 (429)
......+++ +|.. ..+|.+ .|+ +..++|+|.|++||+
T Consensus 110 ~~y~~~d~~--eC~~~~~~~C~~--~C~--n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 110 AYYVATDIN--ECTDFVDVPCSH--FCN--NFIGGYFCSCPPEYF 148 (159)
T ss_dssp EEEEEEECC--TTTC-CCCCSSS--EEE--EETTEEEEECCTTCE
T ss_pred eeeecccCc--ccCCCCCCCCCC--ccc--CcCCCEEEecCCCcE
Confidence 334444667 8873 245754 799 889999999999998
No 152
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=70.87 E-value=1.5 Score=41.41 Aligned_cols=28 Identities=29% Similarity=0.802 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCCeEeeCCCCCCeeeeCCCCCc
Q psy11059 66 ICTTAPPCLNGATCRPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 66 ~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy~ 97 (429)
||.....|.+ .|+ ++.++|+|.|++||.
T Consensus 3 ec~~~~~C~~--~C~--n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 3 ECAEEGYCSQ--GCT--NSEGAFQCWCEAGYE 30 (349)
T ss_dssp ------CCSS--EEC--CC---CCEECCTTEE
T ss_pred ccCCCCCCcC--eee--cCCCCeEEECCCCcc
Confidence 6764566877 899 999999999999998
No 153
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=54.69 E-value=2.8 Score=40.09 Aligned_cols=26 Identities=35% Similarity=0.734 Sum_probs=22.2
Q ss_pred CCCCCCCCCCCCCEeccCCCCceEEecCCCCccc
Q psy11059 11 PCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVC 44 (429)
Q Consensus 11 ~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~ 44 (429)
+| ++.|+.||.|+ +.+|.|.+||.|.
T Consensus 193 ~C---p~~CsGhG~C~-----~g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 193 PC---PSYCSGHGDCI-----SGVCFCDLGYTAA 218 (387)
T ss_dssp CC---GGGGGGSEEEE-----TTEEEECTTEEEE
T ss_pred cC---ccccCCCceec-----CCeEEecCCcccC
Confidence 57 78999999998 3589999999943
No 154
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=52.00 E-value=6.2 Score=35.96 Aligned_cols=28 Identities=29% Similarity=0.829 Sum_probs=23.4
Q ss_pred CCC-C-CCCCCCCCeEeeCCCCCCeeeeCCCCCc
Q psy11059 66 ICT-T-APPCLNGATCRPQLTEQLYECVCPPGYK 97 (429)
Q Consensus 66 ~C~-~-~~~C~~~g~C~~~~~~~~~~C~C~~Gy~ 97 (429)
||. . ...|.+ .|+ ++.++|+|.|.+||.
T Consensus 4 eC~~~~~~~C~~--~C~--~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 4 ECHPERTDGCQH--FCL--PGQESYTCSCAQGYR 33 (283)
T ss_dssp CCCSSCSSSCSS--BCC--CCTTSCCCBCCTTEE
T ss_pred ccCCCCCCCCCC--Eee--CCCCCeEecCCCCcc
Confidence 787 2 357776 799 999999999999998
No 155
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=51.68 E-value=4.3 Score=42.01 Aligned_cols=32 Identities=28% Similarity=0.847 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCC
Q psy11059 10 SPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETP 61 (429)
Q Consensus 10 ~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~ 61 (429)
..| +..|++||.|+ ..+|.|.+||+ |..|...
T Consensus 535 ~~C---p~~C~ghG~C~-----~G~C~Cd~G~~------------G~~C~~~ 566 (725)
T 2e26_A 535 DGC---LDMCSGHGRCV-----QGSCVCDEQWG------------GLYCDEP 566 (725)
T ss_dssp SCS---SGGGGGSEEEE-----TTEEEECTTEE------------STTSCEE
T ss_pred CCC---CcccCCCcEEC-----CCCEeeCCCcc------------CCCcCcc
Confidence 456 67899999999 45899999999 9999755
No 156
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=50.65 E-value=6 Score=39.86 Aligned_cols=66 Identities=18% Similarity=0.307 Sum_probs=36.4
Q ss_pred CCCCCEeccCCCCceEEecCCCCccc--ccccccCcCCCCCCCCCCCCCCCCCCCCCCCCCeEeeCCCCCCeeeeCCCCC
Q psy11059 19 CQNGGKCNEDETGNYDCTCDALHTVC--CVGLANQTLGSIHCETPISNQICTTAPPCLNGATCRPQLTEQLYECVCPPGY 96 (429)
Q Consensus 19 C~~~g~C~~~~~~~~~C~C~~g~~g~--~~~~~~~~~~G~~C~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~Gy 96 (429)
|...|..+ .. ..+|.|.+||.+. .+..|..++...... + . .|. +|..+.. ....+++.|.|..||
T Consensus 252 C~~dG~w~-~p--~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~-~-~--~C~---~CP~~S~---s~~~Gs~~C~C~ng~ 318 (536)
T 3fl7_A 252 CAVDGEWL-VP--IGQCLCQAGYEKVEDACQACSPGFFKFEAS-E-S--PCL---ECPEHTL---PSPEGATSCECEEGF 318 (536)
T ss_dssp ECTTSCBC-CC--BCCCEECTTEEEETTEEEECCTTEECCSCC-S-S--CCE---ECCSSEE---CCCTTCSSCEECTTC
T ss_pred EcCCCCEe-cc--cCcEeccCccccCCceeeecCCCCCcccCC-C-C--ccc---cCCCCCC---CCCCCccEEEEeccc
Confidence 55555554 22 3589999999844 223333333222211 0 0 232 3444332 245689999999999
Q ss_pred c
Q psy11059 97 K 97 (429)
Q Consensus 97 ~ 97 (429)
.
T Consensus 319 ~ 319 (536)
T 3fl7_A 319 F 319 (536)
T ss_dssp B
T ss_pred c
Confidence 8
No 157
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=49.61 E-value=6.4 Score=42.49 Aligned_cols=37 Identities=30% Similarity=0.652 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCCCCEeccCCCCceEEecCCCCcccccccccCcCCCCCCCCC
Q psy11059 10 SPCDAQRNPCQNGGKCNEDETGNYDCTCDALHTVCCVGLANQTLGSIHCETP 61 (429)
Q Consensus 10 ~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~g~~g~~~~~~~~~~~G~~C~~~ 61 (429)
+.| .-+||+|+|+++ .......|.|++||. |..|+..
T Consensus 498 ~~c--~C~PC~ngg~~~-l~g~~C~C~C~~g~~------------G~~Ce~~ 534 (913)
T 3t5o_A 498 DPC--QCAPCPNNGRPT-LSGTECLCVCQSGTY------------GENCEKQ 534 (913)
T ss_dssp CGG--GSCCBTTTBEEE-EETTEEEEECCTTBC------------STTSCCB
T ss_pred ccc--cCCCCCCCCEee-cCCCceEEEccCCcc------------ccCccCc
Confidence 456 345999999999 777788999999999 7777754
No 158
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=47.90 E-value=13 Score=37.35 Aligned_cols=58 Identities=26% Similarity=0.628 Sum_probs=37.5
Q ss_pred CCeeeeCCCCcc--CCCCcccccCCCccCCCCccCCCcCCCCCcCCCCccccCCCceEEecCCCCCC
Q psy11059 316 HRFNCTCPSGYH--GKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSG 380 (429)
Q Consensus 316 ~~~~C~C~~G~~--G~~C~~C~C~~g~~g~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 380 (429)
..+.|.|.+||. +..|+ .|++||+..... ...|. +|..+.. ....|++.|.|..||..
T Consensus 261 p~G~C~C~~G~e~~~~~C~--aC~~g~~k~~~~--~~~C~--~CP~~S~-s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 261 PIGQCLCQAGYEKVEDACQ--ACSPGFFKFEAS--ESPCL--ECPEHTL-PSPEGATSCECEEGFFR 320 (536)
T ss_dssp CBCCCEECTTEEEETTEEE--ECCTTEECCSCC--SSCCE--ECCSSEE-CCCTTCSSCEECTTCBC
T ss_pred ccCcEeccCccccCCceee--ecCCCCCcccCC--CCccc--cCCCCCC-CCCCCccEEEEeccccc
Confidence 357899999997 55555 588888755432 12343 3443332 33458899999999863
No 159
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=47.25 E-value=7.9 Score=39.82 Aligned_cols=32 Identities=22% Similarity=0.544 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCCCCEeccCCC-CceEEecCCCCc
Q psy11059 8 LSSPCDAQRNPCQNGGKCNEDET-GNYDCTCDALHT 42 (429)
Q Consensus 8 ~~~~C~~~~~~C~~~g~C~~~~~-~~~~C~C~~g~~ 42 (429)
.+|||+.....|+. .|+ +.+ ++|+|.|++||.
T Consensus 264 ~~n~C~~~ng~C~~--~C~-~~~~~~~~C~C~~g~~ 296 (628)
T 4a0p_A 264 GWNECASSNGHCSH--LCL-AVPVGGFVCGCPAHYS 296 (628)
T ss_dssp CCCTTTTTGGGCSS--EEE-EETTTEEEEECSTTCE
T ss_pred cceEeccCCCCcch--hhh-cCCCCCeeEEcCCCcE
Confidence 46788543445655 788 777 999999999998
No 160
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=47.11 E-value=12 Score=34.66 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=20.0
Q ss_pred EeccCCCC--ceEEecCCCCcccccccccCcCCCCCCC
Q psy11059 24 KCNEDETG--NYDCTCDALHTVCCVGLANQTLGSIHCE 59 (429)
Q Consensus 24 ~C~~~~~~--~~~C~C~~g~~g~~~~~~~~~~~G~~C~ 59 (429)
.|. ..++ +|+|.|+.||. ...+|..|.
T Consensus 280 ~C~-~~~~~~~~~C~C~~g~~--------l~~d~~~c~ 308 (318)
T 3sov_A 280 LCL-MSPVKPFYQCACPTGVK--------LLENGKTCK 308 (318)
T ss_dssp EEE-ECSSTTSEEEECSTTCC--------BCTTSSCBC
T ss_pred EEe-cCCCCCCeEEECCCCCE--------ECCCCCCCC
Confidence 577 5544 79999999998 445677775
No 161
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=43.85 E-value=12 Score=37.27 Aligned_cols=28 Identities=21% Similarity=0.672 Sum_probs=23.2
Q ss_pred CCCCCCcEeccCCCCCeeEeCCCCCcCC
Q psy11059 233 NPCQNGGKCNEDETGNYDCTCDALHTGD 260 (429)
Q Consensus 233 ~~C~~~g~C~~~~~~~~~C~C~~g~~G~ 260 (429)
++|+.++.|+....+.|.|.|+.||.|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 4788888997667778899999999875
No 162
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=35.97 E-value=29 Score=37.41 Aligned_cols=39 Identities=31% Similarity=0.639 Sum_probs=31.8
Q ss_pred CCcCCCCCcCCCCccccCCCceEEecCCCCCCCCccCCC
Q psy11059 349 FDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSINI 387 (429)
Q Consensus 349 i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~ 387 (429)
.+.|.-.||.++++++.......|+|++||.|..|+...
T Consensus 497 ~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 497 FDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp TCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBC
T ss_pred cccccCCCCCCCCEeecCCCceEEEccCCccccCccCcc
Confidence 455655689999999887777899999999999997544
No 163
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=29.22 E-value=1.7e+02 Score=21.65 Aligned_cols=62 Identities=15% Similarity=0.402 Sum_probs=32.9
Q ss_pred CCCCCCCCCCEEeeCCCCe--eeccCCC----CCCCCCC---CCCCCCCCCCCCCcEeccCCCCCeeEeCCCC
Q psy11059 193 CTSNPCLNDGVCVDEVYKG--RYWELPE----IRDCTSN---PCLNDCVNPCQNGGKCNEDETGNYDCTCDAL 256 (429)
Q Consensus 193 C~~~~C~~~~~C~~~~~~~--C~C~~~g----~~~C~~~---~C~~~~c~~C~~~g~C~~~~~~~~~C~C~~g 256 (429)
|....|+.++.|.....+- |.| ..+ ...|... +|..+ -..|...|.|.......-.|.|...
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRC-llnykk~~~kCV~~~~~~C~~N-NGGCd~nA~C~~~~~~kIvC~C~~~ 77 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRC-LLYFKEDAGKCVPAPNMTCKDK-NGGCAPEAECKMNDKNEIVCKCTKE 77 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEE-CTTEEEETTEEEECTTCCTTTG-GGGSCTTSEEEECTTSCEEEECCST
T ss_pred cccCCCCCCcCeEEEcCCCEEEEE-ECCeEecCCEEEcCCCCCcccc-CCCcCCCcceeecCCCcEEEECCCC
Confidence 3334566667777644333 777 665 2222211 11110 0467888888544435677888765
No 164
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=27.88 E-value=50 Score=23.07 Aligned_cols=28 Identities=25% Similarity=0.754 Sum_probs=23.2
Q ss_pred CCCCCCCCCCCCCCEeccCCCCceEEecCC
Q psy11059 10 SPCDAQRNPCQNGGKCNEDETGNYDCTCDA 39 (429)
Q Consensus 10 ~~C~~~~~~C~~~g~C~~~~~~~~~C~C~~ 39 (429)
|+| ....|..+.+|+.+..+..+|.|+.
T Consensus 2 ~~C--~~~~C~~g~~C~~~~~~~~~C~C~~ 29 (74)
T 1lr7_A 2 ETC--ENVDCGPGKKCRMNKKNKPRCVCAP 29 (74)
T ss_dssp CCS--TTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCC--CCCcCcCCCEEeECCCCCeeecCCC
Confidence 678 7889999999996677778999953
No 165
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=20.10 E-value=66 Score=29.25 Aligned_cols=24 Identities=29% Similarity=0.794 Sum_probs=17.4
Q ss_pred CCCCCCeEeeCCC----CCCeeeeCCCCCc
Q psy11059 72 PCLNGATCRPQLT----EQLYECVCPPGYK 97 (429)
Q Consensus 72 ~C~~~g~C~~~~~----~~~~~C~C~~Gy~ 97 (429)
.|.+ .|.+... .++|+|.|+.||+
T Consensus 279 ~Cs~--~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 279 GCQY--LCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp GCSS--EEEECCCCSTTCCSEEEECCTTCE
T ss_pred CcCc--ccCCCccccCCCCCeEeeCCCCCE
Confidence 5655 8983321 3689999999998
Done!